Query 013308
Match_columns 445
No_of_seqs 227 out of 419
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 08:08:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013308.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013308hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bij_A Uncharacterized protein 99.5 4.2E-14 1.5E-18 138.5 13.8 188 58-316 2-262 (285)
2 4af8_A Metacaspase MCA2; hydro 99.3 5.6E-11 1.9E-15 121.2 17.7 204 55-303 88-333 (367)
3 4f6o_A Metacaspase-1; rossmann 99.2 8.7E-11 3E-15 119.1 15.6 134 54-227 48-201 (350)
4 3uoa_B Mucosa-associated lymph 98.8 1.2E-07 4.1E-12 97.5 17.4 177 58-302 4-200 (390)
5 2j32_A Caspase-3; Pro-caspase3 95.8 0.04 1.4E-06 52.9 10.1 182 58-303 15-217 (250)
6 4ehd_A Caspase-3; caspase, apo 95.7 0.077 2.6E-06 51.9 11.7 184 56-303 41-245 (277)
7 3sir_A Caspase; hydrolase; 2.6 95.6 0.11 3.8E-06 50.1 12.3 179 58-303 19-224 (259)
8 1m72_A Caspase-1; caspase, cys 95.5 0.056 1.9E-06 52.6 9.8 181 58-302 31-233 (272)
9 3h11_B Caspase-8; cell death, 95.1 0.12 4E-06 50.3 10.7 184 58-303 16-236 (271)
10 3od5_A Caspase-6; caspase doma 95.0 0.17 5.8E-06 49.3 11.6 121 56-225 18-145 (278)
11 1f1j_A Caspase-7 protease; cas 95.0 0.079 2.7E-06 52.5 9.4 182 58-303 68-273 (305)
12 2nn3_C Caspase-1; cysteine pro 94.7 0.18 6.1E-06 50.2 10.9 181 58-302 59-261 (310)
13 3e4c_A Caspase-1; zymogen, inf 94.4 0.39 1.3E-05 47.4 12.5 185 57-303 58-277 (302)
14 2h54_A Caspase-1; allosteric s 93.9 0.37 1.3E-05 44.2 10.3 117 58-224 42-170 (178)
15 1nw9_B Caspase 9, apoptosis-re 93.7 0.81 2.8E-05 44.2 13.0 119 58-224 20-152 (277)
16 2fp3_A Caspase NC; apoptosis, 93.2 0.5 1.7E-05 46.9 10.9 120 58-224 60-188 (316)
17 1pyo_A Caspase-2; apoptosis, c 84.6 4.6 0.00016 36.5 9.2 122 57-225 31-159 (167)
18 2dko_A Caspase-3; low barrier 79.2 2.5 8.6E-05 37.4 5.3 119 58-225 15-140 (146)
19 3h11_A CAsp8 and FADD-like apo 65.0 5.7 0.00019 38.6 4.5 110 58-222 42-154 (272)
20 1qtn_A Caspase-8; apoptosis, d 59.0 4 0.00014 36.8 2.0 120 58-225 22-155 (164)
21 3p45_A Caspase-6; protease, hu 49.8 7.9 0.00027 35.6 2.4 121 57-226 42-169 (179)
22 2ql9_A Caspase-7; cysteine pro 36.6 9.1 0.00031 34.9 0.6 118 58-224 43-167 (173)
23 2r8q_A Class I phosphodiestera 24.4 35 0.0012 34.3 2.5 25 68-92 96-121 (359)
24 1tbf_A CGMP-specific 3',5'-cyc 23.8 43 0.0015 33.5 3.0 25 68-92 97-122 (347)
25 1taz_A Calcium/calmodulin-depe 22.5 33 0.0011 34.6 1.9 25 68-92 78-103 (365)
26 3ca8_A Protein YDCF; two domai 21.3 72 0.0025 30.6 3.9 35 63-99 65-119 (266)
No 1
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=99.54 E-value=4.2e-14 Score=138.46 Aligned_cols=188 Identities=14% Similarity=0.149 Sum_probs=135.9
Q ss_pred CCeeEEEEeccCC----CC----Cch-hhhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccC
Q 013308 58 GTRWAVLLAGSNG----FW----NYR-HQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYK 128 (445)
Q Consensus 58 ~~~wAVlVagS~g----w~----NYR-HqaDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~ 128 (445)
+++||+||+-+++ |. +-+ =..|+..+.++|++.||+ |++++-+
T Consensus 2 ~~~~ALlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~~Gf~---v~~l~~~------------------------- 53 (285)
T 3bij_A 2 PKGIALALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAERGFA---VTTLMTK------------------------- 53 (285)
T ss_dssp CCEEEEEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHHTTCE---EEEEEGG-------------------------
T ss_pred CceEEEEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHHcCCc---eEEecCC-------------------------
Confidence 4789999999874 21 222 247899999999999997 6666522
Q ss_pred CccccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCC-------------CCcCCCCCCCCCHH
Q 013308 129 GVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP-------------GVLGMPTSRYIYAD 195 (445)
Q Consensus 129 gv~iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~-------------g~l~fpd~~~L~a~ 195 (445)
+.|.+++++.|..- +-+..|+|.+||||+|||.. ++|...|+ .|..+
T Consensus 54 ---------~~t~~~i~~al~~l----------~~~~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~-~i~~~ 113 (285)
T 3bij_A 54 ---------AATRAKVIDAIGKA----------AKALGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDG-ELIDD 113 (285)
T ss_dssp ---------GCCHHHHHHHHHHH----------HHHCCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSS-EEEHH
T ss_pred ---------ccCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCC-CccHH
Confidence 25888998887621 11346889999999999962 35555554 47788
Q ss_pred HHHHHHHHHHHcCCCceEEEEeecccccccccc----------------------cCC----------------------
Q 013308 196 ELIDVLKKKHASGNYKSLVFYLEACESGSIFEG----------------------LLP---------------------- 231 (445)
Q Consensus 196 dL~~~L~~M~~~~~Ykkmvf~iEAC~SGSmf~~----------------------llp---------------------- 231 (445)
+|.+.|+.+. .-+++++++|+|+||++.++ .+|
T Consensus 114 ~l~~~l~~l~---~~~~~~vilD~C~SG~~~~~~p~~~~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~ 190 (285)
T 3bij_A 114 ELYALLGKFA---AGVRVLVFSDSCHSGTVVKMAYYNGTTAARSAGPDEGEIRYRAMPQSVAMRTYRANREFYDTIQQKT 190 (285)
T ss_dssp HHHHHHTTSC---SSCEEEEEEECCCCCCHHHHHHTTC-------------CEESBCCHHHHHHHHHHTHHHHHHHHHHC
T ss_pred HHHHHHHhcc---CCCeEEEEEecCCCCccccccccccccccccccccccccceeecCchhhhhhhhcchhHHHHHhhhc
Confidence 9998887762 35789999999999998762 011
Q ss_pred -------CCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhhhcccccccccccccHHHHHHHHHhhccCC
Q 013308 232 -------EGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASY 304 (445)
Q Consensus 232 -------~~~nV~a~TASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~~ 304 (445)
...++++++|+.++|.||-.- . ..+||.+.++-..... ...|+.++++.|++++..
T Consensus 191 ~~~~~~~~~~~~i~lsa~~~~q~A~e~~----------~-----~G~FT~aLl~~L~~~~-~~~s~~~l~~~v~~~~~~- 253 (285)
T 3bij_A 191 KKVDLADVKASILLISGCQDNQLSQDGA----------F-----NGAFTGQLLRVWKNGL-YKGSYRSFHKAIVRRMPP- 253 (285)
T ss_dssp CCCCTTTCSSEEEEEESSCTTSCCEECS----------S-----SCHHHHHHHHHHGGGT-CCSCHHHHHHHHHHHSCT-
T ss_pred ccccccCCCCCEEEEEeCCCCccccccc----------c-----CCHHHHHHHHHHhhCC-CCcCHHHHHHHHHHhcCC-
Confidence 123689999999999998530 1 1578888876543222 246899999999998864
Q ss_pred CCCCCCceeecC
Q 013308 305 NSYGSHVMQYGD 316 (445)
Q Consensus 305 ~~~~Shv~~yGd 316 (445)
.+|++.||.
T Consensus 254 ---~Q~P~~~~~ 262 (285)
T 3bij_A 254 ---DQTPNFFTA 262 (285)
T ss_dssp ---TCCCEEEEE
T ss_pred ---CCCcceeCC
Confidence 589999885
No 2
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=99.30 E-value=5.6e-11 Score=121.24 Aligned_cols=204 Identities=17% Similarity=0.108 Sum_probs=133.8
Q ss_pred CCCCCeeEEEEeccCC--CCCchh-hhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 013308 55 DSVGTRWAVLLAGSNG--FWNYRH-QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (445)
Q Consensus 55 ~~~~~~wAVlVagS~g--w~NYRH-qaDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (445)
...+++|||||+-+.+ ..+-+- ..|+-.+.+.|++.||+.++|+++.-++ ..| +
T Consensus 88 ~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~GF~~~~i~~L~D~~-----~~p--~---------------- 144 (367)
T 4af8_A 88 LPGQTVRALFIGINYYGTSAALSGCCNDVKQMLATLQKRGLPINEAVILVDED-----NFP--G---------------- 144 (367)
T ss_dssp CTTCCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHTTCCCSEEEEEECCT-----TCT--T----------------
T ss_pred CCCCCeEEEEEEeCCCCCccCCCCHHHHHHHHHHHHHHcCCCchheEEecccc-----ccc--c----------------
Confidence 4458999999999843 122332 4789999999999999999999886432 111 1
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCC---------CC---cCCCCC---CCCCHHH
Q 013308 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP---------GV---LGMPTS---RYIYADE 196 (445)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~---------g~---l~fpd~---~~L~a~d 196 (445)
.....|.+|+++.|.-- +-+..|+|.+||||+|||.. |+ |.-.|. ..|..+|
T Consensus 145 ---~~~~pTr~nI~~aL~~L----------~~~a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~dde 211 (367)
T 4af8_A 145 ---RTDQPTRDNIVRYMAWL----------VKDAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVDDD 211 (367)
T ss_dssp ---CCBCCCHHHHHHHHHHH----------HHTCCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEHHH
T ss_pred ---cccCCCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccHHH
Confidence 13467999999988621 11346899999999999983 11 333331 2477788
Q ss_pred HHHHH-HHHHHcCCCceEEEEeecccccccccccC-----------------------CCCCcEEEEeecCCCCcccccc
Q 013308 197 LIDVL-KKKHASGNYKSLVFYLEACESGSIFEGLL-----------------------PEGLNIYATTASNAEESSWGTY 252 (445)
Q Consensus 197 L~~~L-~~M~~~~~Ykkmvf~iEAC~SGSmf~~ll-----------------------p~~~nV~a~TASn~~ESSya~y 252 (445)
|.+.| +.+ ..=.++++++|+|+||++.+--. +..-+++.++|+..+|.|.-..
T Consensus 212 L~~lLv~~l---~~g~~v~vIlD~ChSGt~~dlp~~~~~r~~~~~~~~~~~~~~~~~~~~~~~vi~~Sac~d~QtSad~~ 288 (367)
T 4af8_A 212 IHKLLFSRL---PEKVRLTAVFDCGHSGSIMDLPFTYVCSGGEQASGTPHMKRIREGNDVLGDVMMISGCADEQTSADVK 288 (367)
T ss_dssp HHHHHTTTC---CTTCEEEEEEECTTCCCCTTCSEEEECCTTCCTTSCCCCEECSSCCCCCSEEEEEEEECCCSCCCCCC
T ss_pred HHHHHHHhc---cCCCEEEEEEeCCCCCcccccccccccccccccccchhhhhhccCCCCCCCEEEEEecCCCCchhhhh
Confidence 87773 443 22369999999999999976100 0122688999999999988652
Q ss_pred CCCCCCCCCCCccccchhhhhhhhcccccccccccccHHHHHHHHHhhccC
Q 013308 253 CPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (445)
Q Consensus 253 c~~~~~~~~~~~~tcLgD~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (445)
-... -. .-+.--..+||+++++-... ...-|..++++.+++.+..
T Consensus 289 ~~~~--f~--~g~~~~~GafTyali~~L~~--~~~~Ty~~Ll~~vr~~l~~ 333 (367)
T 4af8_A 289 NTAT--FG--TGSTGAGGAATQCITCMLMN--NQSLSYGKLLIETRDMLKR 333 (367)
T ss_dssp -----------CCCBCBSHHHHHHHHHHHC--CSCCBHHHHHHHHHHHHHH
T ss_pred cccc--cc--ccccCcccHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHHH
Confidence 1000 00 00001236899998876543 2456888888888876653
No 3
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=99.24 E-value=8.7e-11 Score=119.14 Aligned_cols=134 Identities=25% Similarity=0.385 Sum_probs=93.3
Q ss_pred CCCCCCeeEEEEeccCC--CCCch-hhhHHHHHHHHHHh-CCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCC
Q 013308 54 DDSVGTRWAVLLAGSNG--FWNYR-HQADICHAYQLLRK-GGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKG 129 (445)
Q Consensus 54 ~~~~~~~wAVlVagS~g--w~NYR-HqaDv~~~YqiL~~-~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~g 129 (445)
....+++|||||+-+.+ +.+-+ =..|+-.+.++|++ .||++++|+++.-++ .+|
T Consensus 48 s~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~-----~~~----------------- 105 (350)
T 4f6o_A 48 SQCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQ-----NDL----------------- 105 (350)
T ss_dssp CCCCSCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTS-----SCG-----------------
T ss_pred CCCCCCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccc-----ccc-----------------
Confidence 34558999999999632 12223 23789999999987 599999998876432 111
Q ss_pred ccccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCC----------C---CcCCCCC---CCCC
Q 013308 130 VPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----------G---VLGMPTS---RYIY 193 (445)
Q Consensus 130 v~iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~----------g---~l~fpd~---~~L~ 193 (445)
....|.+|+++.|.- +. -+..|+|.+||||+|||.. | .|.-.|. ..|.
T Consensus 106 ------~~~pTr~nI~~aL~~----L~------~~a~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I~ 169 (350)
T 4f6o_A 106 ------VRVPTRANMIRAMQW----LV------KDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPII 169 (350)
T ss_dssp ------GGSCCHHHHHHHHHH----HH------TTCCTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCEE
T ss_pred ------ccCCCHHHHHHHHHH----HH------HhCCCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCccc
Confidence 124689999999862 11 1246899999999999973 2 2333331 2488
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEeeccccccccc
Q 013308 194 ADELIDVLKKKHASGNYKSLVFYLEACESGSIFE 227 (445)
Q Consensus 194 a~dL~~~L~~M~~~~~Ykkmvf~iEAC~SGSmf~ 227 (445)
.+||.+.|.+. ...=.++++|+|+|+||++.+
T Consensus 170 ddeL~~~L~~~--l~~g~~vt~IlD~ChSGt~ld 201 (350)
T 4f6o_A 170 DDEMHDIMVKP--LQQGVRLTALFDSCHSGTVLD 201 (350)
T ss_dssp HHHHHHHHTTT--CCTTCEEEEEECSSSCTTTTC
T ss_pred HHHHHHHHHhh--cCCCCeEEEEEccCCCCcccc
Confidence 88998877542 123468999999999999975
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=98.80 E-value=1.2e-07 Score=97.50 Aligned_cols=177 Identities=14% Similarity=0.138 Sum_probs=122.0
Q ss_pred CCeeEEEEeccCCC--CCchh-hhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccccC
Q 013308 58 GTRWAVLLAGSNGF--WNYRH-QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDY 134 (445)
Q Consensus 58 ~~~wAVlVagS~gw--~NYRH-qaDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~iDY 134 (445)
++++|+||+-+++- .+-+- ..|+-.+.+.|++.||+ ++++ .
T Consensus 4 ~~r~ALIIGn~~Y~~~~~L~ga~~DA~~L~~~L~~lGF~---V~~l--~------------------------------- 47 (390)
T 3uoa_B 4 KDKVALLIGNMNYREHPKLKAPLVDVYELTNLLRQLDFK---VVSL--L------------------------------- 47 (390)
T ss_dssp SCEEEEEEECCCCSSSCCCSTHHHHHHHHHHHHHHTTCE---EEEE--E-------------------------------
T ss_pred CCCEEEEEEecCCCCcccCCChHHHHHHHHHHHHHcCCe---EEEe--e-------------------------------
Confidence 68999999988763 22222 37899999999999996 2221 1
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCC----CCcCCCCCC-------CCCHHHHHHHHHH
Q 013308 135 TGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----GVLGMPTSR-------YIYADELIDVLKK 203 (445)
Q Consensus 135 ~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~----g~l~fpd~~-------~L~a~dL~~~L~~ 203 (445)
++|.+++.+.|.--. . ...+.|.+++||+|||.. ++|.--|.. .+..++|.+.|+.
T Consensus 48 ---DlT~~eI~~aL~~f~-------~---~~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~ 114 (390)
T 3uoa_B 48 ---DLTEYEMRNAVDEFL-------L---LLDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQE 114 (390)
T ss_dssp ---SCCHHHHHHHHHHHH-------H---TCCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHHH-------h---hCCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHHh
Confidence 357888888887211 1 124679999999999954 454333332 3566666666554
Q ss_pred HHHcCCCceEEEEeecccccccccc------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhhhc
Q 013308 204 KHASGNYKSLVFYLEACESGSIFEG------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWM 277 (445)
Q Consensus 204 M~~~~~Ykkmvf~iEAC~SGSmf~~------llp~~~nV~a~TASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~wm 277 (445)
. .=|..+|++|||+++..++. .+|...+++...|+.+++.||-..-++ . -|-+|+.+..
T Consensus 115 ~----~~K~kL~ILDACrg~~~~~~~~~~~~~ip~~ad~Li~yAT~pG~~A~r~~~d~-------~----~gS~FtqaL~ 179 (390)
T 3uoa_B 115 K----ETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQGAEAFEIQHSG-------L----ANGIFMKFLK 179 (390)
T ss_dssp T----TCSEEEEEEESCCCCCTTCCCCCCCCCCCCCSCEEEEESSCTTCCCEECSSCT-------T----CCCHHHHHHT
T ss_pred c----CCCceEEEEECCCCCCcccccccccccCcccCCcEEEEEcCCCcEeeecCCCC-------C----CCCHHHHHHH
Confidence 3 45678999999999755542 234556899999999999999763211 1 1457777777
Q ss_pred ccccccccccccHHHHHHHHHhhcc
Q 013308 278 EDSDIHNLRTETLHQQYELVKTRTA 302 (445)
Q Consensus 278 e~~~~~~l~~eTl~~qf~~Vk~~t~ 302 (445)
+-... ..+|.++|..|.+++.
T Consensus 180 e~L~~----~~dl~~LLt~Vn~~Va 200 (390)
T 3uoa_B 180 DRLLE----DKKITVLLDEVAEDMG 200 (390)
T ss_dssp TTTTC----SSCHHHHHHHHHHHHT
T ss_pred HHHcc----CCCHHHHHHHHHHHHh
Confidence 65542 5789999999999996
No 5
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=95.84 E-value=0.04 Score=52.85 Aligned_cols=182 Identities=13% Similarity=0.162 Sum_probs=108.8
Q ss_pred CCeeEEEEeccCCCC----Cchhhh--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 013308 58 GTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (445)
Q Consensus 58 ~~~wAVlVagS~gw~----NYRHqa--Dv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (445)
....|+||+=+++.. .-|..+ |+-.+-++|++.||. + ..+.
T Consensus 15 ~rg~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~---V--~~~~---------------------------- 61 (250)
T 2j32_A 15 EMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE---V--RNKN---------------------------- 61 (250)
T ss_dssp EEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE---E--EEEE----------------------------
T ss_pred CccEEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCE---E--EEEe----------------------------
Confidence 578999998887753 345554 899999999999995 2 2222
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcCCC
Q 013308 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (445)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Y 210 (445)
++|.+.+...|+-- . .+ +-...|-+++||.+||..|.+.--|+ .+.-++|.+.|..-+ ..-.=
T Consensus 62 ------dlt~~em~~~l~~~-~------~~--~~~~~d~~v~~~lsHG~~g~i~~~D~-~v~l~~i~~~f~~~~cp~L~g 125 (250)
T 2j32_A 62 ------DLTREEIVELMRDV-S------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTG 125 (250)
T ss_dssp ------SCCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTT
T ss_pred ------CCCHHHHHHHHHHH-H------Hh--hccCCCEEEEEECCCCCCCeEEecCC-cEEHHHHHHHhccccChhHcC
Confidence 45778888888721 1 11 11346778999999999987665454 355555544443200 00122
Q ss_pred ceEEEEeecccccccccc--------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhhh
Q 013308 211 KSLVFYLEACESGSIFEG--------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAW 276 (445)
Q Consensus 211 kkmvf~iEAC~SGSmf~~--------------llp~~~nV~a~TASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~w 276 (445)
|=-+|+|+||...-+-.+ .+|...++++.=|+-++.-||-. +--|-+|.-..
T Consensus 126 KPKlf~iqACRg~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~r~--------------~~~gS~fiq~L 191 (250)
T 2j32_A 126 KPKLFIIQACRGTELDCGIATDSGVDDDMACHKIPVEADFLYAYSTAPGYYSWRN--------------SKDGSWFIQSL 191 (250)
T ss_dssp SCEEEEEESCSEEECBCCCCC----------CCCCTTTTEEEEESSCTEECCEEE--------------TTTEEHHHHHH
T ss_pred CCeEEEEecccCCcccCCccccCCccccccccccCCCCCEEEEEeCCCccEEecC--------------CCCCcHHHHHH
Confidence 345889999975432111 13444456666666666555543 11233444333
Q ss_pred cccccccccccccHHHHHHHHHhhccC
Q 013308 277 MEDSDIHNLRTETLHQQYELVKTRTAS 303 (445)
Q Consensus 277 me~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (445)
.+.... .-..+.|.+.+..|.+++..
T Consensus 192 ~~~l~~-~~~~~dl~~ilt~V~~~V~~ 217 (250)
T 2j32_A 192 CAMLKQ-YADKLEFMHILTRVNRKVAT 217 (250)
T ss_dssp HHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHH-hCCCCCHHHHHHHHHHHHHH
Confidence 332221 12456899999999888864
No 6
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=95.70 E-value=0.077 Score=51.89 Aligned_cols=184 Identities=13% Similarity=0.168 Sum_probs=111.9
Q ss_pred CCCCeeEEEEeccCCCC----Cchhhh--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCC
Q 013308 56 SVGTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKG 129 (445)
Q Consensus 56 ~~~~~wAVlVagS~gw~----NYRHqa--Dv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~g 129 (445)
......|+||+=+++-. .-|.-+ |+-.+-++|++.||. |..+.
T Consensus 41 ~~~rg~aLIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~-------------------------- 89 (277)
T 4ehd_A 41 YPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKN-------------------------- 89 (277)
T ss_dssp SSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE--------------------------
T ss_pred CCCCCEEEEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEec--------------------------
Confidence 33678999999888753 356665 899999999999995 22222
Q ss_pred ccccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcC
Q 013308 130 VPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASG 208 (445)
Q Consensus 130 v~iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~ 208 (445)
++|.+.+...|.-- . .+ +-...|-++++|.+||..|.|.--|+. +.-++|...|..-. ..-
T Consensus 90 --------dlt~~em~~~l~~f-~------~~--dh~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL 151 (277)
T 4ehd_A 90 --------DLTREEIVELMRDV-S------KE--DHSKRSSFVCVLLSHGEEGIIFGTNGP-VDLKKITNFFRGDRCRSL 151 (277)
T ss_dssp --------SCCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHHTTSTTTCGGG
T ss_pred --------CCCHHHHHHHHHHH-H------hh--cccCCCEEEEEEEcCCCCCEEEEeCCc-EeHHHHHHHhhhccCchh
Confidence 46888888888731 1 11 123567888999999999977655553 55555444433100 001
Q ss_pred CCceEEEEeeccccccccccc--------------CCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhh
Q 013308 209 NYKSLVFYLEACESGSIFEGL--------------LPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSI 274 (445)
Q Consensus 209 ~Ykkmvf~iEAC~SGSmf~~l--------------lp~~~nV~a~TASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~ 274 (445)
.=|=-+|+|+||...-+-.++ +|...++++.=|+-++.-||-. +--|-+|.-
T Consensus 152 ~gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~yST~pG~vs~r~--------------~~~GS~fIq 217 (277)
T 4ehd_A 152 TGKPKLFIIQACRGTELDCGIETDSGVDDDMACHKIPVEADFLYACSTAPGYYSWRN--------------SKDGSWFIQ 217 (277)
T ss_dssp TTSCEEEEEESCCSSBCBCCCCC----------CCCCTTTTEEEEESSCTTBCCEEE--------------TTTEEHHHH
T ss_pred cCCccEEEEecCCCCcccCCccccCCccccccccccCCCCCEEEEEECCCCeEeecC--------------CCCCcHHHH
Confidence 234558999999865432221 2333456666565555555532 112334443
Q ss_pred hhcccccccccccccHHHHHHHHHhhccC
Q 013308 275 AWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (445)
Q Consensus 275 ~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (445)
...+....+ -..+.|.+++..|.+++..
T Consensus 218 ~L~~~l~~~-~~~~dl~~ilt~V~~~V~~ 245 (277)
T 4ehd_A 218 SLCAMLKQY-ADKLEFMHILTRVNRKVAT 245 (277)
T ss_dssp HHHHHHHHH-TTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCCCHHHHHHHHHHHHHH
Confidence 333322221 1346899999999988863
No 7
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=95.62 E-value=0.11 Score=50.12 Aligned_cols=179 Identities=16% Similarity=0.211 Sum_probs=105.2
Q ss_pred CCeeEEEEeccCCCC---Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccc
Q 013308 58 GTRWAVLLAGSNGFW---NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (445)
Q Consensus 58 ~~~wAVlVagS~gw~---NYRHq--aDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~i 132 (445)
....|+||+=+++-. .-|.- .|+-.+-++|++.||. |..+.
T Consensus 19 ~rg~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~LGF~-----V~~~~----------------------------- 64 (259)
T 3sir_A 19 NRGMALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFE-----VTVYK----------------------------- 64 (259)
T ss_dssp EEEEEEEEEECCC-----------CCHHHHHHHHHHHTTCE-----EEEEE-----------------------------
T ss_pred CccEEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEe-----------------------------
Confidence 568999999988753 34444 6899999999999996 33322
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHHHcC----
Q 013308 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASG---- 208 (445)
Q Consensus 133 DY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~~~~---- 208 (445)
++|.+.+...|.- .. .+ +-...|-+++||.+||..|.|.=-|+. -+|.+.++.+...+
T Consensus 65 -----dlt~~em~~~l~~-~~------~~--~h~~~d~~v~~~lsHG~~g~i~~~D~~----v~l~~i~~~f~~~~cpsL 126 (259)
T 3sir_A 65 -----DCRYKDILRTIEY-SA------SQ--NHSDSDCILVAILSHGEMGYIYAKDTQ----YKLDNIWSFFTANHCPSL 126 (259)
T ss_dssp -----ECSHHHHHHHHHH-HH------TS--CCTTEEEEEEEEEECTTCCCCCCTTHH----HHHHHTTGGGSTTTCGGG
T ss_pred -----CCCHHHHHHHHHH-HH------Hh--hccCCCEEEEEEecCCCCCeEEeCCCc----EEHHHHHHHhhhccCccc
Confidence 4678888888873 11 11 124568899999999999977433332 34444444443221
Q ss_pred CCceEEEEeecccccccccc------------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchh
Q 013308 209 NYKSLVFYLEACESGSIFEG------------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGD 270 (445)
Q Consensus 209 ~Ykkmvf~iEAC~SGSmf~~------------------llp~~~nV~a~TASn~~ESSya~yc~~~~~~~~~~~~tcLgD 270 (445)
.=|=-+|+|+||...-+-.+ .+|...++++.=|+-++.-||-. +--|-
T Consensus 127 ~gKPKlf~iQACRG~~~~~g~~~~~~~~~~dg~~~~~~~ip~~aD~Li~yST~pG~vs~r~--------------~~~GS 192 (259)
T 3sir_A 127 AGKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYSTVPGFYSWRN--------------TTRGS 192 (259)
T ss_dssp SSSCEEEEEEEETTSCEEC-----------------CEECCCCTTEEEEEEEECCSCCCSS--------------CCCSC
T ss_pred cCCCCEEEEecCCCCcccCCcccccCcccccCcccccccCCCCCCEEEEEECCCCeEeecC--------------CCCCc
Confidence 22455899999986543222 12333355555555555555432 11233
Q ss_pred hhhhhhcccccccccccccHHHHHHHHHhhccC
Q 013308 271 LYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (445)
Q Consensus 271 ~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (445)
+|.-...+-.... -..+.|.+++..|.+++..
T Consensus 193 ~fiq~L~~~l~~~-~~~~dl~~ilt~V~~~V~~ 224 (259)
T 3sir_A 193 WFMQSLCAELAAN-GKRLDILTLLTFVCQRVAV 224 (259)
T ss_dssp HHHHHHHHHHHHH-TTTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHH
Confidence 4443333322221 2346899999999998874
No 8
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=95.49 E-value=0.056 Score=52.61 Aligned_cols=181 Identities=17% Similarity=0.226 Sum_probs=109.8
Q ss_pred CCeeEEEEeccCCCC---Cchh--hhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccc
Q 013308 58 GTRWAVLLAGSNGFW---NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (445)
Q Consensus 58 ~~~wAVlVagS~gw~---NYRH--qaDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~i 132 (445)
....|+||+=+++-. .-|. ..|+-.+-++|++.||. |..+.
T Consensus 31 ~rg~aLIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~LGF~-----V~~~~----------------------------- 76 (272)
T 1m72_A 31 HRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFK-----VTVFP----------------------------- 76 (272)
T ss_dssp EEEEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE-----------------------------
T ss_pred CCCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEec-----------------------------
Confidence 578999998776542 2344 36789999999999994 22222
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcCCCc
Q 013308 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNYK 211 (445)
Q Consensus 133 DY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Yk 211 (445)
++|.+.+...|.-- . .+ +-...|-+++||.+||..|+|.--|+. +.-++|.+.|..-. ..-.=|
T Consensus 77 -----dlt~~em~~~l~~~-~------~~--dh~~~d~~v~~~lsHG~~~~i~~~D~~-v~l~~i~~~f~~~~cpsL~gK 141 (272)
T 1m72_A 77 -----NLKSEEINKFIQQT-A------EM--DHSDADCLLVAVLTHGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGK 141 (272)
T ss_dssp -----SCCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEETTEEECSSSE-ECTTHHHHTTSTTTCGGGTTS
T ss_pred -----CcCHHHHHHHHHHH-H------Hh--hcCCCCEEEEEEcCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCC
Confidence 46778888888721 1 11 113467889999999999988766664 66566655443210 001223
Q ss_pred eEEEEeecccccccccc----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhh
Q 013308 212 SLVFYLEACESGSIFEG----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (445)
Q Consensus 212 kmvf~iEAC~SGSmf~~----------------llp~~~nV~a~TASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~ 275 (445)
=-+|+|+||...-+-.+ .+|...++++.=|+-++.-||-. +--|-+|.-.
T Consensus 142 PKlffiqACRg~~~~~g~~~~~~~~d~~~~~~~~iP~~aD~Li~ysT~pG~vs~r~--------------~~~GS~fiq~ 207 (272)
T 1m72_A 142 PKLFFIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN--------------TTRGSWFMQA 207 (272)
T ss_dssp CEEEEEESCSSSBCBCCEEEEC---------CEEECTTCSEEEEESSCTTBCCEEE--------------TTTEEHHHHH
T ss_pred ceEEEEeCCCCCcccCCccccccccccccccccccCCCCCEEEEEeCCCCcEeecC--------------CCCCCHHHHH
Confidence 45889999985433111 13433456666666666665543 1123344443
Q ss_pred hcccccccccccccHHHHHHHHHhhcc
Q 013308 276 WMEDSDIHNLRTETLHQQYELVKTRTA 302 (445)
Q Consensus 276 wme~~~~~~l~~eTl~~qf~~Vk~~t~ 302 (445)
..+.... .-..+.|.+++..|.+++.
T Consensus 208 L~~~l~~-~~~~~dl~~ilt~V~~~V~ 233 (272)
T 1m72_A 208 LCEELRY-AGTERDILTLLTFVCQKVA 233 (272)
T ss_dssp HHHHHHH-HTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHh-hCCCCCHHHHHHHHHHHHH
Confidence 3332222 1234689999999998886
No 9
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=95.12 E-value=0.12 Score=50.32 Aligned_cols=184 Identities=16% Similarity=0.168 Sum_probs=109.4
Q ss_pred CCeeEEEEeccCCCC-----------Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCC
Q 013308 58 GTRWAVLLAGSNGFW-----------NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGD 124 (445)
Q Consensus 58 ~~~wAVlVagS~gw~-----------NYRHq--aDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~ 124 (445)
....|+||+=.++-. .-|.- .|+-.+-++|++.||. |..+.
T Consensus 16 ~rG~aLIInn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~--------------------- 69 (271)
T 3h11_B 16 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFE-----IKPHD--------------------- 69 (271)
T ss_dssp SCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE---------------------
T ss_pred CCCEEEEEEchhcCcccccccccccCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEe---------------------
Confidence 468999999877653 34544 5899999999999995 22222
Q ss_pred CccCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHH
Q 013308 125 DVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKK 204 (445)
Q Consensus 125 dvY~gv~iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M 204 (445)
++|.+.+..+|.-- . .+ +-...|-++++|.+||..|.|.--|+..+.-++|.+.|..-
T Consensus 70 -------------dlt~~em~~~l~~~-~------~~--~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~ 127 (271)
T 3h11_B 70 -------------DCTVEQIYEILKIY-Q------LM--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGL 127 (271)
T ss_dssp -------------SCCHHHHHHHHHHH-H------HS--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTT
T ss_pred -------------CCCHHHHHHHHHHH-H------Hh--cCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhc
Confidence 46888888888721 1 11 11346778888899999998876666545555555444310
Q ss_pred H-HcCCCceEEEEeecccccccccc-----------------------cCCCCCcEEEEeecCCCCccccccCCCCCCCC
Q 013308 205 H-ASGNYKSLVFYLEACESGSIFEG-----------------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGP 260 (445)
Q Consensus 205 ~-~~~~Ykkmvf~iEAC~SGSmf~~-----------------------llp~~~nV~a~TASn~~ESSya~yc~~~~~~~ 260 (445)
. ..-.=|=-+|+|.||...-+-.+ .+|...++++.=|+-++--||-.
T Consensus 128 ~CpsL~gKPKlffiQACRG~~~~~gv~~~~~~~~~~~~e~d~~~~~~~~iP~~aD~Li~yST~pG~vs~R~--------- 198 (271)
T 3h11_B 128 KCPSLAGKPKVFFIQACQGDNYQKGIPVETASEEQPYLEMALSSPQTRYIPDEADFLLGMATVNNCVSYRN--------- 198 (271)
T ss_dssp TCGGGTTSCEEEEEESCCSSBCC----------------------CCCCSCSSSSEEEEESSCTTBCCEEE---------
T ss_pred cChhhcCCccEEEEeccCCCcccCCceeccCCccccccccccccccccccCCCCceEEEEECCCCceeecC---------
Confidence 0 00122345899999976433111 12333355555555555555432
Q ss_pred CCCccccchhhhhhhhcccccccccccccHHHHHHHHHhhccC
Q 013308 261 PPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (445)
Q Consensus 261 ~~~~~tcLgD~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (445)
+--|-+|--...+-.....-..+.|.++|..|.+++..
T Consensus 199 -----~~~GS~fIq~L~~~l~~~~~~~~dl~~ilt~Vn~~V~~ 236 (271)
T 3h11_B 199 -----PAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSN 236 (271)
T ss_dssp -----TTTEEHHHHHHHHHHHHHGGGTCCHHHHHHHHHHHHHT
T ss_pred -----CCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhh
Confidence 11223443333332222111257899999999998874
No 10
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=95.04 E-value=0.17 Score=49.32 Aligned_cols=121 Identities=18% Similarity=0.242 Sum_probs=79.7
Q ss_pred CCCCeeEEEEeccCCCC----Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCC
Q 013308 56 SVGTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKG 129 (445)
Q Consensus 56 ~~~~~wAVlVagS~gw~----NYRHq--aDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~g 129 (445)
......|+||+=.++-. .-|.. .|+-.+-++|++.||. |..+.
T Consensus 18 ~~~rg~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~-------------------------- 66 (278)
T 3od5_A 18 HRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFE-----VKCFN-------------------------- 66 (278)
T ss_dssp SSBCCEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE--------------------------
T ss_pred CCCcCEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEec--------------------------
Confidence 33678999999988753 34544 5789999999999994 22222
Q ss_pred ccccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcC
Q 013308 130 VPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASG 208 (445)
Q Consensus 130 v~iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~ 208 (445)
++|.+.+..+|.- .. .+ +-...|-++++|.+||..|.|.--|+. +.-++|.+.|..-. ..-
T Consensus 67 --------dlt~~em~~~l~~-~~------~~--~h~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL 128 (278)
T 3od5_A 67 --------DLKAEELLLKIHE-VS------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSL 128 (278)
T ss_dssp --------SCCHHHHHHHHHH-HH------HS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHHTTSTTTCGGG
T ss_pred --------CCCHHHHHHHHHH-HH------hh--cccCCCEEEEEEECCCCCCEEEEeCCe-EEHHHHHHHhccccChhh
Confidence 4688888888873 11 11 113567788899999999987766665 66666555443210 000
Q ss_pred CCceEEEEeeccccccc
Q 013308 209 NYKSLVFYLEACESGSI 225 (445)
Q Consensus 209 ~Ykkmvf~iEAC~SGSm 225 (445)
.=|=-+|+|.||...-+
T Consensus 129 ~gKPKlffiQACRG~~~ 145 (278)
T 3od5_A 129 VGKPKIFIIQACRGNQH 145 (278)
T ss_dssp TTSCEEEEEESCCSSBC
T ss_pred cCCCcEEEEecCCCCcc
Confidence 22445899999986543
No 11
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=95.04 E-value=0.079 Score=52.54 Aligned_cols=182 Identities=15% Similarity=0.183 Sum_probs=109.0
Q ss_pred CCeeEEEEeccCCCCC----chhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 013308 58 GTRWAVLLAGSNGFWN----YRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (445)
Q Consensus 58 ~~~wAVlVagS~gw~N----YRHq--aDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (445)
....|+||+=+++..+ -|.. .|+-.+-++|++.||. +.+ +.
T Consensus 68 ~rg~aLIInN~~f~~~~~L~~R~G~~~Da~~L~~~f~~LGF~---V~~--~~---------------------------- 114 (305)
T 1f1j_A 68 KLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFD---VIV--YN---------------------------- 114 (305)
T ss_dssp EEEEEEEEECCCCCTTTTCCCCTTHHHHHHHHHHHHHHHTEE---EEE--EE----------------------------
T ss_pred CCCEEEEEechhcCCCccCccCCCcHHHHHHHHHHHHHCCCE---EEE--ec----------------------------
Confidence 5789999988877643 3444 6899999999999994 222 22
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcCCC
Q 013308 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (445)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Y 210 (445)
++|.+.+...|.- .. .+ .. ...|-+++||.+||..|+|.--|+ .+.-++|...|..-. ..-.=
T Consensus 115 ------dlt~~em~~~l~~-~~------~~-~h-~~~d~~vv~ilsHG~~~~i~g~D~-~v~l~~I~~~f~~~~CpsL~g 178 (305)
T 1f1j_A 115 ------DCSCAKMQDLLKK-AS------EE-DH-TNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDRSKTLLE 178 (305)
T ss_dssp ------SCCHHHHHHHHHH-HH------HS-CG-GGEEEEEEEEESCEETTEEECSSS-EEEHHHHHHTTSTTTCGGGTT
T ss_pred ------CcCHHHHHHHHHH-HH------Hh-hc-CCCCEEEEEEecCCCCCeEEecCC-eEEHHHHHHHhhhccChhhcC
Confidence 4577888888872 11 11 11 245778899999999997766565 355555544332100 00012
Q ss_pred ceEEEEeecccccccccc-----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhh
Q 013308 211 KSLVFYLEACESGSIFEG-----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYS 273 (445)
Q Consensus 211 kkmvf~iEAC~SGSmf~~-----------------llp~~~nV~a~TASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS 273 (445)
|=-+|+|+||...-+-.+ .+|...++++.=|+.++.-||-. +--|-+|.
T Consensus 179 KPKlffiQACRG~~~~~g~~~~~~~~~~~~~~~~~~ip~~aD~LiayST~pG~vs~r~--------------~~~GS~Fi 244 (305)
T 1f1j_A 179 KPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRS--------------PGRGSWFV 244 (305)
T ss_dssp SCEEEEEESCCSSBCBCCBC---------------CBCTTTTEEEEESSCTTBCCEEE--------------TTTEEHHH
T ss_pred CceEEEeccccCCcccCCccccCCcccccccccccccCCCCCEEEEEECCCCeeccCC--------------CCCCCHHH
Confidence 445889999976543222 12333456666666666555532 11233444
Q ss_pred hhhcccccccccccccHHHHHHHHHhhccC
Q 013308 274 IAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (445)
Q Consensus 274 ~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (445)
-...+-... .-....|.++|..|.+++..
T Consensus 245 qaL~~~l~~-~~~~~dl~~ilt~Vn~~V~~ 273 (305)
T 1f1j_A 245 QALCSILEE-HGKDLEIMQILTRVNDRVAR 273 (305)
T ss_dssp HHHHHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 333332221 12346899999999888864
No 12
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=94.68 E-value=0.18 Score=50.16 Aligned_cols=181 Identities=17% Similarity=0.213 Sum_probs=108.6
Q ss_pred CCeeEEEEeccCCCC---Cchh--hhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccc
Q 013308 58 GTRWAVLLAGSNGFW---NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (445)
Q Consensus 58 ~~~wAVlVagS~gw~---NYRH--qaDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~i 132 (445)
....|+||+=+++-. .-|. ..|+-.+-++|++.||. |..+.
T Consensus 59 ~rg~aLIInN~~F~~~~l~~R~Gt~~Da~~L~~~f~~LGF~-----V~~~~----------------------------- 104 (310)
T 2nn3_C 59 HRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFK-----VTVFP----------------------------- 104 (310)
T ss_dssp BCCEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE-----------------------------
T ss_pred CcCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEec-----------------------------
Confidence 578999998776542 2344 36789999999999994 22222
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcCCCc
Q 013308 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNYK 211 (445)
Q Consensus 133 DY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Yk 211 (445)
++|.+.+..+|.-- . .+ +-...|-+++||.+||..|+|.--|+. +.-++|.+.|..-. ..-.=|
T Consensus 105 -----dlt~~em~~~l~~f-~------~~--dh~~~D~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gK 169 (310)
T 2nn3_C 105 -----NLKSEEINKFIQQT-A------EM--DHSDADCLLVAVLTAGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGK 169 (310)
T ss_dssp -----SCCHHHHHHHHHHH-H------SS--CGGGBSCEEEEEEEEEETTEEECSSCE-ECTHHHHGGGSTTTCGGGTTS
T ss_pred -----CCCHHHHHHHHHHH-H------Hh--ccCCCCEEEEEEeCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCC
Confidence 46788888888721 1 11 112456788899999999988766664 66566555443200 001224
Q ss_pred eEEEEeecccccccccc----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhh
Q 013308 212 SLVFYLEACESGSIFEG----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (445)
Q Consensus 212 kmvf~iEAC~SGSmf~~----------------llp~~~nV~a~TASn~~ESSya~yc~~~~~~~~~~~~tcLgD~fS~~ 275 (445)
=-+|+|+||...-+-.+ .+|...++++.=|+-++.-||-. +--|-+|.-.
T Consensus 170 PKlffiQACRG~~~d~g~~~~~~~~d~~~~~~~~iP~~aD~LiayST~pG~vS~R~--------------~~~GSwFIqa 235 (310)
T 2nn3_C 170 PKLFFIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN--------------TTRGSWFMQA 235 (310)
T ss_dssp CEEEEEEEECCCCCCCCC-------------CCCCCCSTTEEEEECCCCCEEESSS--------------SEEEEHHHHH
T ss_pred ceEEEEecccCCccccCccccccccccccccccccCCCCCEEEEEeCCCCceeecC--------------CCCCCHHHHH
Confidence 45889999976433111 12333356665555555544432 2223455444
Q ss_pred hcccccccccccccHHHHHHHHHhhcc
Q 013308 276 WMEDSDIHNLRTETLHQQYELVKTRTA 302 (445)
Q Consensus 276 wme~~~~~~l~~eTl~~qf~~Vk~~t~ 302 (445)
..+.... .-..+.|.+++..|.+++.
T Consensus 236 L~~~l~~-~~~~~dl~~ilt~Vn~~V~ 261 (310)
T 2nn3_C 236 LCEELRY-AGTERDILTLLTFVCQKVA 261 (310)
T ss_dssp HHHHHHT-TTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHh-hCCCCCHHHHHHHHHHHHH
Confidence 4433322 2245789999999998886
No 13
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=94.38 E-value=0.39 Score=47.43 Aligned_cols=185 Identities=16% Similarity=0.165 Sum_probs=104.8
Q ss_pred CCCeeEEEEeccCCCC-Cchh--hhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcccc
Q 013308 57 VGTRWAVLLAGSNGFW-NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKD 133 (445)
Q Consensus 57 ~~~~wAVlVagS~gw~-NYRH--qaDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~iD 133 (445)
.+.+.|+||+=+++-. .-|. ..|+-.+-++|++.||. |..+.
T Consensus 58 ~~~r~aLII~N~~f~~l~~R~G~~~Da~~L~~~f~~LGF~-----V~~~~------------------------------ 102 (302)
T 3e4c_A 58 SRTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYS-----VDVKK------------------------------ 102 (302)
T ss_dssp TCCCEEEEEECCSCSSSCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE------------------------------
T ss_pred CCccEEEEEECcCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEee------------------------------
Confidence 3578999999987631 1233 46899999999999996 22322
Q ss_pred CCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCC-----CCCCHHHHHHHHHHHH-Hc
Q 013308 134 YTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTS-----RYIYADELIDVLKKKH-AS 207 (445)
Q Consensus 134 Y~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~-----~~L~a~dL~~~L~~M~-~~ 207 (445)
++|.+.+...|.--.. + .+-...|-+++||.+||..|.|.=-|. +.+.-++|.+.|..-+ ..
T Consensus 103 ----dlt~~em~~~l~~f~~-------~-~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F~~~~Cps 170 (302)
T 3e4c_A 103 ----NLTASDMTTELEAFAH-------R-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPS 170 (302)
T ss_dssp ----SCCHHHHHHHHHHHHT-------C-GGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHTSTTTCGG
T ss_pred ----CCCHHHHHHHHHHHHh-------h-hccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHHhhhcchh
Confidence 4688888888873110 1 111235668888999999986533232 2355555544443210 00
Q ss_pred CCCceEEEEeeccccccccccc--------------------------CCCCCcEEEEeecCCCCccccccCCCCCCCCC
Q 013308 208 GNYKSLVFYLEACESGSIFEGL--------------------------LPEGLNIYATTASNAEESSWGTYCPGEIPGPP 261 (445)
Q Consensus 208 ~~Ykkmvf~iEAC~SGSmf~~l--------------------------lp~~~nV~a~TASn~~ESSya~yc~~~~~~~~ 261 (445)
-.=|=-+|+|+||...-+-..+ +|...++++.=|+-++.-||-.
T Consensus 171 L~gKPKlffIQACRG~~~~~~~~~ds~~~~~~~~~~~~~~~~~d~~~~ip~~aDfLi~yST~pG~vS~R~---------- 240 (302)
T 3e4c_A 171 LKDKPKVIIIQAARGDSPGVVWFKDSVGVSGNLSLPTTEEFEDDAIKKAHIEKDFIAFCSSTPDNVSWRH---------- 240 (302)
T ss_dssp GTTSCEEEEEEEECSSSCCCCCCCCC--------CCCCCCCCCHHHHTSCSSCSEEEEEECCCCCCCSSS----------
T ss_pred hcCCccEEEEECCCCCCCCcceeccCcccccccccccccccccccccccCCCCCEEEEEeCCCCceeecC----------
Confidence 0234458999999865432111 1222244444444444444422
Q ss_pred CCccccchhhhhhhhcccccccccccccHHHHHHHHHhhccC
Q 013308 262 PEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (445)
Q Consensus 262 ~~~~tcLgD~fS~~wme~~~~~~l~~eTl~~qf~~Vk~~t~~ 303 (445)
+--|-+|.-...+-...+ -..+.|.++|..|..++..
T Consensus 241 ----~~~GSwFIqaL~~~l~~~-~~~~dl~~il~~V~~~v~~ 277 (302)
T 3e4c_A 241 ----PTMGSVFIGRLIEHMQEY-ACSCDVEEIFRKVRFSFEQ 277 (302)
T ss_dssp ----TTCCCHHHHHHHHHHHHH-TTTSCHHHHHHHHHHHTSS
T ss_pred ----CCCCcHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHhC
Confidence 222344444433332211 1346799999999988764
No 14
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=93.86 E-value=0.37 Score=44.21 Aligned_cols=117 Identities=18% Similarity=0.247 Sum_probs=75.1
Q ss_pred CCeeEEEEeccCCCC-Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccccC
Q 013308 58 GTRWAVLLAGSNGFW-NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDY 134 (445)
Q Consensus 58 ~~~wAVlVagS~gw~-NYRHq--aDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~iDY 134 (445)
+...|+||+=+++-. .-|.- .|+-.+-++|++.||. +.+ +.
T Consensus 42 ~~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~---V~~--~~------------------------------- 85 (178)
T 2h54_A 42 RTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYS---VDV--KK------------------------------- 85 (178)
T ss_dssp CCCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCE---EEE--EE-------------------------------
T ss_pred cCCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCE---EEE--ec-------------------------------
Confidence 468999999887521 23433 6899999999999995 222 22
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCC-----CCCCHHHHHHHHHHHHHcC-
Q 013308 135 TGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTS-----RYIYADELIDVLKKKHASG- 208 (445)
Q Consensus 135 ~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~-----~~L~a~dL~~~L~~M~~~~- 208 (445)
++|.+.+...|+-= . .+ .+-...|-+++||.+||..|.|.-.|. +.+.-++|...|. ..+
T Consensus 86 ---dlt~~em~~~l~~f-~------~~-~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f~---~~~C 151 (178)
T 2h54_A 86 ---NLTASDMTTELEAF-A------HR-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLN---TKNC 151 (178)
T ss_dssp ---SCCHHHHHHHHHHH-H------TC-GGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHHS---TTTC
T ss_pred ---CCCHHHHHHHHHHH-H------hh-hhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHHh---hcCC
Confidence 46788888888721 0 01 111245678888899999987655554 1355555544443 221
Q ss_pred ---CCceEEEEeecccccc
Q 013308 209 ---NYKSLVFYLEACESGS 224 (445)
Q Consensus 209 ---~Ykkmvf~iEAC~SGS 224 (445)
.=|--+|+|+||..+-
T Consensus 152 psL~gKPKlffiqACRg~~ 170 (178)
T 2h54_A 152 PSLKDKPKVIIIQACRGDS 170 (178)
T ss_dssp GGGTTSCEEEEEESCSSSB
T ss_pred hhhcCCceEEEEECCCCCC
Confidence 1345688999999854
No 15
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=93.68 E-value=0.81 Score=44.24 Aligned_cols=119 Identities=14% Similarity=0.187 Sum_probs=72.1
Q ss_pred CCeeEEEEeccCCCC----Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 013308 58 GTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (445)
Q Consensus 58 ~~~wAVlVagS~gw~----NYRHq--aDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (445)
....|+||+=.++-. .-|.- .|+-.+-++|++.||. |.++.
T Consensus 20 ~rg~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~---------------------------- 66 (277)
T 1nw9_B 20 PCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFM-----VEVKG---------------------------- 66 (277)
T ss_dssp SCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEE-----EEEEE----------------------------
T ss_pred cccEEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEc----------------------------
Confidence 568999998877643 33544 5789999999999985 22222
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCC-------CCcCCCCCCCCCHHHHHHHHHHH
Q 013308 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP-------GVLGMPTSRYIYADELIDVLKKK 204 (445)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~-------g~l~fpd~~~L~a~dL~~~L~~M 204 (445)
++|.+.+..+|.-- . .+ .. ...|-++++|.+||.. |.+.--|+..+.-++|.+.|..-
T Consensus 67 ------dlt~~em~~~l~~~-~------~~-~h-~~~D~~vv~ilSHG~~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~~ 131 (277)
T 1nw9_B 67 ------DLTAKKMVLALLEL-A------RQ-DH-GALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGT 131 (277)
T ss_dssp ------SCCHHHHHHHHHHH-H------HS-CC-TTCSEEEEEEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTTCTT
T ss_pred ------CCCHHHHHHHHHHH-H------Hh-hc-ccCCeEEEEEeCCCCccccccCCCcEEecCCceeeHHHHHHHhccc
Confidence 46778888888721 1 11 11 2357788888899987 65544344345555554444310
Q ss_pred H-HcCCCceEEEEeecccccc
Q 013308 205 H-ASGNYKSLVFYLEACESGS 224 (445)
Q Consensus 205 ~-~~~~Ykkmvf~iEAC~SGS 224 (445)
. ..-.=|=-+|+|+||...-
T Consensus 132 ~CpsL~gKPKlffiQACRG~~ 152 (277)
T 1nw9_B 132 SCPSLGGKPKLFFIQACGGEQ 152 (277)
T ss_dssp TCGGGTTSCEEEEEEEEC---
T ss_pred CChhHcCCCcEEEEeccCCCc
Confidence 0 0012234589999997543
No 16
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=93.24 E-value=0.5 Score=46.90 Aligned_cols=120 Identities=12% Similarity=0.125 Sum_probs=74.9
Q ss_pred CCeeEEEEeccCCCC--Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcccc
Q 013308 58 GTRWAVLLAGSNGFW--NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKD 133 (445)
Q Consensus 58 ~~~wAVlVagS~gw~--NYRHq--aDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~iD 133 (445)
....|+||+=.++-. .-|.. .|+-.+-++|++.||. |.++.
T Consensus 60 ~rg~aLIInN~~F~~~~~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~------------------------------ 104 (316)
T 2fp3_A 60 NRGVLLMVNIMDYPDQNRRRIGAEKDSKSLIHLFQELNFT-----IFPYG------------------------------ 104 (316)
T ss_dssp CSEEEEEEECCCCSSTTSCCTTHHHHHHHHHHHHHHTTEE-----EEEEC------------------------------
T ss_pred CCcEEEEEeCcccCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEcc------------------------------
Confidence 578999998776541 34544 6789999999999994 22222
Q ss_pred CCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCC----CCcCCCCCCCCCHHHHHHHHHHHH-HcC
Q 013308 134 YTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----GVLGMPTSRYIYADELIDVLKKKH-ASG 208 (445)
Q Consensus 134 Y~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~----g~l~fpd~~~L~a~dL~~~L~~M~-~~~ 208 (445)
++|.+.+..+|.-= . .+ ..++..|-+++||.+||.. |+|.--|+..+.-++|.+.|..-. ..-
T Consensus 105 ----dlt~~em~~~l~~f-~------~~-~h~~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f~~~~CpsL 172 (316)
T 2fp3_A 105 ----NVNQDQFFKLLTMV-T------SS-SYVQNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHFQTAKCPYL 172 (316)
T ss_dssp ----SCCHHHHHHHHHHH-H------TS-HHHHTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTTSTTTCGGG
T ss_pred ----CCCHHHHHHHHHHH-H------HH-hhcCCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHhccccChhh
Confidence 56788888888721 1 11 1121466788899999998 877766765466555554443210 000
Q ss_pred CCceEEEEeecccccc
Q 013308 209 NYKSLVFYLEACESGS 224 (445)
Q Consensus 209 ~Ykkmvf~iEAC~SGS 224 (445)
.=|=-+|+|+||...-
T Consensus 173 ~gKPKlffiQACRG~~ 188 (316)
T 2fp3_A 173 VNKPKVLMFPFARGDE 188 (316)
T ss_dssp TTSCEEEEESCC----
T ss_pred cCCceEEEEecCCCCc
Confidence 2244588999997643
No 17
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=84.56 E-value=4.6 Score=36.54 Aligned_cols=122 Identities=16% Similarity=0.204 Sum_probs=81.0
Q ss_pred CCCeeEEEEeccCCCC----Cchhhh--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCc
Q 013308 57 VGTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (445)
Q Consensus 57 ~~~~wAVlVagS~gw~----NYRHqa--Dv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv 130 (445)
.....|+||.=.++-. ..|.-+ |+-.+.+++++.||. |..+.
T Consensus 31 ~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~--------------------------- 78 (167)
T 1pyo_A 31 RPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYD-----VHVLC--------------------------- 78 (167)
T ss_dssp SSSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEE-----EEEEE---------------------------
T ss_pred CCceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCE-----EEEee---------------------------
Confidence 3588999998776542 346554 899999999999994 22222
Q ss_pred cccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcCC
Q 013308 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (445)
Q Consensus 131 ~iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~ 209 (445)
++|.+.+...|+-- . .+ -+-...|-+++++.+||..|.|.-.|+..+.-++|...|..-+ ..-.
T Consensus 79 -------dlt~~em~~~l~~~-~------~~-~dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~l~~i~~~F~~~~CpsL~ 143 (167)
T 1pyo_A 79 -------DQTAQEMQEKLQNF-A------QL-PAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQ 143 (167)
T ss_dssp -------SCCHHHHHHHHHHH-H------TC-GGGGTSSEEEEEEESCEETTEEECTTSCEEEHHHHHHHTSTTTCGGGT
T ss_pred -------CCCHHHHHHHHHHh-h------hh-hhccCCCEEEEEeCCCCCCCeEEEeCCCEEcHHHHHHHhcccCChhHc
Confidence 46788888888721 1 10 0112467899999999999988877775566666666554210 0012
Q ss_pred CceEEEEeeccccccc
Q 013308 210 YKSLVFYLEACESGSI 225 (445)
Q Consensus 210 Ykkmvf~iEAC~SGSm 225 (445)
=|=-+|+|.||...-+
T Consensus 144 gKPKlffiQACRG~~~ 159 (167)
T 1pyo_A 144 NKPKMFFIQACRGDET 159 (167)
T ss_dssp TSCEEEEEESCSSSBC
T ss_pred CCCeEEEEECCCCCCC
Confidence 2445899999987544
No 18
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=79.17 E-value=2.5 Score=37.40 Aligned_cols=119 Identities=14% Similarity=0.207 Sum_probs=77.5
Q ss_pred CCeeEEEEeccCCCC----Cchhhh--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 013308 58 GTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (445)
Q Consensus 58 ~~~wAVlVagS~gw~----NYRHqa--Dv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (445)
....|+||.=.++-. .-|.-+ |+-.+.+++++.||. |..+.
T Consensus 15 ~rG~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~---------------------------- 61 (146)
T 2dko_A 15 EMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKN---------------------------- 61 (146)
T ss_dssp EEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE----------------------------
T ss_pred CceEEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEee----------------------------
Confidence 467999998776542 345555 889999999999996 22222
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcCCC
Q 013308 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (445)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Y 210 (445)
++|.+.+...|+-- . .+ +-...|-+++++.+||..|.|.-.|+ .+.-++|...+..-. ..-.=
T Consensus 62 ------dlt~~em~~~l~~~-~------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~-~~~l~~i~~~F~~~~CpsL~g 125 (146)
T 2dko_A 62 ------DLTREEIVELMRDV-S------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTG 125 (146)
T ss_dssp ------SCCHHHHHHHHHHH-H------HS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTT
T ss_pred ------CCCHHHHHHHHHHH-H------Hh--hcCCCCeEEEEeccCCCCCEEEEeCC-cEeHHHHHHHhccccChhhcC
Confidence 45778888888721 1 11 11346789999999999998877776 355555554442100 00122
Q ss_pred ceEEEEeeccccccc
Q 013308 211 KSLVFYLEACESGSI 225 (445)
Q Consensus 211 kkmvf~iEAC~SGSm 225 (445)
|=-+|+|.||...-+
T Consensus 126 KPKlffiQACRG~~~ 140 (146)
T 2dko_A 126 KPKLFIIQACRGTEL 140 (146)
T ss_dssp SCEEEEEESCCSSBC
T ss_pred CCeEEEEECCCCCCC
Confidence 455889999987543
No 19
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=65.01 E-value=5.7 Score=38.56 Aligned_cols=110 Identities=6% Similarity=0.020 Sum_probs=71.1
Q ss_pred CCeeEEEEeccCCCCCchhhhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccccCCCC
Q 013308 58 GTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGE 137 (445)
Q Consensus 58 ~~~wAVlVagS~gw~NYRHqaDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~iDY~g~ 137 (445)
....||||+=.. .|+-.+-+++++.||. |..++
T Consensus 42 ~rG~~LIinn~~--------~D~~~L~~~f~~LgF~-----V~~~~---------------------------------- 74 (272)
T 3h11_A 42 PLGICLIIDCIG--------NETELLRDTFTSLGYE-----VQKFL---------------------------------- 74 (272)
T ss_dssp SSEEEEEEESSC--------CCCSHHHHHHHHHTEE-----EEEEE----------------------------------
T ss_pred cceEEEEECCch--------HHHHHHHHHHHHCCCE-----EEEee----------------------------------
Confidence 567899998532 4777888888888884 33222
Q ss_pred CCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCC--CCCHHHHHHHHHHHH-HcCCCceEE
Q 013308 138 DVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSR--YIYADELIDVLKKKH-ASGNYKSLV 214 (445)
Q Consensus 138 ~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~--~L~a~dL~~~L~~M~-~~~~Ykkmv 214 (445)
++|.+.+...|.--.. + .+-...|-+++++.+||..|.|.=-|+. .+.-++|.+.|..-+ ..-.=|=-+
T Consensus 75 dlt~~em~~~l~~~~~-------~-~dh~~~d~~v~~ilSHG~~g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPKl 146 (272)
T 3h11_A 75 HLSMHGISQILGQFAC-------M-PEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKM 146 (272)
T ss_dssp SCBHHHHHHHHHHHHT-------C-GGGGGCSEEEEEEEEEEETTEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCEE
T ss_pred CCCHHHHHHHHHHHHh-------c-cccCCCCEEEEEEEcCCCCCeEEEEcCCcceEeHHHHHHHhccccChhhcCCCcE
Confidence 4688888888873110 0 1124578899999999999977655654 355666655553210 001234468
Q ss_pred EEeecccc
Q 013308 215 FYLEACES 222 (445)
Q Consensus 215 f~iEAC~S 222 (445)
|+|.||..
T Consensus 147 ffiQACRG 154 (272)
T 3h11_A 147 FFIQNYVV 154 (272)
T ss_dssp EEEEEEEC
T ss_pred EEEECCCC
Confidence 99999985
No 20
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=58.96 E-value=4 Score=36.79 Aligned_cols=120 Identities=18% Similarity=0.183 Sum_probs=79.0
Q ss_pred CCeeEEEEeccCCCC-----------Cchh--hhHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCC
Q 013308 58 GTRWAVLLAGSNGFW-----------NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGD 124 (445)
Q Consensus 58 ~~~wAVlVagS~gw~-----------NYRH--qaDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~ 124 (445)
...+|+||.=.++-. .-|. ..|+-.+-+++++.||. |..++
T Consensus 22 ~rG~~LIinn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~--------------------- 75 (164)
T 1qtn_A 22 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFE-----IKPHD--------------------- 75 (164)
T ss_dssp SCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE---------------------
T ss_pred CceEEEEEechhcCCccccccccccCcCCCCcHHHHHHHHHHHHHCCCE-----EEEec---------------------
Confidence 467999998765532 2333 47789999999999984 22223
Q ss_pred CccCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHH
Q 013308 125 DVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKK 204 (445)
Q Consensus 125 dvY~gv~iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M 204 (445)
++|.+.+..+|+-- . .+ +-...|-+++++.+||..|.|.-.|+..+.-++|...|..-
T Consensus 76 -------------dlt~~em~~~l~~~-~------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~i~~i~~~F~~~ 133 (164)
T 1qtn_A 76 -------------DCTVEQIYEILKIY-Q------LM--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGL 133 (164)
T ss_dssp -------------SCCHHHHHHHHHHH-H------HS--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTT
T ss_pred -------------CCCHHHHHHHHHHH-H------Hh--hccCCCEEEEEeCCCCCCCEEEeeCCCEeeHHHHHHHhccc
Confidence 45788888888721 1 11 11346788999999999998887777556667776655331
Q ss_pred HH-cCCCceEEEEeeccccccc
Q 013308 205 HA-SGNYKSLVFYLEACESGSI 225 (445)
Q Consensus 205 ~~-~~~Ykkmvf~iEAC~SGSm 225 (445)
.- .-.=|=-+|+|.||...-.
T Consensus 134 ~CpsL~gKPKlFfiQACRG~~~ 155 (164)
T 1qtn_A 134 KCPSLAGKPKVFFIQACQGDNY 155 (164)
T ss_dssp TCGGGTTSCEEEEEESCSSSBC
T ss_pred cChhhcCCCeEEEEECCCCCCc
Confidence 00 0122445889999987543
No 21
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=49.77 E-value=7.9 Score=35.58 Aligned_cols=121 Identities=18% Similarity=0.230 Sum_probs=77.8
Q ss_pred CCCeeEEEEeccCCCC----Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCc
Q 013308 57 VGTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (445)
Q Consensus 57 ~~~~wAVlVagS~gw~----NYRHq--aDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv 130 (445)
.....|+||.=.++.. ..|.- .|+-.+-+++++.||. |..+.
T Consensus 42 ~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LGF~-----V~~~~--------------------------- 89 (179)
T 3p45_A 42 RRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFE-----VKCFN--------------------------- 89 (179)
T ss_dssp SBCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE---------------------------
T ss_pred CccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEEe---------------------------
Confidence 3567999999887653 24443 5788999999999995 22222
Q ss_pred cccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcCC
Q 013308 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (445)
Q Consensus 131 ~iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~ 209 (445)
++|.+.+...|.- .. .+ +-...|-+++++..||..|.|.--|+. +.-++|.+.|..-. ..-.
T Consensus 90 -------dlt~~em~~~l~~-~~------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-v~l~~I~~~F~~~~CpsL~ 152 (179)
T 3p45_A 90 -------DLKAEELLLKIHE-VS------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLV 152 (179)
T ss_dssp -------SCCHHHHHHHHHH-HH------TS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHGGGSGGGCGGGT
T ss_pred -------CCCHHHHHHHHHH-Hh------hh--hcCCCCEEEEEEeccCCCCEEEEECCE-EEHHHHHHhcccccChhhC
Confidence 4688888888873 11 11 123568899999999999988777776 66666655553211 0112
Q ss_pred CceEEEEeecccccccc
Q 013308 210 YKSLVFYLEACESGSIF 226 (445)
Q Consensus 210 Ykkmvf~iEAC~SGSmf 226 (445)
=|=-+|+|.||...-.=
T Consensus 153 gKPKlFfIQACRG~~~d 169 (179)
T 3p45_A 153 GKPKIFIIQACRGNQHD 169 (179)
T ss_dssp TSCEEEEEECC------
T ss_pred CCCcEEEEECCCCCCCC
Confidence 24568899999985543
No 22
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=36.58 E-value=9.1 Score=34.90 Aligned_cols=118 Identities=14% Similarity=0.205 Sum_probs=75.4
Q ss_pred CCeeEEEEeccCCCC----Cchhh--hHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 013308 58 GTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (445)
Q Consensus 58 ~~~wAVlVagS~gw~----NYRHq--aDv~~~YqiL~~~Gi~denIIvmmyDDiA~n~~Np~pG~i~n~p~g~dvY~gv~ 131 (445)
....|+||.=.++-. .-|.- .|+-.+.+++++.||. |..+.
T Consensus 43 ~rG~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LgF~-----V~v~~---------------------------- 89 (173)
T 2ql9_A 43 KLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFD-----VIVYN---------------------------- 89 (173)
T ss_dssp EEEEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHHTEE-----EEEEE----------------------------
T ss_pred CceEEEEEeccccCCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEe----------------------------
Confidence 466899998776543 23544 6789999999999984 22222
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCCcccCCCCCeEEEEeecCCCCCCcCCCCCCCCCHHHHHHHHHHHH-HcCCC
Q 013308 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (445)
Q Consensus 132 iDY~g~~Vt~~nfl~vL~G~~~~~~~~s~kvl~S~~~D~VFIY~tdHGg~g~l~fpd~~~L~a~dL~~~L~~M~-~~~~Y 210 (445)
++|.+.+..+|.- .. .+ +-...|-+++++..||..|.|.-.|+. +.-++|...+..-. ..-.=
T Consensus 90 ------dlt~~em~~~l~~-~s------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-~~i~~I~~~F~~~~CpsL~g 153 (173)
T 2ql9_A 90 ------DCSCAKMQDLLKK-AS------EE--DHTNAACFACILLSHGEENVIYGKDGV-TPIKDLTAHFRGDRCKTLLE 153 (173)
T ss_dssp ------SCCHHHHHHHHHH-HH------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHGGGSTTTCGGGTT
T ss_pred ------CCCHHHHHHHHHH-HH------Hh--hccCCCeEEEeecCCCCCCEEEEcCCc-EEHHHHHHHcCcccChhHcC
Confidence 4578888888873 11 11 113467789999999999987776764 55555444332100 00023
Q ss_pred ceEEEEeecccccc
Q 013308 211 KSLVFYLEACESGS 224 (445)
Q Consensus 211 kkmvf~iEAC~SGS 224 (445)
|=-+|+|.||...-
T Consensus 154 KPKlFfIQACRG~~ 167 (173)
T 2ql9_A 154 KPKLFFIQACRGTE 167 (173)
T ss_dssp SCEEEEEESCCSSB
T ss_pred CCeEEEEECCCCCC
Confidence 45588899998754
No 23
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=24.36 E-value=35 Score=34.35 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=19.7
Q ss_pred cCCCCCchhhhHHHH-HHHHHHhCCC
Q 013308 68 SNGFWNYRHQADICH-AYQLLRKGGL 92 (445)
Q Consensus 68 S~gw~NYRHqaDv~~-~YqiL~~~Gi 92 (445)
.+-|.|++|.+||++ +|.+|++.++
T Consensus 96 ~npYHN~~HA~dV~q~~~~ll~~~~l 121 (359)
T 2r8q_A 96 RVPYHNFYHVVDVCQTLHTYLYTGKA 121 (359)
T ss_dssp SCSSSSHHHHHHHHHHHHHHHHTSCG
T ss_pred CCccccHHHHHHHHHHHHHHHHcccc
Confidence 478999999999996 5667776654
No 24
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...
Probab=23.80 E-value=43 Score=33.49 Aligned_cols=25 Identities=20% Similarity=0.541 Sum_probs=19.7
Q ss_pred cCCCCCchhhhHHHH-HHHHHHhCCC
Q 013308 68 SNGFWNYRHQADICH-AYQLLRKGGL 92 (445)
Q Consensus 68 S~gw~NYRHqaDv~~-~YqiL~~~Gi 92 (445)
.+-|.|++|.+||++ +|.+|+..|+
T Consensus 97 ~npYHN~~HA~dV~q~~~~ll~~~~l 122 (347)
T 1tbf_A 97 NVAYHNWRHAFNTAQCMFAALKAGKI 122 (347)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCcCHHHHHHHHHHHHHHHHcccc
Confidence 478999999999985 5667776654
No 25
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=22.45 E-value=33 Score=34.59 Aligned_cols=25 Identities=28% Similarity=0.445 Sum_probs=20.3
Q ss_pred cCCCCCchhhhHHHH-HHHHHHhCCC
Q 013308 68 SNGFWNYRHQADICH-AYQLLRKGGL 92 (445)
Q Consensus 68 S~gw~NYRHqaDv~~-~YqiL~~~Gi 92 (445)
.+-|.|++|.+||++ +|.+|.+.|+
T Consensus 78 ~npYHN~~HA~dV~q~~~~ll~~~~l 103 (365)
T 1taz_A 78 KNPYHNQIHAADVTQTVHCFLLRTGM 103 (365)
T ss_dssp CCSSSSHHHHHHHHHHHHHHHHHHSG
T ss_pred CCCCcCHHHHHHHHHHHHHHHHhhhH
Confidence 367999999999996 5677887775
No 26
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=21.27 E-value=72 Score=30.59 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=24.4
Q ss_pred EEEeccCCCC-------------------CchhhhHHHHHHHHHHhC-CCCCCCEEE
Q 013308 63 VLLAGSNGFW-------------------NYRHQADICHAYQLLRKG-GLKDENIIV 99 (445)
Q Consensus 63 VlVagS~gw~-------------------NYRHqaDv~~~YqiL~~~-Gi~denIIv 99 (445)
+||+|..|.. ..+-.|+ .+-++|.+. |+|++.|++
T Consensus 65 lIvSGG~g~~t~~~~~~v~~~~~y~~l~~~~~sEA~--~m~~~l~~~~GVp~~~Ill 119 (266)
T 3ca8_A 65 LLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEAT--ILADIAHQFWHIPHEKIWI 119 (266)
T ss_dssp EEEECCSSTTHHHHHHHHHTCTTGGGSCCTTSCHHH--HHHHHHHHTTCCCGGGEEE
T ss_pred EEEECCCCCcccchhhhhccccccccccCCCCCHHH--HHHHHHHHhcCCCHHHEEe
Confidence 6788877752 2333444 455678887 999999976
Done!