BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013304
(446 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8R3B7|BRD8_MOUSE Bromodomain-containing protein 8 OS=Mus musculus GN=Brd8 PE=1 SV=2
Length = 951
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 219 STPVSGQFARSSGADDQSGSLRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRGRYKKM 278
S+P S QF+ S D ++ +K I V+ + A + A VF + Y +
Sbjct: 762 SSPASSQFSVCS-EDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSI 820
Query: 279 ILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKT 338
+ R MD+ TI+ I + I S E RD++L+ NAV++ S + + A ++ VL+
Sbjct: 821 VQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQ 880
Query: 339 MRQYF 343
++Q+
Sbjct: 881 IQQFL 885
>sp|Q9H0E9|BRD8_HUMAN Bromodomain-containing protein 8 OS=Homo sapiens GN=BRD8 PE=1 SV=2
Length = 1235
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 219 STPVSGQFARSSGADDQSGSLRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRGRYKKM 278
S+P S QF+ S D ++ +K I V+ + A + A VF + Y +
Sbjct: 689 SSPASSQFSVCS-EDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSI 747
Query: 279 ILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKT 338
+ R MD+ TI+ I + I S E RD++L+ NAV++ S + + A ++ VL+
Sbjct: 748 VQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQ 807
Query: 339 MRQYF 343
++Q+
Sbjct: 808 IQQFL 812
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 49/91 (53%)
Query: 250 VFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLL 309
V++ +A + + F + ++ YK ++ R MD+ +++ +S I ++ + RDL+L
Sbjct: 1115 VWKMIASHRFSSPFLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLML 1174
Query: 310 LANNAVVFYSKNTREHKSAFLLRTIVLKTMR 340
+ NAV++ + + A +R VL+ ++
Sbjct: 1175 MFQNAVMYNDSDHHVYHMAVEMRQEVLEQIQ 1205
>sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens
GN=BRPF3 PE=1 SV=2
Length = 1205
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 247 IKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRD 306
++ + + + + A +F ++ + Y + I + MD T+R K+ SH +++E D
Sbjct: 598 LRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEED 657
Query: 307 LLLLANNAVVFYSKNTREHKSAFLLRTIVLKTMRQYFKDNE-YGNKPTTSFLSPSSP 362
L+ N + + +K+T H++A LR + +R + E G P P SP
Sbjct: 658 FNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERGTHLPESP 714
>sp|P21675|TAF1_HUMAN Transcription initiation factor TFIID subunit 1 OS=Homo sapiens
GN=TAF1 PE=1 SV=2
Length = 1872
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 260 AFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYS 319
++ F H ++ + Y K+I+ MD++TIR IS H S + D+ L+ N+V +
Sbjct: 1525 SWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNG 1584
Query: 320 KNTREHKSAFLLRTIVLKTMRQY 342
++ K+A + + +T+ +Y
Sbjct: 1585 PESQYTKTAQEIVNVCYQTLTEY 1607
>sp|Q8IZX4|TAF1L_HUMAN Transcription initiation factor TFIID subunit 1-like OS=Homo sapiens
GN=TAF1L PE=1 SV=1
Length = 1826
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%)
Query: 260 AFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYS 319
++ F H ++ + Y KMI+ +D++TIR IS H S + D+ L+ N+V +
Sbjct: 1544 SWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNG 1603
Query: 320 KNTREHKSAFLLRTIVLKTMRQY 342
++ K+A + I +T+ +Y
Sbjct: 1604 PESQYTKTAQEIVNICYQTITEY 1626
>sp|Q60544|TAF1_MESAU Transcription initiation factor TFIID subunit 1 OS=Mesocricetus
auratus GN=TAF1 PE=2 SV=1
Length = 1865
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 260 AFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYS 319
++ F H ++ + Y K+I+ MD++TIR IS H S + D+ L+ N+V +
Sbjct: 1520 SWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNG 1579
Query: 320 KNTREHKSAFLLRTIVLKTMRQY 342
++ K+A + + +T+ +Y
Sbjct: 1580 SESQYTKTAQEIVNVCYQTLTEY 1602
>sp|Q80UV9|TAF1_MOUSE Transcription initiation factor TFIID subunit 1 OS=Mus musculus
GN=Taf1 PE=2 SV=2
Length = 1891
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 260 AFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYS 319
++ F H ++ + Y K+I+ MD++TIR IS H S + D+ L+ N+V +
Sbjct: 1546 SWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNG 1605
Query: 320 KNTREHKSAFLLRTIVLKTMRQY 342
++ K+A + + +T+ +Y
Sbjct: 1606 PESQYTKTAQEIVNVCHQTLTEY 1628
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 260 AFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYS 319
++ FR ++ + Y K++ MD T++SK S S +++E DL L+ N ++Y
Sbjct: 1326 SWPFREPFNADEIEDYTKVVTTPMDFQTMQSKCSCGSYQTVQEFLNDLKLVFGNTELYYE 1385
Query: 320 KNTREHKSAFLLRTIVLKTMRQYFKDNEYGNKPTTSFLSPSSPLHKPPVKPRTARPGRSK 379
+ + L+ Q +D + P ++ P +P TA PGR +
Sbjct: 1386 AGSSQ--------LSCLEKTEQCARDLLGKHLPAHTYQRRHRKHQSPEPEPETANPGRGR 1437
>sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1 SV=1
Length = 1689
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 275 YKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTI 334
Y I + MD++ IRS + ++ I + D +++ NNA + + +K A +L +
Sbjct: 696 YYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKV 755
Query: 335 VLKTMRQYFKDNEYGNKPTTSFL 357
+L+T R + +E + P + L
Sbjct: 756 LLETRRD-LEGDEDSHVPNVTLL 777
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 275 YKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTI 334
Y +++ + +D+ I+ K+ + L D LL NNA +Y ++ E+K+A L +
Sbjct: 84 YYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDL 143
Query: 335 VLKTMRQYFKDNE 347
L+T ++ + E
Sbjct: 144 YLRTRNEFVQKGE 156
>sp|Q84XV2|GTE1_ARATH Transcription factor GTE1 OS=Arabidopsis thaliana GN=GTE1 PE=2 SV=1
Length = 386
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 250 VFESVAQNESAFVFRHRLDSQKRG--RYKKMILRHMDVDTIRSKISSHSIMSIKELFRDL 307
+F +AQ++ A+ F +D + G Y K+I + MD+ TI+ K+ S +++E++ D+
Sbjct: 117 MFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADV 176
Query: 308 LLLANNAVVF 317
L+ NA+ +
Sbjct: 177 RLVFKNAMRY 186
>sp|Q8BSQ9|PB1_MOUSE Protein polybromo-1 OS=Mus musculus GN=Pbrm1 PE=1 SV=4
Length = 1634
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 275 YKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTI 334
Y I + MD++ IRS + ++ I + D +++ NNA + + +K A +L +
Sbjct: 696 YYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKV 755
Query: 335 VLKTMRQYFKDNEYGNKPTTSFL 357
+L+T R + +E + P + L
Sbjct: 756 LLETRRD-LEGDEDSHVPNVTLL 777
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 275 YKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTI 334
Y +++ + +D+ I+ K+ + L D LL NNA +Y ++ E+K+A L +
Sbjct: 84 YYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDL 143
Query: 335 VLKTMRQYFKDNE 347
L+T ++ + E
Sbjct: 144 YLRTRNEFVQKGE 156
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 247 IKGVFESVAQNESAFVFRHRLDSQKRG--RYKKMILRHMDVDTIRSKISSHSIMSIKELF 304
IK V + + ++ ++ F+ +D++K Y K+I + MD+ TI+ ++ ++ S KE
Sbjct: 43 IKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETI 102
Query: 305 RDLLLLANNAVVF 317
+D + NN V+
Sbjct: 103 QDFNTMFNNCYVY 115
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 12/178 (6%)
Query: 173 QVGSLKKRRGKRKRKDCSRDVKEGSVGESDFLGVPDAKPVYRRKENSTPVSGQFARSSGA 232
Q+ K KR RK E S S L +P R+ + S VS G
Sbjct: 1957 QIKGKKSNEQKRGRKLPGDTEDEDSATTSTSLKRGKTEPKKRKMDESVSVS------QGK 2010
Query: 233 DDQSGSLRKDSIDDIKG------VFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVD 286
+ +++K DD K + + +E A+ F ++ + YKK+I + MD
Sbjct: 2011 QENFTAIKKPKRDDSKDLAICSMILSELETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFS 2070
Query: 287 TIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKTMRQYFK 344
TIR K++S +++ D+ L+ +N F ++ ++ +R K + FK
Sbjct: 2071 TIRDKLTSGQYPNVEAFSLDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTEIFK 2128
>sp|Q15326|ZMY11_HUMAN Zinc finger MYND domain-containing protein 11 OS=Homo sapiens
GN=ZMYND11 PE=1 SV=2
Length = 602
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 267 LDSQKRGR------YKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSK 320
+D K+G+ Y++++ +DV TI+ K++ S +E D LL +N V+FY
Sbjct: 174 IDLNKKGKDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGA 233
Query: 321 NTREHKSAFLLRTIVLKTMR--QYFKDNEY--GNKPTTSFLSPSSPLHK 365
++ + A +L + Q K+ Y +P F P P H+
Sbjct: 234 DSEQADIARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHE 282
>sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus GN=PBRM1 PE=1 SV=1
Length = 1633
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 275 YKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTI 334
Y I + +D++ IRS + ++ I + D +++ NNA + + +K A +L +
Sbjct: 694 YYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKV 753
Query: 335 VLKTMRQYFKDNEYGNKPTTSFL 357
+L+T R+ + +E + P + L
Sbjct: 754 LLETRRE-IEGDEDSHVPNVTLL 775
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 275 YKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTI 334
Y +++ + +D+ I+ K+ + L D LL NNA +Y ++ E+K+A L +
Sbjct: 85 YYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWEL 144
Query: 335 VLKTMRQYFK 344
L+T ++ +
Sbjct: 145 YLRTKNEFVQ 154
>sp|Q8R5C8|ZMY11_MOUSE Zinc finger MYND domain-containing protein 11 OS=Mus musculus
GN=Zmynd11 PE=2 SV=2
Length = 602
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 267 LDSQKRGR------YKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSK 320
+D K+G+ Y++++ +DV TI+ K++ S +E D LL +N V+FY
Sbjct: 174 IDLNKKGKDSKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGA 233
Query: 321 NTREHKSAFLLRTIVLKTMR--QYFKDNEY--GNKPTTSFLSPSSPLHK 365
++ + A +L + Q K+ Y +P F P P H+
Sbjct: 234 DSEQADIARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHE 282
>sp|P34545|CBP1_CAEEL Protein cbp-1 OS=Caenorhabditis elegans GN=cbp-1 PE=2 SV=6
Length = 2017
Score = 38.1 bits (87), Expect = 0.13, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 240 RKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRG--RYKKMILRHMDVDTIRSKISSHSI 297
++D I + V+E + ++E A FR +D++ Y ++I R MD++T+ K+ +
Sbjct: 866 QEDLIKFLLPVWEKLDKSEDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQY 925
Query: 298 MSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVLKTMRQYFKDNEY 348
+ + D+ L+ +NA ++ KN++ +K L + + M K Y
Sbjct: 926 QNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEMFVSEMDPVMKSMGY 976
>sp|Q9ULI0|ATD2B_HUMAN ATPase family AAA domain-containing protein 2B OS=Homo sapiens
GN=ATAD2B PE=1 SV=3
Length = 1458
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 228 RSSGADDQSGSLRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDT 287
+S D + +LR+ + ++ V + +A ++ +F +D ++ Y ++I MD+ T
Sbjct: 949 KSRMEDQEENTLRELRLF-LRDVTKRLATDKRFNIFSKPVDIEEVSDYLEVIKEPMDLST 1007
Query: 288 IRSKISSHSIMSIKELFRDLLLLANNAVVF 317
+ +KI H+ ++ K+ +D+ L+ +NA+ +
Sbjct: 1008 VITKIDKHNYLTAKDFLKDIDLICSNALEY 1037
>sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens
GN=ATAD2 PE=1 SV=1
Length = 1390
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 247 IKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRD 306
++ V +A ++ VF +D + Y +I + MD+ ++ SKI H +++K+ RD
Sbjct: 993 LRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRD 1052
Query: 307 LLLLANNAVVF 317
+ L+ +NA+ +
Sbjct: 1053 IDLICSNALEY 1063
>sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-containing protein 1 OS=Mus musculus
GN=Brwd1 PE=1 SV=2
Length = 2304
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 236 SGSLRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSH 295
SG + D K + + Q E + FR +D + Y+ +I MD T+R + +
Sbjct: 1313 SGCIESDWRRQCKALLILIFQCEDSEPFRQPVDLDEYPDYRDIIDTPMDFGTVRETLEAG 1372
Query: 296 SIMSIKELFRDLLLLANNAVVFYSKNTREHKSAFLLRTIVL--KTMRQYFKDNEYGNK 351
+ S E +D+ L+ +NA Y+ N R + LR L + M++ D + G K
Sbjct: 1373 NYDSPVEFCKDIRLIFSNAKA-YTPNKRSKIYSMTLRLSALFEEKMKKISFDFKIGQK 1429
>sp|Q5RDX4|ATAD2_PONAB ATPase family AAA domain-containing protein 2 OS=Pongo abelii
GN=ATAD2 PE=2 SV=1
Length = 1091
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 247 IKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRD 306
++ V +A ++ VF +D + Y +I + MD+ ++ SKI H +++K+ RD
Sbjct: 824 LRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRD 883
Query: 307 LLLLANNAVVF 317
+ L+ +NA+ +
Sbjct: 884 IDLICSNALEY 894
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 239 LRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRG--RYKKMILRHMDVDTIRSKISSHS 296
LR+ + ++ ++ Q+ + FR +D Q G Y ++ MD+ TI+ K+ +
Sbjct: 1090 LRQALMPTLEALYR---QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQ 1146
Query: 297 IMSIKELFRDLLLLANNAVVFYSKNTREHK 326
+ D+ L+ NNA ++ K +R +K
Sbjct: 1147 YQEPWQYVDDVWLMFNNAWLYNRKTSRVYK 1176
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1
Length = 2442
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 239 LRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRG--RYKKMILRHMDVDTIRSKISSHS 296
LR+ + ++ ++ Q+ + FR +D Q G Y ++ MD+ TI+ K+ +
Sbjct: 1091 LRQALMPTLEALYR---QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQ 1147
Query: 297 IMSIKELFRDLLLLANNAVVFYSKNTREHK 326
+ D+ L+ NNA ++ K +R +K
Sbjct: 1148 YQEPWQYVDDVWLMFNNAWLYNRKTSRVYK 1177
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 239 LRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRG--RYKKMILRHMDVDTIRSKISSHS 296
LR+ + ++ ++ Q+ + FR +D Q G Y ++ MD+ TI+ K+ +
Sbjct: 1091 LRQALMPTLEALYR---QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQ 1147
Query: 297 IMSIKELFRDLLLLANNAVVFYSKNTREHK 326
+ D+ L+ NNA ++ K +R +K
Sbjct: 1148 YQEPWQYVDDVWLMFNNAWLYNRKTSRVYK 1177
>sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1
Length = 1828
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 319 SKNTREHKSAFLLRTIVLKTMRQYFKDNEYGNKPTTSFLSPSSPLHKPPVKPRTARPGRS 378
+K+T + +L++ K + + F+D+E PT++ S +PL + PVKP RPG++
Sbjct: 568 NKDTVFEEQIKVLKSSKFKMLPELFQDDEKAISPTSATSSGRTPLTRVPVKPTKGRPGQT 627
>sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2
Length = 1853
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 319 SKNTREHKSAFLLRTIVLKTMRQYFKDNEYGNKPTTSFLSPSSPLHKPPVKPRTARPGRS 378
+K+T + +L++ K + + F+D+E PT++ S +PL + PVKP RPG++
Sbjct: 568 NKDTVFEEQIKVLKSSKFKMLPELFQDDEKAISPTSATSSGRTPLTRVPVKPTKGRPGQT 627
>sp|Q8CDM1|ATAD2_MOUSE ATPase family AAA domain-containing protein 2 OS=Mus musculus
GN=Atad2 PE=1 SV=1
Length = 1040
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 40/71 (56%)
Query: 247 IKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRD 306
++ V +A ++ VF +D + Y +I + MD+ ++ SKI H +++K+ +D
Sbjct: 642 LRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLKD 701
Query: 307 LLLLANNAVVF 317
+ L+ +NA+ +
Sbjct: 702 IDLICSNALEY 712
>sp|O74964|RSC1_SCHPO Chromatin structure-remodeling complex subunit rsc1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rsc1 PE=1 SV=1
Length = 803
Score = 36.6 bits (83), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 263 FRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNT 322
F D + Y + I + M ++ I+ K+S H +I++ D L+ +NA F ++
Sbjct: 237 FERLPDPRMFPEYYQAIEQPMALEVIQKKLSKHRYETIEQFVDDFNLMFDNAKSFNDPSS 296
Query: 323 REHKSAFLLRTIVLKTMRQYFK--DNEYGNKPTTSFLSPSSP 362
+ ++ A L+ + +R D+E+ N T S SP P
Sbjct: 297 QVYRDADFLKNYLADVLRLEAGKLDSEFFNYETDSRASPQLP 338
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/95 (17%), Positives = 44/95 (46%)
Query: 250 VFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLL 309
+ + +++A+ F ++ + Y+++I MD T+R ++ S +E D LL
Sbjct: 1805 ILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADALL 1864
Query: 310 LANNAVVFYSKNTREHKSAFLLRTIVLKTMRQYFK 344
+ +N F ++ K+ ++R ++++
Sbjct: 1865 VFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQ 1899
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 275 YKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREH 325
Y +I MD+ TI+SK++ + +++E D+LL+ NN + T H
Sbjct: 293 YFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTPVH 343
>sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1
Length = 1829
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 336 LKTMRQYFKDNEYGNKPTTSFLSPSSPLHKPPVKPRTARPGRS 378
K + + F+D E PT++ S PL + PVKP ARPG++
Sbjct: 586 FKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQT 628
>sp|Q32S26|BRD2_BOVIN Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1
Length = 803
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 248 KGVFESVAQNESAFVFRHRLDSQKRGR--YKKMILRHMDVDTIRSKISSHSIMSIKELFR 305
K V +++ +++ A+ FR +D+ K G Y K+I + MD+ TI+ ++ ++ + E +
Sbjct: 84 KVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQ 143
Query: 306 DLLLLANNAVVF 317
D + N ++
Sbjct: 144 DFNTMFTNCYIY 155
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/95 (17%), Positives = 44/95 (46%)
Query: 250 VFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLL 309
+ + +++A+ F ++ + Y+++I MD T+R ++ S +E D LL
Sbjct: 1789 ILMEMESHDAAWPFLEPVNPRLVSGYRRVIKNPMDFSTMRERLLRGGYTSSEEFAADALL 1848
Query: 310 LANNAVVFYSKNTREHKSAFLLRTIVLKTMRQYFK 344
+ +N F ++ K+ ++R ++++
Sbjct: 1849 VFDNCQTFNEDDSEVGKAGHVMRRFFESRWEEFYQ 1883
>sp|Q7JJ13|BRD2_MOUSE Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1
Length = 798
Score = 35.8 bits (81), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 248 KGVFESVAQNESAFVFRHRLDSQKRGR--YKKMILRHMDVDTIRSKISSHSIMSIKELFR 305
K V +++ +++ A+ FR +D+ K G Y K+I + MD+ TI+ ++ ++ + E +
Sbjct: 83 KVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQ 142
Query: 306 DLLLLANNAVVF 317
D + N ++
Sbjct: 143 DFNTMFTNCYIY 154
>sp|P25440|BRD2_HUMAN Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2
Length = 801
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 248 KGVFESVAQNESAFVFRHRLDSQKRGR--YKKMILRHMDVDTIRSKISSHSIMSIKELFR 305
K V +++ +++ A+ FR +D+ K G Y K+I + MD+ TI+ ++ ++ + E +
Sbjct: 84 KVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQ 143
Query: 306 DLLLLANNAVVF 317
D + N ++
Sbjct: 144 DFNTMFTNCYIY 155
>sp|Q5TJG6|BRD2_CANFA Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3
SV=1
Length = 803
Score = 35.4 bits (80), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 248 KGVFESVAQNESAFVFRHRLDSQKRGR--YKKMILRHMDVDTIRSKISSHSIMSIKELFR 305
K V +++ +++ A+ FR +D+ K G Y K+I + MD+ TI+ ++ ++ + E +
Sbjct: 84 KVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQ 143
Query: 306 DLLLLANNAVVF 317
D + N ++
Sbjct: 144 DFNTMFTNCYIY 155
>sp|Q6MGA9|BRD2_RAT Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2
SV=1
Length = 798
Score = 35.4 bits (80), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 248 KGVFESVAQNESAFVFRHRLDSQKRGR--YKKMILRHMDVDTIRSKISSHSIMSIKELFR 305
K V +++ +++ A+ FR +D+ K G Y K+I + MD+ TI+ ++ ++ + E +
Sbjct: 83 KVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQ 142
Query: 306 DLLLLANNAVVF 317
D + N ++
Sbjct: 143 DFNTMFTNCYIY 154
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 236 SGSLRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRG--RYKKMILRHMDVDTIRSKIS 293
S S+ + ++ KG+ + + +++ F+ +D G Y +I MD+ TI+ K+
Sbjct: 514 SDSMNEKNLTFCKGLINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLD 573
Query: 294 SHSIMSIKELFRDLLLLANNAVVF 317
++ +IK+ D+ L+ NA+ +
Sbjct: 574 NNGYSTIKDFAADVRLMFENALTY 597
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 250 VFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLL 309
+ + +E A+ F ++ + YKK+I + MD TIR K+SS +++ D+ L
Sbjct: 2072 ILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRL 2131
Query: 310 LANNAVVFYSKNTREHKSAFLLRTIVLKTMRQYFK 344
+ +N F ++ ++ MR+YF+
Sbjct: 2132 VFDNCETFNEDDSDIGRAGH--------NMRKYFE 2158
>sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2
Length = 1855
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 319 SKNTREHKSAFLLRTIVLKTMRQYFKDNEYGNKPTTSFLSPSSPLHKPPVKPRTARPGR 377
+K+T + +L++ K + + F+D+E PT++ S +PL + P KP RPG+
Sbjct: 568 NKDTVFEEQIKVLKSSKFKMLPELFQDDEKAISPTSATSSGRTPLTRTPAKPTKGRPGQ 626
>sp|P51123|TAF1_DROME Transcription initiation factor TFIID subunit 1 OS=Drosophila
melanogaster GN=Taf1 PE=1 SV=3
Length = 2129
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 254 VAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANN 313
+ Q ++ F ++ ++ Y +I R MD++TI I +H S E D+ L+A N
Sbjct: 1608 IKQLPESWPFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAEYLADIELIATN 1667
Query: 314 AVVFYSKNTREHK 326
+ +TR K
Sbjct: 1668 CEQYNGSDTRYTK 1680
>sp|O80450|TGT3B_ARATH Trihelix transcription factor GT-3b OS=Arabidopsis thaliana
GN=GT-3B PE=1 SV=1
Length = 289
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 29 WNLVAAELRARTVCPYTVTPEMCKAHYEDLQQRFYGCKSLESKLETLKAERGDDCQ 84
W +++ ++R ++ + +PE CK +++L RF GC+++E++ + DD Q
Sbjct: 71 WEVISNKMRDKS---FPRSPEQCKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQ 123
>sp|Q8H1D7|GTE5_ARATH Transcription factor GTE5, chloroplastic OS=Arabidopsis thaliana
GN=GTE5 PE=1 SV=1
Length = 487
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 89/220 (40%), Gaps = 27/220 (12%)
Query: 112 SKDGLSAGSFTRETRTHWSPVSQIPAAVAAEEMETKTQGLLSSEQEKVSSSEKITAIVCG 171
S + +S G ++ + WS P + E ++ L+S S + +
Sbjct: 2 SSEHISGGGASKTKKHKWSSSQNRPKPMGVSRQE-RSVPLVSPSNSFASEDDHHMLKISL 60
Query: 172 GQVGSLKKRRGKRKRKDCSRDVKE------------GSVGESDFLGVPDAKPVYRRKENS 219
+ L+ R KRK K +V+ GS+ +S +G R K+
Sbjct: 61 SSISKLEVRNLKRKLKSELDEVRSLIKRFDPEANPGGSMAKSGVVG--------RSKKVK 112
Query: 220 TPVSGQFARSSGADDQSGSLRKDSIDDIKGVFESVAQNESAFVFRHRLDSQKRG--RYKK 277
T G GAD + + K+ + + +++SA+VF +D++ G Y
Sbjct: 113 TGNGGGKKSGHGADKGTVQIFKNC----NSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHN 168
Query: 278 MILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVF 317
++ MD+ T+++K+ S + D+ L NNA+++
Sbjct: 169 IVKEPMDLGTVKTKLGKSLYKSPLDFAEDVRLTFNNAILY 208
>sp|Q03330|GCN5_YEAST Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GCN5 PE=1 SV=1
Length = 439
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 40/82 (48%)
Query: 247 IKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRD 306
I+ + + + +A+ F ++ ++ Y I MD+ T+ K+ S+ +++ D
Sbjct: 336 IQNILTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIYD 395
Query: 307 LLLLANNAVVFYSKNTREHKSA 328
L+ NN ++ +NT +K A
Sbjct: 396 ARLVFNNCRMYNGENTSYYKYA 417
>sp|Q6FTW5|GCN5_CANGA Histone acetyltransferase GCN5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GCN5 PE=3 SV=1
Length = 546
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 41/82 (50%)
Query: 247 IKGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRD 306
I+ + + + +A+ F ++ ++ Y + I MD+ T+ K+ ++ ++E D
Sbjct: 443 IQNILVELQNHAAAWPFLRPVNKEEVPDYYEFIKEPMDLSTMELKLENNKYEKMEEFIYD 502
Query: 307 LLLLANNAVVFYSKNTREHKSA 328
L+ NN ++ +NT +K A
Sbjct: 503 ARLVCNNCRLYNGENTSYYKYA 524
>sp|Q9ESU6|BRD4_MOUSE Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1
Length = 1400
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Query: 215 RKENSTPVSGQFARSSGADDQSGSLRKDSIDD----IKGVF-ESVAQNESAFV--FRHRL 267
R+E+S PV + G + I + G+ E A+ +A+ F +
Sbjct: 322 RRESSRPVKPPKKDVPDSQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPV 381
Query: 268 DSQKRG--RYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYSKNTREH 325
D + G Y +I MD+ TI+SK+ S +E D+ L+ +N Y N +H
Sbjct: 382 DVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNC---YKYNPPDH 438
Query: 326 KSAFLLRTIVLKTMRQYFKDNEYGNKPTTSFLSPSSPLHKPPVK 369
+ + R + ++ K + +P + SP+ P PP K
Sbjct: 439 EVVAMARKLQDVFEMRFAKMPDEPEEPVVTVSSPAVP---PPTK 479
>sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens
GN=BRWD1 PE=1 SV=4
Length = 2320
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 248 KGVFESVAQNESAFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDL 307
K + + Q E + FR +D + Y+ +I MD T+R + + + S E +D+
Sbjct: 1323 KELVNLIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDI 1382
Query: 308 LLLANNAVVFYSKNTREHKSAFLLRTIVL--KTMRQYFKDNEYGNK 351
L+ +NA Y+ N R + LR L + M++ D + G K
Sbjct: 1383 RLIFSNAKA-YTPNKRSKIYSMTLRLSALFEEKMKKISSDFKIGQK 1427
>sp|Q9LNC4|GTE4_ARATH Transcription factor GTE4 OS=Arabidopsis thaliana GN=GTE4 PE=2 SV=1
Length = 766
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 249 GVFESVAQNESAFVFRHRLDSQKRG--RYKKMILRHMDVDTIRSKISSHSIMSIKELFRD 306
+ E + +++ +VF +D + G Y +I MD+ TI+S + + S +E D
Sbjct: 427 ALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPREFAED 486
Query: 307 LLLLANNAVVFYSKNTREHKSAFLLRTI 334
+ L +NA+ + + H A L I
Sbjct: 487 VRLTFHNAMTYNPEGQDVHLMAVTLLQI 514
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 17/133 (12%)
Query: 209 AKPVYRRKENSTPVSGQFA---------RSSGADDQSGSLRKDSIDDIKGVFESVAQNES 259
+KP RR+ P + QF+ R G QS L I + + +E
Sbjct: 1555 SKPSRRREH---PTASQFSPGESPASKKRRMGTRSQSPDLTFCEI-----ILMELESHED 1606
Query: 260 AFVFRHRLDSQKRGRYKKMILRHMDVDTIRSKISSHSIMSIKELFRDLLLLANNAVVFYS 319
A+ F ++ + Y+K+I MD T+R K+ + + +E D L+ +N +F
Sbjct: 1607 AWPFLEPVNPRLVPGYRKIIKNPMDFSTMRHKLLNGNYSRCEEFAEDAELIFSNCQLFNE 1666
Query: 320 KNTREHKSAFLLR 332
+ K+ +L+
Sbjct: 1667 DESDVGKAGLILK 1679
>sp|Q6C668|ECO1_YARLI N-acetyltransferase ECO1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=ECO1 PE=3 SV=1
Length = 271
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 360 SSPLHKP---PVKPRTARPGRSKLSLKAANAGNPADKPLSRAKKPSNVDSPSSME-SLTL 415
SSP P P++P P S+L++KAA A +P K KKP+ +P M SL
Sbjct: 21 SSPTQSPETSPLQP----PNESRLNIKAAQAVSPCQKRAKVVKKPAKTKAPVQMTLSLGQ 76
Query: 416 TKKSLSRKVGRT 427
T + + G T
Sbjct: 77 TTSTTCKTCGMT 88
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,085,221
Number of Sequences: 539616
Number of extensions: 6482989
Number of successful extensions: 16543
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 16404
Number of HSP's gapped (non-prelim): 230
length of query: 446
length of database: 191,569,459
effective HSP length: 121
effective length of query: 325
effective length of database: 126,275,923
effective search space: 41039674975
effective search space used: 41039674975
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)