BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013302
(446 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/464 (45%), Positives = 278/464 (59%), Gaps = 73/464 (15%)
Query: 1 MGALTSNRKRGDEYLNY-----QIPYQN---LHISKRPRFNYTQQNQNQTLISSNSTVSR 52
MGA+ NRKR DE N+ P +N SK+ RF++ + SSN T+SR
Sbjct: 1 MGAVAINRKRSDESFNFINQQSTNPLRNSPYFQASKKRRFSFAMSEDSGKPASSNPTISR 60
Query: 53 MSRYPEAKPPLKREVHAPCRTLKFGFADKSNQAFGSKKANGYGENQNLGIRMGNVLRYHL 112
+SRYP+AK PL+RE+HAP R + +G K+N Y E N
Sbjct: 61 ISRYPDAKAPLRREIHAPSRGI---------LRYGKAKSNDYCEKD------ANFFVRKY 105
Query: 113 EKAKKSAFGAFRYFSKDKEVIDADNEQEKVEVISDDSSVEEIDAIEDGREGRSLVFDPRP 172
+ AK+SA A R+ +K K+ +D +E EK EV+SDDSSV+ I+ I+
Sbjct: 106 DDAKRSALEALRFVNKGKDFVDLGDEVEKEEVVSDDSSVQAIEVID-------------- 151
Query: 173 RGSDENEKPVVDIGEIDGKSAEERNYHTNLQPSSSSVLTDTNNG------DVSKMIDLLS 226
D+ EK NLQPS SS +TD G D S M+D LS
Sbjct: 152 -CDDDEEK-------------------KNLQPSFSSGVTDVKKGENFRVEDTSMMLDSLS 191
Query: 227 L-----NGEMTVDVYKKLLQSVQKRGSKLKEIEFEIELNEKRWASLKQLWPLKKPEEEQV 281
L N +++ Y+KL+QS +KR SKL+ + FEI LNEK+ + L+Q P K E++V
Sbjct: 192 LDRDVDNDASSLEAYRKLMQSAEKRNSKLEALGFEIVLNEKKLSLLRQSRP--KTVEKRV 249
Query: 282 EELPREPFIPLTKEEEAAVERAFSA-NWRAVLVSHTETGIDITGKILQCLRPGAWLNDEV 340
E +PREPFIPLT++EEA V RAFS N R VL +H + IDITG++LQCL P AWLNDEV
Sbjct: 250 E-VPREPFIPLTEDEEAEVYRAFSGRNRRKVLATHENSNIDITGEVLQCLTPSAWLNDEV 308
Query: 341 INVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIE 400
INVYL LLKERE REP+K+LKCH+FNTFFY KL + GY+F+AV+RWT+ +KLGY LI+
Sbjct: 309 INVYLELLKERETREPKKYLKCHYFNTFFYKKLV-SDSGYNFKAVRRWTTQRKLGYALID 367
Query: 401 CDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLV 444
CD IFVPIH+ +HW LAVI+ ++ K YLDSL G D +L L
Sbjct: 368 CDMIFVPIHRGVHWTLAVINNRESKLLYLDSLNGVDPMILNALA 411
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 176/407 (43%), Positives = 238/407 (58%), Gaps = 50/407 (12%)
Query: 45 SSNSTVSRMSRYPEAKPPLKREVHAPCRTLKFGFADKSNQAFGSKKANGYGENQNLGIRM 104
SS + RYPE K L+R+VHAP R L G D+S + Q G +
Sbjct: 61 SSRPMAPGIYRYPEVKSSLRRQVHAPVRILNSG-RDRSTR-------------QGSGNVL 106
Query: 105 GNVLRYHLEKAKKSAFGAFRYFSKDKEVIDADNEQEKVEVISDDSSVE-------EIDAI 157
G L + + K++A + + D+EVID D+E VE+ISDD+S E E+D +
Sbjct: 107 GTFLTRNNDMWKRNALDSSLRYRTDREVIDVDDELGDVEMISDDTSREGVENVAMEVDEV 166
Query: 158 EDGREGRSLVFDPRPRGSDENEKPVVDIGEIDGKSAEERNYHTNLQPSSSSVLTDTNNGD 217
E+ E + +F +E + G + + N SSS++ + D
Sbjct: 167 EEKAEMGNGLF---------SEVASLKNGSLRVGECSKAN--------SSSLVVNRPVTD 209
Query: 218 VSKMIDLLSLNGEMTVDVYKKLLQSVQKRGSKLKEIEFEIELNEKRWASLKQLWPLKKPE 277
V+ + + Y+K+L+S R SKLK+ F E+ A L+ L + +
Sbjct: 210 VT------------SFEAYRKVLESAVNRTSKLKDRGFVDFFKERGRALLRSLSSFWRQD 257
Query: 278 EEQVEELPREPFIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLN 337
EE VE + RE F+PL++EEE AV RAFSAN +LV+H + IDITGKIL+CL+PG WLN
Sbjct: 258 EEPVEVVQREAFVPLSREEETAVRRAFSANDSNILVTHKNSNIDITGKILRCLKPGKWLN 317
Query: 338 DEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYG 397
DEVIN+Y+ LLKERE REP+KFLKCHFFNTFF+ KL GY++ AV+RWTS K+LGY
Sbjct: 318 DEVINLYMVLLKEREAREPKKFLKCHFFNTFFFTKLVNSATGYNYGAVRRWTSMKRLGYH 377
Query: 398 LIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLV 444
L +CDKIF+PIH IHW LAVI+ KD+KFQYLDS KGR+ K+L L
Sbjct: 378 LKDCDKIFIPIHMNIHWTLAVINIKDQKFQYLDSFKGREPKILDALA 424
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 116/157 (73%), Gaps = 2/157 (1%)
Query: 277 EEEQVEELPREPFIPLTKEEEAAVERAFSA-NWRAVLVSHTETGIDITGKILQCLRPGAW 335
E +++ EPF PL +EE A V A S N + +LVSH + IDI+G+ LQCLRP W
Sbjct: 95 ETKKLVAFCGEPFQPLNEEEVALVNSALSKRNRKKILVSHKNSNIDISGETLQCLRPNQW 154
Query: 336 LNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLG 395
LND+V N+YL LLKER+ R+PQK+ KCHFFNTFFY KL G+ GY+++AV RWT+ +KLG
Sbjct: 155 LNDDVTNLYLELLKERQTRDPQKYFKCHFFNTFFYVKLVSGS-GYNYKAVSRWTTKRKLG 213
Query: 396 YGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSL 432
Y LI+CD IFVPIH IHW L VI+ +++KF YLDSL
Sbjct: 214 YDLIDCDIIFVPIHIDIHWTLGVINNRERKFVYLDSL 250
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 104/204 (50%), Gaps = 22/204 (10%)
Query: 246 RGSKLKEIEFEIELNEKRWASLKQLWPLKKPEEEQVEELPREP-FIPLTKEEEAAVERAF 304
R K K+ E + NE + LK L ++ P P FIP + + A +RA
Sbjct: 306 RDLKEKQTESFQDWNEVDFLQLKGL---------EISPPPTRPKFIPELEFPDNARKRAL 356
Query: 305 SANWRAVLVSHTET-----GIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKF 359
++ VS +E I IT K L LR WLNDEVIN Y+ L+ ER K +
Sbjct: 357 KYLNQSNSVSSSEPIITKFNIPITLKDLHTLRNRQWLNDEVINFYMNLISERSKID-SSL 415
Query: 360 LKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
+ H FNTFFY L +GY V+RW AKK + + D +F+P+H +HWC+AVI
Sbjct: 416 PRVHGFNTFFYTSLQ--RRGY--AGVRRW--AKKARVNIADMDAVFIPVHLDVHWCMAVI 469
Query: 420 DRKDKKFQYLDSLKGRDKKVLGDL 443
++ K+F+Y DSL G KV L
Sbjct: 470 NKSKKRFEYWDSLAGSPGKVFDLL 493
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 88/158 (55%), Gaps = 11/158 (6%)
Query: 289 FIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGLL 348
+ LT++ E + A + ++S + + IT +Q L+ WLNDEVIN Y+ LL
Sbjct: 365 LLELTEDMEKEISNALGHGPQDEILS-SAFKLRITRGDIQTLKNYHWLNDEVINFYMNLL 423
Query: 349 KEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPI 408
ER K+ Q + H F+TFFY KL G ++AVKRWT G L E + I VPI
Sbjct: 424 VERNKK--QGYPALHVFSTFFYPKLKSGG----YQAVKRWTK----GVNLFEQEIILVPI 473
Query: 409 HKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLVFF 446
H+++HW L VID + K +YLDS+ + ++ L+ +
Sbjct: 474 HRKVHWSLVVIDLRKKCLKYLDSMGQKGHRICEILLQY 511
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 88/158 (55%), Gaps = 11/158 (6%)
Query: 289 FIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGLL 348
+ LT++ E + A + ++S + + IT +Q L+ WLNDEVIN Y+ LL
Sbjct: 365 LLELTEDMEKEISNALGHGPQDEILS-SAFKLRITRGDIQTLKNYHWLNDEVINFYMNLL 423
Query: 349 KEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPI 408
ER K+ Q + H F+TFFY KL G ++AVKRWT G L E + I VPI
Sbjct: 424 VERNKK--QGYPALHVFSTFFYPKLKSGG----YQAVKRWTK----GVNLFEQEIILVPI 473
Query: 409 HKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLVFF 446
H+++HW L VID + K +YLDS+ + ++ L+ +
Sbjct: 474 HRKVHWSLVVIDLRKKCLKYLDSMGQKGHRICEILLQY 511
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 320 IDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKG 379
+ IT +Q L+ WLNDEVIN Y+ LL ER K+ Q + H F+TFFY KL G
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSKK--QGYPALHAFSTFFYPKLKSGG-- 449
Query: 380 YDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKV 439
++AVKRWT G L E + + VPIH+++HW L V+D + K +YLDS+ + ++
Sbjct: 450 --YQAVKRWTK----GVNLFEQELVLVPIHRKVHWSLVVMDLRKKCLKYLDSMGQKGHRI 503
Query: 440 LGDLVFF 446
L+ +
Sbjct: 504 CEILLQY 510
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 13/147 (8%)
Query: 289 FIPLTKEEEAAVERAF-SANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGL 347
F +T+E E ++ F + N VL + IT K +Q L WLNDE+IN Y+ +
Sbjct: 416 FPEITEEMEKEIKNVFRNGNQDEVLSEAFR--LTITRKDIQTLNHLNWLNDEIINFYMNM 473
Query: 348 LKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVP 407
L ER K + F H FNTFF+ KL K ++AVKRWT KK+ + D + VP
Sbjct: 474 LMERSKE--KGFPSVHAFNTFFFTKL----KTAGYQAVKRWT--KKVD--VFSVDILLVP 523
Query: 408 IHKQIHWCLAVIDRKDKKFQYLDSLKG 434
IH +HWCLAV+D + K Y DS+ G
Sbjct: 524 IHLGVHWCLAVVDFRRKSITYYDSMGG 550
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 25/201 (12%)
Query: 244 QKRGSKLKEIEFEIELNEKRWASLKQLWPLKKPEEEQVEELPREPFIPLTKEEEAAVERA 303
Q RG +L+++ +EL + + K E+++V++ F+ L +A VERA
Sbjct: 439 QTRGDRLEDVRKRLEL--------QGIAIRPKVEKKKVDD-----FMALPDAADALVERA 485
Query: 304 FSA-NWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKC 362
+S N V I I K L L WLNDE+IN YL L+ +R + K+ K
Sbjct: 486 WSGGNPNEQFVD--AFSIQICKKDLATLSGLHWLNDEIINFYLQLICDRSNGD-SKYPKI 542
Query: 363 HFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVIDRK 422
+ FNTFFY+ + +KGY +VKRWT + D + VP+H +HWC+AVID
Sbjct: 543 YAFNTFFYSNIV--SKGY--ASVKRWTRK----VDIFAFDIVLVPVHLGMHWCMAVIDMG 594
Query: 423 DKKFQYLDSLKGRDKKVLGDL 443
+KK ++ DSL + VL L
Sbjct: 595 EKKIEFYDSLYDGNTAVLPAL 615
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 13/147 (8%)
Query: 289 FIPLTKEEEAAVERAF-SANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGL 347
F +T+E E ++ F + N VL + IT K +Q L WLNDE+IN Y+ +
Sbjct: 420 FPEITEEMEKEIKNVFRNGNQDEVLSEAFR--LTITRKDIQTLNHLNWLNDEIINFYMNM 477
Query: 348 LKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVP 407
L ER K + H FNTFF+ KL K ++AVKRWT KK+ + D + VP
Sbjct: 478 LMERSKE--KGLPSVHAFNTFFFTKL----KTAGYQAVKRWT--KKVD--VFSVDILLVP 527
Query: 408 IHKQIHWCLAVIDRKDKKFQYLDSLKG 434
IH +HWCLAV+D + K Y DS+ G
Sbjct: 528 IHLGVHWCLAVVDFRKKNITYYDSMGG 554
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 13/147 (8%)
Query: 289 FIPLTKEEEAAVERAF-SANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGL 347
F +T+E E ++ F + N VL + IT K +Q L WLNDE+IN Y+ +
Sbjct: 421 FPEITEEMEKEIKNVFRNGNQDEVLSEAFR--LTITRKDIQTLNHLNWLNDEIINFYMNM 478
Query: 348 LKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVP 407
L ER K + H FNTFF+ KL K ++AVKRWT KK+ + D + VP
Sbjct: 479 LMERSKE--KGLPSVHAFNTFFFTKL----KTAGYQAVKRWT--KKVD--VFSVDILLVP 528
Query: 408 IHKQIHWCLAVIDRKDKKFQYLDSLKG 434
IH +HWCLAV+D + K Y DS+ G
Sbjct: 529 IHLGVHWCLAVVDFRKKNITYYDSMGG 555
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 10/127 (7%)
Query: 320 IDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKG 379
+ IT +Q L+ WLNDEVIN Y+ LL ER K+ Q + H +TFFY KL G
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSKK--QGYPALHALSTFFYPKLKSGG-- 449
Query: 380 YDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKV 439
++AVKRWT G L + + + VPIH+++HW L V+D + K +YLDS+ + ++
Sbjct: 450 --YQAVKRWTK----GVNLFDQELVLVPIHRKVHWSLVVMDLRKKCLKYLDSMGQKGHRI 503
Query: 440 LGDLVFF 446
L+ +
Sbjct: 504 CEILLQY 510
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 287 EPFIPLTKEEEAAVERAFSAN--WRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVY 344
EP P+ EE + + + + S + ++ K L+CL PG +L VIN Y
Sbjct: 296 EPLSPMVVEEACELPEGLPEDIYYPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFY 355
Query: 345 LGLLKEREKREPQKFLKCHFFNTFFYNKL--ACGNKGYD----FRAVKRWTSAKKLGYGL 398
+ ++ + CHFFNTFFY KL A KG D F +RW G+ L
Sbjct: 356 IRYVQHHVFSADKTAANCHFFNTFFYKKLTEAVSYKGNDRDAYFVKFRRWWK----GFDL 411
Query: 399 IECDKIFVPIHKQIHWCLAVIDRKDKKFQ------YLDSL 432
IF+PIH+ +HW L +I DK+ + +LDSL
Sbjct: 412 FCKSYIFIPIHEDLHWSLVIICIPDKEDESGLTIIHLDSL 451
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 320 IDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKL--ACGN 377
+ + K L+CL P +L V+N Y+ L+++ Q CHFFNT+FY KL A
Sbjct: 343 VQVCLKDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFNTYFYKKLSDAVTY 402
Query: 378 KGYD----FRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQ------ 427
KG D F +RW G L IF+PIH+ +HW L ++ DKK +
Sbjct: 403 KGNDKDAFFVRFRRWWK----GIDLFRKAYIFIPIHEDLHWSLVIVCIPDKKDESGLTIL 458
Query: 428 YLDSL 432
+LDSL
Sbjct: 459 HLDSL 463
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 292 LTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGLLKER 351
L ++++ V++A ++ L++ I+IT + + L P WLND +I ++ +
Sbjct: 407 LNEKDDDQVQKALASRENTQLMNRD--NIEITVRDFKTLAPRRWLNDTIIEFFMKYI--- 461
Query: 352 EKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPIH-K 410
EK P FN+FFY L+ +GY + V+RW KK + + DKIF PI+
Sbjct: 462 EKSTPNTVA----FNSFFYTNLS--ERGY--QGVRRWMKRKKTQ--IDKLDKIFTPINLN 511
Query: 411 QIHWCLAVIDRKDKKFQYLDSL 432
Q HW L +ID K K Y+DSL
Sbjct: 512 QSHWALGIIDLKKKTIGYVDSL 533
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 14/105 (13%)
Query: 335 WLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
WLND+V+N+Y L+ + K HFFN+FFY+KL KGYD VKRWT
Sbjct: 395 WLNDQVMNMYGDLVMDTVPE------KVHFFNSFFYDKLR--TKGYD--GVKRWTK---- 440
Query: 395 GYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKV 439
+ + + +PIH ++HW L +D + + Y DS + +++
Sbjct: 441 NVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRC 485
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 14/105 (13%)
Query: 335 WLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
WLND+V+N+Y L+ + K HFFN+FFY+KL KGYD VKRWT
Sbjct: 401 WLNDQVMNMYGDLVMDTVPE------KVHFFNSFFYDKLR--TKGYD--GVKRWTK---- 446
Query: 395 GYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKV 439
+ + + +PIH ++HW L +D + + Y DS + +++
Sbjct: 447 NVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRC 491
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 319 GIDITGKILQCLRPGAWLNDEVINVYLGLLKER-EKREPQKFLKCHFFNTFFYNKLACGN 377
I IT L L G +LND +++ YL L + + + P H FNTFFYN+L +
Sbjct: 346 SIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTFFYNRLTSKD 405
Query: 378 KG---YDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKG 434
K R V++WT L I VPI++ HW LA+I D+ L+
Sbjct: 406 KDGKRLGHRGVRKWTQK----VDLFHKKYIIVPINETFHWYLAIICNIDRLMPVDTKLEE 461
Query: 435 RDKKVLGDL 443
+D+ V+ +
Sbjct: 462 QDEIVMSSV 470
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 21/146 (14%)
Query: 286 REPFIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYL 345
R+PFI +E R N+R H +D+ L L WLND+VIN+Y
Sbjct: 540 RKPFI--NREITNYRARHQKCNFRIFYNKHM---LDMDD--LATLDGQNWLNDQVINMYG 592
Query: 346 GLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIF 405
L+ + K HFFN+FF+ +L KGY+ VKRWT KK+ L + +
Sbjct: 593 ELIMDAVPD------KVHFFNSFFHRQLV--TKGYN--GVKRWT--KKVD--LFKKSLLL 638
Query: 406 VPIHKQIHWCLAVIDRKDKKFQYLDS 431
+PIH ++HW L + ++ + DS
Sbjct: 639 IPIHLEVHWSLITVTLSNRIISFYDS 664
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 21/146 (14%)
Query: 286 REPFIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYL 345
R+PFI +E R N+R H +D+ L L WLND+VIN+Y
Sbjct: 540 RKPFI--NREITNYRARHQKCNFRIFYNKHM---LDMDD--LATLDGQNWLNDQVINMYG 592
Query: 346 GLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIF 405
L+ + K HFFN+FF+ +L KGY+ VKRWT KK+ L + +
Sbjct: 593 ELIMDAVPD------KVHFFNSFFHRQLV--TKGYN--GVKRWT--KKVD--LFKKSLLL 638
Query: 406 VPIHKQIHWCLAVIDRKDKKFQYLDS 431
+PIH ++HW L + ++ + DS
Sbjct: 639 IPIHLEVHWSLITVTLSNRIISFYDS 664
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 21/146 (14%)
Query: 286 REPFIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYL 345
R+PFI +E R N+R H +D+ L L WLND+VIN+Y
Sbjct: 534 RKPFI--NREITNYRARHQKCNFRIFYNKHM---LDMDD--LATLDGQNWLNDQVINMYG 586
Query: 346 GLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIF 405
L+ + K HFFN+FF+ +L KGY+ VKRWT KK+ L + +
Sbjct: 587 ELIMDAVPD------KVHFFNSFFHRQLV--TKGYN--GVKRWT--KKVD--LFKKSLLL 632
Query: 406 VPIHKQIHWCLAVIDRKDKKFQYLDS 431
+PIH ++HW L + + + DS
Sbjct: 633 IPIHLEVHWSLITVTLSSRIISFYDS 658
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 316 TETGIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFY----- 370
T+ G+ +T + L+CL G +LND +I+ YL L EK + + H F++FFY
Sbjct: 743 TKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLL-LEKASDELVERSHIFSSFFYKCLTR 801
Query: 371 --NKLACGNKGYDF-----RAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N L N R V+ WT + D IFVP+++ HW LAVI
Sbjct: 802 KENNLTEDNPDLSVAQRRHRRVRTWTR----HINIFNKDYIFVPVNESSHWYLAVI 853
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 316 TETGIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFY----- 370
T+ G+ +T + L+CL G +LND +I+ YL L EK + + H F++FFY
Sbjct: 756 TKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLI-LEKASDELVERSHIFSSFFYKCLTR 814
Query: 371 --NKLACGNKGYDF-----RAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N L N + V+ WT + D IFVP+++ HW LAVI
Sbjct: 815 KENNLTEDNPNLSMAQRRHKRVRTWTR----HINIFNKDYIFVPVNESSHWYLAVI 866
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 316 TETGIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFY----- 370
T+ G+ +T + L+CL G +LND +I+ YL L EK + + H F++FFY
Sbjct: 753 TKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLI-LEKASDELVERSHIFSSFFYKCLTR 811
Query: 371 --NKLACGNKGYDF-----RAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N L N + V+ WT + D IFVP+++ HW LAVI
Sbjct: 812 KENNLTEDNPNLSMAQRRHKRVRTWTR----HINIFNKDYIFVPVNESSHWYLAVI 863
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 316 TETGIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFY----- 370
T+ G+ +T + L+CL G +LND +I+ YL L EK + + H F++FFY
Sbjct: 743 TKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLL-LEKASDELVERSHIFSSFFYKCLTR 801
Query: 371 --NKLACGNKGYDF-----RAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N L N R V+ WT + D IFVP+++ HW LAVI
Sbjct: 802 KENNLTEDNPDLSVAQRRHRRVRTWTR----HINIFNKDYIFVPVNESSHWYLAVI 853
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 319 GIDITGKILQCLRPGAWLNDEVINVYLG-LLKEREKREPQKFLKCHFFNTFFYNKL---- 373
GI +T + L CL G +LND +I+ YL L+ E+ K+E + H F++FFY +L
Sbjct: 665 GISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDAD--RIHIFSSFFYKRLNQRE 722
Query: 374 ----ACGNKGYDFR---AVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N + VK WT + E D IFVP+++ HW LAV+
Sbjct: 723 RRNHETTNLSIQQKRHGRVKTWTRH----VDIFEKDFIFVPLNEAAHWFLAVV 771
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 319 GIDITGKILQCLRPGAWLNDEVINVYLG-LLKEREKREPQKFLKCHFFNTFFYNKL---- 373
GI +T + L CL G +LND +I+ YL L+ E+ K+E + H F++FFY +L
Sbjct: 685 GISVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDAD--RIHIFSSFFYKRLNQRE 742
Query: 374 ----ACGNKGYDFR---AVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N + VK WT + E D IFVP+++ HW LAV+
Sbjct: 743 RRNPETTNLSIQQKRHGRVKTWTRH----VDIFEKDFIFVPLNEAAHWFLAVV 791
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 19/122 (15%)
Query: 322 ITGKILQCLRPGAWLNDEVINVYLGLLKERE------KREPQKFLKCHFFNTFFYNKLAC 375
IT + +CL W+ND +++ + E KRE + H ++FFY KL
Sbjct: 444 ITNQDFKCLFNKDWVNDSILDFFTKFYIESSIEKSIIKRE-----QVHLMSSFFYTKLIS 498
Query: 376 GNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGR 435
Y + VK+W + L + +PI+ HW +I D LD + +
Sbjct: 499 NPADY-YSNVKKWVN----NTDLFSKKYVVIPINISYHWFSCIITNLD---AILDFHQNK 550
Query: 436 DK 437
DK
Sbjct: 551 DK 552
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 327 LQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYD----- 381
++ L+P ++ND +I+ Y+ LK R P++ + HFFN FF+ KLA +KG
Sbjct: 312 IELLKPRRFINDTIIDFYIKYLKNR--ISPKERGRFHFFNCFFFRKLANLDKGTPSTCGG 369
Query: 382 ---FRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
++ V++WT L E D IF+PI+ HW L +I
Sbjct: 370 REAYQRVQKWTK----NVDLFEKDYIFIPINCSFHWSLVII 406
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 38.5 bits (88), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 30/140 (21%)
Query: 319 GIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNK 378
+ I + ++ L+P ++ND +I+ Y+ LK + + E + FFN+FF+ KLA +K
Sbjct: 393 AVSICKRDVELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFH--FFNSFFFRKLADLDK 450
Query: 379 G--------YDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI----------- 419
F V++WT + +G D IFVP++ +HW L VI
Sbjct: 451 DPSSIADGKAAFLRVRKWTRKVDM-FGK---DYIFVPVNYNLHWSLIVICHPGEVANRTD 506
Query: 420 -DRKDKK----FQYLDSLKG 434
D D K ++DS+KG
Sbjct: 507 LDLDDSKKVPCILHMDSIKG 526
>sp|C0R403|SYT_WOLWR Threonine--tRNA ligase OS=Wolbachia sp. subsp. Drosophila simulans
(strain wRi) GN=thrS PE=3 SV=1
Length = 633
Score = 36.6 bits (83), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 283 ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVI 341
+L R P P T +A + + A WR D G +LQ + AW N + +
Sbjct: 177 DLCRGPHSPSTGRVKAFKLMKVAGAYWRG----------DAKGPMLQRIYGTAWRNKDEL 226
Query: 342 NVYLGLLKEREKREPQKFLK 361
N YL LKE EKR+ +K K
Sbjct: 227 NAYLECLKEAEKRDHRKIAK 246
>sp|Q73GH6|SYT_WOLPM Threonine--tRNA ligase OS=Wolbachia pipientis wMel GN=thrS PE=3
SV=1
Length = 633
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 283 ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVI 341
+L R P P T +A + + A WR D G +LQ + AW N + +
Sbjct: 177 DLCRGPHSPSTGRVKAFKLMKVAGAYWRG----------DSKGPMLQRIYGTAWGNKDEL 226
Query: 342 NVYLGLLKEREKREPQKFLK 361
N YL LKE EKR+ +K K
Sbjct: 227 NAYLECLKEAEKRDHRKIAK 246
>sp|O67012|SPOT_AQUAE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Aquifex
aeolicus (strain VF5) GN=spoT PE=3 SV=1
Length = 696
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 104 MGNVLRYHLEKAKKSAFGAFRYFSKDKEVIDADNEQEKVEVISDDSSVEE------IDAI 157
+ NVLR + EK K+ A YF D V+ +D ++ ++SD + V + ++
Sbjct: 598 LKNVLRLNPEKVKEVQLQASGYFQTDIRVVASD----RIGLLSDITKVISESGSNIVSSM 653
Query: 158 EDGREGRSLV-FDPRPRGSDENEKPVVDIGEIDGKSAEERNYH 199
+ REG++++ F + + EK + I ++G +R YH
Sbjct: 654 TNTREGKAVMDFTVEVKNKEHLEKIMKKIKSVEGVKICKRLYH 696
>sp|B3CMJ4|SYT_WOLPP Threonine--tRNA ligase OS=Wolbachia pipientis subsp. Culex pipiens
(strain wPip) GN=thrS PE=3 SV=1
Length = 633
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 283 ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVI 341
+L R P P T +A + + A WR D G +LQ + AW N + +
Sbjct: 177 DLCRGPHSPSTGRVKAFKLMKVAGAYWRG----------DSKGPMLQRIYGTAWRNKDEL 226
Query: 342 NVYLGLLKEREKREPQKFLK 361
N YL L+E EKR+ +K K
Sbjct: 227 NTYLKRLEEAEKRDHRKIAK 246
>sp|Q82VV1|SYT_NITEU Threonine--tRNA ligase OS=Nitrosomonas europaea (strain ATCC 19718
/ NBRC 14298) GN=thrS PE=3 SV=1
Length = 635
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 223 DLLSLNGEMTVDVYKKLLQSVQKRGSKLKEIEFEIELNEKRWASLKQLWPLKKP----EE 278
DL+++ M ++ K+ L+ +K + + I F ++ E A + + P +P +
Sbjct: 116 DLVAIEKRMQ-EISKRALKIERKVWDRSRAINFFKDIGEHYKAQIIESIPDNEPVSLYSQ 174
Query: 279 EQVEELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLN 337
+L R P +P T + + + + A WR D ++LQ + AW++
Sbjct: 175 GDFTDLCRGPHVPYTSKIKVFKLMKIAGAYWRG----------DSKNEMLQRIYGTAWVS 224
Query: 338 DEVINVYLGLLKEREKREPQKFLK 361
+E N YL L+E EKR+ +K K
Sbjct: 225 NEEQNNYLRCLEEAEKRDHRKLGK 248
>sp|Q8NPZ0|SYT_CORGL Threonine--tRNA ligase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=thrS PE=3 SV=2
Length = 695
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 276 PEEEQVE--ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRP 332
P +VE +L R P IP T+ A A+ R+ +A WR D LQ +
Sbjct: 202 PRTSEVEWSDLCRGPHIPTTRYIPAFALTRSSAAYWRG----------DQDNAGLQRIYG 251
Query: 333 GAWLNDEVINVYLGLLKEREKREPQKF 359
AW + E ++ Y +L E EKR+ ++
Sbjct: 252 TAWEDKESLDAYQTMLAEAEKRDHRRL 278
>sp|Q8FPJ3|SYT_COREF Threonine--tRNA ligase OS=Corynebacterium efficiens (strain DSM
44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=thrS PE=3 SV=2
Length = 694
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 276 PEEEQVE--ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRP 332
P +VE +L R P IP T+ A A+ R+ +A WR D T LQ +
Sbjct: 201 PRTNEVEWSDLCRGPHIPTTRYIPAFALTRSSAAYWRG----------DQTNAGLQRIYG 250
Query: 333 GAWLNDEVINVYLGLLKEREKREPQKF 359
AW + E ++ Y +L E EKR+ ++
Sbjct: 251 TAWESKEKLDEYQTMLAEAEKRDHRRL 277
>sp|Q5GSG4|SYT_WOLTR Threonine--tRNA ligase OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=thrS PE=3 SV=1
Length = 632
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 283 ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVI 341
+L R P P T +A + + A WR ++ G +LQ + AW N + +
Sbjct: 177 DLCRGPHSPSTSRVKAFKLMKVAGAYWRG----------NVKGPMLQRIYGTAWRNKDEL 226
Query: 342 NVYLGLLKEREKREPQKFLK 361
N+YL L+E +KR+ ++ K
Sbjct: 227 NIYLKRLEEAKKRDHRRIAK 246
>sp|Q5WT82|SYT_LEGPL Threonine--tRNA ligase OS=Legionella pneumophila (strain Lens)
GN=thrS PE=3 SV=1
Length = 637
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 282 EELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEV 340
E+L R P +P T +A + + A WR D ++LQ + AW + +
Sbjct: 178 EDLCRGPHVPSTGFLKAFKLTKVAGAYWRG----------DSNNEMLQRIYGTAWADKKS 227
Query: 341 INVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
+ YL L+E EKR+ +K K + F + +A G F K WT ++L
Sbjct: 228 LEEYLYRLEEAEKRDHRKLGKA--LDLFHFQDIA---PGMVFWHPKGWTIYQEL 276
>sp|A1WMG5|SYT_VEREI Threonine--tRNA ligase OS=Verminephrobacter eiseniae (strain
EF01-2) GN=thrS PE=3 SV=1
Length = 639
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 278 EEQVEELPREPFIPLT-KEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWL 336
E E+L R P +P T K + + + A WR D ++LQ + AW
Sbjct: 174 EGSFEDLCRGPHVPSTGKLKFFKLMKVAGAYWRG----------DHRNQMLQRVYGTAWA 223
Query: 337 NDEVINVYLGLLKEREKREPQKF 359
+ E + YL +L+E EKR+ +K
Sbjct: 224 SKEALQQYLTMLEEAEKRDHRKL 246
>sp|Q5ZS05|SYT_LEGPH Threonine--tRNA ligase OS=Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=thrS
PE=3 SV=2
Length = 637
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 282 EELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEV 340
E+L R P +P T +A + + A WR D ++LQ + AW + +
Sbjct: 178 EDLCRGPHVPSTGFLKAFKLTKVAGAYWRG----------DSNNEMLQRIYGTAWADKKS 227
Query: 341 INVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
+ YL L+E EKR+ +K K + F + +A G F K WT ++L
Sbjct: 228 LEEYLFRLEEAEKRDHRKLGKA--LDLFHFQDIA---PGMVFWHPKGWTIYQEL 276
>sp|A5IAK9|SYT_LEGPC Threonine--tRNA ligase OS=Legionella pneumophila (strain Corby)
GN=thrS PE=3 SV=1
Length = 637
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 282 EELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEV 340
E+L R P +P T +A + + A WR D ++LQ + AW + +
Sbjct: 178 EDLCRGPHVPSTGFLKAFKLTKVAGAYWRG----------DSNNEMLQRIYGTAWADKKS 227
Query: 341 INVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
+ YL L+E EKR+ +K K + F + +A G F K WT ++L
Sbjct: 228 LEEYLFRLEEAEKRDHRKLGKA--LDLFHFQDIA---PGMVFWHPKGWTIYQEL 276
>sp|Q5X1H3|SYT_LEGPA Threonine--tRNA ligase OS=Legionella pneumophila (strain Paris)
GN=thrS PE=3 SV=1
Length = 637
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 282 EELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEV 340
E+L R P +P T +A + + A WR D ++LQ + AW + +
Sbjct: 178 EDLCRGPHVPSTGFLKAFKLTKVAGAYWRG----------DSNNEMLQRIYGTAWADKKS 227
Query: 341 INVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
+ YL L+E EKR+ +K K + F + +A G F K WT ++L
Sbjct: 228 LEEYLFRLEEAEKRDHRKLGKA--LDLFHFQDIA---PGMVFWHPKGWTIYQEL 276
>sp|Q75DV2|IML1_ASHGO Vacuolar membrane-associated protein IML1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=IML1 PE=3 SV=2
Length = 1534
Score = 32.3 bits (72), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 129 DKEVIDAD------NEQEKVEVISDDSSVEEIDAIEDGREGRSLVFDPRPRGSDENEKPV 182
DKEV DAD NE + + D S++E + G E +S+V+ P PR S KP+
Sbjct: 568 DKEVFDADKCYPLSNENRESTPLEDTSNIESTVLPKSGHEVQSIVWKP-PRSS----KPL 622
Query: 183 VDIGEIDGKSAEERNYHTNLQPSSSSVLTDTNNGDVS 219
V+ + T + SS LTDT++ + S
Sbjct: 623 VEPTTVQSVIVSLHQPGT-INNSSEDDLTDTSSSNSS 658
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 174,883,084
Number of Sequences: 539616
Number of extensions: 7905479
Number of successful extensions: 24113
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 23954
Number of HSP's gapped (non-prelim): 212
length of query: 446
length of database: 191,569,459
effective HSP length: 121
effective length of query: 325
effective length of database: 126,275,923
effective search space: 41039674975
effective search space used: 41039674975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)