BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013298
(446 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/476 (41%), Positives = 282/476 (59%), Gaps = 67/476 (14%)
Query: 25 TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVP--GTGDVACDEYHKY 81
T+ FP GF+FG+ ++AYQ EGA EDGR +IWDTFAH G + DVA D+YH++
Sbjct: 13 TRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFGKITDFSNADVAVDQYHRF 72
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 141
+ED++LMAD G+DAYRFSI+WSR+ PNG G VN G+ +YN LI+ L++ GIQP+VTL+H
Sbjct: 73 EEDIQLMADMGMDAYRFSIAWSRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYH 132
Query: 142 LDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA 201
DLPQALED+Y GW++R IV DF AYA+ CFREFGDRV +W T+NEP+ A+ GYD G+
Sbjct: 133 WDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQ 192
Query: 202 PPKRCSPPLN-NCSRGNSSTEPYMAVHHLLLAHASVARL--------------------- 239
P RCS L+ C GNS TEPY+ HH +LAHA+ A +
Sbjct: 193 APGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMW 252
Query: 240 ------------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGS 275
A+P +GDYP TM+ G RLP FT E+ +KG+
Sbjct: 253 FEPMSNTTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRARVGERLPRFTADEAAVVKGA 312
Query: 276 ADFIGVINYCMIYIKDNPSSLKQEHRDWS-ADTATMAFFEQDTAASSNE---------PS 325
DF+G+ +Y Y + N +++ + + ADT T++ ++ + P
Sbjct: 313 LDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVPR 372
Query: 326 SLQIVLEYFKRVYGNPPIYVHENGLATPRH------SSLEDISRVKYLHAYIGSVLDAVR 379
++ ++ Y K Y +PP+Y+ ENG+ + +L+D R+KY + Y+ ++ +++
Sbjct: 373 GMRSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIK 432
Query: 380 -NGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
+G + RGYF WS LD +E GY+S +GLY+VD D +LKRYPK S W+ LK
Sbjct: 433 EDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKD-NLKRYPKNSVQWFKALLK 487
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 357 bits (916), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 201/472 (42%), Positives = 265/472 (56%), Gaps = 69/472 (14%)
Query: 25 TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPGT--GDVACDEYHKY 81
++ FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV G GDVA D+YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 141
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 142 LDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA 201
DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A++GYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 202 PPKRCSPPLNNCSR-GNSSTEPYMAVHHLLLAH-ASVARLVA------------------ 241
PPKRC+ C+ GNS+TEPY+ H+ LL+H A+VAR
Sbjct: 196 PPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW 251
Query: 242 --------------------------NPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGS 275
+PL+ G YP+ M+ RLP FT +++ +KGS
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGS 311
Query: 276 ADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTA-----ASSN----EPSS 326
AD+IG+ Y Y+K ++Q +SAD F ++ A+SN P
Sbjct: 312 ADYIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 327 LQIVLEYFKRVYGNPPIYVHENGLATP----RHSSLEDISRVKYLHAYIGSVLDAVRNGS 382
+ + Y K+ YGNP + + ENG+ P R L D +RV + +Y+ + A+ G+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGA 430
Query: 383 NTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
N GYF WS LD FE L GY S +G+ YVD + L+R+PK SA W+ LK
Sbjct: 431 NVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 357 bits (915), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/472 (42%), Positives = 265/472 (56%), Gaps = 69/472 (14%)
Query: 25 TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPGT--GDVACDEYHKY 81
++ FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV G GDVA D+YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 141
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 142 LDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA 201
DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A++GYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 202 PPKRCSPPLNNCSR-GNSSTEPYMAVHHLLLAH-ASVARLVA------------------ 241
PPKRC+ C+ GNS+TEPY+ H+ LL+H A+VAR
Sbjct: 196 PPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW 251
Query: 242 --------------------------NPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGS 275
+PL+ G YP+ M+ RLP FT +++ +KGS
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGS 311
Query: 276 ADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTA-----ASSN----EPSS 326
AD+IG+ Y Y+K ++Q +SAD A F ++ A+SN P
Sbjct: 312 ADYIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTAVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 327 LQIVLEYFKRVYGNPPIYVHENGLATP----RHSSLEDISRVKYLHAYIGSVLDAVRNGS 382
+ + Y K+ YGNP + + NG+ P R L D +RV + +Y+ + A+ G+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGA 430
Query: 383 NTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
N GYF WS LD FE L GY S +G+ YVD + L+R+PK SA W+ LK
Sbjct: 431 NVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/472 (42%), Positives = 265/472 (56%), Gaps = 69/472 (14%)
Query: 25 TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPGT--GDVACDEYHKY 81
++ FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV G GDVA D+YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 141
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 142 LDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA 201
DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T N+P A++GYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPRIVALLGYDQGTN 195
Query: 202 PPKRCSPPLNNCSR-GNSSTEPYMAVHHLLLAH-ASVARLVA------------------ 241
PPKRC+ C+ GNS+TEPY+ H+ LL+H A+VAR
Sbjct: 196 PPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW 251
Query: 242 --------------------------NPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGS 275
+PL+ G YP+ M+ RLP FT +++ +KGS
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGS 311
Query: 276 ADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTA-----ASSN----EPSS 326
AD+IG+ Y Y+K ++Q +SAD F ++ A+SN P
Sbjct: 312 ADYIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 327 LQIVLEYFKRVYGNPPIYVHENGLATP----RHSSLEDISRVKYLHAYIGSVLDAVRNGS 382
+ + Y K+ YGNP + + ENG+ P R L D +RV + +Y+ + A+ G+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGA 430
Query: 383 NTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
N GYF WS LD FE L GY S +G+ YVD + L+R+PK SA W+ LK
Sbjct: 431 NVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 355 bits (910), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/472 (42%), Positives = 264/472 (55%), Gaps = 69/472 (14%)
Query: 25 TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPGT--GDVACDEYHKY 81
++ FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV G GDVA D+YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 141
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 142 LDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA 201
DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A++GYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 202 PPKRCSPPLNNCSR-GNSSTEPYMAVHHLLLAH-ASVARLVA------------------ 241
PPKRC+ C+ GNS+TEPY+ H+ LL+H A+VAR
Sbjct: 196 PPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW 251
Query: 242 --------------------------NPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGS 275
+PL+ G YP+ M+ RLP FT +++ +KGS
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGS 311
Query: 276 ADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTA-----ASSN----EPSS 326
AD+IG+ Y Y+K ++Q +SAD F ++ A+SN P
Sbjct: 312 ADYIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 327 LQIVLEYFKRVYGNPPIYVHENGLATP----RHSSLEDISRVKYLHAYIGSVLDAVRNGS 382
+ + Y K+ YGNP + + NG+ P R L D +RV + +Y+ + A+ G+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITSNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGA 430
Query: 383 NTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
N GYF WS LD FE L GY S +G+ YVD + L+R+PK SA W+ LK
Sbjct: 431 NVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 355 bits (910), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/472 (42%), Positives = 264/472 (55%), Gaps = 69/472 (14%)
Query: 25 TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPGT--GDVACDEYHKY 81
++ FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV G GDVA D+YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 141
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 142 LDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA 201
DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A++GYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 202 PPKRCSPPLNNCSR-GNSSTEPYMAVHHLLLAH-ASVARLVA------------------ 241
PPKRC+ C+ GNS+TEPY+ H+ LL+H A+VAR
Sbjct: 196 PPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW 251
Query: 242 --------------------------NPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGS 275
+PL+ G YP+ M+ RLP FT +++ +KGS
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGS 311
Query: 276 ADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTA-----ASSN----EPSS 326
AD+IG+ Y Y+K ++Q +SAD F ++ A+SN P
Sbjct: 312 ADYIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 327 LQIVLEYFKRVYGNPPIYVHENGLATP----RHSSLEDISRVKYLHAYIGSVLDAVRNGS 382
+ + Y K+ YGNP + + NG+ P R L D +RV + +Y+ + A+ G+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITANGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGA 430
Query: 383 NTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
N GYF WS LD FE L GY S +G+ YVD + L+R+PK SA W+ LK
Sbjct: 431 NVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 354 bits (909), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 202/475 (42%), Positives = 266/475 (56%), Gaps = 67/475 (14%)
Query: 25 TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVP----GTGDVACDEYHK 80
++ FP GFIFG+ +S+YQ EG A E GR PSIWDTF H GDVA D YH
Sbjct: 30 SRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHL 89
Query: 81 YKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVT 138
YKEDV+LM D G+DAYRFSISW+R++PNG RG VN +G++YYNNLINEL+S G+QP +T
Sbjct: 90 YKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFIT 149
Query: 139 LHHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDF 198
L H D PQALED+Y G+++ I+ DF YA++CF+EFGDRV W T NEP F GY
Sbjct: 150 LFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYAT 209
Query: 199 GIAPPKRCSP-PLNNCSRGNSSTEPYMAVHHLLLAHASVARL------------------ 239
G+ P RCSP NCS G+S EPY A HH LLAHA RL
Sbjct: 210 GLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLV 269
Query: 240 ---------------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQI 272
+PL+ GDYP +M+ G+RLP FT +S+ +
Sbjct: 270 SHWFVPFSRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLV 329
Query: 273 KGSADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNE--------P 324
KG+ DFIG+ Y Y + P S + + A + P
Sbjct: 330 KGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYP 389
Query: 325 SSLQIVLEYFKRVYGNPPIYVHENGL------ATPRHSSLEDISRVKYLHAYIGSVLDAV 378
+ +L Y K YGNP +Y+ ENG+ P +L+D +R++Y H ++ S+L A+
Sbjct: 390 QGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAI 449
Query: 379 RNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFL 433
R+G+N +GYF WS LD FE +GY +G+ +VD +D KRYPK SA W+ +FL
Sbjct: 450 RDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYND-GRKRYPKNSAHWFKKFL 503
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 354 bits (908), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 200/472 (42%), Positives = 264/472 (55%), Gaps = 69/472 (14%)
Query: 25 TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPGT--GDVACDEYHKY 81
++ FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV G GDVA D+YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 141
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 142 LDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA 201
DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A++GYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 202 PPKRCSPPLNNCSR-GNSSTEPYMAVHHLLLAH-ASVARLVA------------------ 241
PPKRC+ C+ GNS+TEPY+ H+ LL+H A+VAR
Sbjct: 196 PPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW 251
Query: 242 --------------------------NPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGS 275
+PL+ G YP+ M+ RLP FT +++ +KGS
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGS 311
Query: 276 ADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTA-----ASSN----EPSS 326
AD+IG+ Y Y+K ++Q +SAD F ++ A+SN P
Sbjct: 312 ADYIGINQYTASYMKGQ-QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 327 LQIVLEYFKRVYGNPPIYVHENGLATP----RHSSLEDISRVKYLHAYIGSVLDAVRNGS 382
+ + Y K+ YGNP + + NG+ P R L D +RV + +Y+ + A+ G+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGA 430
Query: 383 NTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
N GYF WS LD FE L GY S +G+ YVD + L+R+PK SA W+ LK
Sbjct: 431 NVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 353 bits (906), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/472 (42%), Positives = 264/472 (55%), Gaps = 69/472 (14%)
Query: 25 TKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPGT--GDVACDEYHKY 81
++ FP F+FG+ TSAYQVEG A GR PSIWD FAH GNV G GDVA D+YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHH 141
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYNNLIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 142 LDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA 201
DLP ALE +YGGW+N + FT YAD CF+ FG+RV +W T NEP A++GYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 202 PPKRCSPPLNNCSR-GNSSTEPYMAVHHLLLAH-ASVARLVA------------------ 241
PPKRC+ C+ GNS+TEPY+ H+ LL+H A+VAR
Sbjct: 196 PPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNW 251
Query: 242 --------------------------NPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGS 275
+PL+ G YP+ M+ RLP FT +++ +KGS
Sbjct: 252 YEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGS 311
Query: 276 ADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTA-----ASSN----EPSS 326
AD+IG+ Y Y+K ++Q ++AD F ++ A+SN P
Sbjct: 312 ADYIGINQYTASYMKGQ-QLMQQTPTSYAADWQVTYVFAKNGKPIGPQANSNWLYIVPWG 370
Query: 327 LQIVLEYFKRVYGNPPIYVHENGLATP----RHSSLEDISRVKYLHAYIGSVLDAVRNGS 382
+ + Y K+ YGNP + + NG+ P R L D +RV + +Y+ + A+ G+
Sbjct: 371 MYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGA 430
Query: 383 NTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
N GYF WS LD FE L GY S +G+ YVD + L+R+PK SA W+ LK
Sbjct: 431 NVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFN--TLERHPKASAYWFRDMLK 480
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 333 bits (853), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 262/473 (55%), Gaps = 69/473 (14%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAG----NVPGTGDVACDEYHKYKED 84
F PGF+FG+ +SA+Q EGAA EDG+ PSIWDTF H GDVA DEYH+YKED
Sbjct: 19 FAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPEKIKDRTNGDVAIDEYHRYKED 78
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQPHVTLHHL 142
+ +M D LDAYRFSISW R++P G+ G VN +G+ YYNNLINE+++ G+QP+VTL H
Sbjct: 79 IGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHW 138
Query: 143 DLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
D+PQALEDEY G++ R IV DF YA++CF+EFGDRV +W T+NEP G +M Y +G
Sbjct: 139 DVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNAYAYGTFA 198
Query: 203 PKRCSPPLN-NCSRGNSSTEPYMAVHH--------------------------LLLAH-- 233
P RCS L NC+ G+S EPY+A H+ L++H
Sbjct: 199 PGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWF 258
Query: 234 --ASVAR---------------LVANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGSA 276
AS + +PL G YP++M+ RLP F+ ES+++ GS
Sbjct: 259 EPASKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRYLVRKRLPKFSTEESKELTGSF 318
Query: 277 DFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQD------TAASS---NEPSSL 327
DF+G +NY Y + D+ A FE + AASS P +
Sbjct: 319 DFLG-LNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLGPMAASSWLCIYPQGI 377
Query: 328 QIVLEYFKRVYGNPPIYVHENGL------ATPRHSSLEDISRVKYLHAYIGSVLDAVRNG 381
+ +L Y K Y NP IY+ ENG SL D R+ Y + ++ VL A+ +G
Sbjct: 378 RKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVLTAIGDG 437
Query: 382 SNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
N +GYF WS D E GY +GL +VD + +LKR+PKLSA W+ FLK
Sbjct: 438 VNVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKN-NLKRHPKLSAHWFKSFLK 489
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 328 bits (842), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/479 (40%), Positives = 259/479 (54%), Gaps = 86/479 (17%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA---GNVPGT-GDVACDEYHKYKED 84
F F+FG+ TSAYQ+EGA NEDG+ PS WD F H GT GDVA + YH Y+ED
Sbjct: 74 FSKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDGTNGDVAANSYHMYEED 133
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDL 144
VK + D G+ YRFSISWSR++PNG G N KG+ YYNNLIN LI +GI P+VT+ H D
Sbjct: 134 VKALKDMGMKVYRFSISWSRILPNGTGKPNQKGIDYYNNLINSLIRHGIVPYVTIWHWDT 193
Query: 145 PQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPK 204
PQALED+YGG++++ IV D+ +A++CF+ FGDRV W T NEP+ + Y GI P
Sbjct: 194 PQALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKNWFTFNEPHTYCCFSYGEGIHAPG 253
Query: 205 RCSPPLNNCS--RGNSSTEPYMAVHHLLLAHASVARLVA--------------------- 241
RCSP L +C+ G+S EPY A HH+LLAHA L
Sbjct: 254 RCSPGL-DCAVPEGDSLREPYTAGHHILLAHAEAVELFKAHYNKHGDSKIGMAFDVMGYE 312
Query: 242 ------------------------NPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGSAD 277
P+V GDYP +M+ G RLP FT E +++ S D
Sbjct: 313 PYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCD 372
Query: 278 FIGVINYCMIYIKDNPSSLKQEHRDWSAD-TATM----AFFEQDTAAS-SNE-------- 323
+G+ Y + K H D S+D T T+ A+ +T S NE
Sbjct: 373 IMGLNYYTSRFSK---------HVDISSDYTPTLNTDDAYASSETTGSDGNEIGPITGTY 423
Query: 324 -----PSSLQIVLEYFKRVYGNPPIYVHENGLATPRH-----SSLEDISRVKYLHAYIGS 373
P L +L K YGNPPI++ ENG+A L+D R+ YL +I +
Sbjct: 424 WIYMYPKGLTDLLLIMKEKYGNPPIFITENGIADVEGDPEMPDPLDDWKRLDYLQRHISA 483
Query: 374 VLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQF 432
V DA+ G++ RG+F W +D FE GY+S +GL Y+D++D + KR K SA W+++F
Sbjct: 484 VKDAIDQGADVRGHFTWGLIDNFEWGSGYSSRFGLVYIDKEDGN-KRKLKKSAKWFAKF 541
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 327 bits (839), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 281/518 (54%), Gaps = 98/518 (18%)
Query: 21 AVEYTKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA--GNVPG--TGDVACD 76
A +++DFP FI G+G+SAYQ+EG A + GR PSIWDTF H + G GDVA D
Sbjct: 14 ATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVD 73
Query: 77 EYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQ 134
YH YKEDV ++ + GLDAYRFSISWSR++P GR G VN +G+ YYNNLI+ L++ GI+
Sbjct: 74 SYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIK 133
Query: 135 PHVTLHHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMV 194
P VTL H D+PQALEDEYGG+++ IV DF YA++CF EFGDRV +W T+NEP F++
Sbjct: 134 PFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVH 193
Query: 195 GYDFGIAPP----------------KRCS--PPLNNCSRGNSSTEPYMAVH--------- 227
GY G+ P RCS P CS GN TEPY H
Sbjct: 194 GYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAA 253
Query: 228 --------------HLLLAHAS----------------VARLV-------ANPLVYGDYP 250
+ ++HA+ AR + P+ GDYP
Sbjct: 254 VELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYP 313
Query: 251 KTMKQNAGSRLPAFTDRESQQIKGSADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATM 310
K+MK+ GSRLP F+ +S+ +KGS DF+G+ Y Y+ N S+ ++S +T
Sbjct: 314 KSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVT-NASTNSSGSNNFSYNTDIH 372
Query: 311 AFFEQDTAASSNEPSS-----------LQIVLEYFKRVYGNPPIYVHENGLATPRHSSL- 358
+E D P S ++ +L Y K+ Y P IYV ENG+ ++++L
Sbjct: 373 VTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLT 432
Query: 359 -----EDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDR 413
+D R+KYL +I +V A+ +G N +GYF WS LD FE +GY +G+ ++D
Sbjct: 433 LSEARKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDY 492
Query: 414 DDPDLKRYPKLSALW-YSQFLKG--------RSVRSDE 442
+D + RYPK SA+W + F K RS+R D+
Sbjct: 493 ND-NFARYPKDSAVWLMNSFHKNISKLPAVKRSIREDD 529
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 327 bits (837), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 198/495 (40%), Positives = 272/495 (54%), Gaps = 89/495 (17%)
Query: 21 AVEYTKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA--GNVPG--TGDVACD 76
A +++DFP FI G+G+SAYQ+EG A + GR PSIWDTF H + G GDVA D
Sbjct: 14 ATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVD 73
Query: 77 EYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQ 134
YH YKEDV ++ + GLDAYRFSISWSR++P GR G VN +G+ YYNNLI+ L++ GI+
Sbjct: 74 SYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIK 133
Query: 135 PHVTLHHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMV 194
P VTL H D+PQALEDEYGG+++ IV DF YA++CF EFGDRV +W T+NEP F++
Sbjct: 134 PFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVH 193
Query: 195 GYDFGIAPP----------------KRCS--PPLNNCSRGNSSTEPYMAVH--------- 227
GY G+ P RCS P CS GN TEPY H
Sbjct: 194 GYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAA 253
Query: 228 --------------HLLLAHAS----------------VARLV-------ANPLVYGDYP 250
+ ++HA+ AR + P+ GDYP
Sbjct: 254 VELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYP 313
Query: 251 KTMKQNAGSRLPAFTDRESQQIKGSADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATM 310
K+MK+ GSRLP F+ +S+ +KGS DF+G+ Y Y+ N S+ ++S +T
Sbjct: 314 KSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVT-NASTNSSGSNNFSYNTDIH 372
Query: 311 AFFEQDTAASSNEPSS-----------LQIVLEYFKRVYGNPPIYVHENGLATPRHSSL- 358
+E D P S ++ +L Y K+ Y P IYV ENG+ ++++L
Sbjct: 373 VTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLT 432
Query: 359 -----EDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDR 413
+D R+KYL +I +V A+ +G N +GYF WS LD FE +GY +G+ ++D
Sbjct: 433 LSEARKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDY 492
Query: 414 DDPDLKRYPKLSALW 428
+D + RYPK SA+W
Sbjct: 493 ND-NFARYPKDSAVW 506
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 326 bits (835), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/481 (38%), Positives = 251/481 (52%), Gaps = 73/481 (15%)
Query: 26 KNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVP----GTGDVACDEYHKY 81
+ DFP FIFG+G SAYQ EGA NE R PSIWDTF G+ A + YH Y
Sbjct: 40 RRDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYHMY 99
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQPHVTL 139
KED+K+M TGL++YRFSISWSR++P GR VN G+++Y++ I+EL++ GI+P VTL
Sbjct: 100 KEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTL 159
Query: 140 HHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFG 199
H DLPQALEDEYGG+++ IV DF YA+ CF EFGD++ YWTT NEP+ FA+ GY G
Sbjct: 160 FHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALG 219
Query: 200 IAPPKRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVARLVAN----------------- 242
P R G+ + EPY+ H++LLAH + N
Sbjct: 220 EFAPGRGG----KGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSM 275
Query: 243 ----------------------------PLVYGDYPKTMKQNAGSRLPAFTDRESQQIKG 274
PL GDYPK+M++ RLP F+ +S+++KG
Sbjct: 276 WMEPLSDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGRLPKFSADDSEKLKG 335
Query: 275 SADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNE---------PS 325
DFIG+ Y Y+ + S E + D FE++ + P
Sbjct: 336 CYDFIGMNYYTATYVTNAVKS-NSEKLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPW 394
Query: 326 SLQIVLEYFKRVYGNPPIYVHENGLATPRHSSL------EDISRVKYLHAYIGSVLDAVR 379
L +L Y K Y P +YV E+G+ + + D R Y ++ SV DA+
Sbjct: 395 GLYKLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAID 454
Query: 380 NGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRSVR 439
+G N +GYFVWSF D FE GY YG+ +VD +RYPK SA+WY F+ G+S
Sbjct: 455 DGVNVKGYFVWSFFDNFEWNLGYICRYGIIHVDY--KSFERYPKESAIWYKNFIAGKSTT 512
Query: 440 S 440
S
Sbjct: 513 S 513
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 325 bits (834), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/495 (39%), Positives = 272/495 (54%), Gaps = 89/495 (17%)
Query: 21 AVEYTKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA--GNVPG--TGDVACD 76
A +++DFP FI G+G+SAYQ+EG A + GR PSIWDTF H + G GDVA D
Sbjct: 14 ATRISRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVD 73
Query: 77 EYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQ 134
YH YKEDV ++ + GLDAYRFSISWSR++P GR G VN +G+ YYNNLI+ L++ GI+
Sbjct: 74 SYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIK 133
Query: 135 PHVTLHHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMV 194
P VTL H D+PQALEDEYGG+++ IV DF YA++CF EFGDRV +W T+N+P F++
Sbjct: 134 PFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVH 193
Query: 195 GYDFGIAPP----------------KRCS--PPLNNCSRGNSSTEPYMAVH--------- 227
GY G+ P RCS P CS GN TEPY H
Sbjct: 194 GYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAA 253
Query: 228 --------------HLLLAHAS----------------VARLV-------ANPLVYGDYP 250
+ ++HA+ AR + P+ GDYP
Sbjct: 254 VELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYP 313
Query: 251 KTMKQNAGSRLPAFTDRESQQIKGSADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATM 310
K+MK+ GSRLP F+ +S+ +KGS DF+G+ Y Y+ N S+ ++S +T
Sbjct: 314 KSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVT-NASTNSSGSNNFSYNTDIH 372
Query: 311 AFFEQDTAASSNEPSS-----------LQIVLEYFKRVYGNPPIYVHENGLATPRHSSL- 358
+E D P S ++ +L Y K+ Y P IYV ENG+ ++++L
Sbjct: 373 VTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLT 432
Query: 359 -----EDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDR 413
+D R+KYL +I +V A+ +G N +GYF WS LD FE +GY +G+ ++D
Sbjct: 433 LSEARKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDY 492
Query: 414 DDPDLKRYPKLSALW 428
+D + RYPK SA+W
Sbjct: 493 ND-NFARYPKDSAVW 506
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 324 bits (830), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 189/479 (39%), Positives = 253/479 (52%), Gaps = 86/479 (17%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA----GNVPGTGDVACDEYHKYKED 84
F F+FG+ TSAYQ+EGA NEDG+ PS WD F H + GDVA + YH Y+ED
Sbjct: 74 FDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEED 133
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDL 144
VK + D G+ YRFSISWSR++P+G G VN G+ YYN LIN LI I P+VT+ H D
Sbjct: 134 VKALKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDT 193
Query: 145 PQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPK 204
PQALED+YGG++NR IV D+ +A+VCF+ FGDRV W T NEP+ + Y GI P
Sbjct: 194 PQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGIHAPG 253
Query: 205 RCSPPLNNCS--RGNSSTEPYMAVHHLLLAHASVARLVA--------------------- 241
RCSP + +C+ G+S EPY A HH+LLAHA +L
Sbjct: 254 RCSPGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYE 312
Query: 242 ------------------------NPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGSAD 277
P+V GDYP +M+ G RLP FT E +++ S D
Sbjct: 313 PYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCD 372
Query: 278 FIGVINYCMIYIKDNPSSLKQEHRDWSAD-TATM----AFFEQDTAASSNE--------- 323
+G+ Y + K H D S D T T+ A+ +T S
Sbjct: 373 IMGLNYYTSRFSK---------HVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTY 423
Query: 324 -----PSSLQIVLEYFKRVYGNPPIYVHENGLATPRHSS-----LEDISRVKYLHAYIGS 373
P L +L K YGNPP+++ ENG+A L+D R+ YL +I +
Sbjct: 424 WIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISA 483
Query: 374 VLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQF 432
V DA+ G++ RG+F W +D FE GY+S +GL Y+D++D + KR K SA W+S+F
Sbjct: 484 VKDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGN-KRKLKKSAKWFSKF 541
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 322 bits (824), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/479 (39%), Positives = 252/479 (52%), Gaps = 86/479 (17%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA----GNVPGTGDVACDEYHKYKED 84
F F+FG+ TSAYQ+EGA NEDG+ PS WD F H + GDVA + YH Y+ED
Sbjct: 74 FDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEED 133
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDL 144
VK + D G+ YRFSISWSR++P+G G VN G+ YYN LIN LI I P+VT+ H D
Sbjct: 134 VKALKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDT 193
Query: 145 PQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPK 204
PQALED+YGG++NR IV D+ +A+VCF+ FGDRV W T N P+ + Y GI P
Sbjct: 194 PQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNAPHTYCCFSYGEGIHAPG 253
Query: 205 RCSPPLNNCS--RGNSSTEPYMAVHHLLLAHASVARLVA--------------------- 241
RCSP + +C+ G+S EPY A HH+LLAHA +L
Sbjct: 254 RCSPGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYE 312
Query: 242 ------------------------NPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGSAD 277
P+V GDYP +M+ G RLP FT E +++ S D
Sbjct: 313 PYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCD 372
Query: 278 FIGVINYCMIYIKDNPSSLKQEHRDWSAD-TATM----AFFEQDTAASSNE--------- 323
+G+ Y + K H D S D T T+ A+ +T S
Sbjct: 373 IMGLNYYTSRFSK---------HVDMSPDFTPTLNTDDAYASSETTGSDGNDIGPITGTY 423
Query: 324 -----PSSLQIVLEYFKRVYGNPPIYVHENGLATPRHSS-----LEDISRVKYLHAYIGS 373
P L +L K YGNPP+++ ENG+A L+D R+ YL +I +
Sbjct: 424 WIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISA 483
Query: 374 VLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQF 432
V DA+ G++ RG+F W +D FE GY+S +GL Y+D++D + KR K SA W+S+F
Sbjct: 484 VKDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGN-KRKLKKSAKWFSKF 541
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 316 bits (810), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/497 (36%), Positives = 261/497 (52%), Gaps = 93/497 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVP------GTGDVACDEYHKYK 82
FPP F+FG+ TSAYQ+EGA NEDG+ PS WD F H N P GDVA D YH Y
Sbjct: 76 FPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCH--NFPEWIVDRSNGDVAADSYHMYA 133
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQPHVTLH 140
EDV+L+ + G+DAYRFSISW R++P G G +N K ++YYN LI+ L+ GI+P++T+
Sbjct: 134 EDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIF 193
Query: 141 HLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGI 200
H D PQAL D YGG+++ I+KD+T +A VCF +FG +V W T NEP F V Y G+
Sbjct: 194 HWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGV 253
Query: 201 APPKRCSPPLNNCS--RGNSSTEPYMAVHHLLLAHASVARL------------------- 239
P RCSP + +C+ GNS +EPY+ H+LL AHA +
Sbjct: 254 LAPGRCSPGV-SCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGADGRIGLALNVF 312
Query: 240 -------------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKG 274
P+V GDYP +M+ +A R+P F ++E +++ G
Sbjct: 313 GRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVG 372
Query: 275 SADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATM-----AFFEQDTAASSNE------ 323
S D IG+ Y + K H D S + + + A+ Q+T
Sbjct: 373 SYDMIGINYYTSTFSK---------HIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPT 423
Query: 324 --------PSSLQIVLEYFKRVYGNPPIYVHENGLA------TPRHSSLEDISRVKYLHA 369
P L +L K YGNPP+Y+ ENG+ P+ +LED +R+ Y+
Sbjct: 424 GNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQR 483
Query: 370 YIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWY 429
++ + ++ G++ RGYF WS LD FE GY +G+ YVDR++ +R K SA W
Sbjct: 484 HLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDREN-GCERTMKRSARWL 542
Query: 430 SQFL-KGRSVRSDEVFT 445
+F + V ++++ T
Sbjct: 543 QEFNGAAKKVENNKILT 559
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 315 bits (807), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 261/497 (52%), Gaps = 93/497 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVP------GTGDVACDEYHKYK 82
FPP F+FG+ TSAYQ+EGA NEDG+ PS WD F H N P GDVA D YH Y
Sbjct: 76 FPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCH--NFPEWIVDRSNGDVAADSYHMYA 133
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQPHVTLH 140
EDV+L+ + G+DAYRFSISW R++P G G +N KG++YYN LI+ L+ GI+P++T+
Sbjct: 134 EDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLENGIEPYITIF 193
Query: 141 HLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGI 200
H D PQAL + YGG+++ I+KD+T +A VCF +FG V W T N+P F V Y G+
Sbjct: 194 HWDTPQALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNDPETFCSVSYGTGV 253
Query: 201 APPKRCSPPLNNCS--RGNSSTEPYMAVHHLLLAHASVARL------------------- 239
P RCSP + +C+ GNS +EPY+ H+LL AHA +
Sbjct: 254 LAPGRCSPGV-SCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGADGRIGLALNVF 312
Query: 240 -------------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKG 274
P+V GDYP +M+ +A R+P F ++E +++ G
Sbjct: 313 GRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVG 372
Query: 275 SADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATM-----AFFEQDTAASSNE------ 323
S D IG+ Y + K H D S + + + A+ Q+T
Sbjct: 373 SYDMIGINYYTSTFSK---------HIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPT 423
Query: 324 --------PSSLQIVLEYFKRVYGNPPIYVHENGLA------TPRHSSLEDISRVKYLHA 369
P L +L K YGNPP+Y+ ENG+ P+ +LED +R+ Y+
Sbjct: 424 GNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQR 483
Query: 370 YIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWY 429
++ + ++ G++ RGYF WS LD FE GY +G+ YVDR++ +R K SA W
Sbjct: 484 HLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDREN-GCERTMKRSARWL 542
Query: 430 SQFL-KGRSVRSDEVFT 445
+F + V ++++ T
Sbjct: 543 QEFNGAAKKVENNKILT 559
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 315 bits (807), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/497 (36%), Positives = 260/497 (52%), Gaps = 93/497 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVP------GTGDVACDEYHKYK 82
FPP F+FG+ TSAYQ+EGA NEDG+ PS WD F H N P GDVA D YH Y
Sbjct: 76 FPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCH--NFPEWIVDRSNGDVAADSYHMYA 133
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNNLINELISYGIQPHVTLH 140
EDV+L+ + G+DAYRFSISW R++P G G +N K ++YYN LI+ L+ GI+P++T+
Sbjct: 134 EDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIF 193
Query: 141 HLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGI 200
H D PQAL D YGG+++ I+KD+T +A VCF +FG V W T NEP F V Y G+
Sbjct: 194 HWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPETFCSVSYGTGV 253
Query: 201 APPKRCSPPLNNCS--RGNSSTEPYMAVHHLLLAHASVARL------------------- 239
P RCSP + +C+ GNS +EPY+ H+LL AHA +
Sbjct: 254 LAPGRCSPGV-SCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGADGRIGLALNVF 312
Query: 240 -------------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKG 274
P+V GDYP +M+ +A R+P F ++E +++ G
Sbjct: 313 GRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVG 372
Query: 275 SADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATM-----AFFEQDTAASSNE------ 323
S D IG+ Y + K H D S + + + A+ Q+T
Sbjct: 373 SYDMIGINYYTSTFSK---------HIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPT 423
Query: 324 --------PSSLQIVLEYFKRVYGNPPIYVHENGLA------TPRHSSLEDISRVKYLHA 369
P L +L K YGNPP+Y+ ENG+ P+ +LED +R+ Y+
Sbjct: 424 GNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQR 483
Query: 370 YIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWY 429
++ + ++ G++ RGYF WS LD FE GY +G+ YVDR++ +R K SA W
Sbjct: 484 HLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDREN-GCERTMKRSARWL 542
Query: 430 SQFL-KGRSVRSDEVFT 445
+F + V ++++ T
Sbjct: 543 QEFNGAAKKVENNKILT 559
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 254/490 (51%), Gaps = 101/490 (20%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVP------GTGDVACDEYHKYK 82
FP F FG+ TSAYQ+EGA NEDG+ S WD F H N P D+ + YH YK
Sbjct: 24 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCH--NHPERILDGSNSDIGANSYHMYK 81
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTLH 140
DV+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN L+ GI+P+VT+
Sbjct: 82 TDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIF 141
Query: 141 HLDLPQALEDEYGGWIN---RMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYD 197
H D+PQALE++YGG+++ + IV+D+T +A VCF FGD+V W T N+P F V Y
Sbjct: 142 HWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSVSYG 201
Query: 198 FGIAPPKRCSPPLNNCS--RGNSSTEPYMAVHHLLLAHASVARL---------------- 239
G+ P RCSP L +C+ GNS EPY A H++LLAHA L
Sbjct: 202 TGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLAF 260
Query: 240 ----------------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQ 271
P+V GDYP +M+ A RLP F D + ++
Sbjct: 261 DVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEK 320
Query: 272 IKGSADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNE-------- 323
+ GS + +G+ Y + K+ D S + + + D A +S E
Sbjct: 321 LAGSYNMLGLNYYTSRFSKN---------IDISPNYSPV--LNTDDAYASQEVNGPDGKP 369
Query: 324 -------------PSSLQIVLEYFKRVYGNPPIYVHENGLA--------TPRHSSLEDIS 362
P L+ +L K YGNPPIY+ ENG+ P ++L D
Sbjct: 370 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 429
Query: 363 RVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYP 422
R+ Y+ +I ++ +++ GSN +GYF WS LD FE G+ YG+ YVDR++ + RY
Sbjct: 430 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN-NCTRYM 488
Query: 423 KLSALWYSQF 432
K SA W +F
Sbjct: 489 KESAKWLKEF 498
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 303 bits (776), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 253/490 (51%), Gaps = 101/490 (20%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVP------GTGDVACDEYHKYK 82
FP F FG+ TSAYQ+EGA NEDG+ S WD F H N P D+ + YH YK
Sbjct: 19 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCH--NHPERILDGSNSDIGANSYHMYK 76
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTLH 140
DV+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN L+ GI+P+VT+
Sbjct: 77 TDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIF 136
Query: 141 HLDLPQALEDEYGGWIN---RMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYD 197
H D+PQALE++YGG+++ + IV+D+T +A VCF FGD+V W T NEP F Y
Sbjct: 137 HWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYG 196
Query: 198 FGIAPPKRCSPPLNNCS--RGNSSTEPYMAVHHLLLAHASVARL---------------- 239
G+ P RCSP L +C+ GNS EPY A H++LLAHA L
Sbjct: 197 TGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLAF 255
Query: 240 ----------------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQ 271
P+V GDYP +M+ A RLP F D + ++
Sbjct: 256 DVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEK 315
Query: 272 IKGSADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNE-------- 323
+ GS + +G+ Y + K+ D S + + + D A +S E
Sbjct: 316 LAGSYNMLGLNYYTSRFSKN---------IDISPNYSPV--LNTDDAYASQEVNGPDGKP 364
Query: 324 -------------PSSLQIVLEYFKRVYGNPPIYVHENGLA--------TPRHSSLEDIS 362
P L+ +L K YGNPPIY+ ENG+ P ++L D
Sbjct: 365 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 424
Query: 363 RVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYP 422
R+ Y+ +I ++ +++ GSN +GYF WS LD FE G+ YG+ YVDR++ + RY
Sbjct: 425 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN-NCTRYM 483
Query: 423 KLSALWYSQF 432
K SA W +F
Sbjct: 484 KESAKWLKEF 493
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 253/490 (51%), Gaps = 101/490 (20%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVP------GTGDVACDEYHKYK 82
FP F FG+ TSAYQ+EGA NEDG+ S WD F H N P D+ + YH YK
Sbjct: 24 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCH--NHPERILDGSNSDIGANSYHMYK 81
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTLH 140
DV+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN L+ GI+P+VT+
Sbjct: 82 TDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIF 141
Query: 141 HLDLPQALEDEYGGWIN---RMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYD 197
H D+PQALE++YGG+++ + IV+D+T +A VCF FGD+V W T NEP F Y
Sbjct: 142 HWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYG 201
Query: 198 FGIAPPKRCSPPLNNCS--RGNSSTEPYMAVHHLLLAHASVARL---------------- 239
G+ P RCSP L +C+ GNS EPY A H++LLAHA L
Sbjct: 202 TGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLAF 260
Query: 240 ----------------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQ 271
P+V GDYP +M+ A RLP F D + ++
Sbjct: 261 DVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEK 320
Query: 272 IKGSADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNE-------- 323
+ GS + +G+ Y + K+ D S + + + D A +S E
Sbjct: 321 LAGSYNMLGLNYYTSRFSKN---------IDISPNYSPV--LNTDDAYASQEVNGPDGKP 369
Query: 324 -------------PSSLQIVLEYFKRVYGNPPIYVHENGLA--------TPRHSSLEDIS 362
P L+ +L K YGNPPIY+ ENG+ P ++L D
Sbjct: 370 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 429
Query: 363 RVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYP 422
R+ Y+ +I ++ +++ GSN +GYF WS LD FE G+ YG+ YVDR++ + RY
Sbjct: 430 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN-NCTRYM 488
Query: 423 KLSALWYSQF 432
K SA W +F
Sbjct: 489 KESAKWLKEF 498
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/490 (36%), Positives = 253/490 (51%), Gaps = 101/490 (20%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVP------GTGDVACDEYHKYK 82
FP F FG+ TSAYQ+EGA NEDG+ S WD F H N P D+ + YH YK
Sbjct: 24 FPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCH--NHPERILDGSNSDIGANSYHMYK 81
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTLH 140
DV+L+ + G+DAYRFSISW R++P G G +NP G++YY NLIN L+ GI+P+VT+
Sbjct: 82 TDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIF 141
Query: 141 HLDLPQALEDEYGGWIN---RMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYD 197
H D+PQALE++YGG+++ + IV+D+T +A VCF FGD+V W T N+P F Y
Sbjct: 142 HWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFSYG 201
Query: 198 FGIAPPKRCSPPLNNCS--RGNSSTEPYMAVHHLLLAHASVARL---------------- 239
G+ P RCSP L +C+ GNS EPY A H++LLAHA L
Sbjct: 202 TGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLAF 260
Query: 240 ----------------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQ 271
P+V GDYP +M+ A RLP F D + ++
Sbjct: 261 DVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEK 320
Query: 272 IKGSADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNE-------- 323
+ GS + +G+ Y + K+ D S + + + D A +S E
Sbjct: 321 LAGSYNMLGLNYYTSRFSKN---------IDISPNYSPV--LNTDDAYASQEVNGPDGKP 369
Query: 324 -------------PSSLQIVLEYFKRVYGNPPIYVHENGLA--------TPRHSSLEDIS 362
P L+ +L K YGNPPIY+ ENG+ P ++L D
Sbjct: 370 IGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYK 429
Query: 363 RVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYP 422
R+ Y+ +I ++ +++ GSN +GYF WS LD FE G+ YG+ YVDR++ + RY
Sbjct: 430 RLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN-NCTRYM 488
Query: 423 KLSALWYSQF 432
K SA W +F
Sbjct: 489 KESAKWLKEF 498
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 245/469 (52%), Gaps = 80/469 (17%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVP--GTGDVACDEYHKYKEDV 85
P F++G T+AYQ+EG+ ++DGR PSIWDTF A G + +GDVA D Y++++EDV
Sbjct: 9 LPKSFVWGYATAAYQIEGSPDKDGREPSIWDTFCKAPGKIADGSSGDVATDSYNRWREDV 68
Query: 86 KLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNNLINELISYGIQPHVTLHHLD 143
+L+ G+ AYRFS+SWSR+IP G PVN G+++Y LI EL+ GI P VTL+H D
Sbjct: 69 QLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWD 128
Query: 144 LPQALEDEYGGWINR-MIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
LPQAL+D YGGW+N+ ++DFT YA +CF FGD V W T NEP +++GY GI
Sbjct: 129 LPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYGNGIFA 188
Query: 203 PKRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVARL----------------------- 239
P S+TEP++ HH++LAHA +L
Sbjct: 189 PGHV-----------SNTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSHWLI 237
Query: 240 ----------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGSAD 277
ANP+ G+YP +K+ G RLP FT E + +KGS+D
Sbjct: 238 PYDDTDASKEATLRAMEFKLGRFANPIYKGEYPPRIKKILGDRLPEFTPEEIELVKGSSD 297
Query: 278 FIGVINYCMIYIKDNPSS-----LKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLE 332
F G+ Y ++D S +K H AD + + D + +L
Sbjct: 298 FFGLNTYTTHLVQDGGSDELAGFVKTGHT--RADGTQLG-TQSDMGWLQTYGPGFRWLLN 354
Query: 333 YFKRVYGNPPIYVHENGLAT------PRHSSLEDISRVKYLHAYIGSVLDAV-RNGSNTR 385
Y + Y + P+YV ENG P +++D R Y Y ++L AV +G++ R
Sbjct: 355 YLWKAY-DKPVYVTENGFPVKGENDLPVEQAVDDTDRQAYYRDYTEALLQAVTEDGADVR 413
Query: 386 GYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
GYF WS LD FE +GY +G+ +VD + KR PK SA + S++ K
Sbjct: 414 GYFGWSLLDNFEWAEGYKVRFGVTHVDYETQ--KRTPKKSAEFLSRWFK 460
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 281 bits (720), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 240/482 (49%), Gaps = 84/482 (17%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH-----AGNVPGTGDVACDEYHKYKE 83
F FIFG +SAYQ+EG GR +IWD F H +G G GD CD + +++
Sbjct: 25 FEADFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPDKSGPDHGNGDTTCDSFSYWQK 81
Query: 84 DVKLMADTGLDAYRFSISWSRLIPNGRGP--VNPKGLQYYNNLINELISYGIQPHVTLHH 141
D+ ++ + YRFSI+WSR+IP G+ VN KG+ YY+ LI+ LI GI P VTL H
Sbjct: 82 DIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGLIDGLIKKGITPFVTLFH 141
Query: 142 LDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA 201
DLPQ L+DEY G+++ I+ DF YAD+CF EFGD V YW T+N+ GY +
Sbjct: 142 WDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALD 201
Query: 202 PPKRCSPPLN-NCSRGNSSTEPYMAVHHLLLAHASVARL--------------------- 239
P RCSP ++ +C GNSSTEPY+ HH LLAHA V L
Sbjct: 202 APGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTHQGGKIGPTMITRWF 261
Query: 240 ------------------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGS 275
PL G YP+ M G+RLP F+ E+ +KGS
Sbjct: 262 LPYNDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDTVGARLPTFSPEETNLVKGS 321
Query: 276 ADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMA------------FFEQDTAASSNE 323
DF+G+ Y Y + +P+ + + D FE D S+
Sbjct: 322 YDFLGLNYYFTQYAQPSPNPVNATNHTAMMDAGAKLTYINASGHYIGPLFESDGGDGSSN 381
Query: 324 ----PSSLQIVLEYFKRVYGNPPIYVHENGLATP----RHSSLEDISRVKYLHAYIGSVL 375
P + V++YFK Y NP IYV ENG++TP R S+ D +R+ YL +++ +
Sbjct: 382 IYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGSENRKESMLDYTRIDYLCSHLCFLN 441
Query: 376 DAVRNGS-NTRGYFVWSFLDVFELLDGYASSYGLYYVDRD---DPDLKRYPKLSALWYSQ 431
++ N +GY W+ D +E +G+ +GL Y++ + D DLK+ S WY +
Sbjct: 442 KVIKEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYINWNNVTDRDLKK----SGQWYQK 497
Query: 432 FL 433
F+
Sbjct: 498 FI 499
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 238/475 (50%), Gaps = 84/475 (17%)
Query: 36 GSGTSAYQVEGAANEDGRTPSIWDTFAH-----AGNVPGTGDVACDEYHKYKEDVKLMAD 90
G +SAYQ+EG GR +IWD F H +G G GD CD + +++D+ ++ +
Sbjct: 32 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 88
Query: 91 TGLDAYRFSISWSRLIPNGRGP--VNPKGLQYYNNLINELISYGIQPHVTLHHLDLPQAL 148
YRFSI+WSR+IP G+ VN KG+ YY+ LI+ LI GI P VTL H DLPQ L
Sbjct: 89 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 148
Query: 149 EDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRCSP 208
+DEY G+++ I+ DF YAD+CF EFGD V YW T+N+ GY + P RCSP
Sbjct: 149 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 208
Query: 209 PLN-NCSRGNSSTEPYMAVHHLLLAHASVARL---------------------------- 239
++ +C GNSSTEPY+ HH LLAHA V L
Sbjct: 209 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTHQGGKIGPTMITRWFLPYNDTD 268
Query: 240 -----------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGSADFIGVI 282
PL G YP+ M G RLP+F+ ES +KGS DF+G+
Sbjct: 269 RHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGLN 328
Query: 283 NYCMIYIKDNPSSLKQEHRDWSADTATMA------------FFEQDTAASSNE----PSS 326
Y Y + +P+ + + D FE+D A S++ P
Sbjct: 329 YYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYYPKG 388
Query: 327 LQIVLEYFKRVYGNPPIYVHENGLATP----RHSSLEDISRVKYLHAYIGSVLDAVRNGS 382
+ V++YFK Y NP IYV ENG++TP R+ S+ D +R+ YL +++ + ++
Sbjct: 389 IYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVIKEKD 448
Query: 383 -NTRGYFVWSFLDVFELLDGYASSYGLYYVDRD---DPDLKRYPKLSALWYSQFL 433
N +GY W+ D +E G+ +GL Y+D + D DLK+ S WY F+
Sbjct: 449 VNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKK----SGQWYQSFI 499
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 238/475 (50%), Gaps = 84/475 (17%)
Query: 36 GSGTSAYQVEGAANEDGRTPSIWDTFAH-----AGNVPGTGDVACDEYHKYKEDVKLMAD 90
G +SAYQ+EG GR +IWD F H +G G GD CD + +++D+ ++ +
Sbjct: 30 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 86
Query: 91 TGLDAYRFSISWSRLIPNGRGP--VNPKGLQYYNNLINELISYGIQPHVTLHHLDLPQAL 148
YRFSI+WSR+IP G+ VN KG+ YY+ LI+ LI GI P VTL H DLPQ L
Sbjct: 87 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 146
Query: 149 EDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRCSP 208
+DEY G+++ I+ DF YAD+CF EFGD V YW T+N+ GY + P RCSP
Sbjct: 147 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 206
Query: 209 PLN-NCSRGNSSTEPYMAVHHLLLAHASVARL---------------------------- 239
++ +C GNSSTEPY+ HH LLAHA V L
Sbjct: 207 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTHQGGKIGPTMITRWFLPYNDTD 266
Query: 240 -----------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGSADFIGVI 282
PL G YP+ M G RLP+F+ ES +KGS DF+G+
Sbjct: 267 RHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGLN 326
Query: 283 NYCMIYIKDNPSSLKQEHRDWSADTATMA------------FFEQDTAASSNE----PSS 326
Y Y + +P+ + + D FE+D A S++ P
Sbjct: 327 YYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYYPKG 386
Query: 327 LQIVLEYFKRVYGNPPIYVHENGLATP----RHSSLEDISRVKYLHAYIGSVLDAVRNGS 382
+ V++YFK Y NP IYV ENG++TP R+ S+ D +R+ YL +++ + ++
Sbjct: 387 IYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVIKEKD 446
Query: 383 -NTRGYFVWSFLDVFELLDGYASSYGLYYVDRD---DPDLKRYPKLSALWYSQFL 433
N +GY W+ D +E G+ +GL Y+D + D DLK+ S WY F+
Sbjct: 447 VNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKK----SGQWYQTFI 497
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 277 bits (709), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 172/463 (37%), Positives = 236/463 (50%), Gaps = 71/463 (15%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPG--TGDVACDEYHKYKEDV 85
FP GF++G T++YQ+EG+ DG SIW TF+H GNV TGDVACD Y+++KED+
Sbjct: 13 FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYNRWKEDI 72
Query: 86 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLP 145
+++ G+ AYRFSISW R++P G G VN KGL +YN +I+ L+ GI P VT+ H DLP
Sbjct: 73 EIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIFHWDLP 132
Query: 146 QALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKR 205
AL+ + GG +NR I F Y+ V F FGDRV W T NEP A+ GY G P R
Sbjct: 133 FALQLK-GGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEPLCSAIPGYGSGTFAPGR 191
Query: 206 CSPPLNNCSRGNSSTEPYMAVHHLLLAHASVARL-------------------------- 239
S++EP+ H++L+AH ++
Sbjct: 192 -----------QSTSEPWTVGHNILVAHGRAVKVFRETVKDGKIGIVLNGDFTYPWDAAD 240
Query: 240 -----------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGSADFIGVI 282
A+P+ GDYP +M++ G RLP FT E + GS DF G+
Sbjct: 241 PADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYGMN 300
Query: 283 NYCMIYIKDNPSSLKQEHRDWSADT----ATMAFFEQDTAASSNEP--SSLQIVLEYFKR 336
+Y YI+ S + + D +TA P + + L + +
Sbjct: 301 HYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETAMPWLRPCAAGFRDFLVWISK 360
Query: 337 VYGNPPIYVHENGLA----TPRHSSLEDISRVKYLHAYIGSVLDAVR-NGSNTRGYFVWS 391
YG PPIYV ENG A + D +R+ YL AYIG+++ AV +G N +GYFVWS
Sbjct: 361 RYGYPPIYVTENGAAFDDVVSEDGRVHDQNRIDYLKAYIGAMVTAVELDGVNVKGYFVWS 420
Query: 392 FLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
LD FE +GY+ +G+ YVD KR K S WYS +K
Sbjct: 421 LLDNFEWAEGYSKRFGIVYVDYSTQ--KRIVKDSGYWYSNVVK 461
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 241/482 (50%), Gaps = 87/482 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN----VPGTGDVACDEYHKYKED 84
FP GF + + T+AYQVEG + DG+ P +WDTF H G TGDVAC Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHLD 143
+K + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ G+ P VTL+H D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 144 LPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPP 203
LPQ LED+ GGW++ I++ F YA CF FGDRV W T+NE N +++ YD G+ PP
Sbjct: 123 LPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPP 181
Query: 204 KRCSPPLNNCSRGNSSTEPYMAVHHLLLAHA-------SVAR------------------ 238
+ T Y A H+L+ AHA S+ R
Sbjct: 182 ----------GIPHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEP 231
Query: 239 ---------------------LVANPL-VYGDYPK-------TMKQNAG---SRLPAFTD 266
L A P+ + GDYP+ +M Q G SRLP FT+
Sbjct: 232 ADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTE 291
Query: 267 RESQQIKGSADFIGVINYCMIYIKDNPSSLKQEHRDWS---ADTATMAFFEQDTAASSN- 322
E + IKG+ADF V Y IK QE++ A + FF + + +
Sbjct: 292 EEKKMIKGTADFFAVQYYTTRLIK------YQENKKGELGILQDAEIEFFPDPSWKNVDW 345
Query: 323 ---EPSSLQIVLEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYLHAYIGSVLDAVR 379
P + +L+Y K Y NP IY+ ENG + L+D R +Y + A++
Sbjct: 346 IYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYFRQTFQELFKAIQ 405
Query: 380 -NGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRSV 438
+ N + Y WS LD FE GY+S +GL++VD +DP R P SA Y++ ++ +
Sbjct: 406 LDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGL 465
Query: 439 RS 440
+
Sbjct: 466 EA 467
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 241/482 (50%), Gaps = 87/482 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN----VPGTGDVACDEYHKYKED 84
FP GF + + T+AYQVEG + DG+ P +WDTF H G TGDVAC Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHLD 143
+K + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ G+ P VTL+H D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 144 LPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPP 203
LPQ LED+ GGW++ I++ F YA CF FGDRV W T+NE N +++ YD G+ PP
Sbjct: 123 LPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPP 181
Query: 204 KRCSPPLNNCSRGNSSTEPYMAVHHLLLAHA-------SVAR------------------ 238
+ T Y A H+L+ AHA S+ R
Sbjct: 182 ----------GIPHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEP 231
Query: 239 ---------------------LVANPL-VYGDYPK-------TMKQNAG---SRLPAFTD 266
L A P+ + GDYP+ +M Q G SRLP FT+
Sbjct: 232 ADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTE 291
Query: 267 RESQQIKGSADFIGVINYCMIYIKDNPSSLKQEHRDWS---ADTATMAFFEQDTAASSN- 322
E + IKG+ADF V Y IK QE++ A + FF + + +
Sbjct: 292 EEKKMIKGTADFFAVQYYTTRLIK------YQENKKGELGILQDAEIEFFPDPSWINVDW 345
Query: 323 ---EPSSLQIVLEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYLHAYIGSVLDAVR 379
P + +L+Y K Y NP IY+ ENG + L+D R +Y + A++
Sbjct: 346 IYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYFRQTFQELFKAIQ 405
Query: 380 -NGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRSV 438
+ N + Y WS LD FE GY+S +GL++VD +DP R P SA Y++ ++ +
Sbjct: 406 LDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGL 465
Query: 439 RS 440
+
Sbjct: 466 EA 467
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/482 (35%), Positives = 241/482 (50%), Gaps = 87/482 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN----VPGTGDVACDEYHKYKED 84
FP GF + + T+AYQVEG + DG+ P +WDTF H G TGDVAC Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHLD 143
+K + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ G+ P VTL+H D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 144 LPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPP 203
LPQ LED+ GGW++ I++ F YA CF FGDRV W T+N+ N +++ YD G+ PP
Sbjct: 123 LPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINQANVLSVMSYDLGMFPP 181
Query: 204 KRCSPPLNNCSRGNSSTEPYMAVHHLLLAHA-------SVAR------------------ 238
+ T Y A H+L+ AHA S+ R
Sbjct: 182 ----------GIPHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEP 231
Query: 239 ---------------------LVANPL-VYGDYPK-------TMKQNAG---SRLPAFTD 266
L A P+ + GDYP+ +M Q G SRLP FT+
Sbjct: 232 ADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTE 291
Query: 267 RESQQIKGSADFIGVINYCMIYIKDNPSSLKQEHRDWS---ADTATMAFFEQDTAASSN- 322
E + IKG+ADF V Y IK QE++ A + FF + + +
Sbjct: 292 EEKKMIKGTADFFAVQYYTTRLIK------YQENKKGELGILQDAEIEFFPDPSWKNVDW 345
Query: 323 ---EPSSLQIVLEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYLHAYIGSVLDAVR 379
P + +L+Y K Y NP IY+ ENG + L+D R +Y + A++
Sbjct: 346 IYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYFRQTFQELFKAIQ 405
Query: 380 -NGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRSV 438
+ N + Y WS LD FE GY+S +GL++VD +DP R P SA Y++ ++ +
Sbjct: 406 LDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGL 465
Query: 439 RS 440
+
Sbjct: 466 EA 467
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 261 bits (667), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 231/460 (50%), Gaps = 79/460 (17%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPG--TGDVACDEYHKYKEDV 85
FP GF++G T++YQ+EG+ DG SIW TF+H GNV TGDVACD Y+++KED+
Sbjct: 28 FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYNRWKEDI 87
Query: 86 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLP 145
+++ G+ AYRFSISW R++P G G VN KGL +YN +I+ L+ GI P VT++H DLP
Sbjct: 88 EIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLP 147
Query: 146 QALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKR 205
AL+ + GGW NR I F Y+ V F FGDRV W T+NEP A+VG+ +G+ P
Sbjct: 148 FALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAPGM 206
Query: 206 CSPPLNNCSRGNSSTEPYMAVHHLLLAHASVAR--------------------------- 238
+ + AVH+LL AHA +
Sbjct: 207 RDIYV-----------AFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKE 255
Query: 239 ----------------LVANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGSADFIGVI 282
L NP+ GDYP+ + + A LP + +I+ DF+G+
Sbjct: 256 EDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQEKIDFVGLN 315
Query: 283 NYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNE----PSSLQIVLEYFKRVY 338
Y +K +P + A ++F E+D ++ P + +L+ K Y
Sbjct: 316 YYSGHLVKFDPDA-----------PAKVSFVERDLPKTAMGWEIVPEGIYWILKKVKEEY 364
Query: 339 GNPPIYVHENGLA----TPRHSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLD 394
P +Y+ ENG A + D +R+ YL A+IG A++ G +GYFVWS LD
Sbjct: 365 NPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLD 424
Query: 395 VFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
FE +GY+ +G+ YVD KR K S WYS +K
Sbjct: 425 NFEWAEGYSKRFGIVYVDYSTQ--KRIVKDSGYWYSNVVK 462
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 239/481 (49%), Gaps = 90/481 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN---VPG-TGDVACDEYHKYKED 84
FP F G+ T++YQ+EGA +E+G+ P+IWDT H V G TGD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHLD 143
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 144 LPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPP 203
LPQAL+D GGW N ++ K YA V F+ FGDRV W T NEP F M GY I
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEPLTF-MDGYASEIG-- 187
Query: 204 KRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVAR------------------------- 238
+P +N G+ Y+A H ++ AHA +
Sbjct: 188 --MAPSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEP 240
Query: 239 --------------------LVANPLVY--GDYPKTMKQNAG----------SRLPAFTD 266
L A+P+ GDYP +K SRLP FT
Sbjct: 241 ATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTA 300
Query: 267 RESQQIKGSADFIGVINYCMIYIKDNPSSLK-QEHRDWSADTATMAFFEQDTAASSNEPS 325
E + I+G+ DF+G+ Y + K + +RD + QD A + S
Sbjct: 301 EEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRD------SGVILTQDAAWPISASS 354
Query: 326 SLQIV-------LEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYLHAYIGSVLDAV 378
L++V L + K Y NPP+++ ENG + + L D RV Y ++ +L A+
Sbjct: 355 WLKVVPWGFRKELNWIKNEYNNPPVFITENGFSD--YGGLNDTGRVHYYTEHLKEMLKAI 412
Query: 379 -RNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRS 437
+G N GY WS +D FE L GY+ +G+Y VD +DP R PK SA ++ + R
Sbjct: 413 HEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRK 472
Query: 438 V 438
+
Sbjct: 473 I 473
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 257 bits (657), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 239/481 (49%), Gaps = 90/481 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN---VPG-TGDVACDEYHKYKED 84
FP F G+ T++YQ+EGA +E+G+ P+IWDT H V G TGD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHLD 143
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 144 LPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPP 203
LPQAL+D GGW N ++ K YA V F+ FGDRV W T N+P F M GY I
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNDPLTF-MDGYASEIG-- 187
Query: 204 KRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVAR------------------------- 238
+P +N G+ Y+A H ++ AHA +
Sbjct: 188 --MAPSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEP 240
Query: 239 --------------------LVANPLVY--GDYPKTMKQNAG----------SRLPAFTD 266
L A+P+ GDYP +K SRLP FT
Sbjct: 241 ATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTA 300
Query: 267 RESQQIKGSADFIGVINYCMIYIKDNPSSLK-QEHRDWSADTATMAFFEQDTAASSNEPS 325
E + I+G+ DF+G+ Y + K + +RD + QD A + S
Sbjct: 301 EEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRD------SGVILTQDAAWPISASS 354
Query: 326 SLQIV-------LEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYLHAYIGSVLDAV 378
L++V L + K Y NPP+++ ENG + + L D RV Y ++ +L A+
Sbjct: 355 WLKVVPWGFRKELNWIKNEYNNPPVFITENGFSD--YGGLNDTGRVHYYTEHLKEMLKAI 412
Query: 379 -RNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRS 437
+G N GY WS +D FE L GY+ +G+Y VD +DP R PK SA ++ + R
Sbjct: 413 HEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRK 472
Query: 438 V 438
+
Sbjct: 473 I 473
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 238/481 (49%), Gaps = 90/481 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN---VPG-TGDVACDEYHKYKED 84
FP F G+ T++YQ+EGA +E+G+ P+IWDT H V G TGD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHLD 143
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 144 LPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPP 203
LPQAL+D GGW N ++ K YA V F+ FGDRV W T N P F M GY I
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNSPLTF-MDGYASEIG-- 187
Query: 204 KRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVAR------------------------- 238
+P +N G+ Y+A H ++ AHA +
Sbjct: 188 --MAPSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEP 240
Query: 239 --------------------LVANPLVY--GDYPKTMKQNAG----------SRLPAFTD 266
L A+P+ GDYP +K SRLP FT
Sbjct: 241 ATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTA 300
Query: 267 RESQQIKGSADFIGVINYCMIYIKDNPSSLK-QEHRDWSADTATMAFFEQDTAASSNEPS 325
E + I+G+ DF+G+ Y + K + +RD + QD A + S
Sbjct: 301 EEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRD------SGVILTQDAAWPISASS 354
Query: 326 SLQIV-------LEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYLHAYIGSVLDAV 378
L++V L + K Y NPP+++ ENG + + L D RV Y ++ +L A+
Sbjct: 355 WLKVVPWGFRKELNWIKNEYNNPPVFITENGFSD--YGGLNDTGRVHYYTEHLKEMLKAI 412
Query: 379 -RNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRS 437
+G N GY WS +D FE L GY+ +G+Y VD +DP R PK SA ++ + R
Sbjct: 413 HEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRK 472
Query: 438 V 438
+
Sbjct: 473 I 473
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 238/481 (49%), Gaps = 90/481 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN---VPG-TGDVACDEYHKYKED 84
FP F G+ T++YQ+EGA +E+G+ P+IWDT H V G TGD+A D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 85 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNNLINELISYGIQPHVTLHHLD 143
VK++ + G YRFSISW+R++P G VN G+ YYNNLINEL++ GI+P VT++H D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 144 LPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPP 203
LPQAL+D GGW N ++ K YA V F+ FGDRV W T N P F M GY I
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNAPLTF-MDGYASEIG-- 187
Query: 204 KRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVAR------------------------- 238
+P +N G+ Y+A H ++ AHA +
Sbjct: 188 --MAPSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEP 240
Query: 239 --------------------LVANPLVY--GDYPKTMKQNAG----------SRLPAFTD 266
L A+P+ GDYP +K SRLP FT
Sbjct: 241 ATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTA 300
Query: 267 RESQQIKGSADFIGVINYCMIYIKDNPSSLK-QEHRDWSADTATMAFFEQDTAASSNEPS 325
E + I+G+ DF+G+ Y + K + +RD + QD A + S
Sbjct: 301 EEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRD------SGVILTQDAAWPISASS 354
Query: 326 SLQIV-------LEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYLHAYIGSVLDAV 378
L++V L + K Y NPP+++ ENG + + L D RV Y ++ +L A+
Sbjct: 355 WLKVVPWGFRKELNWIKNEYNNPPVFITENGFSD--YGGLNDTGRVHYYTEHLKEMLKAI 412
Query: 379 -RNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRS 437
+G N GY WS +D FE L GY+ +G+Y VD +DP R PK SA ++ + R
Sbjct: 413 HEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRK 472
Query: 438 V 438
+
Sbjct: 473 I 473
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 232/463 (50%), Gaps = 65/463 (14%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYK 82
FP GF++GS T++YQ+EGAA EDGRTPSIWDT+A PG TGDVA D YH+++
Sbjct: 18 FPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYA---RTPGRVRNGDTGDVATDHYHRWR 74
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHL 142
EDV LMA+ GL AYRFS++W R+ P GRGP KGL +Y L +EL++ GIQP TL+H
Sbjct: 75 EDVALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHW 134
Query: 143 DLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
DLPQ LE+ GGW R + F YA + GDRV WTT+NEP A +GY G+
Sbjct: 135 DLPQELENA-GGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHA 193
Query: 203 PKRCSP-------------------PLNNCSRGNSSTEPYMAVHHLLLAHASVA------ 237
P R P L + ++ + +HH+ S A
Sbjct: 194 PGRTDPVAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHHVRPLTDSDADADAVR 253
Query: 238 -------RLVANPLVYGDYPKTM-KQNAGSRLPAFT-DRESQQIKGSADFIGVINYCMIY 288
R+ P++ G YP+ + K AG +F D + + DF+GV Y
Sbjct: 254 RIDALANRVFTGPMLQGAYPEDLVKDTAGLTDWSFVRDGDLRLAHQKLDFLGVNYYSPTL 313
Query: 289 IKDNPSS--------LKQEHRDWSADTATMAFFEQDTAASSN-----EPSSLQIVLEYFK 335
+ + S + H W A F Q ++ +PS L +L
Sbjct: 314 VSEADGSGTHNSDGHGRSAHSPWPG--ADRVAFHQPPGETTAMGWAVDPSGLYELLRRLS 371
Query: 336 RVYGNPPIYVHENGLATPRHSSLE----DISRVKYLHAYIGSVLDAVRNGSNTRGYFVWS 391
+ P+ + ENG A ++ E D R+ Y+ ++ +V A+++GS+ RGYF+WS
Sbjct: 372 SDFPALPLVITENGAAFHDYADPEGNVNDPERIAYVRDHLAAVHRAIKDGSDVRGYFLWS 431
Query: 392 FLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
LD FE GY+ +G YVD P R PK SA WY++ +
Sbjct: 432 LLDNFEWAHGYSKRFGAVYVDY--PTGTRIPKASARWYAEVAR 472
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 225/465 (48%), Gaps = 71/465 (15%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPG--TGDVACDEYHKYKEDV 85
FP FI+G+ TS+YQ+EGA NEDG+ SIWD F+H G + TGD+ACD YH Y+ED+
Sbjct: 13 FPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENGDTGDIACDHYHLYREDI 72
Query: 86 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLP 145
+LM + G+ +YRFS SW R++P G+G VN KGL +Y L++ L+ I+P +TL+H DLP
Sbjct: 73 ELMKEIGIRSYRFSTSWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLP 132
Query: 146 QALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKR 205
QAL+D+ GGW NR K F YA + F EF V W T NEP A G+ FG
Sbjct: 133 QALQDK-GGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFG------ 185
Query: 206 CSPPLNNCSRGNSSTEPYMAV-HHLLLAHASVARL------------------------- 239
N + G + + V HHLLL+H +
Sbjct: 186 ------NHAPGTKDFKTALQVAHHLLLSHGMAVDIFREEDLPGEIGITLNLTPAYPAGDS 239
Query: 240 -----------------VANPLVYGDYPKTMKQNAGSRLPAFTDRESQQ--IKGSADFIG 280
+P+ G YP+ + L AFT + I DF+G
Sbjct: 240 EKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRDIDFLG 299
Query: 281 VINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVYGN 340
+ Y + ++ P ++A+ M P L +L + Y +
Sbjct: 300 INYYSRMVVRHKPGD-----NLFNAEVVKMEDRPSTEMGWEIYPQGLYDILVRVNKEYTD 354
Query: 341 PPIYVHENGLA----TPRHSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVF 396
P+Y+ ENG A + D R+ YL + A+++G RGY+VWS +D F
Sbjct: 355 KPLYITENGAAFDDKLTEEGKIHDEKRINYLGDHFKQAYKALKDGVPLRGYYVWSLMDNF 414
Query: 397 ELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRSVRSD 441
E GY+ +GL YVD ++ + +R+ K SALWY + ++ V ++
Sbjct: 415 EWAYGYSKRFGLIYVDYENGN-RRFLKDSALWYREVIEKGQVEAN 458
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 226/458 (49%), Gaps = 74/458 (16%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPG--TGDVACDEYHKYKEDV 85
FP FIFG+ T+AYQ+EGA ED + SIWD F+H GNV GD+ACD YH+YKEDV
Sbjct: 6 FPKDFIFGTATAAYQIEGAYKEDEKGESIWDRFSHIPGNVAKMHNGDIACDHYHRYKEDV 65
Query: 86 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLP 145
+L+ G+ +YRFSI+W R+ P G G +N KG+Q+Y +LI+ELI I+P +T++H DLP
Sbjct: 66 QLLKSLGIKSYRFSIAWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLP 125
Query: 146 QALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPK- 204
Q L+D GGW N + + YA++ FREFGDRV W T NEP + +GY G+ P
Sbjct: 126 QKLQD-IGGWANPQVADYYVDYANLLFREFGDRVKTWITHNEPWVASYLGYALGVHAPGI 184
Query: 205 ---------------------------------RCSPPLNNCSRGNSSTEPYMAVHHLLL 231
+ L+ C ++ E A H
Sbjct: 185 KDMKMALLAAHNILLSHFKAVKAYRELEQDGQIGITLNLSTCYSNSADEEDIAAAHR--- 241
Query: 232 AHASVARLVANPLVYGDYPKTMKQ--NAGSRLPAFTDRESQQIKGSADFIGVINYCMIYI 289
+ R + + G YP+ M + + + +P ++ ++DF+G+ Y +
Sbjct: 242 SDGWNNRWFLDAALKGTYPEDMIKIFSDTNIMPELPKELFTEVFETSDFLGINYYTRQVV 301
Query: 290 KDNPSSLKQEHRDWSADTATMAFFEQDTAASSNE---------PSSLQIVLEYFKRVYGN 340
K+N AF ++ A N P L +L R YGN
Sbjct: 302 KNNSE----------------AFIGAESVAMDNPKTEMGWEIYPQGLYDLLTRIHRDYGN 345
Query: 341 PPIYVHENGLA----TPRHSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVF 396
+Y+ ENG A R +ED +R+ YL+ + + L A+ G +GY++WSF+D F
Sbjct: 346 IDLYITENGAAFNDMVNRDGKVEDENRLDYLYTHFAAALSAIEAGVPLKGYYIWSFMDNF 405
Query: 397 ELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLK 434
E +GY +G+ +V+ + R K SA WY + ++
Sbjct: 406 EWAEGYEKRFGIVHVNYKTQE--RTIKKSAYWYKELIE 441
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 223/455 (49%), Gaps = 73/455 (16%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPG--TGDVACDEYHKYKEDV 85
FP F +G T+AYQ+EGA NEDGR SIWDTFAH G V G+VACD YH+ +EDV
Sbjct: 5 FPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHTPGKVKNGDNGNVACDSYHRVEEDV 64
Query: 86 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLP 145
+L+ D G+ YRFSISW R++P G G VN GL YY+ L++EL++ GI+P TL+H DLP
Sbjct: 65 QLLKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLP 124
Query: 146 QALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKR 205
QAL+D+ GGW +R+ + F YA++ F+E G ++ W T NEP A + G+ P
Sbjct: 125 QALQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAP-- 181
Query: 206 CSPPLNNCSRGNSSTEPYMAV-HHLLLAHASVARLV------------------------ 240
GN + + V HHLL+AH L
Sbjct: 182 ----------GNKDLQLAIDVSHHLLVAHGRAVTLFRELGISGEIGIAPNTSWAVPYRRT 231
Query: 241 ------------------ANPLVYGDYPKTMK---QNAGSRLPAFTDRESQQIKGSADFI 279
+P+ +G+YPK M +N G + P D + + I DFI
Sbjct: 232 KEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYK-PPIVDGDMELIHQPIDFI 290
Query: 280 GVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVYG 339
G+ Y + NP S++ +M + D L +L Y YG
Sbjct: 291 GINYYTSSMNRYNPGEAGGML---SSEAISMGAPKTDIGWEIY-AEGLYDLLRYTADKYG 346
Query: 340 NPPIYVHENGLATPRHSSLE----DISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDV 395
NP +Y+ ENG SL+ D R+ YL ++ A+ +G N +GY WS +D
Sbjct: 347 NPTLYITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWSLMDN 406
Query: 396 FELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYS 430
FE +GY +GL +VD D L R PK S WY
Sbjct: 407 FEWAEGYGMRFGLVHVDYD--TLVRTPKDSFYWYK 439
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 248 bits (632), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 224/464 (48%), Gaps = 79/464 (17%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTF-AHAGNVP--GTGDVACDEYHKYKEDV 85
P F +G T+AYQ+EGA ++DGR PSIWDTF A G + +G ACD Y++ ED+
Sbjct: 9 LPKDFQWGFATAAYQIEGAVDQDGRGPSIWDTFCAQPGKIADGSSGVTACDSYNRTAEDI 68
Query: 86 KLMADTGLDAYRFSISWSRLIPN-GRG-PVNPKGLQYYNNLINELISYGIQPHVTLHHLD 143
L+ G +YRFSISWSR+IP GRG VN G+ +Y +++L+ GI P +TL H D
Sbjct: 69 ALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWD 128
Query: 144 LPQALEDEYGGWINRM-IVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
LP+ L YGG +NR DF YA V FR +V W T NEP A+ GY G
Sbjct: 129 LPEGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVRNWITFNEPLCSAIPGYGSGTFA 187
Query: 203 PKRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVAR------------------------ 238
P R S++EP+ H++L+AH +
Sbjct: 188 PGR-----------QSTSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFT 236
Query: 239 -----------------------LVANPLVYGDYPKTMKQNAGSRLPAFTDRESQQIKGS 275
A+P+ GDYP +M++ G RLP FT E + GS
Sbjct: 237 YPWDAADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGS 296
Query: 276 ADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNEP------SSLQI 329
DF G+ +Y YI+ S + + D + P + +
Sbjct: 297 NDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLRPCAAGFRD 356
Query: 330 VLEYFKRVYGNPPIYVHENGLAT------PRHSSLEDISRVKYLHAYIGSVLDAVR-NGS 382
L + + YG PPIYV ENG + P+ LED RVKY + YI +++ AV +G
Sbjct: 357 FLVWISKRYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYYNEYIRAMVTAVELDGV 416
Query: 383 NTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSA 426
N +GYF WS +D FE DGY + +G+ YVD ++ KR+PK SA
Sbjct: 417 NVKGYFAWSLMDNFEWADGYVTRFGVTYVDYENGQ-KRFPKKSA 459
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 223/469 (47%), Gaps = 78/469 (16%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN---VPGT-GDVACDEYHKYKED 84
FP F+FG+ T++YQ+EG NEDG+ +IWD H GT GD+ACD YHKYKED
Sbjct: 5 FPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYKED 64
Query: 85 VKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQPHVTLHHLD 143
V ++ D L YRFSISW+R+ P+G + PKG+ YYNNLINELI I P VT++H D
Sbjct: 65 VAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWD 124
Query: 144 LPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPP 203
LPQ L+D GGW+N ++ F YA V F FGDRV +W T NEP GY
Sbjct: 125 LPQYLQD-LGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEPIAVCK-GYSI----- 177
Query: 204 KRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVARL------------------------ 239
K +P LN + G+ Y+A H L+AH RL
Sbjct: 178 KAYAPNLNLKTTGH-----YLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMP 232
Query: 240 ----------------------VANPLVYGDYPKTMKQNAG----------SRLPAFTDR 267
+P+ GDYP MK+ S+LP FT
Sbjct: 233 KNAESDDDIETAERANQFERGWFGHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPKFTKD 292
Query: 268 ESQQIKGSADFIGVINYC--MIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNEPS 325
E + +KG+ADF + +Y ++ +P+ + +T P
Sbjct: 293 EIKLLKGTADFYALNHYSSRLVTFGSDPNPNFNPDASYVTSVDEAWLKPNETPYIIPVPE 352
Query: 326 SLQIVLEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYLHAYIGSVLDAV-RNGSNT 384
L+ +L + K YGNP + + ENG L+D ++ YL Y+ + L A+ + N
Sbjct: 353 GLRKLLIWLKNEYGNPQLLITENGYGD--DGQLDDFEKISYLKNYLNATLQAMYEDKCNV 410
Query: 385 RGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFL 433
GY VWS LD FE GY+ +GL +D +DP R + S ++ +
Sbjct: 411 IGYTVWSLLDNFEWFYGYSIHFGLVKIDFNDPQRTRTKRESYTYFKNVV 459
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 241 bits (614), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 221/446 (49%), Gaps = 76/446 (17%)
Query: 33 FIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYKEDVK 86
F++G TSAYQ+EGA EDGR PSIWDTFA PG TG+ ACD YH+Y+ED+
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDTFARR---PGAIRDGSTGEPACDHYHRYEEDIA 64
Query: 87 LMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLPQ 146
LM G+ YRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H DLPQ
Sbjct: 65 LMQSLGVGVYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQ 124
Query: 147 ALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRC 206
ALED GGW +R F YA+ R DRV ++ T+NEP A +G+ G
Sbjct: 125 ALEDR-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTG-----EH 178
Query: 207 SPPLNNCSRGNSSTEPYMAVHHLLLAH--------ASVARLVA----------------- 241
+P L N A HHLLL H A+ AR V
Sbjct: 179 APGLRNLEAA------LRAAHHLLLGHGLAVEALRAAGARRVGIVLNFAPAYGEDPEAVD 232
Query: 242 -----------NPLVYGDYPKTMKQNAGSRLPA-FTDRESQQIKGSADFIGVINYCMIYI 289
+P++ YP++ Q+ PA R+ + I DF+GV Y + +
Sbjct: 233 VADRYHNRYFLDPILGRGYPESPFQDPP---PAPILSRDLEAIARPLDFLGVNYYAPVRV 289
Query: 290 KDNPSSLKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVYGNPPIYVHENG 349
L + M + P L +L+ R P+Y+ ENG
Sbjct: 290 APGTGPLPVRYLPPEGPVTAMGW--------EVYPEGLYHLLKRLGREVPW-PLYITENG 340
Query: 350 LATPR----HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASS 405
A P + +ED RV YL A++ + L A G + RGYFVWS +D FE GY
Sbjct: 341 AAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRR 400
Query: 406 YGLYYVDRDDPDLKRYPKLSALWYSQ 431
+GLYYV D P +R PK SALWY +
Sbjct: 401 FGLYYV--DFPSQRRIPKRSALWYRE 424
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 222/457 (48%), Gaps = 73/457 (15%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPG--TGDVACDEYHKYKEDV 85
FP F++G+ TS+YQ+EG +E GRTPSIWDTF G V G GDVACD +H +KEDV
Sbjct: 12 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 71
Query: 86 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLP 145
+LM G YRFS++W R++P G +N +GL +Y +L++E+ G+ P +TL+H DLP
Sbjct: 72 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 130
Query: 146 QALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKR 205
Q +EDE GGW R ++ F YA V FG+R+++W T+NEP +++GY G P
Sbjct: 131 QWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH 189
Query: 206 CSPPLNNCSRGNSSTEPYMAVHHLLLAHAS------------------------------ 235
+ E + A HH+L+ H
Sbjct: 190 -----------ENWREAFTAAHHILMCHGIASNLHKEKGLTGKIGITLNMEHVDAASERP 238
Query: 236 ------------VARLVANPLVYGDYPKTMKQNAGSRLPAF---TDRESQQIKGSADFIG 280
+ R A PL G YP+ M + G+ L + + I+ DF+G
Sbjct: 239 EDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLG 298
Query: 281 VINYCMIYIKD-NPSSLKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVYG 339
+ Y I+ N +SL Q + + T D + S +++ K
Sbjct: 299 INYYTRSIIRSTNDASLLQVEQVHMEEPVT------DMGWEIHPESFYKLLTRIEKDFSK 352
Query: 340 NPPIYVHENGLATPR---HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVF 396
PI + ENG A + +ED R +Y+ ++ + + G +GYFVWSFLD F
Sbjct: 353 GLPILITENGAAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNF 412
Query: 397 ELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFL 433
E GY+ +G+ +++ + + R PK SALW+ Q +
Sbjct: 413 EWAWGYSKRFGIVHINYETQE--RTPKQSALWFKQMM 447
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 222/457 (48%), Gaps = 73/457 (15%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPG--TGDVACDEYHKYKEDV 85
FP F++G+ TS+YQ+EG +E GRTPSIWDTF G V G GDVACD +H +KEDV
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 86 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLP 145
+LM G YRFS++W R++P G +N +GL +Y +L++E+ G+ P +TL+H DLP
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 132
Query: 146 QALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKR 205
Q +EDE GGW R ++ F YA V FG+R+++W T+NEP +++GY G P
Sbjct: 133 QWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH 191
Query: 206 CSPPLNNCSRGNSSTEPYMAVHHLLLAHAS------------------------------ 235
+ E + A HH+L+ H
Sbjct: 192 -----------ENWREAFTAAHHILMCHGIASNLHKEKGLTGKIGITLNMEHVDAASERP 240
Query: 236 ------------VARLVANPLVYGDYPKTMKQNAGSRLPAF---TDRESQQIKGSADFIG 280
+ R A PL G YP+ M + G+ L + + I+ DF+G
Sbjct: 241 EDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLG 300
Query: 281 VINYCMIYIKD-NPSSLKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVYG 339
+ Y I+ N +SL Q + + T D + S +++ K
Sbjct: 301 INYYTRSIIRSTNDASLLQVEQVHMEEPVT------DMGWEIHPESFYKLLTRIEKDFSK 354
Query: 340 NPPIYVHENGLATPR---HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVF 396
PI + ENG A + +ED R +Y+ ++ + + G +GYFVWSFLD F
Sbjct: 355 GLPILITENGAAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNF 414
Query: 397 ELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFL 433
E GY+ +G+ +++ + + R PK SALW+ Q +
Sbjct: 415 EWAWGYSKRFGIVHINYETQE--RTPKQSALWFKQMM 449
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 221/457 (48%), Gaps = 73/457 (15%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHA-GNVPG--TGDVACDEYHKYKEDV 85
FP F++G+ TS+YQ+EG +E GRTPSIWDTF G V G GDVACD +H +KEDV
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 86 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLP 145
+LM G YRFS++W R++P G +N +GL +Y +L++E+ G+ P +TL+H DLP
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 132
Query: 146 QALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKR 205
Q +EDE GGW R ++ F YA V FG+R+++W T+NEP +++GY G P
Sbjct: 133 QWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH 191
Query: 206 CSPPLNNCSRGNSSTEPYMAVHHLLLAHAS------------------------------ 235
+ E + A HH+L+ H
Sbjct: 192 -----------ENWREAFTAAHHILMCHGIASNLHKEKGLTGKIGITLNMEHVDAASERP 240
Query: 236 ------------VARLVANPLVYGDYPKTMKQNAGSRLPAF---TDRESQQIKGSADFIG 280
+ R A PL G YP+ M + G+ L + + I+ DF+G
Sbjct: 241 EDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLG 300
Query: 281 VINYCMIYIKD-NPSSLKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVYG 339
+ Y I+ N +SL Q + + T D + S +++ K
Sbjct: 301 INYYTRSIIRSTNDASLLQVEQVHMEEPVT------DMGWEIHPESFYKLLTRIEKDFSK 354
Query: 340 NPPIYVHENGLATPR---HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVF 396
PI + ENG A + +ED R Y+ ++ + + G +GYFVWSFLD F
Sbjct: 355 GLPILITENGAAMRDELVNGQIEDTGRHGYIEEHLKACHRFIEEGGQLKGYFVWSFLDNF 414
Query: 397 ELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFL 433
E GY+ +G+ +++ + + R PK SALW+ Q +
Sbjct: 415 EWAWGYSKRFGIVHINYETQE--RTPKQSALWFKQMM 449
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 234 bits (597), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 223/458 (48%), Gaps = 85/458 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYK 82
FP F++G+ T+AYQ+EGA EDGR SIWDTFAH PG G+VACD YH+Y+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT---PGKVFNGDNGNVACDSYHRYE 61
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHL 142
ED++LM + G+ YRFS+SW R+ PNG G VN KGL YY+ +++ L GI+P TL+H
Sbjct: 62 EDIRLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHW 121
Query: 143 DLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
DLPQAL+D GGW NR ++ F +A+ FREF ++ +W T NEP A + G+
Sbjct: 122 DLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHA 180
Query: 203 PKRCSPPLNNCSRGNSSTEPYMAV-HHLLLAH---------------------------- 233
P G ++ + + V HHLL+AH
Sbjct: 181 P------------GLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWAVPY 228
Query: 234 -------ASVARLVA-------NPLVYGDYPKTMKQ---NAGSRLPAFTDRESQQIKGSA 276
A+ AR ++ P+ G YP+ + G+ +P D + I
Sbjct: 229 STSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPI 287
Query: 277 DFIGVINYCMIYIKDNPSS--LKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYF 334
D IG+ Y M + NP + L+ E + + + E L VL Y
Sbjct: 288 DMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGW--------PVESRGLYEVLHYL 339
Query: 335 KRVYGNPPIYVHENGLATPR---HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWS 391
++ YGN IY+ ENG + ++D R+ Y+ ++ V + +G + +GY WS
Sbjct: 340 QK-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWS 398
Query: 392 FLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWY 429
LD FE +GY +G+ +VD R PK S WY
Sbjct: 399 LLDNFEWAEGYNMRFGMIHVDFRTQ--VRTPKQSYYWY 434
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 234 bits (596), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 224/458 (48%), Gaps = 85/458 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYK 82
FP F++G+ T+AYQ+EGA EDGR SIWDTFAH PG G+VACD YH+Y+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT---PGKVFNGDNGNVACDSYHRYE 61
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHL 142
ED++LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L GI+P TL+H
Sbjct: 62 EDIRLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHW 121
Query: 143 DLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
DLPQAL+D GGW NR ++ F +A+ FREF ++ +W T NEP A + G+
Sbjct: 122 DLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHA 180
Query: 203 PKRCSPPLNNCSRGNSSTEPYMAV-HHLLLAH---------------------------- 233
P G ++ + + V HHLL+AH
Sbjct: 181 P------------GLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWAVPY 228
Query: 234 -------ASVARLVA-------NPLVYGDYPKTMKQ---NAGSRLPAFTDRESQQIKGSA 276
A+ AR ++ P+ G YP+ + G+ +P D + I
Sbjct: 229 STSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPI 287
Query: 277 DFIGVINYCMIYIKDNPSS--LKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYF 334
D IG+ Y M + NP + L+ E + + + E L VL Y
Sbjct: 288 DMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGW--------PVESRGLYEVLHYL 339
Query: 335 KRVYGNPPIYVHENGLATPR---HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWS 391
++ YGN IY+ ENG + ++D R+ Y+ ++ V A+ +G + +GY WS
Sbjct: 340 QK-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRAIHDGLHVKGYMAWS 398
Query: 392 FLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWY 429
LD FE +GY +G+ +VD R PK S WY
Sbjct: 399 LLDNFEWAEGYNMRFGMIHVDFRTQ--VRTPKQSYYWY 434
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 223/458 (48%), Gaps = 85/458 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYK 82
FP F++G+ T+AYQ+EGA EDGR SIWDTFAH PG G+VACD YH+Y+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT---PGKVFNGDNGNVACDSYHRYE 61
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHL 142
ED++LM + G+ YRFS+SW R+ PNG G VN KGL YY+ +++ L GI+P TL+H
Sbjct: 62 EDIRLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHW 121
Query: 143 DLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
DLPQAL+D GGW NR ++ F +A+ FREF ++ +W T NEP A + G+
Sbjct: 122 DLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHA 180
Query: 203 PKRCSPPLNNCSRGNSSTEPYMAV-HHLLLAH---------------------------- 233
P G ++ + + V HHLL+AH
Sbjct: 181 P------------GLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWAVPY 228
Query: 234 -------ASVARLVA-------NPLVYGDYPKTMKQ---NAGSRLPAFTDRESQQIKGSA 276
A+ AR ++ P+ G YP+ + G+ +P D + I
Sbjct: 229 STSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPI 287
Query: 277 DFIGVINYCMIYIKDNPSS--LKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYF 334
D IG+ Y M + NP + L+ E + + + E L VL Y
Sbjct: 288 DMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGW--------PVESRGLYEVLHYL 339
Query: 335 KRVYGNPPIYVHENGLATPR---HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWS 391
++ YGN IY+ ENG + ++D R+ Y+ ++ V + +G + +GY WS
Sbjct: 340 QK-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWS 398
Query: 392 FLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWY 429
LD FE +GY +G+ +VD R PK S WY
Sbjct: 399 LLDNFEWAEGYNMRFGMIHVDFRTQ--VRTPKESYYWY 434
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 218/443 (49%), Gaps = 70/443 (15%)
Query: 33 FIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYKEDVK 86
F++G TSAYQ+EGA EDGR PSIWD FA PG TG+ ACD Y +Y+ED+
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDAFAQR---PGAIRDGSTGEPACDHYRRYEEDIA 64
Query: 87 LMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLPQ 146
LM G+ AYRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H DLP
Sbjct: 65 LMQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPL 124
Query: 147 ALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRC 206
ALE E GGW +R F YA+ R DRV ++ T+NEP A +G+ G
Sbjct: 125 ALE-ERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTG-----EH 178
Query: 207 SPPLNNCSRGNSSTEPYMAVHHLLLAH--------ASVARLVANPL----VYGDYPKTMK 254
+P L N A HHLLL H A+ AR V L YG+ P+ +
Sbjct: 179 APGLRNLEAA------LRAAHHLLLGHGLAVEALRAAGARRVGIVLNFAPAYGEDPEAVD 232
Query: 255 --------------QNAGSRLPAFTD--------RESQQIKGSADFIGVINYCMIYIKDN 292
G F D R+ + + DF+GV Y + +
Sbjct: 233 VADRYHNRFFLDPILGKGYPESPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPG 292
Query: 293 PSSLKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVYGNPPIYVHENGLAT 352
+L + M + P L +L+ R P+YV ENG A
Sbjct: 293 TGTLPVRYLPPEGPATAMGW--------EVYPEGLYHLLKRLGREVPW-PLYVTENGAAY 343
Query: 353 PR----HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGL 408
P + +ED RV YL A++ + L A G + RGYFVWS +D FE GY +GL
Sbjct: 344 PDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGL 403
Query: 409 YYVDRDDPDLKRYPKLSALWYSQ 431
YYV D P +R PK SALWY +
Sbjct: 404 YYV--DFPSQRRIPKRSALWYRE 424
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 217/443 (48%), Gaps = 70/443 (15%)
Query: 33 FIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYKEDVK 86
F++G TSAYQ+EGA EDGR PSIWD FA PG TG+ ACD Y +Y+ED+
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDAFAQR---PGAIRDGSTGEPACDHYRRYEEDIA 64
Query: 87 LMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLPQ 146
LM G+ AYRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H DLP
Sbjct: 65 LMQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPL 124
Query: 147 ALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRC 206
ALE E GGW +R F YA+ R DRV ++ T+NEP A +G+ G
Sbjct: 125 ALE-ERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTG-----EH 178
Query: 207 SPPLNNCSRGNSSTEPYMAVHHLLLAH--------ASVARLVANPL----VYGDYPKTMK 254
+P L N A HHLLL H A+ AR V L YG+ P+ +
Sbjct: 179 APGLRNLEAA------LRAAHHLLLGHGLAVEALRAAGARRVGIVLNFAPAYGEDPEAVD 232
Query: 255 --------------QNAGSRLPAFTD--------RESQQIKGSADFIGVINYCMIYIKDN 292
G F D R+ + + DF+GV Y + +
Sbjct: 233 VADRYHNRFFLDPILGKGYPESPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPG 292
Query: 293 PSSLKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVYGNPPIYVHENGLAT 352
+L + M + P L +L+ R P+YV ENG A
Sbjct: 293 TGTLPVRYLPPEGPATAMGW--------EVYPEGLHHLLKRLGREVPW-PLYVTENGAAY 343
Query: 353 PR----HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGL 408
P + +ED RV YL A++ + L A G + RGYFVWS +D FE GY GL
Sbjct: 344 PDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRSGL 403
Query: 409 YYVDRDDPDLKRYPKLSALWYSQ 431
YYV D P +R PK SALWY +
Sbjct: 404 YYV--DFPSQRRIPKRSALWYRE 424
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 223/458 (48%), Gaps = 85/458 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYK 82
FP F++G+ T+AYQ+EGA EDGR SIWDTFAH PG G+VACD YH+Y+
Sbjct: 6 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT---PGKVFNGDNGNVACDSYHRYE 62
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHL 142
ED++LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L GI+P TL+H
Sbjct: 63 EDIRLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHW 122
Query: 143 DLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
DLPQAL+D GGW NR ++ F +A+ FREF ++ +W T NEP A + G+
Sbjct: 123 DLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHA 181
Query: 203 PKRCSPPLNNCSRGNSSTEPYMAV-HHLLLAH---------------------------- 233
P G ++ + + V HHLL+AH
Sbjct: 182 P------------GLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWAVPY 229
Query: 234 -------ASVARLVA-------NPLVYGDYPKTMKQ---NAGSRLPAFTDRESQQIKGSA 276
A+ AR ++ P+ G YP+ + G+ +P D + I
Sbjct: 230 STSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPI 288
Query: 277 DFIGVINYCMIYIKDNPSS--LKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYF 334
D IG+ Y M + NP + L+ E + + + E L VL Y
Sbjct: 289 DMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGW--------PVESRGLYEVLHYL 340
Query: 335 KRVYGNPPIYVHENGLATPR---HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWS 391
++ YGN IY+ ENG + ++D R+ Y+ ++ V + +G + +GY WS
Sbjct: 341 QK-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWS 399
Query: 392 FLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWY 429
LD FE +GY +G+ +VD R PK S WY
Sbjct: 400 LLDNFEWAEGYNMRFGMIHVDFRTQ--VRTPKESYYWY 435
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 223/458 (48%), Gaps = 85/458 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYK 82
FP F++G+ T+AYQ+EGA EDGR SIWDTFAH PG G+VACD YH+Y+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHT---PGKVFNGDNGNVACDSYHRYE 61
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHL 142
ED++LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L GI+P TL+H
Sbjct: 62 EDIRLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHW 121
Query: 143 DLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
DLPQAL+D GGW NR ++ F +A+ FREF ++ +W T NEP A + G+
Sbjct: 122 DLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHA 180
Query: 203 PKRCSPPLNNCSRGNSSTEPYMAV-HHLLLAH---------------------------- 233
P G ++ + + V HHLL+AH
Sbjct: 181 P------------GLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWAVPY 228
Query: 234 -------ASVARLVA-------NPLVYGDYPKTMKQ---NAGSRLPAFTDRESQQIKGSA 276
A+ AR ++ P+ G YP+ + G+ +P D + I
Sbjct: 229 STSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPI 287
Query: 277 DFIGVINYCMIYIKDNPSS--LKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYF 334
D IG+ Y M + NP + L+ E + + + E L VL Y
Sbjct: 288 DMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGW--------PVESRGLYEVLHYL 339
Query: 335 KRVYGNPPIYVHENGLATPR---HSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWS 391
++ YGN IY+ ENG + ++D R+ Y+ ++ V + +G + +GY WS
Sbjct: 340 QK-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWS 398
Query: 392 FLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWY 429
LD FE +GY +G+ +VD R PK S WY
Sbjct: 399 LLDNFEWAEGYNMRFGMIHVDFRTQ--VRTPKESYYWY 434
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 206/459 (44%), Gaps = 80/459 (17%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYK 82
FP GF++G+ TS+YQ+EGA NEDG+ SIWD F +PG +GDVACD YH+Y+
Sbjct: 5 FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTR---IPGKIKNGDSGDVACDHYHRYE 61
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHL 142
+D+ LM GL YRFSI+W+R+ P+ +N +GL +Y L+ L I P TL+H
Sbjct: 62 QDLDLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHW 121
Query: 143 DLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
DLPQ +EDE GGW++R F Y GD++ W T NEP GY G+
Sbjct: 122 DLPQWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFA 180
Query: 203 PKRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVAR------------------------ 238
P P L HHLLL+H +
Sbjct: 181 PGLKDPTLGG-----------RVAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPV 229
Query: 239 -------------------LVANPLVYGDYPKTMKQNAGSRLPAFTDRESQQ-IKGSADF 278
L PL+ G Y + A LP F E Q I DF
Sbjct: 230 SAEPADVEAARRMHSFQNELFLEPLIRGQYNQATLM-AYPNLPEFIAPEDMQTISAPIDF 288
Query: 279 IGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVY 338
+GV Y + +K +P E + M + P L +L R Y
Sbjct: 289 LGVNYYNPMRVKSSPQPPGIEVVQVESPVTAMGW--------EIAPEGLYDLLMGITRTY 340
Query: 339 GNPPIYVHENGLA---TPRHS-SLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLD 394
G PIY+ ENG A P S + D RV Y +IG+ A+ +G + RGY+ WS LD
Sbjct: 341 GKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAWSLLD 400
Query: 395 VFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFL 433
FE +GY+ +G+ YVD + +R K SA WY +
Sbjct: 401 NFEWAEGYSKRFGIIYVDFETQ--QRTLKQSAQWYRDVI 437
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 206/459 (44%), Gaps = 80/459 (17%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPG------TGDVACDEYHKYK 82
FP GF++G+ TS+YQ+EGA NEDG+ SIWD F +PG +GDVACD YH+Y+
Sbjct: 26 FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFT---RIPGKIKNGDSGDVACDHYHRYE 82
Query: 83 EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHL 142
+D+ LM GL YRFSI+W+R+ P+ +N +GL +Y L+ L I P TL+H
Sbjct: 83 QDLDLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHW 142
Query: 143 DLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAP 202
DLPQ +EDE GGW++R F Y GD++ W T NEP GY G+
Sbjct: 143 DLPQWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFA 201
Query: 203 PKRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVAR------------------------ 238
P P L HHLLL+H +
Sbjct: 202 PGLKDPTLGG-----------RVAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPV 250
Query: 239 -------------------LVANPLVYGDYPKTMKQNAGSRLPAFTDRESQQ-IKGSADF 278
L PL+ G Y + A LP F E Q I DF
Sbjct: 251 SAEPADVEAARRMHSFQNELFLEPLIRGQYNQATLM-AYPNLPEFIAPEDMQTISAPIDF 309
Query: 279 IGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVY 338
+GV Y + +K +P E + M + P L +L R Y
Sbjct: 310 LGVNYYNPMRVKSSPQPPGIEVVQVESPVTAMGW--------EIAPEGLYDLLMGITRTY 361
Query: 339 GNPPIYVHENGLA---TPRHS-SLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLD 394
G PIY+ ENG A P S + D RV Y +IG+ A+ +G + RGY+ WS LD
Sbjct: 362 GKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAWSLLD 421
Query: 395 VFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFL 433
FE +GY+ +G+ YVD + +R K SA WY +
Sbjct: 422 NFEWAEGYSKRFGIIYVDFETQ--QRTLKQSAQWYRDVI 458
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 213/481 (44%), Gaps = 87/481 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPGTGDVACDEYHKYKEDVKLM 88
P FIFG T+AYQ EGA + DG+ P WD + N T + A D YHKY D++L
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYWYTAEPASDFYHKYPVDLELA 63
Query: 89 ADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLPQAL 148
+ G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHH D P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 149 EDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRCSP 208
G ++NR ++ F YA CF EF + V+YWTT NE Y G PP
Sbjct: 124 HSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPP----- 176
Query: 209 PLNNCSRGNSSTEPYMAVHHLLLAHASVARLVANPLVYGD----------YPKTMKQNAG 258
+ + + H+++++HA +L + G+ YP + A
Sbjct: 177 -----GIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPAD 231
Query: 259 SRLPAFTDRESQQIKGSADFIGVINYCMIYIK-------DNPSSLKQEHRDWSADTAT-- 309
R D + A ++G +YC ++ +N L D+ A A
Sbjct: 232 VRAAELEDIIHNKFILDATYLG--HYCDKTMEGVNHILAENGGELDLRDEDFQALDAAKD 289
Query: 310 --------------MAFFEQDTAASSNEP-----SSLQI--------------------- 329
M F+ +T N S QI
Sbjct: 290 LNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWII 349
Query: 330 ----VLEYFKRVYGNPPIY----VHENGLATPRH---SSLEDISRVKYLHAYIGSVLDAV 378
+ + RV + P Y + ENGL +++ D R+ Y+ ++ + DA+
Sbjct: 350 YPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAI 409
Query: 379 RNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRSV 438
+G+N +GYF+WS +DVF +GY YGL+YVD D + RYPK SA WY + + + +
Sbjct: 410 ADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQE--RYPKKSAHWYKKLAETQVI 467
Query: 439 R 439
Sbjct: 468 E 468
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 211/482 (43%), Gaps = 92/482 (19%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVPGT---GDVAC 75
P F++G +A+Q+EG E G+ S+ D AG + G A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHEAI 66
Query: 76 DEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 134
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y++L +E + YGI+
Sbjct: 67 DFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIE 126
Query: 135 PHVTLHHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMV 194
P VTL H +LP L EYGG+ NR ++ F +A+VCFR + D+V YW T NE N A
Sbjct: 127 PVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANY 186
Query: 195 GYDFGIAPPKRCSPPLNNC-----SRGNSSTEPYMAVHHLLLAHASVARL---------- 239
DF P N + Y A H+ L+A A ++
Sbjct: 187 QEDFA---------PFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLNI 237
Query: 240 -------------------------------VANPLVYGDYPKTMKQNAGSRLPA--FTD 266
A+ V+G YP+ + + + FT+
Sbjct: 238 GCMVAMCPIYPATCNPKDILMAQKAMQKRYYFADVHVHGFYPEHIFKYWERKAIKVDFTE 297
Query: 267 RESQQI-KGSADFIGVINYCMIYIKD-----NPSSLKQEHRDWSADTATMAFFEQDTAAS 320
R+ + + +G+ D+IG +Y M ++ D NP E + D + +
Sbjct: 298 RDKKDLFEGTVDYIG-FSYYMSFVIDAHRENNPYYDYLE----TEDLVKNPYVKASDWDW 352
Query: 321 SNEPSSLQIVLEYFKRVYGNPPIYVHENGLA----TPRHSSLEDISRVKYLHAYIGSVLD 376
+P L+ L +F +Y + P+++ ENG + D R+ YL A+I ++
Sbjct: 353 QIDPQGLRYALNWFTDMY-HLPLFIVENGFGAIDQVEADGMVHDDYRIDYLGAHIKEMIK 411
Query: 377 AV-RNGSNTRGYFVWSFLDVFELLDG-YASSYGLYYVDRDDP---DLKRYPKLSALWYSQ 431
AV +G GY W +D+ G YG YVD+DD LKR PKLS WY +
Sbjct: 412 AVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKE 471
Query: 432 FL 433
+
Sbjct: 472 VI 473
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 211/482 (43%), Gaps = 92/482 (19%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVPGT---GDVAC 75
P F++G +A+Q+EG E G+ S+ D AG + G A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHEAI 66
Query: 76 DEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 134
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y++L +E + YGI+
Sbjct: 67 DFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIE 126
Query: 135 PHVTLHHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMV 194
P VTL H +LP L EYGG+ NR ++ F +A+VCFR + D+V YW T NE N A
Sbjct: 127 PVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANY 186
Query: 195 GYDFGIAPPKRCSPPLNNC-----SRGNSSTEPYMAVHHLLLAHASVARL---------- 239
DF P N + Y A H+ L+A A ++
Sbjct: 187 QEDFA---------PFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLNI 237
Query: 240 -------------------------------VANPLVYGDYPKTMKQNAGSRLPA--FTD 266
A+ V+G YP+ + + + FT+
Sbjct: 238 GCMVAMCPIYPATCNPKDILMAQKAMQKRYYFADVHVHGFYPEHIFKYWERKAIKVDFTE 297
Query: 267 RESQQI-KGSADFIGVINYCMIYIKD-----NPSSLKQEHRDWSADTATMAFFEQDTAAS 320
R+ + + +G+ D+IG +Y M ++ D NP E + D + +
Sbjct: 298 RDKKDLFEGTVDYIG-FSYYMSFVIDAHRENNPYYDYLE----TEDLVKNPYVKASDWDW 352
Query: 321 SNEPSSLQIVLEYFKRVYGNPPIYVHENGLA----TPRHSSLEDISRVKYLHAYIGSVLD 376
+P L+ L +F +Y + P+++ +NG + D R+ YL A+I ++
Sbjct: 353 QIDPQGLRYALNWFTDMY-HLPLFIVQNGFGAIDQVEADGMVHDDYRIDYLGAHIKEMIK 411
Query: 377 AV-RNGSNTRGYFVWSFLDVFELLDG-YASSYGLYYVDRDDP---DLKRYPKLSALWYSQ 431
AV +G GY W +D+ G YG YVD+DD LKR PKLS WY +
Sbjct: 412 AVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKE 471
Query: 432 FL 433
+
Sbjct: 472 VI 473
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 207/481 (43%), Gaps = 90/481 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVPGT---GDVAC 75
P F++G +A+Q+EG E G+ S+ D AG + G A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVXTAGRHGVAREITAGVLEGKYYPNHEAI 66
Query: 76 DEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 134
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y++L +E + YGI+
Sbjct: 67 DFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIE 126
Query: 135 PHVTLHHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMV 194
P VTL H +LP L EYGG+ NR ++ F +A+VCFR + D+V YW T NE N A
Sbjct: 127 PVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINNQANY 186
Query: 195 GYDFGIAPPKRCSPPLNNC-----SRGNSSTEPYMAVHHLLLAHASVARL---------- 239
DF P N + Y A H+ L+A A ++
Sbjct: 187 QEDFA---------PFTNSGIVYKEGDDREAIXYQAAHYELVASARAVKIGHAINPNLNI 237
Query: 240 -------------------------------VANPLVYGDYPKTMKQNAGSRLPA--FTD 266
A+ V+G YP+ + + + FT+
Sbjct: 238 GCXVAXCPIYPATCNPKDILXAQKAXQKRYYFADVHVHGFYPEHIFKYWERKAIKVDFTE 297
Query: 267 RESQQI-KGSADFIGVINYCMIYI----KDNPSSLKQEHRDWSADTATMAFFEQDTAASS 321
R+ + + +G+ D+IG Y I ++NP E + D + +
Sbjct: 298 RDKKDLFEGTVDYIGFSYYXSFVIDAHRENNPYYDYLE----TEDLVKNPYVKASDWDWQ 353
Query: 322 NEPSSLQIVLEYFKRVYGNPPIYVHENGLA----TPRHSSLEDISRVKYLHAYIGSVLDA 377
+P L+ L +F Y + P+++ ENG + D R+ YL A+I + A
Sbjct: 354 IDPQGLRYALNWFTDXY-HLPLFIVENGFGAIDQVEADGXVHDDYRIDYLGAHIKEXIKA 412
Query: 378 V-RNGSNTRGYFVWSFLDVFELLDG-YASSYGLYYVDRDDP---DLKRYPKLSALWYSQF 432
V +G GY W +D+ G YG YVD+DD LKR PKLS WY +
Sbjct: 413 VDEDGVELXGYTPWGCIDLVSAGTGEXRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEV 472
Query: 433 L 433
+
Sbjct: 473 I 473
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 203/445 (45%), Gaps = 70/445 (15%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPGTGDVACDEYHKYKEDVKLM 88
FP F+FG+ TS++Q+EG + W + G +P AC+ + Y++D++LM
Sbjct: 5 FPEMFLFGTATSSHQIEGNNRWND-----WWYYEQIGKLPYRSGKACNHWELYRDDIQLM 59
Query: 89 ADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLPQAL 148
G +AYRFSI WSRL P N Y +I+ L++ GI P VTLHH P
Sbjct: 60 TSLGYNAYRFSIEWSRLFPE-ENKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLWF 118
Query: 149 EDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRCSP 208
+ GG++ +K + Y + E ++V T NEP + M+GY PP SP
Sbjct: 119 MKK-GGFLREENLKHWEKYIEKV-AELLEKVKLVATFNEPMVYVMMGYLTAYWPPFIRSP 176
Query: 209 PLNNCSRGNSSTEPYMAVHHLLLAHASVARLVANPLVYGDYPKTMKQNAGSRLPAFTDRE 268
+ + +LL AHA +A L++G + + +N LPA +D+E
Sbjct: 177 -----------FKAFKVAANLLKAHA-----IAYELLHGKFKVGIVKNIPIILPA-SDKE 219
Query: 269 ----------------------SQQIKG----------SADFIGVINYCMIYIKDNPSSL 296
S + +G ADFIGV Y ++ + L
Sbjct: 220 RDRKAAEKADNLFNWHFLDAIWSGKYRGVFKTYRIPQSDADFIGVNYYTASEVRHTWNPL 279
Query: 297 KQEHRDWSADTATMAFFEQDTAASSNEPSSLQIVLEYFKRVYGNPPIYVHENGLATPRHS 356
K AD + + S P + + L+ R YG P+Y+ ENG+AT
Sbjct: 280 KFFFEVKLADISE----RKTQMGWSVYPKGIYMALKKASR-YGR-PLYITENGIAT---- 329
Query: 357 SLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDP 416
L+D RV+++ ++ V A+ +G + RGYF WSF+D +E +G+ +GL V+ D
Sbjct: 330 -LDDEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFMDNYEWKEGFGPRFGL--VEVDYQ 386
Query: 417 DLKRYPKLSALWYSQFLKGRSVRSD 441
+R P+ SA Y + + + ++ +
Sbjct: 387 TFERRPRKSAYVYGEIARSKEIKDE 411
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 202/475 (42%), Gaps = 82/475 (17%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGN----------VPGT---GDVAC 75
FP GF++G +A+Q+EG E G+ S D N V G A
Sbjct: 11 FPEGFLWGGAVAAHQLEGGYKEGGKGLSTADIXTLGTNERPREITDGVVAGKYYPNHQAI 70
Query: 76 DEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISYGIQ 134
D YH+Y ED++L A+ G +R SI+W+R+ PNG N GLQ+Y++L +E + GIQ
Sbjct: 71 DFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQ 130
Query: 135 PHVTLHHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMV 194
P VTL H + P L +YGGW NR +++ + +A VCF + D+V+YW T NE N
Sbjct: 131 PVVTLAHFEXPYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNEINNQTNF 190
Query: 195 GYDFG-IAPPKRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVARL-------------V 240
D + P N R Y A H+ L+A A+ +L +
Sbjct: 191 ESDGAXLTDSGIIHQPGENRERWX-----YQAAHYELVASAAAVQLGHQINPDFQIGCXI 245
Query: 241 ANPLVY----------------------------GDYPKTMKQNAGSRLPAFTDRESQQI 272
A +Y G YP+ ++ S D ++ +
Sbjct: 246 AXCPIYPLTAAPADVLFAQRAXQTRFYFADVHCNGTYPQWLRNRFESEHFNL-DITAEDL 304
Query: 273 K----GSADFIGVINYCMIYIKDNPS-SLKQEHRDWSADTATMAFFEQDTAASSNEPSSL 327
K G+ D+IG Y +KD + +EH D + + +P L
Sbjct: 305 KILQAGTVDYIGFSYYXSFTVKDTGKLAYNEEH-----DLVKNPYVKASDWGWQVDPVGL 359
Query: 328 QIVLEYFKRVYGNPPIYVHENGLAT----PRHSSLEDISRVKYLHAYIGSV-LDAVRNGS 382
+ +F Y + P+++ ENGL + + D R+ YL ++ + L + +G
Sbjct: 360 RYAXNWFTDRY-HLPLFIVENGLGAIDKKTADNQIHDDYRIDYLTDHLRQIKLAVLEDGV 418
Query: 383 NTRGYFVWSFLDVFELLDGYASS-YGLYYVDRDDP---DLKRYPKLSALWYSQFL 433
+ GY W +D+ G S YG YVD +D LKRY K S W+ +
Sbjct: 419 DLIGYTPWGCIDLVAASTGQXSKRYGFIYVDENDDGSGSLKRYKKDSFTWFQHVI 473
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 202/477 (42%), Gaps = 73/477 (15%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRT---------PSIWDTFAHAGNVPGTGDVACDEYH 79
FP F +G TS Q EG + R P ++ + D A D YH
Sbjct: 3 FPKEFWWGGATSGPQSEGRFAKQHRNLFDYWYEEEPDLFYDYV-------GPDTASDAYH 55
Query: 80 KYKEDVKLMADTGLDAYRFSISWSRLIPN-GRGPVNPKGLQYYNNLINELISYGIQPHVT 138
+ + D+ L+A G ++YR SI W+RLI + + +NP GL YYN +I+ ++ GI+P +
Sbjct: 56 QIESDLTLLASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVIN 115
Query: 139 LHHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEP---------- 188
LHH DLP AL YGGW ++ +V F A++ VCF +FGDRV W NEP
Sbjct: 116 LHHFDLPIALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWFVHNEPMVVVEGSYLM 175
Query: 189 ----------NGFAMVGYDFGIAPPK------RCSPPLNNCSRGN----------SSTEP 222
V Y+ +A K R L++ G S +E
Sbjct: 176 QFHYPAIVDGKKAVQVAYNLALATAKVIQAYRRGPAELSDGRIGTILNLTPAYPASQSEA 235
Query: 223 YMAVHHLLLAHASVARLVANPLVYGDYPKTMK---QNAGSRLPAFTDRESQQIKGSADFI 279
MA H A L V+G +P+ + + G + + + + D++
Sbjct: 236 DMAAAH--FAELWNNDLFMEAAVHGKFPEELVAVLKKDGVLWQSTPEELALIAENRVDYL 293
Query: 280 GVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNE-----PSSLQIVLEYF 334
G+ Y +K P ++ WS + + + ++ P ++ +
Sbjct: 294 GLNFYHPKRVK-APDAIPVISPSWSPEWYYDPYLMPGRRMNVDKGWEIYPEAVYDIAIKM 352
Query: 335 KRVYGNPPIYVHENGLATP-------RHSSLEDISRVKYLHAYIGSVLDAVRNGSNTRGY 387
+ Y N P ++ ENG+ ++D R+++L ++ + + GSN GY
Sbjct: 353 RDHYDNIPWFLSENGVGISGEDRYRDETGQIQDDYRIQFLKEHLTYLHKGIEAGSNCFGY 412
Query: 388 FVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRSVRSDEVF 444
VW+ +D + L+ Y + YGL V+ + R PK SA W+ + + S EV
Sbjct: 413 HVWTPIDGWSWLNAYKNRYGL--VENNIHTQVRRPKASAYWFKKVATHNRLISLEVM 467
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPGTGDVACDEYHKYKEDVKLM 88
P FIFG T+AYQ EGA + DG+ P WD + N T + A D YHKY D++L
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYWYTAEPASDFYHKYPVDLELA 63
Query: 89 ADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLPQAL 148
+ G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHH D P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 149 EDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRCSP 208
G ++NR ++ F YA CF EF + V+YWTT NE Y G PP
Sbjct: 124 HSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPP----- 176
Query: 209 PLNNCSRGNSSTEPYMAVHHLLLAHASVARL 239
+ + + H+++++HA +L
Sbjct: 177 -----GIKYDLAKVFQSHHNMMVSHARAVKL 202
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Query: 343 IYVHENGLATPRH---SSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELL 399
IY+ ENGL +++ D R+ Y+ ++ + DA+ +G+N +GYF+WS +DVF
Sbjct: 371 IYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWS 430
Query: 400 DGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRSVR 439
+GY YGL+YVD D + RYPK SA WY + + + +
Sbjct: 431 NGYEKRYGLFYVDFDTQE--RYPKKSAHWYKKLAETQVIE 468
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPGTGDVACDEYHKYKEDVKLM 88
P FIFG T+AYQ EGA + DG+ P WD + N T + A D YHKY D++L
Sbjct: 5 LPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYWYTAEPASDFYHKYPVDLELA 63
Query: 89 ADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHLDLPQAL 148
+ G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHH D P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 149 EDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRCSP 208
G ++NR ++ F YA CF EF + V+YWTT NE Y G PP
Sbjct: 124 HSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPP----- 176
Query: 209 PLNNCSRGNSSTEPYMAVHHLLLAHASVARL 239
+ + + H+++++HA +L
Sbjct: 177 -----GIKYDLAKVFQSHHNMMVSHARAVKL 202
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 343 IYVHENGLATPRH---SSLEDISRVKYLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELL 399
IY+ NGL +++ D R+ Y+ ++ + DA+ +G+N +GYF+WS +DVF
Sbjct: 371 IYITCNGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWS 430
Query: 400 DGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRSVR 439
+GY YGL+YVD D + RYPK SA WY + + + +
Sbjct: 431 NGYEKRYGLFYVDFDTQE--RYPKKSAHWYKKLAETQVIE 468
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 113/232 (48%), Gaps = 28/232 (12%)
Query: 26 KNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTF---AHAGNVPGTGDV--------- 73
K P F++G +A+QVEG N+ G+ PSI D AH T +V
Sbjct: 5 KLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNH 64
Query: 74 -ACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNNLINELISY 131
A D Y YKED+KL A+ G +R SI+W+R+ P G N +GL++Y+++ +EL+ Y
Sbjct: 65 EAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKY 124
Query: 132 GIQPHVTLHHLDLPQALEDEYGGWINRMIVKDFTAYADVCFREFGDRVSYWTTVNEPNG- 190
I+P +TL H ++P L +YG W NR +V F +A+V F + +V YW T NE N
Sbjct: 125 NIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQ 184
Query: 191 ----FAMVGYDFGIAPPKRCSPPLNNCSRGNSSTEPYMAVHHLLLAHASVAR 238
+ GY C + N Y +HH +A A +
Sbjct: 185 RNWRAPLFGY---------CCSGVVYTEHENPEETMYQVLHHQFVASALAVK 227
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 182/476 (38%), Gaps = 88/476 (18%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPGTGDVACD-------EYHKY 81
FP F+FG S +Q E S W + H +G V+ D +H Y
Sbjct: 4 FPKNFMFGYSWSGFQFEMGL-PGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLY 62
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPV---------------------------- 113
K+D + G+D R I W+R+ P V
Sbjct: 63 KQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKI 122
Query: 114 -NPKGLQYYNNLINELISYGIQPHVTLHHLDLPQALEDEYG-----------GWINRMIV 161
N + L++Y + ++ G + L+H LP + D GW++ V
Sbjct: 123 ANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTV 182
Query: 162 KDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRCSPPLNNCSRGNSSTE 221
+F +A D V W+T+NEPN V Y+ G + PP +
Sbjct: 183 VEFVKFAAFVAYHLDDLVDMWSTMNEPN----VVYNQGYINLRSGFPPGYLSFEAAEKAK 238
Query: 222 PYMAVHHL-------LLAHASVARLVA----NPLV--YGDYPKTMKQNAGSRLPAFTDRE 268
+ H+ + SV + A +PL Y D + +++ D E
Sbjct: 239 FNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKK---------DYE 289
Query: 269 SQQI---KGSADFIGVINYC-MIYIKDNPSSLKQEHRDWSADTATMAFFEQDTAASSNE- 323
I KG D+IGV Y ++Y + + + ++ A + + E
Sbjct: 290 FVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEM 349
Query: 324 -PSSLQIVLEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYLHAYIGSVLDAVRNGS 382
P L+ +L+Y Y P I + ENG+A D R YL +++ +V +A++ G+
Sbjct: 350 YPEGLENLLKYLNNAYELPMI-ITENGMA-----DAADRYRPHYLVSHLKAVYNAMKEGA 403
Query: 383 NTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQFLKGRSV 438
+ RGY WS D +E G+ +GL YVD + KRY + SAL + + + +
Sbjct: 404 DVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETK--KRYLRPSALVFREIATQKEI 457
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 183/498 (36%), Gaps = 112/498 (22%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVPGTGDVACDEY 78
FP F+FG + +Q E S W + H +G+ P G Y
Sbjct: 4 FPKDFLFGWSQAGFQSEMGTPGSEDPNSDWYAWVHDRENIAAGLVSGDFPENGPGYWGNY 63
Query: 79 HKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPV------------------------- 113
K+ + + M GL A R + WSR+ P V
Sbjct: 64 RKFHDAAQAM---GLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLD 120
Query: 114 ---NPKGLQYYNNLINELISYGIQPHVTLHHLDLPQALEDEYG----------GWINRMI 160
N + +Y + ++L S GI + L+H LP L D GW++
Sbjct: 121 KMANRDAINHYREMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDVRT 180
Query: 161 VKDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIAPPKRCSPPLNNCSRGNSST 220
V +F ++ + D V ++T+NEPN V + G A K PP C
Sbjct: 181 VIEFAKFSAYVAWKLDDLVYMYSTMNEPN----VVWGLGYAAVKSGFPPGYLCLECAGR- 235
Query: 221 EPYMAVHHLLLAHA----SVARLVANPL--VYGD---YPKTMKQNAGSRLPAFTDRES-- 269
A+ +L+ AHA +V + P+ +Y + P T + F +R +
Sbjct: 236 ----AMKNLVQAHARAYDAVKAITKKPVGVIYANSDFTPLTDADREAAERAKFDNRWAFF 291
Query: 270 -------------QQIKGSADFIGVINYCMIYIKDNPSSLKQEHRDWSADTATMAFFEQD 316
+KG D+IGV Y ++ S + E +
Sbjct: 292 DAVVRGQLGGSTRDDLKGRLDWIGVNYYTRQVVRARGSG-------YEIVPGYGHGCEPN 344
Query: 317 TAASSNEPSS-----------LQIVLEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVK 365
+ + P S ++ EY+ R + P+ V ENG+A D R
Sbjct: 345 GVSPAGRPCSDFGWEFYPEGLYNVLKEYWDRYH--LPLLVTENGIADE-----GDYQRPY 397
Query: 366 YLHAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLS 425
YL +++ V A+++G N GY WS D +E G++ +GL VD L P S
Sbjct: 398 YLVSHVYQVHRALQDGVNVIGYLHWSLADNYEWASGFSKRFGLLMVDYSTKRLHWRP--S 455
Query: 426 ALWYSQFLKGRSVRSDEV 443
A Y + K R++ +DE+
Sbjct: 456 AFIYREIAKSRAI-TDEI 472
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 176/481 (36%), Gaps = 96/481 (19%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVPGTGDVACD-------EYHKY 81
FP F+ G +S +Q E S W + H G V+ D ++
Sbjct: 3 FPKDFMIGYSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLVSGDFPENGPGYWNLN 62
Query: 82 KEDVKLMADTGLDAYRFSISWSRLIP----NGRGPV------------------------ 113
+ D L G++ R + WSR+ P N + PV
Sbjct: 63 QNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDEL 122
Query: 114 -NPKGLQYYNNLINELISYGIQPHVTLHHLDLPQALEDEY-----------GGWINRMIV 161
N + + +Y + + + G + + L+H LP L + GW+N V
Sbjct: 123 ANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESV 182
Query: 162 KDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDF--GIAPPKRCSPPLNNCSRGNSS 219
+F YA + G+ W+T+NEPN GY F G PP S + +R N
Sbjct: 183 VEFAKYAAYIAWKMGELPVMWSTMNEPNVVYEQGYMFVKGGFPPGYLSLEAADKARRN-- 240
Query: 220 TEPYMAVHHLLLAHA----SVARLVANP--LVYG-------DYP-KTMKQNAGSRLPAFT 265
++ AHA ++ R P L+Y + P + + S+L FT
Sbjct: 241 ---------MIQAHARAYDNIKRFSKKPVGLIYAFQWFELLEGPAEVFDKFKSSKLYYFT 291
Query: 266 DRESQ-----------QIKGSADFIGVINYCMIYIK---DNPSSLKQEHRDWSADTATMA 311
D S+ + D++GV Y + K D P L + + A
Sbjct: 292 DIVSKGSSIINVEYRRDLANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPA 351
Query: 312 FFEQDTAASSNEPSSLQIVLEYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYLHAYI 371
P L ++L+ YG I V ENG++ R D R YL +++
Sbjct: 352 ENPCSDFGWEVYPEGLYLLLKELYNRYGVDLI-VTENGVSDSR-----DALRPAYLVSHV 405
Query: 372 GSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSALWYSQ 431
SV A G +GY WS D +E G+ +GL VD KRY + SAL + +
Sbjct: 406 YSVWKAANEGIPVKGYLHWSLTDNYEWAQGFRQKFGLVMVDFKTK--KRYLRPSALVFRE 463
Query: 432 F 432
Sbjct: 464 I 464
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 189/496 (38%), Gaps = 105/496 (21%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVPGTGDVACDEY 78
FP F FG + +Q E + W + H +G++P G Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 79 HKYKEDVKLMADTGLDAYRFSISWSRLIPN----------GRGPV--------------- 113
+ ++ + M GL R ++ WSR+ PN + V
Sbjct: 64 KTFHDNAQKM---GLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDE 120
Query: 114 --NPKGLQYYNNLINELISYGIQPHVTLHHLDLPQALEDEY----------GGWINRMIV 161
N L +Y + +L S G+ + ++H LP L D GW++ V
Sbjct: 121 YANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTV 180
Query: 162 KDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA--PPKRCSPPLNNCSRGNSS 219
+F ++ +F D V ++T+NEPN +GY + PP S L+
Sbjct: 181 YEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSR------- 233
Query: 220 TEPYMAVHHLLLAHAS------------VARLVAN----PLVYGDYPKTMKQNAGSRLPA 263
A+++++ AHA V + AN PL D +R
Sbjct: 234 ----RAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWF 289
Query: 264 F-------TDRESQQI-----KGSADFIGVINYCMIYIKDNPS---SLKQEHRDWSADTA 308
F R +++I KG D+IGV Y +K SL ++
Sbjct: 290 FDAIIRGEITRGNEKIVRDDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSV 349
Query: 309 TMAFFEQDTAASSNEPSSLQIVL-EYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYL 367
++A P L VL +Y+ R + +YV ENG+A D R YL
Sbjct: 350 SLAGLPTSDFGWEFFPEGLYDVLTKYWNRYHLY--MYVTENGIADD-----ADYQRPYYL 402
Query: 368 HAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSAL 427
+++ V A+ +G++ RGY WS D +E G++ +GL VD + L Y + SAL
Sbjct: 403 VSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNTKRL--YWRPSAL 460
Query: 428 WYSQFLKGRSVRSDEV 443
Y + ++ +DE+
Sbjct: 461 VYREIATNGAI-TDEI 475
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 189/496 (38%), Gaps = 105/496 (21%)
Query: 29 FPPGFIFGSGTSAYQVEGAA------NEDG----RTPSIWDTFAHAGNVPGTGDVACDEY 78
FP F FG + +Q E N DG P +G++P G Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDGYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 79 HKYKEDVKLMADTGLDAYRFSISWSRLIPN----------GRGPV--------------- 113
+ ++ + M GL R ++ WSR+ PN + V
Sbjct: 64 KTFHDNAQKM---GLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDE 120
Query: 114 --NPKGLQYYNNLINELISYGIQPHVTLHHLDLPQALEDEY----------GGWINRMIV 161
N L +Y + +L S G+ + ++H LP L D GW++ V
Sbjct: 121 YANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTV 180
Query: 162 KDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA--PPKRCSPPLNNCSRGNSS 219
+F ++ +F D V ++T+NEPN +GY + PP S L+
Sbjct: 181 YEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSR------- 233
Query: 220 TEPYMAVHHLLLAHAS------------VARLVAN----PLVYGDYPKTMKQNAGSRLPA 263
A+++++ AHA V + AN PL D +R
Sbjct: 234 ----RAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWF 289
Query: 264 F-------TDRESQQI-----KGSADFIGVINYCMIYIKDNPS---SLKQEHRDWSADTA 308
F R +++I KG D+IGV Y +K SL ++
Sbjct: 290 FDAIIRGEITRGNEKIVRDDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSV 349
Query: 309 TMAFFEQDTAASSNEPSSLQIVL-EYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYL 367
++A P L VL +Y+ R + +YV ENG+A D R YL
Sbjct: 350 SLAGLPTSDFGWEFFPEGLYDVLTKYWNRYHLY--MYVTENGIADD-----ADYQRPYYL 402
Query: 368 HAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSAL 427
+++ V A+ +G++ RGY WS D +E G++ +GL VD + L Y + SAL
Sbjct: 403 VSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNTKRL--YWRPSAL 460
Query: 428 WYSQFLKGRSVRSDEV 443
Y + ++ +DE+
Sbjct: 461 VYREIATNGAI-TDEI 475
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 186/496 (37%), Gaps = 105/496 (21%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVPGTGDVACDEY 78
FP F FG + +Q E + W + H +G++P G Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 79 HKYKEDVKLMADTGLDAYRFSISWSRLIPN----------GRGPV--------------- 113
+ ++ + M GL R + WSR PN + V
Sbjct: 64 KTFHDNAQKM---GLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDE 120
Query: 114 --NPKGLQYYNNLINELISYGIQPHVTLHHLDLPQALEDEY----------GGWINRMIV 161
N L +Y + +L S G+ ++H LP L D GW++ V
Sbjct: 121 YANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTV 180
Query: 162 KDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA--PPKRCSPPLNNCSRGNSS 219
+F ++ +F D V ++T+NEPN +GY + PP S L+
Sbjct: 181 YEFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSR------- 233
Query: 220 TEPYMAVHHLLLAHAS------------VARLVAN----PLVYGDYPKTMKQNAGSRLPA 263
A+++++ AHA V + AN PL D +R
Sbjct: 234 ----RAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWF 289
Query: 264 F-------TDRESQQI-----KGSADFIGVINYCMIYIKDNPS---SLKQEHRDWSADTA 308
F R +++I KG D+IGV Y +K SL ++
Sbjct: 290 FDAIIRGEITRGNEKIVRDDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSV 349
Query: 309 TMAFFEQDTAASSNEPSSLQIVL-EYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYL 367
++A P L VL +Y+ R + +YV ENG+A D R YL
Sbjct: 350 SLAGLPTSDFGWEFFPEGLYDVLTKYWNRYHLY--MYVTENGIADD-----ADYQRPYYL 402
Query: 368 HAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSAL 427
+++ V A+ +G++ RGY WS D +E G++ +GL VD + L Y + SAL
Sbjct: 403 VSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNTKRL--YWRPSAL 460
Query: 428 WYSQFLKGRSVRSDEV 443
Y + ++ +DE+
Sbjct: 461 VYREIATNGAI-TDEI 475
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 185/496 (37%), Gaps = 105/496 (21%)
Query: 29 FPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAH----------AGNVPGTGDVACDEY 78
FP F FG + +Q E + W + H +G++P G Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDLNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 79 HKYKEDVKLMADTGLDAYRFSISWSRLIPN----------GRGPV--------------- 113
+ + + M GL R + WSR PN + V
Sbjct: 64 KTFHNNAQKM---GLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDE 120
Query: 114 --NPKGLQYYNNLINELISYGIQPHVTLHHLDLPQALEDEY----------GGWINRMIV 161
N L +Y + +L S G+ ++H LP L D GW++ V
Sbjct: 121 YANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTV 180
Query: 162 KDFTAYADVCFREFGDRVSYWTTVNEPNGFAMVGYDFGIA--PPKRCSPPLNNCSRGNSS 219
+F ++ +F D V ++T+NEPN +GY + PP S L+
Sbjct: 181 YEFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSR------- 233
Query: 220 TEPYMAVHHLLLAHAS------------VARLVAN----PLVYGDYPKTMKQNAGSRLPA 263
A+++++ AHA V + AN PL D +R
Sbjct: 234 ----RAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWF 289
Query: 264 F-------TDRESQQI-----KGSADFIGVINYCMIYIKDNPS---SLKQEHRDWSADTA 308
F R +++I KG D+IGV Y +K SL ++
Sbjct: 290 FDAIIRGEITRGNEKIVRDDLKGRLDWIGVNYYTRTVVKRTGKGYVSLGGYGHGCERNSV 349
Query: 309 TMAFFEQDTAASSNEPSSLQIVL-EYFKRVYGNPPIYVHENGLATPRHSSLEDISRVKYL 367
++A P L VL +Y+ R + +YV ENG+A D R YL
Sbjct: 350 SLAGLPTSDFGWEFFPEGLYDVLTKYWNRYH--LYMYVTENGIADD-----ADYQRPYYL 402
Query: 368 HAYIGSVLDAVRNGSNTRGYFVWSFLDVFELLDGYASSYGLYYVDRDDPDLKRYPKLSAL 427
+++ V A+ +G++ RGY WS D +E G++ +GL VD + L Y + S+L
Sbjct: 403 VSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNTKRL--YWRPSSL 460
Query: 428 WYSQFLKGRSVRSDEV 443
Y + ++ +DE+
Sbjct: 461 VYREIATNGAI-TDEI 475
>pdb|3E05|A Chain A, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|B Chain B, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|C Chain C, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|D Chain D, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|E Chain E, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|F Chain F, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|G Chain G, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|H Chain H, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
Length = 204
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 59 DTFAHAGNVPGTGDVACDEYHKYK-EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKG 117
D FA A + +V K + +D +M D G + SI S L+PNGR +
Sbjct: 14 DEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERN 73
Query: 118 LQYYNNLINELISYGIQPHVTLHHLDLPQALED 150
QY + + L + + +VTL P+ L+D
Sbjct: 74 PQYLGFIRDNLKKF-VARNVTLVEAFAPEGLDD 105
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 68 PGTGDVACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLIN- 126
P TG+V C KEDV A++ W R+ + RG + L +LI
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL----LNRLADLIER 97
Query: 127 --------ELISYGIQPHVTLHHLDLPQALE--DEYGGWINR 158
E + G +P+V + +DL L+ Y GW ++
Sbjct: 98 DRTYLAALETLDNG-KPYVISYLVDLDMVLKCLRYYAGWADK 138
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 68 PGTGDVACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLIN- 126
P TG+V C KEDV A++ W R+ + RG + L +LI
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL----LNRLADLIER 97
Query: 127 --------ELISYGIQPHVTLHHLDLPQALE--DEYGGWINR 158
E + G +P+V + +DL L+ Y GW ++
Sbjct: 98 DRTYLAALETLDNG-KPYVISYLVDLDMVLKCLRYYAGWADK 138
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 68 PGTGDVACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLIN- 126
P TG+V C KEDV A++ W R+ + RG + L +LI
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL----LNRLADLIER 97
Query: 127 --------ELISYGIQPHVTLHHLDLPQALE--DEYGGWINR 158
E + G +P+V + +DL L+ Y GW ++
Sbjct: 98 DRTYLAALETLDNG-KPYVISYLVDLDMVLKCLRYYAGWADK 138
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 68 PGTGDVACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLIN- 126
P TG+V C KEDV A++ W R+ + RG + L +LI
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL----LNRLADLIER 97
Query: 127 --------ELISYGIQPHVTLHHLDLPQALE--DEYGGWINR 158
E + G +P+V + +DL L+ Y GW ++
Sbjct: 98 DRTYLAALETLDNG-KPYVISYLVDLDMVLKCLRYYAGWADK 138
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 68 PGTGDVACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLIN- 126
P TG+V C KEDV A++ W R+ + RG + L +LI
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL----LNRLADLIER 97
Query: 127 --------ELISYGIQPHVTLHHLDLPQALE--DEYGGWINR 158
E + G +P+V + +DL L+ Y GW ++
Sbjct: 98 DRTYLAALETLDNG-KPYVISYLVDLDMVLKCLRYYAGWADK 138
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 68 PGTGDVACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLIN- 126
P TG+V C KEDV A++ W R+ + RG + L +LI
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL----LNRLADLIER 97
Query: 127 --------ELISYGIQPHVTLHHLDLPQALE--DEYGGWINR 158
E + G +P+V + +DL L+ Y GW ++
Sbjct: 98 DRTYLAALETLDNG-KPYVISYLVDLDMVLKCLRYYAGWADK 138
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 68 PGTGDVACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLIN- 126
P TG+V C KEDV A++ W R+ + RG + L +LI
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL----LNRLADLIER 97
Query: 127 --------ELISYGIQPHVTLHHLDLPQALE--DEYGGWINR 158
E + G +P+V + +DL L+ Y GW ++
Sbjct: 98 DRTYLAALETLDNG-KPYVISYLVDLDMVLKCLRYYAGWADK 138
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 68 PGTGDVACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLIN- 126
P TG+V C KEDV A++ W R+ + RG + L +LI
Sbjct: 36 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL----LNRLADLIER 91
Query: 127 --------ELISYGIQPHVTLHHLDLPQALE--DEYGGWINR 158
E + G +P+V + +DL L+ Y GW ++
Sbjct: 92 DRTYLAALETLDNG-KPYVISYLVDLDMVLKCLRYYAGWADK 132
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 68 PGTGDVACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLIN- 126
P TG+V C KEDV A++ W R+ + RG + L +LI
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL----LNRLADLIER 97
Query: 127 --------ELISYGIQPHVTLHHLDLPQALE--DEYGGWINR 158
E + G +P+V + +DL L+ Y GW ++
Sbjct: 98 DRTYLAALETLDNG-KPYVISYLVDLDMVLKCLRYYAGWADK 138
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 14/101 (13%)
Query: 68 PGTGDVACDEYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINE 127
P TGDV C K DV A++ W R+ + RG + L +LI
Sbjct: 41 PSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDASERGRL----LNRLADLIER 96
Query: 128 LISY--------GIQPHVTLHHLDLPQALE--DEYGGWINR 158
+Y +P++ + +DL L+ Y GW ++
Sbjct: 97 DRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADK 137
>pdb|4DM5|A Chain A, Putative Osmotically Inducible Lipoprotein Osme
Characterization By Xray Crystallography
pdb|4DM5|B Chain B, Putative Osmotically Inducible Lipoprotein Osme
Characterization By Xray Crystallography
pdb|4DM5|C Chain C, Putative Osmotically Inducible Lipoprotein Osme
Characterization By Xray Crystallography
pdb|4DM5|D Chain D, Putative Osmotically Inducible Lipoprotein Osme
Characterization By Xray Crystallography
Length = 103
Score = 29.6 bits (65), Expect = 3.9, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 49 NEDGRTPSIWDTFAHAGNVPGTGDVACDEYHKYKEDVK 86
N+DG+ + +F +G V G+G ++C E +++ D +
Sbjct: 59 NKDGQQQPFYVSFDGSGKVDGSGFLSCSELDRHERDAR 96
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,906,673
Number of Sequences: 62578
Number of extensions: 685633
Number of successful extensions: 1846
Number of sequences better than 100.0: 88
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1374
Number of HSP's gapped (non-prelim): 172
length of query: 446
length of database: 14,973,337
effective HSP length: 102
effective length of query: 344
effective length of database: 8,590,381
effective search space: 2955091064
effective search space used: 2955091064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)