BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013293
(446 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/446 (80%), Positives = 396/446 (88%), Gaps = 6/446 (1%)
Query: 1 MAEASAASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL 60
MAE AA E AP R VL+ISAGASHSVALLSG+IVCSWGRGEDGQLGHGDAEDR
Sbjct: 1 MAEDMAADE----VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP 56
Query: 61 SPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKA 120
SPTQLSALDGH+IVSVTCGADHT AYS+S M+VYSWGWGDFGRLGHGNSSDLFTPLPIKA
Sbjct: 57 SPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA 116
Query: 121 LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKM 180
LH +R+KQIACGDSHCLAVT+EGEVQSWGRNQNGQLGLG TEDSLVPQK+QAFEG+ IKM
Sbjct: 117 LHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKM 176
Query: 181 VAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHT 240
VAAGAEH+ AV EDG+LYGWGWGRYGNLGLGDR DRL+PE+V + EKM MVACGWRHT
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 236
Query: 241 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 300
ISVS SG LY+YGWSKYGQLGHGD +DHL+P +LEAL SFISQISGGWRHTMA+TSDGK
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 296
Query: 301 LYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGT 360
LYGWGWNKFGQVGVG+N+D CSPVQV+FP DQKVVQ+SCGWRHTLAVTER NVF+WGRGT
Sbjct: 297 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGT 356
Query: 361 NGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKYDPSSGKTWVSPSERYAVVPDDTVQ 420
NGQLG GES DRN PKIIE LS+DG+ GQ+I SS DPSSGK+WVSP+ERYAVVPD+T
Sbjct: 357 NGQLGIGESVDRNFPKIIEALSVDGASGQHIESSNIDPSSGKSWVSPAERYAVVPDET-- 414
Query: 421 GQTSVTGRGNGSEVSVPEGDVKRIRV 446
G T + +GNG ++SVP+ DVKR+R+
Sbjct: 415 GLTDGSSKGNGGDISVPQTDVKRVRI 440
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/429 (33%), Positives = 221/429 (51%), Gaps = 26/429 (6%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ G H+V +L V + G + GQLGH + R P Q+ ALD IV+V+CG HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 84 TAYSESCMQVYSWGWGDFGRLGH-GNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVE 142
A ++ QVY+WG G+LG G+ + P IK+L +++ Q+ACG H LA++
Sbjct: 97 LALNDKG-QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 143 GEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
EV WG+N+ GQLGLGT + PQ L++ G+ VAAG HS + G ++GWG
Sbjct: 156 SEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLG 261
++G LGL D NDR +P + ++ +K+V + CG HT +++ G ++++G YGQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 262 HGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWGWNKFGQVGVGDNVDH 320
H + P ++ L S +++I+ G +HT A V S G++Y +G GQ+G G +
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335
Query: 321 CSPVQVK---FPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKI 377
SP VK +P + + L + + F R +G G S +SP+
Sbjct: 336 KSPFTVKGNWYPYNGQ----------CLPDIDSEEYFCVKRIFSG--GDQSFSHYSSPQN 383
Query: 378 IEPLSLDGSKGQNIASSKYDPSSG--KTWVS-PSERYAVVPDDTVQGQTSVTGRGNGSEV 434
P D + N + + + W+S PS R+ V + + G S +G NGS +
Sbjct: 384 CGP--PDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFL 441
Query: 435 SVPEGDVKR 443
+V D R
Sbjct: 442 AVSNDDHYR 450
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 189/346 (54%), Gaps = 9/346 (2%)
Query: 39 IVCSWGRGEDGQLGHG--DAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSW 96
++C WG GQLG G D E L P + + V CG HT + VY+
Sbjct: 1 MLC-WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTC 58
Query: 97 GWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQL 156
G D G+LGH S P + AL + + ++CG++H LA+ +G+V +WG + +GQL
Sbjct: 59 GCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 157 GLGTTEDSL-VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLG-DRN 214
GL +E+ + VP+ +++ + I VA G HS+A+++ E++ WG +YG LGLG D
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 215 DRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQL 274
+ P+ + ++ + VA G H+ ++ SG ++ +G +K+GQLG D D VP L
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 275 EALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKV 334
++LR I I G HT A+T +G ++ +G +GQ+G +P +V + V
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 335 VQISCGWRHTLA-VTERQNVFSWGRGTNGQLGHGESSDRNSPKIIE 379
+I+CG +HT A V ++S+G G NGQLG G +S+R SP ++
Sbjct: 297 TEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 171/318 (53%), Gaps = 13/318 (4%)
Query: 96 WGWGDFGRLGHGNSSDLFTPLPIKA--LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQN 153
WG FG+LG G + P K+ + RV+ + CG H + V +G V + G N
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 154 GQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGL-GD 212
GQLG + P+++ A + +I V+ G H++A+ + G++Y WG G LGL G
Sbjct: 64 GQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121
Query: 213 RNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG-DFKDHLVP 271
+P + ++ ++V VACG+ H++++S + ++ +G +KYGQLG G D K P
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSP 181
Query: 272 CQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLD 331
L++L Q++ G H+ +T G ++GWG NKFGQ+G+ D D P +K
Sbjct: 182 QLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS 241
Query: 332 QKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNI 391
QK+V I CG HT A+T+ VF++G G GQLGH +S +P+ + L GS I
Sbjct: 242 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEI 299
Query: 392 A-----SSKYDPSSGKTW 404
A +S + PSSG+ +
Sbjct: 300 ACGRQHTSAFVPSSGRIY 317
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 135/246 (54%), Gaps = 4/246 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLS-PTQLSALDGHEIVSVTCG 79
++ +S G +H++AL V +WG DGQLG +E+ + P + +L +IV V CG
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT-PLPIKALHSLRVKQIACGDSHCLA 138
H+ A S++ +V+ WG +G+LG G T P +K+L + Q+A G +H
Sbjct: 146 YYHSLALSKAS-EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFV 204
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T+ G + WGRN+ GQLGL D VP L++ I + G +H+ A+ ++G ++
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVF 264
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTIS-VSSSGRLYSYGWSKY 257
+G G YG LG + + P KV + + +ACG +HT + V SSGR+YS+G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 258 GQLGHG 263
GQLG G
Sbjct: 325 GQLGTG 330
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
P + ++AG +HS L + WGR + GQLG D DR P L +L +IV + CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA- 138
DHT A ++ V+++G G +G+LGH ++S P + L V +IACG H A
Sbjct: 251 EDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAF 309
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
V G + S+G NGQLG G+T + P
Sbjct: 310 VPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
++ I G H+ AL V ++G G GQLGH ++P ++ L G + + CG
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGR 303
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
HT+A+ S ++YS+G G G+LG G++S+ +P +K
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 174/307 (56%), Gaps = 6/307 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ G H+V +L V + G + GQLGH + R P Q+ ALD IV+V+CG HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 84 TAYSESCMQVYSWGWGDFGRLG-HGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVE 142
A ++ QVY+WG G+LG G+ + P IK+L +++ Q+ACG H LA++
Sbjct: 97 LALNDKG-QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 143 GEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
EV WG+N+ GQLGLG + PQ +++ G+ VAAG HS + G ++GWG
Sbjct: 156 SEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLG 261
++G LGL D NDR +P + ++ +K+V + CG HT +++ G ++++G YGQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 262 HGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWGWNKFGQVGVGDNVDH 320
H + P ++ L S ++QI+ G +HT A V S G++Y +G GQ+G G +
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335
Query: 321 CSPVQVK 327
SP VK
Sbjct: 336 KSPFTVK 342
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 224/454 (49%), Gaps = 53/454 (11%)
Query: 39 IVCSWGRGEDGQLGHG--DAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSW 96
++C WG GQLG G D E L P + ++ V CG HT + VY+
Sbjct: 1 MLC-WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGT-VYTC 58
Query: 97 GWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQL 156
G D G+LGH S P + AL + + ++CG++H LA+ +G+V +WG + +GQL
Sbjct: 59 GCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 157 GLGTTEDSL-VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLG-DRN 214
GL +E+ + VP+ +++ + I VA G HS+A+++ E++ WG +YG LGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 215 DRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQL 274
+ P+ + ++ + VA G H+ ++ SG ++ +G +K+GQLG D D VP L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 275 EALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKV 334
++LR I I G HT A+T +G ++ +G +GQ+G +P +V + V
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 335 VQISCGWRHTLA-VTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEP--LSLDGSKGQNI 391
QI+CG +HT A V ++S+G G NGQLG G +S+R SP ++ S +G Q+I
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDI 356
Query: 392 ASSKY--------------------------------DPSSG---------KTWVS-PSE 409
S Y DPS + W+S PS
Sbjct: 357 GSEDYFCVKRIFSGGDQSFSHYSSPQSCGPPDDFRRSDPSKQIWTVNEALIQKWLSYPSG 416
Query: 410 RYAVVPDDTVQGQTSVTGRGNGSEVSVPEGDVKR 443
R+ V + + G S +G NGS ++V D R
Sbjct: 417 RFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR 450
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 133/246 (54%), Gaps = 4/246 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLG-HGDAEDRLSPTQLSALDGHEIVSVTCG 79
++ +S G +H++AL V +WG DGQLG G E P + +L +IV V CG
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT-PLPIKALHSLRVKQIACGDSHCLA 138
H+ A S++ +V+ WG +G+LG G T P IK+L + Q+A G +H
Sbjct: 146 YYHSLALSKAS-EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T+ G + WGRN+ GQLGL D VP L++ I + G +H+ A+ ++G ++
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVF 264
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTIS-VSSSGRLYSYGWSKY 257
+G G YG LG + + P KV + + +ACG +HT + V SSGR+YS+G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 258 GQLGHG 263
GQLG G
Sbjct: 325 GQLGTG 330
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
P + ++AG +HS L + WGR + GQLG D DR P L +L +IV + CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA- 138
DHT A ++ V+++G G +G+LGH ++S P + L V QIACG H A
Sbjct: 251 EDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAF 309
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
V G + S+G NGQLG G+T + P
Sbjct: 310 VPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
++ I G H+ AL V ++G G GQLGH ++P ++ L G + + CG
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGR 303
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
HT+A+ S ++YS+G G G+LG G++S+ +P +K
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 202 bits (513), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 173/307 (56%), Gaps = 6/307 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ G H+V +L V + G + GQLGH + R P Q+ ALD IV+V CG HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 84 TAYSESCMQVYSWGWGDFGRLG-HGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVE 142
A ++ QVY+WG G+LG G+ + P IK+L +++ Q+ACG H LA++
Sbjct: 97 LALNDKG-QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 143 GEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
EV WG+N+ GQLGLG + PQ +++ G+ VAAG HS + G ++GWG
Sbjct: 156 SEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLG 261
++G LGL D NDR +P + ++ +K+V + CG HT +++ G ++++G YGQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 262 HGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWGWNKFGQVGVGDNVDH 320
H + P ++ L S ++Q++ G +HT A V S G++Y +G GQ+G G +
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335
Query: 321 CSPVQVK 327
SP VK
Sbjct: 336 KSPFTVK 342
Score = 194 bits (494), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 224/454 (49%), Gaps = 53/454 (11%)
Query: 39 IVCSWGRGEDGQLGHG--DAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSW 96
++C WG GQLG G D E L P + ++ V CG HT + VY+
Sbjct: 1 MLC-WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGT-VYTC 58
Query: 97 GWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQL 156
G D G+LGH S P + AL + + +ACG++H LA+ +G+V +WG + +GQL
Sbjct: 59 GCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 157 GLGTTEDSL-VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLG-DRN 214
GL +E+ + VP+ +++ + I VA G HS+A+++ E++ WG +YG LGLG D
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 215 DRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQL 274
+ P+ + ++ + VA G H+ ++ SG ++ +G +K+GQLG D D VP L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 275 EALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKV 334
++LR I I G HT A+T +G ++ +G +GQ+G +P +V + V
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 335 VQISCGWRHTLA-VTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEP--LSLDGSKGQNI 391
Q++CG +HT A V ++S+G G NGQLG G +S+R SP ++ S +G Q+I
Sbjct: 297 TQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDI 356
Query: 392 ASSKY--------------------------------DPSSG---------KTWVS-PSE 409
S Y DPS + W+S PS
Sbjct: 357 GSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVNEALIQKWLSYPSG 416
Query: 410 RYAVVPDDTVQGQTSVTGRGNGSEVSVPEGDVKR 443
R+ V + + G S +G NGS +++ D R
Sbjct: 417 RFPVEIANEIDGTFSSSGCLNGSFLAISNDDHYR 450
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 134/246 (54%), Gaps = 4/246 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLG-HGDAEDRLSPTQLSALDGHEIVSVTCG 79
++ ++ G +H++AL V +WG DGQLG G E P + +L +IV V CG
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHG-NSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
H+ A S++ +V+ WG +G+LG G + +P IK+L + Q+A G +H
Sbjct: 146 YYHSLALSKAS-EVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFV 204
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T+ G + WGRN+ GQLGL D VP L++ I + G +H+ A+ ++G ++
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVF 264
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTIS-VSSSGRLYSYGWSKY 257
+G G YG LG + + P KV + + VACG +HT + V SSGR+YS+G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 258 GQLGHG 263
GQLG G
Sbjct: 325 GQLGTG 330
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
P + ++AG +HS L + WGR + GQLG D DR P L +L +IV + CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA- 138
DHT A ++ V+++G G +G+LGH ++S P + L V Q+ACG H A
Sbjct: 251 EDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAF 309
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
V G + S+G NGQLG G+T + P
Sbjct: 310 VPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ ++ I G H+ AL V ++G G GQLGH ++P ++ L G + V C
Sbjct: 242 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
G HT+A+ S ++YS+G G G+LG G++S+ +P +K
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 195 bits (496), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 178/312 (57%), Gaps = 8/312 (2%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
R V ++ G +HSV LL V + G GQLGH ++ P Q+ AL I+ V C
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVAC 91
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHSLRVKQIACGDSHCL 137
G H+ A S+ Q++SWG G G+LG + D + P I+ L+ + Q++CG+ HCL
Sbjct: 92 GESHSLALSDRG-QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 150
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLV-PQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
A+ +G+ +WG+N +GQLGLG S PQ++++ EG+ + VAAG HS A++ G
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSK 256
++GWG G LGL D DR P V + +K+V ++CG HT ++ SG ++++G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 257 YGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWGWNKFGQVGVG 315
GQLGH D + P ++ L S ++QI+ G +HT+A V S G +Y +G GQ+G G
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 316 D--NVDHCSPVQ 325
NV SPV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 165/286 (57%), Gaps = 11/286 (3%)
Query: 126 VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA 185
VK++ACG +H + + +GEV + G N GQLG + P+++ A I VA G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGE 93
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRL-IPEKVATVDREKMVMVACGWRHTISVS 244
HS+A+++ G+L+ WG G G LGL D + +P + ++++ ++ V+CG H ++++
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 245 SSGRLYSYGWSKYGQLGHG-DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYG 303
+ G+ +++G + +GQLG G +F P ++ +L ++Q++ G H+ A++ G ++G
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 304 WGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQ 363
WG N GQ+G+ D D SP VK QKVV ISCG HT +T+ VF++G G+ GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 364 LGHGESSDRNSPKIIEPLSLDGSKGQNIASSK-----YDPSSGKTW 404
LGH +D +P+ + L L GS+ IA + + PSSG +
Sbjct: 274 LGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
P+ ++AG +HS AL V WG GQLG D +DR SP + L ++V ++CG
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA- 138
+HT ++S V+++G G G+LGH + +D P + L V QIACG H LA
Sbjct: 251 EEHTAVLTKSG-GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF 309
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAF 173
V G + ++G GQLG G T + P ++ +
Sbjct: 310 VPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 189/348 (54%), Gaps = 6/348 (1%)
Query: 4 ASAASEAASTTAAP-FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSP 62
A A AAP F + G + + + + V + G G G+LG G+++D
Sbjct: 4011 AEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVL 4070
Query: 63 TQLSALDGHEIVSV--TCGAD-HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
T +SAL G + + +CG+D H+ A +ES +V+SWG GD+G+LGHGNS P I+
Sbjct: 4071 TVISALQGFVVTQLVTSCGSDGHSMALTESG-EVFSWGDGDYGKLGHGNSDRQRRPRQIE 4129
Query: 120 ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIK 179
AL V Q++CG H VT +G++ ++G G+LGLG T + +P+++ A EG I
Sbjct: 4130 ALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG 4189
Query: 180 MVAAGAEHSVAVAEDGEL-YGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWR 238
VA G H++AV+ DG + + +G G YG LGLG+ + P+K+ + + VACG +
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQ 4249
Query: 239 HTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSD 298
+++++ G +Y++G + L G ++H P Q+ L I ++ G HT+A+ S+
Sbjct: 4250 FSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN 4309
Query: 299 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLA 346
G +Y WG N GQ+G+G P V + V QIS G H+ A
Sbjct: 4310 GDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4357
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 195/369 (52%), Gaps = 13/369 (3%)
Query: 43 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFG 102
WG G GQL + + P +A + V CG + T ++ V + G G +G
Sbjct: 4002 WGAGRHGQLAEA-GRNVMVPA--AAPSFSQAQQVICGQNCTFVI-QANGTVLACGEGSYG 4057
Query: 103 RLGHGNSSDLFTPLPIKALHSLRVKQI--ACG-DSHCLAVTVEGEVQSWGRNQNGQLGLG 159
RLG GNS DL I AL V Q+ +CG D H +A+T GEV SWG G+LG G
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117
Query: 160 TTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIP 219
++ P++++A +G + ++ G +HS V DG+L+ +G G YG LGLG+ +++ +P
Sbjct: 4118 NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP 4177
Query: 220 EKVATVDREKMVMVACGWRHTISVSSSGRL-YSYGWSKYGQLGHGDFKDHLVPCQLEALR 278
E+V ++ ++ VACG HT++VS+ G + +++G YG+LG G+ P +++ L
Sbjct: 4178 ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLC 4237
Query: 279 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQIS 338
I +++ G + ++A+T DG +Y +G ++ + G +H P Q+ + ++
Sbjct: 4238 GIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVA 4297
Query: 339 CGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKYDP 398
G HTLA+ +V++WG + GQLG G ++ + EP + G +G+N+
Sbjct: 4298 VGAEHTLALASNGDVYAWGSNSEGQLGLGHTN-----HVREPTLVTGLQGKNVRQISAGR 4352
Query: 399 SSGKTWVSP 407
W +P
Sbjct: 4353 CHSAAWTAP 4361
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 182/378 (48%), Gaps = 18/378 (4%)
Query: 43 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFG 102
WG QL G E L P + + + + T + V + G G +G
Sbjct: 377 WGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIE---AGQYCTFVISTDGSVRACGKGSYG 433
Query: 103 RLGHGNSSDLFTPLPIKALHSLRVKQIACG---DSHCLAVTVEGEVQSWGRNQNGQLGLG 159
RLG G+S++ T + +K+++ D H LA T EGEV SWG G+LG G
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG 493
Query: 160 TTEDSLVPQKLQ-AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLI 218
+ P+ +Q +G + V+AG HS AV EDGELY WG G +G LG GD N R I
Sbjct: 494 NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI 553
Query: 219 PEKVATVDREKMVMVACGWRHTISVSSSGR-LYSYGWSKYGQLGHGDFKDHLVPCQLEAL 277
P V D + V+CG HTI++S GR ++S+G G+LGHGD P +EAL
Sbjct: 554 PTLVK--DISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEAL 611
Query: 278 RESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDN-VDHCSPVQVKFPLDQKVVQ 336
+ FI ++ G + ++A+TS G++Y WG +G G + P ++ ++V
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVD 669
Query: 337 ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKY 396
+S G H LA++ V++WG + GQ G G S+ I +P + G G I
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG----PITKPKKVSGLDGIAIQQISA 725
Query: 397 DPSSGKTWVS-PSERYAV 413
S W + P +R V
Sbjct: 726 GTSHSLAWTALPRDRQVV 743
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 161/278 (57%), Gaps = 3/278 (1%)
Query: 22 LLISAGAS-HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
L+ S G+ HS+AL V SWG G+ G+LGHG+++ + P Q+ AL G E+V ++CG
Sbjct: 4084 LVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGF 4143
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVT 140
H+ A S +++++G GD+GRLG GN+S+ P + AL ++ Q+ACG +H LAV+
Sbjct: 4144 KHS-AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Query: 141 VEGE-VQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYG 199
+G V ++G G+LGLG + PQK+ G+ IK VA G + SVA+ +DG +Y
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 200 WGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQ 259
+G R L G + P+++ + + VA G HT++++S+G +Y++G + GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4322
Query: 260 LGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 297
LG G P + L+ + QIS G H+ A T+
Sbjct: 4323 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 170/314 (54%), Gaps = 15/314 (4%)
Query: 1 MAEASAASEAASTTAAPFRPVLLISAGAS---HSVALLSGNIVCSWGRGEDGQLGHGDAE 57
+ +++ S T P R + +S+ H++A + V SWG G+ G+LGHG++
Sbjct: 437 LGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSS 496
Query: 58 DRLSPTQLS-ALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPL 116
+ P + L G +V V+ G H+ A +E ++Y+WG GDFGRLGHG+S+ P
Sbjct: 497 TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG-ELYTWGEGDFGRLGHGDSNSRNIPT 555
Query: 117 PIKALHSLRVKQIACGDSHCLAVTVEGE-VQSWGRNQNGQLGLGTTEDSLVPQKLQAFEG 175
+K + + V +++CG SH +A++ +G V S+G NG+LG G T P+ ++A +G
Sbjct: 556 LVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQG 613
Query: 176 VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRN-DRLIPEKVATVDREKMVMVA 234
+ I+ V AG++ S+A+ G++Y WG G LG G L P+ + + ++V V+
Sbjct: 614 MFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVS 671
Query: 235 CGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLV-PCQLEALRESFISQISGGWRHTM 293
G H +++S +Y++G + GQ G G+ + P ++ L I QIS G H++
Sbjct: 672 IGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Query: 294 AVTS---DGKLYGW 304
A T+ D ++ W
Sbjct: 732 AWTALPRDRQVVAW 745
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 147/271 (54%), Gaps = 5/271 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ +S G HS + S + ++G G+ G+LG G+ ++ P +++AL+G++I V CG
Sbjct: 4136 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGL 4195
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVT 140
+HT A S V+++G GD+G+LG GNS+ +P I L + +K++ACG +A+T
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4255
Query: 141 VEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGW 200
+G V ++G+++ L G + PQ++ GV I+ VA GAEH++A+A +G++Y W
Sbjct: 4256 KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315
Query: 201 GWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTIS-VSSSGRLYSYGWSKYGQ 259
G G LGLG N P V + + + ++ G H+ + + + G S Q
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVPLQ 4375
Query: 260 LGHGDFKDHLVPCQLEALRESFISQISGGWR 290
LG D VP Q ALRE I + R
Sbjct: 4376 LGLPD----TVPPQYGALREVSIHTVRARLR 4402
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 181/353 (51%), Gaps = 13/353 (3%)
Query: 15 AAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEI- 73
A F I AG + + + V + G+G G+LG GD+ ++ + +L+ I
Sbjct: 399 APSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 74 -VSVTCGAD-HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHSLRVKQIA 130
VS + G+D HT A++ +V+SWG GD+G+LGHGNSS P I+ L V ++
Sbjct: 459 KVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 131 CGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVA 190
G H AVT +GE+ +WG G+LG G + +P ++ V V+ G+ H++A
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIA 575
Query: 191 VAEDGE-LYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRL 249
+++DG ++ +G G G LG GD N P+ + + + V G + +++++S+G++
Sbjct: 576 LSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635
Query: 250 YSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKF 309
Y++G G + L P +E L + I +S G H +A++ D ++Y WG N
Sbjct: 636 YAWGCGACLGCGSSE-ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Query: 310 GQVGVGDNVDHCSPVQVKFPLDQKVV-QISCGWRHTL---AVTERQNVFSWGR 358
GQ G G++ + + LD + QIS G H+L A+ + V +W R
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 106/189 (56%), Gaps = 6/189 (3%)
Query: 196 ELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWS 255
++Y WG GR+G L RN ++P + + + V+ CG T + ++G + + G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-VMVPAAAPSFSQAQQVI--CGQNCTFVIQANGTVLACGEG 4054
Query: 256 KYGQLGHGDFKDHLVPCQLEALRESFISQI---SGGWRHTMAVTSDGKLYGWGWNKFGQV 312
YG+LG G+ D V + AL+ ++Q+ G H+MA+T G+++ WG +G++
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 313 GVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDR 372
G G++ P Q++ ++VVQ+SCG++H+ VT +F++G G G+LG G +S++
Sbjct: 4115 GHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174
Query: 373 NSPKIIEPL 381
P+ + L
Sbjct: 4175 KLPERVTAL 4183
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 6/196 (3%)
Query: 191 VAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLY 250
V+E E+Y WG L G + L P+ + + + G T +S+ G +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTI--EAGQYCTFVISTDGSVR 425
Query: 251 SYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQIS---GGWRHTMAVTSDGKLYGWGWN 307
+ G YG+LG GD + +L I ++S G HT+A T++G+++ WG
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG 485
Query: 308 KFGQVGVGDNVDHCSPVQVKFPLDQKVVQ-ISCGWRHTLAVTERQNVFSWGRGTNGQLGH 366
+G++G G++ P ++ PL KVV +S G+RH+ AVTE +++WG G G+LGH
Sbjct: 486 DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 367 GESSDRNSPKIIEPLS 382
G+S+ RN P +++ +S
Sbjct: 546 GDSNSRNIPTLVKDIS 561
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 190/373 (50%), Gaps = 13/373 (3%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG 99
V WG + QLG P+ L +V V G+ A + +VYS G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEG-KVYSCGEA 3020
Query: 100 DFGRLGHGNSSDLFTPLP--IKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQ 155
GRLG G SS P+P I AL S VK++A G H A+TV+G+V SWG +G+
Sbjct: 3021 TNGRLGLGMSSGT-VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079
Query: 156 LGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRND 215
LG + + P+ ++A + I+ +A G+ HS A+ GELY WG G YG LG GD
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3139
Query: 216 RLIPEKVATVDREKMVMVACGWR--HTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQ 273
+L P+ V + +++ VACG R T++++ G ++S+G +G+LG G + +P
Sbjct: 3140 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3199
Query: 274 LEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQK 333
+E L + QI G + ++A+T G ++ WG + ++G G +V P V+ +K
Sbjct: 3200 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 3259
Query: 334 VVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 393
+V ++ G H LAVT+ V++WG +GQ G+G ++ P +++ G +GQ I
Sbjct: 3260 IVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-----GLEGQKITR 3314
Query: 394 SKYDPSSGKTWVS 406
S W +
Sbjct: 3315 VACGSSHSVAWTT 3327
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 169/305 (55%), Gaps = 10/305 (3%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRN 151
+V+ WG D +LG S + P + L +L V Q+A G AVTVEG+V S G
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020
Query: 152 QNGQLGLGTTEDSL-VPQKLQAFEGVSIKMVA--AGAEHSVAVAEDGELYGWGWGRYGNL 208
NG+LGLG + ++ +P+++ A +K VA +G H+ A+ DG+++ WG G G L
Sbjct: 3021 TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 209 GLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDH 268
G R + P + + +++ +ACG H+ +++SSG LY++G +YG+LGHGD
Sbjct: 3081 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140
Query: 269 LVPCQLEALRESFISQISGGWR--HTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV 326
L P ++ L + Q++ G R T+A+T +G ++ WG FG++G G + P +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200
Query: 327 KFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGS 386
+ Q V QI CG + +LA+T+ V++WG+G +LGHG P+++E G
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE-----GL 3255
Query: 387 KGQNI 391
+G+ I
Sbjct: 3256 RGKKI 3260
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 179/331 (54%), Gaps = 6/331 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLS-PTQLSALDGHEI--VSVT 77
V+ ++ G+ A+ V S G +G+LG G + + P Q++AL + + V+V
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCL 137
G H TA + +V+SWG GD G+LGH + + P I+AL + R++ IACG SH
Sbjct: 3055 SGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAE--HSVAVAEDG 195
A+T GE+ +WG + G+LG G L P+ ++ G + VA G+ ++A+ ++G
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173
Query: 196 ELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWS 255
++ WG G +G LG G IP+ + ++ + + + CG + +++++ SG ++++G
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 256 KYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVG 315
Y +LGHG P +E LR I ++ G H +AVT G++Y WG N GQ G G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3293
Query: 316 DNVDHCSPVQVKFPLDQKVVQISCGWRHTLA 346
+ P V+ QK+ +++CG H++A
Sbjct: 3294 TTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 188/355 (52%), Gaps = 9/355 (2%)
Query: 43 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFG 102
WG GQLG + PT AL V + G + T + ++Y+ G+G G
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLI-GGEQTLFAVTADGKLYATGYGAGG 4017
Query: 103 RLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLGT 160
RLG G + + TP ++++ + +K++A G HCLA++ EGEV SWG ++G+LG G
Sbjct: 4018 RLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGN 4077
Query: 161 TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPE 220
P+ +++ G+ + VAAG HS V G+LY WG GRYG LG D D+L P+
Sbjct: 4078 RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK 4137
Query: 221 KVATVDREKMVMVACGW--RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALR 278
V + +++ +ACG T+ ++ ++S+G YG+LG G VP ++++L
Sbjct: 4138 LVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 4197
Query: 279 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS-PVQVKFPLDQKVVQI 337
+ ++ G + ++A+T G +Y WG + ++G G + DH P QV+ +KV+ I
Sbjct: 4198 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAI 4256
Query: 338 SCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIA 392
+ G H + TE V++WG GQLG G ++ P+++ +L G K +A
Sbjct: 4257 ATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA--ALQGKKVNRVA 4309
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 156/276 (56%), Gaps = 3/276 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ +G H+ AL V SWG G+DG+LGH + P + AL I + CG+ H+
Sbjct: 3053 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG--DSHCLAVTV 141
A + S ++Y+WG G++GRLGHG+++ P +K L RV Q+ACG D+ LA+T
Sbjct: 3113 AALTSSG-ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
EG V SWG G+LG G +E +PQ ++ G + + GA+ S+A+ + G ++ WG
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3231
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLG 261
G Y LG G P+ V + +K+V VA G H ++V+ SG++Y++G + +GQ G
Sbjct: 3232 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Query: 262 HGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 297
+G + P ++ L I++++ G H++A T+
Sbjct: 3292 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 150/279 (53%), Gaps = 3/279 (1%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVT 77
F + +++G H +AL S V SWG EDG+LGHG+ P + +L G E+V V
Sbjct: 4040 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4099
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG--DSH 135
G H+ + + +Y+WG G +GRLGH +S D P ++AL RV IACG D+
Sbjct: 4100 AGGAHSACVT-AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQ 4158
Query: 136 CLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDG 195
L +T + V SWG G+LG G ++ VP K+ + G+ + V G++ SVA+ + G
Sbjct: 4159 TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSG 4218
Query: 196 ELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWS 255
+Y WG G Y LG G + P +V + +K++ +A G H + + G +Y++G +
Sbjct: 4219 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4278
Query: 256 KYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA 294
GQLG G P + AL+ +++++ G HT+A
Sbjct: 4279 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 181/336 (53%), Gaps = 8/336 (2%)
Query: 16 APFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEI-- 73
A RPV LI G A+ + + + G G G+LG G E +PT L ++ I
Sbjct: 3985 ATLRPVQLI-GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKK 4043
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD 133
V+V G H A S S +VYSWG + G+LGHGN S P I++L + V +A G
Sbjct: 4044 VAVNSGGKHCLALS-SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4102
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA--EHSVAV 191
+H VT G++ +WG+ + G+LG +ED L P+ ++A +G + +A G+ ++ +
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162
Query: 192 AEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYS 251
+D ++ WG G YG LG G + +P K+ ++ +V V CG + +++++ SG +Y+
Sbjct: 4163 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4222
Query: 252 YGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFG 310
+G Y +LGHG DH+ P Q++ L+ + I+ G H + T DG++Y WG N G
Sbjct: 4223 WGKGDYHRLGHGS-DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEG 4281
Query: 311 QVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLA 346
Q+G G P V +KV +++CG HTLA
Sbjct: 4282 QLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 156/298 (52%), Gaps = 11/298 (3%)
Query: 58 DRLSPTQLSALDGHEIVSVTCGAD-HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPL 116
D L+P + L IV + +D H + +VYSWG GD GRLGHG++ L P
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 540
Query: 117 PIKALHSLR----VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQA 172
I A + V IACG ++ A+T EGE+ +WGR G+LG G++ED +P +
Sbjct: 541 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG 600
Query: 173 FEGVSIKMVAAGA--EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKM 230
+G+ + VA G+ ++AV E+G+++ WG G YG LG G + P+ + + +
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 231 VMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWR 290
+ V CG + +I+++ G++YS+G +LGHG + P LE L+ + ++ G
Sbjct: 661 IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGST 720
Query: 291 HTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFP-LDQK-VVQISCGWRHTLA 346
H +A+T D +++ WG N Q D + P P LD K +V I+CG + A
Sbjct: 721 HCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 128/227 (56%), Gaps = 1/227 (0%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ ++AG +HS + + + +WG+G G+LGH D+ED+L P + AL GH ++ + CG+
Sbjct: 4095 VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGS 4154
Query: 81 -DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAV 139
D T V+SWG GD+G+LG G S P+ I +L L V ++ CG +A+
Sbjct: 4155 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYG 199
T G V +WG+ +LG G+ + P+++Q +G + +A G+ H V EDGE+Y
Sbjct: 4215 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYT 4274
Query: 200 WGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSS 246
WG G LG G N P VA + +K+ VACG HT++ S+S
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 172/358 (48%), Gaps = 24/358 (6%)
Query: 60 LSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
+ P Q L ++ V C S + +VY+ + +SD+ P ++
Sbjct: 441 IGPIQCEGLASLGVMQVACAEKRFLILSRNG-RVYTQAY----------NSDMLAPQLVQ 489
Query: 120 ALHSLRVKQIACGDS--HCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVS 177
L S + +IA H LA+ GEV SWG G+LG G T P+ + AF G
Sbjct: 490 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ 549
Query: 178 ----IKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMV 233
+ +A G+ +S A+ +GELY WG G YG LG G D IP VA + K++ V
Sbjct: 550 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 609
Query: 234 ACGW--RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRH 291
ACG T++V+ +G+++S+G YG+LG G P +E L++ + ++ G +
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 669
Query: 292 TMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQ 351
++A+T DG++Y WG ++G G P ++ +KV+ ++ G H LA+TE
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDS 729
Query: 352 NVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKYDPSSGKTWVSPSE 409
V SW G+N Q H ++ P EP +L G ++I P+ W S SE
Sbjct: 730 EVHSW--GSNDQCQHFDTLRVTKP---EPTALPGLDSKHIVGIACGPAQSFAWSSCSE 782
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 166/318 (52%), Gaps = 25/318 (7%)
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEG 143
T++ S +V WG +G +++ P+ + L SL V Q+AC + L ++ G
Sbjct: 417 TSHKGSLQEVIGWGL-----IGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNG 471
Query: 144 EVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAE--HSVAVAEDGELYGWG 201
V + N D L PQ +Q +I +AA ++ H +A+A GE+Y WG
Sbjct: 472 RVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG 521
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDREK----MVMVACGWRHTISVSSSGRLYSYGWSKY 257
G G LG GD P+ ++ ++ +V +ACG ++ ++++ G LY++G Y
Sbjct: 522 CGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581
Query: 258 GQLGHGDFKDHLVPCQLEALRESFISQIS--GGWRHTMAVTSDGKLYGWGWNKFGQVGVG 315
G+LGHG +D +P + L+ + ++ G T+AVT +G+++ WG +G++G G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Query: 316 DNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSP 375
+ +P ++ D V+++ CG + ++A+T+ V+SWG+G N +LGHG P
Sbjct: 642 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Query: 376 KIIEPLSLDGSKGQNIAS 393
K++E L G K ++A+
Sbjct: 702 KLLE--GLQGKKVIDVAA 717
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 129/227 (56%), Gaps = 3/227 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ I+ G+++S A+ + + +WGRG G+LGHG +ED P ++ L G +++ V CG+
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 613
Query: 81 --DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
T A +E+ QV+SWG GD+G+LG G S TP I+ L L V ++ CG +A
Sbjct: 614 GDAQTLAVTENG-QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T +G+V SWG+ N +LG GT E P+ L+ +G + VAAG+ H +A+ ED E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSS 245
WG R + P + +D + +V +ACG + + SS
Sbjct: 733 SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWSS 779
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 132/241 (54%), Gaps = 9/241 (3%)
Query: 30 HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHE----IVSVTCGADHTTA 85
H +AL + V SWG G+ G+LGHGD P +SA G + +V + CG+ ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 86 YSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEG 143
+ ++Y+WG G++GRLGHG+S D P+ + L L+V +AC GD+ LAVT G
Sbjct: 567 ITAEG-ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 625
Query: 144 EVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWG 203
+V SWG G+LG G ++ P+ ++ + + + V G++ S+A+ +DG++Y WG G
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 685
Query: 204 RYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG 263
LG G P+ + + +K++ VA G H ++++ ++S W Q H
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHS--WGSNDQCQHF 743
Query: 264 D 264
D
Sbjct: 744 D 744
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 60/308 (19%)
Query: 143 GEVQSWGRNQNGQLG---------------LGT--------------------------- 160
G + WG N GQLG L T
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 161 ----------TEDSLVPQKLQAFEGVSIKMVA--AGAEHSVAVAEDGELYGWGWGRYGNL 208
TE P L++ + V IK VA +G +H +A++ +GE+Y WG G L
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 209 GLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDH 268
G G+R+ P + ++ ++V VA G H+ V+++G LY++G +YG+LGH D +D
Sbjct: 4074 GHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ 4133
Query: 269 LVPCQLEALRESFISQIS--GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS-PVQ 325
L P +EAL+ + I+ G T+ +T D ++ WG +G++G G + D C P++
Sbjct: 4134 LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS-DGCKVPMK 4192
Query: 326 VKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDG 385
+ VV++ CG + ++A+T+ V++WG+G +LGHG P+ ++ L G
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ--GLQG 4250
Query: 386 SKGQNIAS 393
K IA+
Sbjct: 4251 KKVIAIAT 4258
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 240 TISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDG 299
T+S SG +Y +G + GQLG + VP EAL Q+ GG + AVT+DG
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 300 KLYGWGWNKFGQVGVGDNVDHCSP-----VQVKFPLDQKVVQISCGWRHTLAVTERQNVF 354
KLY G+ G++G+G +P +Q F K V ++ G +H LA++ V+
Sbjct: 4007 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVF---IKKVAVNSGGKHCLALSSEGEVY 4063
Query: 355 SWGRGTNGQLGHGESSDRNSPKIIEPL 381
SWG +G+LGHG S + P++IE L
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESL 4090
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ V+ I+ G+ H V V +WG ++GQLG G P ++AL G ++ V C
Sbjct: 4251 KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVAC 4310
Query: 79 GADHTTAYSES 89
G+ HT A+S S
Sbjct: 4311 GSAHTLAWSTS 4321
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ ++ ++ GA H +A+ V +WG + GQ G+G PT + L+G +I V C
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 79 GADHTTAYS 87
G+ H+ A++
Sbjct: 3318 GSSHSVAWT 3326
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 190/373 (50%), Gaps = 13/373 (3%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG 99
V WG + QLG P+ L +V V G+ A + +VY+ G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEG-KVYACGEA 3019
Query: 100 DFGRLGHGNSSDLFTPLP--IKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQ 155
GRLG G SS P+P I AL S VK++A G H A+TV+G+V SWG +G+
Sbjct: 3020 TNGRLGLGISSGT-VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078
Query: 156 LGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRND 215
LG + + P+ ++A + I+ +A G+ HS A+ GELY WG G YG LG GD
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3138
Query: 216 RLIPEKVATVDREKMVMVACGWR--HTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQ 273
+L P+ V + +++ VACG R T++++ G ++S+G +G+LG G + +P
Sbjct: 3139 QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 3198
Query: 274 LEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQK 333
+E L + QI G + ++A+T G ++ WG + ++G G +V P V+ +K
Sbjct: 3199 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 3258
Query: 334 VVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 393
+V ++ G H LAVT+ V++WG +GQ G+G ++ P +++ G +GQ I
Sbjct: 3259 IVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-----GLEGQKITR 3313
Query: 394 SKYDPSSGKTWVS 406
S W +
Sbjct: 3314 VACGSSHSVAWTT 3326
Score = 168 bits (425), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 169/305 (55%), Gaps = 10/305 (3%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRN 151
+V+ WG D +LG S + P + L +L V Q+A G AVTVEG+V + G
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 3019
Query: 152 QNGQLGLGTTEDSL-VPQKLQAFEGVSIKMVA--AGAEHSVAVAEDGELYGWGWGRYGNL 208
NG+LGLG + ++ +P+++ A +K VA +G H+ A+ DG+++ WG G G L
Sbjct: 3020 TNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 209 GLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDH 268
G R + P + + +++ +ACG H+ +++SSG LY++G +YG+LGHGD
Sbjct: 3080 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139
Query: 269 LVPCQLEALRESFISQISGGWR--HTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV 326
L P ++ L + Q++ G R T+A+T +G ++ WG FG++G G + P +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199
Query: 327 KFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGS 386
+ Q V QI CG + +LA+T+ V++WG+G +LGHG P+++E G
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE-----GL 3254
Query: 387 KGQNI 391
+G+ I
Sbjct: 3255 RGKKI 3259
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 188/355 (52%), Gaps = 9/355 (2%)
Query: 43 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFG 102
WG GQLG + PT AL V + G + T + ++Y+ G+G G
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLI-GGEQTLFAVTADGKLYATGYGAGG 4015
Query: 103 RLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLGT 160
RLG G + + TP ++++ + +K++A G HCLA++ EGEV SWG ++G+LG G
Sbjct: 4016 RLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGN 4075
Query: 161 TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPE 220
P+ +++ G+ + VAAG HS V G+LY WG GRYG LG D D+L P+
Sbjct: 4076 RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK 4135
Query: 221 KVATVDREKMVMVACGW--RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALR 278
V + ++V +ACG T+ ++ ++S+G YG+LG G VP ++++L
Sbjct: 4136 LVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 4195
Query: 279 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS-PVQVKFPLDQKVVQI 337
+ ++ G + ++A+T G +Y WG + ++G G + DH P QV+ +KV+ I
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAI 4254
Query: 338 SCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIA 392
+ G H + TE V++WG GQLG G ++ P+++ +L G K +A
Sbjct: 4255 ATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA--ALQGKKVNRVA 4307
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 179/331 (54%), Gaps = 6/331 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLS-PTQLSALDGHEI--VSVT 77
V+ ++ G+ A+ V + G +G+LG G + + P Q++AL + + V+V
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCL 137
G H TA + +V+SWG GD G+LGH + + P I+AL + R++ IACG SH
Sbjct: 3054 SGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAE--HSVAVAEDG 195
A+T GE+ +WG + G+LG G L P+ ++ G + VA G+ ++A+ ++G
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172
Query: 196 ELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWS 255
++ WG G +G LG G IP+ + ++ + + + CG + +++++ SG ++++G
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3232
Query: 256 KYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVG 315
Y +LGHG P +E LR I ++ G H +AVT G++Y WG N GQ G G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Query: 316 DNVDHCSPVQVKFPLDQKVVQISCGWRHTLA 346
+ P V+ QK+ +++CG H++A
Sbjct: 3293 TTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 156/276 (56%), Gaps = 3/276 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ +G H+ AL V SWG G+DG+LGH + P + AL I + CG+ H+
Sbjct: 3052 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG--DSHCLAVTV 141
A + S ++Y+WG G++GRLGHG+++ P +K L RV Q+ACG D+ LA+T
Sbjct: 3112 AALTSSG-ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
EG V SWG G+LG G +E +PQ ++ G + + GA+ S+A+ + G ++ WG
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3230
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLG 261
G Y LG G P+ V + +K+V VA G H ++V+ SG++Y++G + +GQ G
Sbjct: 3231 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Query: 262 HGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 297
+G + P ++ L I++++ G H++A T+
Sbjct: 3291 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 150/279 (53%), Gaps = 3/279 (1%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVT 77
F + +++G H +AL S V SWG EDG+LGHG+ P + +L G E+V V
Sbjct: 4038 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4097
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG--DSH 135
G H+ + + +Y+WG G +GRLGH +S D P ++AL RV IACG D+
Sbjct: 4098 AGGAHSACVT-AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 4156
Query: 136 CLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDG 195
L +T + V SWG G+LG G ++ VP K+ + G+ + V G++ SVA+ + G
Sbjct: 4157 TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSG 4216
Query: 196 ELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWS 255
+Y WG G Y LG G + P +V + +K++ +A G H + + G +Y++G +
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 256 KYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA 294
GQLG G P + AL+ +++++ G HT+A
Sbjct: 4277 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 181/336 (53%), Gaps = 8/336 (2%)
Query: 16 APFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEI-- 73
A RPV LI G A+ + + + G G G+LG G E +PT L ++ I
Sbjct: 3983 ATLRPVQLI-GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKK 4041
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD 133
V+V G H A S S +VYSWG + G+LGHGN S P I++L + V +A G
Sbjct: 4042 VAVNSGGKHCLALS-SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4100
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA--EHSVAV 191
+H VT G++ +WG+ + G+LG +ED L P+ ++A +G + +A G+ ++ +
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Query: 192 AEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYS 251
+D ++ WG G YG LG G + +P K+ ++ +V V CG + +++++ SG +Y+
Sbjct: 4161 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4220
Query: 252 YGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFG 310
+G Y +LGHG DH+ P Q++ L+ + I+ G H + T DG++Y WG N G
Sbjct: 4221 WGKGDYHRLGHGS-DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEG 4279
Query: 311 QVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLA 346
Q+G G P V +KV +++CG HTLA
Sbjct: 4280 QLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 156/298 (52%), Gaps = 11/298 (3%)
Query: 58 DRLSPTQLSALDGHEIVSVTCGAD-HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPL 116
D L+P + L IV + +D H + +VYSWG GD GRLGHG++ L P
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 539
Query: 117 PIKALHSLR----VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQA 172
I A + V IACG ++ A+T EGE+ +WGR G+LG G++ED +P +
Sbjct: 540 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG 599
Query: 173 FEGVSIKMVAAGA--EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKM 230
+G+ + VA G+ ++AV E+G+++ WG G YG LG G + P+ + + +
Sbjct: 600 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 659
Query: 231 VMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWR 290
V V CG + +I+++ G++YS+G +LGHG + P LE L+ + ++ G
Sbjct: 660 VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGST 719
Query: 291 HTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFP-LDQK-VVQISCGWRHTLA 346
H +A+T D +++ WG N Q D + P P LD K +V I+CG + A
Sbjct: 720 HCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 128/227 (56%), Gaps = 1/227 (0%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ ++AG +HS + + + +WG+G G+LGH D+ED+L P + AL GH +V + CG+
Sbjct: 4093 VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGS 4152
Query: 81 -DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAV 139
D T V+SWG GD+G+LG G S P+ I +L L V ++ CG +A+
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYG 199
T G V +WG+ +LG G+ + P+++Q +G + +A G+ H V EDGE+Y
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYT 4272
Query: 200 WGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSS 246
WG G LG G N P VA + +K+ VACG HT++ S+S
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 167/318 (52%), Gaps = 25/318 (7%)
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEG 143
T++ S +V WG +G +++ P+ + L +L V QIAC + L ++ G
Sbjct: 416 TSHKGSLQEVIGWGL-----IGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNG 470
Query: 144 EVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAE--HSVAVAEDGELYGWG 201
V + N D+L PQ +Q +I +AA ++ H +A+A GE+Y WG
Sbjct: 471 RVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG 520
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDREK----MVMVACGWRHTISVSSSGRLYSYGWSKY 257
G G LG GD P+ ++ ++ +V +ACG ++ ++++ G LY++G Y
Sbjct: 521 CGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 580
Query: 258 GQLGHGDFKDHLVPCQLEALRESFISQIS--GGWRHTMAVTSDGKLYGWGWNKFGQVGVG 315
G+LGHG +D +P + L+ + ++ G T+AVT +G+++ WG +G++G G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Query: 316 DNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSP 375
+ +P ++ D VV++ CG + ++A+T+ V+SWG+G N +LGHG P
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Query: 376 KIIEPLSLDGSKGQNIAS 393
K++E L G K ++A+
Sbjct: 701 KLLE--GLQGKKVIDVAA 716
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 170/358 (47%), Gaps = 24/358 (6%)
Query: 60 LSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
+ P Q L + + C S + +VY+ + +SD P ++
Sbjct: 440 IGPIQCEGLANLGVTQIACAEKRFLILSRNG-RVYTQAY----------NSDTLAPQLVQ 488
Query: 120 ALHSLRVKQIACGDS--HCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVS 177
L S + +IA H LA+ GEV SWG G+LG G T P+ + AF G
Sbjct: 489 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ 548
Query: 178 ----IKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMV 233
+ +A G+ +S A+ +GELY WG G YG LG G D IP VA + K++ V
Sbjct: 549 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 608
Query: 234 ACGW--RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRH 291
ACG T++V+ +G+++S+G YG+LG G P +E L++ + ++ G +
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 292 TMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQ 351
++A+T DG++Y WG ++G G P ++ +KV+ ++ G H LA+TE
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDS 728
Query: 352 NVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKYDPSSGKTWVSPSE 409
V SW G+N Q H ++ P EP +L G ++I P+ W S SE
Sbjct: 729 EVHSW--GSNDQCQHFDTLRVTKP---EPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 133/250 (53%), Gaps = 5/250 (2%)
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGEL 197
A T+ +V WG N QLG VP + +++ VA G++ AV +G++
Sbjct: 2954 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 198 YGWGWGRYGNLGLGDRNDRL-IPEKVATVDRE--KMVMVACGWRHTISVSSSGRLYSYGW 254
Y G G LGLG + + IP ++ + K V V G RH +++ G+++S+G
Sbjct: 3014 YACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGE 3073
Query: 255 SKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV 314
G+LGH + P +EAL+ I I+ G H+ A+TS G+LY WG ++G++G
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH 3133
Query: 315 GDNVDHCSPVQVKFPLDQKVVQISCGWR--HTLAVTERQNVFSWGRGTNGQLGHGESSDR 372
GDN P VK L +V+Q++CG R TLA+T+ VFSWG G G+LG G S
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 373 NSPKIIEPLS 382
N P+ IE L+
Sbjct: 3194 NIPQNIERLN 3203
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 132/241 (54%), Gaps = 9/241 (3%)
Query: 30 HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHE----IVSVTCGADHTTA 85
H +AL + V SWG G+ G+LGHGD P +SA G + +V + CG+ ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 86 YSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEG 143
+ ++Y+WG G++GRLGHG+S D P+ + L L+V +AC GD+ LAVT G
Sbjct: 566 ITAEG-ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 624
Query: 144 EVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWG 203
+V SWG G+LG G ++ P+ ++ + + + V G++ S+A+ +DG++Y WG G
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684
Query: 204 RYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG 263
LG G P+ + + +K++ VA G H ++++ ++S W Q H
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHS--WGSNDQCQHF 742
Query: 264 D 264
D
Sbjct: 743 D 743
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 129/227 (56%), Gaps = 3/227 (1%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V+ I+ G+++S A+ + + +WGRG G+LGHG +ED P ++ L G +++ V CG+
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 612
Query: 81 --DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
T A +E+ QV+SWG GD+G+LG G S TP I+ L L V ++ CG +A
Sbjct: 613 GDAQTLAVTENG-QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T +G+V SWG+ N +LG GT E P+ L+ +G + VAAG+ H +A+ ED E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSS 245
WG R + P + +D + +V +ACG + + SS
Sbjct: 732 SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 60/308 (19%)
Query: 143 GEVQSWGRNQNGQLG---------------LGT--------------------------- 160
G + WG N GQLG L T
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 161 ----------TEDSLVPQKLQAFEGVSIKMVA--AGAEHSVAVAEDGELYGWGWGRYGNL 208
TE P L++ + V IK VA +G +H +A++ +GE+Y WG G L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 209 GLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDH 268
G G+R+ P + ++ ++V VA G H+ V+++G LY++G +YG+LGH D +D
Sbjct: 4072 GHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ 4131
Query: 269 LVPCQLEALRESFISQIS--GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS-PVQ 325
L P +EAL+ + I+ G T+ +T D ++ WG +G++G G + D C P++
Sbjct: 4132 LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS-DGCKVPMK 4190
Query: 326 VKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDG 385
+ VV++ CG + ++A+T+ V++WG+G +LGHG P+ ++ L G
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ--GLQG 4248
Query: 386 SKGQNIAS 393
K IA+
Sbjct: 4249 KKVIAIAT 4256
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 240 TISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDG 299
T+S SG +Y +G + GQLG + VP EAL Q+ GG + AVT+DG
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 300 KLYGWGWNKFGQVGVGDNVDHCSP-----VQVKFPLDQKVVQISCGWRHTLAVTERQNVF 354
KLY G+ G++G+G +P +Q F K V ++ G +H LA++ V+
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVF---IKKVAVNSGGKHCLALSSEGEVY 4061
Query: 355 SWGRGTNGQLGHGESSDRNSPKIIEPL 381
SWG +G+LGHG S + P++IE L
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESL 4088
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ V+ I+ G+ H V V +WG ++GQLG G P ++AL G ++ V C
Sbjct: 4249 KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVAC 4308
Query: 79 GADHTTAYSES 89
G+ HT A+S S
Sbjct: 4309 GSAHTLAWSTS 4319
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ ++ ++ GA H +A+ V +WG + GQ G+G PT + L+G +I V C
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 79 GADHTTAYS 87
G+ H+ A++
Sbjct: 3317 GSSHSVAWT 3325
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 156/276 (56%), Gaps = 3/276 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+++G H +AL + V +WG GEDG+LGHG+ P + L+G + + CG+ H+
Sbjct: 4141 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHS 4200
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG--DSHCLAVTV 141
A + S V +WG G +GRLGHG+S D P ++AL R IACG D+ L +T
Sbjct: 4201 AAITASG-HVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITD 4259
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
+ V SWG G+LG G ++ +P K+++ G+ + V G++ SVA+ + G +Y WG
Sbjct: 4260 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWG 4319
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLG 261
G + LG G + P+KVA + +K++ +A G H ++ S SG +Y++G + GQLG
Sbjct: 4320 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4379
Query: 262 HGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 297
G P + AL+ I +++ G HT+A+++
Sbjct: 4380 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 157/273 (57%), Gaps = 3/273 (1%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+ +G H++AL V SWG GEDG+LGHG+ P + AL +I V CG+ H+
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG--DSHCLAVTV 141
A S S ++Y+WG G++GRLGHG+++ P + AL RV Q+ACG D+ LA+T
Sbjct: 3138 AAIS-SQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTE 3196
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
+G V SWG G+LG G +E S P +++ G+ + + GA+ S+A+ GE++ WG
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 3256
Query: 202 WGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLG 261
G Y LG G P+ + + +++ VA G H ++V+ +G++Y++G + +GQ G
Sbjct: 3257 KGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316
Query: 262 HGDFKDHLVPCQLEALRESFISQISGGWRHTMA 294
G+ + P + L F+++++ G H++A
Sbjct: 3317 SGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 176/343 (51%), Gaps = 5/343 (1%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG 99
V WG + QLG PT + + + G+ S+ +VY+ G G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDG-KVYACGEG 3046
Query: 100 DFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLG 157
GRLG G + ++ P + L VK++A G H LA+T++G+V SWG ++G+LG
Sbjct: 3047 TNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3106
Query: 158 LGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRL 217
G P+ ++A I+ VA G+ HS A++ GELY WG G YG LG GD +L
Sbjct: 3107 HGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQL 3166
Query: 218 IPEKVATVDREKMVMVACGWR--HTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLE 275
P+ V + ++V VACG R T++++ G ++S+G +G+LG G + P ++E
Sbjct: 3167 KPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIE 3226
Query: 276 ALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVV 335
L + QI G + ++A+T G+++ WG + ++G G + P + ++V+
Sbjct: 3227 RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVI 3286
Query: 336 QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKII 378
++ G H LAVT+ V++WG +GQ G G + P ++
Sbjct: 3287 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALV 3329
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 153/280 (54%), Gaps = 3/280 (1%)
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD 133
V+V G H A + +VY+WG G+ G+LGHGN P ++ L+ + V IACG
Sbjct: 4139 VAVNSGGKHCLALTTEG-EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGS 4197
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA--EHSVAV 191
+H A+T G V +WG+ + G+LG G +ED L P+ ++A G +A G+ ++ +
Sbjct: 4198 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4257
Query: 192 AEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYS 251
+D ++ WG G YG LG G + +P K+ ++ +V V CG + +++++ SG +Y+
Sbjct: 4258 TDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYT 4317
Query: 252 YGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQ 311
+G + +LGHG P ++ AL+ I I+ G H +A + G++Y WG N GQ
Sbjct: 4318 WGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQ 4377
Query: 312 VGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQ 351
+G G P V + +V+++CG HTLA++ Q
Sbjct: 4378 LGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQ 4417
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 179/344 (52%), Gaps = 7/344 (2%)
Query: 43 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFG 102
WG GQLG + +PT AL V + G A + ++++ G+G G
Sbjct: 4054 WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDG-KLFATGYGSGG 4112
Query: 103 RLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLGT 160
RLG G S P + +L + VK++A G HCLA+T EGEV +WG ++G+LG G
Sbjct: 4113 RLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGN 4172
Query: 161 TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPE 220
P+ ++ G+S+ +A G+ HS A+ G + WG GRYG LG GD D+L P+
Sbjct: 4173 RMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK 4232
Query: 221 KVATVDREKMVMVACGW--RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALR 278
V + + + +ACG T+ ++ ++S+G YG+LG G +P ++E+L
Sbjct: 4233 LVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLA 4292
Query: 279 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS-PVQVKFPLDQKVVQI 337
+ ++ G + ++A+T G +Y WG F ++G G +VDH P +V +K++ I
Sbjct: 4293 GLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG-SVDHVRRPKKVAALQGKKIISI 4351
Query: 338 SCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 381
+ G H +A ++ V++WG GQLG G + P+++ L
Sbjct: 4352 ATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAAL 4395
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA-DH 82
I+ G++HS A+ + V +WG+G G+LGHGD+ED+L P + AL G+ + + CG+ D
Sbjct: 4193 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDA 4252
Query: 83 TTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVE 142
T V+SWG GD+G+LG G S P I++L L V ++ CG +A+T
Sbjct: 4253 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 4312
Query: 143 GEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGW 202
G V +WG+ +LG G+ + P+K+ A +G I +A G+ H VA ++ GE+Y WG
Sbjct: 4313 GAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGD 4372
Query: 203 GRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSS 246
G LG G P VA + + +V V CG HT+++S+S
Sbjct: 4373 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 4/242 (1%)
Query: 145 VQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGR 204
V WG N QLG VP Q + +A G++ V++DG++Y G G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 205 YGNLGLGDRNDRLIPEKVATVDRE--KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH 262
G LGLG ++ +P ++ + + K V V G +H ++++ G+++S+G + G+LGH
Sbjct: 3048 NGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3107
Query: 263 GDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS 322
G+ P +EALR I ++ G H+ A++S G+LY WG ++G++G GDN
Sbjct: 3108 GNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLK 3167
Query: 323 PVQVKFPLDQKVVQISCGWR--HTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEP 380
P V ++VVQ++CG R TLA+TE VFSWG G G+LG G S ++P IE
Sbjct: 3168 PKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 3227
Query: 381 LS 382
LS
Sbjct: 3228 LS 3229
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 135/236 (57%), Gaps = 9/236 (3%)
Query: 30 HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSES 89
H +A+ S + SWG GED +LGHGD R PT+++AL+ H + SV CG ++ A +
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI--T 684
Query: 90 C-MQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC--GDSHCLAVTVEGEVQ 146
C + +WG G + RLGHGNS D P + AL V +A GD+H LA+T EG V
Sbjct: 685 CGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 744
Query: 147 SWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYG 206
+WG G+LG G SL P +++ ++ V AG++ SVA++ +G+LY WG
Sbjct: 745 AWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKATCL 802
Query: 207 NLGLGDRNDR--LIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQL 260
L +R+ + +P V+++ +++V VA H +++SSSG ++ +G + Q+
Sbjct: 803 GHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 145/299 (48%), Gaps = 19/299 (6%)
Query: 72 EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIA- 130
+I V C S+ ++Y+W RL + PLP++ + IA
Sbjct: 573 QIKQVACCETQMLILSQEG-KLYTW------RLAKPEAE----PLPMEEVAHDVFISIAG 621
Query: 131 -CGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSV 189
C H LA+ SWG ++ +LG G T VP K+ A E ++ V G +S
Sbjct: 622 HCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 190 AVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGW--RHTISVSSSG 247
A+ G L WG G Y LG G+ +DR +P V + +V VA G H+++++S G
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 741
Query: 248 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWN 307
++++G YG+LG+G+ L P +E+L + ++ G + ++A++S+G+LY WG
Sbjct: 742 LVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSVALSSEGQLYTWGKA 799
Query: 308 K-FGQVGVGDNVDHCS-PVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQL 364
G V +V CS P V +++V ++ H LA++ VF WGR + Q+
Sbjct: 800 TCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 132/261 (50%), Gaps = 14/261 (5%)
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCL 137
C H A +S YSWG G+ RLGHG++ P I AL V+ + CG S+
Sbjct: 623 CEGRHFLAI-DSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA--EHSVAVAEDG 195
A+T G + +WGR +LG G ++D +P + A + VA G+ HS+A+ +G
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 741
Query: 196 ELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWS 255
++ WG G YG LG G+ N L P V ++ R + V G + ++++SS G+LY+ W
Sbjct: 742 LVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFA--GSQFSVALSSEGQLYT--WG 797
Query: 256 KYGQLGHGDFKDHL----VPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQ 311
K LGH + + VP + +L+ I ++ H +A++S G+++GWG N Q
Sbjct: 798 KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQ 857
Query: 312 V---GVGDNVDHCSPVQVKFP 329
+ V +P+ V P
Sbjct: 858 ICPASVSSEPLLRTPILVSLP 878
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 4/242 (1%)
Query: 145 VQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGR 204
+ WG N GQLG P +A + +A G + AV DG+L+ G+G
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4110
Query: 205 YGNLGLGDRNDRLIPEKVATVDRE--KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH 262
G LG+G + IP + ++ K V V G +H +++++ G +Y++G + G+LGH
Sbjct: 4111 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170
Query: 263 GDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS 322
G+ + P +E L ++ I+ G H+ A+T+ G + WG ++G++G GD+ D
Sbjct: 4171 GNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 4230
Query: 323 PVQVKFPLDQKVVQISCGW--RHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEP 380
P V+ L + + I+CG TL +T+ NV+SWG G G+LG G S P IE
Sbjct: 4231 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4290
Query: 381 LS 382
L+
Sbjct: 4291 LA 4292
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 105/182 (57%), Gaps = 7/182 (3%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA--D 81
+ G S+S A+ G + +WGRG +LGHG+++DR PT + AL H +V V G+
Sbjct: 673 VYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDA 732
Query: 82 HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTV 141
H+ A + + V++WG GD+G+LG+GN + P+ +++L RV+++ G +A++
Sbjct: 733 HSLALTSEGL-VFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSS 789
Query: 142 EGEVQSWGRNQ--NGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYG 199
EG++ +WG+ QL + + VP+ + + + I VA H +A++ GE++G
Sbjct: 790 EGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFG 849
Query: 200 WG 201
WG
Sbjct: 850 WG 851
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 6/199 (3%)
Query: 197 LYGWGWGRYGNLGLGDRNDRL-IPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWS 255
+YGWG G LG G R+ P + + V +A G + +V+ G+L++ G+
Sbjct: 4051 IYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4109
Query: 256 KYGQLGHGDFKDHLVPCQLEALRESFISQIS--GGWRHTMAVTSDGKLYGWGWNKFGQVG 313
G+LG G +P L +L+ F+ +++ G +H +A+T++G++Y WG + G++G
Sbjct: 4110 SGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG 4169
Query: 314 VGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRN 373
G+ + + P V+ V I+CG H+ A+T +V +WG+G G+LGHG+S D+
Sbjct: 4170 HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL 4229
Query: 374 SPKIIEPLSLDGSKGQNIA 392
PK++E +L G + +IA
Sbjct: 4230 RPKLVE--ALLGYRAIDIA 4246
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 178 IKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVA--C 235
IK VA + ++++G+LY W + P + V + + +A C
Sbjct: 574 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHDVFISIAGHC 623
Query: 236 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV 295
RH +++ S+ YS+G + +LGHGD VP ++ AL + + + G ++ A+
Sbjct: 624 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683
Query: 296 TSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGW--RHTLAVTERQNV 353
T G L WG + ++G G++ D P V D VV ++ G H+LA+T V
Sbjct: 684 TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 743
Query: 354 FSWGRGTNGQLGHGESSDRNSPKIIEPL 381
F+WG G G+LG+G + P ++E L
Sbjct: 744 FAWGDGDYGKLGNGNCNGSLQPILVESL 771
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 227 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQIS 286
R ++ VAC + +S G+LY++ +K P +E + I+
Sbjct: 571 RFQIKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHDVFISIA 620
Query: 287 GGW--RHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQ-ISCGWRH 343
G RH +A+ S+ Y WG + ++G GD P ++ L+Q VQ + CG +
Sbjct: 621 GHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIA-ALEQHCVQSVYCGCSY 679
Query: 344 TLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLS 382
+ A+T N+ +WGRGT +LGHG S DR+ P ++ LS
Sbjct: 680 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 718
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
R V+ ++ GA H +A+ V +WG + GQ G G+ P + LD + V C
Sbjct: 3283 RRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVAC 3342
Query: 79 GADHTTAY 86
G+ H+ A+
Sbjct: 3343 GSSHSIAW 3350
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 172/298 (57%), Gaps = 9/298 (3%)
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD 133
+ ++CG +HT A ++Y +G ++G+LG G+ + + P IKAL +VK ACG
Sbjct: 38 ICLSCGDEHT-AIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGR 96
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGV-SIKMVAAGAEHSVAVA 192
+H L T G V + G N GQLGLG T+D ++ F +IK ++AGA S A+
Sbjct: 97 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 156
Query: 193 EDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSY 252
EDG+L+ WG G +GL D+++ IP +V TV + + ++CG+ H+ V+ G LY++
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSNVCIPHEV-TVGK-PISWISCGYYHSAFVTMDGELYTF 214
Query: 253 GWSKYGQLGHGD--FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFG 310
G + G+LG + +H P ++ + E I Q++ G HT+ +T + +Y +G +FG
Sbjct: 215 GEPENGKLGLPNELLMNHRSPQRVLGIPERVI-QVACGGGHTVVLT-EKVVYAFGLGQFG 272
Query: 311 QVGVGDNVDHCS-PVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 367
Q+G+G + S P ++ DQK+ ISCG HT +TE ++++G G +G+LG G
Sbjct: 273 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLG 330
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 168/341 (49%), Gaps = 29/341 (8%)
Query: 22 LLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGAD 81
+ +S G H+ + N + +G GQLG G + PT + AL ++ CG +
Sbjct: 38 ICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRN 97
Query: 82 HTTAYSESCMQVYSWGWGDFGRLGHGNSSD--------LFTPLPIKALHSLRVKQIACGD 133
HT +++ VY+ G + G+LG G++ D FTP + +KQ++ G
Sbjct: 98 HTLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP-------ADTIKQLSAGA 149
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAE 193
+ A+T +G++ WG N GQ+GL + +P ++ G I ++ G HS V
Sbjct: 150 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFVTM 207
Query: 194 DGELYGWGWGRYGNLGLGDRNDRLI----PEKVATVDREKMVMVACGWRHTISVSSSGRL 249
DGELY +G G LGL N+ L+ P++V + E+++ VACG HT+ V + +
Sbjct: 208 DGELYTFGEPENGKLGLP--NELLMNHRSPQRVLGI-PERVIQVACGGGHTV-VLTEKVV 263
Query: 250 YSYGWSKYGQLGHGDFK-DHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNK 308
Y++G ++GQLG G F + P +E +++ I IS G HT +T G LY +G +
Sbjct: 264 YAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGR 323
Query: 309 FGQVGVG--DNVDHCSPVQVKFPLDQKVVQISCGWRHTLAV 347
G++G+G + + P L V I+CG H L
Sbjct: 324 HGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 145/258 (56%), Gaps = 14/258 (5%)
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHS 188
++CGD H VT ++ +G N GQLGLG+ + P ++A + +K+ A G H+
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDR-LIPEKVATVDREKMVMVACGWRHTISVSSSG 247
+ + G +Y G G LGLGD +DR + V + + ++ G + +++ G
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDG 159
Query: 248 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWN 307
+L+ +G + GQ+G D + +P ++ + IS IS G+ H+ VT DG+LY +G
Sbjct: 160 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKP--ISWISCGYYHSAFVTMDGELYTFGEP 217
Query: 308 KFGQVGVGDNV--DHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLG 365
+ G++G+ + + +H SP +V + ++V+Q++CG HT+ +TE+ V+++G G GQLG
Sbjct: 218 ENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVVLTEKV-VYAFGLGQFGQLG 275
Query: 366 HG----ESSDRNSPKIIE 379
G E+S+ PKIIE
Sbjct: 276 LGTFLFETSE---PKIIE 290
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 22/320 (6%)
Query: 5 SAASEAASTTAAPFRP--VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSP 62
S A+ T +P V L + G +H++ V + G +GQLG GD +DR +
Sbjct: 71 SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF 130
Query: 63 TQLSALD-GHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKAL 121
Q+ I ++ GA+ + A +E +++ WG G++G + S++ P
Sbjct: 131 HQIVFFTPADTIKQLSAGANTSAALTEDG-KLFMWGDNSEGQIGLEDKSNVCIP------ 183
Query: 122 HSLRVKQ----IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTT--EDSLVPQKLQAFEG 175
H + V + I+CG H VT++GE+ ++G +NG+LGL + PQ++
Sbjct: 184 HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 243
Query: 176 VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGD-RNDRLIPEKVATVDREKMVMVA 234
I+ VA G H+V + E +Y +G G++G LGLG + P+ + + +K+ ++
Sbjct: 244 RVIQ-VACGGGHTVVLTEKV-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHIS 301
Query: 235 CGWRHTISVSSSGRLYSYGWSKYGQLGHG--DFKDHLVPCQLEALRESFISQISGGWRHT 292
CG HT ++ G LY++G ++G+LG G +F + P + I+ G H
Sbjct: 302 CGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH- 360
Query: 293 MAVTSDGKLYGWGWNKFGQV 312
M V + +L KF V
Sbjct: 361 MLVFATPRLGTIDEPKFEDV 380
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 231 VMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWR 290
+ ++CG HT V+ + +LY +G + +GQLG G + P ++AL+ + + G
Sbjct: 38 ICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRN 97
Query: 291 HTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF--PLDQKVVQISCGWRHTLAVT 348
HT+ T G +Y G N GQ+G+GD D + Q+ F P D + Q+S G + A+T
Sbjct: 98 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD-TIKQLSAGANTSAALT 156
Query: 349 ERQNVFSWGRGTNGQLGHGESSD 371
E +F WG + GQ+G + S+
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSN 179
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 243 VSSSGRLYSYGWSKYGQLGHGDF--KDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 300
V +G ++++G +K+ + F K+ + C +S G HT VT + K
Sbjct: 8 VPDTGAVFTFGKTKFAENIPSKFWFKNDIPIC------------LSCGDEHTAIVTGNNK 55
Query: 301 LYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGT 360
LY +G N +GQ+G+G P +K +KV +CG HTL T+ V++ G
Sbjct: 56 LYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNN 115
Query: 361 NGQLGHGESSDRNS 374
GQLG G++ DR++
Sbjct: 116 EGQLGLGDTDDRDT 129
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 183/361 (50%), Gaps = 32/361 (8%)
Query: 39 IVCSWGRGEDGQLGHGD-AEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWG 97
+V + G+G+ GQLG G+ +R P +S + ++V G HT S+S QVYS+G
Sbjct: 36 LVLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSG-QVYSFG 92
Query: 98 WGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWG--RNQNGQ 155
D G LG S + +P K +V Q++ GDSH A+T +G V WG R+ NG
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGV 152
Query: 156 LG-LGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG----- 209
+G L + S+VP ++Q V + VA+G +H V + DG+LY G G G LG
Sbjct: 153 IGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPEL 210
Query: 210 LGDRNDR------LIPEKVATVDR-----EKMVMVACGWRHTISVSSSGRLYSYGWSKYG 258
+R R L+P+ V R + CG T ++S G +Y +G S Y
Sbjct: 211 FANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYH 270
Query: 259 QLGHGDFKDHLVPCQLEALRESFISQI--SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGD 316
QLG + +P L + + S S + SGG HT+ + S+GK Y G ++G++G+G+
Sbjct: 271 QLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGE 330
Query: 317 NVDHCS-PVQV-KFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNS 374
+ S P + + P V ++CG AVT+ VF+WG GTN QLG G+ D S
Sbjct: 331 GAEEKSIPTLISRLP---AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWS 387
Query: 375 P 375
P
Sbjct: 388 P 388
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 104/243 (42%), Gaps = 24/243 (9%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGH----------GDAEDRLSPTQLSALD 69
PV+ +++G H V L + + + G GE GQLG +RL + L
Sbjct: 173 PVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLK 232
Query: 70 -----GH-EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS 123
GH CGA T A S VY +G ++ +LG + F P + + +
Sbjct: 233 SRGSRGHVRFQDAFCGAYFTFAISHEG-HVYGFGLSNYHQLGTPGTESCFIPQNLTSFKN 291
Query: 124 LRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKM 180
+ G H + + EG+ S GR + G+LGLG E+ +P + VS
Sbjct: 292 STKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVS--S 349
Query: 181 VAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVM--VACGWR 238
VA GA AV +DG ++ WG G LG G D P ++ E V+ V+ G +
Sbjct: 350 VACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQ 409
Query: 239 HTI 241
HT+
Sbjct: 410 HTV 412
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 6/174 (3%)
Query: 27 GASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSV-TCGADHTTA 85
GA + A+ V +G QLG E P L++ V G H T
Sbjct: 248 GAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTV 307
Query: 86 YSESCMQVYSWGWGDFGRLGHGN-SSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGE 144
+S + YS G ++GRLG G + + P I L + V +ACG S AVT +G
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPA--VSSVACGASVGYAVTKDGR 365
Query: 145 VQSWGRNQNGQLGLGTTEDSLVPQKL--QAFEGVSIKMVAAGAEHSVAVAEDGE 196
V +WG N QLG G ED+ P ++ + E + V++G +H+V + +D E
Sbjct: 366 VFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKE 419
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 225 VDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQ 284
+ + K V V+ H + G + + G GQLG G+ L ++ E +
Sbjct: 17 IPKSKKVKVS----HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQA 72
Query: 285 ISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHT 344
+GG HT+ ++ G++Y +G N G +G +V+ V K L +KVVQ+S G HT
Sbjct: 73 EAGGM-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHT 131
Query: 345 LAVTERQNVFSWG--RGTNGQLG 365
A+T+ VF WG R NG +G
Sbjct: 132 AALTDDGRVFLWGSFRDNNGVIG 154
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 6 AASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQL 65
A ++ T + V ++ GAS A+ V +WG G + QLG G ED SP ++
Sbjct: 332 AEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Query: 66 --SALDGHEIVSVTCGADHTT 84
L+ ++SV+ G HT
Sbjct: 392 MGKQLENRVVLSVSSGGQHTV 412
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 155/283 (54%), Gaps = 10/283 (3%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD-SHCLAVTVEGEVQSWGR 150
+V+ +G LG G++ P ++AL ++K ++ G H L T +G V +WG
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGH 101
Query: 151 NQNGQLGLGTTEDSLVPQKLQAFEGVSIKMV---AAGAEHSVAVAEDGELYGWGWGRYGN 207
N QLG GTT + P +Q + IK V A G+ HS+A+A DGEL+ WG+ G
Sbjct: 102 NGYSQLGNGTTNQGIAP--VQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQ 159
Query: 208 LGLGDRNDRLIPEKVAT-VDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFK 266
+G G ++ P KV + +++V +ACG +++V SG +Y +G++ GQLG G+
Sbjct: 160 VGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNG 219
Query: 267 DHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV 326
+ L P ++ AL ++QI G+ HT+A+T +G LY WG N +GQ+G G + SP Q+
Sbjct: 220 NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI 279
Query: 327 KFPLDQKVVQISCGWRHTLAV-TERQNVFSWG--RGTNGQLGH 366
++ + +C HT A T+ +V+ WG RG + L H
Sbjct: 280 MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 153/272 (56%), Gaps = 6/272 (2%)
Query: 112 LFTPLPIKALHSLRVKQIACGDS--HCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
+FT L + S+R K G S + VT EV +G N + LG G + +LVP+K
Sbjct: 9 IFTLLSPQEAGSIR-KACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKK 67
Query: 170 LQAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVAT-VDR 227
L+A G IK ++ G+ H + EDG +Y WG Y LG G N + P +V T +
Sbjct: 68 LEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI 127
Query: 228 EKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQL-EALRESFISQIS 286
++++ VACG H++++++ G L+++G++ GQ+G G + P ++ L + I+
Sbjct: 128 KQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIA 187
Query: 287 GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLA 346
G +MAV G++YGWG+N GQ+G+G+N + +PV+V V QI CG+ HTLA
Sbjct: 188 CGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLA 247
Query: 347 VTERQNVFSWGRGTNGQLGHGESSDRNSPKII 378
+T+ +++WG T GQLG G ++ SP I
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI 279
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 154/296 (52%), Gaps = 7/296 (2%)
Query: 15 AAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIV 74
A R + A+ ++ + + V +G LG GD + L P +L AL G +I
Sbjct: 18 AGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIK 77
Query: 75 SVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQ---IAC 131
S++ G+ + VY+WG + +LG+G ++ P++ +L +KQ +AC
Sbjct: 78 SLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIA--PVQVCTNLLIKQVIEVAC 135
Query: 132 GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL-QAFEGVSIKMVAAGAEHSVA 190
G H +A+ +GE+ +WG N GQ+G G+T + P+K+ + +A G S+A
Sbjct: 136 GSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMA 195
Query: 191 VAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLY 250
V + GE+YGWG+ G LGLG+ ++L P +VA + + + CG+ HT++++ G LY
Sbjct: 196 VLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLY 255
Query: 251 SYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV-TSDGKLYGWG 305
++G + YGQLG G + L P Q+ +E I + HT A T G +Y WG
Sbjct: 256 AWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ V+ I+ G + S+A+L V WG +GQLG G+ ++L+P +++AL G + + C
Sbjct: 181 KRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVC 240
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
G HT A ++ + +Y+WG +G+LG G+ ++L +P I ++ AC +H A
Sbjct: 241 GYAHTLALTDEGL-LYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
Query: 139 VTVE-GEVQSWGR 150
+ G V WG+
Sbjct: 300 AKTQGGHVYMWGQ 312
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 166/299 (55%), Gaps = 8/299 (2%)
Query: 13 TTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHE 72
T +P +L ++G HS+ LL+ + V S G GQLG A+ P + AL+
Sbjct: 17 TAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLI 76
Query: 73 IVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDL-FTPLPIKALHSLRVKQIAC 131
+ V+CG +H+ A +V++WG G G+LG G ++ FTP I L+ +++ Q++C
Sbjct: 77 VDLVSCGKEHSLAVCHKG-RVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSC 135
Query: 132 GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV-PQKLQAFEGVSIKMVAAGAEHSVA 190
G H LA++ + +V SWG+N +GQLGLG S PQ++++ EG+ + VAAG HS A
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 195
Query: 191 VAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREK---MVMVACGWRHTISVSSSG 247
++ G +GWG G L L RN + K +V K +V ++CG HT ++ G
Sbjct: 196 LSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG 255
Query: 248 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWG 305
+++++G ++ GQLG+ + P QL + +SQI G HT+A V + G++ +G
Sbjct: 256 KVFTFGDNRSGQLGYSPTPEKRGP-QLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 152/271 (56%), Gaps = 15/271 (5%)
Query: 128 QIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEH 187
Q A G+ H L + V S G N GQLG + +P+ +QA E + + +V+ G EH
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 188 SVAVAEDGELYGWGWGRYGNLGLGDRND-RLIPEKVATVDREKMVMVACGWRHTISVSSS 246
S+AV G ++ WG G G LG+G+ + P+K+ T++ K++ V+CG H++++S
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKD 146
Query: 247 GRLYSYGWSKYGQLGHG-DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWG 305
+++S+G + +GQLG G +F P ++ +L ++Q++ G H+ A++ G +GWG
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 306 WNKFGQVGV-GDNVDHCSPVQVKFPL------DQKVVQISCGWRHTLAVTERQNVFSWGR 358
N GQ+ + G NV PVQ PL + VV ISCG HT +T+ VF++G
Sbjct: 207 SNSAGQLALSGRNV----PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGD 262
Query: 359 GTNGQLGHGESSDRNSPKIIEPLSLDGSKGQ 389
+GQLG+ + ++ P+++E +DG Q
Sbjct: 263 NRSGQLGYSPTPEKRGPQLVE--RIDGLVSQ 291
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 157/321 (48%), Gaps = 21/321 (6%)
Query: 70 GHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQI 129
G E++ G H+ + +V S G G+LG + P PI+AL +L V +
Sbjct: 22 GAELLQAASGERHSLLLLTN-HRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLV 80
Query: 130 ACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKMVAAGAEHS 188
+CG H LAV +G V +WG GQLG+G E S P+K+ + I V+ G HS
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHS 140
Query: 189 VAVAEDGELYGWGWGRYGNLGLG-DRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSG 247
+A+++D +++ WG +G LGLG + + P++V +++ + VA G H+ ++S G
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCG 200
Query: 248 RLYSYGWSKYGQL---GHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGW 304
+ +G + GQL G P + AL+ + IS G HT +T DGK++ +
Sbjct: 201 TSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTF 260
Query: 305 GWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQ- 363
G N+ GQ+G + P V+ +D V QI CG HTLA T GQ
Sbjct: 261 GDNRSGQLGYSPTPEKRGPQLVE-RIDGLVSQIDCGSYHTLAYVH----------TTGQV 309
Query: 364 --LGHGESSDRNSPKIIEPLS 382
GHG SD + P E L+
Sbjct: 310 VSFGHG-PSDTSKPTHPEALT 329
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Query: 175 GVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVA 234
G + A+G HS+ + + + G G LG +PE + ++ + +V+
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 235 CGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKD-HLVPCQLEALRESFISQISGGWRHTM 293
CG H+++V GR++++G GQLG G+FK+ P ++ L + I Q+S G H++
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSL 141
Query: 294 AVTSDGKLYGWGWNKFGQVGVGDNV-DHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQN 352
A++ D +++ WG N GQ+G+G SP +V+ + Q++ G H+ A++
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 353 VFSWGRGTNGQLGHGESSDRNSP-KIIEPLSLDGSKG 388
F WG + GQL S RN P + +PLS+ K
Sbjct: 202 SFGWGSNSAGQLA---LSGRNVPVQSNKPLSVGALKN 235
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDGHEIVSVTCG 79
++ +S G HS+AL + V SWG+ GQLG G + + SP ++ +L+G + V G
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 189
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRL---GHGNSSDLFTPLPIKALHSLRVKQIACGDSHC 136
H+ A S C + WG G+L G PL + AL +L V I+CGD+H
Sbjct: 190 GAHSFALS-LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248
Query: 137 LAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVA-VAEDG 195
+T +G+V ++G N++GQLG T + PQ ++ +G+ + + G+ H++A V G
Sbjct: 249 AVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTG 307
Query: 196 ELYGWGWG 203
++ +G G
Sbjct: 308 QVVSFGHG 315
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 182/361 (50%), Gaps = 32/361 (8%)
Query: 39 IVCSWGRGEDGQLGHGDAE-DRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWG 97
+V + G+G+ GQLG G++ +R P + L ++V G HT S+S QVYS+G
Sbjct: 36 LVLTLGQGDVGQLGLGESVLERKKPALVPLL--QDVVQAEAGGMHTVCLSQSG-QVYSFG 92
Query: 98 WGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWG--RNQNGQ 155
D G LG S + +P K +V Q++ GDSH A+T +G V WG R+ NG
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGV 152
Query: 156 LG-LGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG----- 209
+G L + S+VP ++Q + VA+G +H V + DG+LY G G G LG
Sbjct: 153 IGLLEPMKKSMVPVQVQL--DAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPEL 210
Query: 210 LGDRNDR------LIPEKV-----ATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYG 258
+R R L+P V T R + CG T ++S G +Y +G S Y
Sbjct: 211 FANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYH 270
Query: 259 QLGHGDFKDHLVPCQLEALRESFISQI--SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGD 316
QLG +P L + + S S + SGG HT+ + S+GK Y G ++G++G+G+
Sbjct: 271 QLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGE 330
Query: 317 NVDHCS-PVQV-KFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNS 374
+ S P + + P+ V ++CG AV++ VF+WG GTN QLG G+ D S
Sbjct: 331 GAEEKSIPTLISRLPV---VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWS 387
Query: 375 P 375
P
Sbjct: 388 P 388
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 102/243 (41%), Gaps = 24/243 (9%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGH----------GDAEDRLSPTQLSALD 69
PV+ +++G H V L + + + G GE GQLG RL + L
Sbjct: 173 PVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLK 232
Query: 70 GH------EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS 123
CGA T A S VY +G ++ +LG + F P + + +
Sbjct: 233 SRGTRGRVRFQDAFCGAYFTFAISREG-HVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKN 291
Query: 124 LRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKM 180
+ G H + + EG+ S GR + G+LGLG E+ +P + VS
Sbjct: 292 STKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVS--S 349
Query: 181 VAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVM--VACGWR 238
VA GA AV++DG ++ WG G LG G D P ++ E V+ V+ G +
Sbjct: 350 VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQ 409
Query: 239 HTI 241
HT+
Sbjct: 410 HTV 412
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 225 VDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGD-FKDHLVPCQLEALRESFIS 283
+ + K V V+ H + G + + G GQLG G+ + P + L++ +
Sbjct: 17 IPKSKKVKVS----HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VV 70
Query: 284 QISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRH 343
Q G HT+ ++ G++Y +G N G +G +V+ V K L +KVVQ+S G H
Sbjct: 71 QAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 344 TLAVTERQNVFSWG--RGTNGQLG 365
T A+TE VF WG R NG +G
Sbjct: 131 TAALTEDGRVFLWGSFRDNNGVIG 154
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSD------LFTPLPIKALHSLRVKQIACG 132
G H T +S + YS G ++GRLG G ++ L + LP+ V +ACG
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV-------VSSVACG 353
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL--QAFEGVSIKMVAAGAEHSVA 190
S AV+ +G V +WG N QLG G ED+ P ++ + E + V++G +H+V
Sbjct: 354 ASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVL 413
Query: 191 VAED 194
+ +D
Sbjct: 414 LVKD 417
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 7 ASEAASTTAAPFRPVLL-ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQL 65
A E + T PV+ ++ GAS A+ V +WG G + QLG G ED SP ++
Sbjct: 332 AEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Query: 66 SA--LDGHEIVSVTCGADHTT 84
+ L+ +++V+ G HT
Sbjct: 392 TGKQLENRVVLTVSSGGQHTV 412
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 171/302 (56%), Gaps = 9/302 (2%)
Query: 76 VTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSH 135
++CG +HT + ++Y +G ++G+LG G+ S + P +KAL +VK ACG +H
Sbjct: 40 LSCGDEHTAVVT-GNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNH 98
Query: 136 CLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGV-SIKMVAAGAEHSVAVAED 194
L T G+V + G N GQLGLG TE+ + F IK ++AG+ S A+ ED
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158
Query: 195 GELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGW 254
GEL+ WG G +GL + + +P++V TV + + ++CG+ H+ V++ G+LY++G
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQV-TVGK-PISWISCGYYHSAFVTTEGQLYTFGE 216
Query: 255 SKYGQLGHGD--FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQV 312
+ G+LG + +H +P + + + Q++ G HT+ +T +Y +G +FGQ+
Sbjct: 217 PECGKLGLPNQLLVNHRMPQPVPGIPGKVV-QVACGGGHTVVLTEKA-VYTFGLGQFGQL 274
Query: 313 GVGDNVDHCS-PVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSD 371
G+G + S P ++ DQK+ I+CG HT +T+ ++++G G +G+LG G +
Sbjct: 275 GLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENS 334
Query: 372 RN 373
N
Sbjct: 335 TN 336
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 170/332 (51%), Gaps = 13/332 (3%)
Query: 23 LISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADH 82
+S G H+ + N + +G GQLG G PT + AL ++ CG +H
Sbjct: 39 FLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNH 98
Query: 83 TTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTV 141
T +E +VY+ G + G+LG G++ + T I S R +KQ++ G + A+T
Sbjct: 99 TLVSTEGG-KVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
+GE+ WG N GQ+GL + VPQ++ G I ++ G HS V +G+LY +G
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTFG 215
Query: 202 WGRYGNLGLGDR---NDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYG 258
G LGL ++ N R+ P+ V + K+V VACG HT+ ++ +Y++G ++G
Sbjct: 216 EPECGKLGLPNQLLVNHRM-PQPVPGIPG-KVVQVACGGGHTVVLTEKA-VYTFGLGQFG 272
Query: 259 QLGHGDFK-DHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVG-- 315
QLG G F + VP +E +++ IS I+ G HT +T G +Y +G + G++G+G
Sbjct: 273 QLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLE 332
Query: 316 DNVDHCSPVQVKFPLDQKVVQISCGWRHTLAV 347
++ + P L V +SCG HTL
Sbjct: 333 NSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVF 364
Score = 118 bits (295), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 138/256 (53%), Gaps = 10/256 (3%)
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHS 188
++CGD H VT ++ +G N GQLGLG+ P ++A + +K A G H+
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVA-TVDREKMVMVACGWRHTISVSSSG 247
+ E G++Y G G LGLGD +R ++ + K+ ++ G + +++ G
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159
Query: 248 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWN 307
L+ +G + GQ+G + + VP Q+ + IS IS G+ H+ VT++G+LY +G
Sbjct: 160 ELFMWGDNSEGQIGLENVTNVCVPQQVTVGKP--ISWISCGYYHSAFVTTEGQLYTFGEP 217
Query: 308 KFGQVGVGDN--VDHCSPVQVKFP-LDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQL 364
+ G++G+ + V+H P V P + KVVQ++CG HT+ +TE+ V+++G G GQL
Sbjct: 218 ECGKLGLPNQLLVNHRMPQPV--PGIPGKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQL 274
Query: 365 GHGESSDRNS-PKIIE 379
G G S PK IE
Sbjct: 275 GLGTFLFETSVPKAIE 290
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 145/299 (48%), Gaps = 11/299 (3%)
Query: 5 SAASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQ 64
S S+ A V + G +H++ G V + G +GQLG GD E+R +
Sbjct: 73 STVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHL 132
Query: 65 LSALDGH-EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS 123
+S +I ++ G++ + A +E +++ WG G++G N +++ P +
Sbjct: 133 ISFFTSQRKIKQLSAGSNTSAALTEDG-ELFMWGDNSEGQIGLENVTNVCVPQQVTV--G 189
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTT--EDSLVPQKLQAFEGVSIKMV 181
+ I+CG H VT EG++ ++G + G+LGL + +PQ + G ++ V
Sbjct: 190 KPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-V 248
Query: 182 AAGAEHSVAVAEDGELYGWGWGRYGNLGLGD-RNDRLIPEKVATVDREKMVMVACGWRHT 240
A G H+V + E +Y +G G++G LGLG + +P+ + + +K+ +ACG HT
Sbjct: 249 ACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHT 307
Query: 241 ISVSSSGRLYSYGWSKYGQLGHG--DFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 297
++ G +Y++G ++G+LG G + + +P + +S G HT+ +
Sbjct: 308 ALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFAT 366
Score = 32.0 bits (71), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 309 FGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGE 368
FG+ +N+ P + F D +SCG HT VT ++ +G GQLG G
Sbjct: 17 FGKTQFAENI----PSKFWFRNDVPTF-LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 369 SSDRNSPKIIEPLSLDGSK 387
S + P ++ L + K
Sbjct: 72 KSTVSKPTCVKALKPEKVK 90
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 184/361 (50%), Gaps = 32/361 (8%)
Query: 39 IVCSWGRGEDGQLGHGDAE-DRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWG 97
+V + G+G+ GQLG G++ +R P + L ++V G HT ++S QVYS+G
Sbjct: 36 LVLTLGQGDVGQLGLGESVLERKKPALVPLL--QDVVQAEAGGMHTVCLNQSG-QVYSFG 92
Query: 98 WGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWG--RNQNGQ 155
D G LG S + +P K +V Q++ GDSH A+T +G V WG R+ NG
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGV 152
Query: 156 LG-LGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG----- 209
+G L + S+VP ++Q + + VA+G +H V + DG+LY G G G LG
Sbjct: 153 IGLLEPMKKSMVPVQVQL--DMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPEL 210
Query: 210 LGDRNDR------LIPEKV-----ATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYG 258
+R R L+P+ V + R + CG T ++S G +Y +G S Y
Sbjct: 211 FANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYH 270
Query: 259 QLGHGDFKDHLVPCQLEALRESFISQI--SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGD 316
QLG +P L + + S S + SGG HT+ + S+GK Y G ++G++G+G+
Sbjct: 271 QLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGE 330
Query: 317 NVDHCS-PVQV-KFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNS 374
+ S P + + P+ V ++CG AV++ VF+WG GTN QLG G+ D S
Sbjct: 331 GAEEKSIPTLISRLPV---VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWS 387
Query: 375 P 375
P
Sbjct: 388 P 388
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 24/243 (9%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGH----------GDAEDRLSPTQLSALD 69
PV+ +++G H V L + + + G GE GQLG +RL + L
Sbjct: 173 PVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLK 232
Query: 70 GH------EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS 123
CGA T A S VY +G ++ +LG ++ F P + + +
Sbjct: 233 SRGSRGRVRFQDAFCGAYLTFAISREG-HVYGFGLSNYHQLGTPGTASCFIPQNLTSFKN 291
Query: 124 LRVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKM 180
+ G H + + EG+ S GR + G+LGLG E+ +P + VS
Sbjct: 292 STKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVS--S 349
Query: 181 VAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVM--VACGWR 238
VA GA AV++DG ++ WG G LG G D P ++ E V+ V+ G +
Sbjct: 350 VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQ 409
Query: 239 HTI 241
HT+
Sbjct: 410 HTV 412
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 225 VDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGD-FKDHLVPCQLEALRESFIS 283
+ + K V V+ H + G + + G GQLG G+ + P + L++ +
Sbjct: 17 IPKSKKVKVS----HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VV 70
Query: 284 QISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRH 343
Q G HT+ + G++Y +G N G +G +V+ V K L +KVVQ+S G H
Sbjct: 71 QAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 344 TLAVTERQNVFSWG--RGTNGQLG 365
T A+TE VF WG R NG +G
Sbjct: 131 TAALTEDGRVFLWGSFRDNNGVIG 154
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSD------LFTPLPIKALHSLRVKQIACG 132
G H T +S + YS G ++GRLG G ++ L + LP+ V +ACG
Sbjct: 301 GGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV-------VSSVACG 353
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL--QAFEGVSIKMVAAGAEHSVA 190
S AV+ +G V +WG N QLG G ED+ P ++ + E + V++G +H+V
Sbjct: 354 ASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVL 413
Query: 191 VAEDGE 196
+ +D E
Sbjct: 414 LVKDKE 419
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 7 ASEAASTTAAPFRPVLL-ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQL 65
A E + T PV+ ++ GAS A+ V +WG G + QLG G ED SP ++
Sbjct: 332 AEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Query: 66 SA--LDGHEIVSVTCGADHTT 84
+ L+ +++V+ G HT
Sbjct: 392 TGKQLENRVVLTVSSGGQHTV 412
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 172/342 (50%), Gaps = 14/342 (4%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
+L ++G HS+ L S + V S G GQLG + P + AL+ + V+CG
Sbjct: 24 LLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGK 83
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDL-FTPLPIKALHSLRVKQIACGDSHCLAV 139
+H+ A +V++WG G G+LG G ++ F P IKAL +++ Q++CG H LA+
Sbjct: 84 EHSVAVCHKG-KVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLAL 142
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDS-LVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+ +G V SWGRN GQLGLG S +PQK+++ EG+ + VAAG HS A++ G +
Sbjct: 143 SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSF 202
Query: 199 GWGWGRYGNLGL-GDRNDRLI--PEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWS 255
GWG R G L L G++ I P + + ++ ++CG+ HT ++ G+++++G +
Sbjct: 203 GWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGN 262
Query: 256 KYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA-VTSDGKLYGWGW------NK 308
GQL P +E + +SQI HT+A V + G++ G N
Sbjct: 263 SSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAYVYTTGQVVSLGRGPSHTSNP 321
Query: 309 FGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTER 350
Q +N D + + +D +V I G T R
Sbjct: 322 THQEAPAENSDITCLLAAEDLVDIEVKDIFAGAHANFVTTRR 363
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 146/261 (55%), Gaps = 5/261 (1%)
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAA 183
+ + Q A G+ H L + V S G N GQLG + + P+ +QA + + +V+
Sbjct: 22 IELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSC 81
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRND-RLIPEKVATVDREKMVMVACGWRHTIS 242
G EHSVAV G+++ WG G G LG+G+ + +P K+ + K++ V+CG H+++
Sbjct: 82 GKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLA 141
Query: 243 VSSSGRLYSYGWSKYGQLGHG-DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKL 301
+S G ++S+G + GQLG G + + +P ++++L ++Q++ G H+ A++ G
Sbjct: 142 LSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTS 201
Query: 302 YGWGWNKFGQVGV-GDNVDH--CSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGR 358
+GWG N+ GQ+ + G+ V P + + V+ ISCG+ HT +TE VF++G
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261
Query: 359 GTNGQLGHGESSDRNSPKIIE 379
++GQL S + P++IE
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIE 282
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 167/323 (51%), Gaps = 13/323 (4%)
Query: 62 PTQLSA-LDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKA 120
P +L A G E++ G H+ S +VYS G +G+LG P PI+A
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLF-SNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70
Query: 121 LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIK 179
L+ L V ++CG H +AV +G+V +WG GQLG+G E S +P K++A G+ I
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130
Query: 180 MVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDR--LIPEKVATVDREKMVMVACGW 237
V+ G HS+A++EDG ++ WG G LGLG +N R IP+KV +++ + VA G
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG-KNSRSQAIPQKVKSLEGIPLAQVAAGG 189
Query: 238 RHTISVSSSGRLYSYGWSKYGQLGH--GDFKDHLV-PCQLEALRESFISQISGGWRHTMA 294
H+ ++S +G + +G ++ GQL K+ + P + AL+ + IS G+ HT
Sbjct: 190 THSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAV 249
Query: 295 VTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLA-VTERQNV 353
+T +G+++ +G N GQ+ P Q+ + +V QI C HT+A V V
Sbjct: 250 LTEEGQVFTFGGNSSGQLQPSPRSGQRGP-QLIEGIGGRVSQIECASYHTIAYVYTTGQV 308
Query: 354 FSWGRGTN--GQLGHGESSDRNS 374
S GRG + H E+ NS
Sbjct: 309 VSLGRGPSHTSNPTHQEAPAENS 331
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQL---GHGDAEDRLSPTQLSALDGHEIVSV 76
P+ ++AG +HS AL WG GQL G+ E P + AL ++ +
Sbjct: 181 PLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYI 240
Query: 77 TCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHC 136
+CG +HT +E QV+++G G+L S P I+ + RV QI C H
Sbjct: 241 SCGYEHTAVLTEEG-QVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHT 298
Query: 137 LA-VTVEGEVQSWGR 150
+A V G+V S GR
Sbjct: 299 IAYVYTTGQVVSLGR 313
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 167/298 (56%), Gaps = 9/298 (3%)
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD 133
V ++CG +H+ + ++Y +G ++G+LG G+ S + P +KAL +VK ACG
Sbjct: 38 VHLSCGDEHSAVVT-GNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGR 96
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGV-SIKMVAAGAEHSVAVA 192
+H L T G V + G N GQLGLG TE+ + F IK ++AG+ S A+
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 193 EDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSY 252
EDG L+ WG G +GL + ++ +P++V T+ + + ++CG+ H+ V++ G LY +
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGK-PVSWISCGYYHSAFVTTDGELYVF 214
Query: 253 GWSKYGQLGHGD--FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFG 310
G + G+LG + +H P + + E I Q++ G HT+ +T + +Y +G +FG
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQFG 272
Query: 311 QVGVGDNVDHCS-PVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 367
Q+G+G + S P ++ DQ + ISCG HT +T+ ++++G G +G+LG G
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 170/333 (51%), Gaps = 14/333 (4%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
PV L S G HS + N + +G GQLG G PT + AL ++ CG
Sbjct: 37 PVHL-SCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACG 95
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL-RVKQIACGDSHCLA 138
+HT +E VY+ G + G+LG G++ + T I S ++KQ++ G + A
Sbjct: 96 RNHTLVSTEGG-NVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 139 VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELY 198
+T +G + WG N GQ+GL + VPQ++ G + ++ G HS V DGELY
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELY 212
Query: 199 GWGWGRYGNLGLGDR---NDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWS 255
+G G LGL ++ N R P+ V+ + EK++ VACG HT+ ++ + +Y++G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHR-TPQLVSEI-PEKVIQVACGGEHTVVLTENA-VYTFGLG 269
Query: 256 KYGQLGHGDFK-DHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV 314
++GQLG G F + P +E +R+ IS IS G HT +T G +Y +G + G++G+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Query: 315 G--DNVDHCSPVQVKFPLDQKVVQISCGWRHTL 345
G + +H P L V ++CG H +
Sbjct: 330 GLENFTNHFIPTLCSNFLRFIVKLVACGGCHMV 362
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 145/260 (55%), Gaps = 14/260 (5%)
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHS 188
++CGD H VT ++ +G N GQLGLG+ P ++A + +K+ A G H+
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDRE-KMVMVACGWRHTISVSSSG 247
+ E G +Y G G LGLGD +R ++ E K+ ++ G + +++ G
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDG 159
Query: 248 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWN 307
RL+ +G + GQ+G + + VP Q+ + +S IS G+ H+ VT+DG+LY +G
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP--VSWISCGYYHSAFVTTDGELYVFGEP 217
Query: 308 KFGQVGVGDNV--DHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLG 365
+ G++G+ + + +H +P Q+ + +KV+Q++CG HT+ +TE V+++G G GQLG
Sbjct: 218 ENGKLGLPNQLLGNHRTP-QLVSEIPEKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLG 275
Query: 366 HG----ESSDRNSPKIIEPL 381
G E+S+ PK+IE +
Sbjct: 276 LGTFLFETSE---PKVIENI 292
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 140/273 (51%), Gaps = 11/273 (4%)
Query: 5 SAASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQ 64
SA S+ A V L + G +H++ G V + G +GQLG GD E+R +
Sbjct: 73 SAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHV 132
Query: 65 LSALDG-HEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS 123
+S H+I ++ G++ + A +E +++ WG G++G N S++ P +
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDG-RLFMWGDNSEGQIGLKNVSNVCVPQQVTI--G 189
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTE--DSLVPQKLQAFEGVSIKMV 181
V I+CG H VT +GE+ +G +NG+LGL + PQ + I+ V
Sbjct: 190 KPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-V 248
Query: 182 AAGAEHSVAVAEDGELYGWGWGRYGNLGLGD-RNDRLIPEKVATVDREKMVMVACGWRHT 240
A G EH+V + E+ +Y +G G++G LGLG + P+ + + + + ++CG HT
Sbjct: 249 ACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHT 307
Query: 241 ISVSSSGRLYSYGWSKYGQLGHG--DFKDHLVP 271
++ G +Y++G ++G+LG G +F +H +P
Sbjct: 308 ALITDIGLMYTFGDGRHGKLGLGLENFTNHFIP 340
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 20/235 (8%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
+SAG++ S AL + WG +GQ+G + + P Q++ G + ++CG H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGN-------SSDLFTPLPIKALHSLRVKQIACGDSHC 136
A+ + ++Y +G + G+LG N + L + +P K + Q+ACG H
Sbjct: 203 -AFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI------QVACGGEHT 255
Query: 137 LAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDG 195
+ +T E V ++G Q GQLGLGT ++ P+ ++ +I ++ G H+ + + G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIG 314
Query: 196 ELYGWGWGRYGNLGLGDRN--DRLIPEKVATVDREKMVMVACGWRHTISVSSSGR 248
+Y +G GR+G LGLG N + IP + R + +VACG H + ++ R
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHR 369
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAE--DRLSPTQLSALDGHEIVSV 76
+PV IS G HS + + + +G E+G+LG + + +P +S + +++ V
Sbjct: 190 KPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEI-PEKVIQV 248
Query: 77 TCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR---VKQIACGD 133
CG +HT +E+ VY++G G FG+LG G + LF K + ++R + I+CG+
Sbjct: 249 ACGGEHTVVLTENA--VYTFGLGQFGQLGLG--TFLFETSEPKVIENIRDQTISYISCGE 304
Query: 134 SHCLAVTVEGEVQSWGRNQNGQLGLGTTE--DSLVPQKLQAFEGVSIKMVAAGAEHSVAV 191
+H +T G + ++G ++G+LGLG + +P F +K+VA G H V
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Query: 192 A 192
A
Sbjct: 365 A 365
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 246 SGRLYSYGWSKYGQLGHGDF-KDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGW 304
SG ++++G SK+ + G F + VP L S G H+ VT + KLY +
Sbjct: 11 SGAVFTFGKSKFAENNPGKFWFKNDVPVHL-----------SCGDEHSAVVTGNNKLYMF 59
Query: 305 GWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQL 364
G N +GQ+G+G P VK +KV +CG HTL TE NV++ G GQL
Sbjct: 60 GSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQL 119
Query: 365 GHGESSDRNSPKII 378
G G++ +RN+ +I
Sbjct: 120 GLGDTEERNTFHVI 133
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 299 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKV-VQISCGWRHTLAVTERQNVFSWG 357
G ++ +G +KF + G KF V V +SCG H+ VT ++ +G
Sbjct: 12 GAVFTFGKSKFAENNPG-----------KFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFG 60
Query: 358 RGTNGQLGHGESSDRNSPKIIEPL 381
GQLG G S + P ++ L
Sbjct: 61 SNNWGQLGLGSKSAISKPTCVKAL 84
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 156/297 (52%), Gaps = 11/297 (3%)
Query: 16 APFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVS 75
A R + AS ++ + + V +G LG GD + L P +L L G +I S
Sbjct: 19 ASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKS 78
Query: 76 VTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQI---ACG 132
++ G+ S VY+WG + +LG+G ++ P ++ +L +KQ+ ACG
Sbjct: 79 LSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLIKQVVEVACG 136
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMV---AAGAEHSV 189
H +A+ +GEV +WG N GQ+G G+T + P+K+ + IK V A G S+
Sbjct: 137 SHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVT--NCLHIKRVVGIACGQTSSM 194
Query: 190 AVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRL 249
AV ++GE+YGWG+ G LGLG+ ++L P +VA + + + CG+ HT++++ G L
Sbjct: 195 AVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLL 254
Query: 250 YSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV-TSDGKLYGWG 305
Y++G + YGQLG G+ + L P + +E + + HT A T G +Y WG
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 153/271 (56%), Gaps = 4/271 (1%)
Query: 112 LFTPLPIKALHSLRVKQI-ACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL 170
+FT L + + S+R + S L VT EV +G N + LG G + +LVP+KL
Sbjct: 9 IFTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL 68
Query: 171 QAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVAT-VDRE 228
+ G IK ++ G+ H + EDG +Y WG Y LG G N + P +V T + +
Sbjct: 69 EGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIK 128
Query: 229 KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQL-EALRESFISQISG 287
++V VACG H++++++ G ++++G++ GQ+G G + P ++ L + I+
Sbjct: 129 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIAC 188
Query: 288 GWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAV 347
G +MAV +G++YGWG+N GQ+G+G+N + +PV+V V QI CG+ HTLA+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
Query: 348 TERQNVFSWGRGTNGQLGHGESSDRNSPKII 378
T+ +++WG T GQLG G ++ SP I
Sbjct: 249 TDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 279
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 163/315 (51%), Gaps = 15/315 (4%)
Query: 65 LSALDGHEIVSVTCGADHTTAYSESCM-----QVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
+ L EI S+ T+ SE+ +V+ +G LG G++ P ++
Sbjct: 10 FTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLE 69
Query: 120 ALHSLRVKQIACGD-SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSI 178
L ++K ++ G H L T +G V +WG N QLG GTT + P +Q + I
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLI 127
Query: 179 KMV---AAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVM-VA 234
K V A G+ HS+A+A DGE++ WG+ G +G G ++ P KV K V+ +A
Sbjct: 128 KQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIA 187
Query: 235 CGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMA 294
CG +++V +G +Y +G++ GQLG G+ + L P ++ AL ++QI G+ HT+A
Sbjct: 188 CGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLA 247
Query: 295 VTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAV-TERQNV 353
+T +G LY WG N +GQ+G G+ + SP + ++ V +C HT A T+ +V
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHV 307
Query: 354 FSWG--RGTNGQLGH 366
+ WG RG + L H
Sbjct: 308 YMWGQCRGQSVILPH 322
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 5/185 (2%)
Query: 13 TTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHE 72
T + V+ I+ G + S+A+L V WG +GQLG G+ ++L+P +++AL
Sbjct: 175 TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC 234
Query: 73 IVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG 132
+ + CG HT A ++ + +Y+WG +G+LG GN ++L +P I V+ AC
Sbjct: 235 VNQIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACH 293
Query: 133 DSHCLAVTVE-GEVQSWGRNQNGQLGL-GTTEDSLVPQKLQAFE--GVSIKMVAAGAEHS 188
+H A + G V WG+ + + L T S F VS ++++ E
Sbjct: 294 SAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFATPAVSWRLLSVEHEDF 353
Query: 189 VAVAE 193
+ VAE
Sbjct: 354 LTVAE 358
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 188/392 (47%), Gaps = 30/392 (7%)
Query: 6 AASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQ 64
AA E+ T+ L I SH G V + G+G+ GQLG G D +R P
Sbjct: 12 AAEESNGTSDVKKTKALPIVTHPSHGTV---GGQVLTLGQGDVGQLGLGEDIMERKKPAL 68
Query: 65 LSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL 124
++ + +IV G HT S +Y++G D G LG S + P K +
Sbjct: 69 VTLTE--DIVQAAAGGMHTVCLGASG-SIYTFGCNDEGALGRDTSEEGSEMQPGKVELAE 125
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWG--RNQNGQLGL-GTTEDSLVPQKLQAFEGVSIKMV 181
+V Q++ GDSH A+T +G V +G R+ NG +GL + S+VP ++Q + +
Sbjct: 126 KVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQI--NTPVIKI 183
Query: 182 AAGAEHSVAVAEDGELYGWGWGRYGNLG-----LGDRNDR------LIPE----KVATVD 226
A+G +H V + DG+LY G G G LG +R R L+P+ K
Sbjct: 184 ASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSG 243
Query: 227 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQI- 285
R V CG T +VS G +Y +G S Y QLG + + P L + + S S I
Sbjct: 244 RVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIG 303
Query: 286 -SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHT 344
SGG HT+ V S+GK Y G ++G++G+G+N + S P K+ ++ G +
Sbjct: 304 FSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSE-PTPIPDLPKINSVASGASVS 362
Query: 345 LAVTERQNVFSWGRGTNGQLGHGESSDRNSPK 376
AV+ VF+WG GTN QLG GE D SP+
Sbjct: 363 YAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPE 394
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 108/243 (44%), Gaps = 25/243 (10%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAE----------DRLSPTQLSALD 69
PV+ I++G H V L + + G GE GQLG +RL Q L
Sbjct: 179 PVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLK 238
Query: 70 GH-----EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL 124
V CGA T A S+ VY +G ++ +LG N+ + P + + +
Sbjct: 239 AKGSGRVHFQDVFCGAYFTFAVSQEG-HVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNS 297
Query: 125 RVKQIAC--GDSHCLAVTVEGEVQSWGRNQNGQLGLG-TTEDSLVPQKLQAFEGVSIKMV 181
I G H + V EG+ S GR + G+LGLG E+ P + I V
Sbjct: 298 TKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLP--KINSV 355
Query: 182 AAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVA---TVDREKMVMVACGWR 238
A+GA S AV+ DG ++ WG G LG G+ D PE++ DRE ++ V+ G +
Sbjct: 356 ASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDRE-VLSVSSGGQ 414
Query: 239 HTI 241
HT+
Sbjct: 415 HTV 417
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 7 ASEAASTTAAPFRPVL-LISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQL 65
A E + T P P + +++GAS S A+ + V +WG G + QLG G+ ED SP Q+
Sbjct: 337 AEEQSEPTPIPDLPKINSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQM 396
Query: 66 SA--LDGHEIVSVTCGADHT 83
+ L+ E++SV+ G HT
Sbjct: 397 TGKHLEDREVLSVSSGGQHT 416
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 150/284 (52%), Gaps = 12/284 (4%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC----GDSHCLAVTVEGEVQS 147
+++ G G LG G+ P + L SL K+IAC H + T EGEV +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEP---RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 148 WGRNQNGQLGLGTTEDSLVPQKLQA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYG 206
WG N QLG GTT LVP + + VA G+ HS+ + DGE++ WG+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 207 NLGLGDRNDRLIPEKVATVDREKMVM-VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDF 265
+G G ++ IP +V + K+V+ +ACG ++V +G +Y +G++ GQLG G+
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242
Query: 266 KDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQ 325
+ PC++ AL+ + +++ G+ HT+ +T +G++Y WG N +GQ+G G+ + P
Sbjct: 243 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Query: 326 VKFPLDQKVVQISCGWRHTLAV-TERQNVFSWG--RGTNGQLGH 366
V D+ + +C HT A T+ +V+ WG RG + L H
Sbjct: 303 VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 160/287 (55%), Gaps = 13/287 (4%)
Query: 117 PIKALHS---LRVKQIAC----GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
PI +L S L++ + AC + L TV E+ G N G LGLG + ++ P++
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 91
Query: 170 LQAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVAT-VDR 227
L + G I ++ G+ H V +GE++ WG Y LG G N L+P ++T +
Sbjct: 92 LDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN 151
Query: 228 EKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLE-ALRESFISQIS 286
++++ VACG H++ ++S G ++++G++ GQ+G G + +P ++ L+ + I+
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIA 211
Query: 287 GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLA 346
G MAV G++Y WG+N GQ+G+G++ + +P +V +V +++CG+ HTL
Sbjct: 212 CGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLV 271
Query: 347 VTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 393
+T+ V++WG + GQLG G S+++ P P++++ + IA+
Sbjct: 272 LTDEGQVYAWGANSYGQLGTGNKSNQSYPT---PVTVEKDRIIEIAA 315
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 153/277 (55%), Gaps = 4/277 (1%)
Query: 49 GQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGN 108
G LG GD + + P +L +L+G +I ++ G+ + + +V++WG + +LG+G
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 135
Query: 109 SSDLFTPLPIKA-LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
++ P I L + +V ++ACG H L +T +GEV +WG N +GQ+G G+T + +P
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIP 195
Query: 168 QKLQ-AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVD 226
+++ + + +A G +AV + GE+Y WG+ G LGLG+ ++ P +VA +
Sbjct: 196 RRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQ 255
Query: 227 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQIS 286
++ VACG+ HT+ ++ G++Y++G + YGQLG G+ + P + ++ I +
Sbjct: 256 GIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Query: 287 GGWRHTMAV-TSDGKLYGWGWNKFGQVGVGDNVDHCS 322
HT A T G +Y WG + GQ + ++ H S
Sbjct: 316 CHSTHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 351
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 134/245 (54%), Gaps = 17/245 (6%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVTCGADHTTAYSESCMQVYSWGW 98
V +WG QLG+G L P +S L +++ V CG+ H+ + +V++WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD-GEVFAWGY 178
Query: 99 GDFGRLGHGNSSDLFTPLPIK---ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQ 155
+ G++G G++ + P+P + L + V IACG C+AV GEV WG N NGQ
Sbjct: 179 NNSGQVGSGSTVN--QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 156 LGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRND 215
LGLG + + P ++ A +G+ ++ VA G H++ + ++G++Y WG YG LG G++++
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 216 RLIPEKVATVDREKMV-MVACGWRHTISVSSS-GRLYSYGWSKYGQ------LGHGDFKD 267
+ P V TV++++++ + AC HT + + G +Y +G + GQ L H D
Sbjct: 297 QSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFSCTD 354
Query: 268 HLVPC 272
+ C
Sbjct: 355 DVFAC 359
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 150/284 (52%), Gaps = 12/284 (4%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC----GDSHCLAVTVEGEVQS 147
+++ G G LG G+ P + L SL K+IAC H + T EGEV +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEP---RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 148 WGRNQNGQLGLGTTEDSLVPQKLQA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYG 206
WG N QLG GTT LVP + + VA G+ HS+ + DGE++ WG+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 207 NLGLGDRNDRLIPEKVATVDREKMVM-VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDF 265
+G G ++ IP +V + K+V+ +ACG ++V +G +Y +G++ GQLG G+
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242
Query: 266 KDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQ 325
+ PC++ AL+ + +++ G+ HT+ +T +G++Y WG N +GQ+G G+ + P
Sbjct: 243 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Query: 326 VKFPLDQKVVQISCGWRHTLAV-TERQNVFSWG--RGTNGQLGH 366
V D+ + +C HT A T+ +V+ WG RG + L H
Sbjct: 303 VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 160/287 (55%), Gaps = 13/287 (4%)
Query: 117 PIKALHS---LRVKQIAC----GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
PI +L S L++ + AC + L TV E+ G N G LGLG + ++ P++
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 91
Query: 170 LQAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVAT-VDR 227
L + G I ++ G+ H V +GE++ WG Y LG G N L+P ++T +
Sbjct: 92 LDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN 151
Query: 228 EKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLE-ALRESFISQIS 286
++++ VACG H++ ++S G ++++G++ GQ+G G + +P ++ L+ + I+
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIA 211
Query: 287 GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLA 346
G MAV G++Y WG+N GQ+G+G++ + +P +V +V +++CG+ HTL
Sbjct: 212 CGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLV 271
Query: 347 VTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 393
+T+ V++WG + GQLG G S+++ P P++++ + IA+
Sbjct: 272 LTDEGQVYAWGANSYGQLGTGNKSNQSYPT---PVTVEKDRIIEIAA 315
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 153/277 (55%), Gaps = 4/277 (1%)
Query: 49 GQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGN 108
G LG GD + + P +L +L+G +I ++ G+ + + +V++WG + +LG+G
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 135
Query: 109 SSDLFTPLPIKA-LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
++ P I L + +V ++ACG H L +T +GEV +WG N +GQ+G G+T + +P
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIP 195
Query: 168 QKLQ-AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVD 226
+++ + + +A G +AV + GE+Y WG+ G LGLG+ ++ P +VA +
Sbjct: 196 RRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQ 255
Query: 227 REKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQIS 286
++ VACG+ HT+ ++ G++Y++G + YGQLG G+ + P + ++ I +
Sbjct: 256 GIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Query: 287 GGWRHTMAV-TSDGKLYGWGWNKFGQVGVGDNVDHCS 322
HT A T G +Y WG + GQ + ++ H S
Sbjct: 316 CHSTHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 351
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 134/245 (54%), Gaps = 17/245 (6%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVTCGADHTTAYSESCMQVYSWGW 98
V +WG QLG+G L P +S L +++ V CG+ H+ + +V++WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD-GEVFAWGY 178
Query: 99 GDFGRLGHGNSSDLFTPLPIK---ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQ 155
+ G++G G++ + P+P + L + V IACG C+AV GEV WG N NGQ
Sbjct: 179 NNSGQVGSGSTVN--QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 156 LGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRND 215
LGLG + + P ++ A +G+ ++ VA G H++ + ++G++Y WG YG LG G++++
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 216 RLIPEKVATVDREKMV-MVACGWRHTISVSSS-GRLYSYGWSKYGQ------LGHGDFKD 267
+ P V TV++++++ + AC HT + + G +Y +G + GQ L H D
Sbjct: 297 QSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFSCTD 354
Query: 268 HLVPC 272
+ C
Sbjct: 355 DVFAC 359
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 149/281 (53%), Gaps = 6/281 (2%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD-SHCLAVTVEGEVQSWGR 150
+++ G G LG G+ P + +L ++ ++ G H + T +GEV +WG
Sbjct: 66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGH 125
Query: 151 NQNGQLGLGTTEDSLVPQKLQA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG 209
N QLG GTT LVP + + VA G+ HS+ + DGE++ WG+ G +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 210 LGDRNDRLIPEKVATVDREKMVM-VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDH 268
G ++ IP +V + K+VM +ACG +++V +G +Y +G++ GQLG G +
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ 245
Query: 269 LVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF 328
PC++ AL+ + +++ G+ HT+ +T +G++Y WG N +GQ+G G+ + P V
Sbjct: 246 PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Query: 329 PLDQKVVQISCGWRHTLAV-TERQNVFSWG--RGTNGQLGH 366
D+ + +C HT A T+ +V+ WG RG + L H
Sbjct: 306 EKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 146/265 (55%), Gaps = 3/265 (1%)
Query: 44 GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGR 103
G G LG GD + + P +L +L G +I S++ G+ + + +V++WG + +
Sbjct: 71 GTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQ 130
Query: 104 LGHGNSSDLFTPLPIKA-LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTE 162
LG+G ++ P I L + +V ++ACG H L +T +GEV +WG N +GQ+G G+T
Sbjct: 131 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190
Query: 163 DSLVPQKLQ-AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEK 221
+ +P+++ + + +A G S+AV + GE+Y WG+ G LGLG ++ P +
Sbjct: 191 NQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250
Query: 222 VATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESF 281
VA + ++ VACG+ HT+ ++ G++Y++G + YGQLG G+ + P + ++
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRI 310
Query: 282 ISQISGGWRHTMAV-TSDGKLYGWG 305
I + HT A T G +Y WG
Sbjct: 311 IEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 160/287 (55%), Gaps = 13/287 (4%)
Query: 117 PIKALHS---LRVKQIAC----GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
PI +L S L++ + AC + L TV E+ G N +G LG+G + ++ P++
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRR 91
Query: 170 LQAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVAT-VDR 227
L + G I ++ G+ H V DGE++ WG Y LG G N L+P ++T +
Sbjct: 92 LDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN 151
Query: 228 EKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLE-ALRESFISQIS 286
++++ VACG H++ ++S G ++++G++ GQ+G G + +P ++ L+ + I+
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIA 211
Query: 287 GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLA 346
G +MAV G++Y WG+N GQ+G+G + + +P +V +V +++CG+ HTL
Sbjct: 212 CGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLV 271
Query: 347 VTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 393
+T+ +++WG + GQLG G S+++ P P+ ++ + IA+
Sbjct: 272 LTDEGQIYAWGANSYGQLGTGNKSNQSYPT---PVVVEKDRIIEIAA 315
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 130/233 (55%), Gaps = 10/233 (4%)
Query: 30 HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVTCGADHTTAYSE 88
H V + V +WG QLG+G L P +S L +++ V CG+ H+ +
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 89 SCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK---ALHSLRVKQIACGDSHCLAVTVEGEV 145
+V++WG+ + G++G G++++ P+P + L + V IACG +AV GEV
Sbjct: 170 D-GEVFAWGYNNSGQVGSGSTAN--QPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEV 226
Query: 146 QSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRY 205
WG N NGQLGLG++ + P ++ A +G+ ++ VA G H++ + ++G++Y WG Y
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286
Query: 206 GNLGLGDRNDRLIPEKVATVDREKMV-MVACGWRHTISVSSS-GRLYSYGWSK 256
G LG G+++++ P V V++++++ + AC HT + + G +Y +G +
Sbjct: 287 GQLGTGNKSNQSYPTPVV-VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCR 338
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 103/188 (54%), Gaps = 3/188 (1%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS-ALDGHEIVSVT 77
+ V+ ++ G+ HS+ L S V +WG GQ+G G ++ P +++ L ++++
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIA 211
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCL 137
CG + A ++ +VY WG+ G+LG G+S + TP + AL +RV+++ACG +H L
Sbjct: 212 CGQMCSMAVVDT-GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEH-SVAVAEDGE 196
+T EG++ +WG N GQLG G + P + + I++ A + H S A + G
Sbjct: 271 VLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGH 330
Query: 197 LYGWGWGR 204
+Y WG R
Sbjct: 331 VYMWGQCR 338
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 148/281 (52%), Gaps = 6/281 (2%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD-SHCLAVTVEGEVQSWGR 150
+++ G G LG G+ P + +L ++ ++ G H + T +GEV +WG
Sbjct: 66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGH 125
Query: 151 NQNGQLGLGTTEDSLVPQKLQA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG 209
N QLG GTT LVP + + VA G+ HS+ + DGE++ WG+ G +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 210 LGDRNDRLIPEKVATVDREKMVM-VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDH 268
G ++ IP +V + K+VM +ACG +++V +G +Y +G++ GQLG G +
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ 245
Query: 269 LVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF 328
PC++ AL+ + +++ G+ HT+ +T +G++Y WG N +GQ+G G+ + P V
Sbjct: 246 PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Query: 329 PLDQKVVQISCGWRHTLAVTER-QNVFSWG--RGTNGQLGH 366
D+ + +C HT A + +V+ WG RG + L H
Sbjct: 306 EKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCRGQSVILPH 346
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 146/265 (55%), Gaps = 3/265 (1%)
Query: 44 GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGR 103
G G LG GD + + P +L +L G +I S++ G+ + + +V++WG + +
Sbjct: 71 GTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQ 130
Query: 104 LGHGNSSDLFTPLPIKA-LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTE 162
LG+G ++ P I L + +V ++ACG H L +T +GEV +WG N +GQ+G G+T
Sbjct: 131 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190
Query: 163 DSLVPQKLQ-AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEK 221
+ +P+++ + + +A G S+AV + GE+Y WG+ G LGLG ++ P +
Sbjct: 191 NQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250
Query: 222 VATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESF 281
VA + ++ VACG+ HT+ ++ G++Y++G + YGQLG G+ + P + ++
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRI 310
Query: 282 ISQISGGWRHTMAVTSD-GKLYGWG 305
I + HT A S G +Y WG
Sbjct: 311 IEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 160/287 (55%), Gaps = 13/287 (4%)
Query: 117 PIKALHS---LRVKQIAC----GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
PI +L S L++ + AC + L TV E+ G N +G LG+G + ++ P++
Sbjct: 32 PIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRR 91
Query: 170 LQAFEGVSIKMVAAGA-EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVAT-VDR 227
L + G I ++ G+ H V DGE++ WG Y LG G N L+P ++T +
Sbjct: 92 LDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN 151
Query: 228 EKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLE-ALRESFISQIS 286
++++ VACG H++ ++S G ++++G++ GQ+G G + +P ++ L+ + I+
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIA 211
Query: 287 GGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLA 346
G +MAV G++Y WG+N GQ+G+G + + +P +V +V +++CG+ HTL
Sbjct: 212 CGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLV 271
Query: 347 VTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 393
+T+ +++WG + GQLG G S+++ P P+ ++ + IA+
Sbjct: 272 LTDEGQIYAWGANSYGQLGTGNKSNQSYPT---PVVVEKDRIIEIAA 315
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 130/233 (55%), Gaps = 10/233 (4%)
Query: 30 HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVTCGADHTTAYSE 88
H V + V +WG QLG+G L P +S L +++ V CG+ H+ +
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 89 SCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK---ALHSLRVKQIACGDSHCLAVTVEGEV 145
+V++WG+ + G++G G++++ P+P + L + V IACG +AV GEV
Sbjct: 170 D-GEVFAWGYNNSGQVGSGSTAN--QPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEV 226
Query: 146 QSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRY 205
WG N NGQLGLG++ + P ++ A +G+ ++ VA G H++ + ++G++Y WG Y
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286
Query: 206 GNLGLGDRNDRLIPEKVATVDREKMV-MVACGWRHTISVSSS-GRLYSYGWSK 256
G LG G+++++ P V V++++++ + AC HT + S G +Y +G +
Sbjct: 287 GQLGTGNKSNQSYPTPVV-VEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCR 338
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS-ALDGHEIVSVT 77
+ V+ ++ G+ HS+ L S V +WG GQ+G G ++ P +++ L ++S+
Sbjct: 152 KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIA 211
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCL 137
CG + A ++ +VY WG+ G+LG G+S + TP + AL +RV+++ACG +H L
Sbjct: 212 CGQMCSMAVVDT-GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEH-SVAVAEDGE 196
+T EG++ +WG N GQLG G + P + + I++ A + H S A ++ G
Sbjct: 271 VLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGH 330
Query: 197 LYGWGWGR 204
+Y WG R
Sbjct: 331 VYMWGQCR 338
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 121/209 (57%), Gaps = 2/209 (0%)
Query: 121 LHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV-PQKLQAFEGVSIK 179
L ++ QI CGD H LA++ GE+ +WG+N +GQLG+G S PQ ++ GV +
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLA 194
Query: 180 MVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRH 239
++AG HS+A++ G +Y WG G LGLG + P + +D +K+ VACG H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 240 TISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSD- 298
+ ++ G L+++G K+GQLGH ++ L PC + L ++QI+ G HT+A SD
Sbjct: 255 SALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL 314
Query: 299 GKLYGWGWNKFGQVGVGDNVDHCSPVQVK 327
GK++ +G K GQ+G G D P+ VK
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 122/208 (58%), Gaps = 3/208 (1%)
Query: 66 SALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNS-SDLFTPLPIKALHSL 124
S L +I+ +TCG H+ A S+ ++++WG G+LG G TP ++ L +
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGG-ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAG 184
+ QI+ G++H +A+++ G + SWG+N+ GQLGLG TE P ++ + ++ VA G
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG 251
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTIS-V 243
HS + +DG L+ +G G++G LG + L P VA + ++ +ACG HT++ V
Sbjct: 252 GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYV 311
Query: 244 SSSGRLYSYGWSKYGQLGHGDFKDHLVP 271
S G+++S+G K GQLG+G +D L+P
Sbjct: 312 SDLGKVFSFGSGKDGQLGNGGTRDQLMP 339
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 135/264 (51%), Gaps = 13/264 (4%)
Query: 114 TPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAF 173
TP IK ++++ + G H L ++ +G+ + L +S++ +K
Sbjct: 87 TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRF----ESILQEK---- 138
Query: 174 EGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDR-NDRLIPEKVATVDREKMVM 232
I + G HS+A+++ GEL+ WG +G LG+G + P+ V + +
Sbjct: 139 ---KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195
Query: 233 VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHT 292
++ G H++++S SG +YS+G ++ GQLG G + P +E L + ++ G H+
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHS 255
Query: 293 MAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLA-VTERQ 351
+T DG L+ +G K GQ+G + P V + +V QI+CG HTLA V++
Sbjct: 256 ALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLG 315
Query: 352 NVFSWGRGTNGQLGHGESSDRNSP 375
VFS+G G +GQLG+G + D+ P
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMP 339
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 4/190 (2%)
Query: 20 PVLLISAGASHSVAL-LSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
P+ ISAG +HS+AL +SGNI SWG+ E GQLG G E + P+ + LD ++ V C
Sbjct: 192 PLAQISAGEAHSMALSMSGNIY-SWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVAC 250
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLA 138
G H+ ++ + ++++G G G+LGH ++ + P + L RV QIACG H LA
Sbjct: 251 GGSHSALLTQDGL-LFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309
Query: 139 -VTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGEL 197
V+ G+V S+G ++GQLG G T D L+P ++ +K+ + +E + + G
Sbjct: 310 YVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQ 369
Query: 198 YGWGWGRYGN 207
W + N
Sbjct: 370 SILLWIKKEN 379
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 117/217 (53%), Gaps = 14/217 (6%)
Query: 167 PQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGD-RNDRLIPEKVATV 225
P+ ++ + + I V GAEH + ++ DG+ + Y N + R + ++ EK
Sbjct: 88 PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF-----EYDNYSMKHLRFESILQEK---- 138
Query: 226 DREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG-DFKDHLVPCQLEALRESFISQ 284
K++ + CG H++++S G L+++G + +GQLG G F P +E L ++Q
Sbjct: 139 ---KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195
Query: 285 ISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHT 344
IS G H+MA++ G +Y WG N+ GQ+G+G P ++ +QKV ++CG H+
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHS 255
Query: 345 LAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 381
+T+ +F++G G +GQLGH + + P ++ L
Sbjct: 256 ALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL 292
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 3/216 (1%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDGHEIVSVT 77
+ ++ I+ G HS+AL G + +WG+ GQLG G +P + L G + ++
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCL 137
G H+ A S S +YSWG + G+LG G++ P I+ L + +V+ +ACG SH
Sbjct: 198 AGEAHSMALSMSG-NIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSA 256
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAED-GE 196
+T +G + ++G ++GQLG +T++ L P + G + +A G H++A D G+
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGK 316
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVM 232
++ +G G+ G LG G D+L+P V E++ +
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKL 352
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 80
V ++ G SHS L ++ ++G G+ GQLGH ++ L P ++ L G+ + + CG
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGR 304
Query: 81 DHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVT 140
HT AY +V+S+G G G+LG+G + D PLP+K S +K + S +
Sbjct: 305 WHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK-LESHTSEKELIM 363
Query: 141 VEGEVQS---WGRNQNGQLGLGTTEDSL 165
+ G QS W + +N + L T +L
Sbjct: 364 IAGGNQSILLWIKKENSYVNLKRTIPTL 391
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 173/363 (47%), Gaps = 52/363 (14%)
Query: 65 LSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL 124
LS + +VS +C A +E +++SWG + G+LGHG++ + P I+AL
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEG--KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE 200
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAG 184
+ ACG +H LA+T G V ++G N+ GQLGLG D++ + G I +A G
Sbjct: 201 AIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACG 260
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLGD------RNDR------LIPEKVA-----TVDR 227
AE S+ + G LY +G YG LG R R L+P +VA T D
Sbjct: 261 AEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 320
Query: 228 EKMVM-------VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVP--CQLEALR 278
+ + + VACG HT+ + S R++S+G+ YG+LGH + KD +VP +L
Sbjct: 321 QILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFP 380
Query: 279 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQIS 338
+QI G+ + AV+ G L+ WG + S +P K VQ
Sbjct: 381 GRGATQIYAGYTCSFAVSEVGGLFFWG------------ATNTSRESTMYP---KAVQDL 425
Query: 339 CGWR--------HTLAVTERQNVFSWGRG-TNGQLGHGESSDRNSPKIIEPLSLDGSKGQ 389
CGWR ++ V ++ SWG T G+LG+G+ ++S E +LDG +
Sbjct: 426 CGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSE 485
Query: 390 NIA 392
+A
Sbjct: 486 QVA 488
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 30/276 (10%)
Query: 111 DLFTPLPIKALHSLRVKQIACGD--SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ 168
+L+ P L +RV+ + G +H L +T EG++ SWGRN+ GQLG G T+ P+
Sbjct: 133 NLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPR 192
Query: 169 KLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDRE 228
++A +I + A G H++A+ + G ++ +G + G LGLG++ D + + +
Sbjct: 193 LIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 252
Query: 229 KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG------------DFKDHLVPCQLEA 276
+ +ACG ++ + G LYS+G +YGQLGH ++ LVP ++
Sbjct: 253 PITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAI 312
Query: 277 LRES------------FISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPV 324
E + ++ G HT+ + S +++ WG+ +G++G + D P
Sbjct: 313 FIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR 372
Query: 325 QVK---FPLDQKVVQISCGWRHTLAVTERQNVFSWG 357
VK FP + QI G+ + AV+E +F WG
Sbjct: 373 LVKLFDFP-GRGATQIYAGYTCSFAVSEVGGLFFWG 407
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 167/350 (47%), Gaps = 39/350 (11%)
Query: 28 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYS 87
A+HS+ + + + SWGR E GQLGHGD + +P + AL IV CG +HT A +
Sbjct: 157 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 216
Query: 88 ESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTVEGEVQ 146
++ V+++G G+LG GN +D P P + +++ + + ++ACG + + +G +
Sbjct: 217 DT-GSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 147 SWGRNQNGQLGLGTT------------EDSLVPQKLQAF------------EGVSIKMVA 182
S+G + GQLG + + LVP+++ F V ++ VA
Sbjct: 275 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 334
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDR--EKMVMVACGWRHT 240
GA H++ + ++ WG+G YG LG ++ D ++P V D + G+ +
Sbjct: 335 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCS 394
Query: 241 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 300
+VS G L+ +G + + + + P ++ L I ++ G + ++ V +D
Sbjct: 395 FAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLACG-KSSIIVAADES 447
Query: 301 LYGWGWNK-FGQVGVGDNVDHCSPVQVKFPLDQKVV--QISCGWRHTLAV 347
WG + FG++G GD+ S + + Q++ G+ H+L +
Sbjct: 448 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 497
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 147/310 (47%), Gaps = 43/310 (13%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCG 79
++L + G +H++AL V ++G + GQLG G+ D + SP Q+ +G I + CG
Sbjct: 202 IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACG 260
Query: 80 ADHTTAYSESCM-QVYSWGWGDFGRLGHGNSSDLFTP-----------LP---------- 117
A+ + C +YS+G ++G+LGH NS F +P
Sbjct: 261 AEFSMLM--DCKGNLYSFGCPEYGQLGH-NSDGKFIARAQRIEYDCELVPRRVAIFIEKT 317
Query: 118 ----IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ--KLQ 171
I + ++ V+ +ACG +H L + + V SWG G+LG +D +VP+ KL
Sbjct: 318 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMV 231
F G + AG S AV+E G L+ WG R + P+ V + ++
Sbjct: 378 DFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIR 431
Query: 232 MVACGWRHTISVSSSGRLYSYGWSK-YGQLGHGDFKDH--LVPCQLEALRESFISQISGG 288
+ACG + +I V++ S+G S +G+LG+GD K +++ L F Q++ G
Sbjct: 432 SLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMG 490
Query: 289 WRHTMAVTSD 298
+ H++ + D
Sbjct: 491 YSHSLVIARD 500
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 174/367 (47%), Gaps = 57/367 (15%)
Query: 60 LSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
LS Q+S +VS C A +E +++SWG D G+LGHG++ L P I+
Sbjct: 118 LSDVQVSC-----VVSGPCAAHSLIITTEG--KLWSWGRNDKGQLGHGDTKRLEAPKLIE 170
Query: 120 ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIK 179
L + ACG +H LA+T G V ++G N+ GQLG G D+++ + G I
Sbjct: 171 GLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIV 230
Query: 180 MVAAGAEHSVAVAEDGELYGWGWGRYGNLG------LGDRNDR------LIPEKVA---- 223
VA GAE S+ V G LY +G YG LG R R LIP +VA
Sbjct: 231 KVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIE 290
Query: 224 -TVDREKMVM-------VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVP--CQ 273
T D + + + VACG HT+ + S R++S+G+ YG+LGH + KD +VP +
Sbjct: 291 KTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK 350
Query: 274 LEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQK 333
L +QI G++ + A++ G L+ WG V + S +P K
Sbjct: 351 LFDFPGRGATQIYCGYQCSFALSEMGGLFFWG------------VTNTSRESTMYP---K 395
Query: 334 VVQISCGW--------RHTLAVTERQNVFSWGRG-TNGQLGHGESSDRNSPKIIEPLSLD 384
VQ CGW + ++ V + SWG T G+LG+G++ ++S E +LD
Sbjct: 396 AVQDLCGWKIRSLACGKSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLD 455
Query: 385 GSKGQNI 391
G + +
Sbjct: 456 GVYSEQV 462
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 137/286 (47%), Gaps = 34/286 (11%)
Query: 101 FGRLGHGNSSDLFTPLPIKALHSLRVKQIACGD--SHCLAVTVEGEVQSWGRNQNGQLGL 158
F LG +L+ P L ++V + G +H L +T EG++ SWGRN GQLG
Sbjct: 102 FRNLGQ----NLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGH 157
Query: 159 GTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLI 218
G T+ P+ ++ I A G H++A+ E+G +Y +G + G LG G++ D ++
Sbjct: 158 GDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVL 217
Query: 219 PEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG------------DFK 266
+ + +V VACG ++ V G LYS+G +YGQLGH +F
Sbjct: 218 SPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFD 277
Query: 267 DHLVPCQLEALRES------------FISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV 314
L+P ++ E ++ G HT+ + S +++ WG+ +G++G
Sbjct: 278 CELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGH 337
Query: 315 GDNVDHCSPVQVK---FPLDQKVVQISCGWRHTLAVTERQNVFSWG 357
+ D P VK FP + QI CG++ + A++E +F WG
Sbjct: 338 AEQKDEMVPRLVKLFDFP-GRGATQIYCGYQCSFALSEMGGLFFWG 382
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 168/353 (47%), Gaps = 39/353 (11%)
Query: 28 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYS 87
A+HS+ + + + SWGR + GQLGHGD + +P + L IV+ CG +HT A +
Sbjct: 132 AAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 88 ESCMQVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQ 146
E+ VY++G G+LG GN +D + +P I+ + + ++ACG + V +G +
Sbjct: 192 ENGT-VYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLY 249
Query: 147 SWGRNQNGQLGLGTT------------EDSLVPQKLQAF------------EGVSIKMVA 182
S+G + GQLG + + L+P+++ F V + VA
Sbjct: 250 SFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVA 309
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDR--EKMVMVACGWRHT 240
GA H++ + ++ WG+G YG LG ++ D ++P V D + CG++ +
Sbjct: 310 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCS 369
Query: 241 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 300
++S G L+ +G + + + + P ++ L I ++ G + ++ V +D
Sbjct: 370 FALSEMGGLFFWGVTNTSR------ESTMYPKAVQDLCGWKIRSLACG-KSSIIVAADDS 422
Query: 301 LYGWGWN-KFGQVGVGDNVDHCSPV--QVKFPLDQKVVQISCGWRHTLAVTER 350
WG + FG++G GDN S +VK Q+ G+ H+L + +
Sbjct: 423 TISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQ 475
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 43/307 (14%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR-LSPTQLSALDGHEIVSVTCG 79
++ + G +H++AL V ++G + GQLG G+ D LSP + +G IV V CG
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACG 235
Query: 80 ADHTTAYSESCM-QVYSWGWGDFGRLGHGNSSDLFTP-----------LP---------- 117
A+ + C +YS+G ++G+LGH NS F +P
Sbjct: 236 AEFSMIV--DCKGNLYSFGCPEYGQLGH-NSDGKFIARAQRIEFDCELIPRRVAIFIEKT 292
Query: 118 ----IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ--KLQ 171
+ + ++ + +ACG +H L + + V SWG G+LG +D +VP+ KL
Sbjct: 293 KDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 352
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMV 231
F G + G + S A++E G L+ WG + R + P+ V + K+
Sbjct: 353 DFPGRGATQIYCGYQCSFALSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIR 406
Query: 232 MVACGWRHTISVSSSGRLYSYGWS-KYGQLGHGDFKDH--LVPCQLEALRESFISQISGG 288
+ACG + +I V++ S+G S +G+LG+GD K +++ L + Q+ G
Sbjct: 407 SLACG-KSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMG 465
Query: 289 WRHTMAV 295
+ H++ +
Sbjct: 466 YSHSLVI 472
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 37/255 (14%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHG------------DAEDRLSPTQLS 66
+P++ ++ GA S+ + + S+G E GQLGH + + L P +++
Sbjct: 227 QPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVA 286
Query: 67 AL-----DGHEIV-------SVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT 114
DG + V CGA+HT +S +V+SWG+G +GRLGH D
Sbjct: 287 IFIEKTKDGQVLPVPNVVARDVACGANHTLVL-DSQKRVFSWGFGGYGRLGHAEQKDEMV 345
Query: 115 PLPIKALH--SLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQA 172
P +K QI CG A++ G + WG + E ++ P+ +Q
Sbjct: 346 PRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSR------ESTMYPKAVQD 399
Query: 173 FEGVSIKMVAAGAEHSVAVAEDGELYGWGWG-RYGNLGLGDRNDR--LIPEKVATVDREK 229
G I+ +A G + S+ VA D WG +G LG GD + ++V T+D
Sbjct: 400 LCGWKIRSLACG-KSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVY 458
Query: 230 MVMVACGWRHTISVS 244
V G+ H++ ++
Sbjct: 459 SEQVVMGYSHSLVIA 473
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 172/363 (47%), Gaps = 52/363 (14%)
Query: 65 LSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL 124
L+ + +VS +C A +E +++SWG + G+LGHG++ + P I+ L
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEG--KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHE 202
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAG 184
+ ACG +H LA+T G V ++G N+ GQLGLG D++ + G I +A G
Sbjct: 203 VIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACG 262
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLG------------DRNDRLIPEKVA-----TVDR 227
AE S+ + G LY +G YG LG + + L+P +VA T D
Sbjct: 263 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 322
Query: 228 EKMVM-------VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVP--CQLEALR 278
+ + + VACG HT+ + S R++S+G+ YG+LGH + KD +VP +L
Sbjct: 323 QILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFP 382
Query: 279 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQIS 338
SQI G+ + AV+ G L+ WG + S +P K VQ
Sbjct: 383 GRGASQIYAGYTCSFAVSEVGGLFFWG------------ATNTSRESTMYP---KAVQDL 427
Query: 339 CGWR--------HTLAVTERQNVFSWGRG-TNGQLGHGESSDRNSPKIIEPLSLDGSKGQ 389
CGWR ++ V ++ SWG T G+LG+G+ ++S E +LDG +
Sbjct: 428 CGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSE 487
Query: 390 NIA 392
+A
Sbjct: 488 QVA 490
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 30/276 (10%)
Query: 111 DLFTPLPIKALHSLRVKQIACGD--SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ 168
+L+ P L +RV+ + G +H L +T EG++ SWGRN+ GQLG G T+ P+
Sbjct: 135 NLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPR 194
Query: 169 KLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDRE 228
++ I A G H++A+ E G ++ +G + G LGLG++ D + + +
Sbjct: 195 LIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 254
Query: 229 KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG------------DFKDHLVPCQLEA 276
+ +ACG ++ + G LYS+G +YGQLGH ++ LVP ++
Sbjct: 255 PITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAI 314
Query: 277 LRES------------FISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPV 324
E + ++ G HT+ + S +++ WG+ +G++G + D P
Sbjct: 315 FIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR 374
Query: 325 QVK---FPLDQKVVQISCGWRHTLAVTERQNVFSWG 357
VK FP + QI G+ + AV+E +F WG
Sbjct: 375 LVKLFDFP-GRGASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 172/362 (47%), Gaps = 45/362 (12%)
Query: 28 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYS 87
A+HS+ + + + SWGR E GQLGHGD + +P + L IVS CG +HT A +
Sbjct: 159 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 218
Query: 88 ESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTVEGEVQ 146
E+ V+++G G+LG GN +D P P + +++ + + ++ACG + + +G +
Sbjct: 219 ET-GSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 147 SWGRNQNGQLGLGTT------------EDSLVPQKLQAF------------EGVSIKMVA 182
S+G + GQLG + + LVP+++ F V ++ VA
Sbjct: 277 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 336
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDR--EKMVMVACGWRHT 240
GA H++ + ++ WG+G YG LG ++ D ++P V D + G+ +
Sbjct: 337 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCS 396
Query: 241 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 300
+VS G L+ +G + + + + P ++ L I ++ G + ++ V +D
Sbjct: 397 FAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLACG-KSSIIVAADES 449
Query: 301 LYGWGWNK-FGQVGVGDNVDHCSPVQVKFPLDQKVV--QISCGWRHTLAV------TERQ 351
WG + FG++G GD+ S + + Q++ G+ H+L + TE++
Sbjct: 450 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKE 509
Query: 352 NV 353
+
Sbjct: 510 KI 511
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 43/310 (13%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCG 79
++ + G +H++AL V ++G + GQLG G+ D + SP Q+ +G I + CG
Sbjct: 204 IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACG 262
Query: 80 ADHTTAYSESCM-QVYSWGWGDFGRLGHGNSSDLFTP-----------LP---------- 117
A+ + C +YS+G ++G+LGH NS F +P
Sbjct: 263 AEFSMIM--DCKGNLYSFGCPEYGQLGH-NSDGKFIARAQRIEYDCELVPRRVAIFIEKT 319
Query: 118 ----IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ--KLQ 171
I + ++ V+ +ACG +H L + + V SWG G+LG +D +VP+ KL
Sbjct: 320 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMV 231
F G + AG S AV+E G L+ WG R + P+ V + ++
Sbjct: 380 DFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIR 433
Query: 232 MVACGWRHTISVSSSGRLYSYGWSK-YGQLGHGDFKDH--LVPCQLEALRESFISQISGG 288
+ACG + +I V++ S+G S +G+LG+GD K +++ L F Q++ G
Sbjct: 434 SLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMG 492
Query: 289 WRHTMAVTSD 298
+ H++ + D
Sbjct: 493 YSHSLVIARD 502
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 37/255 (14%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHG------------DAEDRLSPTQLS 66
+P+ ++ GA S+ + + S+G E GQLGH + + L P +++
Sbjct: 254 QPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVA 313
Query: 67 AL-----DGH-------EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT 114
DG + V CGA+HT +S +V+SWG+G +GRLGH D
Sbjct: 314 IFIEKTKDGQILPVPNVVVRDVACGANHTLVL-DSQKRVFSWGFGGYGRLGHAEQKDEMV 372
Query: 115 PLPIKALH--SLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQA 172
P +K QI G + AV+ G + WG + E ++ P+ +Q
Sbjct: 373 PRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQD 426
Query: 173 FEGVSIKMVAAGAEHSVAVAEDGELYGWGWG-RYGNLGLGDRNDR--LIPEKVATVDREK 229
G I+ +A G + S+ VA D WG +G LG GD + ++V T+D
Sbjct: 427 LCGWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIF 485
Query: 230 MVMVACGWRHTISVS 244
VA G+ H++ ++
Sbjct: 486 SEQVAMGYSHSLVIA 500
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 170/356 (47%), Gaps = 32/356 (8%)
Query: 24 ISAGASHSVALLSGNIVCSW-----GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ AG +H + + +W G GQLGHGD P + L G + V+C
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSC 415
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNS--SDLFTPLPIKALHSLRVKQIACGDSHC 136
G+D T ++ Q+YS+G +G LG S S++ PL + + V Q++CGDSH
Sbjct: 416 GSDFTVCITDE-GQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHI 474
Query: 137 LAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
+A+T V SWG + G+LGL + +D PQK++ G+ I V G++ S + G+
Sbjct: 475 MALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGK 534
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKV---------ATVDRE----KMVMVACGWRHTISV 243
+ G + LGL +I + T+ ++ K+ ++ G HT ++
Sbjct: 535 VLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAI 594
Query: 244 SSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTSDGKLY 302
GRL ++G +K GQLG GD++ HL + L + ++S G T A T+D ++
Sbjct: 595 DERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIF 654
Query: 303 GWGWNKFGQVGVGDN-----VDHCS--PVQVKFPLDQKVVQISC-GWRHTLAVTER 350
WG G++ + N D C+ P + F V +SC GW HT+ + E+
Sbjct: 655 AWGNGGNGRLAMTPNERPQGSDICTSWPRPI-FGSLHHVTDLSCRGW-HTILIVEK 708
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 20/264 (7%)
Query: 125 RVKQIACGDSHCLAVTVEGEVQSW-----GRNQNGQLGLGTTEDSLVPQKLQAFEGVSIK 179
R +Q+ GD+H VTVE E+ +W G +GQLG G P+ ++ +G S++
Sbjct: 352 RARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQ 411
Query: 180 MVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDR--NDRLIPEKVATVDREKMVMVACGW 237
V+ G++ +V + ++G+LY +G YG LG+ ++ L P V E + V+CG
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471
Query: 238 RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 297
H ++++ S +YS+G +YG+LG D P ++E R I + G + +T
Sbjct: 472 SHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTL 531
Query: 298 DGKLYGWGWNKFGQVGVGDN----VDHCSPVQVKFPLD---------QKVVQISCGWRHT 344
GK+ G N+ ++G+ ++H + +V + K+ IS G HT
Sbjct: 532 TGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHT 591
Query: 345 LAVTERQNVFSWGRGTNGQLGHGE 368
A+ ER + ++G GQLG G+
Sbjct: 592 AAIDERGRLLTFGSNKCGQLGVGD 615
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 5 SAASEAASTTAAPF---RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLS 61
SA SE F PV +S G SH +AL V SWG GE G+LG +D S
Sbjct: 445 SAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYS 504
Query: 62 PTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSS------DLFTP 115
P ++ G IV+V CG+D + + + +V + G + +LG + + F
Sbjct: 505 PQKVEVQRGLCIVNVCCGSDGSFLLTLT-GKVLACGLNEHNKLGLNQYTAGIINHEAFQE 563
Query: 116 LPI-------KALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ 168
+P K L +++ I+ G +H A+ G + ++G N+ GQLG+G L
Sbjct: 564 VPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGIN 623
Query: 169 KL-QAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGL 210
L G + V+ G E + A D ++ WG G G L +
Sbjct: 624 LLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAM 666
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 336 QISCGWRHTLAVTERQNVFSW-----GRGTNGQLGHGESSDRNSPKIIEPL 381
Q+ G H VT + +++W G +GQLGHG+ + PK +E L
Sbjct: 355 QVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKL 405
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 55/362 (15%)
Query: 62 PTQLSALDGHEIVSV---TCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPI 118
P + L G ++ SV +C A E +++SWG D G+LGHG+ + P I
Sbjct: 130 PHRYGCLTGVQVRSVASGSCAAHSLLITVEG--KLWSWGRNDKGQLGHGDIKRIDVPKLI 187
Query: 119 KALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSI 178
++L ACG +H LA+T G V ++G N+ GQLGLG D++ + G I
Sbjct: 188 ESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPI 247
Query: 179 KMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGD------RNDR------LIPEKVA--- 223
VA GAE S+ + G LY +G YG LG R R LI ++A
Sbjct: 248 TKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFI 307
Query: 224 --TVDREKMVM-------VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVP--C 272
T D + + + +ACG H++ + S R++S+G+ YG+LGH + +D +VP
Sbjct: 308 EKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLV 367
Query: 273 QLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQ 332
+L +QI G + AV+ G L+ WG + S +P
Sbjct: 368 KLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWG------------ATNTSRDSTMYP--- 412
Query: 333 KVVQISCGWR--------HTLAVTERQNVFSWGRG-TNGQLGHGESSDRNSPKIIEPLSL 383
K VQ CGW+ ++ V ++ SWG T G+LG+G++ ++S E +L
Sbjct: 413 KAVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTL 472
Query: 384 DG 385
DG
Sbjct: 473 DG 474
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 138/276 (50%), Gaps = 30/276 (10%)
Query: 111 DLFTPLPIKALHSLRVKQIACGD--SHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ 168
+L+ P L ++V+ +A G +H L +TVEG++ SWGRN GQLG G + VP+
Sbjct: 126 NLWGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPK 185
Query: 169 KLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDRE 228
+++ +G A G H++A+ E+G +Y +G + G LGLG++ D + + +
Sbjct: 186 LIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQ 245
Query: 229 KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLV-------PCQLEALRES- 280
+ VACG ++ + G LYS+G +YGQLGH ++ C+L A R +
Sbjct: 246 PITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAI 305
Query: 281 FISQ----------------ISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPV 324
FI + I+ G H++ + S +++ WG+ +G++G + D P
Sbjct: 306 FIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPR 365
Query: 325 QVK---FPLDQKVVQISCGWRHTLAVTERQNVFSWG 357
VK FP + QI G + AV+E +F WG
Sbjct: 366 LVKLFDFP-GRGAAQIYAGATCSFAVSEMGGLFFWG 400
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 39/350 (11%)
Query: 28 ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYS 87
A+HS+ + + SWGR + GQLGHGD + P + +L G V CG +HT A +
Sbjct: 150 AAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALT 209
Query: 88 ESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLR-VKQIACGDSHCLAVTVEGEVQ 146
E+ VY++G G+LG GN +D P P + L++ + + ++ACG + + +G +
Sbjct: 210 ENG-SVYAFGENKMGQLGLGNKTDA-VPSPAQILYNGQPITKVACGAEFSMIMDCKGNLY 267
Query: 147 SWGRNQNGQLGLGTT------------EDSLVPQKLQAF------------EGVSIKMVA 182
S+G + GQLG + + L+ +++ F V ++ +A
Sbjct: 268 SFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIA 327
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDR--EKMVMVACGWRHT 240
G HS+ + ++ WG+G YG LG ++ D ++P V D + G +
Sbjct: 328 CGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCS 387
Query: 241 ISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGK 300
+VS G L+ +G + + + P ++ L + ++ G + ++ V +D
Sbjct: 388 FAVSEMGGLFFWGATNTSR------DSTMYPKAVQDLCGWKVRSLACG-KSSIIVAADES 440
Query: 301 LYGWGWN-KFGQVGVGDNVDHCSPV--QVKFPLDQKVVQISCGWRHTLAV 347
WG + FG++G GDN S +VK Q+ G HTL V
Sbjct: 441 TISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVV 490
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 139/305 (45%), Gaps = 41/305 (13%)
Query: 25 SAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCGADHT 83
+ G +H++AL V ++G + GQLG G+ D + SP Q+ +G I V CGA+ +
Sbjct: 199 ACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI-LYNGQPITKVACGAEFS 257
Query: 84 TAYSESCM-QVYSWGWGDFGRLGHGNSSDLFTPL------------------------PI 118
C +YS+G ++G+LGH + I
Sbjct: 258 MIM--DCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQI 315
Query: 119 KALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ--KLQAFEGV 176
+ ++ V+ IACG +H L + + V SWG G+LG D +VP+ KL F G
Sbjct: 316 LPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGR 375
Query: 177 SIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACG 236
+ AGA S AV+E G L+ WG R+ + P+ V + K+ +ACG
Sbjct: 376 GAAQIYAGATCSFAVSEMGGLFFWGATNT------SRDSTMYPKAVQDLCGWKVRSLACG 429
Query: 237 WRHTISVSSSGRLYSYGWS-KYGQLGHGD--FKDHLVPCQLEALRESFISQISGGWRHTM 293
+ +I V++ S+G S +G+LG+GD K +++ L + Q+ G HT+
Sbjct: 430 -KSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTL 488
Query: 294 AVTSD 298
V D
Sbjct: 489 VVARD 493
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 105/256 (41%), Gaps = 39/256 (15%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIV---- 74
+P+ ++ GA S+ + + S+G E GQLGH ++ Q D I
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304
Query: 75 --------------------SVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFT 114
+ CG +H+ +S +V+SWG+G +GRLGH D
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLIL-DSQKRVFSWGFGGYGRLGHSEQRDEMV 363
Query: 115 PLPIKALH--SLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDS-LVPQKLQ 171
P +K QI G + AV+ G + WG T+ DS + P+ +Q
Sbjct: 364 PRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWGATN-------TSRDSTMYPKAVQ 416
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWG-RYGNLGLGDRNDR--LIPEKVATVDRE 228
G ++ +A G + S+ VA D WG +G LG GD + ++V T+D
Sbjct: 417 DLCGWKVRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGI 475
Query: 229 KMVMVACGWRHTISVS 244
V G HT+ V+
Sbjct: 476 YSDQVIMGNSHTLVVA 491
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALD--GHEIVSVTCGAD 81
I+ G +HS+ L S V SWG G G+LGH + D + P + D G + GA
Sbjct: 326 IACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGAT 385
Query: 82 HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTV 141
+ A SE ++ WG + R S ++ P ++ L +V+ +ACG S +
Sbjct: 386 CSFAVSE-MGGLFFWGATNTSR-----DSTMY-PKAVQDLCGWKVRSLACGKSSIIVAAD 438
Query: 142 EGEVQSWGRNQN-GQLGLG--TTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAED 194
E + SWG + G+LG G + S Q+++ +G+ V G H++ VA D
Sbjct: 439 ESTI-SWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVVARD 493
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 151/323 (46%), Gaps = 9/323 (2%)
Query: 93 VYSWGWGDFGRLGHGNSSDLFTPLPIKAL-HSLRVKQIACGDSHCLAVTVEGEVQSWGRN 151
+++WG +G+LG G+ D+F P + + +K + G H VT G++ G N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76
Query: 152 QNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLG 211
++GQLGLG TE+ L + G I+ VA G + ++ + E G++ G +G LG+
Sbjct: 77 KDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVP 136
Query: 212 DRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGW---SKYGQLGHGD---- 264
+ + + REK+V VA G RH ++ +++G ++ +G S +L G
Sbjct: 137 HGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPL 196
Query: 265 FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV-GDNVDHCSP 323
F P ++ L S G H+ ++T G+LY WG NK GQ+ +
Sbjct: 197 FLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQR 256
Query: 324 VQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSL 383
++ + D+KV + GW H +A TE VF+WGR GQLG + + SL
Sbjct: 257 IEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSL 316
Query: 384 DGSKGQNIASSKYDPSSGKTWVS 406
QN S +G T +S
Sbjct: 317 AFQGPQNSVPSPLHCLTGATEIS 339
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 164/362 (45%), Gaps = 48/362 (13%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
++ G HS + G + G +DGQLG G E+ L T L G I V CG D T
Sbjct: 54 VTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFT 113
Query: 84 TAYSESCMQVYSWGWGDFGRLG--HGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTV 141
+E QV S G FG+LG HG P I+ L +V +A G H LA T
Sbjct: 114 IMLTEK-GQVLSCGSNAFGQLGVPHG-PRKCVVPQAIECLRE-KVVCVAAGLRHALATTA 170
Query: 142 EGEVQSWGR-----------NQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVA 190
G V WG QN L L E P ++ E + AG++HS +
Sbjct: 171 TGSVFQWGTGLASSGRRLCPGQNLPLFLTAKE----PSRVTGLENSTAVCAVAGSDHSAS 226
Query: 191 VAEDGELYGWGWGRYGNLGLGDRNDRL-IPEKVAT--VDREKMVMVACGWRHTISVSSSG 247
+ + GELY WG ++G L R L +P+++ EK+ V GW H ++ + +G
Sbjct: 227 LTDTGELYVWGRNKHGQ--LASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETG 284
Query: 248 RLYSYGWSKYGQLGHG----------------DFK--DHLVPCQLEALRESFISQISGGW 289
+++++G + YGQLG F+ + VP L L + ++IS G
Sbjct: 285 KVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGA--TEISCGS 342
Query: 290 RHTMAVTSDGKLYGWGWNKFGQVGVG--DNVDHCSPVQVKFPLDQKVVQISCGWRHTLAV 347
H +AV D K WGWN+ G G G NV +PVQ P +++ + CG H+LAV
Sbjct: 343 EHNLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAV 401
Query: 348 TE 349
+
Sbjct: 402 CQ 403
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 178/419 (42%), Gaps = 64/419 (15%)
Query: 1 MAEASAASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL 60
MA S ASE S A F +WG GQLG G ED
Sbjct: 1 MARESCASETVSAAAVLF-----------------------AWGANSYGQLGLGHKEDVF 37
Query: 61 SPTQLSAL-DGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIK 119
P QLS I SVT G H+ ++ ++ G G+LG G++ ++ K
Sbjct: 38 LPQQLSDFCQAGCIKSVTGGGGHSAVVTDG-GDLFVCGLNKDGQLGLGHTEEVLRFTICK 96
Query: 120 ALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSLVPQKLQAFEGVSI 178
L ++Q+ACG + +T +G+V S G N GQLG+ +VPQ ++ +
Sbjct: 97 PLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLR-EKV 155
Query: 179 KMVAAGAEHSVAVAEDGELYGWGWG--RYGNLGLGDRNDRLI-----PEKVATVDREKMV 231
VAAG H++A G ++ WG G G +N L P +V ++ V
Sbjct: 156 VCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAV 215
Query: 232 MVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEA--LRESFISQISGGW 289
G H+ S++ +G LY +G +K+GQL L P ++EA ++ ++ + GW
Sbjct: 216 CAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPL-PQRIEAHYFQDEKVTAVWSGW 274
Query: 290 RHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQK---------------- 333
H +A T GK++ WG +GQ+G P + + P++Q
Sbjct: 275 THLVAKTETGKVFTWGRADYGQLG-----RRLEPPEAQKPVEQDSSLAFQGPQNSVPSPL 329
Query: 334 -----VVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSK 387
+ISCG H LAV R SWG +G G G S+ +P ++ L S+
Sbjct: 330 HCLTGATEISCGSEHNLAVI-RDKCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSR 387
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 38/254 (14%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRG---EDGQLGHGDAEDRL----SPTQLSALDGHEI 73
V+ ++AG H++A + V WG G +L G P++++ L+
Sbjct: 155 VVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTA 214
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLP--IKA--LHSLRVKQI 129
V G+DH+ + +++ ++Y WG G+L S +F PLP I+A +V +
Sbjct: 215 VCAVAGSDHSASLTDT-GELYVWGRNKHGQLA---SRAVFLPLPQRIEAHYFQDEKVTAV 270
Query: 130 ACGDSHCLAVTVEGEVQSWGRNQNGQLGL---------GTTEDS---------LVPQKLQ 171
G +H +A T G+V +WGR GQLG +DS VP L
Sbjct: 271 WSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLH 330
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATV--DREK 229
G + ++ G+EH++AV D + WGW +G G G ++ P V + +
Sbjct: 331 CLTGAT--EISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSR 387
Query: 230 MVMVACGWRHTISV 243
+++V CG H+++V
Sbjct: 388 LLLVGCGAGHSLAV 401
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 27/209 (12%)
Query: 7 ASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS 66
A E + T + AG+ HS +L + WGR + GQL L P ++
Sbjct: 200 AKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPL-PQRIE 258
Query: 67 A--LDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLG------------HGNSSDL 112
A ++ +V G H A +E+ +V++WG D+G+LG +SS
Sbjct: 259 AHYFQDEKVTAVWSGWTHLVAKTET-GKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLA 317
Query: 113 F------TPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV 166
F P P+ L +I+CG H LAV + + SWG N++G G GT +
Sbjct: 318 FQGPQNSVPSPLHCLTG--ATEISCGSEHNLAV-IRDKCCSWGWNEHGMCGDGTESNVWT 374
Query: 167 PQKLQAFEGVS--IKMVAAGAEHSVAVAE 193
P +QA + +V GA HS+AV +
Sbjct: 375 PTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 151/314 (48%), Gaps = 56/314 (17%)
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEG--VSIKMVA 182
R + IACG H L ++ G++ +WG N+ GQ G+G S L +G +I+ +A
Sbjct: 777 RPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVG---HSFRIANLHQVDGDWPAIEKIA 833
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRN--DRLIPEKVATVDREKMVMVACGWRHT 240
G HS + DG L+ +GWG +G LG G RN ++L+P +V + K+ +ACG HT
Sbjct: 834 CGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLIC-KVTQIACGRAHT 892
Query: 241 ISVSSSGRLYSYGWSKYGQLG-HGDFKD--HLVPCQLEALRESFISQISGGWRHTMAVTS 297
+ ++ +GR+ G YGQ+G D K P L LR + I+ + H++ +T
Sbjct: 893 VVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR---VRDIATHYYHSICITE 949
Query: 298 DGKLYGWGWN------------KFGQVGVGDNVDHCSPV--------------------- 324
D +++ WG N K + + D SP
Sbjct: 950 DNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPRE 1009
Query: 325 -----QVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSP-KII 378
+VK LD +V ++CG H+ +T +++WG+G + QLGHG ++R P ++
Sbjct: 1010 DLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVF 1069
Query: 379 EPLSLDGSKGQNIA 392
EP +G+K N++
Sbjct: 1070 EP---NGAKWVNVS 1080
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 155/338 (45%), Gaps = 57/338 (16%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH--EIVSVTCGAD 81
I+ GA H + L S + +WG GQ G G + L +DG I + CG
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHS---FRIANLHQVDGDWPAIEKIACGQF 837
Query: 82 HTTAYSESCMQVYSWGWGDFGRLGHG--NSSDLFTPLPIKALHSLRVKQIACGDSHCLAV 139
H +A+ S ++++GWG +G+LGHG N+S+ P + L +V QIACG +H + +
Sbjct: 838 H-SAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGL-ICKVTQIACGRAHTVVL 895
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVS-----IKMVAAGAEHSVAVAED 194
T G V G GQ+G+ +D + +K+ AF + ++ +A HS+ + ED
Sbjct: 896 TDTGRVLVCGSGSYGQMGV---DDDI--KKVFAFTPLPLGPLRVRDIATHYYHSICITED 950
Query: 195 GELYGWGWG--------------RYGNL--------------GLGDRNDRLIPEKVATVD 226
++ WG R L G R + +P ++ D
Sbjct: 951 NRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPRED 1010
Query: 227 ---RE-------KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEA 276
RE +V VACG H+ ++S G LY++G QLGHG+ + + P Q+
Sbjct: 1011 LGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFE 1070
Query: 277 LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV 314
+ +S G HT+A T DG ++ WG N FGQ GV
Sbjct: 1071 PNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 105/197 (53%), Gaps = 7/197 (3%)
Query: 166 VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATV 225
+P+ L+ + G + +A GAEH + ++ G+L WG R+G G+G + R+
Sbjct: 767 LPRVLE-YPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVG-HSFRIANLHQVDG 824
Query: 226 DREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG--DFKDHLVPCQLEALRESFIS 283
D + +ACG H+ + S G L+++GW +GQLGHG + + LVP ++ L ++
Sbjct: 825 DWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CKVT 883
Query: 284 QISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPL-DQKVVQISCGWR 342
QI+ G HT+ +T G++ G +GQ+GV D++ PL +V I+ +
Sbjct: 884 QIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAF-TPLPLGPLRVRDIATHYY 942
Query: 343 HTLAVTERQNVFSWGRG 359
H++ +TE VF WGR
Sbjct: 943 HSICITEDNRVFEWGRN 959
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 26/176 (14%)
Query: 233 VACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWR-- 290
+ACG H + +SSSG+L ++G +++GQ G G + R + + Q+ G W
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVG-----------HSFRIANLHQVDGDWPAI 829
Query: 291 --------HTMAVTSDGKLYGWGWNKFGQVGVG--DNVDHCSPVQVKFPLDQKVVQISCG 340
H+ + SDG L+ +GW +GQ+G G +N + P +V L KV QI+CG
Sbjct: 830 EKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVN-GLICKVTQIACG 888
Query: 341 WRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIASSKY 396
HT+ +T+ V G G+ GQ+G + D PL L + ++IA+ Y
Sbjct: 889 RAHTVVLTDTGRVLVCGSGSYGQMGVDD--DIKKVFAFTPLPLGPLRVRDIATHYY 942
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 68 LDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVK 127
LDG+ IVSV CG H+ A S +Y+WG G +LGHGN ++ P + + +
Sbjct: 1020 LDGN-IVSVACGLSHS-ALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWV 1077
Query: 128 QIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTED 163
++ G++H +A T +G V +WG+N GQ G+ T ++
Sbjct: 1078 NVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKN 1113
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 16/296 (5%)
Query: 65 LSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSL 124
L G I V CG T ++ + + ++G G G LGHG+ +D+ P ++AL
Sbjct: 385 LEGQSGVTIKHVACGDFFTACLTDRGI-IMTFGSGSNGCLGHGSLTDISQPTIVEALLGY 443
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAG 184
+ Q+ACG SH LA++ E E+ +WGR +G+LGLGT E PQ++ G + V G
Sbjct: 444 EMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCG 503
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLGDRN--DRLIPEK------------VATVDREKM 230
+ S+ + G+ G R+ LGL + + +P + A +D+E +
Sbjct: 504 IDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPL 563
Query: 231 VMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWR 290
+ + G H+ +V++SG Y++G +++GQLG + PC+++ L ++ ++ G
Sbjct: 564 LSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDA 623
Query: 291 HTMAVTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPLDQKVVQISCGWRHTL 345
T+A+ ++ ++Y WG G++G D + PVQ+ V +SC +TL
Sbjct: 624 FTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTL 679
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 20/283 (7%)
Query: 126 VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA 185
+K +ACGD +T G + ++G NG LG G+ D P ++A G + VA GA
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGA 452
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSS 245
H +A++ + EL+ WG G G LGLG R P++V ++ V CG ++ ++
Sbjct: 453 SHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTV 512
Query: 246 SGRLYSYGWSKYGQLG--HGDFKDHLVPCQL--EAL-----------RESFISQISGGWR 290
G+ + G +++ +LG H + VP Q EAL +E +S I G
Sbjct: 513 PGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLS-IDLGTA 571
Query: 291 HTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTER 350
H+ AVT+ G Y +G N+ GQ+G +P +V+ K+ ++CG T+A+
Sbjct: 572 HSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAE 631
Query: 351 QNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 393
V+SWG+G G+LG D P+ P+ LD + + S
Sbjct: 632 SEVYSWGKGARGRLGR-RDEDAGLPR---PVQLDETHPYTVTS 670
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 133/279 (47%), Gaps = 18/279 (6%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
++ G + L I+ ++G G +G LGHG D PT + AL G+E+V V CGA H
Sbjct: 396 VACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHV 455
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEG 143
A S ++++WG GD GRLG G P + +++ CG + +TV G
Sbjct: 456 LALSTE-RELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPG 514
Query: 144 EVQSWGRNQNGQLGLG--TTEDSLVPQKLQAFEGVSIKMVAA-------------GAEHS 188
+ + G N+ +LGL + + VP + Q E +S ++ + G HS
Sbjct: 515 QALACGSNRFNKLGLDHLSLGEEPVPHQ-QVEEALSFTLLGSAPLDQEPLLSIDLGTAHS 573
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGR 248
AV G+ Y +G ++G LG R P KV ++ KM MVACG T+++ +
Sbjct: 574 AAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESE 633
Query: 249 LYSYGWSKYGQLGHGDFKDHLV-PCQLEALRESFISQIS 286
+YS+G G+LG D L P QL+ ++ +S
Sbjct: 634 VYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVS 672
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 144/325 (44%), Gaps = 44/325 (13%)
Query: 93 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQ 152
VY+WG G L TPL + L++ V Q+A G + VT G + W
Sbjct: 314 VYAWGGG------------LGTPLRLPMLNT-EVVQVAAGRTQKAGVTRSGRLILWEAPP 360
Query: 153 ----NGQLGLGTTED---SLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRY 205
G L G E + + L+ GV+IK VA G + + + G + +G G
Sbjct: 361 LGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSN 420
Query: 206 GNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDF 265
G LG G D P V + +MV VACG H +++S+ L+++G G+LG G
Sbjct: 421 GCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTR 480
Query: 266 KDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS--- 322
+ H P Q+ ++ G +M +T G+ G N+F ++G +DH S
Sbjct: 481 ESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLG----LDHLSLGE 536
Query: 323 -PV---QVK----------FPLDQK-VVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 367
PV QV+ PLDQ+ ++ I G H+ AVT + +++G +GQLG
Sbjct: 537 EPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTN 596
Query: 368 ESSDRNSPKIIEPLSLDGSKGQNIA 392
+P ++ L+G K +A
Sbjct: 597 TRRGSRAPCKVQ--GLEGIKMAMVA 619
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 9 EAASTT---AAPF--RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPT 63
EA S T +AP P+L I G +HS A+ + ++G + GQLG +P
Sbjct: 546 EALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPC 605
Query: 64 QLSALDGHEIVSVTCGADHTTAY-SESCMQVYSWGWGDFGRLGHGNS-SDLFTPLPIKAL 121
++ L+G ++ V CG T A +ES +VYSWG G GRLG + + L P+ +
Sbjct: 606 KVQGLEGIKMAMVACGDAFTVAIGAES--EVYSWGKGARGRLGRRDEDAGLPRPVQLDET 663
Query: 122 HSLRVKQIAC 131
H V ++C
Sbjct: 664 HPYTVTSVSC 673
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 164/360 (45%), Gaps = 36/360 (10%)
Query: 19 RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
R V I+ G HS + G + G +DGQLG G ED T +L G I V C
Sbjct: 49 RSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVAC 108
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLG--HGNSSDLFTPLPIKALHSLRVKQIACGDSHC 136
G D T +E+ QV S G FG+LG HG P I+ LH +V IA G H
Sbjct: 109 GWDFTIMLTEN-GQVLSCGSNSFGQLGVPHG-PRRCVVPQAIE-LHKEKVVCIAAGLRHA 165
Query: 137 LAVTVEGEVQSWG--------RNQNGQ-LGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEH 187
+A T G V WG R GQ L L T P ++ E V AG++H
Sbjct: 166 VAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE--PSRVTGLENSKAMCVLAGSDH 223
Query: 188 SVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVA--TVDREKMVMVACGWRHTISVSS 245
S ++ + GE+Y WG ++G L + +P+K+ EK+ + GW H ++ +
Sbjct: 224 SASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE 282
Query: 246 SGRLYSYGWSKYGQLGHG---------DFKDHLVPCQLEALRE-------SFISQISGGW 289
+G+++++G + YGQLG + +D +PC + +++S G
Sbjct: 283 TGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGS 342
Query: 290 RHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTE 349
H +A+ G Y WGWN+ G G G + +P V+ L + + CG H+LA+ +
Sbjct: 343 EHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 43/367 (11%)
Query: 48 DGQLGHGDAEDRLSPTQLSAL-DGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGH 106
GQLG G ED L P QL+ + +T G H+ ++ ++ G G+LG
Sbjct: 25 YGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDG-GDLFVCGLNKDGQLGL 83
Query: 107 GNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT-TEDSL 165
G++ D+ P K+L ++Q+ACG + +T G+V S G N GQLG+ +
Sbjct: 84 GHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCV 143
Query: 166 VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLI------- 218
VPQ ++ + +AAG H+VA G ++ WG GL RL
Sbjct: 144 VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWG------TGLASCGRRLCPGQTLPL 196
Query: 219 ------PEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPC 272
P +V ++ K + V G H+ S++ +G +Y +G +K+GQL + + VP
Sbjct: 197 FFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQ 255
Query: 273 QLEA--LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVG------------DNV 318
++EA + ++ I GW H +A T GK++ WG +GQ+G D+
Sbjct: 256 KIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSF 315
Query: 319 DHCSPVQVKFPLDQKVV----QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNS 374
CS P + ++SCG H LA+ +SWG +G G G ++ +
Sbjct: 316 LPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGV-CYSWGWNEHGMCGDGTEANVWA 374
Query: 375 PKIIEPL 381
PK ++ L
Sbjct: 375 PKPVQAL 381
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 7 ASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS 66
A E + T + + AG+ HS +L V WG + GQL + +A P ++
Sbjct: 200 AKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIE 258
Query: 67 A--LDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHG---------NSSDLFTP 115
A ++ ++ G H A +E+ ++++WG D+G+LG D F P
Sbjct: 259 AHCFQNEKVTAIWSGWTHLVAQTET-GKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLP 317
Query: 116 L--PIKAL----HSLR-VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ 168
P ++ H L +++CG H LA+ + G SWG N++G G GT + P+
Sbjct: 318 CSRPPNSMPSSPHCLTGATEVSCGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPK 376
Query: 169 KLQAFEGVSIKMVAAGAEHSVAVAE 193
+QA S +V GA HS+A+ +
Sbjct: 377 PVQALLSSSGLLVGCGAGHSLALCQ 401
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 174/349 (49%), Gaps = 30/349 (8%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGD-----AEDRLSPTQLSAL----DGH 71
V+ +S G + + + + +W E +G G+ A +++ P +S G
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLITW---EAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGV 398
Query: 72 EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC 131
I SV+CG TT ++ + + ++G G G LGHGN +D+ P ++AL + Q++C
Sbjct: 399 TIKSVSCGDLFTTCLTDRGI-IMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSC 457
Query: 132 GDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAV 191
G SH LAVT E EV SWGR NG+LGL T + PQ++ + V G + S+ +
Sbjct: 458 GASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIM 517
Query: 192 AEDGELYGWGWGRYGNLGLGDRNDRLIP------EKV--------ATVDREKMVMVACGW 237
+ ++ G R+ LGL + P E+V A ++ EK+V + G
Sbjct: 518 STQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGT 577
Query: 238 RHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTS 297
H+++V+ G+ +++G +++GQLG + VP Q+ L+ I+ + G T+A+ +
Sbjct: 578 AHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQG--ITMAACGDAFTLAIGA 635
Query: 298 DGKLYGWGWNKFGQVGVG-DNVDHCSPVQVKFPLDQKVVQISCGWRHTL 345
+G++Y WG G++G ++ PVQ+ V ++C +TL
Sbjct: 636 EGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVACCHGNTL 684
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 20/282 (7%)
Query: 126 VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA 185
+K ++CGD +T G + ++G NG LG G D P+ ++A G + V+ GA
Sbjct: 400 IKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGA 459
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSS 245
H +AV + E++ WG G G LGL ++ P++V+ + V CG ++ +S+
Sbjct: 460 SHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMST 519
Query: 246 SGRLYSYGWSKYGQLGHGDFKDHLVP---CQLE-----------ALRESFISQISGGWRH 291
++ + G +++ +LG P CQ+E L I I G H
Sbjct: 520 QHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAH 579
Query: 292 TMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQ 351
++AVT G+ + +G N+ GQ+G P QV Q + +CG TLA+
Sbjct: 580 SVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSG--LQGITMAACGDAFTLAIGAEG 637
Query: 352 NVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 393
V++WG+G G+LG E D PK P+ LD S + S
Sbjct: 638 EVYTWGKGARGRLGRKE-EDFGIPK---PVQLDESHAFTVTS 675
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 153/322 (47%), Gaps = 40/322 (12%)
Query: 93 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQ 152
VY+WG G + TPL + L++ V Q++ G + + VT G + +W
Sbjct: 322 VYTWGSG------------ISTPLRLPMLNT-EVIQVSLGRTQKMGVTKSGRLITWEAPS 368
Query: 153 --NGQLGLGTTEDSLVPQKLQAF----EGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYG 206
+G+ L + + PQ + F GV+IK V+ G + + + G + +G G G
Sbjct: 369 VGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNG 428
Query: 207 NLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFK 266
LG G+ ND P+ V + ++V V+CG H ++V++ ++S+G G+LG
Sbjct: 429 CLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQD 488
Query: 267 DHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD------- 319
H P Q+ + ++ G +M +++ ++ G N+F ++G+ D V
Sbjct: 489 SHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGL-DKVSGTEEPSS 547
Query: 320 HCSPVQVKF-------PLD-QKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSD 371
C +V PL+ +K+V I G H++AVTE+ F++G +GQLG S
Sbjct: 548 FCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLG---CSH 604
Query: 372 RNSPKIIEPLSLDGSKGQNIAS 393
R S ++ P + G +G +A+
Sbjct: 605 RRSSRV--PYQVSGLQGITMAA 624
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 162/340 (47%), Gaps = 21/340 (6%)
Query: 82 HTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKAL-HSLRVKQIACGDSHCLAVT 140
H++ + +++WG +G+LG G+ D+ + + S +K+I G H VT
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVT 65
Query: 141 VEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGW 200
EG + G N++GQLGLG TE+ L ++ G +I+ VA G + ++ + E+G++
Sbjct: 66 DEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSC 125
Query: 201 GWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGW---SKY 257
G +G LG+ R + + + REK+V +A G RH ++ ++SG ++ +G S
Sbjct: 126 GSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSG 185
Query: 258 GQLGHGD----FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 313
+L G F P + L S + G H+ ++T G+LY WG NK GQ+
Sbjct: 186 RRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA 245
Query: 314 V-GDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLG------H 366
+ ++ + ++K+ + GW H +A T VF+WGR GQLG
Sbjct: 246 SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETRE 305
Query: 367 GESSDRNSPKIIEPLSLDGSKGQNIASSKYDPSSGKTWVS 406
G S++ P SL GS Q S +G T +S
Sbjct: 306 GWESEKQDP------SLPGSGPQKGTPSCLPCLTGATEIS 339
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 169/386 (43%), Gaps = 43/386 (11%)
Query: 31 SVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSAL-DGHEIVSVTCGADHTTAYSES 89
S A+ + + +WG GQLG G ED LS QLS I +T G H+ ++
Sbjct: 8 SEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDE 67
Query: 90 CMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWG 149
++ G G+LG G++ ++ P K+L ++Q+ACG + +T G+V S G
Sbjct: 68 -GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCG 126
Query: 150 RNQNGQLGLGT-TEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNL 208
N GQLG+ ++PQ ++ + +AAG H++A G ++ WG
Sbjct: 127 SNSFGQLGVPHGPRRCVIPQAIELLR-EKVVSIAAGLRHALAATASGTVFQWG------T 179
Query: 209 GLGDRNDRLIP-------------EKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWS 255
GL RL P V ++ + V V G H+ S++ +G LY +G +
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSN 239
Query: 256 KYGQLGHGDFKDHLVPCQLEA--LRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 313
K+GQL L+P ++EA + I+ + GW H +A T GK++ WG +GQ+G
Sbjct: 240 KHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLG 298
Query: 314 ---------VGDNVDHCSP-------VQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWG 357
+ D P P +ISCG H LAV SWG
Sbjct: 299 RTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVI-GGVCHSWG 357
Query: 358 RGTNGQLGHGESSDRNSPKIIEPLSL 383
+G G G +D +PK + L
Sbjct: 358 WNEHGMCGDGTEADVWAPKPVPGLRF 383
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 164/367 (44%), Gaps = 42/367 (11%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
I+ G HS + + G +DGQLG G E+ L T +L G I V CG D T
Sbjct: 54 ITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFT 113
Query: 84 TAYSESCMQVYSWGWGDFGRLG--HGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTV 141
+E+ QV S G FG+LG HG + P I+ L +V IA G H LA T
Sbjct: 114 IILTEN-GQVLSCGSNSFGQLGVPHGPRRCVI-PQAIELLRE-KVVSIAAGLRHALAATA 170
Query: 142 EGEVQSWGR---NQNGQLGLGTTEDSLV----PQKLQAFEGVSIKMVAAGAEHSVAVAED 194
G V WG + +L G T + P + E V AG++HS ++ +
Sbjct: 171 SGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDA 230
Query: 195 GELYGWGWGRYGNLGLGDRNDRLIPEKVAT--VDREKMVMVACGWRHTISVSSSGRLYSY 252
GELY WG ++G L L+P+++ EK+ V GW H ++ + +G+++++
Sbjct: 231 GELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTW 289
Query: 253 GWSKYGQLGH------------------GDFKDHLVPCQLEALRESFISQISGGWRHTMA 294
G + YGQLG G P L L + ++IS G H +A
Sbjct: 290 GRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGA--TEISCGSEHNLA 347
Query: 295 VTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV---KFPLDQKVVQISCGWRHTLAVTERQ 351
V G + WGWN+ G G G D +P V +F L + + CG H+LA+ +
Sbjct: 348 VIG-GVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLG---LHVGCGAGHSLALCQLP 403
Query: 352 NVFSWGR 358
+ + G+
Sbjct: 404 ALPALGQ 410
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 32/260 (12%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRG---EDGQLGHGDAEDRL----SPTQLSALDGHEI 73
V+ I+AG H++A + V WG G +L G P+ ++ L+ +
Sbjct: 155 VVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQA 214
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKA--LHSLRVKQIAC 131
V V G+DH+ + +++ ++Y WG G+L ++ L P I+A + ++ +
Sbjct: 215 VCVLAGSDHSASLTDA-GELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWS 272
Query: 132 GDSHCLAVTVEGEVQSWGRNQNGQLGL------------------GTTEDSLVPQKLQAF 173
G +H +A TV G+V +WGR GQLG G+ P L
Sbjct: 273 GWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCL 332
Query: 174 EGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMV 233
G + ++ G+EH++AV G + WGW +G G G D P+ V + + V
Sbjct: 333 TGAT--EISCGSEHNLAVI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHV 389
Query: 234 ACGWRHTISVSSSGRLYSYG 253
CG H++++ L + G
Sbjct: 390 GCGAGHSLALCQLPALPALG 409
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 7 ASEAASTTAAPFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS 66
A E ++ T + + AG+ HS +L + WG + GQL A L P ++
Sbjct: 200 AKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIE 258
Query: 67 A--LDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGH------------------ 106
A +I +V G H A + + +V++WG D+G+LG
Sbjct: 259 ARCFQNEKIAAVWSGWTHLVAQTVT-GKVFTWGRADYGQLGRTVETREGWESEKQDPSLP 317
Query: 107 GNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV 166
G+ TP + L +I+CG H LAV + G SWG N++G G GT D
Sbjct: 318 GSGPQKGTPSCLPCLTG--ATEISCGSEHNLAV-IGGVCHSWGWNEHGMCGDGTEADVWA 374
Query: 167 PQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
P+ + V GA HS+A+ + L G
Sbjct: 375 PKPVPGLRFFLGLHVGCGAGHSLALCQLPALPALG 409
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 165/355 (46%), Gaps = 30/355 (8%)
Query: 24 ISAGASHSVALLSGNIVCSW-----GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ AG +H + + +W G GQLGHGD P + L G I V+C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 433
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSS--DLFTPLPIKALHSLRVKQIACGDSHC 136
G D T ++ Q+Y++G +G +G + ++ P+ + S V+Q++CGD+H
Sbjct: 434 GDDFTVCVTDE-GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492
Query: 137 LAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
+ +T EV SWG + G+LGL + ED PQK+ + + I V G + + + + G+
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKVA---------TVDRE----KMVMVACGWRHTISV 243
+ G + LGL +I + T+ ++ K+ +A G HT ++
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Query: 244 SSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTSDGKLY 302
GRL ++G +K GQLG G++K L + L + ++S G T+A T D ++
Sbjct: 613 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIF 672
Query: 303 GWGWNKFGQVGVGDNV-DHCSPVQVKFPLD-----QKVVQISC-GWRHTLAVTER 350
WG G++ + H S + +P V +SC GW HT+ + E+
Sbjct: 673 AWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGW-HTILIVEK 726
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 140/302 (46%), Gaps = 33/302 (10%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS-LRVKQIACGDSHCLAVTVEGEVQSW-- 148
+VY WG G TP + + S +Q+ G++H VTVE E+ +W
Sbjct: 348 EVYVWGGGKS------------TPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVN 395
Query: 149 ---GRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRY 205
G +GQLG G P+ ++ +G +I+ V+ G + +V V ++G+LY +G Y
Sbjct: 396 MQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYY 455
Query: 206 GNLGLGDR--NDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG 263
G +G+ + L P ++ + V+CG H + ++ + +YS+G +YG+LG
Sbjct: 456 GCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLD 515
Query: 264 DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD---- 319
+D+ P +++ + I + G T +T GK+ G N+F ++G+ +
Sbjct: 516 SEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIIN 575
Query: 320 ----HCSPVQVKFPLDQ-----KVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESS 370
H P F L + K+ I+ G HT A+ ER + ++G GQLG G
Sbjct: 576 HEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYK 635
Query: 371 DR 372
R
Sbjct: 636 KR 637
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
PV +S G +H V L V SWG GE G+LG ED +P ++ IV+V CG
Sbjct: 481 PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGN------SSDLFTPLPI-------KALHSLRV 126
D T ++S +V + G +F +LG + + + +P K L ++
Sbjct: 541 CDGTFLLTQS-GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 127 KQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL-QAFEGVSIKMVAAGA 185
+ IA G +H A+ G + ++G N+ GQLG+G + L L G + V+ G
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGD 659
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGL 210
E ++A +D ++ WG G G L +
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS-ALDGHEIVSV 76
F + I+ G +H+ A+ + ++G + GQLG G+ + RL L L G +++ V
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 655
Query: 77 TCGADHTTAYSESCMQVYSWGWGDFGRLG-------HGNSSDLFTPLPIKALHSL-RVKQ 128
+CG + T A ++ +++WG G GRL HG SD+ T P SL V
Sbjct: 656 SCGDEFTIAATDD-NHIFAWGNGGNGRLAMTPTERPHG--SDICTSWPRPIFGSLHHVPD 712
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
++C H + + + R+ + L +GT S P
Sbjct: 713 LSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVFQSSSP 751
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 336 QISCGWRHTLAVTERQNVFSW-----GRGTNGQLGHGESSDRNSPKIIEPL 381
Q+ G H VT + +++W G +GQLGHG+ + PK +E L
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL 423
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 174/376 (46%), Gaps = 53/376 (14%)
Query: 40 VCSWGRGEDGQLGHGDAE------DRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQV 93
V +G G +LG G+ E RL+P + + D +V + G H+ A S +V
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNP--ILSTDKVGVVDLAVGGMHSAALSHDG-RV 129
Query: 94 YSWGWGD---FGRL--------GHGNSSDLFTPLPIK---ALHSLRVKQIACGDSHCLAV 139
Y+WG D GRL G +DL P K AL LRV ++ C D+ A+
Sbjct: 130 YTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAI 189
Query: 140 TVEGEVQSWG--RNQNGQLGLGTTEDSLV-PQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
T G +WG R +G LG ++ P +++ E I +A G +H +A+ G+
Sbjct: 190 TDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPE---ICQLATGTDHIIALTTTGK 246
Query: 197 LYGWGWGRYGNLGLGDRNDR----LIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSY 252
+Y WG G+ LG R L P+ +A + ++ V G H+ ++ + GR+Y++
Sbjct: 247 VYTWGNGQQFQLGRRMLERRRLQGLTPQPLAL---KNIISVGAGSYHSFAIDNKGRVYAW 303
Query: 253 GWSKYGQLGHG--DFKDHLV---PCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWN 307
G + Q G D ++ V P ++AL + I+GG HT+A+ DG++ WG +
Sbjct: 304 GLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRD 363
Query: 308 KFGQVGVGDNV------------DHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFS 355
Q+G+ DN ++ P V+Q+ CG H LAVT V+S
Sbjct: 364 DRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYS 423
Query: 356 WGRGTNGQLGHGESSD 371
WG N ++G G++ +
Sbjct: 424 WGSAENYEVGQGDNDE 439
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 150/339 (44%), Gaps = 53/339 (15%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLG---------HGDAEDRL----SPTQLS- 66
V+ ++ G HS AL V +WG +D LG +GD D +P+++
Sbjct: 110 VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG 169
Query: 67 ALDGHEIVSVTCGADHTTAYSES-CMQVYSWGWGDF----GRLGHGNSSDLFTPLPIKAL 121
AL + V C + T A +++ C + WG F G LG+ +S T P + +
Sbjct: 170 ALSHLRVTKVICSDNLTAAITDNGC----CFTWGTFRCSDGVLGYSDSQK-RTAEPTQ-M 223
Query: 122 HSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTE----DSLVPQKLQAFEGVS 177
+ Q+A G H +A+T G+V +WG Q QLG E L PQ L +S
Sbjct: 224 RLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIIS 283
Query: 178 IKMVAAGAEHSVAVAEDGELYGWGWG--RYGNLGLGDRNDRLIPEKVATVDREK---MVM 232
V AG+ HS A+ G +Y WG R + + D + + K VD + +
Sbjct: 284 ---VGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKS 340
Query: 233 VACGWRHTISVSSSGRLYSYGWSKYGQLGHGD-------FKDHL-------VPCQLEALR 278
+ G HT+++ GR+ ++G QLG D KD P + L
Sbjct: 341 ITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGL- 399
Query: 279 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDN 317
+ + Q+ G H +AVTSDGK+Y WG + +VG GDN
Sbjct: 400 -TNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDN 437
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 113/252 (44%), Gaps = 38/252 (15%)
Query: 8 SEAASTTAAP----FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR---- 59
S++ TA P + ++ G H +AL + V +WG G+ QLG E R
Sbjct: 211 SDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQG 270
Query: 60 LSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLG-----HGNSSDLFT 114
L+P L+ I+SV G+ H+ A ++ +VY+WG + G + +
Sbjct: 271 LTPQPLAL---KNIISVGAGSYHSFAI-DNKGRVYAWGLNITRQCGIEVEDEEEGAVITK 326
Query: 115 PLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFE 174
P + AL VK I G+ H LA+ +G V +WGR+ QLG+ D+ +P+ + E
Sbjct: 327 PTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGI---PDNALPETVVKDE 383
Query: 175 G---------------VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIP 219
++ V G H++AV DG++Y WG +G GD ++ +
Sbjct: 384 KGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDV-- 441
Query: 220 EKVATVDREKMV 231
V T+ R K +
Sbjct: 442 -AVPTLVRSKAI 452
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR------LSPTQLSALDGH 71
+ ++ + AG+ HS A+ + V +WG Q G + ED PT + AL+G+
Sbjct: 278 LKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGI-EVEDEEEGAVITKPTLVDALEGY 336
Query: 72 EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLG--------------HGNSSDLFTPLP 117
+ S+T G HT A E +V +WG D +LG GN+ L TP
Sbjct: 337 NVKSITGGEHHTLALLEDG-RVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTI 395
Query: 118 IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLG-TTEDSLVPQ--KLQAFE 174
I L + V Q+ CG H LAVT +G+V SWG +N ++G G ED VP + +A +
Sbjct: 396 IPGLTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIK 453
Query: 175 GVSIKMVAAGAEHSV 189
V+I++ AG + S+
Sbjct: 454 EVAIRVAGAGGQFSI 468
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 38/305 (12%)
Query: 115 PLPIKALHSL-RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLV--PQ--K 169
P P++ S R+ +I + L V V +G +LG+G E +V P+
Sbjct: 48 PKPVRVPGSAKRINKIPELPTERLNVYV------FGSGSMNELGMGEEEMDVVYRPRLNP 101
Query: 170 LQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGL---------GDR--NDRL- 217
+ + + V + +A G HS A++ DG +Y WG LG GD+ ND L
Sbjct: 102 ILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLE 161
Query: 218 -IPEKV-ATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKY--GQLGHGDFKDHLV-PC 272
P KV + ++ V C T +++ +G +++G + G LG+ D + P
Sbjct: 162 GTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPT 221
Query: 273 QLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVG----DNVDHCSPVQVKF 328
Q+ R I Q++ G H +A+T+ GK+Y WG + Q+G + +P +
Sbjct: 222 QM---RLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLAL 278
Query: 329 PLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKG 388
+ ++ + G H+ A+ + V++WG Q G + I +P +D +G
Sbjct: 279 ---KNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEG 335
Query: 389 QNIAS 393
N+ S
Sbjct: 336 YNVKS 340
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 165/355 (46%), Gaps = 30/355 (8%)
Query: 24 ISAGASHSVALLSGNIVCSW-----GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 78
+ AG +H + + +W G GQLGHGD P + L G I V+C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSC 433
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNSS--DLFTPLPIKALHSLRVKQIACGDSHC 136
G D T ++ Q+Y++G +G +G S ++ P+ + S V+Q++CGD+H
Sbjct: 434 GDDFTVCVTDE-GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492
Query: 137 LAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
+ +T EV SWG + G+LGL + ED PQ++ + + I V G + + + + G+
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKVA---------TVDRE----KMVMVACGWRHTISV 243
+ G + LGL +I + T+ ++ K+ +A G HT ++
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Query: 244 SSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTSDGKLY 302
GRL ++G +K GQLG G++K L + L + ++S G T+A T D ++
Sbjct: 613 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIF 672
Query: 303 GWGWNKFGQVGVGDN-VDHCSPVQVKFPLD-----QKVVQISC-GWRHTLAVTER 350
WG G++ + H S + +P V +SC GW HT+ + E+
Sbjct: 673 AWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGW-HTILIVEK 726
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 140/302 (46%), Gaps = 33/302 (10%)
Query: 92 QVYSWGWGDFGRLGHGNSSDLFTPLPIKALHS-LRVKQIACGDSHCLAVTVEGEVQSW-- 148
+VY WG G TP + + S +Q+ G++H VTVE E+ +W
Sbjct: 348 EVYVWGGGKS------------TPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVN 395
Query: 149 ---GRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRY 205
G +GQLG G P+ ++ +G +I V+ G + +V V ++G+LY +G Y
Sbjct: 396 MQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYY 455
Query: 206 GNLGLGDRN--DRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG 263
G +G+ + + L P ++ + V+CG H + ++ + +YS+G +YG+LG
Sbjct: 456 GCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLD 515
Query: 264 DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD---- 319
+D+ P +++ + I + G T +T GK+ G N+F ++G+ +
Sbjct: 516 SEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIIN 575
Query: 320 ----HCSPVQVKFPLDQ-----KVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESS 370
H P F L + K+ I+ G HT A+ ER + ++G GQLG G
Sbjct: 576 HEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYK 635
Query: 371 DR 372
R
Sbjct: 636 KR 637
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 185 AEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVAC-GWRHTISV 243
A +V + E+Y WG G+ P+K+ + C G H V
Sbjct: 337 APIAVVTSRTSEVYVWGGGKS------------TPQKLDVIKSGCSARQVCAGNTHFAVV 384
Query: 244 SSSGRLYSY-----GWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSD 298
+ LY++ G +GQLGHGD + P +E L+ I Q+S G T+ VT +
Sbjct: 385 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDE 444
Query: 299 GKLYGWGWNKFGQVGVGDNV---DHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFS 355
G+LY +G + +G +GV D V + P+Q+ F L V Q+SCG H + +T + V+S
Sbjct: 445 GQLYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYS 503
Query: 356 WGRGTNGQLGHGESSDRNSPKIIE 379
WG G G+LG D +P+ ++
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQRVD 527
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 20 PVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 79
PV +S G +H V L V SWG GE G+LG ED +P ++ IV+V CG
Sbjct: 481 PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 540
Query: 80 ADHTTAYSESCMQVYSWGWGDFGRLGHGN------SSDLFTPLPI-------KALHSLRV 126
D T ++S +V + G +F +LG + + + +P K L ++
Sbjct: 541 CDGTFLLTQS-GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 127 KQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKL-QAFEGVSIKMVAAGA 185
+ IA G +H A+ G + ++G N+ GQLG+G + L L G + V+ G
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGD 659
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGL 210
E ++A +D ++ WG G G L +
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 18 FRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS-ALDGHEIVSV 76
F + I+ G +H+ A+ + ++G + GQLG G+ + RL L L G +++ V
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 655
Query: 77 TCGADHTTAYSESCMQVYSWGWGDFGRLG-------HGNSSDLFTPLPIKALHSL-RVKQ 128
+CG + T A ++ +++WG G GRL HG SD+ T P SL V
Sbjct: 656 SCGDEFTIAATDD-NHIFAWGNGGNGRLAMTPTERPHG--SDICTSWPRPIFGSLHHVPD 712
Query: 129 IACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVP 167
++C H + + + R+ + L +GT S P
Sbjct: 713 LSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQSSSP 751
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 336 QISCGWRHTLAVTERQNVFSW-----GRGTNGQLGHGESSDRNSPKIIEPL 381
Q+ G H VT + +++W G +GQLGHG+ + PK +E L
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL 423
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats.
Identities = 94/369 (25%), Positives = 175/369 (47%), Gaps = 64/369 (17%)
Query: 71 HEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALH---SLRVK 127
+IV ++ GA H++ ++ +Y++G G G+LGHGN +P ++ SLRV
Sbjct: 188 QKIVLISTGAIHSSFITDQG-NLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVV 246
Query: 128 QIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGT---TEDSLVPQKLQ------------- 171
IA G H LA+T+ G+V SWG N + QLGLG + +PQ +
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNN 306
Query: 172 ---------------------------AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGR 204
+ I ++ G S + + G L+ +G G
Sbjct: 307 NNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGD 366
Query: 205 YGNLGLGDRNDRL--IPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH 262
+G LGLG+++ + P+ V ++ ++ ++ G H++ +++ G ++S+G + GQLG
Sbjct: 367 HGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGI 426
Query: 263 GDFKD-HLVPCQLEALRESF--------ISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 313
G F + +P Q++ + S I ++S G H++A++ + Y WG + +G +G
Sbjct: 427 GCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG 486
Query: 314 VGDNV--DHCSPVQVK---FPLDQ-KVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 367
+V D PV + +D K + +S G++H +A++ +++SWG +LG
Sbjct: 487 TSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFK 546
Query: 368 ESSDRNSPK 376
++ +PK
Sbjct: 547 SDENQLTPK 555
Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats.
Identities = 103/398 (25%), Positives = 184/398 (46%), Gaps = 73/398 (18%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH---EIVSVT 77
++LIS GA HS + + ++G G G+LGHG+ E SP + +VS+
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIA 249
Query: 78 CGADHTTAYSESCMQVYSWGWGDFGRL--GHGNSSDLFTPLP------------------ 117
G H+ A + C +VYSWG D +L G+G+SS ++ LP
Sbjct: 250 NGGKHSLALT-ICGKVYSWGGNDSCQLGLGNGSSSSYYS-LPQLINFNISYNNNNNNNNN 307
Query: 118 ------------------------IKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQN 153
+ +++ +++CG + +T +G + ++GR +
Sbjct: 308 NSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDH 367
Query: 154 GQLGLGTTEDSLV----PQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG 209
G+LGLG E SL+ P+ +Q+ +G I +++G HS+ + G ++ +G G LG
Sbjct: 368 GRLGLG--EQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG 425
Query: 210 LGD-RNDRLIPEKVATVDRE--------KMVMVACGWRHTISVSSSGRLYSYGWSKYGQL 260
+G N + IP+++ ++ V+ G H+I++S + Y++G S YG L
Sbjct: 426 IGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVL 485
Query: 261 GHG-DFK-DHLVPCQLEAL-----RESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 313
G D + D +P + + FI +S G++H +A++ DG LY WG N ++G
Sbjct: 486 GTSIDVQGDRNLPVLINSNSVVVDNVKFID-VSSGFQHNVAMSIDGSLYSWGCNAGQRLG 544
Query: 314 VGDNVDHCSPVQVKF-PLDQKVVQISCGWRHTLAVTER 350
+ + +P + D K + +CG T+ V +R
Sbjct: 545 FKSDENQLTPKKCFINSKDSKPLLFTCGEIITIIVEKR 582
Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats.
Identities = 72/320 (22%), Positives = 147/320 (45%), Gaps = 63/320 (19%)
Query: 125 RVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFE---GVSIKMV 181
++ I+ G H +T +G + ++G G+LG G E P+ ++ F+ + + +
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSI 248
Query: 182 AAGAEHSVAVAEDGELYGWGWGRYGNLGLGD---RNDRLIPEKV---------------- 222
A G +HS+A+ G++Y WG LGLG+ + +P+ +
Sbjct: 249 ANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNN 308
Query: 223 ------------------------ATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYG 258
+ ++ K+V ++CG + ++ G L+++G +G
Sbjct: 309 STNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHG 368
Query: 259 QLGHGD--FKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGD 316
+LG G+ P +++L+ FI +S G H++ +T+ G ++ +G N GQ+G+G
Sbjct: 369 RLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGC 428
Query: 317 NVDHCS-PVQV----------KFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLG 365
+ + P Q+ + P++ ++++S G H++A+++ + ++WGR G LG
Sbjct: 429 FSNQQTIPKQIQWFQTSQQQQQQPIN--IIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG 486
Query: 366 HG--ESSDRNSPKIIEPLSL 383
DRN P +I S+
Sbjct: 487 TSIDVQGDRNLPVLINSNSV 506
Score = 79.0 bits (193), Expect = 7e-14, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 52/215 (24%)
Query: 226 DREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRES---FI 282
+++K+V+++ G H+ ++ G LY++G G+LGHG+ + + P +E + +
Sbjct: 186 NQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRV 245
Query: 283 SQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS---PVQVKFPLDQ------- 332
I+ G +H++A+T GK+Y WG N Q+G+G+ P + F +
Sbjct: 246 VSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNN 305
Query: 333 ---------------------------------KVVQISCGWRHTLAVTERQNVFSWGRG 359
K+V++SCG + +T++ +F++GRG
Sbjct: 306 NNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRG 365
Query: 360 TNGQLGHGESS--DRNSPKIIEPLS----LDGSKG 388
+G+LG GE S +++PK+++ L +D S G
Sbjct: 366 DHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSG 400
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 275 EALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQ-- 332
E + I IS G H+ +T G LY +G G++G G+ + SP V+F +
Sbjct: 183 EMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPS 242
Query: 333 -KVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 367
+VV I+ G +H+LA+T V+SWG + QLG G
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLG 278
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 175/370 (47%), Gaps = 43/370 (11%)
Query: 34 LLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDG-HEIVSVTCGADHTTAYSESCMQ 92
+L +VC G G+ GQLG G ED L +LS + G + V ++ G H ++S
Sbjct: 40 VLGNVLVC--GNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSG-D 94
Query: 93 VYSWGWGDFGRLGHGNSSD------LFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQ 146
+YS+G D G LG S D LP KAL I+ GDSH + +G V
Sbjct: 95 IYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALC------ISAGDSHSACLLEDGRVF 148
Query: 147 SWG--RNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGR 204
+WG R+ +G +GL + P L EG +A+GA+H V + G+++ G
Sbjct: 149 AWGSFRDSHGNMGLTIDGNKRTPIDL--MEGTVCCSIASGADHLVILTTAGKVFTVGCAE 206
Query: 205 YGNLG-LGDRN----------DRLIPEKVATVDREKMVMV-ACGWRHTISVSSSGRLYSY 252
G LG L +R+ D L P ++ + + A + + S + +++
Sbjct: 207 QGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWAT 266
Query: 253 GWSKYGQLGH----GDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNK 308
G + + QL H +F L P + E L++ I I+GG HT+ +T+D K G +
Sbjct: 267 GLNNFKQLAHETKGKEFA--LTPIKTE-LKD--IRHIAGGQHHTVILTTDLKCSVVGRPE 321
Query: 309 FGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGE 368
+G++G+GD D + L +K+V + CG + AVT ++SWG G N QLG G+
Sbjct: 322 YGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGD 381
Query: 369 SSDRNSPKII 378
D P ++
Sbjct: 382 GDDELEPIVV 391
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 137/327 (41%), Gaps = 38/327 (11%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAED-RLSPTQLSALDGHEIVSVTCGADH 82
ISAG H++ L + S+G ++G LG +ED S L L G + ++ G H
Sbjct: 79 ISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALC-ISAGDSH 137
Query: 83 TTAYSESCMQVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHSLRVKQIACGDSHCLAV 139
+ E + WG F R HGN + D PI + IA G H + +
Sbjct: 138 SACLLEDG---RVFAWGSF-RDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVIL 193
Query: 140 TVEGEVQSWGRNQNGQLGLGT-----------TEDSLVPQKL-----QAFEGV-SIKMVA 182
T G+V + G + GQLG + D L P +L + FE + +
Sbjct: 194 TTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCT 253
Query: 183 AGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDR--LIPEKVATVDREKMVMVACGWRHT 240
E V ++ G + L + L P K D + +A G HT
Sbjct: 254 FMRESQTQV-----IWATGLNNFKQLAHETKGKEFALTPIKTELKD---IRHIAGGQHHT 305
Query: 241 ISVSSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTSDG 299
+ +++ + G +YG+LG GD KD + P ++ L E +S + G + AVT DG
Sbjct: 306 VILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVS-VGCGEVCSYAVTIDG 364
Query: 300 KLYGWGWNKFGQVGVGDNVDHCSPVQV 326
KLY WG Q+GVGD D P+ V
Sbjct: 365 KLYSWGSGVNNQLGVGDGDDELEPIVV 391
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 117/270 (43%), Gaps = 30/270 (11%)
Query: 22 LLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGAD 81
L ISAG SHS LL V +WG D G D T + ++G S+ GAD
Sbjct: 129 LCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGAD 188
Query: 82 HTTAYSESCMQVYSWG---WGDFGRL--------GHGNSSDLFTPLPIKALHSLRVKQIA 130
H + + +V++ G G GRL G DL P L R K
Sbjct: 189 HLVILT-TAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPT---QLIITRAKPFE 244
Query: 131 C--GDSHCLAVTVEGEVQ---SWGRNQNGQLGLGT--TEDSLVPQKLQAFEGVSIKMVAA 183
++C + E + Q + G N QL T E +L P K + + I+ +A
Sbjct: 245 AIWATNYCTFMR-ESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKD---IRHIAG 300
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDR--EKMVMVACGWRHTI 241
G H+V + D + G YG LGLGD D + EK V + EK+V V CG +
Sbjct: 301 GQHHTVILTTDLKCSVVGRPEYGRLGLGDVKD--VVEKPTIVKKLTEKIVSVGCGEVCSY 358
Query: 242 SVSSSGRLYSYGWSKYGQLGHGDFKDHLVP 271
+V+ G+LYS+G QLG GD D L P
Sbjct: 359 AVTIDGKLYSWGSGVNNQLGVGDGDDELEP 388
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 140 TVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKM-VAAGAEHSVAVAEDGELY 198
TV G V G GQLGLG ED L ++L G+ + ++AG H++ + + G++Y
Sbjct: 39 TVLGNVLVCGNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIY 96
Query: 199 GWGWGRYGNLGLGDRNDRLIPEKVATVDRE-KMVMVACGWRHTISVSSSGRLYSYGWSK- 256
+G G LG D ++ K +D K + ++ G H+ + GR++++G +
Sbjct: 97 SFGCNDEGALGR-DTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRD 155
Query: 257 -YGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 313
+G +G + P L + + I+ G H + +T+ GK++ G + GQ+G
Sbjct: 156 SHGNMGLTIDGNKRTPIDL--MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLG 211
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 141/283 (49%), Gaps = 20/283 (7%)
Query: 126 VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA 185
+K +ACGD +T G + ++G NG LG G D P ++A G + VA GA
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGA 458
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSS 245
H +A++ DGEL+ WG G G LGLG R P++V ++ V CG ++ ++S
Sbjct: 459 SHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTS 518
Query: 246 SGRLYSYGWSKYGQLG--HGDFKDHLVPCQL--EAL-----------RESFISQISGGWR 290
GR+ + G +++ +LG H + VP Q EAL +E + + G
Sbjct: 519 PGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLC-VDLGTA 577
Query: 291 HTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTER 350
H+ A+T+ G Y +G N+ GQ+G +P +V+ K+V ++CG T+AV
Sbjct: 578 HSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAE 637
Query: 351 QNVFSWGRGTNGQLGHGESSDRNSPKIIEPLSLDGSKGQNIAS 393
V+SWG+GT G+LG D P+ P+ LD + + S
Sbjct: 638 GEVYSWGKGTRGRLGR-RDEDAGLPR---PVQLDETHPYMVTS 676
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 16/291 (5%)
Query: 70 GHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQI 129
G I V CG T ++ + + ++G G G LGHGN +D+ P ++AL + Q+
Sbjct: 396 GVTIKHVACGDLFTACLTDRGI-IMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQV 454
Query: 130 ACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSV 189
ACG SH LA++ +GE+ +WGR G+LGLGT E PQ++ G + V G + S+
Sbjct: 455 ACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSM 514
Query: 190 AVAEDGELYGWGWGRYGNLGLG--------------DRNDRLIPEKVATVDREKMVMVAC 235
+ G + G R+ LGL + P A +D+E ++ V
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDL 574
Query: 236 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV 295
G H+ ++++SG Y++G +++GQLG + PC+++ L + ++ G T+AV
Sbjct: 575 GTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAV 634
Query: 296 TSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPLDQKVVQISCGWRHTL 345
++G++Y WG G++G D + PVQ+ V +SC +TL
Sbjct: 635 GAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSCCHGNTL 685
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 135/279 (48%), Gaps = 18/279 (6%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
++ G + L I+ ++G G +G LGHG+ D PT + AL G+E+V V CGA H
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHV 461
Query: 84 TAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEG 143
A S ++++WG GD GRLG G P + +++ CG + +T G
Sbjct: 462 LALSTD-GELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPG 520
Query: 144 EVQSWGRNQNGQLGLG--TTEDSLVPQKLQAFEGVS-------------IKMVAAGAEHS 188
V + G N+ +LGL + ++ VP + Q E +S + V G HS
Sbjct: 521 RVLACGSNRFNKLGLDHLSLDEEPVPYQ-QVEEALSFTPLGSAPLDQEPLLCVDLGTAHS 579
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGR 248
A+ G+ Y +G ++G LG R P +V ++ KMVMVACG T++V + G
Sbjct: 580 AAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGE 639
Query: 249 LYSYGWSKYGQLGHGDFKDHLV-PCQLEALRESFISQIS 286
+YS+G G+LG D L P QL+ ++ +S
Sbjct: 640 VYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVS 678
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 148/325 (45%), Gaps = 44/325 (13%)
Query: 93 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQ 152
VY+WG G L +PL + L++ V Q+A G + VT G + W
Sbjct: 320 VYAWGGG------------LSSPLRLPMLNT-EVVQVAAGRTQKAGVTRSGRLILWEAPP 366
Query: 153 ----NGQLGLGTTE---DSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRY 205
G L G E V + L+ GV+IK VA G + + + G + +G G
Sbjct: 367 LGAGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN 426
Query: 206 GNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDF 265
G LG G+ D P V + +MV VACG H +++S+ G L+++G G+LG G
Sbjct: 427 GCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTR 486
Query: 266 KDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCS--- 322
+ H P Q+ ++ G +M +TS G++ G N+F ++G +DH S
Sbjct: 487 ESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLG----LDHLSLDE 542
Query: 323 -PV---QVK----------FPLDQK-VVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 367
PV QV+ PLDQ+ ++ + G H+ A+T + +++G +GQLG
Sbjct: 543 EPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTS 602
Query: 368 ESSDRNSPKIIEPLSLDGSKGQNIA 392
+P ++ L+G K +A
Sbjct: 603 SRRVSRAPCRVQ--GLEGIKMVMVA 625
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 9 EAASTT---AAPF--RPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPT 63
EA S T +AP P+L + G +HS A+ + ++G + GQLG +P
Sbjct: 552 EALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPC 611
Query: 64 QLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNS-SDLFTPLPIKALH 122
++ L+G ++V V CG T A +VYSWG G GRLG + + L P+ + H
Sbjct: 612 RVQGLEGIKMVMVACGDAFTVAVGAE-GEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETH 670
Query: 123 SLRVKQIAC 131
V ++C
Sbjct: 671 PYMVTSVSC 679
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 89/182 (48%), Gaps = 44/182 (24%)
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAA 183
LR +Q+ G H L + G+V SWG ++GQLG GT E L P+ L+A +G+++ VAA
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAA 217
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKM------------- 230
G HSV V+E G++Y WGW G L L RN + E TV RE
Sbjct: 218 GGWHSVCVSETGDIYIWGWNESGQLALPTRN---LAEDGETVAREATGLNEDGSQVKRTG 274
Query: 231 ----------------------------VMVACGWRHTISVSSSGRLYSYGWSKYGQLGH 262
V V+CG RHT V+ +G LY++GW KYGQLGH
Sbjct: 275 RVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGH 334
Query: 263 GD 264
D
Sbjct: 335 ED 336
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 38/182 (20%)
Query: 236 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV 295
G H + + ++G+++S+G ++GQLGHG + L P LEAL+ +++++ G H++ V
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCV 225
Query: 296 TSDGKLYGWGWNKFGQVGV-----------------GDNVD------------------- 319
+ G +Y WGWN+ GQ+ + G N D
Sbjct: 226 SETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFI 285
Query: 320 --HCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKI 377
P + PL V++SCG RHT VT +++WG G GQLGH +++ + P+
Sbjct: 286 AVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRR 345
Query: 378 IE 379
+E
Sbjct: 346 VE 347
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 88/219 (40%), Gaps = 44/219 (20%)
Query: 17 PFRPVLL---ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEI 73
P P L + GA H++ L + V SWG G GQLGHG E L P L AL G +
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTM 212
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLG---------------------------- 105
V G H+ SE+ +Y WGW + G+L
Sbjct: 213 AEVAAGGWHSVCVSETG-DIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVK 271
Query: 106 ------HGNSSDLFTPLPIKALHSLRV----KQIACGDSHCLAVTVEGEVQSWGRNQNGQ 155
G + P AL L + +++CG H VT GE+ +WG + GQ
Sbjct: 272 RTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQ 331
Query: 156 LGLGTTEDSLVPQKLQAF--EGVSIKMVAAGAEHSVAVA 192
LG T P++++ F + + +K V G ++ A
Sbjct: 332 LGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 37 GNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSW 96
G+ V GR EDG A P L G + V V+CG+ HT + + ++Y+W
Sbjct: 267 GSQVKRTGRVEDGAPAPFIAVQPF-PALLDLPLGSDAVKVSCGSRHTAVVTRTG-ELYTW 324
Query: 97 GWGDFGRLGHGNSSDLFTPLPIKAL--HSLRVKQIACGDSHCLAVTVE 142
GWG +G+LGH +++ L P ++ L+VK + CG + VE
Sbjct: 325 GWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 372
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 323 PVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 381
P + + Q+ G H L + VFSWG G +GQLGHG P+++E L
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEAL 207
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 284 QISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRH 343
Q+ G H + + + G+++ WG + GQ+G G P ++ + +++ G H
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWH 221
Query: 344 TLAVTERQNVFSWGRGTNGQL 364
++ V+E +++ WG +GQL
Sbjct: 222 SVCVSETGDIYIWGWNESGQL 242
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 150/344 (43%), Gaps = 28/344 (8%)
Query: 59 RLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG--DFGRLGHGNSSDLFT-- 114
R+ P H+I S CG T S++ WG G +LG S T
Sbjct: 92 RIQPVPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRG 151
Query: 115 ----------PLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDS 164
PLP+ +V Q++CG +H L +T V S G N +GQ G ED
Sbjct: 152 YEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDE 211
Query: 165 LVPQ-----KLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIP 219
+ + ++Q F+G +++V G +HS+ + + GE+Y GWG G GLG N P
Sbjct: 212 VYSESHKVHRMQDFDGQVVQVV-CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTP 270
Query: 220 EKV-ATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH-GDFKDHLVPCQLEAL 277
K+ + +V VA +++S+ G ++ +G S+Y QL D VP L
Sbjct: 271 SKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFS 330
Query: 278 RESFISQISGGWRHTMAVTSDGKLYGWGWNKFG------QVGVGDNVDHCSPVQVKFPLD 331
+ Q++ G + ++G ++ WG+ G + + + + +F +
Sbjct: 331 GVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPE 390
Query: 332 QKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSP 375
+V QI CG H A+T + +F WG+ G LG G D+ P
Sbjct: 391 VQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFP 434
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 163/369 (44%), Gaps = 43/369 (11%)
Query: 17 PFRPVL---LISAGASHSVALLSG---NIVCSWGRG--EDGQLG-HGDAEDRLS------ 61
P+R L + SA + LLS ++ WG G +D QLG H +D+
Sbjct: 97 PYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVL 156
Query: 62 -----PTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPL 116
P L +++ V+CG H+ ++ V+S G G+ G D
Sbjct: 157 EPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDR-EGVFSMGNNSHGQCGRKVVEDEVYSE 215
Query: 117 PIKALHSLR-----VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQ 171
K +H ++ V Q+ CG H L +T +GEV S G +GQ GLG + P KL
Sbjct: 216 SHK-VHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLG 274
Query: 172 A-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG-LGDRNDRLIPEKVATVDREK 229
GV++ VA + +A++ DG ++GWG Y L + D +P + K
Sbjct: 275 GDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGK 334
Query: 230 MVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGD-----FKDHLVPCQLEALRESF--- 281
+ VACG +++ G ++ +G YG LG G ++P L L E
Sbjct: 335 VKQVACGGTGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPEV 391
Query: 282 -ISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCG 340
+SQI G H A+T+ G+L+ WG N G +G+G D P +V P + V ++CG
Sbjct: 392 QVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEP--VDVACG 449
Query: 341 WRHTLAVTE 349
H + + +
Sbjct: 450 VDHMVTLAK 458
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 34/156 (21%)
Query: 248 RLYSYGWSKYGQLGHGDF-----------------KDHLVPCQLEALRESFISQISGGWR 290
R++ +G+S G LG F + VP +LE + IS + G+
Sbjct: 57 RVFVWGFSFSGALGVPSFVVPSSGPGPRAGLRPRRRIQPVPYRLEL--DHKISSAACGYG 114
Query: 291 HTM--AVTSD-GKLYGWGWNKFGQVGVGDNVDH--------CSPVQVKFPLDQ----KVV 335
T+ + T D K++G G NK Q+G + P V PLD+ KV+
Sbjct: 115 FTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVL 174
Query: 336 QISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSD 371
Q+SCG H+L +T+R+ VFS G ++GQ G D
Sbjct: 175 QVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVED 210
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 83
I G SH AL + + WG+ G LG G ED+ P +++ + G E V V CG DH
Sbjct: 396 IRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVT-MPG-EPVDVACGVDHM 453
Query: 84 TAYSES 89
++S
Sbjct: 454 VTLAKS 459
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 91/193 (47%), Gaps = 44/193 (22%)
Query: 124 LRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAA 183
LR +Q+ G H L + G+V SWG ++GQLG GT E L P+ L+A +G+ + VAA
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAA 217
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKM------------- 230
G HSV V+E G++Y WGW G L L RN + E TV RE
Sbjct: 218 GGWHSVCVSETGDIYIWGWNESGQLALPTRN---LAEDGETVAREATELNEDGSQVKRTG 274
Query: 231 ----------------------------VMVACGWRHTISVSSSGRLYSYGWSKYGQLGH 262
V +CG RHT V+ +G LY++GW KYGQLGH
Sbjct: 275 GAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 334
Query: 263 GDFKDHLVPCQLE 275
D P ++E
Sbjct: 335 EDTTSLDRPRRVE 347
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 38/182 (20%)
Query: 236 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAV 295
G H + + ++G+++S+G ++GQLGHG + L P LEAL+ +++++ G H++ V
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 296 TSDGKLYGWGWNKFGQVGV--------GDNVDHCS------------------------- 322
+ G +Y WGWN+ GQ+ + G+ V +
Sbjct: 226 SETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFI 285
Query: 323 -----PVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKI 377
P + P+ V+ SCG RHT VT +++WG G GQLGH +++ + P+
Sbjct: 286 AVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRR 345
Query: 378 IE 379
+E
Sbjct: 346 VE 347
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 110/255 (43%), Gaps = 45/255 (17%)
Query: 141 VEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVA----AGAEHSVAVAEDGE 196
EGE G Q G+L L + V + + ++ ++ A GAEH++ + G+
Sbjct: 119 AEGEDDPAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQ 178
Query: 197 LYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSK 256
++ WG GR+G LG G L P + + M VA G H++ VS +G +Y +GW++
Sbjct: 179 VFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNE 238
Query: 257 YGQLG-----------------------------HGDFKD---------HLVPCQLEALR 278
GQL G +D P L+
Sbjct: 239 SGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPM 298
Query: 279 ESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQ--KVVQ 336
S + S G RHT VT G+LY WGW K+GQ+G D P +V++ +D+ +V
Sbjct: 299 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKA 358
Query: 337 ISCG-WRHTLAVTER 350
++CG W + E+
Sbjct: 359 VTCGPWNTYVYAVEK 373
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 92/214 (42%), Gaps = 42/214 (19%)
Query: 76 VTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACGDSH 135
+ GA+H ++ QV+SWG G G+LGHG P ++AL L + ++A G H
Sbjct: 163 LELGAEHALLL-DAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWH 221
Query: 136 CLAVTVEGEVQSWGRNQNGQLGLGT-----------------TED-SLVPQKLQAFEGVS 177
+ V+ G++ WG N++GQL L T ED S V + A +G
Sbjct: 222 SVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAP 281
Query: 178 IKMVAA--------------------GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRL 217
+A G+ H+ V GELY WGWG+YG LG D
Sbjct: 282 APFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLD 341
Query: 218 IPEKVAT-VDREKMV-MVACG-WRHTISVSSSGR 248
P +V VD++ V V CG W + G+
Sbjct: 342 RPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGK 375
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 84/211 (39%), Gaps = 44/211 (20%)
Query: 17 PFRPVLL---ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEI 73
P P L + GA H++ L + V SWG G GQLGHG E L P L AL G +
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVM 212
Query: 74 VSVTCGADHTTAYSESCMQVYSWGWGDFGRLG---------------------------- 105
V G H+ SE+ +Y WGW + G+L
Sbjct: 213 AEVAAGGWHSVCVSETG-DIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVK 271
Query: 106 ------HGNSSDLFTPLPIKALHSLRVK----QIACGDSHCLAVTVEGEVQSWGRNQNGQ 155
G + P AL L + + +CG H VT GE+ +WG + GQ
Sbjct: 272 RTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQ 331
Query: 156 LGLGTTEDSLVPQKLQAF--EGVSIKMVAAG 184
LG T P++++ F + + +K V G
Sbjct: 332 LGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 362
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 62 PTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKAL 121
P L G + V +CG+ HT + + ++Y+WGWG +G+LGH +++ L P ++
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHEDTTSLDRPRRVEYF 349
Query: 122 --HSLRVKQIACGDSHCLAVTVE 142
L+VK + CG + VE
Sbjct: 350 VDKQLQVKAVTCGPWNTYVYAVE 372
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 322 SPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEPL 381
+P + + Q+ G H L + VFSWG G +GQLGHG P+++E L
Sbjct: 148 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEAL 207
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 284 QISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQISCGWRH 343
Q+ G H + + + G+++ WG + GQ+G G P ++ + +++ G H
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWH 221
Query: 344 TLAVTERQNVFSWGRGTNGQL 364
++ V+E +++ WG +GQL
Sbjct: 222 SVCVSETGDIYIWGWNESGQL 242
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 29/280 (10%)
Query: 21 VLLISAGASHSVALLSGNIVCSWG--RGEDGQLGHGDAEDRL--SPTQLSALDGHEIVSV 76
V+ ++A + S AL S V +WG R +G LG + ++ +P ++ + IV +
Sbjct: 167 VVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQL 226
Query: 77 TCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDL----FTPLPIKALHSLRVKQIACG 132
G DH E M V++WG G +LG P P H VK IA G
Sbjct: 227 APGKDHILFLDEEGM-VFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRH---VKYIASG 282
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLGT-TED-SLV--PQKLQAFEGVSIKMVAAGAEHS 188
++HC A+T + ++ SWG NQ GQ G+ ED +LV P++L + V I+ +AAG HS
Sbjct: 283 ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHS 342
Query: 189 VAVAEDGELYGWGWGRYGNLGLGDRN------------DRLIPEKVATVDREKMVMVACG 236
+ +++DG+LY G +G+ N R +P + K VA G
Sbjct: 343 LILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAG 402
Query: 237 WRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHL-VPCQLE 275
H+++V+ +G YS+G+ + +G G F+D VP +++
Sbjct: 403 SHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIK 442
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 148/351 (42%), Gaps = 48/351 (13%)
Query: 53 HGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHG---NS 109
+GDA ++S I++ H S + ++ WG G LG G +
Sbjct: 9 NGDASGAHRAKKMSKTHASHIINAQEDYKHMY-LSVQPLDIFCWGTGSMCELGLGPLAKN 67
Query: 110 SDLFTPL--PIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTT------ 161
++ P P ++ A G H LA+ E V SWG N G LG T+
Sbjct: 68 KEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQL 127
Query: 162 -----------------EDSLVPQKL--QAF----EGVSIKMVAAGAEHSVAVAEDGELY 198
E P K+ ++F EG + +AA S A+ +GE+Y
Sbjct: 128 KDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVY 187
Query: 199 GWGWGRYGNLGLGDRNDRL----IPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGW 254
WG R LG D++ P KV T + +V +A G H + + G ++++G
Sbjct: 188 AWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGN 247
Query: 255 SKYGQLGHG---DFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQ 311
+ QLG F+ + + LR + I+ G H A+T D KL WG N+FGQ
Sbjct: 248 GQQNQLGRKVMERFRLKTLDPRPFGLRH--VKYIASGENHCFALTKDNKLVSWGLNQFGQ 305
Query: 312 VGVGDNVDH----CSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGR 358
GV ++V+ P ++ P + + I+ G H+L +++ +++S GR
Sbjct: 306 CGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGR 356
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 166/390 (42%), Gaps = 63/390 (16%)
Query: 17 PFRP-----VLLISAGASHSVALLSGNIVCSWGRGEDGQLGH--GDAEDRL--------- 60
PF P ++ + G H++AL + V SWG + G LG +A+++L
Sbjct: 77 PFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSS 136
Query: 61 ------------SPTQLS------ALDGHEIVSVTCGADHTTAYSESCMQVYSWGWG--D 100
+P ++ +GH++V + D+ + S +VY+WG +
Sbjct: 137 DDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLA-ATDNMSCALFSNGEVYAWGTFRCN 195
Query: 101 FGRLGHGNSSDLF--TPLPIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGL 158
G LG TP + + Q+A G H L + EG V +WG Q QLG
Sbjct: 196 EGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR 255
Query: 159 GTTED-SLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLG-DRNDR 216
E L + F +K +A+G H A+ +D +L WG ++G G+ D D
Sbjct: 256 KVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDG 315
Query: 217 LI---PEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLG------------ 261
+ P+++A D + +A G H++ +S G LYS G ++G
Sbjct: 316 ALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYK 375
Query: 262 --HGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD 319
HG + +P +L + + ++ G H++AV +G Y WG+ + VG+G D
Sbjct: 376 DVHGKARAVPLPTKLNNVPK--FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFED 433
Query: 320 HCS-PVQVKFPL--DQKVVQISCGWRHTLA 346
P ++K D ++ + CG + +++
Sbjct: 434 DTEVPTRIKNTATQDHNIILVGCGGQFSVS 463
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 106/267 (39%), Gaps = 57/267 (21%)
Query: 179 KMVAAGAEHSVAVAEDG----------ELYGWGWGRYGNLGLGD-------RNDRLIPEK 221
KM A H + ED +++ WG G LGLG + RL P
Sbjct: 20 KMSKTHASHIINAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNP-- 77
Query: 222 VATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH--GDFKDHL---------- 269
D K++ A G HT+++ ++S+G + G LG + K+ L
Sbjct: 78 FLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSD 137
Query: 270 -----------VPCQLEALRESF--------ISQISGGWRHTMAVTSDGKLYGWGWNKFG 310
P ++ RESF + Q++ + A+ S+G++Y WG +
Sbjct: 138 DEDGDLNELESTPAKIP--RESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCN 195
Query: 311 QVGVGDNVDHC----SPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGH 366
+ +G D +P +V +VQ++ G H L + E VF+WG G QLG
Sbjct: 196 EGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR 255
Query: 367 GESSDRNSPKIIEPLSLDGSKGQNIAS 393
+ +R K ++P + IAS
Sbjct: 256 -KVMERFRLKTLDPRPFGLRHVKYIAS 281
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 148/335 (44%), Gaps = 34/335 (10%)
Query: 71 HEIVSVTCGADHTTAYSESCMQVYSWGWG--DFGRLG-HGNSSD-------LFTP----L 116
+I S CG T S++ WG G +LG H + D + P L
Sbjct: 107 QKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 117 PIKALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQ-----KLQ 171
P+ RV Q++CG +H L +T V S G N GQ G E+ + + ++Q
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 172 AFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVA-TVDREKM 230
F+G + VA G +HS+ + + GE+Y GWG G GLG N P K+ + +
Sbjct: 227 DFDG-QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 231 VMVACGWRHTISVSSSGRLYSYGWSKYGQLGH-GDFKDHLVPCQLEALRESFISQISGGW 289
+ VA ++VS+ G L+ +G S+Y QL D VP L + Q + G
Sbjct: 286 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGG 345
Query: 290 RHTMAVTSDGKLYGWGWNKFGQVGVGDN-VDHCSPVQV--------KFPLDQKVVQISCG 340
+ +G ++ WG +G +G G N V+ P + +F + +V +I CG
Sbjct: 346 TGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCG 402
Query: 341 WRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSP 375
H A+T + +F WG+ G LG G D+ P
Sbjct: 403 LSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFP 437
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 171/371 (46%), Gaps = 45/371 (12%)
Query: 16 APFRPVL---LISAGASHSVALLS---GNIVCSWGRG--EDGQLG-HGDAEDR------- 59
P+R L + SA + LLS ++ WG G +D QLG H +D+
Sbjct: 99 VPYRLELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 158
Query: 60 LSPTQLS-ALDGHE---IVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGN-SSDLFT 114
L P+ +S LD + ++ V+CG H+ ++ V+S G +G+ G +++++
Sbjct: 159 LEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDR-EGVFSMGNNSYGQCGRKVVENEIYS 217
Query: 115 PLPIKALHSLR-----VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQK 169
+H ++ V Q+ACG H L +T +GEV S G +GQ GLG + P K
Sbjct: 218 E--SHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTK 275
Query: 170 LQA-FEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLG-LGDRNDRLIPEKVATVDR 227
L GV++ VA + +AV+ DG L+GWG Y L + D +P +
Sbjct: 276 LGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGV 335
Query: 228 EKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG-----DFKDHLVPCQLEALRESF- 281
K+ ACG ++ G ++ +G YG LG G ++P L L E
Sbjct: 336 GKVRQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFNP 392
Query: 282 ---ISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPLDQKVVQIS 338
+S+I G H A+T+ G+L+ WG N G +G+G D P +V P + V ++
Sbjct: 393 EIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEP--VDVA 450
Query: 339 CGWRHTLAVTE 349
CG H + + +
Sbjct: 451 CGVDHMVTLAK 461
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 109/243 (44%), Gaps = 29/243 (11%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVTCG 79
V+ ++ G HS+ L V S G G DGQ G G SPT+L L G ++ V
Sbjct: 232 VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQV--- 288
Query: 80 ADHTTAYSESCMQVYS----WGWGDFGRLGHGNSSDLFTPLPIKALHSL---RVKQIACG 132
Y + C+ V + +GWG+ L + +D + LH +V+Q ACG
Sbjct: 289 ----ATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACG 344
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLG-TTEDSLVPQK-------LQAFEG-VSIKMVAA 183
+ C + EG V WG G LG G +S VP+ L F + + +
Sbjct: 345 GTGCAVLNGEGHVFVWGY---GILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRC 401
Query: 184 GAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISV 243
G H A+ GEL+ WG G LG+G D+ P +V T+ E V VACG H +++
Sbjct: 402 GLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEP-VDVACGVDHMVTL 459
Query: 244 SSS 246
+ S
Sbjct: 460 AKS 462
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 17/112 (15%)
Query: 270 VPCQLEALRESFISQISGGWRHTM--AVTSD-GKLYGWGWNKFGQVGVGDNVDH------ 320
VP +LE ++ IS + G+ T+ + T+D K++G G NK Q+G +
Sbjct: 99 VPYRLELDQK--ISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYE 156
Query: 321 --CSPVQVKFPLDQ----KVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGH 366
P V PLD+ +V+Q+SCG H+L +T+R+ VFS G + GQ G
Sbjct: 157 YVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGR 208
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 36/187 (19%)
Query: 229 KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGG 288
++ + G H + + ++G+++S+G ++GQLGHG + L P LEAL+ +++++ G
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 289 WRHTMAVTSDGKLYGWGWNKFGQVGVGD----------------NVDHCS---------- 322
H++ ++ G +Y WGWN+ GQ+ + N D
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGA 281
Query: 323 ----------PVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDR 372
P + PL V SCG RHT VT +++WG G GQLGH +S+
Sbjct: 282 PAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSL 341
Query: 373 NSPKIIE 379
+ P +E
Sbjct: 342 DRPCCVE 348
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 39/214 (18%)
Query: 176 VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVAC 235
+ ++ + GAEH + + G+++ WG GR+G LG G L P + + +M VA
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAA 220
Query: 236 GWRHTISVSSSGRLYSYGWSKYGQLG--------------------HGDFKDHL------ 269
G H++ +S +G +Y +GW++ GQL K+ L
Sbjct: 221 GGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAG 280
Query: 270 ----------VPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD 319
P L+ S S G RHT VT G+LY WGW K+GQ+G D+
Sbjct: 281 APAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTS 340
Query: 320 HCSPVQVKFPLDQK--VVQISCG-WRHTLAVTER 350
P V++ ++++ V ++CG W + ER
Sbjct: 341 LDRPCCVEYFVERQLEVRAVTCGPWNTYVYAMER 374
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 86/202 (42%), Gaps = 39/202 (19%)
Query: 73 IVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIACG 132
+ + GA+H + QV+SWG G G+LGHG P ++AL LR+ ++A G
Sbjct: 163 VRQLELGAEHVLLLC-AAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 133 DSHCLAVTVEGEVQSWGRNQNGQLGLGT----------------TEDSL----------- 165
H + ++ G++ WG N++GQL L T ED L
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGA 281
Query: 166 ---------VPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNLGLGDRNDR 216
P L G M + G+ H+ V GELY WGWG+YG LG D
Sbjct: 282 PAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSL 341
Query: 217 LIPEKVAT-VDREKMV-MVACG 236
P V V+R+ V V CG
Sbjct: 342 DRPCCVEYFVERQLEVRAVTCG 363
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 69/178 (38%), Gaps = 37/178 (20%)
Query: 16 APFRPVLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVS 75
AP V + GA H + L + V SWG G GQLGHG E L P L AL G +
Sbjct: 158 APELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 76 VTCGADHTTAYSESCMQVYSWGWGDFGRLG------------------------------ 105
V G H+ SE+ +Y WGW + G+L
Sbjct: 218 VAAGGWHSVCLSET-GDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAV 276
Query: 106 --HGNSSDLFTPLPIKALHSLRVKQIA----CGDSHCLAVTVEGEVQSWGRNQNGQLG 157
G + P AL L + A CG H VT GE+ +WG + GQLG
Sbjct: 277 ADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLG 334
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 39/147 (26%)
Query: 24 ISAGASHSVALLSGNIVCSWGRGEDGQL------GHGDAEDRLSPTQL------------ 65
++AG HSV L + WG E GQL G + +R T+L
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVA 277
Query: 66 ---------------SALD---GHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHG 107
+ LD G + V +CG+ HT + + ++Y+WGWG +G+LGH
Sbjct: 278 DAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRT-GELYTWGWGKYGQLGHK 336
Query: 108 NSSDLFTPLPIKAL--HSLRVKQIACG 132
+S+ L P ++ L V+ + CG
Sbjct: 337 DSTSLDRPCCVEYFVERQLEVRAVTCG 363
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 321 CSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNSPKIIEP 380
C P+ + +V Q+ G H L + VFSWG G +GQLGHG P+++E
Sbjct: 154 CQPLAPEL----RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEA 209
Query: 381 L 381
L
Sbjct: 210 L 210
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 1 MAEASAASEAASTTAAPFRPVL---------LISAGASHSVALLSGNIVCSWGRGEDGQL 51
+A A A + A PF +L + S G+ H+ + + +WG G+ GQL
Sbjct: 274 LAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQL 333
Query: 52 GHGDAE--DRLSPTQLSALDGHEIVSVTCGADHTTAYS 87
GH D+ DR + E+ +VTCG +T Y+
Sbjct: 334 GHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYA 371
>sp|Q54X24|RCCDA_DICDI RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium
discoideum GN=DDB_G0279253 PE=4 SV=1
Length = 512
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 37/204 (18%)
Query: 226 DREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGH----------------GDFKDHL 269
++ ++V V+CG RH+I++SS +Y +G +K+GQL + D D +
Sbjct: 229 NKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDIADPM 288
Query: 270 V---PCQLEALRESFISQISGGWRHTMAVTSDGK-LYGWGWNKFGQVGVGDNVDHCSPVQ 325
V P + E I QIS G++HT+ + + K + +G NKFGQ+G G+ +D +P
Sbjct: 289 VQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPCV 348
Query: 326 V---KFPL---------DQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHG-----E 368
+ F L D K+ +I CGW ++ +T + ++ GRG G LG +
Sbjct: 349 IDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICGRGEYGILGDNRDLSLD 408
Query: 369 SSDRNSPKIIEPLSLDGSKGQNIA 392
+S+ N K++ S + +K +N +
Sbjct: 409 NSNSNQFKLLNSESFNENKIKNFS 432
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 39/209 (18%)
Query: 176 VSIKMVAAGAEHSVAVAEDGELYGWGWGRYGNL-GLGDRN---------------DRLI- 218
+ I V+ G HS+A++ + ++YGWG ++G L L D N D ++
Sbjct: 231 IRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDIADPMVQ 290
Query: 219 --PEKVATVDREKMVMVACGWRHTISVSSSGR-LYSYGWSKYGQLGHGDFKDHLVPCQLE 275
P+ + + K++ ++CG++HT+ + + + + S+G +K+GQLG+G+F D PC ++
Sbjct: 291 DSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPCVID 350
Query: 276 ------------ALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDHCSP 323
+L + I +I GW ++ +T+ KLY G ++G +G ++ +
Sbjct: 351 ISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICGRGEYGILGDNRDLSLDNS 410
Query: 324 VQVKFPL-------DQKVVQISCGWRHTL 345
+F L + K+ S G H L
Sbjct: 411 NSNQFKLLNSESFNENKIKNFSIGSEHIL 439
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 55/271 (20%)
Query: 21 VLLISAGASHSVALLSGNIVCSWGRGEDGQLGH----------------GDAEDRL---S 61
++ +S G HS+AL S N V WG + GQL + D D + S
Sbjct: 233 IVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDIADPMVQDS 292
Query: 62 PTQLSALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPI--- 118
P ++ + +I+ ++CG HT + V S+G FG+LG+GN D P I
Sbjct: 293 PKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPCVIDIS 352
Query: 119 ---------KALHSLRVKQIACGDSHCLAVTVEGEVQSWGRNQNGQLG----LGTTEDSL 165
K+L+ +++K+I CG S+ +T + ++ GR + G LG L +
Sbjct: 353 SFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICGRGEYGILGDNRDLSLDNSNS 412
Query: 166 VPQKL---QAFEGVSIKMVAAGAEHSV----------AVAEDGELYGWGWGRYGNLGL-- 210
KL ++F IK + G+EH + + +Y +GW + LGL
Sbjct: 413 NQFKLLNSESFNENKIKNFSIGSEHILIQVYSNDNNNNNNNNNNIYSFGWNEHYQLGLCE 472
Query: 211 -----GDRNDRLIPEKVATVDREKMVMVACG 236
D +++ P+ + ++ +V G
Sbjct: 473 PIIIGKDGDNKSFPQLLPSIKGNDKSLVKAG 503
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 33/152 (21%)
Query: 91 MQVYSWGWGDFGRLGHGNSSD------LFTPLPIKALHSLRVKQIACGDSHCLAVTVEGE 144
M++YSWG G+ G+LG GN+ D L P K + + V I G H + + G+
Sbjct: 1 MKIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEI-VNDIVGGGCHSMMIIDNGD 59
Query: 145 VQSWGRNQNGQLGLGTTEDS------------------------LVPQKLQAFE--GVSI 178
+ ++G N +GQLG+ + E +P L F+ + I
Sbjct: 60 LYTFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKI 119
Query: 179 KMVAAGAEHSVAVAEDGELYGWGWGRYGNLGL 210
K + G HS+A +G +Y WG +G LG+
Sbjct: 120 KNCSGGWAHSLACDNNGNIYSWGSNSHGQLGI 151
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 31/158 (19%)
Query: 248 RLYSYGWSKYGQLGHGDFKDHLVPCQLEALRE-----SFISQISGGWRHTMAVTSDGKLY 302
++YS+G GQLG G+ D + L + ++ I GG H+M + +G LY
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLY 61
Query: 303 GWGWNKFGQVGVGDN-------------------------VDHCSPVQVKFPLDQ-KVVQ 336
+G N GQ+G+ N + F ++ K+
Sbjct: 62 TFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKIKN 121
Query: 337 ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSDRNS 374
S GW H+LA N++SWG ++GQLG + NS
Sbjct: 122 CSGGWAHSLACDNNGNIYSWGSNSHGQLGIDTTCSLNS 159
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 35/151 (23%)
Query: 144 EVQSWGRNQNGQLGLGTTEDS-------LVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGE 196
++ SWG GQLG+G T+DS L P + +E V+ + G HS+ + ++G+
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVN--DIVGGGCHSMMIIDNGD 59
Query: 197 LYGWGWGRYGNLGLGDRND------------------------RLIPEKVATVDREKMVM 232
LY +G G LG+ + IP + + +
Sbjct: 60 LYTFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKI 119
Query: 233 VAC--GWRHTISVSSSGRLYSYGWSKYGQLG 261
C GW H+++ ++G +YS+G + +GQLG
Sbjct: 120 KNCSGGWAHSLACDNNGNIYSWGSNSHGQLG 150
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 30/152 (19%)
Query: 40 VCSWGRGEDGQLGHGDAEDRLS-PTQLSALDG---HEIVSVTCGADHTTAYSESCMQVYS 95
+ SWG G GQLG G+ +D +S PT + DG +EIV+ G + +Y+
Sbjct: 3 IYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLYT 62
Query: 96 WGWGDFGRLGHGNSSD--------------------------LFTPLPIKALHSLRVKQI 129
+G D G+LG ++ + T L ++S+++K
Sbjct: 63 FGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKIKNC 122
Query: 130 ACGDSHCLAVTVEGEVQSWGRNQNGQLGLGTT 161
+ G +H LA G + SWG N +GQLG+ TT
Sbjct: 123 SGGWAHSLACDNNGNIYSWGSNSHGQLGIDTT 154
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 317 NVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGH 366
N++ +++ F ++V +SCG RH++A++ +V+ WG GQL +
Sbjct: 216 NLNEPKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSN 265
>sp|Q54VW7|GACGG_DICDI Rho GTPase-activating protein gacGG OS=Dictyostelium discoideum
GN=gacGG PE=3 SV=1
Length = 1203
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 30/296 (10%)
Query: 79 GADHTTAYSESCMQVYSWGWGDFGRLGHGNS-SDLFTPLPIKALHSLRVKQIACGDSHCL 137
G +H+ A +E+ ++Y WG +L + + + P+ I+ + + RVK I+CG +
Sbjct: 42 GYNHSLALTETG-ELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSA 100
Query: 138 AVTVEGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVA----- 192
A+ G + WG G G +S P K+ +GV+ V+ G H VA
Sbjct: 101 AIMENGLLYVWGTLIEG----GKCTES--PTKVDLLKGVT--CVSIGINHCAVVADSPTT 152
Query: 193 -EDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYS 251
E +Y WG R G LG+ + P +V K + V CG T ++ ++
Sbjct: 153 PEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTL--GSKAISVCCGEEFTAAIVEGNEVFV 210
Query: 252 YGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQ 311
+G++K Q+ + D ++ ++ I ++S + A + G + WG N+ Q
Sbjct: 211 WGYNKSRQICSNN-SDEIISIPVKPFLGRDIVELSCTKNYIAARSGVGNVCVWGSNE--Q 267
Query: 312 V-GVGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGH 366
V +GD+ + FP K+ QIS H L ++E+ +FSWG + QL H
Sbjct: 268 VCRIGDDKF------INFP--NKIKQISASTSHILVLSEKGEIFSWGNSEDNQLSH 315
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 34/239 (14%)
Query: 142 EGEVQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGAEHSVAVAEDGELYGWG 201
+G + WG +G+ T + L+P +I + G HS+A+ E GELYGWG
Sbjct: 13 QGVLYCWGDKFSGK----PTFNPLIP---------NICFMDNGYNHSLALTETGELYGWG 59
Query: 202 WGRYGNLGLGDRNDRL-IPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQL 260
R+ L + P K+ + +++ ++CG + ++ +G LY +G G
Sbjct: 60 DNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVWGTLIEG-- 117
Query: 261 GHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDG-------KLYGWGWNKFGQVG 313
G + P +++ L+ ++ +S G H AV +D +Y WG N+ GQ+G
Sbjct: 118 --GKCTES--PTKVDLLKG--VTCVSIGINHC-AVVADSPTTPEKRSVYTWGTNRKGQLG 170
Query: 314 V-GDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESSD 371
V GD++ + +P +V L K + + CG T A+ E VF WG + Q+ S +
Sbjct: 171 VVGDSITN-APRRVT--LGSKAISVCCGEEFTAAIVEGNEVFVWGYNKSRQICSNNSDE 226
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 130/301 (43%), Gaps = 31/301 (10%)
Query: 14 TAAPFRP-VLLISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGH 71
T P P + + G +HS+AL + WG QL A + P ++ +
Sbjct: 28 TFNPLIPNICFMDNGYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQ 87
Query: 72 EIVSVTCGADHTTAYSESCMQVYSWGWGDFGRLGHGNSSDLFTPLPIKALHSLRVKQIAC 131
+ S++CG + + A E+ + +Y WG G G ++ +P + L V ++
Sbjct: 88 RVKSISCGGNFSAAIMENGL-LYVWGTLIEG----GKCTE--SPTKVDLLKG--VTCVSI 138
Query: 132 GDSHCLAV-----TVEGE-VQSWGRNQNGQLGLGTTEDSLVPQKLQAFEGVSIKMVAAGA 185
G +HC V T E V +WG N+ GQLG+ + P+++ G V G
Sbjct: 139 GINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTL--GSKAISVCCGE 196
Query: 186 EHSVAVAEDGELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSS 245
E + A+ E E++ WG+ + + + +D +I V +V ++C + + S
Sbjct: 197 EFTAAIVEGNEVFVWGYNKSRQIC-SNNSDEIISIPVKPFLGRDIVELSCTKNYIAARSG 255
Query: 246 SGRLYSYGWS-KYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMAVTSDGKLYGW 304
G + +G + + ++G F + P + I QIS H + ++ G+++ W
Sbjct: 256 VGNVCVWGSNEQVCRIGDDKFINF--PNK--------IKQISASTSHILVLSEKGEIFSW 305
Query: 305 G 305
G
Sbjct: 306 G 306
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 12 STTAAPFRPVL-----LISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS 66
S T AP R L + G + A++ GN V WG + Q+ ++++ +S +
Sbjct: 175 SITNAPRRVTLGSKAISVCCGEEFTAAIVEGNEVFVWGYNKSRQICSNNSDEIIS-IPVK 233
Query: 67 ALDGHEIVSVTCGADHTTAYSESCMQVYSWGWGD-FGRLGHGNSSDLFTPLPIKALHSLR 125
G +IV ++C ++ A S V WG + R+G D F P K
Sbjct: 234 PFLGRDIVELSCTKNYIAARS-GVGNVCVWGSNEQVCRIG----DDKFINFPNK------ 282
Query: 126 VKQIACGDSHCLAVTVEGEVQSWGRNQNGQLG 157
+KQI+ SH L ++ +GE+ SWG +++ QL
Sbjct: 283 IKQISASTSHILVLSEKGEIFSWGNSEDNQLS 314
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 28/189 (14%)
Query: 195 GELYGWGWGRYGNLGLGDRNDRLIPEKVATVDREKMVMVACGWRHTISVSSSGRLYSYGW 254
G LY WG G + LIP + + G+ H+++++ +G LY +G
Sbjct: 14 GVLYCWGDKFSGKPTF----NPLIP---------NICFMDNGYNHSLALTETGELYGWGD 60
Query: 255 SKYGQLGHGDFKDHL-VPCQLEALRESFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 313
+++ QL + P +++ + + IS G + A+ +G LY WG G
Sbjct: 61 NRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVWGTLIEG--- 117
Query: 314 VGDNVDHCSPVQVKFPLDQKVVQISCGWRHTLAVT------ERQNVFSWGRGTNGQLGHG 367
C+ K L + V +S G H V E+++V++WG GQLG
Sbjct: 118 -----GKCTESPTKVDLLKGVTCVSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVV 172
Query: 368 ESSDRNSPK 376
S N+P+
Sbjct: 173 GDSITNAPR 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,808,310
Number of Sequences: 539616
Number of extensions: 7843927
Number of successful extensions: 14404
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 12289
Number of HSP's gapped (non-prelim): 632
length of query: 446
length of database: 191,569,459
effective HSP length: 121
effective length of query: 325
effective length of database: 126,275,923
effective search space: 41039674975
effective search space used: 41039674975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)