Your job contains 1 sequence.
>013304
MGAEVIEVWGTWEELLLGGAVLRHGTRDWNLVAAELRARTVCPYTVTPEMCKAHYEDLQQ
RFYGCKSLESKLETLKAERGDDCQVDNDCSQTESPVPCQKSDAVVCSSKETSKDGLSAGS
FTRETRTHWSPVSQIPAAVAAEEMETKTQGLLSSEQEKVSSSEKITAIVCGGQVGSLKKR
RGKRKRKDCSRDVKEGSVGESDFLGVPDAKPVYRRKENSTPVSGQFARSSGADDQSGSLR
KDSIDDIKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSI
KELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKTMRQYFKDNEYGNKPTTSFLSPS
SPLHKPPVKPRTARPGRSKLSLKAANAGNPADKPLSRAKKPSNVDSPSSMESLTLTKKSL
SRKVGRTNASQRAESATRGRKRSRAS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013304
(446 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1006230673 - symbol:BRD4 "AT1G61215" species:3... 503 9.8e-70 2
TAIR|locus:2101477 - symbol:AT3G60110 species:3702 "Arabi... 145 1.6e-15 2
TAIR|locus:2050574 - symbol:AT2G44430 species:3702 "Arabi... 147 2.6e-15 2
TAIR|locus:2060040 - symbol:AT2G42150 species:3702 "Arabi... 136 2.2e-13 2
TAIR|locus:2095878 - symbol:AT3G57980 species:3702 "Arabi... 106 9.8e-10 3
FB|FBgn0039654 - symbol:Brd8 "Brd8" species:7227 "Drosoph... 121 2.1e-05 2
>TAIR|locus:1006230673 [details] [associations]
symbol:BRD4 "AT1G61215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001487 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:BT015126 EMBL:BT015908
IPI:IPI00533894 RefSeq:NP_974063.1 UniGene:At.49477
ProteinModelPortal:Q6AWX2 SMR:Q6AWX2 STRING:Q6AWX2 PRIDE:Q6AWX2
EnsemblPlants:AT1G61215.1 GeneID:2745841 KEGG:ath:AT1G61215
TAIR:At1g61215 InParanoid:Q6AWX2 OMA:ESNDECH PhylomeDB:Q6AWX2
ProtClustDB:CLSN2681296 Genevestigator:Q6AWX2 Uniprot:Q6AWX2
Length = 475
Score = 503 (182.1 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 158/401 (39%), Positives = 208/401 (51%)
Query: 67 SLESKLETLKAERGDDCQVDN-DCSQTESPVPCQKSDAV-VCSSKETSKDGLSAGSFTRE 124
SLESKL++LK+E D+C +N D S+T S P KS+ C+SK+TSKD S GSFT++
Sbjct: 97 SLESKLQSLKSESNDECHQNNYDSSRTLSLEPSPKSEGGGECTSKDTSKDLSSVGSFTQQ 156
Query: 125 --TRTHWSPVSQIPAAVAAEEMETKTQGLLXXXXXXXXXXXXITAIVCGGQV-GSLXXXX 181
T T+WSP ++ A V E+ KT+ LL GGQV S+
Sbjct: 157 ELTTTNWSPEAKSEAPVVIEQ--EKTKDLLHNDIFESVYGG-------GGQVLPSMRKKR 207
Query: 182 XXXXXXDCS----RDVKEGS-VGESDFLGVP-DAKPVYRRKENSTPVSGQFARSSGADDQ 235
DCS ++V E S V ESD D +YR KE ++ S Q S G
Sbjct: 208 GKRKRKDCSVSVGKEVMEVSAVEESDLFDTSADIASIYRSKEAASTSSSQ---SRG---H 261
Query: 236 SGSLRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTXXXXXXXX 295
S +L K+ + ++ ++AQNE A VFR RLDSQKRGRYKK++ RHMD+DT
Sbjct: 262 SLALPKE----LMKIYNTIAQNECALVFRRRLDSQKRGRYKKLVRRHMDLDTVQSRINGC 317
Query: 296 XXXXXKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKTMRQYF-KDNEYGNKXXX 354
KELFRD LL+ANNA +FYSKNTRE+KSA LR IV K++R Y +D+
Sbjct: 318 SISSAKELFRDFLLVANNAAIFYSKNTREYKSAVGLRDIVTKSLRHYLTEDHPPHRSSIT 377
Query: 355 XXXXXXXXXHKPPVKPRTARPGRSKLSLKAANAG-NPAD-------KPLSRAKKPSNVDS 406
H+ P R+ L+ K G +P K SR K S D
Sbjct: 378 AGSTKVVVLHQKSTSPSV----RTSLAAKKPRTGAHPLKTVVQDMAKTSSRGNKRSVTDL 433
Query: 407 P-SSMESLTLTKKSLS-RKVGRTNASQRAES-ATRGRKRSR 444
P S+++S KK + RK GR A++ ES A GRKR+R
Sbjct: 434 PVSAVKSSAAGKKGTAVRKDGR-QANRGLESPALMGRKRNR 473
Score = 222 (83.2 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 43/71 (60%), Positives = 54/71 (76%)
Query: 9 WGTWEELLLGGAVLRHGTRDWNLVAAELRARTVCPYTVTPEMCKAHYEDLQQRFYGCKSL 68
WGTWEELLLGGAVLRHGT DW +VA ELR+ ++ P TPE+CKA Y+DL++R+ GCK+
Sbjct: 14 WGTWEELLLGGAVLRHGTGDWTVVADELRSHSL-PEIFTPEICKAKYKDLRKRYVGCKAW 72
Query: 69 ESKLETLKAER 79
E LK +R
Sbjct: 73 ---FEELKKKR 80
>TAIR|locus:2101477 [details] [associations]
symbol:AT3G60110 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002686 GO:GO:0003677
GO:GO:0003682 SUPFAM:SSF46689 Gene3D:1.20.920.10 SUPFAM:SSF47370
ProtClustDB:CLSN2718100 EMBL:AY056393 EMBL:BT000519 IPI:IPI00538592
RefSeq:NP_567092.4 UniGene:At.26330 ProteinModelPortal:Q93ZQ2
SMR:Q93ZQ2 PRIDE:Q93ZQ2 EnsemblPlants:AT3G60110.1 GeneID:825181
KEGG:ath:AT3G60110 TAIR:At3g60110 OMA:RRTSKEI PhylomeDB:Q93ZQ2
Genevestigator:Q93ZQ2 Uniprot:Q93ZQ2
Length = 641
Score = 145 (56.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 4 EVIEVWGTWEELLLGGAVLRHGTRDWNLVAAELRARTVCPYTVTPEMCKAHYEDLQQRF 62
++ +VWGTWEEL+L AV RH DW+ VA E++AR+ V+ C+ Y+DL++RF
Sbjct: 47 QIKQVWGTWEELVLTCAVKRHAFSDWDSVAKEVQARSRSSLIVSAVNCRLKYQDLKRRF 105
Score = 128 (50.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 52/223 (23%), Positives = 89/223 (39%)
Query: 224 GQFARSSGADDQSGSLRK--DSIDDIKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILR 281
GQ RS G G ++ D + + + + + VF RL SQ YK++I +
Sbjct: 281 GQKYRSGGG---GGGVKSAGDKSQPLIDIIKLIRSHPRGSVFESRLRSQDTKDYKRLIRQ 337
Query: 282 HMDVDTXXXXXXXXXXXXXK-ELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKTMR 340
H+D+ T +RDL LL NA+VF+ ++ E +A LRT+V M+
Sbjct: 338 HLDMKTIEKKMEKGSYVSSSLSFYRDLKLLFTNAIVFFPTSSSESIAAQELRTLVSNEMK 397
Query: 341 QYFKDNEYGNKXXXXXXXXXXXXHKPPVKPRTARPGRSKLSLKAANAGNPADKPLSRAKK 400
+ + + G+ K V P + K S A +P+ + +K
Sbjct: 398 K--RTGKLGHCVIKSEAESSVSRQKSSVLSLV--PCKKKSS--ALKKTSPSSSSRQKDEK 451
Query: 401 PSNVDSPSSMESLTLTKKSLSRKVGRTNASQRAESATRGRKRS 443
S S + + T T + S + + A+ GR ++
Sbjct: 452 KSQEVSEEKIVTTTATTSARSSRRTSKEIAVVAKDTKTGRAKN 494
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 216 KENSTPVSGQFARSSGADDQ 235
KE + +G+ R SG DD+
Sbjct: 614 KETAEVATGKRGRESGKDDK 633
Score = 39 (18.8 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 368 VKPRTARPGRSKLSLKAANAGNPADKPLSRAKKPSNV 404
VKPR R K ++ N + + + K+ + V
Sbjct: 583 VKPRELRSSTGKKKVEVENNNSKSSSKRKQTKETAEV 619
Score = 39 (18.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 386 NAGNPADKPLSRAKKPSNVDSPSSMES 412
N+ NP P+++A+ P + S S
Sbjct: 233 NSRNPDPDPVNKAETPEEEERTVSKRS 259
Score = 38 (18.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 67 SLESKLETLKAERGDDCQVDNDCSQTESPVPCQKSDAVVCSSKETSKDGLSAGSFT 122
+++ + +T DD + S+TE K +V K K+ G T
Sbjct: 495 NIKKQTDTKTESSDDDDDEKEENSKTEKKTVADKKKSVADFLKRIKKNSPQKGKET 550
>TAIR|locus:2050574 [details] [associations]
symbol:AT2G44430 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR017877
PROSITE:PS50090 EMBL:AC004521 HOGENOM:HOG000242892
ProtClustDB:CLSN2718100 EMBL:AY120707 EMBL:BT009664 IPI:IPI00538687
PIR:T02398 RefSeq:NP_181971.1 UniGene:At.43353
ProteinModelPortal:O64877 SMR:O64877 PRIDE:O64877
EnsemblPlants:AT2G44430.1 GeneID:819050 KEGG:ath:AT2G44430
TAIR:At2g44430 eggNOG:NOG318143 InParanoid:O64877 OMA:PIIVCRK
PhylomeDB:O64877 ArrayExpress:O64877 Genevestigator:O64877
Uniprot:O64877
Length = 646
Score = 147 (56.8 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 31/83 (37%), Positives = 51/83 (61%)
Query: 7 EVWGTWEELLLGGAVLRHGTRDWNLVAAELRARTVCPYTV-TPEMCKAHYEDLQQRFYGC 65
+ WGTWEELLL AV RHG DW+ VA E+R+R+ + + + C+ Y DL++RF+
Sbjct: 48 QAWGTWEELLLACAVKRHGFGDWDSVATEVRSRSSLSHLLASANDCRHKYRDLKRRFHEQ 107
Query: 66 KSLESKLETLKAERGDDCQVDND 88
+ + T++ E ++ +V N+
Sbjct: 108 EKTDVTA-TVEEEEEEEERVGNN 129
Score = 124 (48.7 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 217 ENSTPVSGQFARSSGADDQSGSLR--KDSIDDIKGVFESVAQNESAFVFRHRLDSQKRGR 274
E+ T S ++ R +G +R + + + + + + +F RL SQ+
Sbjct: 281 ESGTSES-KWKRKRRKQGGAGEIRSAESKSQPLISLLDLIRSHPRGSLFERRLRSQEAKD 339
Query: 275 YKKMILRHMDVDTXXXXXXXXXXXXXKELF-RDLLLLANNAVVFYSKNTREHKSAFLLRT 333
YK M+ +H+D++T +F RDL LL NA+VF+ ++ E +A LR
Sbjct: 340 YKSMVKQHLDIETIQRKLKQGSYDSSSLIFYRDLQLLFTNAIVFFPLSSSESMAAHELRA 399
Query: 334 IVLKTMRQ 341
+V + MR+
Sbjct: 400 VVSQEMRK 407
Score = 46 (21.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 219 STPVSGQFARSSGADDQSGSLRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRGRYKK 277
++P S F++ +++ S KD+I GV S N+ A V + + K GR K+
Sbjct: 460 ASPSSSSFSQKDDTKEETLSEEKDNI--ATGVRSSRRANKVAAVVANNTKTGK-GRNKQ 515
Score = 37 (18.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 14/56 (25%), Positives = 22/56 (39%)
Query: 383 KAANAGNPADKPLSRAKKPSNVDSPSSMESLTLTKKSLSRKVGRTNASQRAESATR 438
K A A + +SR + S+ D + K RK G + AES ++
Sbjct: 255 KDATAAEEEEGSVSRGSEASHSDELGESGTSESKWKRKRRKQGGAGEIRSAESKSQ 310
>TAIR|locus:2060040 [details] [associations]
symbol:AT2G42150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 EMBL:AC002561
Gene3D:1.20.920.10 SUPFAM:SSF47370 UniGene:At.42743
UniGene:At.42745 IPI:IPI00537143 PIR:T00925 RefSeq:NP_181745.1
ProteinModelPortal:O48523 SMR:O48523 PaxDb:O48523 PRIDE:O48523
EnsemblPlants:AT2G42150.1 GeneID:818815 KEGG:ath:AT2G42150
TAIR:At2g42150 eggNOG:NOG244537 HOGENOM:HOG000242892
InParanoid:O48523 OMA:LMNETIS PhylomeDB:O48523
ProtClustDB:CLSN2718100 ArrayExpress:O48523 Genevestigator:O48523
Uniprot:O48523
Length = 631
Score = 136 (52.9 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 7 EVWGTWEELLLGGAVLRHGTRDWNLVAAELRARTVCPYTVTPEMCKAHYEDLQQRF 62
+ W TWEELLL AV RHGT WN V+AE++ + ++T C+ Y DL+ RF
Sbjct: 14 QTWSTWEELLLACAVHRHGTESWNSVSAEIQKLSPNLCSLTASACRHKYFDLKSRF 69
Score = 117 (46.2 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 55/221 (24%), Positives = 88/221 (39%)
Query: 233 DDQSGSLRKD-SIDD--IKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTXX 289
+DQS + KD +++ + E + + F RL+ Q+ Y +I H+D +
Sbjct: 259 EDQSPTSAKDFTVESQPLISFVEILLSHPCGSHFSRRLERQETIEYGTIIREHVDFEIIR 318
Query: 290 XXXXXXXXXXXK-ELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKTMRQYFKDNEY 348
+ FRDLLLL NNA VFY + + E K A L +V K M K
Sbjct: 319 KRVEGGLYKSWRINFFRDLLLLVNNARVFYHRGSSEFKFAEQLHQLVKKQMTTTLKGLSN 378
Query: 349 GNKXXXXXXXXXXXXHKPPVKPRTARPGRSKLSLKAANAGNP-ADKPLSRAKKPSNVDSP 407
++ P KP +++P S ++ A + A KPL + +
Sbjct: 379 RDEISISPPKEEVVAI-PSSKPVSSKPRMSVPNIVACRKRSALAAKPLLLLPPGPDKKAK 437
Query: 408 SSMESLTLTKKSLSRKVGRTNASQRAESA-----TRGRKRS 443
+ + +K +S K G + +S TRGR S
Sbjct: 438 KTDHVVDYDEKPVSDKDGEASGKDDDDSLIVKIMTRGRTSS 478
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 190 SRDVKEGSVGESDFLGVPDAKPVYRRKENSTP 221
+RD S + + + +P +KPV + S P
Sbjct: 378 NRDEISISPPKEEVVAIPSSKPVSSKPRMSVP 409
>TAIR|locus:2095878 [details] [associations]
symbol:AT3G57980 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487 Pfam:PF00249
Pfam:PF00439 PROSITE:PS50014 SMART:SM00297 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
InterPro:IPR017930 PROSITE:PS51294 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL132977 HOGENOM:HOG000242892
ProtClustDB:CLSN2718100 IPI:IPI00525752 PIR:T46020
RefSeq:NP_191357.1 UniGene:At.28706 ProteinModelPortal:Q9M2Q0
SMR:Q9M2Q0 PRIDE:Q9M2Q0 EnsemblPlants:AT3G57980.1 GeneID:824967
KEGG:ath:AT3G57980 TAIR:At3g57980 InParanoid:Q9M2Q0 OMA:ESMDESK
PhylomeDB:Q9M2Q0 Genevestigator:Q9M2Q0 Uniprot:Q9M2Q0
Length = 632
Score = 106 (42.4 bits), Expect = 9.8e-10, Sum P(3) = 9.8e-10
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 234 DQSGSLRKDSIDD--IKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTXXXX 291
DQS ++ K ++ + E + + F RL++Q+ Y ++I +H+D +
Sbjct: 263 DQSLTVNKIFVESQPLSDFIEILQSHPIGSHFSRRLETQETSDYYRIIRQHIDFEMIRSR 322
Query: 292 XXXXXXXXXK-ELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKTM 339
+ + FRDLLLL NN VFY + + E +A L ++ K M
Sbjct: 323 VEEGYYKTARTKFFRDLLLLINNVRVFYGEPSPEFNAAKQLYQLIKKQM 371
Score = 104 (41.7 bits), Expect = 9.8e-10, Sum P(3) = 9.8e-10
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 13 EELLLGGAVLRHGTRDWNLVAAELRARTVCPYTVTPEMCKAHYEDLQQRF 62
EELLL AV RHGT W+ VA+E+ + T+T C+ Y DL++RF
Sbjct: 2 EELLLACAVHRHGTDSWDSVASEVHKQNSTFRTLTAIDCRHKYNDLKRRF 51
Score = 50 (22.7 bits), Expect = 9.8e-10, Sum P(3) = 9.8e-10
Identities = 22/75 (29%), Positives = 33/75 (44%)
Query: 374 RPGRSKLSLKAANAGNPADKPLSRAKKPS-NVDSPSSMESLTLTKK---SLSRKVGRTNA 429
R SK S K PA + K+P+ SP+ S +K+ SL K +
Sbjct: 558 RKSNSK-SEKVDAVKLPAGQKRLTGKRPTIEKGSPTKKNSGVASKRGTASLMAKRDSETS 616
Query: 430 SQRAESATRGRKRSR 444
+ S+TR +KRS+
Sbjct: 617 EKETGSSTRPKKRSK 631
>FB|FBgn0039654 [details] [associations]
symbol:Brd8 "Brd8" species:7227 "Drosophila melanogaster"
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
InterPro:IPR001487 Pfam:PF00439 PROSITE:PS50014 SMART:SM00297
GO:GO:0010629 Gene3D:1.20.920.10 SUPFAM:SSF47370
FlyBase:FBgn0039654 EMBL:AY069837 ProteinModelPortal:Q8T9B8
SMR:Q8T9B8 STRING:Q8T9B8 PRIDE:Q8T9B8 InParanoid:Q8T9B8
ArrayExpress:Q8T9B8 Bgee:Q8T9B8 Uniprot:Q8T9B8
Length = 874
Score = 121 (47.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 37/145 (25%), Positives = 61/145 (42%)
Query: 191 RDVKEGSVGESDFLGVPDAKPVY--RRKENSTPVSGQFARSSGADDQSGSLRKDSIDDIK 248
RD E + + D D RR+ +STPV S + + + R+ K
Sbjct: 677 RDRSESPMVDDDATTASDHSTARSTRRRCSSTPVIDSIPNSPASSEHTDDRRETRAASKK 736
Query: 249 ---GVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTXXXXXXXXXXXXXKELFR 305
++ + ++ A F+ + R+ + LR MD T EL R
Sbjct: 737 LFLSIYAMLLDSKHAAPFKRPFHDEHAQRHADLCLRPMDFPTIKRNIDSGFIRSLSELHR 796
Query: 306 DLLLLANNAVVFYSKNTREHKSAFL 330
D+LL+A+N +V Y +T +HK+A L
Sbjct: 797 DVLLMAHNVLVAYKPHTTQHKTARL 821
Score = 59 (25.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 6 IEVWGTWEELLLGGAVLRHGTRDWNLVAAELRARTVC 42
++ W E+L+L AV G ++W V+ L+ T+C
Sbjct: 16 LDTWSKREQLILASAVSCSGDQNWITVSRTLK--TIC 50
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 446 399 0.00097 117 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 617 (66 KB)
Total size of DFA: 244 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 33.41u 0.08s 33.49t Elapsed: 00:00:01
Total cpu time: 33.42u 0.08s 33.50t Elapsed: 00:00:02
Start: Fri May 10 09:49:07 2013 End: Fri May 10 09:49:09 2013