Query 013301
Match_columns 446
No_of_seqs 332 out of 1500
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 02:28:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013301.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013301hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1379 Serine/threonine prote 100.0 9E-50 1.9E-54 391.0 22.9 309 109-440 5-330 (330)
2 PLN03145 Protein phosphatase 2 100.0 1.1E-33 2.5E-38 289.9 25.7 208 204-443 67-332 (365)
3 COG0631 PTC1 Serine/threonine 100.0 1.6E-33 3.5E-38 277.2 23.8 210 202-443 8-254 (262)
4 PTZ00224 protein phosphatase 2 100.0 1.2E-30 2.7E-35 268.6 24.8 207 206-444 26-274 (381)
5 PRK14559 putative protein seri 100.0 4.3E-30 9.3E-35 278.6 27.6 215 202-444 375-638 (645)
6 cd00143 PP2Cc Serine/threonine 100.0 1.3E-29 2.7E-34 242.8 23.3 207 205-440 3-254 (254)
7 smart00332 PP2Cc Serine/threon 100.0 3.3E-28 7.2E-33 234.1 24.0 202 208-438 11-255 (255)
8 KOG0698 Serine/threonine prote 100.0 5.2E-27 1.1E-31 238.2 22.7 207 210-444 47-307 (330)
9 PF00481 PP2C: Protein phospha 100.0 2.4E-28 5.2E-33 238.2 12.0 191 208-404 5-248 (254)
10 KOG0697 Protein phosphatase 1B 99.9 1.2E-26 2.5E-31 224.0 17.9 217 198-445 20-295 (379)
11 KOG0699 Serine/threonine prote 99.9 6.1E-21 1.3E-25 190.0 17.9 141 286-443 330-505 (542)
12 KOG0700 Protein phosphatase 2C 99.8 2.1E-19 4.5E-24 182.4 16.0 184 216-404 84-377 (390)
13 KOG1323 Serine/threonine phosp 99.8 1.1E-18 2.4E-23 172.4 16.4 200 226-443 143-489 (493)
14 smart00331 PP2C_SIG Sigma fact 99.8 1.1E-17 2.3E-22 155.7 21.4 174 207-402 9-192 (193)
15 PF13672 PP2C_2: Protein phosp 99.8 3.8E-18 8.2E-23 161.0 14.0 170 207-384 3-195 (212)
16 TIGR02865 spore_II_E stage II 99.7 8.8E-17 1.9E-21 179.3 22.7 204 194-440 546-763 (764)
17 PF07228 SpoIIE: Stage II spor 99.6 5.2E-14 1.1E-18 130.4 22.6 175 226-441 3-193 (193)
18 COG2208 RsbU Serine phosphatas 99.0 3.1E-08 6.7E-13 102.1 20.1 187 216-441 161-366 (367)
19 KOG0618 Serine/threonine phosp 98.9 1.5E-08 3.3E-13 112.3 11.9 183 226-443 550-774 (1081)
20 PRK10693 response regulator of 90.9 2.1 4.6E-05 43.0 10.8 99 217-318 150-259 (303)
21 PF09436 DUF2016: Domain of un 43.2 13 0.00029 29.9 1.3 18 355-372 25-42 (72)
22 PF06972 DUF1296: Protein of u 38.4 41 0.0009 26.1 3.2 27 370-399 18-44 (60)
23 PF07177 Neuralized: Neuralize 25.4 85 0.0019 24.8 3.2 39 98-136 29-68 (69)
24 COG2168 DsrH Uncharacterized c 24.0 50 0.0011 28.1 1.7 30 353-382 21-50 (96)
No 1
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-50 Score=390.95 Aligned_cols=309 Identities=42% Similarity=0.594 Sum_probs=254.0
Q ss_pred cccceeeeee-ccCCCCCCCceeeeeeeeccccccccccccccccccccccccccccccCCCccccccCCcccccccCCc
Q 013301 109 SRCHKARMSS-RKRESPSGGLVSGYFIFDSVGRSSKSNVLGGGLCLKNIHTSSSMCFSAGSAHDLSFDGGSRNELIGSVA 187 (446)
Q Consensus 109 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 187 (446)
..|..++|.+ +..-+|.+++...++...++.-+.-.. ....+.-+++....++-|.+...+-
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~g~----~~~~~~~~~~~~~~~s~~~~~~~~~------------- 67 (330)
T KOG1379|consen 5 FRLLAIGMLLTKRAGQVLNRLVRHSSNVLRLSSQNAGF----VSFSKYAKSTYGSDNSPGEAASLSS------------- 67 (330)
T ss_pred ehhHHHHHHHHHhhhhhHhhhhhccccchhhhccccCc----cccccccccccccCCCCcccccchh-------------
Confidence 3566777777 455567777776666666555444333 2223333344433333332221110
Q ss_pred cccccccccceEEEEEEEecccCCCCccCCCceEEEec--CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 013301 188 SEQTILGERALKLLSGSCYLPHPAKEETGGEDAHFICG--DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEES 265 (446)
Q Consensus 188 s~~~~~~~~~l~l~~g~~~~s~~Gk~R~~NEDa~~v~~--~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~ 265 (446)
--..++...+.+..+++-++.+.+||+||++. ...++|||||+|||++.|+|+|.|+++||.++.+.+....
T Consensus 68 ------~vt~~~~~~~~~~~~~~~~~~~~GEDa~Fvss~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~ 141 (330)
T KOG1379|consen 68 ------LVTSLCGFSKDFIRPHPSKVGKGGEDAWFVSSNPHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSD 141 (330)
T ss_pred ------hhhhhccccccccCCccccCCCCCCcceeeccCcccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccc
Confidence 00233444556677788888899999999997 6789999999999999999999999999999988887776
Q ss_pred CCCCCHHHHHHHHHHccCcC-----CCceEEEEEEe--CCeEEEEEECCCcEEEEeCCeEEEcCcccccccccccccccc
Q 013301 266 THAIDPARVLEKAHSSTKAK-----GSSTACIIALT--SKAIHAVNLGDSGFMVVRDGCTIFQSPVQQHGFNFTYQLESG 338 (446)
Q Consensus 266 ~~~~~~~~~L~~A~~~~~~~-----GgSTavvavI~--~~~l~vaNVGDSRayLiR~g~iv~~S~~q~~~~n~p~qL~~g 338 (446)
....+|..+|.+||.++... |+|||||+++. +++||++|+|||.+.++|+|++++.|++|+|.||.||||+.+
T Consensus 142 ~~~~~P~~lL~~ay~~l~~~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~PyQLs~~ 221 (330)
T KOG1379|consen 142 FNPSDPVNLLEKAYAELKSQKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPYQLSSP 221 (330)
T ss_pred cCCCChHHHHHHHHHHHhhcCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCceeeccC
Confidence 67779999999999887555 99999999998 679999999999999999999999999999999999999875
Q ss_pred C------CCCCCCcceEEEEecCCCCEEEEEccCCCCCCCHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHhhccccCC
Q 013301 339 N------TGDLPSSGQVFTIPAAPGDVIVAGTDGLFDNLYNNEVTAVVVHALR-AGLGPQVTAQKIAALARQRAQDRNRQ 411 (446)
Q Consensus 339 ~------~~d~p~~~~v~~i~l~~GD~LVLaSDGLwD~l~~eeI~~iv~~~~~-~~~~~q~~A~~Lv~~A~~~a~d~~~~ 411 (446)
. ..|.|...++..+++++||+|||+||||||||.+++|..++..... ...++|.+|++|++.|+++++|++++
T Consensus 222 p~~~~~~~~d~p~~ad~~~~~v~~GDvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~ 301 (330)
T KOG1379|consen 222 PEGYSSYISDVPDSADVTSFDVQKGDVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQ 301 (330)
T ss_pred CccccccccCCccccceEEEeccCCCEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcC
Confidence 4 4678888999999999999999999999999999999999988765 56789999999999999999999999
Q ss_pred CccchhhhhccccCCCCCCCCeEEEEEEe
Q 013301 412 TPFSTAAQDAGFRYYGGKLDDITVIVSYI 440 (446)
Q Consensus 412 ~p~~~~a~~~g~~~~GGs~DNITVIVV~i 440 (446)
+||+.+|+++|++++||+.|||||||+++
T Consensus 302 SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 302 SPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred ChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 99999999999999999999999999864
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=1.1e-33 Score=289.89 Aligned_cols=208 Identities=19% Similarity=0.245 Sum_probs=159.1
Q ss_pred EEecccCCCCccCCCceEEEecC--------------CeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 013301 204 SCYLPHPAKEETGGEDAHFICGD--------------EQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHAI 269 (446)
Q Consensus 204 ~~~~s~~Gk~R~~NEDa~~v~~~--------------~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~~~ 269 (446)
....+++|. |+.|||++++.++ ..+|+|||||||+. +|++|++.+...+.. ......
T Consensus 67 ~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~-----age~as~~l~~~i~~---~~~~~~ 137 (365)
T PLN03145 67 SGAWADIGS-RSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKH-----AADFACYHLPRFIVE---DEDFPR 137 (365)
T ss_pred EEEEccccC-CCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHH-----HHHHHHHHHHHHHHh---hhccch
Confidence 455789996 9999999987542 36899999999998 999999887665432 211223
Q ss_pred CHHHHHHHHHHcc------------CcCCCceEEEEEEeCCeEEEEEECCCcEEEEeCCeEEEcCccccccc--------
Q 013301 270 DPARVLEKAHSST------------KAKGSSTACIIALTSKAIHAVNLGDSGFMVVRDGCTIFQSPVQQHGF-------- 329 (446)
Q Consensus 270 ~~~~~L~~A~~~~------------~~~GgSTavvavI~~~~l~vaNVGDSRayLiR~g~iv~~S~~q~~~~-------- 329 (446)
+++++|++++.++ ....|||+++++|.++.++++||||||+|++|+|+.+.+|.+|....
T Consensus 138 ~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~ 217 (365)
T PLN03145 138 EIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIE 217 (365)
T ss_pred hHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHH
Confidence 4556666665432 12357999999999999999999999999999999887776653210
Q ss_pred -----------cccccccccCCC------------CCCCcceEEEEecCCCC-EEEEEccCCCCCCCHHHHHHHHHHHHh
Q 013301 330 -----------NFTYQLESGNTG------------DLPSSGQVFTIPAAPGD-VIVAGTDGLFDNLYNNEVTAVVVHALR 385 (446)
Q Consensus 330 -----------n~p~qL~~g~~~------------d~p~~~~v~~i~l~~GD-~LVLaSDGLwD~l~~eeI~~iv~~~~~ 385 (446)
+....+++..+. ....+|++..++++++| |||||||||||+|+++++++++.+.+.
T Consensus 218 ~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~ 297 (365)
T PLN03145 218 ASGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQ 297 (365)
T ss_pred HcCCceecceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHh
Confidence 011113332221 12357899999999888 467999999999999999999988776
Q ss_pred CCCCHHHHHHHHHHHHHHhhccccCCCccchhhhhccccCCCCCCCCeEEEEEEeCCC
Q 013301 386 AGLGPQVTAQKIAALARQRAQDRNRQTPFSTAAQDAGFRYYGGKLDDITVIVSYISGH 443 (446)
Q Consensus 386 ~~~~~q~~A~~Lv~~A~~~a~d~~~~~p~~~~a~~~g~~~~GGs~DNITVIVV~i~~~ 443 (446)
...+|+++|+.|+++|+.+ |+.||||||||++...
T Consensus 298 ~~~~p~~aa~~Lv~~Al~r-----------------------gs~DNITvIVV~l~~~ 332 (365)
T PLN03145 298 EHNDPVMCSKELVDEALKR-----------------------KSGDNLAVVVVCFQSQ 332 (365)
T ss_pred cCCCHHHHHHHHHHHHHhC-----------------------CCCCCEEEEEEEeecC
Confidence 6678999999999999997 8899999999999853
No 3
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=277.25 Aligned_cols=210 Identities=24% Similarity=0.356 Sum_probs=161.0
Q ss_pred EEEEecccCCCCccCCCceEEEecCC-----eEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCC--HHH
Q 013301 202 SGSCYLPHPAKEETGGEDAHFICGDE-----QVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEES-THAID--PAR 273 (446)
Q Consensus 202 ~g~~~~s~~Gk~R~~NEDa~~v~~~~-----~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~-~~~~~--~~~ 273 (446)
...++++++|..|..|||++++..+. .+++||||||||+ +|++|++++.+.+.....+. ..... ..+
T Consensus 8 ~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~-----~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~ 82 (262)
T COG0631 8 LKVAGLSDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHA-----AGEVASKLAVEALARLFDETNFNSLNESLEE 82 (262)
T ss_pred eeeeeeccCCCccCCCCcceeeccccCCcceeEEEEEeCccchh-----HHHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 34456899999999999999998532 3999999999999 99999998887776654432 22222 345
Q ss_pred HHHHHHHcc------------CcCCC-ceEEEEEEeCCeEEEEEECCCcEEEEeCCeEEEcCccccc-------------
Q 013301 274 VLEKAHSST------------KAKGS-STACIIALTSKAIHAVNLGDSGFMVVRDGCTIFQSPVQQH------------- 327 (446)
Q Consensus 274 ~L~~A~~~~------------~~~Gg-STavvavI~~~~l~vaNVGDSRayLiR~g~iv~~S~~q~~------------- 327 (446)
.|.+++... ...++ ||++++++.+++++++||||||+|++|+|.+...|.+|..
T Consensus 83 ~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~ 162 (262)
T COG0631 83 LLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPE 162 (262)
T ss_pred HHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHH
Confidence 555443211 12333 5555666778899999999999999999998887776642
Q ss_pred -ccccccc--ccccCCCCCCCcceEEEEecCCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 013301 328 -GFNFTYQ--LESGNTGDLPSSGQVFTIPAAPGDVIVAGTDGLFDNLYNNEVTAVVVHALRAGLGPQVTAQKIAALARQR 404 (446)
Q Consensus 328 -~~n~p~q--L~~g~~~d~p~~~~v~~i~l~~GD~LVLaSDGLwD~l~~eeI~~iv~~~~~~~~~~q~~A~~Lv~~A~~~ 404 (446)
...+|.. +++..+.....+|++...+++++|++|||||||||.+++++|.++++. ..++++++++|++.|.+.
T Consensus 163 ~~~~~~~~~~ltralG~~~~~~p~~~~~~~~~~d~llL~SDGl~d~v~~~~i~~il~~----~~~~~~~~~~li~~a~~~ 238 (262)
T COG0631 163 EARSHPRRNALTRALGDFDLLEPDITELELEPGDFLLLCSDGLWDVVSDDEIVDILKN----SETPQEAADKLIELALEG 238 (262)
T ss_pred HHHhCccchhhhhhcCCCcccceeEEEEEcCCCCEEEEECCCCccCcCHHHHHHHHhc----CCCHHHHHHHHHHHHHhc
Confidence 1123332 344333333368999999999999999999999999999999999985 368999999999999996
Q ss_pred hccccCCCccchhhhhccccCCCCCCCCeEEEEEEeCCC
Q 013301 405 AQDRNRQTPFSTAAQDAGFRYYGGKLDDITVIVSYISGH 443 (446)
Q Consensus 405 a~d~~~~~p~~~~a~~~g~~~~GGs~DNITVIVV~i~~~ 443 (446)
|+.||||+|+|++...
T Consensus 239 -----------------------g~~DNiT~ilv~~~~~ 254 (262)
T COG0631 239 -----------------------GGPDNITVVLVRLNGE 254 (262)
T ss_pred -----------------------CCCCceEEEEEEeecc
Confidence 9999999999998754
No 4
>PTZ00224 protein phosphatase 2C; Provisional
Probab=99.97 E-value=1.2e-30 Score=268.59 Aligned_cols=207 Identities=21% Similarity=0.267 Sum_probs=149.4
Q ss_pred ecccCCCCccCCCceEEEec--CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--CCHHHHHHHHHH-
Q 013301 206 YLPHPAKEETGGEDAHFICG--DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHA--IDPARVLEKAHS- 280 (446)
Q Consensus 206 ~~s~~Gk~R~~NEDa~~v~~--~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~~--~~~~~~L~~A~~- 280 (446)
+.+++|. |+.|||++++.. +..+|+|||||||.. +++++.+.+...+ ....... ....+++..+.+
T Consensus 26 ~~s~~G~-R~~nED~~~v~~~~~~~lfgVfDGHgG~~-----~S~~~~~~l~~~l---~~~~~~~~~~~l~~a~~~~d~~ 96 (381)
T PTZ00224 26 SACVNGY-RESMEDAHLLYLTDDWGFFGVFDGHVNDE-----CSQYLARAWPQAL---EKEPEPMTDERMEELCLEIDEE 96 (381)
T ss_pred EEeCCCC-CCCCCCeeEeccCCCceEEEEEeCCCcHH-----HHHHHHHHHHHHH---HhccccccHHHHHHHHHHHHHH
Confidence 4678897 889999988643 447999999999876 6777666554332 2221110 012233333222
Q ss_pred --ccCcCCCceEEEEEEe-CCeEEEEEECCCcEEEEeCCeEEEcCcccccc-------------ccccc------ccccc
Q 013301 281 --STKAKGSSTACIIALT-SKAIHAVNLGDSGFMVVRDGCTIFQSPVQQHG-------------FNFTY------QLESG 338 (446)
Q Consensus 281 --~~~~~GgSTavvavI~-~~~l~vaNVGDSRayLiR~g~iv~~S~~q~~~-------------~n~p~------qL~~g 338 (446)
+....+|||+++++|. +++++|+||||||+|++|+|+++.+|.+|... ...+. .+++.
T Consensus 97 i~~~~~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~Rv~G~l~vTRa 176 (381)
T PTZ00224 97 WMDSGREGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVVSNRVDGDLAVSRA 176 (381)
T ss_pred HHhcccCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEeccccccCceeeecc
Confidence 2233567899888776 57899999999999999999988777666321 11111 23332
Q ss_pred CCCC--------------CCCcceEEEEecCCCCEEEEEccCCCC-CCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 013301 339 NTGD--------------LPSSGQVFTIPAAPGDVIVAGTDGLFD-NLYNNEVTAVVVHALRAGLGPQVTAQKIAALARQ 403 (446)
Q Consensus 339 ~~~d--------------~p~~~~v~~i~l~~GD~LVLaSDGLwD-~l~~eeI~~iv~~~~~~~~~~q~~A~~Lv~~A~~ 403 (446)
.+.. +..+|++..++++++|+|||||||||| .++++||.+++.+.+....+++++|+.|+++|+.
T Consensus 177 lGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~ 256 (381)
T PTZ00224 177 FGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSNDFIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIR 256 (381)
T ss_pred cCCcccccccccccccCcceeeeEEEEEECCCCCEEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh
Confidence 2110 114689999999999999999999999 8999999999987666667899999999999999
Q ss_pred hhccccCCCccchhhhhccccCCCCCCCCeEEEEEEeCCCC
Q 013301 404 RAQDRNRQTPFSTAAQDAGFRYYGGKLDDITVIVSYISGHA 444 (446)
Q Consensus 404 ~a~d~~~~~p~~~~a~~~g~~~~GGs~DNITVIVV~i~~~~ 444 (446)
+ |+.||||||||++....
T Consensus 257 r-----------------------Gs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 257 R-----------------------GSKDNISCLIVQLKDGA 274 (381)
T ss_pred c-----------------------CCCCCEEEEEEEeeCCC
Confidence 7 89999999999998653
No 5
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.97 E-value=4.3e-30 Score=278.55 Aligned_cols=215 Identities=18% Similarity=0.217 Sum_probs=153.2
Q ss_pred EEEEecccCCCCccCCCceEEEec--------------CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-C
Q 013301 202 SGSCYLPHPAKEETGGEDAHFICG--------------DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEES-T 266 (446)
Q Consensus 202 ~g~~~~s~~Gk~R~~NEDa~~v~~--------------~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~-~ 266 (446)
+..++.+|+|++|+.|||++.+.. +..+|+|||||||+. +|++|++++.+.+..+.... .
T Consensus 375 l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~-----~GevAS~lAv~~L~~~~~~~~~ 449 (645)
T PRK14559 375 LEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHA-----AGEVASALAVETLQQYFQQHWQ 449 (645)
T ss_pred EEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCch-----hHHHHHHHHHHHHHHHHHhhhc
Confidence 345668999999999999987653 246899999999999 99999998877665433221 1
Q ss_pred CCCCHHHHHHHH----HHcc-----------CcCCCceEEEEEEeCCeEEEEEECCCcEEEE-eCCeEEEcCcccccc--
Q 013301 267 HAIDPARVLEKA----HSST-----------KAKGSSTACIIALTSKAIHAVNLGDSGFMVV-RDGCTIFQSPVQQHG-- 328 (446)
Q Consensus 267 ~~~~~~~~L~~A----~~~~-----------~~~GgSTavvavI~~~~l~vaNVGDSRayLi-R~g~iv~~S~~q~~~-- 328 (446)
......+.|+++ +... ....|||++++++.+++++++||||||+|++ |+|+++..|.+|...
T Consensus 450 ~~~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~ 529 (645)
T PRK14559 450 DELPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQR 529 (645)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHH
Confidence 112223333333 2221 1124688888999999999999999999998 567888777766421
Q ss_pred -----------ccccc--cccccCCCC--CCCcceEEEEecCCCCEEEEEccCCCCC-CCHHHHHHHHHHHHhCCCCHHH
Q 013301 329 -----------FNFTY--QLESGNTGD--LPSSGQVFTIPAAPGDVIVAGTDGLFDN-LYNNEVTAVVVHALRAGLGPQV 392 (446)
Q Consensus 329 -----------~n~p~--qL~~g~~~d--~p~~~~v~~i~l~~GD~LVLaSDGLwD~-l~~eeI~~iv~~~~~~~~~~q~ 392 (446)
..+|. .|++..+.. ...+|++..+++++||+||||||||||+ +-+.++.+.+...+....++++
T Consensus 530 lv~~Gi~~~~a~~~p~~~~LTrALG~~~~~~l~Pdi~~~~L~~gD~lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~ 609 (645)
T PRK14559 530 EIQRGVEPQIAYARPDAYQLTQALGPRDNSAIQPDIQFLEIEEDTLLLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQ 609 (645)
T ss_pred HHHhCCCHHHHhcCcccceeeeccCCCCCCcccceEEEEEcCCCCEEEEECCCCCCCcccchHHHHHHHHHHhcCCCHHH
Confidence 12232 244433322 1246899999999999999999999995 3333333344444445578999
Q ss_pred HHHHHHHHHHHhhccccCCCccchhhhhccccCCCCCCCCeEEEEEEeCCCC
Q 013301 393 TAQKIAALARQRAQDRNRQTPFSTAAQDAGFRYYGGKLDDITVIVSYISGHA 444 (446)
Q Consensus 393 ~A~~Lv~~A~~~a~d~~~~~p~~~~a~~~g~~~~GGs~DNITVIVV~i~~~~ 444 (446)
+|++|++.|+.+ |+.||||+|||++....
T Consensus 610 aa~~Li~~Al~~-----------------------gg~DNITvIvV~l~~~p 638 (645)
T PRK14559 610 GLNKLIDLANQY-----------------------NGHDNITAILVRLKVRP 638 (645)
T ss_pred HHHHHHHHHHHc-----------------------CCCCcEEEEEEEeccCC
Confidence 999999999987 88999999999998654
No 6
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.97 E-value=1.3e-29 Score=242.83 Aligned_cols=207 Identities=27% Similarity=0.347 Sum_probs=155.2
Q ss_pred EecccCCCCccCCCceEEEec-----CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--CCCHHHHHHH
Q 013301 205 CYLPHPAKEETGGEDAHFICG-----DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTH--AIDPARVLEK 277 (446)
Q Consensus 205 ~~~s~~Gk~R~~NEDa~~v~~-----~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~--~~~~~~~L~~ 277 (446)
++.+..++.|+.|||++++.. +..+|+|||||||+. .+++|++++...+......... ...+...|++
T Consensus 3 ~~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~-----~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 77 (254)
T cd00143 3 AGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHA-----AGEFASKLLVEELLEELEETLTLSEEDIEEALRK 77 (254)
T ss_pred eeeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHH-----HHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Confidence 345667777889999999876 448999999999998 8999988887766544332211 2233444444
Q ss_pred HHHcc-------------CcCCCceEEEEEEeCCeEEEEEECCCcEEEEeCCeEEEcCccccccc---------------
Q 013301 278 AHSST-------------KAKGSSTACIIALTSKAIHAVNLGDSGFMVVRDGCTIFQSPVQQHGF--------------- 329 (446)
Q Consensus 278 A~~~~-------------~~~GgSTavvavI~~~~l~vaNVGDSRayLiR~g~iv~~S~~q~~~~--------------- 329 (446)
++... ....|||++++++.++.++++|+||||+|++|+++++..+.+|....
T Consensus 78 ~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~ 157 (254)
T cd00143 78 AFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS 157 (254)
T ss_pred HHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE
Confidence 43321 14567899999999999999999999999999999887776654321
Q ss_pred --ccccc--ccccCCCC-----CCCcceEEEEec-CCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 013301 330 --NFTYQ--LESGNTGD-----LPSSGQVFTIPA-APGDVIVAGTDGLFDNLYNNEVTAVVVHALRAGLGPQVTAQKIAA 399 (446)
Q Consensus 330 --n~p~q--L~~g~~~d-----~p~~~~v~~i~l-~~GD~LVLaSDGLwD~l~~eeI~~iv~~~~~~~~~~q~~A~~Lv~ 399 (446)
+.|.+ +++..+.. ...+|++..+++ +++|+||||||||||++++++|.+++...... .+++++|++|++
T Consensus 158 ~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~-~~~~~~a~~l~~ 236 (254)
T cd00143 158 NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAK-EDLQEAAQELVD 236 (254)
T ss_pred eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcc-cCHHHHHHHHHH
Confidence 12222 33322222 245788999999 99999999999999999999999999875111 279999999999
Q ss_pred HHHHhhccccCCCccchhhhhccccCCCCCCCCeEEEEEEe
Q 013301 400 LARQRAQDRNRQTPFSTAAQDAGFRYYGGKLDDITVIVSYI 440 (446)
Q Consensus 400 ~A~~~a~d~~~~~p~~~~a~~~g~~~~GGs~DNITVIVV~i 440 (446)
.|... ++.||+|+||+++
T Consensus 237 ~a~~~-----------------------~~~Dn~t~i~~~~ 254 (254)
T cd00143 237 LALRR-----------------------GSHDNITVVVVRL 254 (254)
T ss_pred HHHhC-----------------------CCCCCEEEEEEeC
Confidence 99986 7889999999975
No 7
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.96 E-value=3.3e-28 Score=234.12 Aligned_cols=202 Identities=27% Similarity=0.334 Sum_probs=152.1
Q ss_pred ccCCCCccCCCceEEEec----CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHcc
Q 013301 208 PHPAKEETGGEDAHFICG----DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTH-AIDPARVLEKAHSST 282 (446)
Q Consensus 208 s~~Gk~R~~NEDa~~v~~----~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~-~~~~~~~L~~A~~~~ 282 (446)
++.++.|..|||++++.. +..+|+|||||||.. +++++++.+...+......... ...+.++|++++...
T Consensus 11 ~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (255)
T smart00332 11 SSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSE-----AAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKT 85 (255)
T ss_pred ecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHH-----HHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHH
Confidence 567888999999999874 356999999999987 8999988777655543322111 123556666654432
Q ss_pred -------------CcCCCceEEEEEEeCCeEEEEEECCCcEEEEeCCeEEEcCccccc-------------------ccc
Q 013301 283 -------------KAKGSSTACIIALTSKAIHAVNLGDSGFMVVRDGCTIFQSPVQQH-------------------GFN 330 (446)
Q Consensus 283 -------------~~~GgSTavvavI~~~~l~vaNVGDSRayLiR~g~iv~~S~~q~~-------------------~~n 330 (446)
....+||++++++..+.++++|+||||+|++|++++..+|.+|.. ..+
T Consensus 86 ~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~~~~ 165 (255)
T smart00332 86 DEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVINGRVN 165 (255)
T ss_pred HHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEECCeEC
Confidence 123578999999999999999999999999999998777776654 122
Q ss_pred ccccccccCCCC-----CCCcceEEEEec-CCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 013301 331 FTYQLESGNTGD-----LPSSGQVFTIPA-APGDVIVAGTDGLFDNLYNNEVTAVVVHALRAGLGPQVTAQKIAALARQR 404 (446)
Q Consensus 331 ~p~qL~~g~~~d-----~p~~~~v~~i~l-~~GD~LVLaSDGLwD~l~~eeI~~iv~~~~~~~~~~q~~A~~Lv~~A~~~ 404 (446)
....+++..+.. +..+|++...++ +++|+||||||||||++++++|.+++.+.... .+++++|+.|++.|..+
T Consensus 166 ~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~-~~~~~~~~~l~~~a~~~ 244 (255)
T smart00332 166 GVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSK-SDPEEAAKRLIDLALAR 244 (255)
T ss_pred CeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHc
Confidence 223344433222 124678888885 99999999999999999999999999876321 26999999999999985
Q ss_pred hccccCCCccchhhhhccccCCCCCCCCeEEEEE
Q 013301 405 AQDRNRQTPFSTAAQDAGFRYYGGKLDDITVIVS 438 (446)
Q Consensus 405 a~d~~~~~p~~~~a~~~g~~~~GGs~DNITVIVV 438 (446)
+..||+|+||+
T Consensus 245 -----------------------~~~Dn~T~ivv 255 (255)
T smart00332 245 -----------------------GSKDNITVIVV 255 (255)
T ss_pred -----------------------CCCCCeEEEEC
Confidence 88899999985
No 8
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=5.2e-27 Score=238.20 Aligned_cols=207 Identities=23% Similarity=0.305 Sum_probs=153.5
Q ss_pred CCCCccCCCceEEEec-----------CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHH
Q 013301 210 PAKEETGGEDAHFICG-----------DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHAIDPARVLEKA 278 (446)
Q Consensus 210 ~Gk~R~~NEDa~~v~~-----------~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~~~~~~~~L~~A 278 (446)
.++.|..+||++.... ...+|||||||||.. +++++++.+...+...........+.+++++++
T Consensus 47 ~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~-----~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~ 121 (330)
T KOG0698|consen 47 IRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDL-----AAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRA 121 (330)
T ss_pred cCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHH-----HHHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence 3455778999988753 247999999999998 999998766554433222211112477888888
Q ss_pred HH-cc----------CcCCCceEEEEEEeCC-eEEEEEECCCcEEEEeCC-eEEEcCcccccc-----------------
Q 013301 279 HS-ST----------KAKGSSTACIIALTSK-AIHAVNLGDSGFMVVRDG-CTIFQSPVQQHG----------------- 328 (446)
Q Consensus 279 ~~-~~----------~~~GgSTavvavI~~~-~l~vaNVGDSRayLiR~g-~iv~~S~~q~~~----------------- 328 (446)
|. ++ ...+|+|++++++.++ ++||+|+||||++|++.| ..+.+|.+|...
T Consensus 122 F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~ 201 (330)
T KOG0698|consen 122 FLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSN 201 (330)
T ss_pred HHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEE
Confidence 87 33 2567899999888855 999999999999999876 566666555320
Q ss_pred cccccc----c--cccC-----C-CCCCCcceEEEEecCC-CCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHH
Q 013301 329 FNFTYQ----L--ESGN-----T-GDLPSSGQVFTIPAAP-GDVIVAGTDGLFDNLYNNEVTAVVVHALRAGLGPQVTAQ 395 (446)
Q Consensus 329 ~n~p~q----L--~~g~-----~-~d~p~~~~v~~i~l~~-GD~LVLaSDGLwD~l~~eeI~~iv~~~~~~~~~~q~~A~ 395 (446)
...+.+ | +++. . .....+|++...++.+ .+||||+||||||+++++|++++|+..+.....+..++.
T Consensus 202 ~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~ 281 (330)
T KOG0698|consen 202 WGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAK 281 (330)
T ss_pred cCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHH
Confidence 000111 1 2211 1 2234578999888887 669999999999999999999999987544568899999
Q ss_pred HHHHHHHHhhccccCCCccchhhhhccccCCCCCCCCeEEEEEEeCCCC
Q 013301 396 KIAALARQRAQDRNRQTPFSTAAQDAGFRYYGGKLDDITVIVSYISGHA 444 (446)
Q Consensus 396 ~Lv~~A~~~a~d~~~~~p~~~~a~~~g~~~~GGs~DNITVIVV~i~~~~ 444 (446)
.|.+.|..+ |+.||||||||.|....
T Consensus 282 ~l~~~a~~~-----------------------~s~DnitvvvV~l~~~~ 307 (330)
T KOG0698|consen 282 LLATEALSR-----------------------GSKDNITVVVVRLKSSP 307 (330)
T ss_pred HHHHHHhhc-----------------------CCCCCeEEEEEEecCcc
Confidence 999999987 99999999999998764
No 9
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=99.95 E-value=2.4e-28 Score=238.21 Aligned_cols=191 Identities=25% Similarity=0.336 Sum_probs=138.8
Q ss_pred ccCCCCccCCCceEEEec---------CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHH
Q 013301 208 PHPAKEETGGEDAHFICG---------DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHAIDPARVLEKA 278 (446)
Q Consensus 208 s~~Gk~R~~NEDa~~v~~---------~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~~~~~~~~L~~A 278 (446)
+...+.|+.|||++++.. +..+|+|||||||.. ++++++..+...+......... .++.++|.++
T Consensus 5 ~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~-----~a~~~~~~l~~~l~~~~~~~~~-~~~~~al~~a 78 (254)
T PF00481_consen 5 SSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSE-----AAEYASQNLPEFLKENLSFNDG-NDIEEALRQA 78 (254)
T ss_dssp EEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSH-----HHHHHHHHHHHHHHHHHHHHTC-HHHHHHHHHH
T ss_pred ecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChh-----hHHHHHHHHHHHHHhhcccccc-cchhhcccce
Confidence 444567999999999864 357999999999998 9999998887655544332211 1456666665
Q ss_pred HHc-------------cCcCCCceEEEEEEeCCeEEEEEECCCcEEEEeCCeEE-EcCcccccc----------------
Q 013301 279 HSS-------------TKAKGSSTACIIALTSKAIHAVNLGDSGFMVVRDGCTI-FQSPVQQHG---------------- 328 (446)
Q Consensus 279 ~~~-------------~~~~GgSTavvavI~~~~l~vaNVGDSRayLiR~g~iv-~~S~~q~~~---------------- 328 (446)
+.. ....+|||+++++|.++++|++||||||+||++++... .+|.+|...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~ 158 (254)
T PF00481_consen 79 FLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVS 158 (254)
T ss_dssp HHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEE
T ss_pred eeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeeccccccc
Confidence 554 23467899999999999999999999999999999887 777665321
Q ss_pred ----ccccccccccC-----C----CCCCCcceEEEEecCCCC-EEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHH
Q 013301 329 ----FNFTYQLESGN-----T----GDLPSSGQVFTIPAAPGD-VIVAGTDGLFDNLYNNEVTAVVVHALRAGLGPQVTA 394 (446)
Q Consensus 329 ----~n~p~qL~~g~-----~----~d~p~~~~v~~i~l~~GD-~LVLaSDGLwD~l~~eeI~~iv~~~~~~~~~~q~~A 394 (446)
.+...++++.. . ..+..+|++..+++.++| +||||||||||+|+++|+.+++.+....+.+|+.+|
T Consensus 159 ~~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a 238 (254)
T PF00481_consen 159 ENGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAA 238 (254)
T ss_dssp ETEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred cchhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHH
Confidence 01111122211 0 122357999999999997 999999999999999999999998866555799999
Q ss_pred HHHHHHHHHh
Q 013301 395 QKIAALARQR 404 (446)
Q Consensus 395 ~~Lv~~A~~~ 404 (446)
+.|+++|+.+
T Consensus 239 ~~L~~~A~~~ 248 (254)
T PF00481_consen 239 EKLVDEAIAR 248 (254)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999997
No 10
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-26 Score=223.99 Aligned_cols=217 Identities=18% Similarity=0.254 Sum_probs=154.1
Q ss_pred eEEEEEEEecccCCCCccCCCceEEEe-------cCCeEEEEEeCCCCCCCCCCCHHHHHHHHH-HHHHH--HHHhhcC-
Q 013301 198 LKLLSGSCYLPHPAKEETGGEDAHFIC-------GDEQVIGVADGVGGWADVGVDAGEFARELM-SHSFR--AVQEEST- 266 (446)
Q Consensus 198 l~l~~g~~~~s~~Gk~R~~NEDa~~v~-------~~~~lfaVaDGhGG~~~~G~~age~As~l~-~~~~~--~l~~~~~- 266 (446)
..|.+|..+ ..+-|-++||++... ++..+|||||||.|+. .+.++++.+ ..++. .+.....
T Consensus 20 Nglryg~SS---MQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~-----va~~c~~hLlehi~sse~F~~~~k~ 91 (379)
T KOG0697|consen 20 NGLRYGVSS---MQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQ-----VANHCAEHLLEHIISSEEFRGMTKN 91 (379)
T ss_pred Cceeeeecc---ccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchH-----HHHHHHHHHHHHhhhhHHHhhhccC
Confidence 445666533 345789999999864 2678999999999988 777776543 33322 1211110
Q ss_pred C-CCCHHHHHHHHHHc-----------c--CcCCCceEEEEEEeCCeEEEEEECCCcEEEEeCCeEEEcCccccc-----
Q 013301 267 H-AIDPARVLEKAHSS-----------T--KAKGSSTACIIALTSKAIHAVNLGDSGFMVVRDGCTIFQSPVQQH----- 327 (446)
Q Consensus 267 ~-~~~~~~~L~~A~~~-----------~--~~~GgSTavvavI~~~~l~vaNVGDSRayLiR~g~iv~~S~~q~~----- 327 (446)
. ..+.+.-|+..|.+ . ...+|||++.+++...++|++|+||||++|+|+|+.++-|.+|..
T Consensus 92 gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~E 171 (379)
T KOG0697|consen 92 GSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKE 171 (379)
T ss_pred CcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHH
Confidence 0 01222233333221 1 245889999999999999999999999999999998876665532
Q ss_pred --------------cccccccccccC-----------C---CCCCCcceEEEEecC-CCCEEEEEccCCCCCCCHHHHHH
Q 013301 328 --------------GFNFTYQLESGN-----------T---GDLPSSGQVFTIPAA-PGDVIVAGTDGLFDNLYNNEVTA 378 (446)
Q Consensus 328 --------------~~n~p~qL~~g~-----------~---~d~p~~~~v~~i~l~-~GD~LVLaSDGLwD~l~~eeI~~ 378 (446)
..|....++++. + .-..++|++..+.-. ++|||||+||||||+|+++|+++
T Consensus 172 keRIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelce 251 (379)
T KOG0697|consen 172 KERIQNAGGSVMIQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCE 251 (379)
T ss_pred HHHHhcCCCeEEEEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHH
Confidence 122222222110 0 012247888877754 56799999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHhhccccCCCccchhhhhccccCCCCCCCCeEEEEEEeCCCCC
Q 013301 379 VVVHALRAGLGPQVTAQKIAALARQRAQDRNRQTPFSTAAQDAGFRYYGGKLDDITVIVSYISGHAS 445 (446)
Q Consensus 379 iv~~~~~~~~~~q~~A~~Lv~~A~~~a~d~~~~~p~~~~a~~~g~~~~GGs~DNITVIVV~i~~~~~ 445 (446)
+|+..++-..++.++|+.+++.++.+ |++||+|+|+|.+.....
T Consensus 252 fv~sRl~Vt~dL~~vcn~VvDtCLhK-----------------------GSRDNMsivlvcfp~APk 295 (379)
T KOG0697|consen 252 FVKSRLEVTSDLEEVCNDVVDTCLHK-----------------------GSRDNMSIVLVCFPGAPK 295 (379)
T ss_pred HHHhhheecccHHHHHHHHHHHHHhc-----------------------cCccCceEEEEecCCCCC
Confidence 99998888889999999999999997 999999999999976543
No 11
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.86 E-value=6.1e-21 Score=189.96 Aligned_cols=141 Identities=20% Similarity=0.291 Sum_probs=110.6
Q ss_pred CCceEEEEEEeCCeEEEEEECCCcEEEEeCCeEEEcCccccc--------------------cccccccccccC------
Q 013301 286 GSSTACIIALTSKAIHAVNLGDSGFMVVRDGCTIFQSPVQQH--------------------GFNFTYQLESGN------ 339 (446)
Q Consensus 286 GgSTavvavI~~~~l~vaNVGDSRayLiR~g~iv~~S~~q~~--------------------~~n~p~qL~~g~------ 339 (446)
.|||+||+++.+++|+|+|.|||||+|.|+|+.++++.+|.. +.|.-..|++..
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNLSRA~GDHaYK 409 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNLSRAFGDHAYK 409 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccchhhhhhhhhhh
Confidence 479999999999999999999999999999999887766532 112222232211
Q ss_pred -CCCCC-------CcceEEEEecCCCC-EEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhccccC
Q 013301 340 -TGDLP-------SSGQVFTIPAAPGD-VIVAGTDGLFDNLYNNEVTAVVVHALRAGLGPQVTAQKIAALARQRAQDRNR 410 (446)
Q Consensus 340 -~~d~p-------~~~~v~~i~l~~GD-~LVLaSDGLwD~l~~eeI~~iv~~~~~~~~~~q~~A~~Lv~~A~~~a~d~~~ 410 (446)
...+| .-|+|....|+|.| |+|++|||||++|+.+|++++|+..+..+.....+|+.|.+.++.-..+-
T Consensus 410 ~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~G-- 487 (542)
T KOG0699|consen 410 KNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDG-- 487 (542)
T ss_pred cccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCC--
Confidence 11122 34889999998765 99999999999999999999999998888899999999999998743221
Q ss_pred CCccchhhhhccccCCCCCCCCeEEEEEEeCCC
Q 013301 411 QTPFSTAAQDAGFRYYGGKLDDITVIVSYISGH 443 (446)
Q Consensus 411 ~~p~~~~a~~~g~~~~GGs~DNITVIVV~i~~~ 443 (446)
.|-..||||||++.|++.
T Consensus 488 ---------------DGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 488 ---------------DGTGCDNMTVIITTFKRK 505 (542)
T ss_pred ---------------CCcCCCcceEEEEEeccc
Confidence 245679999999999854
No 12
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.82 E-value=2.1e-19 Score=182.39 Aligned_cols=184 Identities=21% Similarity=0.245 Sum_probs=122.3
Q ss_pred CCCceEEEe----cCCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHH-HHH-----------hhcC-------------
Q 013301 216 GGEDAHFIC----GDEQVIGVADGVGGWADVGVDAGEFARELMSHSFR-AVQ-----------EEST------------- 266 (446)
Q Consensus 216 ~NEDa~~v~----~~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~-~l~-----------~~~~------------- 266 (446)
..||.+-+. .+..++||+|||||.. ++++-+..+-..+. .+. .+..
T Consensus 84 ~~edrv~~~~s~~~~~~fvGIyDGhgGp~-----as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~ 158 (390)
T KOG0700|consen 84 AEEDRVSVAVSEENGWLFVGIYDGHGGPD-----ASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQ 158 (390)
T ss_pred cccCcceeeeeccCCeEEEEEecCCCCcc-----HHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhc
Confidence 346654322 3567899999999998 88888665544332 111 1100
Q ss_pred -----C-CCCHHHHHHHHHHcc-----------------CcCCCceEEEEEEeCCeEEEEEECCCcEEEEe---CCe---
Q 013301 267 -----H-AIDPARVLEKAHSST-----------------KAKGSSTACIIALTSKAIHAVNLGDSGFMVVR---DGC--- 317 (446)
Q Consensus 267 -----~-~~~~~~~L~~A~~~~-----------------~~~GgSTavvavI~~~~l~vaNVGDSRayLiR---~g~--- 317 (446)
. .....++|.+||+++ -...|++++++++.+..+||+|+|||||+|-+ ++.
T Consensus 159 ~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~ 238 (390)
T KOG0700|consen 159 LSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLV 238 (390)
T ss_pred ccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEE
Confidence 0 234567888887754 12346889999999999999999999999954 232
Q ss_pred EEEcCccccc---------ccccc----------cc-cc-----c-----------------------cCCCC---CCCc
Q 013301 318 TIFQSPVQQH---------GFNFT----------YQ-LE-----S-----------------------GNTGD---LPSS 346 (446)
Q Consensus 318 iv~~S~~q~~---------~~n~p----------~q-L~-----~-----------------------g~~~d---~p~~ 346 (446)
.+++|.+|.- ...+| ++ +| + ..... +..+
T Consensus 239 A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~Pyltae 318 (390)
T KOG0700|consen 239 AVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAE 318 (390)
T ss_pred EEecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceecc
Confidence 2444544311 00011 01 01 1 00011 1247
Q ss_pred ceEEEEecCCCC-EEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 013301 347 GQVFTIPAAPGD-VIVAGTDGLFDNLYNNEVTAVVVHALRAGLGPQVTAQKIAALARQR 404 (446)
Q Consensus 347 ~~v~~i~l~~GD-~LVLaSDGLwD~l~~eeI~~iv~~~~~~~~~~q~~A~~Lv~~A~~~ 404 (446)
|.++..+|.|.| ||||+||||||.|++||++.+|.+.+.....-+.+|+.|+++|+.+
T Consensus 319 P~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~ 377 (390)
T KOG0700|consen 319 PSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGR 377 (390)
T ss_pred ceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhh
Confidence 899999999988 8999999999999999999999986543233467999999999986
No 13
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.80 E-value=1.1e-18 Score=172.40 Aligned_cols=200 Identities=28% Similarity=0.348 Sum_probs=132.7
Q ss_pred CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHH-HH---hh---------------cC--------------CCCC--
Q 013301 226 DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRA-VQ---EE---------------ST--------------HAID-- 270 (446)
Q Consensus 226 ~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~-l~---~~---------------~~--------------~~~~-- 270 (446)
+..+|-+||||.|.+ ++.+|+.+....+.. +. +. +. ....
T Consensus 143 ~~~~~slfdghags~-----~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E 217 (493)
T KOG1323|consen 143 DGALFSLFDGHAGSA-----VAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHE 217 (493)
T ss_pred cceeeeeecCCCcch-----HHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchH
Confidence 578999999999998 999998887654321 11 11 00 0000
Q ss_pred --HHHHHHHHHHcc-----------CcCCCceEEEEEEeCCeEEEEEECCCcEEEEeCCeEEEcCccc----------cc
Q 013301 271 --PARVLEKAHSST-----------KAKGSSTACIIALTSKAIHAVNLGDSGFMVVRDGCTIFQSPVQ----------QH 327 (446)
Q Consensus 271 --~~~~L~~A~~~~-----------~~~GgSTavvavI~~~~l~vaNVGDSRayLiR~g~iv~~S~~q----------~~ 327 (446)
...+|+.||... ...||||+++++.--+++|++|.||||++++|+++++.++.+- +.
T Consensus 218 ~LViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPetERqRlQ~L 297 (493)
T KOG1323|consen 218 HLVIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPETERQRLQEL 297 (493)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHHHHHHHHHH
Confidence 123566666543 5679999999988889999999999999999999987655321 11
Q ss_pred cc-------------cccccc-----c--------------------------------------------ccCCC----
Q 013301 328 GF-------------NFTYQL-----E--------------------------------------------SGNTG---- 341 (446)
Q Consensus 328 ~~-------------n~p~qL-----~--------------------------------------------~g~~~---- 341 (446)
+| .+|.++ + +|.+.
T Consensus 298 af~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lk 377 (493)
T KOG1323|consen 298 AFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLK 377 (493)
T ss_pred hhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceee
Confidence 11 011110 0 01100
Q ss_pred ----CC------CCcceEEEEec-----CCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCC--CCH---HHHHHHHHHHH
Q 013301 342 ----DL------PSSGQVFTIPA-----APGDVIVAGTDGLFDNLYNNEVTAVVVHALRAG--LGP---QVTAQKIAALA 401 (446)
Q Consensus 342 ----d~------p~~~~v~~i~l-----~~GD~LVLaSDGLwD~l~~eeI~~iv~~~~~~~--~~~---q~~A~~Lv~~A 401 (446)
.+ ...|++...++ .++|++||+||||||+++++|+..+|++.+... .+| ..+|+.|+..|
T Consensus 378 v~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~a 457 (493)
T KOG1323|consen 378 VVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAA 457 (493)
T ss_pred eecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHh
Confidence 01 12355555444 578999999999999999999999999876542 233 46889999888
Q ss_pred HHhhccccCCCccchhhhhccccC---CCCCCCCeEEEEEEeCCC
Q 013301 402 RQRAQDRNRQTPFSTAAQDAGFRY---YGGKLDDITVIVSYISGH 443 (446)
Q Consensus 402 ~~~a~d~~~~~p~~~~a~~~g~~~---~GGs~DNITVIVV~i~~~ 443 (446)
+....| .||+. .-|+.|||||.||-+.-.
T Consensus 458 rg~~k~-------------rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 458 RGQQKD-------------RGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred cCccCC-------------CceeccCCCcCCCCceEEEEEeccCC
Confidence 875333 34432 126789999999987643
No 14
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.79 E-value=1.1e-17 Score=155.74 Aligned_cols=174 Identities=21% Similarity=0.226 Sum_probs=123.6
Q ss_pred cccCCCCccCCCceEEEec---CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcc-
Q 013301 207 LPHPAKEETGGEDAHFICG---DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHAIDPARVLEKAHSST- 282 (446)
Q Consensus 207 ~s~~Gk~R~~NEDa~~v~~---~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~~~~~~~~L~~A~~~~- 282 (446)
+.+|+ ...+.|.|.+.. +..+++|+||||+.. ++.+++..+...+...... ...+.++++..++..
T Consensus 9 ~~~p~--~~~~GD~~~~~~~~~~~~~~~v~Dg~G~G~-----~aa~~s~~~~~~~~~~~~~---~~~~~~~l~~~n~~l~ 78 (193)
T smart00331 9 YYEDA--TQVGGDFYDVVKLPEGRLLIAIADVMGKGL-----AAALAMSMARSALRTLLSE---GISLSQILERLNRAIY 78 (193)
T ss_pred EEcch--HhcCccEEEEEEeCCCeEEEEEEecCCCCh-----HHHHHHHHHHHHHHHHhhc---CCCHHHHHHHHHHHHH
Confidence 44555 457889886653 357899999999654 5666655555555444332 345777777766543
Q ss_pred ---CcCCCceEEEEEE--eCCeEEEEEECCCcEEEEe-CCeEEEcCccccccccccccccccCCCCCCCcceEEEEecCC
Q 013301 283 ---KAKGSSTACIIAL--TSKAIHAVNLGDSGFMVVR-DGCTIFQSPVQQHGFNFTYQLESGNTGDLPSSGQVFTIPAAP 356 (446)
Q Consensus 283 ---~~~GgSTavvavI--~~~~l~vaNVGDSRayLiR-~g~iv~~S~~q~~~~n~p~qL~~g~~~d~p~~~~v~~i~l~~ 356 (446)
....++|++++++ ..++++++|+||+|+|+++ ++..+..+... ...||. ..+ .+++...+++++
T Consensus 79 ~~~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~------~~~lG~--~~~--~~~~~~~~~l~~ 148 (193)
T smart00331 79 ENGEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL------GAPLGL--EPD--VEVDVRELTLEP 148 (193)
T ss_pred hcCCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC------Cceeee--CCC--CcceeEEEeeCC
Confidence 2335688888888 4668999999999999999 55544333221 112332 112 246788899999
Q ss_pred CCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 013301 357 GDVIVAGTDGLFDNLYNNEVTAVVVHALRAGLGPQVTAQKIAALAR 402 (446)
Q Consensus 357 GD~LVLaSDGLwD~l~~eeI~~iv~~~~~~~~~~q~~A~~Lv~~A~ 402 (446)
||+|+|+||||||.++++++.+++.+.. ..++++++++|++++.
T Consensus 149 gd~l~l~TDGl~e~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 149 GDLLLLYTDGLTEARNPERLEELLEELL--GSPPAEIAQRILEELL 192 (193)
T ss_pred CCEEEEECCCccccCChHHHHHHHHHhc--CCCHHHHHHHHHHHHh
Confidence 9999999999999999999999998863 4579999999988764
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.77 E-value=3.8e-18 Score=161.01 Aligned_cols=170 Identities=25% Similarity=0.280 Sum_probs=95.7
Q ss_pred cccCCCCccCCCceEEEec--CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC---HHHHHH----H
Q 013301 207 LPHPAKEETGGEDAHFICG--DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHAID---PARVLE----K 277 (446)
Q Consensus 207 ~s~~Gk~R~~NEDa~~v~~--~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~~~~---~~~~L~----~ 277 (446)
.+|.++ +..|||++.+.. +..+++|||||||.. .++.+++++.+.+............ .+++++ +
T Consensus 3 ~sh~~~-~~~nqD~~~~~~~~~~~~~aVaDG~g~~~-----~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 76 (212)
T PF13672_consen 3 RSHRGR-GAPNQDAFGIRTDDDGNLAAVADGVGGSP-----YGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKE 76 (212)
T ss_dssp ----TT-SSS--EEEEEE-TCCTCEEEEEEEESTTT-----HHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred ccccCC-CCCCCCCEEeeeCCCCEEEEEEECCCCCc-----hhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 367775 689999999764 567889999999998 8888888776665443332211111 112222 2
Q ss_pred HHH-----------c-cCcCCCceEEEEEEeCCeEEEEEECCCcEEE-EeCCeEEEcCccccccccccccccccCCCCCC
Q 013301 278 AHS-----------S-TKAKGSSTACIIALTSKAIHAVNLGDSGFMV-VRDGCTIFQSPVQQHGFNFTYQLESGNTGDLP 344 (446)
Q Consensus 278 A~~-----------~-~~~~GgSTavvavI~~~~l~vaNVGDSRayL-iR~g~iv~~S~~q~~~~n~p~qL~~g~~~d~p 344 (446)
.+. . .....+||++++++.++.++++|+||||+|+ .++|++...+.++...+ +.++..-...+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~~--~~~~~~~~~~~~~ 154 (212)
T PF13672_consen 77 ILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGEY--PNQTRSLTGDDPE 154 (212)
T ss_dssp HHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHHH--HHCTTSCCHHCCC
T ss_pred HHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccchh--hhhhhccCccccc
Confidence 221 1 1223458888888899999999999999965 57888877666553222 1111111111233
Q ss_pred CcceEEEEecCCCCEEEEEccCCCCCCCHHH-HHHHHHHHH
Q 013301 345 SSGQVFTIPAAPGDVIVAGTDGLFDNLYNNE-VTAVVVHAL 384 (446)
Q Consensus 345 ~~~~v~~i~l~~GD~LVLaSDGLwD~l~~ee-I~~iv~~~~ 384 (446)
...++..++++++|.|+|||||||+.+.+.+ +..++.+.+
T Consensus 155 ~~~~~~~~~~~~~d~ilL~SDG~~~~l~~~~~~~~~l~~~~ 195 (212)
T PF13672_consen 155 PDVQYGSIPLEEGDVILLCSDGVWDNLRSYEDLEQFLKDLW 195 (212)
T ss_dssp TETEEEEEE--TT-EEEEE-HHHHTTS-HHHHHHHH-----
T ss_pred cCCeEEEEEcCCCCEEEEECcCccccCCCHHHHHHHhhhcc
Confidence 3467888889999999999999999998655 777776653
No 16
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.75 E-value=8.8e-17 Score=179.32 Aligned_cols=204 Identities=16% Similarity=0.175 Sum_probs=144.5
Q ss_pred cccceEEEEEEEecccCCCCccCCCceEEEec---CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 013301 194 GERALKLLSGSCYLPHPAKEETGGEDAHFICG---DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHAID 270 (446)
Q Consensus 194 ~~~~l~l~~g~~~~s~~Gk~R~~NEDa~~v~~---~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~~~~ 270 (446)
..+++++.+|.+..+++| +..++|.|.+.. +..+++|+||||... .|..++..+.+.++.+.+. ..+
T Consensus 546 e~~~~~~~~g~a~~~k~g--~~vsGD~y~~~~l~~g~~~~~laDGmGhG~-----~Aa~~S~~~~~ll~~~~~~---g~~ 615 (764)
T TIGR02865 546 ETPKYHVSTGVARAAKDG--ELVSGDSYSFGKLSAGKYAVAISDGMGSGP-----EAAQESSACVRLLEKFLES---GFD 615 (764)
T ss_pred cCCceeehhhHHHhcCCC--CcccCceEEEEEECCCEEEEEEEcccCCCH-----HHHHHHHHHHHHHHHHHHc---CCC
Confidence 345678888888778777 568999987653 346789999999544 4444455555555554432 456
Q ss_pred HHHHHHHHHHcc----CcCCCceEEEEEEe--CCeEEEEEECCCcEEEEeCCeEEEcCccccccccccccccccCCCCCC
Q 013301 271 PARVLEKAHSST----KAKGSSTACIIALT--SKAIHAVNLGDSGFMVVRDGCTIFQSPVQQHGFNFTYQLESGNTGDLP 344 (446)
Q Consensus 271 ~~~~L~~A~~~~----~~~GgSTavvavI~--~~~l~vaNVGDSRayLiR~g~iv~~S~~q~~~~n~p~qL~~g~~~d~p 344 (446)
++++++..+... .....+|+.+++++ .+++.++|+|+++.|+.|++++...+.. +.| +| ...+
T Consensus 616 ~~~ai~~lN~~L~~~~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~-----~lP--lG--il~~-- 684 (764)
T TIGR02865 616 REVAIKTVNSILSLRSTDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSS-----NLP--IG--ILDE-- 684 (764)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCC-----Cce--eE--eccC--
Confidence 788887766532 22234888888886 5689999999999999999877543321 222 22 2222
Q ss_pred CcceEEEEecCCCCEEEEEccCCCCCCCHHH-----HHHHHHHHHhCCCCHHHHHHHHHHHHHHhhccccCCCccchhhh
Q 013301 345 SSGQVFTIPAAPGDVIVAGTDGLFDNLYNNE-----VTAVVVHALRAGLGPQVTAQKIAALARQRAQDRNRQTPFSTAAQ 419 (446)
Q Consensus 345 ~~~~v~~i~l~~GD~LVLaSDGLwD~l~~ee-----I~~iv~~~~~~~~~~q~~A~~Lv~~A~~~a~d~~~~~p~~~~a~ 419 (446)
.+++..+.++++||+|||+||||+|..++++ +.+++.+. ...+|+++++.|++++.+..
T Consensus 685 ~~~~~~~~~L~~GD~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~--~~~~p~ela~~Il~~a~~~~-------------- 748 (764)
T TIGR02865 685 VDVELVRKKLKNGDLIVMVSDGVLEGEKEVEGKVLWLVRKLKET--NTNDPEEIAEYLLEKAKELR-------------- 748 (764)
T ss_pred CccceEEEEeCCCCEEEEECCCCCcCCcccccHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHhc--------------
Confidence 3567788899999999999999999876533 55555542 34689999999999998752
Q ss_pred hccccCCCCCCCCeEEEEEEe
Q 013301 420 DAGFRYYGGKLDDITVIVSYI 440 (446)
Q Consensus 420 ~~g~~~~GGs~DNITVIVV~i 440 (446)
.+...||+|++++++
T Consensus 749 ------~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 749 ------SGKIKDDMTVIVAKV 763 (764)
T ss_pred ------CCCCCCCeEEEEEEe
Confidence 123579999999987
No 17
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.64 E-value=5.2e-14 Score=130.43 Aligned_cols=175 Identities=26% Similarity=0.317 Sum_probs=116.7
Q ss_pred CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcc----CcC-CCceEEEEEEe--CC
Q 013301 226 DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHAIDPARVLEKAHSST----KAK-GSSTACIIALT--SK 298 (446)
Q Consensus 226 ~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~~~~~~~~L~~A~~~~----~~~-GgSTavvavI~--~~ 298 (446)
+..+++|+|++| +|+.++.++..+. .+++.+... ..+|.++++..++.. ... ..+|++++.++ .+
T Consensus 3 ~~~~~~v~D~~G----hG~~aa~~~~~~~-~~~~~~~~~---~~~p~~~l~~ln~~l~~~~~~~~~~~t~~~~~~d~~~~ 74 (193)
T PF07228_consen 3 GRYFIIVGDVSG----HGVSAALLSAALA-SAIRELLDE---GLDPEELLEALNRRLYRDLKGDNRYATACYAIIDPETG 74 (193)
T ss_dssp TEEEEEEEEESS----SSHHHHHHHHHHH-HHHHHHHHT---TTSHHHHHHHHHHHHHHHTTTTSTTEEEEEEEEETTTT
T ss_pred CEEEEEEEEecC----CCHHHHHHHHHHH-HHHHHHHHc---CCCHHHHHHHHHHHHHHHhhhccccceEEEEEecccce
Confidence 345679999999 4555665555443 344433332 445888888877654 444 56788888887 44
Q ss_pred eEEEEEECCCcEEEEeCCe--EEEcCccccccccccccccccCCCCCCCcceEEEEecCCCCEEEEEccCCCCCCCHH--
Q 013301 299 AIHAVNLGDSGFMVVRDGC--TIFQSPVQQHGFNFTYQLESGNTGDLPSSGQVFTIPAAPGDVIVAGTDGLFDNLYNN-- 374 (446)
Q Consensus 299 ~l~vaNVGDSRayLiR~g~--iv~~S~~q~~~~n~p~qL~~g~~~d~p~~~~v~~i~l~~GD~LVLaSDGLwD~l~~e-- 374 (446)
.++++|+|+++++++|+++ ..... ..+.| ||. ..+ .+....++++++||+|+|+||||+|....+
T Consensus 75 ~l~~~~aG~~~~l~~~~~~~~~~~~~-----~~~~~--lG~--~~~--~~~~~~~~~l~~gd~l~l~TDGl~e~~~~~~~ 143 (193)
T PF07228_consen 75 TLTYANAGHPPPLLLRPGGREIEQLE-----SEGPP--LGI--FED--IDYQEQEIQLEPGDRLLLYTDGLFEALNEDGE 143 (193)
T ss_dssp EEEEEEESSSEEEEEETTCTEEEEET-----CSSBB--CSS--SCT--TCEEEEEEE--TTEEEEEECHHHCTTTCHHCH
T ss_pred EEEEeCCCCCCEEEEeccccceeecc-----cCccc--eee--ecc--ccccceEEEeccccEEEEeCCChhhccCCccc
Confidence 7999999999999999943 22111 11222 332 222 356788999999999999999999998544
Q ss_pred -----HHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhccccCCCccchhhhhccccCCCCCCCCeEEEEEEeC
Q 013301 375 -----EVTAVVVHALRAGLGPQVTAQKIAALARQRAQDRNRQTPFSTAAQDAGFRYYGGKLDDITVIVSYIS 441 (446)
Q Consensus 375 -----eI~~iv~~~~~~~~~~q~~A~~Lv~~A~~~a~d~~~~~p~~~~a~~~g~~~~GGs~DNITVIVV~i~ 441 (446)
++.+++.+. ...+++++++.|++.+... ..+...||+|||+++++
T Consensus 144 ~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~~~--------------------~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 144 FFGEERLLELLDEN--RGLSPQEIIDALLEAIDRF--------------------GKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp HCCCHHHHHHHHCH--TTS-HHHHHHHHHHHHHHH--------------------TTSSTSS-EEEEEEEE-
T ss_pred hhHHHHHHHHHhhc--cCCCHHHHHHHHHHHHHHh--------------------cCCCCCCceEEEEEEEC
Confidence 334555433 4567999999999988873 12367799999999975
No 18
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=99.00 E-value=3.1e-08 Score=102.13 Aligned_cols=187 Identities=21% Similarity=0.195 Sum_probs=123.0
Q ss_pred CCCceEEEe---cCCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcc----CcCCCc
Q 013301 216 GGEDAHFIC---GDEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHAIDPARVLEKAHSST----KAKGSS 288 (446)
Q Consensus 216 ~NEDa~~v~---~~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~~~~~~~~L~~A~~~~----~~~GgS 288 (446)
.+.|.|-+- +....++|+|.+| +|+.++.. ..+.....+.+... ...+|.++|++.++.. ...-.+
T Consensus 161 vGGD~yd~~~~~~~~~~i~I~DvsG----~Gv~aal~-m~~~~~~~~~~~~~--~~~~p~~~l~~~n~~~~~~~~~~~f~ 233 (367)
T COG2208 161 VGGDYYDFIQLGEKRLRIGIGDVSG----KGVPAALL-MLMPKLALRLLLES--GPLDPADVLETLNRVLKQNLEEDMFV 233 (367)
T ss_pred cCCceEEEEEECCcEEEEEEEeccC----CCHHHHHH-HHHHHHHHHHhhhc--ccCCHHHHHHHHHHHHHhcccCCcEE
Confidence 455665433 3467899999888 45555555 22222233333322 2567888888765432 222347
Q ss_pred eEEEEEEe--CCeEEEEEECCCcEEEEeCCeE---EEcCccccccccccccccccCCCCCCCcceEEEEecCCCCEEEEE
Q 013301 289 TACIIALT--SKAIHAVNLGDSGFMVVRDGCT---IFQSPVQQHGFNFTYQLESGNTGDLPSSGQVFTIPAAPGDVIVAG 363 (446)
Q Consensus 289 TavvavI~--~~~l~vaNVGDSRayLiR~g~i---v~~S~~q~~~~n~p~qL~~g~~~d~p~~~~v~~i~l~~GD~LVLa 363 (446)
|.+..+++ ...+.++|+|.-..++++.+.. .+.... . +..|...+. ...+...++++||.+||.
T Consensus 234 T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~~-----g----~piG~~~~~--~~~~~~~~l~~gd~lvl~ 302 (367)
T COG2208 234 TLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTAL-----G----LPIGLLPDY--QYEVASLQLEPGDLLVLY 302 (367)
T ss_pred EEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccCC-----C----ceeeecCCc--cchheeEEecCCCEEEEE
Confidence 77778876 5589999999999999998653 211110 1 122222332 567788899999999999
Q ss_pred ccCCCC-------CCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhccccCCCccchhhhhccccCCCCCCCCeEEE
Q 013301 364 TDGLFD-------NLYNNEVTAVVVHALRAGLGPQVTAQKIAALARQRAQDRNRQTPFSTAAQDAGFRYYGGKLDDITVI 436 (446)
Q Consensus 364 SDGLwD-------~l~~eeI~~iv~~~~~~~~~~q~~A~~Lv~~A~~~a~d~~~~~p~~~~a~~~g~~~~GGs~DNITVI 436 (446)
||||+| .+..+...+++... .+.+++++++.+.+...+..- .-...||||+|
T Consensus 303 tDGv~Ea~~~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~i~~~l~~~~~-------------------~~~~~DDiTll 361 (367)
T COG2208 303 TDGVTEARNSDGEFFGLERLLKILGRL--LGQPAEEILEAILESLEELQG-------------------DQIQDDDITLL 361 (367)
T ss_pred cCCeeeeecCCccEecHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHhhC-------------------CccccCceEEE
Confidence 999998 45667777777653 457899999999998887521 11344889999
Q ss_pred EEEeC
Q 013301 437 VSYIS 441 (446)
Q Consensus 437 VV~i~ 441 (446)
++++.
T Consensus 362 ~lk~~ 366 (367)
T COG2208 362 VLKVK 366 (367)
T ss_pred EEEec
Confidence 99975
No 19
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.85 E-value=1.5e-08 Score=112.32 Aligned_cols=183 Identities=15% Similarity=0.194 Sum_probs=117.2
Q ss_pred CCeEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHc----cC---cCCCceEEEEEEeCC
Q 013301 226 DEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHAIDPARVLEKAHSS----TK---AKGSSTACIIALTSK 298 (446)
Q Consensus 226 ~~~lfaVaDGhGG~~~~G~~age~As~l~~~~~~~l~~~~~~~~~~~~~L~~A~~~----~~---~~GgSTavvavI~~~ 298 (446)
.+..|+.+||-+-. ++.+-+...+...+.++.....+..+.|..+|.. .. ..-|..++++.+..+
T Consensus 550 ~~a~~g~~dgs~n~--------~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~rklg~~g~~lg~~~~~~~i~~d 621 (1081)
T KOG0618|consen 550 PQATFGCFDGSRNS--------RVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLNRKLGEEGQVLGGSVVLCQIVED 621 (1081)
T ss_pred CcceEEEEcCCCch--------hHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhhhhhhhhccccchhhheeeccc
Confidence 46789999985532 3433333323233333322223333445555543 21 111233444444322
Q ss_pred --------eEEEEEECCCcEEEEeCCeEEEcCccccc--------------cc-------c----ccccccc-cCCCCCC
Q 013301 299 --------AIHAVNLGDSGFMVVRDGCTIFQSPVQQH--------------GF-------N----FTYQLES-GNTGDLP 344 (446)
Q Consensus 299 --------~l~vaNVGDSRayLiR~g~iv~~S~~q~~--------------~~-------n----~p~qL~~-g~~~d~p 344 (446)
++.+||||+|.++++++|+-...+..+.+ ++ + ..+++|. -....+.
T Consensus 622 ~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~P~v~ 701 (1081)
T KOG0618|consen 622 SLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLFPHVL 701 (1081)
T ss_pred ccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeecCCCeeeceeeeeeeccccccccccc
Confidence 68999999999999999985443322211 11 0 0111111 1122333
Q ss_pred CcceEEEEecCCCC-EEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhccccCCCccchhhhhccc
Q 013301 345 SSGQVFTIPAAPGD-VIVAGTDGLFDNLYNNEVTAVVVHALRAGLGPQVTAQKIAALARQRAQDRNRQTPFSTAAQDAGF 423 (446)
Q Consensus 345 ~~~~v~~i~l~~GD-~LVLaSDGLwD~l~~eeI~~iv~~~~~~~~~~q~~A~~Lv~~A~~~a~d~~~~~p~~~~a~~~g~ 423 (446)
+.|++..+.+.+.| +||+++-+||++|+-+++++.++.. .+|-.+|++|.+.|...
T Consensus 702 p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~----~dpL~AAkKL~d~AqSY------------------- 758 (1081)
T KOG0618|consen 702 PDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNV----EDPLLAAKKLCDLAQSY------------------- 758 (1081)
T ss_pred CCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcC----CchHHHHHHHHHHHHhc-------------------
Confidence 57899999998765 9999999999999999999999853 78999999999999885
Q ss_pred cCCCCCCCCeEEEEEEeCCC
Q 013301 424 RYYGGKLDDITVIVSYISGH 443 (446)
Q Consensus 424 ~~~GGs~DNITVIVV~i~~~ 443 (446)
|..||++|+||++...
T Consensus 759 ----gc~~nv~vlVv~l~~~ 774 (1081)
T KOG0618|consen 759 ----GCAENVSVLVVRLNHL 774 (1081)
T ss_pred ----ccccCeeEEEEEeecc
Confidence 8899999999998754
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=90.92 E-value=2.1 Score=43.02 Aligned_cols=99 Identities=13% Similarity=0.068 Sum_probs=55.1
Q ss_pred CCceEEEe---cCCeEEEEEe--CCCCCCCCCCCHHHHHHHHHHHHHHHHH-hhcCCCCCHHHHHHHHHHcc---CcCCC
Q 013301 217 GEDAHFIC---GDEQVIGVAD--GVGGWADVGVDAGEFARELMSHSFRAVQ-EESTHAIDPARVLEKAHSST---KAKGS 287 (446)
Q Consensus 217 NEDa~~v~---~~~~lfaVaD--GhGG~~~~G~~age~As~l~~~~~~~l~-~~~~~~~~~~~~L~~A~~~~---~~~Gg 287 (446)
+.|.+-+. ++...|-++| ||||+ |+-++.....++...+.... .......+|.++|+..+... ...+.
T Consensus 150 ~GD~~d~~~l~~~~~~~~~~DvsGhg~h---g~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~~~~ 226 (303)
T PRK10693 150 PGLVLDIAALSDNDLAFYCLDVTRAGDN---GVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQ 226 (303)
T ss_pred CccEEeeeecCCCcEEEEEEecCCCCcc---cHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCCCce
Confidence 45665443 3556677887 44454 33333333332222222211 11111246888888776654 22233
Q ss_pred ceEEEEEEe--CCeEEEEEECCCcEEEEeCCeE
Q 013301 288 STACIIALT--SKAIHAVNLGDSGFMVVRDGCT 318 (446)
Q Consensus 288 STavvavI~--~~~l~vaNVGDSRayLiR~g~i 318 (446)
-|++.++++ .+.+.++|.|....++..+++.
T Consensus 227 ~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 227 FPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred eeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 688888887 4479999999999886544444
No 21
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=43.21 E-value=13 Score=29.90 Aligned_cols=18 Identities=22% Similarity=0.615 Sum_probs=14.9
Q ss_pred CCCCEEEEEccCCCCCCC
Q 013301 355 APGDVIVAGTDGLFDNLY 372 (446)
Q Consensus 355 ~~GD~LVLaSDGLwD~l~ 372 (446)
++|.++|+++||+|=.+.
T Consensus 25 ~~G~Rllva~nGv~lEv~ 42 (72)
T PF09436_consen 25 RPGHRLLVASNGVFLEVR 42 (72)
T ss_pred cCCcEEEEecCcEEEEEe
Confidence 489999999999995443
No 22
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=38.36 E-value=41 Score=26.08 Aligned_cols=27 Identities=15% Similarity=0.304 Sum_probs=23.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 013301 370 NLYNNEVTAVVVHALRAGLGPQVTAQKIAA 399 (446)
Q Consensus 370 ~l~~eeI~~iv~~~~~~~~~~q~~A~~Lv~ 399 (446)
.-+++||...+.++ +.+|.+++++|+.
T Consensus 18 ~hse~eIya~L~ec---nMDpnea~qrLL~ 44 (60)
T PF06972_consen 18 CHSEEEIYAMLKEC---NMDPNEAVQRLLS 44 (60)
T ss_pred CCCHHHHHHHHHHh---CCCHHHHHHHHHh
Confidence 36889999999987 7899999999986
No 23
>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i.e. proteins involved in the specification of the neuroblast during cellular differentiation. ; PDB: 2YUE_A 2E63_A.
Probab=25.36 E-value=85 Score=24.78 Aligned_cols=39 Identities=26% Similarity=0.255 Sum_probs=27.2
Q ss_pred Ccceeeccccccccceeeeee-ccCCCCCCCceeeeeeee
Q 013301 98 SSGVYFNDRSQSRCHKARMSS-RKRESPSGGLVSGYFIFD 136 (446)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 136 (446)
.-++-|.+|....-.+..|.+ +....|.+.|.+|..+.|
T Consensus 29 ~~giVFS~rPl~~~E~~~v~I~~~~~~wsG~L~~GvT~~~ 68 (69)
T PF07177_consen 29 NNGIVFSSRPLRIGEKFEVRIDEVEPSWSGSLRIGVTSCD 68 (69)
T ss_dssp SS-EEEESS-B-TT-EEEEEEEEE-SSSSS--EEEEESS-
T ss_pred CceEEEecCCccCCCEEEEEEEecCCCceeEEEEeeEccC
Confidence 557899999999999999999 677799999999988765
No 24
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=24.05 E-value=50 Score=28.05 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=24.9
Q ss_pred ecCCCCEEEEEccCCCCCCCHHHHHHHHHH
Q 013301 353 PAAPGDVIVAGTDGLFDNLYNNEVTAVVVH 382 (446)
Q Consensus 353 ~l~~GD~LVLaSDGLwD~l~~eeI~~iv~~ 382 (446)
-+++||-|+|+.|||+=.+...+..+-++.
T Consensus 21 ~l~~~D~vlL~qdGV~aAl~~~~~~~sl~~ 50 (96)
T COG2168 21 LLTEGDAVLLLQDGVYAALKGNRYLASLRE 50 (96)
T ss_pred HhcccCeEEEEcccchhhhcCcHHHHHHhc
Confidence 357999999999999988888777776654
Done!