Query 013309
Match_columns 445
No_of_seqs 289 out of 1851
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 08:10:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013309hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 4.8E-66 1.6E-70 526.4 33.6 337 46-400 19-414 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 1E-60 3.4E-65 485.5 44.9 339 52-428 18-363 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 3.4E-61 1.2E-65 483.9 39.5 338 47-414 8-375 (376)
4 1czf_A Polygalacturonase II; b 100.0 1.7E-58 5.7E-63 459.9 34.0 322 52-412 27-357 (362)
5 2uvf_A Exopolygalacturonase; G 100.0 7.2E-58 2.5E-62 484.2 39.3 377 49-439 151-608 (608)
6 2iq7_A Endopolygalacturonase; 100.0 4.4E-57 1.5E-61 447.2 34.6 318 69-412 6-332 (339)
7 1nhc_A Polygalacturonase I; be 100.0 4.7E-57 1.6E-61 446.4 34.2 319 68-413 5-332 (336)
8 1hg8_A Endopolygalacturonase; 100.0 4.7E-56 1.6E-60 440.8 37.1 319 70-413 7-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 3.4E-56 1.2E-60 440.5 35.9 315 70-412 11-334 (339)
10 1k5c_A Endopolygalacturonase; 100.0 4.6E-56 1.6E-60 437.9 26.2 311 71-414 8-330 (335)
11 2x6w_A Tail spike protein; vir 100.0 6E-49 2.1E-53 402.7 19.0 297 51-400 48-385 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 3.2E-42 1.1E-46 358.5 18.0 303 58-399 146-521 (549)
13 1h80_A IOTA-carrageenase; hydr 100.0 6E-40 2E-44 333.8 25.1 272 46-367 13-301 (464)
14 3gq8_A Preneck appendage prote 100.0 2.6E-39 8.8E-44 333.3 28.1 300 52-401 20-373 (609)
15 3gqn_A Preneck appendage prote 100.0 1.2E-38 4.1E-43 332.8 30.3 300 52-401 20-373 (772)
16 1ogo_X Dextranase; hydrolase, 100.0 3.5E-39 1.2E-43 335.2 25.8 269 85-399 229-546 (574)
17 2pyg_A Poly(beta-D-mannuronate 100.0 3.7E-30 1.3E-34 258.9 27.5 240 54-332 2-293 (377)
18 2vbk_A Tailspike-protein; vira 100.0 8E-32 2.7E-36 262.5 14.2 213 52-304 49-286 (514)
19 3jur_A EXO-poly-alpha-D-galact 99.9 1.2E-23 4.2E-28 214.1 26.9 228 137-399 191-444 (448)
20 3eqn_A Glucan 1,3-beta-glucosi 99.9 3.4E-23 1.2E-27 216.7 25.2 265 50-368 45-327 (758)
21 2uvf_A Exopolygalacturonase; G 99.9 2.8E-22 9.6E-27 212.1 29.4 247 136-422 331-607 (608)
22 1ia5_A Polygalacturonase; glyc 99.9 3.6E-19 1.2E-23 175.5 31.9 225 181-431 66-337 (339)
23 1czf_A Polygalacturonase II; b 99.9 3.1E-19 1.1E-23 177.2 29.1 224 181-431 89-360 (362)
24 2iq7_A Endopolygalacturonase; 99.9 1.1E-18 3.7E-23 172.3 31.4 224 181-430 62-334 (339)
25 1nhc_A Polygalacturonase I; be 99.8 8.3E-19 2.8E-23 172.9 30.3 224 181-431 62-334 (336)
26 1bhe_A PEHA, polygalacturonase 99.8 1.5E-18 5.3E-23 173.7 31.5 221 110-371 108-364 (376)
27 1rmg_A Rgase A, rhamnogalactur 99.8 6.6E-18 2.2E-22 171.2 35.4 169 204-400 129-311 (422)
28 1hg8_A Endopolygalacturonase; 99.8 1.6E-17 5.6E-22 164.3 27.5 221 110-372 68-335 (349)
29 1k5c_A Endopolygalacturonase; 99.8 1E-17 3.5E-22 164.7 23.3 188 181-397 60-286 (335)
30 1ogo_X Dextranase; hydrolase, 99.8 6.5E-17 2.2E-21 168.2 23.9 236 87-371 264-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.7 1.9E-16 6.5E-21 164.7 22.7 250 87-371 222-521 (549)
32 2inu_A Insulin fructotransfera 99.6 5.2E-14 1.8E-18 138.2 18.0 229 48-310 8-282 (410)
33 1h80_A IOTA-carrageenase; hydr 99.5 8.1E-13 2.8E-17 134.4 19.0 159 185-380 106-279 (464)
34 3gq8_A Preneck appendage prote 99.5 1.2E-10 4E-15 120.5 33.3 221 136-399 134-400 (609)
35 3gqn_A Preneck appendage prote 99.4 1.9E-10 6.5E-15 120.9 32.1 220 136-398 134-399 (772)
36 2pyg_A Poly(beta-D-mannuronate 99.4 4.4E-11 1.5E-15 119.6 24.4 110 181-305 174-295 (377)
37 2x6w_A Tail spike protein; vir 99.3 5.9E-11 2E-15 122.2 17.4 231 110-395 149-408 (600)
38 3eqn_A Glucan 1,3-beta-glucosi 99.2 9.1E-11 3.1E-15 123.3 14.8 93 50-152 396-495 (758)
39 1ru4_A Pectate lyase, PEL9A; p 99.2 2.6E-09 9.1E-14 107.0 22.3 250 49-339 11-299 (400)
40 1dbg_A Chondroitinase B; beta 99.2 1.5E-09 5E-14 111.5 20.5 207 70-311 30-272 (506)
41 1pcl_A Pectate lyase E; lyase 98.7 7.2E-07 2.5E-11 87.6 20.3 111 182-304 98-228 (355)
42 3vmv_A Pectate lyase; polysacc 98.6 1.9E-06 6.3E-11 83.5 18.8 117 227-366 118-249 (326)
43 3zsc_A Pectate trisaccharide-l 98.6 4.7E-06 1.6E-10 81.0 21.5 73 228-303 115-194 (340)
44 1pxz_A Major pollen allergen J 98.5 1.2E-06 3.9E-11 86.0 14.6 142 187-338 87-255 (346)
45 1idk_A Pectin lyase A; signal, 98.5 1.1E-06 3.9E-11 86.3 14.3 69 227-303 151-233 (359)
46 1pxz_A Major pollen allergen J 98.5 3.2E-06 1.1E-10 82.8 16.6 130 182-333 108-272 (346)
47 3zsc_A Pectate trisaccharide-l 98.4 8.3E-06 2.8E-10 79.3 17.3 154 145-334 62-251 (340)
48 1air_A Pectate lyase C, PELC; 98.3 3.7E-06 1.3E-10 82.5 13.0 155 188-367 89-261 (353)
49 2qy1_A Pectate lyase II; GAG l 98.3 7.5E-06 2.6E-10 79.8 14.8 164 182-367 66-250 (330)
50 2qy1_A Pectate lyase II; GAG l 98.3 2.5E-05 8.5E-10 76.1 17.5 140 181-337 87-254 (330)
51 1pe9_A Pectate lyase A; parall 98.3 9.4E-06 3.2E-10 79.7 14.3 73 228-303 142-238 (361)
52 3uw0_A Pectinesterase; right-h 98.3 1.6E-05 5.6E-10 78.1 15.2 78 185-270 119-217 (364)
53 1gq8_A Pectinesterase; hydrola 98.2 3.4E-05 1.2E-09 74.6 17.0 134 182-332 89-243 (319)
54 2inu_A Insulin fructotransfera 98.2 1E-05 3.5E-10 79.6 13.3 131 188-339 136-282 (410)
55 1xg2_A Pectinesterase 1; prote 98.2 5.3E-05 1.8E-09 73.2 18.0 134 182-332 85-239 (317)
56 1qcx_A Pectin lyase B; beta-he 98.2 7.4E-06 2.5E-10 80.6 12.2 67 228-303 152-233 (359)
57 1qcx_A Pectin lyase B; beta-he 98.2 7.7E-05 2.6E-09 73.3 18.2 135 182-337 126-284 (359)
58 1vbl_A Pectate lyase 47; PL 47 98.2 7.5E-06 2.6E-10 81.9 11.0 100 204-303 149-282 (416)
59 1air_A Pectate lyase C, PELC; 98.1 2.8E-05 9.7E-10 76.2 14.1 140 181-337 104-265 (353)
60 2x3h_A K5 lyase, K5A lyase; ba 98.1 0.0019 6.4E-08 60.3 24.0 180 52-270 62-258 (542)
61 1idk_A Pectin lyase A; signal, 98.1 4.8E-05 1.6E-09 74.7 14.2 158 145-336 102-283 (359)
62 2o04_A Pectate lyase, PL; hexa 98.1 1.4E-05 4.8E-10 79.5 10.5 100 203-303 143-276 (399)
63 2nsp_A Pectinesterase A; micha 97.9 0.00043 1.5E-08 67.6 17.4 76 186-270 94-190 (342)
64 1vbl_A Pectate lyase 47; PL 47 97.6 0.00059 2E-08 68.2 13.9 134 181-331 149-332 (416)
65 1pcl_A Pectate lyase E; lyase 97.6 0.00099 3.4E-08 65.3 15.1 93 201-303 132-249 (355)
66 1ru4_A Pectate lyase, PEL9A; p 97.5 0.00054 1.8E-08 68.4 10.8 140 181-338 109-275 (400)
67 2o04_A Pectate lyase, PL; hexa 97.4 0.00052 1.8E-08 68.2 10.1 112 181-303 144-298 (399)
68 3vmv_A Pectate lyase; polysacc 97.1 0.0072 2.5E-07 58.3 13.4 94 231-332 96-204 (326)
69 3t9g_A Pectate lyase; PL3, par 96.9 0.055 1.9E-06 47.2 15.8 128 212-368 53-183 (196)
70 1pe9_A Pectate lyase A; parall 96.8 0.0031 1.1E-07 61.8 8.4 112 181-302 104-259 (361)
71 3t9g_A Pectate lyase; PL3, par 96.7 0.077 2.6E-06 46.3 15.7 132 188-334 52-183 (196)
72 2vbk_A Tailspike-protein; vira 96.7 0.0031 1E-07 62.3 7.6 76 182-275 198-287 (514)
73 3grh_A YBHC, acyl-COA thioeste 96.6 0.062 2.1E-06 53.3 16.5 47 70-119 88-136 (422)
74 1ee6_A Pectate lyase; parallel 96.6 0.059 2E-06 47.2 14.5 28 228-257 61-89 (197)
75 1dbg_A Chondroitinase B; beta 95.7 0.056 1.9E-06 55.3 11.3 140 186-333 226-392 (506)
76 1gq8_A Pectinesterase; hydrola 95.5 0.29 9.9E-06 47.0 14.7 111 209-333 92-210 (319)
77 1xg2_A Pectinesterase 1; prote 95.1 0.27 9.1E-06 47.2 13.0 113 205-332 85-205 (317)
78 1ee6_A Pectate lyase; parallel 95.1 0.3 1E-05 42.8 11.9 131 188-333 48-178 (197)
79 3b4n_A Endo-pectate lyase; pec 94.8 1.2 4E-05 42.3 16.0 49 213-269 160-210 (344)
80 2nsp_A Pectinesterase A; micha 92.7 0.95 3.3E-05 43.8 11.9 112 209-332 94-230 (342)
81 3uw0_A Pectinesterase; right-h 91.4 2.4 8.3E-05 41.3 13.0 113 209-332 120-255 (364)
82 3b4n_A Endo-pectate lyase; pec 90.5 1.5 5.1E-05 41.7 10.1 142 147-302 125-275 (344)
83 3ju4_A Endo-N-acetylneuraminid 87.3 0.2 6.8E-06 49.0 1.7 40 60-103 4-43 (670)
84 3grh_A YBHC, acyl-COA thioeste 82.1 40 0.0014 33.2 15.5 137 183-332 196-362 (422)
85 3riq_A Tailspike protein; righ 70.0 37 0.0013 33.1 11.0 79 238-331 263-363 (543)
86 2vfm_A Bifunctional tail prote 58.7 34 0.0012 32.7 8.2 67 260-328 269-352 (559)
87 2v5i_A Salmonella typhimurium 56.3 32 0.0011 32.9 7.6 67 260-328 272-355 (559)
88 2x3h_A K5 lyase, K5A lyase; ba 51.8 1.6E+02 0.0053 27.6 13.7 41 289-334 140-180 (542)
89 2xc1_A Bifunctional tail prote 46.6 55 0.0019 32.6 7.8 67 260-328 376-459 (666)
90 3riq_A Tailspike protein; righ 43.5 29 0.001 33.8 5.3 68 260-329 262-344 (543)
91 2vfm_A Bifunctional tail prote 43.4 1.4E+02 0.0048 28.5 9.7 80 238-332 270-373 (559)
92 2v5i_A Salmonella typhimurium 41.3 1.4E+02 0.0047 28.6 9.4 80 238-332 273-376 (559)
93 2xc1_A Bifunctional tail prote 34.7 2E+02 0.007 28.6 9.7 80 238-332 377-480 (666)
94 2yuh_A Tubulin-specific chaper 32.5 27 0.00094 30.1 3.0 11 182-192 71-81 (179)
95 3bh7_B Protein XRP2; protein-p 32.0 2.2E+02 0.0074 27.2 9.5 11 182-192 64-74 (352)
96 3bh7_B Protein XRP2; protein-p 26.3 98 0.0033 29.7 6.0 7 239-245 136-142 (352)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=4.8e-66 Score=526.39 Aligned_cols=337 Identities=25% Similarity=0.420 Sum_probs=299.6
Q ss_pred CCCCCCCeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeecCCCCCCeeEeEeeEEECCC
Q 013309 46 GTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLEISGTIVAPK 125 (445)
Q Consensus 46 ~~~~~~~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l~l~~~~~s~v~l~~~G~i~~~~ 125 (445)
.++..+++++||++|||+|||.+|||+|||+||+ +|++.++++|+||+| +|++++|.| +++++|+++|+|++++
T Consensus 19 ~~p~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~-~c~~~ggg~v~vP~G-~yl~~~l~l----~s~v~l~l~gtL~~s~ 92 (448)
T 3jur_A 19 REPQIPDREVNLLDFGARGDGRTDCSESFKRAIE-ELSKQGGGRLIVPEG-VFLTGPIHL----KSNIELHVKGTIKFIP 92 (448)
T ss_dssp CCCCCCSCEEEGGGGTCCCEEEEECHHHHHHHHH-HHHHHTCEEEEECSS-EEEESCEEC----CTTEEEEESSEEEECC
T ss_pred cCCCCCCcEEEEEecccCCCCCeecHHHHHHHHH-hhhhcCCeEEEECCC-cEEEeeeEe----CCCcEEEEEEEEEecC
Confidence 4566778899999999999999999999999999 565556799999999 999999999 8999999999999999
Q ss_pred CcCCcCCC-----------CccccEEEeceeeEEEEeceEEecCC--chhhccccccCC---------------------
Q 013309 126 DPDVWKGL-----------NRRRWLYFNRVNHLTVQGGGTINGMG--QEWWSRSCKINT--------------------- 171 (445)
Q Consensus 126 ~~~~~~~~-----------~~~~~i~~~~~~nv~I~G~G~IDG~G--~~~w~~~~~~~~--------------------- 171 (445)
++++|... ...+||++.+++|++|+|.|+|||+| +.||........
T Consensus 93 d~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 172 (448)
T 3jur_A 93 DPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAE 172 (448)
T ss_dssp CGGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHH
T ss_pred CHHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhc
Confidence 99888311 13478999999999999999999999 889974321000
Q ss_pred ----------CCCCCCCCeEEEEEeecceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEE
Q 013309 172 ----------TNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVE 241 (445)
Q Consensus 172 ----------~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~ 241 (445)
...+..||++|.|.+|+|++|+|++++|+|.|++++..|++++|+|++|.++ ++|+||||+.+|+||+
T Consensus 173 ~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~ 250 (448)
T 3jur_A 173 RGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYML 250 (448)
T ss_dssp HTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEE
T ss_pred ccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEE
Confidence 0123579999999999999999999999999999999999999999999986 6899999999999999
Q ss_pred EEeeEEecCCccEEEeCC-----------ceeEEEEeeEE--cCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCcceE
Q 013309 242 VKNSIVGTGDDCISIVGN-----------SSLIRIRNFAC--GPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGV 307 (445)
Q Consensus 242 I~n~~i~~gdD~i~i~~~-----------~~ni~I~n~~~--~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi 307 (445)
|+||+|.++||||+++++ ++||+|+||+| ..+| |++|||+ ..+.++||+|+||+|.++.+|+
T Consensus 251 I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~----~~~~v~nV~v~n~~~~~t~~Gi 326 (448)
T 3jur_A 251 IEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE----MSGGVRNVVARNNVYMNVERAL 326 (448)
T ss_dssp EESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSS----CTTCEEEEEEESCEEESCSEEE
T ss_pred EEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCc----ccCcEEEEEEEEEEEecccceE
Confidence 999999999999999987 89999999999 6677 8999994 5679999999999999999999
Q ss_pred EEEEecCCCceeeeEEEEeEEEecCCccE-EEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccCcceEEEEecCCCCe
Q 013309 308 RIKTWQGGSGSATNIQFLDVLMKNVSNPI-IIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSATEEAIKFACSDDSPC 386 (445)
Q Consensus 308 ~i~~~~g~~g~v~ni~~~ni~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~~~~~~i~~~~~~~~ 386 (445)
+||++.+++|.|+||+|+||+|+++.+|+ .|++.|+... ....+.|+||+|+||+++. ...++.|.|.++.||
T Consensus 327 rIKt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~-----~~~~~~i~nI~~~NI~~t~-~~~~i~i~g~~~~p~ 400 (448)
T 3jur_A 327 RLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEE-----GEYLPVVRSVFVKNLKATG-GKYAVRIEGLENDYV 400 (448)
T ss_dssp EEECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGCC-----CSCCCEEEEEEEESCEEEE-CSEEEEEECBTTBCE
T ss_pred EEEEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCCC-----CCCCceEEEEEEEeEEEEe-cceEEEEEeCCCCCE
Confidence 99999988899999999999999999988 9999997641 1234689999999999998 445999999999999
Q ss_pred eCeEEEeEEEEecC
Q 013309 387 EGLFLEDVQLVSHS 400 (445)
Q Consensus 387 ~~i~~~nv~i~~~~ 400 (445)
++|+|+||+++..+
T Consensus 401 ~~I~~~nv~i~~~~ 414 (448)
T 3jur_A 401 KDILISDTIIEGAK 414 (448)
T ss_dssp EEEEEEEEEEESCS
T ss_pred eeEEEEEEEEEccc
Confidence 99999999998654
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=1e-60 Score=485.48 Aligned_cols=339 Identities=22% Similarity=0.425 Sum_probs=297.3
Q ss_pred CeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeee-eeecCCCCCCeeEeEeeEEECCCCcCCc
Q 013309 52 KRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHP-IDISGPCKSRLTLEISGTIVAPKDPDVW 130 (445)
Q Consensus 52 ~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~-l~l~~~~~s~v~l~~~G~i~~~~~~~~~ 130 (445)
.++++|++|||++||++|||+|||+||+ +|+. +++|+||+| +|++++ |.|++ .++++|+++|+++...+..
T Consensus 18 ~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~~--g~~V~vP~G-~Yli~~~l~l~g--~s~v~l~l~G~~l~~~~~~-- 89 (422)
T 1rmg_A 18 TKTCNILSYGAVADNSTDVGPAITSAWA-ACKS--GGLVYIPSG-NYALNTWVTLTG--GSATAIQLDGIIYRTGTAS-- 89 (422)
T ss_dssp HCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHTB--TCEEEECSS-EEEECSCEEEES--CEEEEEEECSEEEECCCCS--
T ss_pred CcEEEeeeccccCCCCcccHHHHHHHHH-HCCC--CCEEEECCC-eEEeCCceeecC--CCeEEEEEcCcEEcccCCC--
Confidence 5689999999999999999999999999 6763 789999999 999985 99976 5899999999887754321
Q ss_pred CCCCccccEE---EeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCceeEE
Q 013309 131 KGLNRRRWLY---FNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAF 207 (445)
Q Consensus 131 ~~~~~~~~i~---~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~ 207 (445)
..|+. ..++++++|+|.|+|||+|..||... ..||++|.|.+|+|++|+|++++|++.|++++
T Consensus 90 -----~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~---------~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~i 155 (422)
T 1rmg_A 90 -----GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEG---------TYGARILRLTDVTHFSVHDIILVDAPAFHFTM 155 (422)
T ss_dssp -----SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTTT---------CCCCEEEEEEEEEEEEEEEEEEECCSSCSEEE
T ss_pred -----CceEEEEecCceeEEeeccCEEEECCcchhhcCC---------CCCceEEEEcccceEEEECeEEECCCceEEEE
Confidence 23444 45556667789999999999999631 24999999999999999999999999999999
Q ss_pred EceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcCCceEEEeecCCcCCC
Q 013309 208 TNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSS 287 (445)
Q Consensus 208 ~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~~~gi~igs~g~~~~~ 287 (445)
..|+|++|+|++|.+ .+++++||||+.+ +||+|+||+|+++||||+++++++||+|+||+|..+||++|||+|. .
T Consensus 156 ~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~---~ 230 (422)
T 1rmg_A 156 DTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGA---D 230 (422)
T ss_dssp EEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECT---T
T ss_pred eCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCC---C
Confidence 999999999999999 4568999999999 9999999999999999999999999999999999999999999863 3
Q ss_pred ccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEE
Q 013309 288 VRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKVENITFIHIK 367 (445)
Q Consensus 288 ~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~ 367 (445)
+.++||+|+||+|.++.+|++||++.+ .|.++||+|+||+|++++.||.|++.|+... ........|+||+|+||+
T Consensus 231 ~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~---~~~~~~~~i~nI~~~nI~ 306 (422)
T 1rmg_A 231 TDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVLLENFIGHGNAYSLDIDGYWSSMT---AVAGDGVQLNNITVKNWK 306 (422)
T ss_dssp EEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEEEEEEEEEEESCSEEEETBCTTSC---CBSSSCCEEEEEEEEEEE
T ss_pred CcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEEEEeEEEECccccEEEEeeccCCC---cccCCCceEEEEEEEeEE
Confidence 589999999999999999999999754 5899999999999999999999999997632 223456899999999999
Q ss_pred EEccC---cceEEEEecCCCCeeCeEEEeEEEEecCCCccceeeeeeeecccceecCCCccCCC
Q 013309 368 GTSAT---EEAIKFACSDDSPCEGLFLEDVQLVSHSGGIAKSFCWEAYGSSVGQVEPPPCFACS 428 (445)
Q Consensus 368 ~~~~~---~~~~~i~~~~~~~~~~i~~~nv~i~~~~~~~~~~~c~n~~~~~~~~~~p~~c~~~~ 428 (445)
++... ..+++|.|.++.+|+||+|+||+|+...++.+.+.|+|+.|.. +|+...
T Consensus 307 gt~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~~~~~C~n~~g~g-------~C~~~~ 363 (422)
T 1rmg_A 307 GTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLCRSAYGSG-------YCLKDS 363 (422)
T ss_dssp EEESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSSCEEEEEESEEEES-------TTCBCC
T ss_pred EEecccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCCccceEEECCCccc-------cccCCC
Confidence 99853 3489999999999999999999999988877789999998753 587654
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=3.4e-61 Score=483.86 Aligned_cols=338 Identities=23% Similarity=0.376 Sum_probs=294.5
Q ss_pred CCCCCCeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcC---CcEEEeeeeeecCCCCCCeeEeEee--EE
Q 013309 47 TRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSA---GYTFLIHPIDISGPCKSRLTLEISG--TI 121 (445)
Q Consensus 47 ~~~~~~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~---G~~Yl~~~l~l~~~~~s~v~l~~~G--~i 121 (445)
.|..++ +++|++|| .+|||+|||+||+ ||++ |++|+||+ | +|++++|.| +|+++|++++ +|
T Consensus 8 ~p~~p~-~~~v~~~G-----~~~dT~aiq~Ai~-ac~~--Gg~v~~~~~~~g-~yl~g~i~l----~s~vtL~l~~Ga~L 73 (376)
T 1bhe_A 8 EPKTPS-SCTTLKAD-----SSTATSTIQKALN-NCDQ--GKAVRLSAGSTS-VFLSGPLSL----PSGVSLLIDKGVTL 73 (376)
T ss_dssp CCCCCC-EEEEEECC-----SSBCHHHHHHHHT-TCCT--TCEEEEECSSSS-EEEESCEEC----CTTCEEEECTTCEE
T ss_pred CCCCCC-eEEECCCC-----CCccHHHHHHHHH-Hhcc--CCcEEEECCCCc-eEEEeEEEE----CCCCEEEECCCeEE
Confidence 344444 59999986 4899999999999 7876 46666664 6 999999999 8999999995 99
Q ss_pred ECCCCcCCcCCC------------CccccEEEeceeeEEEEeceEEecCC--------chhhccccccCCCCCCCCCCeE
Q 013309 122 VAPKDPDVWKGL------------NRRRWLYFNRVNHLTVQGGGTINGMG--------QEWWSRSCKINTTNPCRHAPTA 181 (445)
Q Consensus 122 ~~~~~~~~~~~~------------~~~~~i~~~~~~nv~I~G~G~IDG~G--------~~~w~~~~~~~~~~~~~~rp~~ 181 (445)
+++.++.+|+.. ...+||++.+++|++|+|.|+|||+| +.||...........+..||++
T Consensus 74 ~~s~~~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~ 153 (376)
T 1bhe_A 74 RAVNNAKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRL 153 (376)
T ss_dssp EECSCSGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCS
T ss_pred EeCCCHHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeE
Confidence 999998888642 23579999999999999999999999 5799743211001112468999
Q ss_pred EEEEeecceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEEEeC---
Q 013309 182 ITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVG--- 258 (445)
Q Consensus 182 i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~--- 258 (445)
|.|.+|+|++|+|++++|+|.|++++..|++++|+|++|.++.+++|+||||+.+|+||+|+||+|.++||||++++
T Consensus 154 i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~ 233 (376)
T 1bhe_A 154 IQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKG 233 (376)
T ss_dssp EEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTT
T ss_pred EEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCC
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999996
Q ss_pred --CceeEEEEeeEEcCCceEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCCccE
Q 013309 259 --NSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPI 336 (445)
Q Consensus 259 --~~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~~i 336 (445)
+++||+|+||+|..+||++|||+ .. .++||+|+||+|.++.+|++||+++++.|.|+||+|+||+|+++..||
T Consensus 234 ~~~s~nI~I~n~~~~~ghGisiGSe----~~-~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~v~~~i 308 (376)
T 1bhe_A 234 RAETRNISILHNDFGTGHGMSIGSE----TM-GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPI 308 (376)
T ss_dssp SCCEEEEEEEEEEECSSSCEEEEEE----ES-SEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEE
T ss_pred CCCceEEEEEeeEEEccccEEeccC----Cc-cEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeCCCceE
Confidence 79999999999999999999995 33 899999999999999999999999999999999999999999999999
Q ss_pred EEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccCcceEEEEecCCCCeeCeEEEeEEEEecCCCccceeeeeeeec
Q 013309 337 IIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSATEEAIKFACSDDSPCEGLFLEDVQLVSHSGGIAKSFCWEAYGS 414 (445)
Q Consensus 337 ~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~~~~~~i~~~~~~~~~~i~~~nv~i~~~~~~~~~~~c~n~~~~ 414 (445)
.|++.|++.. ....+.|+||+|+||+++... ++.|.|.++.||++|+|+||++... ..+.|+|++..
T Consensus 309 ~i~~~y~~~~-----~~~~~~i~ni~~~ni~gt~~~--~~~l~g~~~~~~~~I~l~nv~l~~~----~~~~~~~~~~~ 375 (376)
T 1bhe_A 309 VIDTVYEKKE-----GSNVPDWSDITFKDVTSETKG--VVVLNGENAKKPIEVTMKNVKLTSD----STWQIKNVNVK 375 (376)
T ss_dssp EEETTSSCCC-----CCCCCEEEEEEEEEEEECSCC--EEEEECTTCSSCEEEEEEEEECCTT----CEEEEESEEEE
T ss_pred EEEeeccCCC-----CCcCcEEEEEEEEEEEEEecc--eEEEEeCCCCCeeeEEEEeEEEecC----CCceEEEEEec
Confidence 9999997642 233468999999999999764 7899999999999999999999865 35899999753
No 4
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.7e-58 Score=459.90 Aligned_cols=322 Identities=24% Similarity=0.433 Sum_probs=280.6
Q ss_pred CeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee-eecCCCCCCeeEeEeeEEECCCCcCCc
Q 013309 52 KRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI-DISGPCKSRLTLEISGTIVAPKDPDVW 130 (445)
Q Consensus 52 ~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~ 130 (445)
..+++|++ ++|||+|++ +|+..++++|+||+| +|+. | .| +++++|+++|++.+. ...|
T Consensus 27 ~~~Ctv~~-----------~~aiq~ai~-~c~~~~g~~v~vP~G-~~l~--l~~l----~~~~~l~~~g~~~~~--~~~w 85 (362)
T 1czf_A 27 RDSCTFTT-----------AAAAKAGKA-KCSTITLNNIEVPAG-TTLD--LTGL----TSGTKVIFEGTTTFQ--YEEW 85 (362)
T ss_dssp -CEEEESS-----------HHHHHHHGG-GCSEEEEESCEECTT-CCEE--ECSC----CTTCEEEEESEEEEC--CCCS
T ss_pred CCEEEECC-----------HHHHHHHHH-HhhccCCCEEEECCC-EEEE--eecc----CCCeEEEEeCcEEec--cccC
Confidence 35788887 689999999 687666789999999 7763 3 45 779999999988763 3667
Q ss_pred CCCCccccEEEeceeeEEEEe--ceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCceeEEE
Q 013309 131 KGLNRRRWLYFNRVNHLTVQG--GGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFT 208 (445)
Q Consensus 131 ~~~~~~~~i~~~~~~nv~I~G--~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~ 208 (445)
++ +|+.+.+ +|++|+| .|+|||+|+.||..... .+..||+++.|.+|+|++|+|++++|+|.|++++.
T Consensus 86 ~g----~~i~~~~-~nv~I~G~~~g~IdG~G~~~w~~~~~-----~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~ 155 (362)
T 1czf_A 86 AG----PLISMSG-EHITVTGASGHLINCDGARWWDGKGT-----SGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ 155 (362)
T ss_dssp CC----CSEEEEE-ESCEEEECTTCEEECCGGGTCCSCTT-----SSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE
T ss_pred CC----cEEEEeC-ccEEEEcCCCcEEECCCchhhcccCC-----CCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe
Confidence 64 7888855 9999999 69999999999985421 13679999999999999999999999999999999
Q ss_pred ceecEEEEeEEEECCC-C---CCCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcCCceEEEeecCCc
Q 013309 209 NCLRVVISNLEVIAPA-E---SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKS 284 (445)
Q Consensus 209 ~~~nv~I~n~~I~~~~-~---~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~~~gi~igs~g~~ 284 (445)
|+|++|+|++|.++. + ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.++|||+|||+|.+
T Consensus 156 -~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~ 233 (362)
T 1czf_A 156 -ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS-GENIWFTGGTCIGGHGLSIGSVGDR 233 (362)
T ss_dssp -CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEECSS
T ss_pred -eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC-CeEEEEEEEEEeCCceeEEeecccc
Confidence 999999999999964 3 789999999999999999999999999999999 4999999999999999999998765
Q ss_pred CCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCcceEEEEEE
Q 013309 285 NSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVS-NPIIIDQYYCDSPVPCANQTSAVKVENITF 363 (445)
Q Consensus 285 ~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f 363 (445)
+.+.++||+|+|++|.++.+|++||+|+++.|.++||+|+||+|+++. +||.|++.|++.. ++..+.+...|+||+|
T Consensus 234 -~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~-~~~~p~~~~~i~nI~~ 311 (362)
T 1czf_A 234 -SNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQDYEDGK-PTGKPTNGVTIQDVKL 311 (362)
T ss_dssp -SCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTE-ECSCCCSSEEEEEEEE
T ss_pred -CCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECcccccEEEEEecCCCC-CCCCCCCCceEEEEEE
Confidence 668999999999999999999999999999999999999999999997 7999999998742 3333345689999999
Q ss_pred EeEEEEccC-cceEEEEecCCCCeeCeEEEeEEEEecCCCccceeeeeee
Q 013309 364 IHIKGTSAT-EEAIKFACSDDSPCEGLFLEDVQLVSHSGGIAKSFCWEAY 412 (445)
Q Consensus 364 ~ni~~~~~~-~~~~~i~~~~~~~~~~i~~~nv~i~~~~~~~~~~~c~n~~ 412 (445)
+||+++... ..++++.|+ +.+|+||+|+||+++.. .+...|.|+.
T Consensus 312 ~ni~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~~---~~~~~C~n~~ 357 (362)
T 1czf_A 312 ESVTGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTGG---KKSTACKNFP 357 (362)
T ss_dssp EEEEEEECTTSEEEEEECC-TTTEEEEEEEEEEEESS---BCCSCCBSCC
T ss_pred EEEEEEecCCceEEEEEeC-CCcCcCEEEEeEEEEcC---CCcccCcCCC
Confidence 999999876 558999998 78999999999999853 2456788886
No 5
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=7.2e-58 Score=484.24 Aligned_cols=377 Identities=21% Similarity=0.269 Sum_probs=300.8
Q ss_pred CCCCeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeecCCCCCCeeEeEe--eEEECCCC
Q 013309 49 SKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLEIS--GTIVAPKD 126 (445)
Q Consensus 49 ~~~~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l~l~~~~~s~v~l~~~--G~i~~~~~ 126 (445)
.+++.++||++|||+|||.+|||+|||+||+ +|+. +++|+||+| +|++++|.| +|+++|+++ ++|+++.+
T Consensus 151 ~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--g~~v~vP~G-~y~~g~i~l----ks~v~L~l~~gatL~~s~d 222 (608)
T 2uvf_A 151 SAKPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--GCRVEIPAG-TYKSGALWL----KSDMTLNLQAGAILLGSEN 222 (608)
T ss_dssp CCCCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--TEEEEECSE-EEEECCEEC----CSSEEEEECTTEEEEECSC
T ss_pred ccCCCEEecccccccCCCCccCHHHHHHHHH-hcCC--CCEEEECCC-ceEecceec----cCceEEEecCCcEEEecCC
Confidence 3456789999999999999999999999999 6776 689999999 999999999 899999995 79999998
Q ss_pred cCCcCCC----------CccccEEEec--------eeeEEEEeceEEecCCchhhccccccC----------CCCC----
Q 013309 127 PDVWKGL----------NRRRWLYFNR--------VNHLTVQGGGTINGMGQEWWSRSCKIN----------TTNP---- 174 (445)
Q Consensus 127 ~~~~~~~----------~~~~~i~~~~--------~~nv~I~G~G~IDG~G~~~w~~~~~~~----------~~~~---- 174 (445)
+.+|+.. ...++|+..+ ++|++|+|.|+|||+|..||......+ +...
T Consensus 223 ~~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~~ 302 (608)
T 2uvf_A 223 PDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKVH 302 (608)
T ss_dssp GGGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTHH
T ss_pred HHHCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCccccccccccccccccccccccccccccccc
Confidence 8887621 0125788877 799999999999999988874210000 0000
Q ss_pred ------------------------CCCCCeEEEEEeecceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCCCCCCC
Q 013309 175 ------------------------CRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTD 230 (445)
Q Consensus 175 ------------------------~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~~n~D 230 (445)
+..||++|.|.+|+|++|+|++++|++.|++++..|++++|+|++|.. .+++|+|
T Consensus 303 ~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtD 381 (608)
T 2uvf_A 303 EDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGD 381 (608)
T ss_dssp HHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCC
T ss_pred ccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCC
Confidence 124899999999999999999999999999999999999999999865 4578999
Q ss_pred ceeeeceecEEEEeeEEecCCccEEEeCC----------ceeEEEEeeEEcCCce-EEEeecCCcCCCccEEeEEEEcEE
Q 013309 231 GIHISASRGVEVKNSIVGTGDDCISIVGN----------SSLIRIRNFACGPGHG-ISIGSLGKSNSSVRIHDIMVYGAL 299 (445)
Q Consensus 231 Gi~~~~s~nv~I~n~~i~~gdD~i~i~~~----------~~ni~I~n~~~~~~~g-i~igs~g~~~~~~~v~nv~i~n~~ 299 (445)
|||+.+|+||+|+||+|.++||||+++++ ++||+|+||+|.++|| +.||| +..+.++||+|+||+
T Consensus 382 Gidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS----~~~~~v~nI~v~n~~ 457 (608)
T 2uvf_A 382 GIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGS----HTGAWIEDILAENNV 457 (608)
T ss_dssp SEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEES----CCTTCEEEEEEESCE
T ss_pred eEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcc----cCCCCEEEEEEEeEE
Confidence 99999999999999999999999999975 7999999999999998 46899 577899999999999
Q ss_pred EeCCcceEEEEEecCCCceeeeEEEEeEEEecC-CccEEEEeeeCCCCCC-C-CCCCCcceEEEEEEEeEEEEccCc--c
Q 013309 300 ISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNV-SNPIIIDQYYCDSPVP-C-ANQTSAVKVENITFIHIKGTSATE--E 374 (445)
Q Consensus 300 ~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~-~~~i~i~~~~~~~~~~-~-~~~~~~~~i~ni~f~ni~~~~~~~--~ 374 (445)
|.++.+|++||++++++|.|+||+|+||+|+++ .+||.|++.|++.... . .+....+.++||+|+||+...... .
T Consensus 458 ~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~ 537 (608)
T 2uvf_A 458 MYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNP 537 (608)
T ss_dssp EESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSC
T ss_pred EECCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEE
Confidence 999999999999999889999999999999999 5999999999864321 0 011122457777777777665432 3
Q ss_pred eEEEEe--cCCCCeeCeEEEeEEEEecCCCc----cceeeeeeeecccceecCCCccCCCCCc-ccccCCCc
Q 013309 375 AIKFAC--SDDSPCEGLFLEDVQLVSHSGGI----AKSFCWEAYGSSVGQVEPPPCFACSEGL-IQQKAPSN 439 (445)
Q Consensus 375 ~~~i~~--~~~~~~~~i~~~nv~i~~~~~~~----~~~~c~n~~~~~~~~~~p~~c~~~~~~~-~~~~~~~~ 439 (445)
++.+.+ .+..+|+||+|+||+++...+.. ..+.|.|+.-.......++.|.+.. |+ .+.+.|+|
T Consensus 538 ~i~i~g~~~~~~p~~ni~~~nv~i~~~~~~~i~~~~~~~~~nv~i~~~~~~~~~~~~~v~-~~~~~~v~~~p 608 (608)
T 2uvf_A 538 SIEIKGDTANKAWHRLVHVNNVQLNNVTPTAISDLRDSEFNKVTFTELRGDTPWHFSEVK-NVKVDGKPVAP 608 (608)
T ss_dssp SEEEECBGGGTBCEEEEEEEEEEEESCCCCEEESEESCEEEEEEEESCSSSCSCCEESCB-SCCBTTCCC--
T ss_pred eEEEEEEcCCCCccccEEEEeEEEEccCceeEEeccCceEEeEEEeCCCCCccEEEEeee-ceEEcceEeCC
Confidence 566665 45568999999999998766321 2345555544332212346777766 54 34666654
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=4.4e-57 Score=447.17 Aligned_cols=318 Identities=25% Similarity=0.450 Sum_probs=278.3
Q ss_pred ccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee-eecCCCCCCeeEeEeeEEECCCCcCCcCCCCccccEEEeceeeE
Q 013309 69 DDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI-DISGPCKSRLTLEISGTIVAPKDPDVWKGLNRRRWLYFNRVNHL 147 (445)
Q Consensus 69 DdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~~~i~~~~~~nv 147 (445)
.||+|||+||+ ||++.++++|+||+| +|+. | .| +++++|+++|++.+. ...|++ +|+.+.+ +|+
T Consensus 6 ~dt~aiq~ai~-~c~~~~g~~v~vP~G-~~~~--l~~l----~~~~~l~~~g~~~~~--~~~w~g----~~i~~~~-~nv 70 (339)
T 2iq7_A 6 TDAAAAIKGKA-SCTSIILNGIVVPAG-TTLD--MTGL----KSGTTVTFQGKTTFG--YKEWEG----PLISFSG-TNI 70 (339)
T ss_dssp SCHHHHHHHGG-GCSEEEEESCEECTT-CCEE--ECSC----CTTCEEEEESEEEEC--CCCSCC----CSEEEEE-ESC
T ss_pred CCHHHHHHHHH-HhhccCCCeEEECCC-EEEE--eecc----CCCeEEEEeCcEEcc--cccccC----cEEEEEc-ccE
Confidence 47999999999 677766789999999 7763 4 45 789999999988763 356653 6888866 999
Q ss_pred EEEec--eEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCC
Q 013309 148 TVQGG--GTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAE 225 (445)
Q Consensus 148 ~I~G~--G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~ 225 (445)
+|+|. |+|||+|+.||..... ..+..||++|.|.+|+|++|++++++|+|.|++++..|++++|++++|.++.+
T Consensus 71 ~I~G~~gG~IdG~G~~~w~~~~~----~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~ 146 (339)
T 2iq7_A 71 NINGASGHSIDCQGSRWWDSKGS----NGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAG 146 (339)
T ss_dssp EEEECTTCEEECCGGGTCCSCGG----GSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGG
T ss_pred EEEcCCCCEEECCcccccccccc----cCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCcc
Confidence 99997 7999999999985432 12367999999999999999999999999999999999999999999999743
Q ss_pred ----CCCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcCCceEEEeecCCcCCCccEEeEEEEcEEEe
Q 013309 226 ----SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALIS 301 (445)
Q Consensus 226 ----~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~nv~i~n~~~~ 301 (445)
++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||+|.+ ..+.++||+|+|++|.
T Consensus 147 d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~ 224 (339)
T 2iq7_A 147 DSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIV 224 (339)
T ss_dssp GGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEE
T ss_pred ccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEE
Confidence 789999999999999999999999999999999 5999999999999999999998765 6689999999999999
Q ss_pred CCcceEEEEEecCCCceeeeEEEEeEEEecCCc-cEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccC-cceEEEE
Q 013309 302 NTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSN-PIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSAT-EEAIKFA 379 (445)
Q Consensus 302 ~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~-~~~~~i~ 379 (445)
++.+|++||+++++.|.++||+|+||+|+++.. ||.|++.|++.. ++..+.+...|+||+|+||+++... ..++.|.
T Consensus 225 ~~~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~ 303 (339)
T 2iq7_A 225 NSDNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENGS-PTGTPTNGVPITGLTLSKITGSVASSGTNVYIL 303 (339)
T ss_dssp SCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTSEEEEEE
T ss_pred CCCcEEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEE
Confidence 999999999999989999999999999999986 999999998742 2333345679999999999999886 5589999
Q ss_pred ecCCCCeeCeEEEeEEEEecCCCccceeeeeee
Q 013309 380 CSDDSPCEGLFLEDVQLVSHSGGIAKSFCWEAY 412 (445)
Q Consensus 380 ~~~~~~~~~i~~~nv~i~~~~~~~~~~~c~n~~ 412 (445)
|. ..+|+||+|+||+++.. .+...|+|+.
T Consensus 304 c~-~~~c~ni~~~nv~i~~~---~~~~~C~n~~ 332 (339)
T 2iq7_A 304 CA-SGACSNWKWSGVSVTGG---KKSTKCSNIP 332 (339)
T ss_dssp CC-TTCEEEEEEEEEEEESS---BCCSCCBCCC
T ss_pred eC-CCcEecEEEEeEEEEcC---CCcccccCCC
Confidence 95 88999999999999853 2456799886
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=4.7e-57 Score=446.40 Aligned_cols=319 Identities=24% Similarity=0.442 Sum_probs=277.8
Q ss_pred CccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee-eecCCCCCCeeEeEeeEEECCCCcCCcCCCCccccEEEeceee
Q 013309 68 NDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI-DISGPCKSRLTLEISGTIVAPKDPDVWKGLNRRRWLYFNRVNH 146 (445)
Q Consensus 68 tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~~~i~~~~~~n 146 (445)
..||+|||+|++ ||++.++++|+||+| +|+. | .| +++++|+++|++.+. ...|++ +|+.+.+ +|
T Consensus 5 ~~~t~aiq~ai~-~c~~~gg~~v~vP~G-~~~~--l~~l----~~~~~l~~~g~~~~~--~~~w~g----~li~~~~-~n 69 (336)
T 1nhc_A 5 FTSASEASESIS-SCSDVVLSSIEVPAG-ETLD--LSDA----ADGSTITFEGTTSFG--YKEWKG----PLIRFGG-KD 69 (336)
T ss_dssp ESSHHHHHHHGG-GCSEEEEESCEECTT-CCEE--CTTC----CTTCEEEEESEEEEC--CCCSCC----CSEECCE-ES
T ss_pred ECCHHHHHHHHH-HhhccCCCeEEECCC-EEEE--eecc----CCCeEEEEeceEEcc--cccccC----cEEEEec-CC
Confidence 357999999999 687766789999999 7762 4 45 789999999988763 356653 6787765 99
Q ss_pred EEEEec--eEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCceeEEEceecEEEEeEEEECCC
Q 013309 147 LTVQGG--GTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPA 224 (445)
Q Consensus 147 v~I~G~--G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~ 224 (445)
++|+|. |+|||+|+.||..... ..+..||++|.|.+|+|++|++++++|+|.|++++. |++++|+|++|.++.
T Consensus 70 v~I~G~~gG~IdG~G~~~w~~~~~----~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~ 144 (336)
T 1nhc_A 70 LTVTMADGAVIDGDGSRWWDSKGT----NGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSD 144 (336)
T ss_dssp CEEEECTTCEEECCGGGTCCSCTT----TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTT
T ss_pred EEEEcCCCeEEECCccccccccCc----CCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCC
Confidence 999997 7999999999985431 124679999999999999999999999999999999 999999999999975
Q ss_pred C----CCCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcCCceEEEeecCCcCCCccEEeEEEEcEEE
Q 013309 225 E----SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALI 300 (445)
Q Consensus 225 ~----~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~nv~i~n~~~ 300 (445)
+ ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.++|||+|||+|.+ ..+.++||+|+|++|
T Consensus 145 ~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~ 222 (336)
T 1nhc_A 145 GDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINS-GESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTV 222 (336)
T ss_dssp HHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESS-EEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEE
T ss_pred cccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC-CeEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEE
Confidence 3 799999999999999999999999999999999 5999999999999999999998765 568999999999999
Q ss_pred eCCcceEEEEEecCCCceeeeEEEEeEEEecCCc-cEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccC-cceEEE
Q 013309 301 SNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSN-PIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSAT-EEAIKF 378 (445)
Q Consensus 301 ~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~-~~~~~i 378 (445)
.++.+|++||+++++.|.++||+|+||+|+++.. ||.|++.|++.. ++..+.+.+.|+||+|+||+++... ..++.+
T Consensus 223 ~~t~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i 301 (336)
T 1nhc_A 223 SNSANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENGS-PTGTPSTGIPITDVTVDGVTGTLEDDATQVYI 301 (336)
T ss_dssp ESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTCEEEEE
T ss_pred ECCCcEEEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEE
Confidence 9999999999999989999999999999999986 999999998742 3333345689999999999999886 558999
Q ss_pred EecCCCCeeCeEEEeEEEEecCCCccceeeeeeee
Q 013309 379 ACSDDSPCEGLFLEDVQLVSHSGGIAKSFCWEAYG 413 (445)
Q Consensus 379 ~~~~~~~~~~i~~~nv~i~~~~~~~~~~~c~n~~~ 413 (445)
.|. ..+|+||+|+||+++.. .....|+|+..
T Consensus 302 ~c~-~~~c~ni~~~nv~i~~~---~~~~~C~n~~~ 332 (336)
T 1nhc_A 302 LCG-DGSCSDWTWSGVDLSGG---KTSDKCENVPS 332 (336)
T ss_dssp ECC-TTCEEEEEEEEEEEESS---BCCSCCBSCCT
T ss_pred EcC-CCcEecEEEEeEEEEcC---CCCcccCCCCC
Confidence 995 88999999999999853 24567888863
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=4.7e-56 Score=440.83 Aligned_cols=319 Identities=26% Similarity=0.444 Sum_probs=276.6
Q ss_pred cHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee-eecCCCCCCeeEeEeeEEECCCCcCCcCCCCccccEEEeceeeEE
Q 013309 70 DTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI-DISGPCKSRLTLEISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLT 148 (445)
Q Consensus 70 dT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~~~i~~~~~~nv~ 148 (445)
||+|||+|++ ||+..++++|+||+| +|+. | .| +++++|+++|++++.. ..|. ..+|+.+.+ +|++
T Consensus 7 ~t~aiq~ai~-~c~~~gg~~v~vP~G-~~l~--l~~l----~~~~~l~~~g~~~~~~--~~w~---~g~~i~~~~-~ni~ 72 (349)
T 1hg8_A 7 EYSGLATAVS-SCKNIVLNGFQVPTG-KQLD--LSSL----QNDSTVTFKGTTTFAT--TADN---DFNPIVISG-SNIT 72 (349)
T ss_dssp SGGGHHHHHH-HCSEEEECCCEECTT-CCEE--ETTC----CTTCEEEECSEEEECC--CCCT---TCCSEEEEE-ESCE
T ss_pred CHHHHHHHHH-hccccCCCEEEECCC-EEEE--eecc----CCCeEEEEcCceeccc--cccc---CCceEEEEC-ccEE
Confidence 7899999999 677766789999999 7764 3 45 7899999999887632 5672 137888865 9999
Q ss_pred EEe--ceEEecCCchhhccccccCCCCCCC-CCCeEEEE-E-eecceEEeceEEEcCCCceeEEEceecEEEEeEEEECC
Q 013309 149 VQG--GGTINGMGQEWWSRSCKINTTNPCR-HAPTAITF-H-KCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAP 223 (445)
Q Consensus 149 I~G--~G~IDG~G~~~w~~~~~~~~~~~~~-~rp~~i~~-~-~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~ 223 (445)
|+| .|+|||+|+.||..... ..+. .||++|.| . .|+|++|++++++|+|.|++++..|++++|+|++|.++
T Consensus 73 I~G~~~G~IdG~G~~ww~~~~~----~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~ 148 (349)
T 1hg8_A 73 ITGASGHVIDGNGQAYWDGKGS----NSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNR 148 (349)
T ss_dssp EEECTTCEEECCGGGTCCSCTT----CTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECG
T ss_pred EEecCCCEEcCCcchhhhcccc----cCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECC
Confidence 999 69999999999985321 1122 69999999 7 89999999999999999999999999999999999985
Q ss_pred C-C-----------CCCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcCCceEEEeecCCcCCCccEE
Q 013309 224 A-E-----------SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIH 291 (445)
Q Consensus 224 ~-~-----------~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~ 291 (445)
. + ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.++|||+|||+|.+ +.+.++
T Consensus 149 ~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~ 226 (349)
T 1hg8_A 149 AGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVD 226 (349)
T ss_dssp GGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SCCEEE
T ss_pred CCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-ccCCEE
Confidence 3 2 589999999999999999999999999999999 5999999999999999999998766 678999
Q ss_pred eEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEc
Q 013309 292 DIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVS-NPIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTS 370 (445)
Q Consensus 292 nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~ 370 (445)
||+|+|++|.++.+|++||+++++.|.|+||+|+||+|+++. +||.|++.|++.. ++..+.+.+.|+||+|+||+++.
T Consensus 227 nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~-~~~~p~~~~~i~~I~~~ni~gt~ 305 (349)
T 1hg8_A 227 GVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNGG-PTGKPTNGVKISNIKFIKVTGTV 305 (349)
T ss_dssp EEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSS-BCSCCCSSEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeeccCCC-CCCcccCCceEEEEEEEeEEEEe
Confidence 999999999999999999999998999999999999999997 6999999998742 33334556899999999999998
Q ss_pred cC-cceEEEEecCCCCeeCeEEEeEEEEecCCCccceeeeeeee
Q 013309 371 AT-EEAIKFACSDDSPCEGLFLEDVQLVSHSGGIAKSFCWEAYG 413 (445)
Q Consensus 371 ~~-~~~~~i~~~~~~~~~~i~~~nv~i~~~~~~~~~~~c~n~~~ 413 (445)
.. ..+++|.|+ +.+|+||+|+||++++.+ +...|.|+..
T Consensus 306 ~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~~---~~~~C~n~~~ 345 (349)
T 1hg8_A 306 ASSAQDWFILCG-DGSCSGFTFSGNAITGGG---KTSSCNYPTN 345 (349)
T ss_dssp CTTSEEEEEECC-SSCEEEEEEESCEEECCS---SCCEECSSSS
T ss_pred CCCCEEEEEEeC-CCcCcCEEEEeEEEEcCC---CCeeeeCCCC
Confidence 76 568999998 689999999999998533 4568999864
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=3.4e-56 Score=440.49 Aligned_cols=315 Identities=23% Similarity=0.420 Sum_probs=275.1
Q ss_pred cHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee-eecCCCCCCeeEeEeeEEECCCCcCCcCCCCccccEEEeceeeEE
Q 013309 70 DTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI-DISGPCKSRLTLEISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLT 148 (445)
Q Consensus 70 dT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~~~i~~~~~~nv~ 148 (445)
-++|||+|++ ||++.++++|+||+| +|+. | .| +++++|+++|++.+. ...|++ +|+.+.+ +|++
T Consensus 11 g~~aiq~ai~-~c~~~gg~~v~vP~G-~~l~--l~~l----~~~~~l~~~g~~~~~--~~~w~g----~li~~~~-~nv~ 75 (339)
T 1ia5_A 11 GASSASKSKT-SCSTIVLSNVAVPSG-TTLD--LTKL----NDGTHVIFSGETTFG--YKEWSG----PLISVSG-SDLT 75 (339)
T ss_dssp HHHHHHHHGG-GCSEEEEESCEECTT-CCEE--ECSC----CTTCEEEEESEEEEC--CCCSCC----CSEEEEE-ESCE
T ss_pred chHHHHHHHH-HhhccCCCeEEECCC-EEEE--eecc----CCCeEEEEeCcEEcc--cccccC----cEEEEEc-CcEE
Confidence 3679999999 687766789999999 7763 4 55 789999999988763 356653 7888866 9999
Q ss_pred EEec--eEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCC-
Q 013309 149 VQGG--GTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAE- 225 (445)
Q Consensus 149 I~G~--G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~- 225 (445)
|+|. |+|||+|+.||..... ..+..||++|.|.+|+|++|++++++|+|.|++++..|++++|++++|.++.+
T Consensus 76 I~G~~gG~IdG~G~~~w~~~~~----~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d 151 (339)
T 1ia5_A 76 ITGASGHSINGDGSRWWDGEGG----NGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGD 151 (339)
T ss_dssp EEECTTCEEECCGGGTCSSCTT----TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGT
T ss_pred EEcCCCeEEeCCCCcccccccc----CCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccc
Confidence 9997 7999999999985431 12467999999999999999999999999999999999999999999998743
Q ss_pred ---CCCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcCCceEEEeecCCcCCCccEEeEEEEcEEEeC
Q 013309 226 ---SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISN 302 (445)
Q Consensus 226 ---~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~nv~i~n~~~~~ 302 (445)
++|+||||+.+|+||+|+||+|+++||||++++ .+||+|+||+|.++||++|||+|.+ ..+.++||+|+|++|.+
T Consensus 152 ~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~ 229 (339)
T 1ia5_A 152 DNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNS-GENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIIN 229 (339)
T ss_dssp TTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEES
T ss_pred cccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeC-CeEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEEC
Confidence 789999999999999999999999999999999 5999999999999999999998765 56899999999999999
Q ss_pred CcceEEEEEecCCCceeeeEEEEeEEEecCCc-cEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccC-cceEEEEe
Q 013309 303 TQNGVRIKTWQGGSGSATNIQFLDVLMKNVSN-PIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSAT-EEAIKFAC 380 (445)
Q Consensus 303 ~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~-~~~~~i~~ 380 (445)
+.+|++||+++++.|.++||+|+||+|+++.. ||.|++.|.. ++..+.+.+.|+||+|+||+++... ..++.|.|
T Consensus 230 t~~girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~---~~~~p~~~~~i~ni~~~ni~gt~~~~~~~v~i~c 306 (339)
T 1ia5_A 230 SDNGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYGD---TSSTPTTGVPITDFVLDNVHGSVVSSGTNILISC 306 (339)
T ss_dssp CSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEETC---TTSCCCSSSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CCcEEEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCCC---CCCCCcCCceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 99999999999989999999999999999986 9999999932 2233345679999999999999876 45899999
Q ss_pred cCCCCeeCeEEEeEEEEecCCCccceeeeeee
Q 013309 381 SDDSPCEGLFLEDVQLVSHSGGIAKSFCWEAY 412 (445)
Q Consensus 381 ~~~~~~~~i~~~nv~i~~~~~~~~~~~c~n~~ 412 (445)
. ..+|+||+|+||+++.. .....|+|+.
T Consensus 307 ~-~~~c~ni~~~nv~i~~~---~~~~~C~n~~ 334 (339)
T 1ia5_A 307 G-SGSCSDWTWTDVSVSGG---KTSSKCTNVP 334 (339)
T ss_dssp C-TTCEEEEEEEEEEEESS---BCCSCCBSCC
T ss_pred C-CCCEecEEEEeEEEECC---CCCeeeECCC
Confidence 5 88999999999999853 3456788886
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=4.6e-56 Score=437.94 Aligned_cols=311 Identities=20% Similarity=0.326 Sum_probs=269.3
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeecCCCCCCeeEeEeeEEECCCCcCCcCCCCccccEEEeceeeEEEE
Q 013309 71 TEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLEISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQ 150 (445)
Q Consensus 71 T~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~~~i~~~~~~nv~I~ 150 (445)
++|||+ ++ ||++.++++|+||+| +|+ .|.| +++++|+++|++.+. ...|++ +|+.+. .+|++|+
T Consensus 8 ~~aiq~-i~-aC~~~gg~~v~vP~G-~~l--~l~l----~~~~~l~~~g~~~~~--~~~w~~----~~i~~~-~~ni~I~ 71 (335)
T 1k5c_A 8 VDDAKD-IA-GCSAVTLNGFTVPAG-NTL--VLNP----DKGATVTMAGDITFA--KTTLDG----PLFTID-GTGINFV 71 (335)
T ss_dssp TTGGGG-CT-TCSEEEECCEEECTT-CCE--EECC----CTTCEEEECSCEEEC--CCCSCS----CSEEEE-EEEEEEE
T ss_pred HHHhHH-HH-hcccCCCCEEEECCC-EEE--EEEe----CCCeEEEEeccEecc--cccccC----cEEEEE-ccCEEEE
Confidence 679999 88 788777789999999 776 4556 899999999988864 366764 788887 4999999
Q ss_pred e-ceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCceeEEEceec-EEEEeEEEECCCC---
Q 013309 151 G-GGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLR-VVISNLEVIAPAE--- 225 (445)
Q Consensus 151 G-~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~n-v~I~n~~I~~~~~--- 225 (445)
| .|+|||+|+.||+.... ..+..||++|.|..|+ ++|+|++++|+|.|++++..|++ |+|+|++|.++.+
T Consensus 72 G~~G~idG~G~~ww~~~~~----~~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~ 146 (335)
T 1k5c_A 72 GADHIFDGNGALYWDGKGT----NNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTK 146 (335)
T ss_dssp CTTCEEECCGGGTCCSCTT----TSSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGG
T ss_pred eCccEEcCChhHhhhcccc----cCCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCccc
Confidence 9 69999999999985431 2246799999999999 99999999999999999999999 9999999999743
Q ss_pred --CCCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcCCceEEEeecCCcCCCccEEeEEEEcEEEeCC
Q 013309 226 --SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNT 303 (445)
Q Consensus 226 --~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~nv~i~n~~~~~~ 303 (445)
++|+||||+ +|+||+|+||+|+++||||+++++ +||+|+||+|..+|||+|||+|. .+.++||+|+||+|.++
T Consensus 147 ~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t 221 (335)
T 1k5c_A 147 NLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRS 221 (335)
T ss_dssp GCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEE
T ss_pred ccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECC
Confidence 799999999 999999999999999999999995 99999999999999999999752 67999999999999999
Q ss_pred cceEEEEEecCCC-ceeeeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEE--EEccC-cceEEE
Q 013309 304 QNGVRIKTWQGGS-GSATNIQFLDVLMKNVS-NPIIIDQYYCDSPVPCANQTSAVKVENITFIHIK--GTSAT-EEAIKF 378 (445)
Q Consensus 304 ~~gi~i~~~~g~~-g~v~ni~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~--~~~~~-~~~~~i 378 (445)
.+|++||+++++. |.++||+|+||+|+++. +||.|++.|.. ++..+.+...|+||+|+||+ ++... ..++.|
T Consensus 222 ~~girIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~---~~~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i 298 (335)
T 1k5c_A 222 MYGVRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPD---DVGNPGTGAPFSDVNFTGGATTIKVNNAATRVTV 298 (335)
T ss_dssp EEEEEEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETS---SSSSCCSSSCEEEEEECSSCEEEEECTTCEEEEE
T ss_pred CceEEEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCC---CCCCCCCCceEEEEEEEEEEEeeEEcCCceEEEE
Confidence 9999999999988 99999999999999997 69999999942 22333456799999999999 77665 558999
Q ss_pred EecCCCCeeCeEEEeEEEEecCCCccceeeeeeeec
Q 013309 379 ACSDDSPCEGLFLEDVQLVSHSGGIAKSFCWEAYGS 414 (445)
Q Consensus 379 ~~~~~~~~~~i~~~nv~i~~~~~~~~~~~c~n~~~~ 414 (445)
.|++ +|+||+|+||+++..+. ....+.+++..
T Consensus 299 ~c~~--~c~ni~~~nv~i~~~~~--~~~~~~~~~~~ 330 (335)
T 1k5c_A 299 ECGN--CSGNWNWSQLTVTGGKA--GTIKSDKAKIT 330 (335)
T ss_dssp ECSS--EESEEEEEEEEEESSBC--CCEECTTCEEE
T ss_pred ECCC--cCCCEEEEeEEEEcCCC--CceEeEEeEee
Confidence 9976 99999999999987653 34556665543
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=6e-49 Score=402.71 Aligned_cols=297 Identities=14% Similarity=0.063 Sum_probs=250.8
Q ss_pred CCeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEe------------eeeeecCCCCCCeeEeEe
Q 013309 51 SKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLI------------HPIDISGPCKSRLTLEIS 118 (445)
Q Consensus 51 ~~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~------------~~l~l~~~~~s~v~l~~~ 118 (445)
..+++||+||||+|| ||+|||+||+ +|++.++++|+||+|++|++ ++|.| +|+++|+++
T Consensus 48 ~~~~~nV~dfGA~gD----dT~AIqkAId-aCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L----kSnVtL~Ld 118 (600)
T 2x6w_A 48 CDPSGNVIQPGPNVD----SRQYLQAAID-YVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL----RSNVNLNIE 118 (600)
T ss_dssp BCTTSCBCCCCTTCC----CHHHHHHHHH-HHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEEC----CTTEEEEEC
T ss_pred CCcEEeeecCCCCcc----CHHHHHHHHH-HhhhcCCCEEEECCCCEEEecccccccccccccceEE----cCceEEeee
Confidence 356899999999998 9999999999 56666679999999988999 89999 899999999
Q ss_pred eEEECCCCcCCcCCC-----CccccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEe
Q 013309 119 GTIVAPKDPDVWKGL-----NRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQ 193 (445)
Q Consensus 119 G~i~~~~~~~~~~~~-----~~~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~ 193 (445)
|+|+++.++++|+.. ....+|++.+++|++|+|.|+|||+|..||.... .+ ..||+ +.|.+|+ |+
T Consensus 119 GtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~-----~~-~~RP~-l~f~~c~---I~ 188 (600)
T 2x6w_A 119 GRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ-----LR-NGVAF-GRSYNCS---VT 188 (600)
T ss_dssp SEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC-----CE-EEEEC-CSEEEEE---EE
T ss_pred cEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc-----cC-CCCCE-EEEeeeE---Ee
Confidence 999999999988641 1124588899999999999999999999996321 00 24687 8899998 99
Q ss_pred ceEEEcC-CCceeEE---EceecEEEEeEE----EECCCCCCCCCceeeeceecEEEEeeEEecCCccEEE-eCCce-eE
Q 013309 194 NLRVVNS-QQMHIAF---TNCLRVVISNLE----VIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI-VGNSS-LI 263 (445)
Q Consensus 194 ~v~i~ns-~~~~i~~---~~~~nv~I~n~~----I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i-~~~~~-ni 263 (445)
|++++|+ |.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++||||++ |++.. ++
T Consensus 189 GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni 258 (600)
T 2x6w_A 189 GITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNI 258 (600)
T ss_dssp SCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHH
T ss_pred CeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCe
Confidence 9999999 9999999 999999999999 776 6899999 99999999999999999 99864 57
Q ss_pred EEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCCccEEEEeee
Q 013309 264 RIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYY 342 (445)
Q Consensus 264 ~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~~i~i~~~~ 342 (445)
.++ +|..+| ||+||| +..+.++||+|+| +||++.|++|.|+||+|+||+|+++..+|.+++..
T Consensus 259 ~~e--~~~~GHgGISIGS----e~~ggV~NV~V~N----------rIKt~~G~GG~V~NItfeNI~m~nV~~~I~i~q~~ 322 (600)
T 2x6w_A 259 ACS--VQLHQHDTFYRGS----TVNGYCRGAYVVM----------HAAEAAGAGSYAYNMQVENNIAVIYGQFVILGSDV 322 (600)
T ss_dssp EEE--EEECSSSEEEESC----EEEEESEEEEEEE----------CGGGCTTTCSEEEEEEEESCEEEESSEEEEEEECB
T ss_pred EEE--EEcCCCCcEEecc----cccCcEEEEEEEE----------EEEeecCCCceEEEEEEEEEEEEccceEEEeCCCC
Confidence 777 666777 899999 4677899999999 56777778899999999999999999888887651
Q ss_pred CCCCCCCCCCCCcceEEEEEEEeEEEEccCc------ceEEEEecC-------CCCeeCeEEEeEEEEecC
Q 013309 343 CDSPVPCANQTSAVKVENITFIHIKGTSATE------EAIKFACSD-------DSPCEGLFLEDVQLVSHS 400 (445)
Q Consensus 343 ~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~~------~~~~i~~~~-------~~~~~~i~~~nv~i~~~~ 400 (445)
...+.+.|+||+|+||+++.... .+..+.+.+ +.++++++|+|+++....
T Consensus 323 --------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~~ 385 (600)
T 2x6w_A 323 --------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAPA 385 (600)
T ss_dssp --------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECCT
T ss_pred --------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEEEcCC
Confidence 12355799999999999997643 236666655 358999999999996543
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=3.2e-42 Score=358.51 Aligned_cols=303 Identities=12% Similarity=0.167 Sum_probs=239.8
Q ss_pred ecccccCCCCCccHHHHHHHHHHHcCC-------------------------CCCcEEEEcCCcEEEe---eeeeecCCC
Q 013309 58 GDFGAKGDGFNDDTEAFANAWKKACSF-------------------------PARTKIVFSAGYTFLI---HPIDISGPC 109 (445)
Q Consensus 58 ~dfGa~gdg~tDdT~Aiq~Ai~~a~~~-------------------------~gg~~v~~P~G~~Yl~---~~l~l~~~~ 109 (445)
..|||++||.+|.+.+|. +|..++.. .++++|+||+| +|++ ++|.|
T Consensus 146 ~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G-~yl~g~~G~i~l---- 219 (549)
T 1x0c_A 146 DLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPG-VYYFTGHDHMVL---- 219 (549)
T ss_dssp GEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSE-EEECCTTCCEEE----
T ss_pred ccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCe-EEecCCceEEEe----
Confidence 469999999999999887 55444433 35789999999 9997 58999
Q ss_pred CCCee-EeEe-eEEECCCCcCCcCCCCccccEEEe-ceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEE--
Q 013309 110 KSRLT-LEIS-GTIVAPKDPDVWKGLNRRRWLYFN-RVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITF-- 184 (445)
Q Consensus 110 ~s~v~-l~~~-G~i~~~~~~~~~~~~~~~~~i~~~-~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~-- 184 (445)
+|+++ |+++ |+.+.. .+.+. +++|++|+|.|+|||+|..||..... .....+..||+++.|
T Consensus 220 ~s~~~~L~l~~GA~L~g-------------s~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~-~~~~~~~~rp~~i~~~~ 285 (549)
T 1x0c_A 220 SSSVTWVYFAPGAYVKG-------------AVEFLSTASEVKASGHGVLSGEQYVWYADPDE-GYQKASGANNNGLRMWR 285 (549)
T ss_dssp CTTCCEEEECTTEEEES-------------CEEECCCSSEEEEESSCEEECTTSCTTEEGGG-TTEECGGGCSCCCCSEE
T ss_pred cCCCCeEecCCCCEEEE-------------EEEEecCceeEEEEeeEEEECCCceecccCcc-cccccccCCCceEEEee
Confidence 89999 9998 654321 13344 89999999999999999999963211 111122447888888
Q ss_pred ----EeecceEEeceEEEcCCCceeEEE-ce-ec--EEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEEE
Q 013309 185 ----HKCKNLKVQNLRVVNSQQMHIAFT-NC-LR--VVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 256 (445)
Q Consensus 185 ----~~~~nv~I~~v~i~ns~~~~i~~~-~~-~n--v~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i 256 (445)
.+|+|++|+|++++|+|.|++++. .| ++ ++|+|+++.++. .+|+||||+. +||+|+||+|+++||||++
T Consensus 286 ~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaI 362 (549)
T 1x0c_A 286 GTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKM 362 (549)
T ss_dssp EECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEEC
T ss_pred ccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEE
Confidence 999999999999999999999966 56 69 999999998853 3689999999 8999999999999999999
Q ss_pred eCCceeEEEEeeEEcC--Cce-EEEeecCCcCCCccEEeEEEEcEEEeCCcc------eEEEEEe--c--C-------CC
Q 013309 257 VGNSSLIRIRNFACGP--GHG-ISIGSLGKSNSSVRIHDIMVYGALISNTQN------GVRIKTW--Q--G-------GS 316 (445)
Q Consensus 257 ~~~~~ni~I~n~~~~~--~~g-i~igs~g~~~~~~~v~nv~i~n~~~~~~~~------gi~i~~~--~--g-------~~ 316 (445)
++ +||+|+||+|+. +++ |++|| ..+.++||+|+||+|.++.+ |..|++. . + ..
T Consensus 363 ks--~NI~I~n~~~~~~~g~~~IsiGs-----~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~ 435 (549)
T 1x0c_A 363 YY--SNVTARNIVMWKESVAPVVEFGW-----TPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHS 435 (549)
T ss_dssp CS--SSEEEEEEEEEECSSSCSEECCB-----SCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCC
T ss_pred CC--CCEEEEeeEEEcCCCCceEEECC-----CCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCC
Confidence 98 999999999975 456 99998 36789999999999998763 5457761 1 2 26
Q ss_pred ceeeeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccC-----cceEEEEecCC------C
Q 013309 317 GSATNIQFLDVLMKNVS-NPIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSAT-----EEAIKFACSDD------S 384 (445)
Q Consensus 317 g~v~ni~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~-----~~~~~i~~~~~------~ 384 (445)
|.|+||+|+||+|+++. .++.+.+.+. .....++||+|+||++++.. ..+..+.+.++ .
T Consensus 436 G~i~nI~f~NI~i~nv~~~g~~~~~~~g---------~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~ 506 (549)
T 1x0c_A 436 TGNSNMTVRNITWSNFRAEGSSSALFRI---------NPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQI 506 (549)
T ss_dssp CBEEEEEEEEEEEEEEEEEEEECCSEEE---------CCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCBC
T ss_pred ceEccEEEEeEEEEeEEEeceEEeeecC---------CCCCcCccEEEEEEEEEccccccccccceEEeCCCccccccce
Confidence 79999999999999987 5665544321 12347999999999987765 33455655433 6
Q ss_pred CeeCeEEEeEEEEec
Q 013309 385 PCEGLFLEDVQLVSH 399 (445)
Q Consensus 385 ~~~~i~~~nv~i~~~ 399 (445)
+|+||+|+||++.+.
T Consensus 507 ~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 507 TVTDFSIEGFTVGNT 521 (549)
T ss_dssp CEEEEEEEEEEETTE
T ss_pred eeeeEEEEeEEEeCe
Confidence 899999999999654
No 13
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=6e-40 Score=333.84 Aligned_cols=272 Identities=15% Similarity=0.150 Sum_probs=209.8
Q ss_pred CCCCCCCeeEE-eecccccCCCCCccHHHHHHHHHHHcCCC-CCcEEEEcCCcEEEeeeeeecCCCCCCeeEeEe--eEE
Q 013309 46 GTRSKSKRVIF-VGDFGAKGDGFNDDTEAFANAWKKACSFP-ARTKIVFSAGYTFLIHPIDISGPCKSRLTLEIS--GTI 121 (445)
Q Consensus 46 ~~~~~~~~~~~-v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~-gg~~v~~P~G~~Yl~~~l~l~~~~~s~v~l~~~--G~i 121 (445)
.++..+...++ |++|||+|||.+|||+|||+||++ |++. ++++|+||+| +|++++|.| +++++|+++ ++|
T Consensus 13 ~~p~~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aida-c~~~~ggg~V~vP~G-tYl~g~I~l----ks~v~L~l~~GatL 86 (464)
T 1h80_A 13 VAPTQQDVNYDLVDDFGANGNDTSDDSNALQRAINA-ISRKPNGGTLLIPNG-TYHFLGIQM----KSNVHIRVESDVII 86 (464)
T ss_dssp CCCSCCSEEEEHHHHHCCCTTSSSBCHHHHHHHHHH-HHTSTTCEEEEECSS-EEEECSEEC----CTTEEEEECTTCEE
T ss_pred cCCCCCcceeeehhccCcCCCCCchhHHHHHHHHHH-HhhccCCcEEEECCC-eEEEeeEec----cCceEEEEcCCcEE
Confidence 35566778899 999999999999999999999995 5443 6799999999 999999999 899999998 577
Q ss_pred ECCCC--cCCcCCCCccccEEE---eceeeEEEEece---EEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEe
Q 013309 122 VAPKD--PDVWKGLNRRRWLYF---NRVNHLTVQGGG---TINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQ 193 (445)
Q Consensus 122 ~~~~~--~~~~~~~~~~~~i~~---~~~~nv~I~G~G---~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~ 193 (445)
+++.+ ...|+ ++.+ .+++|++|+|.| +|||+|.. ..||++|.|.+|+|++|+
T Consensus 87 ~~s~~td~~~y~------~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~--------------~~rp~~i~~~~~~Nv~I~ 146 (464)
T 1h80_A 87 KPTWNGDGKNHR------LFEVGVNNIVRNFSFQGLGNGFLVDFKDSR--------------DKNLAVFKLGDVRNYKIS 146 (464)
T ss_dssp EECCCTTCSCEE------EEEESSSSCEEEEEEEECTTCEEEECTTCS--------------CCBEEEEEECSEEEEEEE
T ss_pred EeccCCCcccCC------ceEeecccCccceEEECcCcceEEeCCCCC--------------CCCceEEEEEeeccEEEe
Confidence 77753 33432 3333 788999999999 99998742 347889999999999999
Q ss_pred ceEEEcCCCceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEE--EeCCceeEEEEeeEEc
Q 013309 194 NLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCIS--IVGNSSLIRIRNFACG 271 (445)
Q Consensus 194 ~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~--i~~~~~ni~I~n~~~~ 271 (445)
|++++|+ |.++ .|.++.+ .|+|||++ .|+||+|+||+|.++||++. ...+++||+|+||+|.
T Consensus 147 gIti~n~--w~ih--~s~~V~i-----------~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~ 210 (464)
T 1h80_A 147 NFTIDDN--KTIF--ASILVDV-----------TERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSE 210 (464)
T ss_dssp EEEEECC--SCBS--CSEEECE-----------EEETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEE
T ss_pred eeEEecc--ceEe--eceeeee-----------ecCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEE
Confidence 9999994 4432 3333322 26899998 78999999999999999885 2346899999999999
Q ss_pred CCceEEEeecCC---cCCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCCccEEEEeeeCCCCCC
Q 013309 272 PGHGISIGSLGK---SNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVP 348 (445)
Q Consensus 272 ~~~gi~igs~g~---~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~ 348 (445)
+++|+.|.+-+. ....+.++||+|+||+|.+..++|.|++. .+.++||+|+||++.++..++.|++.|++...+
T Consensus 211 gg~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~---~~~isnItfeNI~~t~~~~aI~i~q~y~~~fd~ 287 (464)
T 1h80_A 211 GGIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPH---FMKNGDVQVTNVSSVSCGSAVRSDSGFVELFSP 287 (464)
T ss_dssp SSEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEECT---TCBCCCEEEEEEEEESSSCSEEECCCCCEECC-
T ss_pred CCCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEeCC---CceEeEEEEEEEEEEccceeEEEecCcccccCc
Confidence 888999976200 12457899999999999999999999843 247899999999999999999999999865331
Q ss_pred CCCCCCcceEEEEEEEeEE
Q 013309 349 CANQTSAVKVENITFIHIK 367 (445)
Q Consensus 349 ~~~~~~~~~i~ni~f~ni~ 367 (445)
......+.+|+|-.
T Consensus 288 -----~~~~~~~~~~~~~~ 301 (464)
T 1h80_A 288 -----TDEVHTRQSWKQAV 301 (464)
T ss_dssp -------------------
T ss_pred -----cccccccceecccc
Confidence 11245666666554
No 14
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=2.6e-39 Score=333.27 Aligned_cols=300 Identities=18% Similarity=0.189 Sum_probs=223.3
Q ss_pred CeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEe-eeeeecCCCCCCeeEeEee----EEECCCC
Q 013309 52 KRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLI-HPIDISGPCKSRLTLEISG----TIVAPKD 126 (445)
Q Consensus 52 ~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~-~~l~l~~~~~s~v~l~~~G----~i~~~~~ 126 (445)
++++||+||||+|||.+|||+|||+||++ +++|+||+| +|++ ++|.| +++++|++++ +|+++.+
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~------Gg~V~iP~G-tYlis~~l~l----~snv~L~g~g~~~t~L~~~~~ 88 (609)
T 3gq8_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYG-TFMVSRGIKL----PSNTVLTGAGKRNAVIRFMDS 88 (609)
T ss_dssp SSSEEGGGGTCCCEEEEECHHHHHHHHHT------SSCEEECSE-EEEESSCEEE----CSSEEEEESCTTTEEEEECTT
T ss_pred CcEEEeEecccCCCCCchhHHHHHHHHHc------CCEEEECCc-cEEEeCceEE----CCCcEEEEeeCCCCEEEeCCC
Confidence 56899999999999999999999999993 389999999 9999 89999 8999999985 6676655
Q ss_pred cCCcCCCCccccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCceeE
Q 013309 127 PDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIA 206 (445)
Q Consensus 127 ~~~~~~~~~~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~ 206 (445)
.+.|.. ....++++.+++||+|+|. +|||+|+.||.. . ..++..||++|.|.+|+|++|++++++|++.+++.
T Consensus 89 ~p~~~~-li~~lI~a~~~~NItItG~-TIDGNG~~~g~~-~----~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~ 161 (609)
T 3gq8_A 89 VGRGES-LMYNENVTTGNENIFLSSF-TLDGNNKRLGQG-I----SGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGID 161 (609)
T ss_dssp CCSSCC-SEEESCTTTCCEEEEEEEE-EEECCGGGGCSS-C----CCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEE
T ss_pred CCCCCc-eeeeeeeecccccEEEEee-EEECCccccCcc-c----ccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeE
Confidence 443321 1123456778999999996 999999844432 1 12346799999999999999999999999986554
Q ss_pred EEceecEEEEeEEEECCCCCCCCCceeeec------eecEEEEeeEEe-cCCccEEEeCCceeEEEEeeEEcC------C
Q 013309 207 FTNCLRVVISNLEVIAPAESPNTDGIHISA------SRGVEVKNSIVG-TGDDCISIVGNSSLIRIRNFACGP------G 273 (445)
Q Consensus 207 ~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~------s~nv~I~n~~i~-~gdD~i~i~~~~~ni~I~n~~~~~------~ 273 (445)
+ .++.. | ||+++++ |+||+|+||+|+ ++||||++++ ++||+|+||+|++ +
T Consensus 162 I-------------~~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~~ 224 (609)
T 3gq8_A 162 I-------------TCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANC 224 (609)
T ss_dssp E-------------ECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSSC
T ss_pred E-------------eCCCC--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCCc
Confidence 4 33332 2 5666665 999999999995 5999999987 9999999999943 4
Q ss_pred ceEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeE-EEecCC-ccEEEEeeeCCCCCCCCC
Q 013309 274 HGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDV-LMKNVS-NPIIIDQYYCDSPVPCAN 351 (445)
Q Consensus 274 ~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni-~~~~~~-~~i~i~~~~~~~~~~~~~ 351 (445)
+|++||+ ..+||+|+||++.++.+|++||++. ..+.++||++.|. .++++. +.+..-.+|.. .
T Consensus 225 ~GIsIGs--------gs~NVtV~Nc~i~nt~~GIrIKt~~-~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a------~ 289 (609)
T 3gq8_A 225 NGFEIDD--------GSRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRSYNFRHIGHHAA------T 289 (609)
T ss_dssp CSEEECT--------TCEEEEEESEEEESSSEEEEEEECT-TSCCCEEEEEEEEEEESCSEEEEEEETTSCST------T
T ss_pred ccEEccC--------CcccEEEEeeEEECCCCEEEEEecC-CCCccccEEEECCEeecCceEecceEEccccC------C
Confidence 6899985 2399999999999999999999864 4578999999984 555542 23333222211 0
Q ss_pred CCCcceEEEEEEEeEEEEccCcc----------eEEEEe-------------cCC-----------CCeeCeEEEeEEEE
Q 013309 352 QTSAVKVENITFIHIKGTSATEE----------AIKFAC-------------SDD-----------SPCEGLFLEDVQLV 397 (445)
Q Consensus 352 ~~~~~~i~ni~f~ni~~~~~~~~----------~~~i~~-------------~~~-----------~~~~~i~~~nv~i~ 397 (445)
++......||+++|++....... ++.+.+ ++. ..+++++|++|.++
T Consensus 290 dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~d~~y~~~~~~~~~q~~~~~~~l~~~~i~ 369 (609)
T 3gq8_A 290 APQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVVLT 369 (609)
T ss_dssp SCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEEEEEETTCEEEEEEEEEEE
T ss_pred CCCcceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCceEccCCccccCCceEEEEEecceeEEcceEEe
Confidence 11223567777777776654321 222222 111 25789999999988
Q ss_pred ecCC
Q 013309 398 SHSG 401 (445)
Q Consensus 398 ~~~~ 401 (445)
+...
T Consensus 370 gf~~ 373 (609)
T 3gq8_A 370 GFSN 373 (609)
T ss_dssp SCTT
T ss_pred cccC
Confidence 7654
No 15
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=1.2e-38 Score=332.76 Aligned_cols=300 Identities=18% Similarity=0.203 Sum_probs=222.0
Q ss_pred CeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEe-eeeeecCCCCCCeeEeEee----EEECCCC
Q 013309 52 KRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLI-HPIDISGPCKSRLTLEISG----TIVAPKD 126 (445)
Q Consensus 52 ~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~-~~l~l~~~~~s~v~l~~~G----~i~~~~~ 126 (445)
+.++||+||||+|||++|||+|||+||++ +++|+||+| +|++ ++|.| +++++|.+++ +|+++.+
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a------Gg~V~IPaG-tYlisg~I~L----~snv~L~Geg~~~t~Lk~~~d 88 (772)
T 3gqn_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYG-TFMVSRGIKL----PSNTVLTGAGKRNAVIRFMDS 88 (772)
T ss_dssp SSSEESGGGTCCCEEEEECHHHHHHHHHT------TSCEEECSE-EEEESSCEEE----CSSCEEEEEEEEEEEEEECTT
T ss_pred CcEEEeEecccCCCCChhHHHHHHHHHHc------CCEEEECCc-cEEEEeEEEE----CCCcEEEEecCCCCEEEeCCC
Confidence 56899999999999999999999999993 389999999 9999 89999 8999999985 5666655
Q ss_pred cCCcCCCCccccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCceeE
Q 013309 127 PDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIA 206 (445)
Q Consensus 127 ~~~~~~~~~~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~ 206 (445)
.+.|.. ....|+++.+++||+|+|. +|||+|+.||.. . ..++..||++|.|.+|+|++|++++++|++.+++.
T Consensus 89 ~p~~~~-li~~lI~a~gveNItItG~-TIDGNG~~~g~~-~----~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~ 161 (772)
T 3gqn_A 89 VGRGES-LMYNENVTTGNENIFLSSF-TLDGNNKRLGQG-I----SGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGID 161 (772)
T ss_dssp CCSSCC-SEEESCTTTCCEEEEEEEE-EEECCGGGGCSS-C----CCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEE
T ss_pred CCCCCc-eeeeeeeccCceeEEEEee-EEeCCccccCcc-c----ccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEE
Confidence 443321 1123456788999999996 999999844431 1 12345799999999999999999999999985544
Q ss_pred EEceecEEEEeEEEECCCCCCCCCceeeec------eecEEEEeeEEe-cCCccEEEeCCceeEEEEeeEEcC------C
Q 013309 207 FTNCLRVVISNLEVIAPAESPNTDGIHISA------SRGVEVKNSIVG-TGDDCISIVGNSSLIRIRNFACGP------G 273 (445)
Q Consensus 207 ~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~------s~nv~I~n~~i~-~gdD~i~i~~~~~ni~I~n~~~~~------~ 273 (445)
|.++.. | ||+++++ |+||+|+||+|+ ++||||++++ ++||+|+||+|.+ +
T Consensus 162 -------------I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~~ 224 (772)
T 3gqn_A 162 -------------ITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANC 224 (772)
T ss_dssp -------------EECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSSC
T ss_pred -------------EeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCCc
Confidence 444432 2 6666666 999999999995 5999999987 9999999999943 4
Q ss_pred ceEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEe-EEEecCC-ccEEEEeeeCCCCCCCCC
Q 013309 274 HGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLD-VLMKNVS-NPIIIDQYYCDSPVPCAN 351 (445)
Q Consensus 274 ~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~n-i~~~~~~-~~i~i~~~~~~~~~~~~~ 351 (445)
+||+||+ ..+||+|+||++.++.+|++||++ ++.+.++||++.| +.++++. +.+..-.++.. .
T Consensus 225 ~GIsIGs--------gs~NVtV~Nc~~~nT~nGIRIKt~-~~gg~v~NV~I~gnis~~dvrsynir~iG~h~a------~ 289 (772)
T 3gqn_A 225 NGFEIDD--------GSRHVVLSNNRSKGCYGGIEIKAH-GDAPAAYNISINGHMSVEDVRSYNFRHIGHHAA------T 289 (772)
T ss_dssp CSEEECT--------TCEEEEEEEEEEESSSEEEEECCC-TTSCCCEEEEEEEEEEESCSEEEEECCTTSCSS------S
T ss_pred ccEEecC--------CcccEEEEceEEECCCcEEEEEEe-CCCCccccEEEECCEEeccCeEecceEEccccC------C
Confidence 7899985 239999999999999999999976 4557899999985 7776642 12221111110 1
Q ss_pred CCCcceEEEEEEEeEEEEccCcc----------eEEEEe-------------cCC-----------CCeeCeEEEeEEEE
Q 013309 352 QTSAVKVENITFIHIKGTSATEE----------AIKFAC-------------SDD-----------SPCEGLFLEDVQLV 397 (445)
Q Consensus 352 ~~~~~~i~ni~f~ni~~~~~~~~----------~~~i~~-------------~~~-----------~~~~~i~~~nv~i~ 397 (445)
++......||.++|++....... ++.+.+ .+. ..+++++|+||.++
T Consensus 290 dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~~igd~~y~~~~~~i~~q~~~~~~~ln~i~i~ 369 (772)
T 3gqn_A 290 APQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVVLT 369 (772)
T ss_dssp SCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEEEEEETTCEEEEEEEEEEE
T ss_pred CCCCccCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCceeccCcccccCCceEEEEEecceeEEcceEEe
Confidence 11223567777777776654321 222221 111 25789999999988
Q ss_pred ecCC
Q 013309 398 SHSG 401 (445)
Q Consensus 398 ~~~~ 401 (445)
+...
T Consensus 370 gf~~ 373 (772)
T 3gqn_A 370 GFSN 373 (772)
T ss_dssp SCTT
T ss_pred cccC
Confidence 7654
No 16
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=3.5e-39 Score=335.25 Aligned_cols=269 Identities=13% Similarity=0.138 Sum_probs=216.6
Q ss_pred CCCcEEEEcCCcEEEe-------------eeeeecCCCCCCee-EeEe-eEEECCCCcCCcCCCCccccEEEeceeeEEE
Q 013309 85 PARTKIVFSAGYTFLI-------------HPIDISGPCKSRLT-LEIS-GTIVAPKDPDVWKGLNRRRWLYFNRVNHLTV 149 (445)
Q Consensus 85 ~gg~~v~~P~G~~Yl~-------------~~l~l~~~~~s~v~-l~~~-G~i~~~~~~~~~~~~~~~~~i~~~~~~nv~I 149 (445)
.++++|+||+| +|++ ++|.| +|+++ |+++ |+.+. .++.+.+++|++|
T Consensus 229 ~ggg~v~vP~G-~yl~~~~~~~gpc~~g~G~i~l----kSnvt~L~L~~GA~l~-------------g~i~~~~~~nv~I 290 (574)
T 1ogo_X 229 GAKSILYFPPG-VYWMNQDQSGNSGKLGSNHIRL----NSNTYWVYLAPGAYVK-------------GAIEYFTKQNFYA 290 (574)
T ss_dssp CSSSEEEECSE-EEEECBCTTCCBSCSSSCCEEC----CTTCCEEEECTTEEEE-------------SCEEECCSSCEEE
T ss_pred CCCCEEEECCc-EEEEeccccCCcccccceEEEe----cCCCceEEecCCcEEE-------------ccEEEeCceeEEE
Confidence 45789999999 9999 46888 88888 8888 65432 2478899999999
Q ss_pred EeceEEecCCchhhccccccCCCCCCCCCCeEEEEE------eecceEEeceEEEcCCCceeEEEceecE--EEEeEEEE
Q 013309 150 QGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFH------KCKNLKVQNLRVVNSQQMHIAFTNCLRV--VISNLEVI 221 (445)
Q Consensus 150 ~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~------~~~nv~I~~v~i~ns~~~~i~~~~~~nv--~I~n~~I~ 221 (445)
+|.|+|||+|..||...++. -..+..||+++.|. +|+||+|+|++++|++.|++++..|+++ +|+|+++.
T Consensus 291 tG~GtIDG~G~~ww~~~~~~--~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~ 368 (574)
T 1ogo_X 291 TGHGILSGENYVYQANAGDN--YIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQV 368 (574)
T ss_dssp ESSCEEECTTSCTTCBTTTT--TBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEE
T ss_pred EeCEEEeCCCcccccccccc--cccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEee
Confidence 99999999999999743221 11234588888888 9999999999999999999999999999 99999998
Q ss_pred CCCCCCCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcC--Cce-EEEeecCCcCCCccEEeEEEEcE
Q 013309 222 APAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGP--GHG-ISIGSLGKSNSSVRIHDIMVYGA 298 (445)
Q Consensus 222 ~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~--~~g-i~igs~g~~~~~~~v~nv~i~n~ 298 (445)
++. ..++||||+. +||+|+||+|+++||||++++ +||+|+||+|+. +|+ |+||| +.+.++||+|+||
T Consensus 369 ~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS-----~~g~V~NV~v~N~ 438 (574)
T 1ogo_X 369 GAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGW-----TSRDISGVTIDTL 438 (574)
T ss_dssp CCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCS-----SCCCEEEEEEEEE
T ss_pred CCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcC-----CCCcEEEEEEEeE
Confidence 743 2469999999 899999999999999999998 999999999875 456 99998 4689999999999
Q ss_pred EEeCCcc--------eEEEEEe---------cCCCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCcceEEEE
Q 013309 299 LISNTQN--------GVRIKTW---------QGGSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKVENI 361 (445)
Q Consensus 299 ~~~~~~~--------gi~i~~~---------~g~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni 361 (445)
+|.++.. +..+.+. ..+.| | ||+|+||+|+++..++ +.. + +...|+||
T Consensus 439 ~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i-~-----------p~~~I~nI 503 (574)
T 1ogo_X 439 NVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRI-T-----------PLQNYKNF 503 (574)
T ss_dssp EEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEE-C-----------CSEEEEEE
T ss_pred EEECCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEE-C-----------CCCCEEEE
Confidence 9988753 2322111 11224 8 9999999999998885 332 1 12479999
Q ss_pred EEEeEEEEc------cCcceEEEEecCCCCeeCeEEEeEEEEec
Q 013309 362 TFIHIKGTS------ATEEAIKFACSDDSPCEGLFLEDVQLVSH 399 (445)
Q Consensus 362 ~f~ni~~~~------~~~~~~~i~~~~~~~~~~i~~~nv~i~~~ 399 (445)
+|+||++++ ....+..+.+.+ .+|++|+|+||++.+.
T Consensus 504 ~~~NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 504 VVKNVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp EEEEEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETTE
T ss_pred EEEeEEEeCccccccccccceeEecCC-CccceEEEEeEEEeCE
Confidence 999999876 223345566666 8999999999999654
No 17
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=3.7e-30 Score=258.88 Aligned_cols=240 Identities=20% Similarity=0.229 Sum_probs=158.0
Q ss_pred eEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEee--------eeeecCCCCCCeeEeEee---E-E
Q 013309 54 VIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIH--------PIDISGPCKSRLTLEISG---T-I 121 (445)
Q Consensus 54 ~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~--------~l~l~~~~~s~v~l~~~G---~-i 121 (445)
+++|+||||+|||.+|||+|||+||++|++. ++++|+||+| +|++. +|.+ +++++|+++| + |
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~-gg~~v~~p~G-~y~~~~~~~~~~g~l~~----~~~v~l~g~g~~~t~l 75 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAA-GGGTVYLPAG-EYRVSAAGEPGDGCLML----KDGVYLAGAGMGETVI 75 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHT-TSEEEEECSE-EEEECCCSSGGGCSEEC----CTTEEEEESSBTTEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhc-CCCEEEECCe-EEEEcccccCCcccEEe----cCCeEEEEcCCCCcEE
Confidence 6899999999999999999999999977654 5789999999 99994 7888 8999999985 3 4
Q ss_pred ECCCCcCCcCC----CCccccEEEeceeeEEEEec-----eEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEE
Q 013309 122 VAPKDPDVWKG----LNRRRWLYFNRVNHLTVQGG-----GTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKV 192 (445)
Q Consensus 122 ~~~~~~~~~~~----~~~~~~i~~~~~~nv~I~G~-----G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I 192 (445)
++.++...+.. .....-....+++|++|.|. |++|| ||...++ . .+..|++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~--------~-----~~~~~~nv~I 138 (377)
T 2pyg_A 76 KLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYIP--------G-----GDGADRDVTI 138 (377)
T ss_dssp EECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSCT--------T-----SSCCEEEEEE
T ss_pred EecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccCc--------c-----ccccccceEE
Confidence 55544332210 00000113457899999997 88887 8864221 1 1247999999
Q ss_pred eceEEEcCCCceeEEEcee-cEEEEeEEEECCC-------------------CCCCCCceeeec-eecEEEEeeEEecCC
Q 013309 193 QNLRVVNSQQMHIAFTNCL-RVVISNLEVIAPA-------------------ESPNTDGIHISA-SRGVEVKNSIVGTGD 251 (445)
Q Consensus 193 ~~v~i~ns~~~~i~~~~~~-nv~I~n~~I~~~~-------------------~~~n~DGi~~~~-s~nv~I~n~~i~~gd 251 (445)
+++++++++.|++++..|. +++++|+.+.... ..++.|||++.. |++++|+++.+...+
T Consensus 139 ~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~ 218 (377)
T 2pyg_A 139 ERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNG 218 (377)
T ss_dssp EEEEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCS
T ss_pred EeEEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECcc
Confidence 9999999999999998765 6788877775410 012345555444 455555555555444
Q ss_pred ccEEEe-------CCceeEEEEeeEEcC--CceEEEeecCCcCCCccEEeEEEEcEEEeCC-cceEEEEEecCCCceeee
Q 013309 252 DCISIV-------GNSSLIRIRNFACGP--GHGISIGSLGKSNSSVRIHDIMVYGALISNT-QNGVRIKTWQGGSGSATN 321 (445)
Q Consensus 252 D~i~i~-------~~~~ni~I~n~~~~~--~~gi~igs~g~~~~~~~v~nv~i~n~~~~~~-~~gi~i~~~~g~~g~v~n 321 (445)
+++.+. ..++|++|+++++++ .+|+.+. .+++++|+|+++.++ ..||+|+. +++
T Consensus 219 ~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~---------~~~~v~i~~N~i~~~~~~GI~i~g-------~~~ 282 (377)
T 2pyg_A 219 SSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLK---------MTSDITLQNADIHGNGSSGVRVYG-------AQD 282 (377)
T ss_dssp SCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEE---------EEEEEEEESCEEESCSSCSEEEEE-------EEE
T ss_pred CceEEEeccccCCCCCccEEEECCEEEcCccCceEec---------cccCeEEECCEEECCCCceEEEec-------CCC
Confidence 444441 224455555555443 2344432 246666666666665 55666652 567
Q ss_pred EEEEeEEEecC
Q 013309 322 IQFLDVLMKNV 332 (445)
Q Consensus 322 i~~~ni~~~~~ 332 (445)
++|+|+++.+.
T Consensus 283 ~~i~~N~i~~n 293 (377)
T 2pyg_A 283 VQILDNQIHDN 293 (377)
T ss_dssp EEEESCEEESC
T ss_pred cEEECcEEECC
Confidence 77777777654
No 18
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.97 E-value=8e-32 Score=262.48 Aligned_cols=213 Identities=18% Similarity=0.225 Sum_probs=166.6
Q ss_pred CeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCc---EEEe-eeeeecCCCCCCeeEeEee--EEECCC
Q 013309 52 KRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGY---TFLI-HPIDISGPCKSRLTLEISG--TIVAPK 125 (445)
Q Consensus 52 ~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~---~Yl~-~~l~l~~~~~s~v~l~~~G--~i~~~~ 125 (445)
+..+||+||||+|||++|||+|||+||++||+.+++++|+||+|. +|++ +++.| +++++|++++ .++.+.
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~L----kSnV~L~Ge~~AtIl~s~ 124 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLI----PGGVNIRGVGKASQLRAK 124 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEE----CTTEEEECCSTTSEEEEC
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEe----cCCeEEEEecCceEeecc
Confidence 568999999999999999999999999988887678999999995 6887 58999 8999999883 443321
Q ss_pred Cc-C-CcCCCCccccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEE--EcCC
Q 013309 126 DP-D-VWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRV--VNSQ 201 (445)
Q Consensus 126 ~~-~-~~~~~~~~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i--~ns~ 201 (445)
.. . .+......+++.+.+++|++|+|.|+|||++..|+.... ..|+ .....+++|.|++++. .+++
T Consensus 125 ~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~--------~~Rq--~~~~~fdnV~Vn~Vt~~v~~Sg 194 (514)
T 2vbk_A 125 SGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDS--------VIRQ--VYGWVFDNVMVNEVETAYLMQG 194 (514)
T ss_dssp TTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTTCS--------SCCC--EESEEEESCEEEEEEEEEEEES
T ss_pred ccccccEEeccCCccccccCceEEEEECCCeEeCCCCCccccce--------eeec--cceEEeeeEEEEeEEEeEeccC
Confidence 11 0 000011235677888999999999999998765532110 1222 2223477999999965 4788
Q ss_pred CceeEEEceecEEEE-eEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEEEeCC-----------ceeEEEEeeE
Q 013309 202 QMHIAFTNCLRVVIS-NLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVGN-----------SSLIRIRNFA 269 (445)
Q Consensus 202 ~~~i~~~~~~nv~I~-n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~-----------~~ni~I~n~~ 269 (445)
.|++++..|++++++ ++++. .+|+||+|.||+|..|||||++|+| ++||.
T Consensus 195 ~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~----- 256 (514)
T 2vbk_A 195 LWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR----- 256 (514)
T ss_dssp EEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC-----
T ss_pred cEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc-----
Confidence 999999999999987 55553 2799999999999999999999985 66666
Q ss_pred EcCCce-EEEeecCCcC-CCccEEe-EEEEcEEEeCCc
Q 013309 270 CGPGHG-ISIGSLGKSN-SSVRIHD-IMVYGALISNTQ 304 (445)
Q Consensus 270 ~~~~~g-i~igs~g~~~-~~~~v~n-v~i~n~~~~~~~ 304 (445)
|| +.||| | +.++++| |++++|.|.+++
T Consensus 257 ----hgav~igS----E~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 257 ----SEAIILDS----ETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp ----CEEEEEES----SEEEESCSEEEEESCCEEEEEE
T ss_pred ----cccEEECc----hhhcccccccEEEEeeeccCCc
Confidence 75 99999 5 7889999 999999999875
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.92 E-value=1.2e-23 Score=214.07 Aligned_cols=228 Identities=14% Similarity=0.179 Sum_probs=180.8
Q ss_pred ccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcC--CCceeEEEceecEE
Q 013309 137 RWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNS--QQMHIAFTNCLRVV 214 (445)
Q Consensus 137 ~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns--~~~~i~~~~~~nv~ 214 (445)
.++.+.+++|++|+|..+.+.. +| .+.+..|+|++|+++++.++ ...++++..|+||+
T Consensus 191 ~~i~~~~~~nv~i~giti~nsp---~~-----------------~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~ 250 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGVKIINSP---MW-----------------CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYML 250 (448)
T ss_dssp CSEEEESCEEEEEESCEEESCS---SC-----------------SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEE
T ss_pred eEEEEEcccceEEEeeEEEeCC---Cc-----------------eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEE
Confidence 4799999999999996555432 24 38999999999999999985 46789999999999
Q ss_pred EEeEEEECCCC------CCCCCceeeec-eecEEEEeeEE--ecCCccEEEeCC----ceeEEEEeeEEcCC-ceEEEee
Q 013309 215 ISNLEVIAPAE------SPNTDGIHISA-SRGVEVKNSIV--GTGDDCISIVGN----SSLIRIRNFACGPG-HGISIGS 280 (445)
Q Consensus 215 I~n~~I~~~~~------~~n~DGi~~~~-s~nv~I~n~~i--~~gdD~i~i~~~----~~ni~I~n~~~~~~-~gi~igs 280 (445)
|+|+.|.+.+| ..+.||+++.. |+||+|+||++ ..++.+|++++. .+||+|+||++.++ +|+.|++
T Consensus 251 I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt 330 (448)
T 3jur_A 251 IEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKT 330 (448)
T ss_dssp EESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEEC
T ss_pred EEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEE
Confidence 99999998543 12334444433 89999999999 556679999874 59999999999876 7999998
Q ss_pred cCCcCCCccEEeEEEEcEEEeCCcceE-EEEEecC-----CCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCC
Q 013309 281 LGKSNSSVRIHDIMVYGALISNTQNGV-RIKTWQG-----GSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTS 354 (445)
Q Consensus 281 ~g~~~~~~~v~nv~i~n~~~~~~~~gi-~i~~~~g-----~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~ 354 (445)
.. ...+.++||+|+|++|.+..+++ .|..... ..+.++||+|+||+.++...++.|... +
T Consensus 331 ~~--g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~------------~ 396 (448)
T 3jur_A 331 NS--RRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL------------E 396 (448)
T ss_dssp CT--TTCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB------------T
T ss_pred Ec--CCCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC------------C
Confidence 53 23589999999999999998887 8876421 346899999999999987778887521 2
Q ss_pred cceEEEEEEEeEEEEccCcceEEEEe----cCCCCeeCeEEEeEEEEec
Q 013309 355 AVKVENITFIHIKGTSATEEAIKFAC----SDDSPCEGLFLEDVQLVSH 399 (445)
Q Consensus 355 ~~~i~ni~f~ni~~~~~~~~~~~i~~----~~~~~~~~i~~~nv~i~~~ 399 (445)
..+++||+|+||+++.... +..+.. .....+++++|+||+|++.
T Consensus 397 ~~p~~~I~~~nv~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 397 NDYVKDILISDTIIEGAKI-SVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp TBCEEEEEEEEEEEESCSE-EEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEeeEEEEEEEEEcccc-ceeEeccccccccceecccEEEEEEEcCE
Confidence 3479999999999998765 444543 3445699999999999864
No 20
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.91 E-value=3.4e-23 Score=216.72 Aligned_cols=265 Identities=17% Similarity=0.227 Sum_probs=193.2
Q ss_pred CCCeeEEeecccccCCCCCccHHHHHHHHHHHcCCCC--------CcEEEEcCCcEEEee-eeeecCCCCCCeeEeEee-
Q 013309 50 KSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPA--------RTKIVFSAGYTFLIH-PIDISGPCKSRLTLEISG- 119 (445)
Q Consensus 50 ~~~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~g--------g~~v~~P~G~~Yl~~-~l~l~~~~~s~v~l~~~G- 119 (445)
..+..+||+||||+|||++|||+|||+||+++.+..+ +++|+||+| +|++. +|.+ ++++.|.+++
T Consensus 45 ~y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~G-tYlvs~tI~l----~~~t~L~G~~~ 119 (758)
T 3eqn_A 45 GYPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPG-TYKVSSPLVV----LYQTQLIGDAK 119 (758)
T ss_dssp TCCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSS-EEEESSCEEC----CTTEEEEECSS
T ss_pred CCeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCc-eEEEcccEEc----cCCeEEEecCC
Confidence 4567889999999999999999999999995422221 269999999 99985 8999 8999999984
Q ss_pred ---EEECCCCcCCcCCCCccccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceE
Q 013309 120 ---TIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLR 196 (445)
Q Consensus 120 ---~i~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~ 196 (445)
+|++... |.+ ..+ |.+ +..+++|..||... ...+..++|++|+ ++
T Consensus 120 ~~pvIka~~~---F~G---~~l----------i~~-d~y~~~G~~w~~~~--------------~~F~r~irNlviD-~t 167 (758)
T 3eqn_A 120 NLPTLLAAPN---FSG---IAL----------IDA-DPYLAGGAQYYVNQ--------------NNFFRSVRNFVID-LR 167 (758)
T ss_dssp SCCEEEECTT---CCS---SCS----------EES-SCBCGGGCBSSCGG--------------GCCCEEEEEEEEE-CT
T ss_pred CCCeEecCCC---CCC---cce----------eec-cccCCCCccccccc--------------cceeeeecceEEe-cc
Confidence 5655432 221 111 233 33566778888642 2445577888888 66
Q ss_pred EEcCCCceeEEEceecEEEEeEEEECCCCC-CCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcCCc-
Q 013309 197 VVNSQQMHIAFTNCLRVVISNLEVIAPAES-PNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGH- 274 (445)
Q Consensus 197 i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~-~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~~~- 274 (445)
-.++...+|++..|++..|+||.|..+..+ ..++||++..+.++.|+|++|..|+-++.++. +..+++|.+|.++.
T Consensus 168 ~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn--QQfT~rnltF~~~~t 245 (758)
T 3eqn_A 168 QVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN--QQFTVRNLTFNNANT 245 (758)
T ss_dssp TCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC--SCCEEEEEEEESCSE
T ss_pred ccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC--cceEEeccEEeChHH
Confidence 666678899999999999999999997765 34999999988899999999999998888854 78888888888765
Q ss_pred eEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEecC---CCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCC
Q 013309 275 GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQG---GSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCAN 351 (445)
Q Consensus 275 gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g---~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~ 351 (445)
+|.+..- -..++.+++|.++..||.+..... ..-.+-.|++.|-+++|+..+|. ..+.... .
T Consensus 246 aI~~~w~---------wgwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~--t~~~~~~----~ 310 (758)
T 3eqn_A 246 AINAIWN---------WGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVR--WSGASSG----H 310 (758)
T ss_dssp EEEEEEB---------SCEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEE--ESSCCCS----S
T ss_pred HHhhhcC---------ceEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEE--eccCCCC----C
Confidence 6655321 146777888888878888864211 12257789999999999875543 3322211 1
Q ss_pred CCCcceEEEEEEEeEEE
Q 013309 352 QTSAVKVENITFIHIKG 368 (445)
Q Consensus 352 ~~~~~~i~ni~f~ni~~ 368 (445)
......|+||.++|+..
T Consensus 311 ~~~slvleNv~~~nv~~ 327 (758)
T 3eqn_A 311 LQGSLVLNNIQLTNVPV 327 (758)
T ss_dssp CSSEEEEEEEEEEEEEE
T ss_pred CcceEEEEeEEeeCCCe
Confidence 12346788888888654
No 21
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.91 E-value=2.8e-22 Score=212.09 Aligned_cols=247 Identities=11% Similarity=0.025 Sum_probs=195.5
Q ss_pred cccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEc--C-CCceeEEEceec
Q 013309 136 RRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVN--S-QQMHIAFTNCLR 212 (445)
Q Consensus 136 ~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~n--s-~~~~i~~~~~~n 212 (445)
..++.+.+++|++|+|..+.+.. +| .+.+.+|+|++|+++++.+ + ...++++..|++
T Consensus 331 P~~i~~~~~~nv~I~giti~ns~---~~-----------------~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~n 390 (608)
T 2uvf_A 331 SSLMTLRGVENVYLAGFTVRNPA---FH-----------------GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQN 390 (608)
T ss_dssp CCSEEEESEEEEEEESCEEECCS---SC-----------------SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEE
T ss_pred CeEEEEEeeeeEEEeCcEEecCC---CC-----------------EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCce
Confidence 35799999999999996554432 24 3899999999999999875 2 366899999999
Q ss_pred EEEEeEEEECCCC------CCCCCceeeeceecEEEEeeEEecCCccEEEeC----CceeEEEEeeEEcCC-ceEEEeec
Q 013309 213 VVISNLEVIAPAE------SPNTDGIHISASRGVEVKNSIVGTGDDCISIVG----NSSLIRIRNFACGPG-HGISIGSL 281 (445)
Q Consensus 213 v~I~n~~I~~~~~------~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~----~~~ni~I~n~~~~~~-~gi~igs~ 281 (445)
|+|+|++|.+.+| +.+.||++...|+||+|+||++..+++++++++ +.+||+|+||++.++ +|++|++.
T Consensus 391 V~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~ 470 (608)
T 2uvf_A 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKST 470 (608)
T ss_dssp EEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEE
T ss_pred EEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeee
Confidence 9999999998664 245667776669999999999999999988887 359999999999876 69999985
Q ss_pred CCcCCCccEEeEEEEcEEEeCC-cceEEEEEecC------------CCceeeeEEEEeEEEecCC---ccEEEEeeeCCC
Q 013309 282 GKSNSSVRIHDIMVYGALISNT-QNGVRIKTWQG------------GSGSATNIQFLDVLMKNVS---NPIIIDQYYCDS 345 (445)
Q Consensus 282 g~~~~~~~v~nv~i~n~~~~~~-~~gi~i~~~~g------------~~g~v~ni~~~ni~~~~~~---~~i~i~~~~~~~ 345 (445)
.. ..+.++||+|+|++|.+. .++|.|+.... ..+.+++|+|+||+++++. .++.|... |.
T Consensus 471 ~g--~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~-~~- 546 (608)
T 2uvf_A 471 ST--IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD-TA- 546 (608)
T ss_dssp TT--TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-GG-
T ss_pred cC--CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-cC-
Confidence 32 357899999999999998 58999986532 2367999999999999876 36776632 21
Q ss_pred CCCCCCCCCcceEEEEEEEeEEEEccCcceEEEEecCCCCeeCeEEEeEEEEecCCCccceeeeeeeecccceecCC
Q 013309 346 PVPCANQTSAVKVENITFIHIKGTSATEEAIKFACSDDSPCEGLFLEDVQLVSHSGGIAKSFCWEAYGSSVGQVEPP 422 (445)
Q Consensus 346 ~~~~~~~~~~~~i~ni~f~ni~~~~~~~~~~~i~~~~~~~~~~i~~~nv~i~~~~~~~~~~~c~n~~~~~~~~~~p~ 422 (445)
...+++||+|+||+++... +..+. .|++++|+||.++...+ ...+.|.++.+..+..+.|+
T Consensus 547 --------~~~p~~ni~~~nv~i~~~~--~~~i~-----~~~~~~~~nv~i~~~~~-~~~~~~~~v~~~~~~~v~~~ 607 (608)
T 2uvf_A 547 --------NKAWHRLVHVNNVQLNNVT--PTAIS-----DLRDSEFNKVTFTELRG-DTPWHFSEVKNVKVDGKPVA 607 (608)
T ss_dssp --------GTBCEEEEEEEEEEEESCC--CCEEE-----SEESCEEEEEEEESCSS-SCSCCEESCBSCCBTTCCC-
T ss_pred --------CCCccccEEEEeEEEEccC--ceeEE-----eccCceEEeEEEeCCCC-CccEEEEeeeceEEcceEeC
Confidence 2347999999999999865 44444 48899999999987653 24589999998776445553
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.86 E-value=3.6e-19 Score=175.54 Aligned_cols=225 Identities=19% Similarity=0.254 Sum_probs=174.1
Q ss_pred EEEEEeecceEEece---EEEcCC--Cc-------------eeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEE
Q 013309 181 AITFHKCKNLKVQNL---RVVNSQ--QM-------------HIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEV 242 (445)
Q Consensus 181 ~i~~~~~~nv~I~~v---~i~ns~--~~-------------~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I 242 (445)
++.+. .+|++|.|. +|.... .| .+.+..|++++|+++++.+.+ ..+|++..|+||+|
T Consensus 66 li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVS-GSDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEE-EESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEE-cCcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeEE
Confidence 45664 499999997 675432 22 488999999999999999843 46899999999999
Q ss_pred EeeEEecC---------CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEe
Q 013309 243 KNSIVGTG---------DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTW 312 (445)
Q Consensus 243 ~n~~i~~g---------dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~ 312 (445)
++++|.+. .|+|.+.+ ++||+|+||++..++ +++|++ -+||+|+||++.+. +|+.|.+.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiks---------g~nI~i~n~~~~~g-hGisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNS---------GENIYFSGGYCSGG-HGLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESS---------EEEEEEESCEEESS-SCEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeC---------CeEEEEEeEEEECC-ceEEECcC
Confidence 99999862 57788877 999999999998765 699987 18999999999986 79999885
Q ss_pred cC-CCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccCcceEEEEec-------C--
Q 013309 313 QG-GSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSATEEAIKFACS-------D-- 382 (445)
Q Consensus 313 ~g-~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~~~~~~i~~~-------~-- 382 (445)
.. ..+.++||+|+|+++.+..+++.|+.+. ...+.++||+|+||++.....+++.|... +
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~ 279 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNI----------DTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTT 279 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEET----------TCCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeC----------CCCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcC
Confidence 32 3478999999999999999999999752 12368999999999999877668877742 2
Q ss_pred CCCeeCeEEEeEEEEecCCC-cc-----ceeeeeeeeccc---ceecCCCccCCCCCc
Q 013309 383 DSPCEGLFLEDVQLVSHSGG-IA-----KSFCWEAYGSSV---GQVEPPPCFACSEGL 431 (445)
Q Consensus 383 ~~~~~~i~~~nv~i~~~~~~-~~-----~~~c~n~~~~~~---~~~~p~~c~~~~~~~ 431 (445)
..+++||+|+||+.+...+. +. ...|+|+...-. +...++.|.+.+.|+
T Consensus 280 ~~~i~ni~~~ni~gt~~~~~~~v~i~c~~~~c~ni~~~nv~i~~~~~~~~C~n~~~g~ 337 (339)
T 1ia5_A 280 GVPITDFVLDNVHGSVVSSGTNILISCGSGSCSDWTWTDVSVSGGKTSSKCTNVPSGA 337 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEECCTTCEEEEEEEEEEEESSBCCSCCBSCCTTC
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEEeCCCCEecEEEEeEEEECCCCCeeeECCCCCC
Confidence 35799999999999887522 22 233566554432 222346788877554
No 23
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.85 E-value=3.1e-19 Score=177.21 Aligned_cols=224 Identities=13% Similarity=0.134 Sum_probs=171.4
Q ss_pred EEEEEeecceEEec---eEEEcCC--Cc------------eeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEE
Q 013309 181 AITFHKCKNLKVQN---LRVVNSQ--QM------------HIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVK 243 (445)
Q Consensus 181 ~i~~~~~~nv~I~~---v~i~ns~--~~------------~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~ 243 (445)
++.+ +.+|++|.| -+|.... .| .+.+..|+|++|+++++.+.+. .++++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~----~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPL----MAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSS----CCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCc----cEEEEe-eCCEEEE
Confidence 4666 559999999 4665332 23 4889999999999999998532 369999 9999999
Q ss_pred eeEEecC---------CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEec
Q 013309 244 NSIVGTG---------DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQ 313 (445)
Q Consensus 244 n~~i~~g---------dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~ 313 (445)
|++|.+. .|+|.+.+ ++||+|+||++..++ +++|++ | +||+|+||++.+. +||.|.+..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiks-g--------~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNS-G--------ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESS-E--------EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeC-C--------eEEEEEEEEEeCC-ceeEEeecc
Confidence 9999872 47788876 999999999999875 699987 1 8999999999986 799999852
Q ss_pred -CCCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccCcceEEEEec---------C-
Q 013309 314 -GGSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSATEEAIKFACS---------D- 382 (445)
Q Consensus 314 -g~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~~~~~~i~~~---------~- 382 (445)
...+.++||+|+|+++.+..++++|+.+.. ..+.++||+|+||++.....+++.|... +
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG----------ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC----------CCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 245799999999999999999999997521 2468999999999999876457777632 1
Q ss_pred -CCCeeCeEEEeEEEEecCCC-ccce-----eeeeeeeccc---ceecCCCccCCCCCc
Q 013309 383 -DSPCEGLFLEDVQLVSHSGG-IAKS-----FCWEAYGSSV---GQVEPPPCFACSEGL 431 (445)
Q Consensus 383 -~~~~~~i~~~nv~i~~~~~~-~~~~-----~c~n~~~~~~---~~~~p~~c~~~~~~~ 431 (445)
..+++||+|+||+.+...+. +... .|+|+...-. +...++.|.+.++|+
T Consensus 302 ~~~~i~nI~~~ni~gt~~~~~~~i~i~c~~~~c~ni~~~nv~i~~~~~~~~C~n~~~g~ 360 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDSGATEIYLLCGSGSCSDWTWDDVKVTGGKKSTACKNFPSVA 360 (362)
T ss_dssp SSEEEEEEEEEEEEEEECTTSEEEEEECCTTTEEEEEEEEEEEESSBCCSCCBSCCTTC
T ss_pred CCceEEEEEEEEEEEEecCCceEEEEEeCCCcCcCEEEEeEEEEcCCCcccCcCCCCCC
Confidence 24699999999999877622 2222 4666654432 222345788877554
No 24
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.85 E-value=1.1e-18 Score=172.29 Aligned_cols=224 Identities=17% Similarity=0.212 Sum_probs=172.8
Q ss_pred EEEEEeecceEEece---EEEcC--CCc-------------eeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEE
Q 013309 181 AITFHKCKNLKVQNL---RVVNS--QQM-------------HIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEV 242 (445)
Q Consensus 181 ~i~~~~~~nv~I~~v---~i~ns--~~~-------------~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I 242 (445)
++.+.. +|++|.|. +|... ..| .+.+..|++++|+++++.+.+ ..+|++..|+||+|
T Consensus 62 ~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLGV 136 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEEE
Confidence 456654 99999997 77543 223 488999999999999999843 46799999999999
Q ss_pred EeeEEecC---------CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEe
Q 013309 243 KNSIVGTG---------DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTW 312 (445)
Q Consensus 243 ~n~~i~~g---------dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~ 312 (445)
+|++|.+. .|+|.+.+ ++||+|+||++..++ +++|++ -+||+|+||++.+. +|+.|.+.
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDciaiks---------g~nI~i~n~~~~~g-hGisiGSl 205 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS-STGVYISGANVKNQDDCLAINS---------GTNITFTGGTCSGG-HGLSIGSV 205 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESS---------EEEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCccccccCCCCCcEEEcC-cceEEEEecEEecCCCEEEEcC---------CccEEEEeEEEECC-ceEEECcC
Confidence 99999863 46788877 999999999998764 699987 18999999999986 69999885
Q ss_pred cC-CCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccCcceEEEEec---------C
Q 013309 313 QG-GSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSATEEAIKFACS---------D 382 (445)
Q Consensus 313 ~g-~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~~~~~~i~~~---------~ 382 (445)
.. ..+.++||+|+|+++.+..+++.|+.+.. ..+.++||+|+||++.....+++.|... +
T Consensus 206 g~~~~~~v~nV~v~n~~~~~~~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 275 (339)
T 2iq7_A 206 GGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG----------ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTP 275 (339)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCC
Confidence 22 34789999999999999999999998621 2368999999999999876657777532 1
Q ss_pred --CCCeeCeEEEeEEEEecCCC-ccce-----eeeeeeeccc---ceecCCCccCCCCC
Q 013309 383 --DSPCEGLFLEDVQLVSHSGG-IAKS-----FCWEAYGSSV---GQVEPPPCFACSEG 430 (445)
Q Consensus 383 --~~~~~~i~~~nv~i~~~~~~-~~~~-----~c~n~~~~~~---~~~~p~~c~~~~~~ 430 (445)
..+++||+|+||+.+...+. +... .|+|+...-. +...++.|.+.++|
T Consensus 276 ~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~~~~c~ni~~~nv~i~~~~~~~~C~n~~~~ 334 (339)
T 2iq7_A 276 TNGVPITGLTLSKITGSVASSGTNVYILCASGACSNWKWSGVSVTGGKKSTKCSNIPSG 334 (339)
T ss_dssp CSSSCEEEEEEEEEEEEECTTSEEEEEECCTTCEEEEEEEEEEEESSBCCSCCBCCCTT
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEeCCCcEecEEEEeEEEEcCCCcccccCCCCC
Confidence 25799999999999987622 2223 3566554432 22234568887644
No 25
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.85 E-value=8.3e-19 Score=172.86 Aligned_cols=224 Identities=18% Similarity=0.214 Sum_probs=171.8
Q ss_pred EEEEEeecceEEece---EEEcCC--Cc-------------eeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEE
Q 013309 181 AITFHKCKNLKVQNL---RVVNSQ--QM-------------HIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEV 242 (445)
Q Consensus 181 ~i~~~~~~nv~I~~v---~i~ns~--~~-------------~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I 242 (445)
++.+ ..+||+|.|. +|.... .| .+.+..|+|++|+++++.+.+ .-++++. |+|++|
T Consensus 62 li~~-~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRF-GGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP----VQAISVQ-ATNVHL 135 (336)
T ss_dssp SEEC-CEESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEE-EEEEEE
T ss_pred EEEE-ecCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC----ccEEEEE-eCCEEE
Confidence 3555 4599999997 665432 22 488999999999999999853 2369999 999999
Q ss_pred EeeEEecC---------CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEe
Q 013309 243 KNSIVGTG---------DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTW 312 (445)
Q Consensus 243 ~n~~i~~g---------dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~ 312 (445)
+|++|.+. .|+|.+.+ ++||+|+||++..++ +++|++ -+||+|+||++.+. +|+.|.+.
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~-s~nV~I~n~~i~~gDDciaiks---------g~nI~i~n~~~~~g-hGisiGS~ 204 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE-STGVYISGATVKNQDDCIAINS---------GESISFTGGTCSGG-HGLSIGSV 204 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS-CEEEEEESCEEESSSEEEEESS---------EEEEEEESCEEESS-SEEEEEEE
T ss_pred EEEEEECCCcccccCCCCCcEEecC-CCeEEEEeCEEEcCCCEEEEeC---------CeEEEEEeEEEECC-cCceEccC
Confidence 99999873 57888877 999999999998765 699987 18999999999986 79999885
Q ss_pred cC-CCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccCcceEEEEec---------C
Q 013309 313 QG-GSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSATEEAIKFACS---------D 382 (445)
Q Consensus 313 ~g-~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~~~~~~i~~~---------~ 382 (445)
.+ ..+.++||+|+|+++.+..+++.|+.+.. ..+.++||+|+||++.....+++.|... +
T Consensus 205 g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 274 (336)
T 1nhc_A 205 GGRDDNTVKNVTISDSTVSNSANGVRIKTIYK----------ETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTP 274 (336)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred ccccCCCEEEEEEEeeEEECCCcEEEEEEECC----------CCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCC
Confidence 32 34789999999999999999999998521 2368999999999999887667777531 1
Q ss_pred --CCCeeCeEEEeEEEEecC-CCccc-----eeeeeeeeccc---ceecCCCccCCCCCc
Q 013309 383 --DSPCEGLFLEDVQLVSHS-GGIAK-----SFCWEAYGSSV---GQVEPPPCFACSEGL 431 (445)
Q Consensus 383 --~~~~~~i~~~nv~i~~~~-~~~~~-----~~c~n~~~~~~---~~~~p~~c~~~~~~~ 431 (445)
..+++||+|+||+.+... ..+.. ..|+|+...-. +...++.|.+.+.|+
T Consensus 275 ~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~~~~c~ni~~~nv~i~~~~~~~~C~n~~~g~ 334 (336)
T 1nhc_A 275 STGIPITDVTVDGVTGTLEDDATQVYILCGDGSCSDWTWSGVDLSGGKTSDKCENVPSGA 334 (336)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCEEEEEECCTTCEEEEEEEEEEEESSBCCSCCBSCCTTC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEcCCCcEecEEEEeEEEEcCCCCcccCCCCCCc
Confidence 357999999999998876 22222 33555554332 222346788877554
No 26
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.85 E-value=1.5e-18 Score=173.73 Aligned_cols=221 Identities=17% Similarity=0.219 Sum_probs=171.7
Q ss_pred CCCeeEeEeeEEECCCC-------cCCcCC----------CCccccEEEeceeeEEEEeceEEecCCchhhccccccCCC
Q 013309 110 KSRLTLEISGTIVAPKD-------PDVWKG----------LNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTT 172 (445)
Q Consensus 110 ~s~v~l~~~G~i~~~~~-------~~~~~~----------~~~~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~ 172 (445)
.++++|.+.|+|..... ...|.. .....++.+.+++|++|+|.-..+.. .|
T Consensus 108 ~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp---~~--------- 175 (376)
T 1bhe_A 108 TTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP---NF--------- 175 (376)
T ss_dssp CBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS---SC---------
T ss_pred CEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC---cE---------
Confidence 67888988888876543 223431 11345789999999999995444322 23
Q ss_pred CCCCCCCeEEEEEeecceEEeceEEEcC----CCceeEEEceecEEEEeEEEECCCCCCCCCceeee------ceecEEE
Q 013309 173 NPCRHAPTAITFHKCKNLKVQNLRVVNS----QQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHIS------ASRGVEV 242 (445)
Q Consensus 173 ~~~~~rp~~i~~~~~~nv~I~~v~i~ns----~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~------~s~nv~I 242 (445)
.+.+..|+|++|++++|.++ ...++++..|++|+|+|+.|.+. .|+|.+. .|+||+|
T Consensus 176 --------~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~g-----DDcIaiks~~~~~~s~nI~I 242 (376)
T 1bhe_A 176 --------HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATG-----DDNVAIKAYKGRAETRNISI 242 (376)
T ss_dssp --------SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECS-----SCSEEEEECTTSCCEEEEEE
T ss_pred --------EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecC-----CCeEEEcccCCCCCceEEEE
Confidence 37889999999999999985 35689999999999999999974 5789988 5999999
Q ss_pred EeeEEecCCccEEEeC---CceeEEEEeeEEcCC-ceEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEecC----
Q 013309 243 KNSIVGTGDDCISIVG---NSSLIRIRNFACGPG-HGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQG---- 314 (445)
Q Consensus 243 ~n~~i~~gdD~i~i~~---~~~ni~I~n~~~~~~-~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g---- 314 (445)
+||.+..+. +|++++ +.+||+|+||++.++ +|+.|++.. ...+.++||+|+|++|.+..++|.|.....
T Consensus 243 ~n~~~~~gh-GisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~--g~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~ 319 (376)
T 1bhe_A 243 LHNDFGTGH-GMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDK--SAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEG 319 (376)
T ss_dssp EEEEECSSS-CEEEEEEESSEEEEEEEEEEEESCSEEEEEECCT--TTCCEEEEEEEEEEEEESCSEEEEEETTSSCCCC
T ss_pred EeeEEEccc-cEEeccCCccEeeEEEEeeEEeCCCcEEEEEEec--CCCceEeeEEEEeEEEeCCCceEEEEeeccCCCC
Confidence 999999865 588875 579999999999876 599999742 246789999999999999999998874321
Q ss_pred -CCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEcc
Q 013309 315 -GSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSA 371 (445)
Q Consensus 315 -~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~ 371 (445)
..+.++||+|+||+.+... ++.+. +. +..+++||+|+||+++..
T Consensus 320 ~~~~~i~ni~~~ni~gt~~~-~~~l~---g~---------~~~~~~~I~l~nv~l~~~ 364 (376)
T 1bhe_A 320 SNVPDWSDITFKDVTSETKG-VVVLN---GE---------NAKKPIEVTMKNVKLTSD 364 (376)
T ss_dssp CCCCEEEEEEEEEEEECSCC-EEEEE---CT---------TCSSCEEEEEEEEECCTT
T ss_pred CcCcEEEEEEEEEEEEEecc-eEEEE---eC---------CCCCeeeEEEEeEEEecC
Confidence 1357999999999998754 55554 22 123578999999998754
No 27
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.84 E-value=6.6e-18 Score=171.17 Aligned_cols=169 Identities=14% Similarity=0.199 Sum_probs=144.4
Q ss_pred eeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEec----CCccEEEeCCceeEEEEeeEEcCCc-eEEE
Q 013309 204 HIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGT----GDDCISIVGNSSLIRIRNFACGPGH-GISI 278 (445)
Q Consensus 204 ~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~----gdD~i~i~~~~~ni~I~n~~~~~~~-gi~i 278 (445)
.+++..|+|++|++++|.+.. ..+|++..|+||+|+|++|.+ +.|+|.+.+ +||+|+||++..++ +|+|
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp----~~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Iai 202 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAP----AFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVTV 202 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCS----SCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEEE
T ss_pred EEEEcccceEEEECeEEECCC----ceEEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEEe
Confidence 588899999999999999743 358999999999999999997 468999987 99999999998776 6999
Q ss_pred eecCCcCCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCcceE
Q 013309 279 GSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKV 358 (445)
Q Consensus 279 gs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i 358 (445)
++ ..+||+|+||++... +|++|++. +..+.++||+|+|+++.+..+++.|+.+ . ..+.+
T Consensus 203 ~s--------~~~nI~I~n~~~~~~-~GisIGS~-g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~----------g~G~v 261 (422)
T 1rmg_A 203 KS--------PANNILVESIYCNWS-GGCAMGSL-GADTDVTDIVYRNVYTWSSNQMYMIKSN-G----------GSGTV 261 (422)
T ss_dssp EE--------EEEEEEEEEEEEESS-SEEEEEEE-CTTEEEEEEEEEEEEEESSSCSEEEEEB-B----------CCEEE
T ss_pred CC--------CCcCEEEEeEEEcCC-cceeeccc-CCCCcEEEEEEEeEEEeccceEEEEEec-C----------CCcEE
Confidence 87 579999999998876 69999985 4457899999999999999999999973 1 12589
Q ss_pred EEEEEEeEEEEccCcceEEEEec---------CCCCeeCeEEEeEEEEecC
Q 013309 359 ENITFIHIKGTSATEEAIKFACS---------DDSPCEGLFLEDVQLVSHS 400 (445)
Q Consensus 359 ~ni~f~ni~~~~~~~~~~~i~~~---------~~~~~~~i~~~nv~i~~~~ 400 (445)
+||+|+||++..... ++.+... ...+++||+|+||+.+...
T Consensus 262 ~nI~~~NI~~~~v~~-~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~ 311 (422)
T 1rmg_A 262 SNVLLENFIGHGNAY-SLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEAN 311 (422)
T ss_dssp EEEEEEEEEEEEESC-SEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESC
T ss_pred EEEEEEeEEEECccc-cEEEEeeccCCCcccCCCceEEEEEEEeEEEEecc
Confidence 999999999988765 7877642 2457999999999998754
No 28
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.80 E-value=1.6e-17 Score=164.26 Aligned_cols=221 Identities=16% Similarity=0.180 Sum_probs=169.1
Q ss_pred CCCeeEeEe--eEEECCCCcCCcCCC-----C-ccc-cEEE-e-ceeeEEEEeceEEecCCchhhccccccCCCCCCCCC
Q 013309 110 KSRLTLEIS--GTIVAPKDPDVWKGL-----N-RRR-WLYF-N-RVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHA 178 (445)
Q Consensus 110 ~s~v~l~~~--G~i~~~~~~~~~~~~-----~-~~~-~i~~-~-~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~r 178 (445)
.++++|..+ |+|.... ...|... . .++ ++.+ . .++|++|+|..+.+.. .|
T Consensus 68 ~~ni~I~G~~~G~IdG~G-~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp---~~--------------- 128 (349)
T 1hg8_A 68 GSNITITGASGHVIDGNG-QAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWP---VH--------------- 128 (349)
T ss_dssp EESCEEEECTTCEEECCG-GGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCS---SE---------------
T ss_pred CccEEEEecCCCEEcCCc-chhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCC---Cc---------------
Confidence 368888884 7776532 2344421 1 233 6777 6 6779999996554432 23
Q ss_pred CeEEEEEeecceEEeceEEEcCC----------------CceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEE
Q 013309 179 PTAITFHKCKNLKVQNLRVVNSQ----------------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEV 242 (445)
Q Consensus 179 p~~i~~~~~~nv~I~~v~i~ns~----------------~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I 242 (445)
.+.+.+|+|++|++++|.+++ ..++++..|++|+|+|+.|.+ ..|+|.+.+++||+|
T Consensus 129 --~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i 201 (349)
T 1hg8_A 129 --CFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDCVAVTSGTNIVV 201 (349)
T ss_dssp --EEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCSEEESSEEEEEE
T ss_pred --eEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCeEEeeCCeEEEE
Confidence 489999999999999999742 457999999999999999997 458999999999999
Q ss_pred EeeEEecCCccEEEeC-------CceeEEEEeeEEcCC-ceEEEeecCCcCCCccEEeEEEEcEEEeCCc-ceEEEEEec
Q 013309 243 KNSIVGTGDDCISIVG-------NSSLIRIRNFACGPG-HGISIGSLGKSNSSVRIHDIMVYGALISNTQ-NGVRIKTWQ 313 (445)
Q Consensus 243 ~n~~i~~gdD~i~i~~-------~~~ni~I~n~~~~~~-~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~-~gi~i~~~~ 313 (445)
+||++..++ +|++++ +.+||+|+||++.+. +|+.|++.. ...+.++||+|+|++|.+.. ++|.|....
T Consensus 202 ~n~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y 278 (349)
T 1hg8_A 202 SNMYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNS--GATGTINNVTYQNIALTNISTYGVDVQQDY 278 (349)
T ss_dssp EEEEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEET--TCCEEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EeEEEeCCc-ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecC--CCCccccceEEEEEEEEccccccEEEEeec
Confidence 999999876 599965 279999999999865 589998842 23578999999999999986 699887642
Q ss_pred ------C---CCceeeeEEEEeEEEecCC--ccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccC
Q 013309 314 ------G---GSGSATNIQFLDVLMKNVS--NPIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSAT 372 (445)
Q Consensus 314 ------g---~~g~v~ni~~~ni~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~ 372 (445)
+ ....++||+|+||+.+... .++.+. |. ..+++||+|+||+++...
T Consensus 279 ~~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~---c~----------~~~c~ni~~~nv~i~~~~ 335 (349)
T 1hg8_A 279 LNGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFIL---CG----------DGSCSGFTFSGNAITGGG 335 (349)
T ss_dssp CSSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEE---CC----------SSCEEEEEEESCEEECCS
T ss_pred cCCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEE---eC----------CCcCcCEEEEeEEEEcCC
Confidence 1 1247999999999997654 355553 21 147999999999998653
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.79 E-value=1e-17 Score=164.65 Aligned_cols=188 Identities=11% Similarity=0.114 Sum_probs=152.5
Q ss_pred EEEEEeecceEEece--EEEcCC--Cc-------------eeEEEceecEEEEeEEEECCCCCCCCCceeeeceec-EEE
Q 013309 181 AITFHKCKNLKVQNL--RVVNSQ--QM-------------HIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRG-VEV 242 (445)
Q Consensus 181 ~i~~~~~~nv~I~~v--~i~ns~--~~-------------~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~n-v~I 242 (445)
++.+. ++|++|.|- +|.... .| .+.+..|+ ++|+++++.+++ ..++++..|+| |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp----~~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSP----AQAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCS----SCCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCC----cceEEEEccCCeEEE
Confidence 46665 699999993 554221 12 37888999 999999999854 34699999999 999
Q ss_pred EeeEEecC----------CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEE
Q 013309 243 KNSIVGTG----------DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKT 311 (445)
Q Consensus 243 ~n~~i~~g----------dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~ 311 (445)
+|++|.+. .|+|.+ .++||+|+||++..++ +++|++ | +||+|+||++... +||.|.+
T Consensus 134 ~~v~I~~~~~d~~~~~~NtDGidi--~s~nV~I~n~~i~~gDDcIaiks-g--------~nI~i~n~~~~~g-hGisIGS 201 (335)
T 1k5c_A 134 DGITVDDFAGDTKNLGHNTDGFDV--SANNVTIQNCIVKNQDDCIAIND-G--------NNIRFENNQCSGG-HGISIGS 201 (335)
T ss_dssp ESCEEECGGGGGGGCCCSCCSEEE--ECSSEEEESCEEESSSCSEEEEE-E--------EEEEEESCEEESS-CCEEEEE
T ss_pred EEEEEECCCCcccccCCCCCeEcc--cCCeEEEEeeEEEcCCCEEEeeC-C--------eeEEEEEEEEECC-ccCeEee
Confidence 99999873 477888 4999999999998765 699988 1 8999999999986 7999998
Q ss_pred ecCCCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCc-ceEEEEEEEeEEEEccCcceEEEEec-------C-
Q 013309 312 WQGGSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSA-VKVENITFIHIKGTSATEEAIKFACS-------D- 382 (445)
Q Consensus 312 ~~g~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~-~~i~ni~f~ni~~~~~~~~~~~i~~~-------~- 382 (445)
.. ..+.|+||+|+|+++.+...+++|+.+.. .. +.++||+|+||++.....+++.|... +
T Consensus 202 ~g-~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~ 270 (335)
T 1k5c_A 202 IA-TGKHVSNVVIKGNTVTRSMYGVRIKAQRT----------ATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPG 270 (335)
T ss_dssp EC-TTCEEEEEEEESCEEEEEEEEEEEEEETT----------CCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCC
T ss_pred cc-CCCCEEEEEEEeeEEECCCceEEEEEeCC----------CCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCC
Confidence 63 25799999999999999999999997632 22 58999999999999876558888742 2
Q ss_pred -CCCeeCeEEEeEEEE
Q 013309 383 -DSPCEGLFLEDVQLV 397 (445)
Q Consensus 383 -~~~~~~i~~~nv~i~ 397 (445)
..+++||+|+||+++
T Consensus 271 ~~~~i~nI~~~nI~~~ 286 (335)
T 1k5c_A 271 TGAPFSDVNFTGGATT 286 (335)
T ss_dssp SSSCEEEEEECSSCEE
T ss_pred CCceEEEEEEEEEEEe
Confidence 357999999999954
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.76 E-value=6.5e-17 Score=168.19 Aligned_cols=236 Identities=12% Similarity=0.068 Sum_probs=169.6
Q ss_pred CcE-EEEcCCcEEEeeeeeecCCCCCCeeEeEeeEEECCCCcCCcC-------CCC-ccccEEEe------ceeeEEEEe
Q 013309 87 RTK-IVFSAGYTFLIHPIDISGPCKSRLTLEISGTIVAPKDPDVWK-------GLN-RRRWLYFN------RVNHLTVQG 151 (445)
Q Consensus 87 g~~-v~~P~G~~Yl~~~l~l~~~~~s~v~l~~~G~i~~~~~~~~~~-------~~~-~~~~i~~~------~~~nv~I~G 151 (445)
+-+ |++++| .++.+++.+.+ ..+++|...|+|..... ..|. ... ....+.+. +|+|+.|+|
T Consensus 264 nvt~L~L~~G-A~l~g~i~~~~--~~nv~ItG~GtIDG~G~-~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~G 339 (574)
T 1ogo_X 264 NTYWVYLAPG-AYVKGAIEYFT--KQNFYATGHGILSGENY-VYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVG 339 (574)
T ss_dssp TCCEEEECTT-EEEESCEEECC--SSCEEEESSCEEECTTS-CTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEES
T ss_pred CCceEEecCC-cEEEccEEEeC--ceeEEEEeCEEEeCCCc-ccccccccccccccCCcceEEEEeccccCCceeEEEEC
Confidence 466 999999 89999999976 68999998899876431 1121 111 11223333 899999999
Q ss_pred ceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecce--EEeceEEEcCC---CceeEEEceecEEEEeEEEECCCCC
Q 013309 152 GGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNL--KVQNLRVVNSQ---QMHIAFTNCLRVVISNLEVIAPAES 226 (445)
Q Consensus 152 ~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv--~I~~v~i~ns~---~~~i~~~~~~nv~I~n~~I~~~~~~ 226 (445)
..+.+. .+|. +.+.+|+|| +|+++++.+++ ..++++. +||+|+||+|.+.
T Consensus 340 iti~NS---p~w~-----------------i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~g--- 394 (574)
T 1ogo_X 340 PTINAP---PFNT-----------------MDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVN--- 394 (574)
T ss_dssp CEEECC---SSCS-----------------EEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEES---
T ss_pred eEEECC---CCcE-----------------EeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECC---
Confidence 777663 2343 788999999 99999998754 4578887 9999999999984
Q ss_pred CCCCceeeeceecEEEEeeEEecCCc-c-EEEeC---CceeEEEEeeEEcCCc---------eEEEeecCCcC------C
Q 013309 227 PNTDGIHISASRGVEVKNSIVGTGDD-C-ISIVG---NSSLIRIRNFACGPGH---------GISIGSLGKSN------S 286 (445)
Q Consensus 227 ~n~DGi~~~~s~nv~I~n~~i~~gdD-~-i~i~~---~~~ni~I~n~~~~~~~---------gi~igs~g~~~------~ 286 (445)
.|+|.+.+ +||+|+||.+..+.. + |.+++ ..+||+|+||++.+.+ +..||+...+. .
T Consensus 395 --DDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~ 471 (574)
T 1ogo_X 395 --DDAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDS 471 (574)
T ss_dssp --SCSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEE
T ss_pred --CCEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCC
Confidence 57897776 999999999998653 4 88875 4799999999996432 34445432111 1
Q ss_pred CccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEec------CCc-cEEEEeeeCCCCCCCCCCCCcceEE
Q 013309 287 SVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKN------VSN-PIIIDQYYCDSPVPCANQTSAVKVE 359 (445)
Q Consensus 287 ~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~------~~~-~i~i~~~~~~~~~~~~~~~~~~~i~ 359 (445)
...+ ||+|+|+++.+...++ |...+ .+.++||+|+||++++ ... +..+.. .. ..++
T Consensus 472 g~gV-NI~f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G------------~~-~~v~ 534 (574)
T 1ogo_X 472 RKSI-SMTVSNVVCEGLCPSL-FRITP--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPA------------AS-GLTM 534 (574)
T ss_dssp EEEE-EEEEEEEEECSSBCEE-EEECC--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECC------------CT-TCCE
T ss_pred CceE-EEEEEeEEEEceeEee-EEECC--CCCEEEEEEEeEEEeCccccccccccceeEec------------CC-Cccc
Confidence 1228 9999999999988875 44433 3579999999999986 211 111111 01 4689
Q ss_pred EEEEEeEEEEcc
Q 013309 360 NITFIHIKGTSA 371 (445)
Q Consensus 360 ni~f~ni~~~~~ 371 (445)
||+|+||++.+.
T Consensus 535 nI~~~NV~i~g~ 546 (574)
T 1ogo_X 535 GLAISAWTIGGQ 546 (574)
T ss_dssp EEEEEEEEETTE
T ss_pred eEEEEeEEEeCE
Confidence 999999998654
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.73 E-value=1.9e-16 Score=164.73 Aligned_cols=250 Identities=12% Similarity=0.130 Sum_probs=170.3
Q ss_pred CcE-EEEcCCcEEEeeeeeecCCCCCCeeEeEeeEEECCCCc------CCcCCC--CccccEEE------eceeeEEEEe
Q 013309 87 RTK-IVFSAGYTFLIHPIDISGPCKSRLTLEISGTIVAPKDP------DVWKGL--NRRRWLYF------NRVNHLTVQG 151 (445)
Q Consensus 87 g~~-v~~P~G~~Yl~~~l~l~~~~~s~v~l~~~G~i~~~~~~------~~~~~~--~~~~~i~~------~~~~nv~I~G 151 (445)
+.+ |++++| .++.+++.+.+ ...+++|...|+|...... ..|... .....+.+ .+++|+.|+|
T Consensus 222 ~~~~L~l~~G-A~L~gs~~~~~-~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~G 299 (549)
T 1x0c_A 222 SVTWVYFAPG-AYVKGAVEFLS-TASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNG 299 (549)
T ss_dssp TCCEEEECTT-EEEESCEEECC-CSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEES
T ss_pred CCCeEecCCC-CEEEEEEEEec-CceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEEC
Confidence 567 999999 99999888852 1568999888998876421 112110 01122334 8999999999
Q ss_pred ceEEecCCchhhccccccCCCCCCCCCCeEEEEE-ee-cc--eEEeceEEEcCC---CceeEEEceecEEEEeEEEECCC
Q 013309 152 GGTINGMGQEWWSRSCKINTTNPCRHAPTAITFH-KC-KN--LKVQNLRVVNSQ---QMHIAFTNCLRVVISNLEVIAPA 224 (445)
Q Consensus 152 ~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~-~~-~n--v~I~~v~i~ns~---~~~i~~~~~~nv~I~n~~I~~~~ 224 (445)
..+.+.. +|. +.+. .| ++ ++|+++++.++. ..++++. +||+|+||+|.+.
T Consensus 300 iti~Nsp---~w~-----------------i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~g- 356 (549)
T 1x0c_A 300 VTVSAPP---FNS-----------------MDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTD- 356 (549)
T ss_dssp CEEECCS---SCS-----------------EEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEES-
T ss_pred cEEECCC---cee-----------------EEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCC-
Confidence 7665542 443 5644 45 69 999999998643 4578887 9999999999984
Q ss_pred CCCCCCceeeeceecEEEEeeEEecCC-cc-EEEeC---CceeEEEEeeEEcCCc-------eEEEeec-----C---Cc
Q 013309 225 ESPNTDGIHISASRGVEVKNSIVGTGD-DC-ISIVG---NSSLIRIRNFACGPGH-------GISIGSL-----G---KS 284 (445)
Q Consensus 225 ~~~n~DGi~~~~s~nv~I~n~~i~~gd-D~-i~i~~---~~~ni~I~n~~~~~~~-------gi~igs~-----g---~~ 284 (445)
.|+|.+.+ +||+|+||.+..+. .+ |.+++ ..+||+|+||++.+.. |..|++. + ..
T Consensus 357 ----DDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~ 431 (549)
T 1x0c_A 357 ----DDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLS 431 (549)
T ss_dssp ----SCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCC
T ss_pred ----CCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccC
Confidence 56888887 99999999998754 35 78874 4799999999996543 3225441 1 01
Q ss_pred -CCCccEEeEEEEcEEEeCCc-ceEEEEEecCC-CceeeeEEEEeEEEecCC-----ccEEEEeeeCCCCCCCCCCCCcc
Q 013309 285 -NSSVRIHDIMVYGALISNTQ-NGVRIKTWQGG-SGSATNIQFLDVLMKNVS-----NPIIIDQYYCDSPVPCANQTSAV 356 (445)
Q Consensus 285 -~~~~~v~nv~i~n~~~~~~~-~gi~i~~~~g~-~g~v~ni~~~ni~~~~~~-----~~i~i~~~~~~~~~~~~~~~~~~ 356 (445)
...+.++||+|+|++|.+.. +|+.+....+. .+.++||+|+||++++.. ....+...|... .|. ...
T Consensus 432 ~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~--~~~---~~~ 506 (549)
T 1x0c_A 432 SNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDL--NNG---KQI 506 (549)
T ss_dssp SCCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBT--TTC---CBC
T ss_pred cCCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeCCCcc--ccc---cce
Confidence 12568999999999998875 55443221122 236999999999998765 212222222110 011 224
Q ss_pred eEEEEEEEeEEEEcc
Q 013309 357 KVENITFIHIKGTSA 371 (445)
Q Consensus 357 ~i~ni~f~ni~~~~~ 371 (445)
.++||+|+||++.+.
T Consensus 507 ~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 507 TVTDFSIEGFTVGNT 521 (549)
T ss_dssp CEEEEEEEEEEETTE
T ss_pred eeeeEEEEeEEEeCe
Confidence 799999999998654
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.58 E-value=5.2e-14 Score=138.17 Aligned_cols=229 Identities=11% Similarity=0.155 Sum_probs=156.4
Q ss_pred CCCCCeeEEeecc----cccCCCCCccHHHHHHHHHHHcC------CCCCcEEEEcCCcEEEe-eeeeecCCCCCCeeEe
Q 013309 48 RSKSKRVIFVGDF----GAKGDGFNDDTEAFANAWKKACS------FPARTKIVFSAGYTFLI-HPIDISGPCKSRLTLE 116 (445)
Q Consensus 48 ~~~~~~~~~v~df----Ga~gdg~tDdT~Aiq~Ai~~a~~------~~gg~~v~~P~G~~Yl~-~~l~l~~~~~s~v~l~ 116 (445)
+.....++||++| +|+||+.+|++++|+++|+...+ +..|++|++|+| +|.+ +++.+. ++.++|.
T Consensus 8 ~~~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G-~Y~l~g~ivId---kp~LtL~ 83 (410)
T 2inu_A 8 PLNSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPG-DYDLHTQVVVD---VSYLTIA 83 (410)
T ss_dssp ----CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSE-EEEECSCEEEC---CTTEEEE
T ss_pred ccccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCC-eeccCCcEEEe---cCcEEEE
Confidence 3445789999999 89999999999999999987553 344799999999 9975 788883 3448888
Q ss_pred Eee--E----EECCCCcCCcCCC-C------------ccccEEEec-----eeeEEEEeceEEecC-----Cchhhcccc
Q 013309 117 ISG--T----IVAPKDPDVWKGL-N------------RRRWLYFNR-----VNHLTVQGGGTINGM-----GQEWWSRSC 167 (445)
Q Consensus 117 ~~G--~----i~~~~~~~~~~~~-~------------~~~~i~~~~-----~~nv~I~G~G~IDG~-----G~~~w~~~~ 167 (445)
..+ . |......+.|... + ....|.+.. .++|++.| =+|+|- |...
T Consensus 84 G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~s~----- 157 (410)
T 2inu_A 84 GFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKNSY----- 157 (410)
T ss_dssp CSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTTSC-----
T ss_pred ecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCCCc-----
Confidence 764 2 2211111232210 1 112222222 24455554 233333 3211
Q ss_pred ccCCCCCCCCCCeEEEEEe-ecceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCCCCCCCceeeec-eecEEEEee
Q 013309 168 KINTTNPCRHAPTAITFHK-CKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISA-SRGVEVKNS 245 (445)
Q Consensus 168 ~~~~~~~~~~rp~~i~~~~-~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~-s~nv~I~n~ 245 (445)
......|.+.. +++++|++..|.+. .++|.+..+++.+|++..|.. ...||++++ ++...|+++
T Consensus 158 --------~~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N 223 (410)
T 2inu_A 158 --------HNGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGN 223 (410)
T ss_dssp --------CCSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESC
T ss_pred --------ccCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecc
Confidence 12234677775 88899999999886 689999999999999999985 456888888 888899999
Q ss_pred EEecCCcc--EEEeCCceeEEEEeeEE-cCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEE
Q 013309 246 IVGTGDDC--ISIVGNSSLIRIRNFAC-GPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIK 310 (445)
Q Consensus 246 ~i~~gdD~--i~i~~~~~ni~I~n~~~-~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~ 310 (445)
.+..++|+ |.++. +++.+|+++.+ ..++ |+.+-. ..+..|+++.+.+...|+.+-
T Consensus 224 ~i~~~~dG~gIyl~n-s~~~~I~~N~i~~~~R~gIh~m~---------s~~~~i~~N~f~~~~~Gi~~M 282 (410)
T 2inu_A 224 HMGAGPDGVTLLAEN-HEGLLVTGNNLFPRGRSLIEFTG---------CNRCSVTSNRLQGFYPGMLRL 282 (410)
T ss_dssp EEECCTTSEEEEEES-EESCEEESCEECSCSSEEEEEES---------CBSCEEESCEEEESSSCSEEE
T ss_pred eeeecCCCCEEEEEe-CCCCEEECCCcccCcceEEEEEc---------cCCCEEECCEEecceeEEEEE
Confidence 99988888 76666 77888888866 4343 666632 357778888888877776654
No 33
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.49 E-value=8.1e-13 Score=134.40 Aligned_cols=159 Identities=16% Similarity=0.089 Sum_probs=120.7
Q ss_pred EeecceEEece----EEEcC----C-CceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEE
Q 013309 185 HKCKNLKVQNL----RVVNS----Q-QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCIS 255 (445)
Q Consensus 185 ~~~~nv~I~~v----~i~ns----~-~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~ 255 (445)
.+.+|++|.|- ++... . ...+.+..|+|++|+|+++.+.+ .+..|.+|.+. ..|++.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w--------~ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK--------TIFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS--------CBSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc--------eEeeceeeeee------cCCCce
Confidence 56788888876 44322 1 12477899999999999999732 12344444443 357777
Q ss_pred EeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEe-----cCCCceeeeEEEEeEEE
Q 013309 256 IVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTW-----QGGSGSATNIQFLDVLM 329 (445)
Q Consensus 256 i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~-----~g~~g~v~ni~~~ni~~ 329 (445)
+ .++||+|+||++.+++ ++ |+ .....++||+|+||+|.+ .+|++|+++ .+..|.++||+|+|++|
T Consensus 172 i--~s~nV~I~n~~I~~gddgi--Gs----~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~ 242 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGY--GL----IQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRC 242 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTC--EE----EEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeE--Ee----cccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEE
Confidence 7 5899999999998765 45 32 134578999999999999 799999988 55678999999999999
Q ss_pred ecCCccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccCcceEEEEe
Q 013309 330 KNVSNPIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSATEEAIKFAC 380 (445)
Q Consensus 330 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~~~~~~i~~ 380 (445)
+++..||.|+. ....++||+|+||++++... ++.+.+
T Consensus 243 ~nv~~~I~I~p-------------~~~~isnItfeNI~~t~~~~-aI~i~q 279 (464)
T 1h80_A 243 SKGLAAVMFGP-------------HFMKNGDVQVTNVSSVSCGS-AVRSDS 279 (464)
T ss_dssp ESSSEEEEEEC-------------TTCBCCCEEEEEEEEESSSC-SEEECC
T ss_pred ECCceeEEEeC-------------CCceEeEEEEEEEEEEccce-eEEEec
Confidence 99999999982 12468999999999998653 777653
No 34
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.47 E-value=1.2e-10 Score=120.55 Aligned_cols=221 Identities=14% Similarity=0.132 Sum_probs=141.3
Q ss_pred cccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCC-ceeEEEc-----
Q 013309 136 RRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQ-MHIAFTN----- 209 (445)
Q Consensus 136 ~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~-~~i~~~~----- 209 (445)
..++.+.+++|++|++--+.+... +++++.++.. .+++++.
T Consensus 134 P~lI~f~~c~NV~I~gVti~NSp~---------------------------------~gI~I~~~~~NDGid~DGi~fd~ 180 (609)
T 3gq8_A 134 ESNLSIRACHNVYIRDIEAVDCTL---------------------------------HGIDITCGGLDYPYLGDGTTAPN 180 (609)
T ss_dssp TCSEEEESCEEEEEEEEEEESCSS---------------------------------CSEEEECSSSSCCCCCTTCCCSS
T ss_pred ccEEEEEeeceEEEEeeEEEeCCC---------------------------------CCeEEeCCCCCccccCCCccccc
Confidence 457899999999999943322111 1222222211 3444555
Q ss_pred -eecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecC-----CccEEEeCCceeEEEEeeEEcCC-ceEEEeecC
Q 013309 210 -CLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTG-----DDCISIVGNSSLIRIRNFACGPG-HGISIGSLG 282 (445)
Q Consensus 210 -~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g-----dD~i~i~~~~~ni~I~n~~~~~~-~gi~igs~g 282 (445)
|+||+|+||+|.. ...|||.+.+|+||+|+||++... ..+|.+.++++||+|+||++.++ .|+.|++.
T Consensus 181 ~S~NV~I~Nc~I~~----tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~- 255 (609)
T 3gq8_A 181 PSENIWIENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAH- 255 (609)
T ss_dssp CCEEEEEESCEEES----CSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEEC-
T ss_pred cceeEEEEeeEEEe----cCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEec-
Confidence 8999999999976 245889998899999999999543 46888888889999999999876 48999874
Q ss_pred CcCCCccEEeEEEEcEEEeCCcc--eEEEEEecC----CCceeeeEEEEeEEEecCC-----------ccEEEEee----
Q 013309 283 KSNSSVRIHDIMVYGALISNTQN--GVRIKTWQG----GSGSATNIQFLDVLMKNVS-----------NPIIIDQY---- 341 (445)
Q Consensus 283 ~~~~~~~v~nv~i~n~~~~~~~~--gi~i~~~~g----~~g~v~ni~~~ni~~~~~~-----------~~i~i~~~---- 341 (445)
.+...++||+|+|+...+... .++.--... ......||++.|++..... +++.+...
T Consensus 256 --~~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~ 333 (609)
T 3gq8_A 256 --GDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVV 333 (609)
T ss_dssp --TTSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEE
T ss_pred --CCCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeE
Confidence 245678999999976554433 343221111 2246788888888886432 13333321
Q ss_pred ------eCCCCCCCCCCCCc----ceEEEEEEEeEEEEccCc--ceEEEEecCCCCeeCeEEEeEEEEec
Q 013309 342 ------YCDSPVPCANQTSA----VKVENITFIHIKGTSATE--EAIKFACSDDSPCEGLFLEDVQLVSH 399 (445)
Q Consensus 342 ------~~~~~~~~~~~~~~----~~i~ni~f~ni~~~~~~~--~~~~i~~~~~~~~~~i~~~nv~i~~~ 399 (445)
+.+..- ....+. ..-+||+|.+|++++-.. ..+++.|.+ ..++.++++|+++...
T Consensus 334 i~~~~~~~d~~y--~~~~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~-~~~~~v~i~n~~i~~s 400 (609)
T 3gq8_A 334 INGLTGYTDDPN--LLTETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNNS 400 (609)
T ss_dssp EEEEEEECSCTT--SCCSEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCC-CTTCCEEEEEEEEESC
T ss_pred EcCceEccCCcc--ccCCceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CcCCeEEEeccEEeec
Confidence 111110 001111 134899999999987653 367776654 3677888888887643
No 35
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.43 E-value=1.9e-10 Score=120.92 Aligned_cols=220 Identities=15% Similarity=0.133 Sum_probs=132.6
Q ss_pred cccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCC-ceeEEEc-----
Q 013309 136 RRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQ-MHIAFTN----- 209 (445)
Q Consensus 136 ~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~-~~i~~~~----- 209 (445)
..+|.+.+++|++|++--+.+... ++++|.++.. .+++++.
T Consensus 134 P~lI~f~~ckNV~I~gVti~NSp~---------------------------------~gI~I~np~~NDGid~DGi~fdi 180 (772)
T 3gqn_A 134 ESNLSIRACHNVYIRDIEAVDCTL---------------------------------HGIDITCGGLDYPYLGDGTTAPN 180 (772)
T ss_dssp TCSEEEESCEEEEEEEEEEESCSS---------------------------------CSEEEECSSSSCCCCCTTCCCSS
T ss_pred ccEEEEEeeceEEEEeEEEEeCCC---------------------------------CCEEEeCCCcCCcCCCcCccccc
Confidence 457899999999999943322111 1222322221 3444444
Q ss_pred -eecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecC-----CccEEEeCCceeEEEEeeEEcCC-ceEEEeecC
Q 013309 210 -CLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTG-----DDCISIVGNSSLIRIRNFACGPG-HGISIGSLG 282 (445)
Q Consensus 210 -~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g-----dD~i~i~~~~~ni~I~n~~~~~~-~gi~igs~g 282 (445)
|+||+|+||.|.+ ...|||.+.+|+||+|+||++... ..+|.++++++||+|+||++.++ .|+.|++.
T Consensus 181 ~S~NV~I~Nc~I~n----tGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~- 255 (772)
T 3gqn_A 181 PSENIWIENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAH- 255 (772)
T ss_dssp CCEEEEEESCEEES----CSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCC-
T ss_pred ccceEEEEeeEEEe----cCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEe-
Confidence 8888888888875 245788888888888888888443 46788887788888888888765 47888864
Q ss_pred CcCCCccEEeEEEEcEEEeCCcc--eEEEEEecC----CCceeeeEEEEeEEEecCC-----------ccEEEEee----
Q 013309 283 KSNSSVRIHDIMVYGALISNTQN--GVRIKTWQG----GSGSATNIQFLDVLMKNVS-----------NPIIIDQY---- 341 (445)
Q Consensus 283 ~~~~~~~v~nv~i~n~~~~~~~~--gi~i~~~~g----~~g~v~ni~~~ni~~~~~~-----------~~i~i~~~---- 341 (445)
.+.+.++||+|.|+....... +++.--... .+-...||++.|++..... .++.+...
T Consensus 256 --~~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~ 333 (772)
T 3gqn_A 256 --GDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVV 333 (772)
T ss_dssp --TTSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEE
T ss_pred --CCCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcE
Confidence 345678888888655443222 333111110 1125678888887775431 13333221
Q ss_pred ------eCCCCCCCCCCCCc----ceEEEEEEEeEEEEccCc--ceEEEEecCCCCeeCeEEEeEEEEe
Q 013309 342 ------YCDSPVPCANQTSA----VKVENITFIHIKGTSATE--EAIKFACSDDSPCEGLFLEDVQLVS 398 (445)
Q Consensus 342 ------~~~~~~~~~~~~~~----~~i~ni~f~ni~~~~~~~--~~~~i~~~~~~~~~~i~~~nv~i~~ 398 (445)
+.+..- ....+. ..-+||+|.||++++-.. ..+++.|.+ ..++.++++|+++..
T Consensus 334 i~~~~~igd~~y--~~~~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i~v~gg~-~~~~~v~i~n~~i~~ 399 (772)
T 3gqn_A 334 INGLTGYTDDPN--LLTETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNN 399 (772)
T ss_dssp EEEEEEECSCTT--SCCSEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCST-TCCEEEEEEEEEEES
T ss_pred ecCceeccCccc--ccCCceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CCCCeEEEeccEEee
Confidence 111110 000111 134789999999887643 356666654 357777777777754
No 36
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.40 E-value=4.4e-11 Score=119.61 Aligned_cols=110 Identities=9% Similarity=0.082 Sum_probs=92.3
Q ss_pred EEEEEeecceEEeceEEEcCCCceeEEEc-eecEEEEeEEEECCCCCCCCCceee--------eceecEEEEeeEEec-C
Q 013309 181 AITFHKCKNLKVQNLRVVNSQQMHIAFTN-CLRVVISNLEVIAPAESPNTDGIHI--------SASRGVEVKNSIVGT-G 250 (445)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~-~~nv~I~n~~I~~~~~~~n~DGi~~--------~~s~nv~I~n~~i~~-g 250 (445)
.|.+..|++.+|++.++.+....++++.. +++++|+++.+.. +.+|+.+ ..+++++|+++.+.. .
T Consensus 174 GI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~-----~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~ 248 (377)
T 2pyg_A 174 GFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG-----NGSSGLVVQRGLEDLALPSNILIDGGAYYDNA 248 (377)
T ss_dssp SEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES-----CSSCSEEEECCSSCCCCCEEEEEESCEEESCS
T ss_pred ceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC-----ccCceEEEeccccCCCCCccEEEECCEEEcCc
Confidence 57788999999999988888889999888 9999999999987 4567776 678999999999875 4
Q ss_pred CccEEEeCCceeEEEEeeEEcC--CceEEEeecCCcCCCccEEeEEEEcEEEeCCcc
Q 013309 251 DDCISIVGNSSLIRIRNFACGP--GHGISIGSLGKSNSSVRIHDIMVYGALISNTQN 305 (445)
Q Consensus 251 dD~i~i~~~~~ni~I~n~~~~~--~~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~ 305 (445)
..++.+.. .++++|+||++.+ ..||.+.. .++++|+|++|.+...
T Consensus 249 ~~Gi~~~~-~~~v~i~~N~i~~~~~~GI~i~g---------~~~~~i~~N~i~~n~~ 295 (377)
T 2pyg_A 249 REGVLLKM-TSDITLQNADIHGNGSSGVRVYG---------AQDVQILDNQIHDNAQ 295 (377)
T ss_dssp SCSEEEEE-EEEEEEESCEEESCSSCSEEEEE---------EEEEEEESCEEESCCS
T ss_pred cCceEecc-ccCeEEECCEEECCCCceEEEec---------CCCcEEECcEEECCcc
Confidence 66788876 8999999999976 46888853 6899999999987644
No 37
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.29 E-value=5.9e-11 Score=122.19 Aligned_cols=231 Identities=13% Similarity=0.011 Sum_probs=150.3
Q ss_pred CCCeeEeEeeEEECCCCcCCcCCCC---ccccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEE--
Q 013309 110 KSRLTLEISGTIVAPKDPDVWKGLN---RRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITF-- 184 (445)
Q Consensus 110 ~s~v~l~~~G~i~~~~~~~~~~~~~---~~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~-- 184 (445)
.++++|.+.|+|-... ...|+... .++.+.+.+++ |+|--+.+. ...| .+.+
T Consensus 149 ~~NItItG~GtIDGqG-~~wW~~~~~~~~RP~l~f~~c~---I~GITi~NS--DP~w-----------------~I~iG~ 205 (600)
T 2x6w_A 149 LENCHIYGHGVVDFGG-YEFGASSQLRNGVAFGRSYNCS---VTGITFQNG--DVTW-----------------AITLGW 205 (600)
T ss_dssp EEEEEEESSCEEECTT-CCCSSTTCCEEEEECCSEEEEE---EESCEEESC--CCSC-----------------SEEECB
T ss_pred ceeEEEecceeeeCCc-cccccccccCCCCCEEEEeeeE---EeCeEEECC--CCcc-----------------EEEeCC
Confidence 4677788778887643 23443211 12335555554 666433332 0224 3788
Q ss_pred -EeecceEEeceE----EEcCC-CceeEEEceecEEEEeEEEECCCCCCCCCceee-ece--ecEEEEeeEEecCCccEE
Q 013309 185 -HKCKNLKVQNLR----VVNSQ-QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHI-SAS--RGVEVKNSIVGTGDDCIS 255 (445)
Q Consensus 185 -~~~~nv~I~~v~----i~ns~-~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~-~~s--~nv~I~n~~i~~gdD~i~ 255 (445)
..|+||+|++++ |.+++ ..++ |+|+|+.|.+ ..|+|.+ .+. .++.++ .+..+..+|+
T Consensus 206 ~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~t-----GDDCIAI~KSGs~~ni~~e--~~~~GHgGIS 271 (600)
T 2x6w_A 206 NGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSG-----VESCYFSMSSSFARNIACS--VQLHQHDTFY 271 (600)
T ss_dssp TTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEE-----EESCEEECCCTTHHHHEEE--EEECSSSEEE
T ss_pred CCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEec-----CCcEEEEecCCCcCCeEEE--EEcCCCCcEE
Confidence 899999999999 76633 4455 8899999987 3578999 653 346777 5667778999
Q ss_pred EeC----CceeEEEEeeEEcCCceEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEec--CCCceeeeEEEEeEEE
Q 013309 256 IVG----NSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQ--GGSGSATNIQFLDVLM 329 (445)
Q Consensus 256 i~~----~~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~--g~~g~v~ni~~~ni~~ 329 (445)
+++ +.+||+|+| ++.... ...+.++||+|+|++|.+...++.+...+ ...+.|+||+|+||+.
T Consensus 272 IGSe~~ggV~NV~V~N-rIKt~~----------G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItg 340 (600)
T 2x6w_A 272 RGSTVNGYCRGAYVVM-HAAEAA----------GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIV 340 (600)
T ss_dssp ESCEEEEESEEEEEEE-CGGGCT----------TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEE
T ss_pred ecccccCcEEEEEEEE-EEEeec----------CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEE
Confidence 987 368888888 433221 13578999999999999998888887642 2346899999999999
Q ss_pred ecCCc-------cEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEEEccCc--ceEEEEecCCCCeeCeEEEeEE
Q 013309 330 KNVSN-------PIIIDQYYCDSPVPCANQTSAVKVENITFIHIKGTSATE--EAIKFACSDDSPCEGLFLEDVQ 395 (445)
Q Consensus 330 ~~~~~-------~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~~~~~~--~~~~i~~~~~~~~~~i~~~nv~ 395 (445)
+.... +..|... ..+|. ......|++|+|+|++...... ....+. -.+.+++|+|.+=.
T Consensus 341 Tsas~aav~~~~g~~i~g~----p~~~~-~~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~ 408 (600)
T 2x6w_A 341 SIGERAAFSAPFGAFIDIG----PDNSG-ASNVQDIQRVLVTGNSFYAPANITDSAAIT--LRANLNGCTFIANN 408 (600)
T ss_dssp EECSCCTTSSSCEEEEEEC----CCTTC-CSSSCCEEEEEEESCEEECCTTCSSEEEEE--ECSCBSCEEEESCE
T ss_pred EeccccccccccceEEEec----Ccccc-cccccceeEEEEeceEEEcCCccCCCccee--eeccccceEEecCc
Confidence 86432 2455442 11122 1234689999999999865432 111111 23457788887654
No 38
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.22 E-value=9.1e-11 Score=123.29 Aligned_cols=93 Identities=24% Similarity=0.340 Sum_probs=70.3
Q ss_pred CCCeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEee-eeeecCCCCCCeeEeEee--EEECCCC
Q 013309 50 KSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIH-PIDISGPCKSRLTLEISG--TIVAPKD 126 (445)
Q Consensus 50 ~~~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~-~l~l~~~~~s~v~l~~~G--~i~~~~~ 126 (445)
+....++|+||||+|||++|||+|||+||++| + ++.+|+||+| +|++. +|.+ +++++|.+++ +|+.. +
T Consensus 396 ~~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa-~--~g~~v~~P~G-~Y~vt~Ti~i----p~~~~ivG~~~~~I~~~-G 466 (758)
T 3eqn_A 396 APSDFVSVRSQGAKGDGHTDDTQAIKNVFAKY-A--GCKIIFFDAG-TYIVTDTIQI----PAGTQIVGEVWSVIMGT-G 466 (758)
T ss_dssp CGGGEEETTTTTCCCEEEEECHHHHHHHHHHH-T--TTSEEECCSE-EEEESSCEEE----CTTCEEECCSSEEEEEC-S
T ss_pred cccceEEeeeccccCCCCchhHHHHHHHHHHh-c--CCCEEEECCC-EeEECCeEEc----CCCCEEEecccceEecC-C
Confidence 44679999999999999999999999999954 3 3689999999 89885 8999 8999999885 55543 2
Q ss_pred cCCcCC-CCccccEEE---eceeeEEEEec
Q 013309 127 PDVWKG-LNRRRWLYF---NRVNHLTVQGG 152 (445)
Q Consensus 127 ~~~~~~-~~~~~~i~~---~~~~nv~I~G~ 152 (445)
..|.. ...++++.. .....+.|.|.
T Consensus 467 -~~F~d~~~P~pvv~VG~~gd~G~veisdl 495 (758)
T 3eqn_A 467 -SKFTDYNNPQPVIQVGAPGSSGVVEITDM 495 (758)
T ss_dssp -GGGCCTTSCEEEEEESCTTCBSCEEEESC
T ss_pred -ccccCCCCCeeeEEeCCCCCCCeEEEEeE
Confidence 33433 234566666 33456677763
No 39
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.18 E-value=2.6e-09 Score=106.99 Aligned_cols=250 Identities=12% Similarity=0.145 Sum_probs=158.1
Q ss_pred CCCCeeEEeeccccc-CCCCCccHH-HHHHHHHHHcCCCCCcEEEEcCCcEEE--e-----eeeeecCC--CCCCeeEeE
Q 013309 49 SKSKRVIFVGDFGAK-GDGFNDDTE-AFANAWKKACSFPARTKIVFSAGYTFL--I-----HPIDISGP--CKSRLTLEI 117 (445)
Q Consensus 49 ~~~~~~~~v~dfGa~-gdg~tDdT~-Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl--~-----~~l~l~~~--~~s~v~l~~ 117 (445)
...+.++.|..-|-. ++|.+-++| .||+|++.| +. |.+|++.+| +|. + ..+.+... ....++|..
T Consensus 11 ~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a-~p--GdtI~l~~G-tY~~~~~e~~~~~i~~~~sGt~~~pIti~~ 86 (400)
T 1ru4_A 11 ISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV-NP--GELILLKPG-TYTIPYTQGKGNTITFNKSGKDGAPIYVAA 86 (400)
T ss_dssp CCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHC-CT--TCEEEECSE-EEECCCBTTBCCCEEECCCCBTTBCEEEEE
T ss_pred ccCccEEEEcCCCCCCCCCccccCCccHHHHHhhC-CC--CCEEEECCC-eEccccccccceeEEecCCCCCCCCEEEEE
Confidence 444667778654432 334233333 799999954 33 699999999 998 2 44555310 012377766
Q ss_pred ee----EEECCCCc-CCcCCCCccccEEEeceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEE
Q 013309 118 SG----TIVAPKDP-DVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKV 192 (445)
Q Consensus 118 ~G----~i~~~~~~-~~~~~~~~~~~i~~~~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I 192 (445)
++ +|. ...+ ..|... ...+.+ ..+.++|+|. +|...+. ..|.+.. .+.+|
T Consensus 87 ~~g~~~vI~-~~~~~g~~~~~--~~~i~i-~~~~~~i~gl-~I~n~g~-------------------~GI~v~g-s~~~i 141 (400)
T 1ru4_A 87 ANCGRAVFD-FSFPDSQWVQA--SYGFYV-TGDYWYFKGV-EVTRAGY-------------------QGAYVIG-SHNTF 141 (400)
T ss_dssp GGGCCEEEE-CCCCTTCCCTT--CCSEEE-CSSCEEEESE-EEESCSS-------------------CSEEECS-SSCEE
T ss_pred ecCCCCEEe-CCccCCccccc--eeEEEE-ECCeEEEEeE-EEEeCCC-------------------CcEEEeC-CCcEE
Confidence 52 333 2110 011000 022444 3467777772 2322110 1366665 78899
Q ss_pred eceEEEcCCCceeEEEcee-cEEEEeEEEECCCC----CCCCCceeeece--ecEEEEeeEEec-CCccEEEeCCceeEE
Q 013309 193 QNLRVVNSQQMHIAFTNCL-RVVISNLEVIAPAE----SPNTDGIHISAS--RGVEVKNSIVGT-GDDCISIVGNSSLIR 264 (445)
Q Consensus 193 ~~v~i~ns~~~~i~~~~~~-nv~I~n~~I~~~~~----~~n~DGi~~~~s--~nv~I~n~~i~~-gdD~i~i~~~~~ni~ 264 (445)
+++++.+....+|.+.... +.+|++++|....+ ..+.|||.+..+ ++.+|++|.+.. .||++.+......|+
T Consensus 142 ~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~ 221 (400)
T 1ru4_A 142 ENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVV 221 (400)
T ss_dssp ESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCE
T ss_pred EeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEE
Confidence 9999999877789988744 88899999987543 246899998753 789999999875 789999987677899
Q ss_pred EEeeEEcC--------------CceEEEeecCCcCCCccEEeEEEEcEEEeCC-cceEEEEEecCCCceeeeEEEEeEEE
Q 013309 265 IRNFACGP--------------GHGISIGSLGKSNSSVRIHDIMVYGALISNT-QNGVRIKTWQGGSGSATNIQFLDVLM 329 (445)
Q Consensus 265 I~n~~~~~--------------~~gi~igs~g~~~~~~~v~nv~i~n~~~~~~-~~gi~i~~~~g~~g~v~ni~~~ni~~ 329 (445)
|+||..+. +.|+.+|.. ....+.+|+||...+. .+|+.... .-.+++++|+++
T Consensus 222 i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~------~~~~~~~v~nn~a~~N~~~G~~~n~------~~~~~~i~nNt~ 289 (400)
T 1ru4_A 222 IENSWAFRNGINYWNDSAFAGNGNGFKLGGN------QAVGNHRITRSVAFGNVSKGFDQNN------NAGGVTVINNTS 289 (400)
T ss_dssp EESCEEESTTCCCSCCTTCCCCCCSEECCCT------TCCCCCEEESCEEESCSSEEEECTT------CSSCCEEESCEE
T ss_pred EEeEEEECCccccccccccccCCCCEEEecc------CCcCCEEEEeeEEECCcCcCEeecC------CCCCEEEECeEE
Confidence 99998742 236777652 2445778888888765 34775532 123478888888
Q ss_pred ecCCccEEEE
Q 013309 330 KNVSNPIIID 339 (445)
Q Consensus 330 ~~~~~~i~i~ 339 (445)
.+....+.+.
T Consensus 290 ~~N~~~~~~~ 299 (400)
T 1ru4_A 290 YKNGINYGFG 299 (400)
T ss_dssp ESSSEEEEEC
T ss_pred ECCccceEEe
Confidence 7666555553
No 40
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.17 E-value=1.5e-09 Score=111.53 Aligned_cols=207 Identities=11% Similarity=0.037 Sum_probs=119.8
Q ss_pred cHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeecCCC--CCCeeEeEe--e-E-EECCCCcCCcCCCCccccEEEec
Q 013309 70 DTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPC--KSRLTLEIS--G-T-IVAPKDPDVWKGLNRRRWLYFNR 143 (445)
Q Consensus 70 dT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l~l~~~~--~s~v~l~~~--G-~-i~~~~~~~~~~~~~~~~~i~~~~ 143 (445)
+.+.||+|++.| +. |++|++++| +|.-..+.+.+.. ...++|..+ + . |... ..+.+.+
T Consensus 30 ~~~~Lq~Ai~~A-~p--GDtI~L~~G-tY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~------------~~l~i~g 93 (506)
T 1dbg_A 30 SNETLYQVVKEV-KP--GGLVQIADG-TYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD------------AKVELRG 93 (506)
T ss_dssp SHHHHHHHHHHC-CT--TCEEEECSE-EEETCEEEECCCCBTTBCEEEEESSTTSEEEEES------------CEEEECS
T ss_pred CHHHHHHHHHhC-CC--CCEEEECCC-EEecceEEEecCCcCCCCEEEECCCCCccEEeCC------------ceEEEEc
Confidence 356799999953 33 799999999 9975456553211 234555543 1 1 1110 1233333
Q ss_pred eeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCc-eeEEE--------ceecEE
Q 013309 144 VNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQM-HIAFT--------NCLRVV 214 (445)
Q Consensus 144 ~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~-~i~~~--------~~~nv~ 214 (445)
++++|+|- +|.+.+..... . . ...+..+.+. ..+++|++++|.+...- .+.+. ..++.+
T Consensus 94 -~~v~i~GL-~i~~~~~~~~~-~---~-----~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~ 161 (506)
T 1dbg_A 94 -EHLILEGI-WFKDGNRAIQA-W---K-----SHGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCR 161 (506)
T ss_dssp -SSEEEESC-EEEEECCCTTT-C---C-----TTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCE
T ss_pred -CCEEEECe-EEECCCcceee-e---e-----cccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccE
Confidence 66666663 23322211000 0 0 0012234444 58889999999876321 03332 566778
Q ss_pred EEeEEEECCCCCCCCC----ceeeec-------eecEEEEeeEEec------CCccEEEeC---CceeEEEEeeEEcCCc
Q 013309 215 ISNLEVIAPAESPNTD----GIHISA-------SRGVEVKNSIVGT------GDDCISIVG---NSSLIRIRNFACGPGH 274 (445)
Q Consensus 215 I~n~~I~~~~~~~n~D----Gi~~~~-------s~nv~I~n~~i~~------gdD~i~i~~---~~~ni~I~n~~~~~~~ 274 (445)
|+++.|.......... ||+++. +.+.+|+++.|.. +-+.+.++. .+.+.+|+|+.+..++
T Consensus 162 I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~ 241 (506)
T 1dbg_A 162 IDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQD 241 (506)
T ss_dssp EESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEEC
T ss_pred EECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEecc
Confidence 9999998754333333 787775 3689999999985 334565552 2578899999887544
Q ss_pred -eEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEE
Q 013309 275 -GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKT 311 (445)
Q Consensus 275 -gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~ 311 (445)
|..|-+. .-.+.+|+++++.++..+|.+..
T Consensus 242 gg~aim~s-------kS~~n~i~~N~~~~~~ggi~l~~ 272 (506)
T 1dbg_A 242 SEAEIITS-------KSQENVYYGNTYLNCQGTMNFRH 272 (506)
T ss_dssp SSSEEEEE-------ESBSCEEESCEEESCSSEEEEEE
T ss_pred CcEEEEEE-------ecCCEEEECCEEEcccCcEEEee
Confidence 3333220 11246888888888877777763
No 41
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.75 E-value=7.2e-07 Score=87.59 Aligned_cols=111 Identities=15% Similarity=0.180 Sum_probs=71.4
Q ss_pred EEEEeecceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecC-----------
Q 013309 182 ITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTG----------- 250 (445)
Q Consensus 182 i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g----------- 250 (445)
|.+..++||.|++++|++.....-.+.. ...+....|+|.+.+++||.|++|.|..+
T Consensus 98 l~i~~~~NVIIrnl~i~~~~~~~p~~~~------------~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~ 165 (355)
T 1pcl_A 98 LVIKGVKNVILRNLYIETPVDVAPHYES------------GDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKD 165 (355)
T ss_pred EEEecCCeEEEeeeEEEcCccccccccc------------ccCccccCceEEecCCCcEEEEeeEEeccccCcccccccc
Confidence 5566677777777777653210000000 00011457899999999999999999864
Q ss_pred -------CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcC-CCccEEeEEEEcEEEeCCc
Q 013309 251 -------DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSN-SSVRIHDIMVYGALISNTQ 304 (445)
Q Consensus 251 -------dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~-~~~~v~nv~i~n~~~~~~~ 304 (445)
|.++.++.++.+|+|+||.|.... +.-+|+--... ......+|++.++.|.+..
T Consensus 166 G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 166 GEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVT 228 (355)
T ss_pred CccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCc
Confidence 555778778999999999998643 56666521000 0112347999999997763
No 42
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.62 E-value=1.9e-06 Score=83.51 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=76.3
Q ss_pred CCCCceeeec-eecEEEEeeEEec----------CCccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCC-CccEEeE
Q 013309 227 PNTDGIHISA-SRGVEVKNSIVGT----------GDDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNS-SVRIHDI 293 (445)
Q Consensus 227 ~n~DGi~~~~-s~nv~I~n~~i~~----------gdD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~-~~~v~nv 293 (445)
...|+|.+.. ++||.|++|.+.. .|..+.++.++.+|+|+||.|..-. +.-+|+- .. ...-.+|
T Consensus 118 ~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~s---d~~~~~~~~v 194 (326)
T 3vmv_A 118 GEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHT---DNASLAPDKI 194 (326)
T ss_dssp TTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSS---SCGGGCCEEE
T ss_pred CCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCC---CCCcccCccE
Confidence 4679999996 8999999999962 3667888888999999999997532 5667652 11 1112589
Q ss_pred EEEcEEEeCCcc-eEEEEEecCCCceeeeEEEEeEEEecC-CccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeE
Q 013309 294 MVYGALISNTQN-GVRIKTWQGGSGSATNIQFLDVLMKNV-SNPIIIDQYYCDSPVPCANQTSAVKVENITFIHI 366 (445)
Q Consensus 294 ~i~n~~~~~~~~-gi~i~~~~g~~g~v~ni~~~ni~~~~~-~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni 366 (445)
++.++.+.+... .-+++ . | .+++-|+.+.+. .+++.... .+...+|+-.|++.
T Consensus 195 T~~~N~f~~~~~R~Pr~r---~--G---~~Hv~NN~~~n~~~~~~~~~~------------~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 195 TYHHNYFNNLNSRVPLIR---Y--A---DVHMFNNYFKDINDTAINSRV------------GARVFVENNYFDNV 249 (326)
T ss_dssp EEESCEEEEEEECTTEEE---S--C---EEEEESCEEEEESSCSEEEET------------TCEEEEESCEEEEE
T ss_pred EEEeeEecCCcCcCCccc---C--C---cEEEEccEEECCCceEEeecC------------CcEEEEEceEEECC
Confidence 999999866421 22333 1 1 244444444443 24544431 24467888888887
No 43
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.62 E-value=4.7e-06 Score=80.99 Aligned_cols=73 Identities=15% Similarity=0.109 Sum_probs=57.5
Q ss_pred CCCceeeeceecEEEEeeEEecC-CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCc-----cEEeEEEEcEEE
Q 013309 228 NTDGIHISASRGVEVKNSIVGTG-DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSV-----RIHDIMVYGALI 300 (445)
Q Consensus 228 n~DGi~~~~s~nv~I~n~~i~~g-dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~-----~v~nv~i~n~~~ 300 (445)
..|+|.+..++||.|++|.+..+ |.++.++.++.+|+|+||.+.... +.-+|+- .... .-.+|++.++.+
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~s---d~~~~~~d~g~~~vT~hhN~f 191 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSS---DKEDPEQAGQAYKVTYHHNYF 191 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECCC---TTSCHHHHHHSCEEEEESCEE
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCcC---CCCccccccCCcEEEEECeEe
Confidence 78999999999999999999985 666888888999999999998643 5666652 1110 124899999999
Q ss_pred eCC
Q 013309 301 SNT 303 (445)
Q Consensus 301 ~~~ 303 (445)
.+.
T Consensus 192 ~~~ 194 (340)
T 3zsc_A 192 KNL 194 (340)
T ss_dssp ESC
T ss_pred cCC
Confidence 775
No 44
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.53 E-value=1.2e-06 Score=85.97 Aligned_cols=142 Identities=11% Similarity=0.052 Sum_probs=94.5
Q ss_pred ecceEEeceE----EEcCCCceeEEEceecEEEEeEEEECCC------------------CCCCCCceeeeceecEEEEe
Q 013309 187 CKNLKVQNLR----VVNSQQMHIAFTNCLRVVISNLEVIAPA------------------ESPNTDGIHISASRGVEVKN 244 (445)
Q Consensus 187 ~~nv~I~~v~----i~ns~~~~i~~~~~~nv~I~n~~I~~~~------------------~~~n~DGi~~~~s~nv~I~n 244 (445)
.++++|.+.. |.. ...++.+..++||.|+|++|+... .....|||.+.+++||.|++
T Consensus 87 ~sn~TI~G~ga~~~i~G-~G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDH 165 (346)
T 1pxz_A 87 AGHKTIDGRGADVHLGN-GGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDH 165 (346)
T ss_dssp CSSEEEECTTSCEEEET-TSCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEES
T ss_pred cCCeEEEccCCceEEeC-CcceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEe
Confidence 3467776642 211 135677778888888888887531 12578999999999999999
Q ss_pred eEEecCCccE-EEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEE-eCCcc-eEEEEEecCCCceee
Q 013309 245 SIVGTGDDCI-SIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALI-SNTQN-GVRIKTWQGGSGSAT 320 (445)
Q Consensus 245 ~~i~~gdD~i-~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~-~~~~~-gi~i~~~~g~~g~v~ 320 (445)
|.|..+.|++ .++.++.+|+|+||.+...+ ++-+|+--. .......+|++.++.| .+... .-+++. .
T Consensus 166 cs~s~~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~-~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~--------g 236 (346)
T 1pxz_A 166 NSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDT-YDDDKSMKVTVAFNQFGPNAGQRMPRARY--------G 236 (346)
T ss_dssp CEEECCSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSS-CGGGGGCEEEEESCEECSSEEECTTEEES--------S
T ss_pred eEEecCCCCcEeeccCcceEEEEeeEEecCCceeEECCCCc-cccCCceEEEEEeeEEeCCccccCccEec--------c
Confidence 9999977775 67777999999999998543 577766211 1112335899999999 55421 223331 2
Q ss_pred eEEEEeEEEecCC-ccEEE
Q 013309 321 NIQFLDVLMKNVS-NPIII 338 (445)
Q Consensus 321 ni~~~ni~~~~~~-~~i~i 338 (445)
.+++.|+.+.+.. +++..
T Consensus 237 ~~hv~NN~~~~~~~~~i~~ 255 (346)
T 1pxz_A 237 LVHVANNNYDPWNIYAIGG 255 (346)
T ss_dssp EEEEESCEECCCSSCSEEE
T ss_pred eEEEEeeEEEcccceEEec
Confidence 4666666666543 45444
No 45
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.52 E-value=1.1e-06 Score=86.29 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=50.9
Q ss_pred CCCCceeeeceecEEEEeeEEec-CCccEEE-eCCceeEEEEeeEEcCC----------c--eEEEeecCCcCCCccEEe
Q 013309 227 PNTDGIHISASRGVEVKNSIVGT-GDDCISI-VGNSSLIRIRNFACGPG----------H--GISIGSLGKSNSSVRIHD 292 (445)
Q Consensus 227 ~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i-~~~~~ni~I~n~~~~~~----------~--gi~igs~g~~~~~~~v~n 292 (445)
...|+|.+..++||.|++|.+.. +|..+.. ..++.+|+|+||.|.+. | +..+ .|. -.+
T Consensus 151 ~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L--~G~------sd~ 222 (359)
T 1idk_A 151 WGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYL--DGD------ADL 222 (359)
T ss_dssp TSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEE--CCS------SCE
T ss_pred ccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccccceEEE--Eec------CCC
Confidence 35789999999999999999986 6666665 45689999999999631 1 2222 111 138
Q ss_pred EEEEcEEEeCC
Q 013309 293 IMVYGALISNT 303 (445)
Q Consensus 293 v~i~n~~~~~~ 303 (445)
|++.++.+.+.
T Consensus 223 vT~hhN~f~~~ 233 (359)
T 1idk_A 223 VTMKGNYIYHT 233 (359)
T ss_dssp EEEESCEEESB
T ss_pred eEEEceEeecC
Confidence 99999999865
No 46
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.49 E-value=3.2e-06 Score=82.84 Aligned_cols=130 Identities=11% Similarity=0.049 Sum_probs=92.2
Q ss_pred EEEEeecceEEeceEEEcC----------------------CCceeEEEceecEEEEeEEEECCCCCCCCCce-ee-ece
Q 013309 182 ITFHKCKNLKVQNLRVVNS----------------------QQMHIAFTNCLRVVISNLEVIAPAESPNTDGI-HI-SAS 237 (445)
Q Consensus 182 i~~~~~~nv~I~~v~i~ns----------------------~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi-~~-~~s 237 (445)
|.+..++||.|++++|++. ...+|.+..+++|.|++|++.. ..||+ ++ ..+
T Consensus 108 i~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~-----~~Dg~id~~~~s 182 (346)
T 1pxz_A 108 LFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSD-----CSDGLIDVTLGS 182 (346)
T ss_dssp EEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEEC-----CSSEEEEEESSC
T ss_pred EEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEec-----CCCCcEeeccCc
Confidence 6666788888888888753 2346888999999999999986 46786 66 479
Q ss_pred ecEEEEeeEEecCCccEEEeCC-------ceeEEEEeeEE-cCCc--eEEEeecCCcCCCccEEeEEEEcEEEeCCc-ce
Q 013309 238 RGVEVKNSIVGTGDDCISIVGN-------SSLIRIRNFAC-GPGH--GISIGSLGKSNSSVRIHDIMVYGALISNTQ-NG 306 (445)
Q Consensus 238 ~nv~I~n~~i~~gdD~i~i~~~-------~~ni~I~n~~~-~~~~--gi~igs~g~~~~~~~v~nv~i~n~~~~~~~-~g 306 (445)
++|+|++|.|...+.++-+++. ..+|++.+|.+ .+.. .-.+.. ..+++.|+.+.+-. ++
T Consensus 183 ~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~----------g~~hv~NN~~~~~~~~~ 252 (346)
T 1pxz_A 183 TGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARY----------GLVHVANNNYDPWNIYA 252 (346)
T ss_dssp EEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEES----------SEEEEESCEECCCSSCS
T ss_pred ceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEec----------ceEEEEeeEEEcccceE
Confidence 9999999999977666666542 24899999998 4432 122211 37889999998743 55
Q ss_pred EEEEEecCCCceeeeEEEEeEEEecCC
Q 013309 307 VRIKTWQGGSGSATNIQFLDVLMKNVS 333 (445)
Q Consensus 307 i~i~~~~g~~g~v~ni~~~ni~~~~~~ 333 (445)
+.... -..+.++++.+...+
T Consensus 253 i~~~~-------~~~i~~egN~F~~~~ 272 (346)
T 1pxz_A 253 IGGSS-------NPTILSEGNSFTAPS 272 (346)
T ss_dssp EEEES-------CCEEEEESCEEECCS
T ss_pred EeccC-------CceEEEECCEEECCC
Confidence 54431 246778888877654
No 47
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.42 E-value=8.3e-06 Score=79.26 Aligned_cols=154 Identities=14% Similarity=0.099 Sum_probs=106.7
Q ss_pred eeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcC-----------CCceeEEEceecE
Q 013309 145 NHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNS-----------QQMHIAFTNCLRV 213 (445)
Q Consensus 145 ~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns-----------~~~~i~~~~~~nv 213 (445)
..+.|.-.-||+|++..-.. ...|.+.+++||.|++++|++. ...+|.+..+++|
T Consensus 62 ~~l~v~snkTI~G~ga~~I~--------------G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nV 127 (340)
T 3zsc_A 62 REIKVLSDKTIVGINDAKIV--------------GGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHI 127 (340)
T ss_dssp EEEEECSSEEEEEEEEEEEE--------------EEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEE
T ss_pred ceEEecCCCEEEeccCcEEe--------------cCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcE
Confidence 46777666799998854111 1258888999999999999975 3457999999999
Q ss_pred EEEeEEEECCCCCCCCCc-eeee-ceecEEEEeeEEecCCccEEEeCCc----------eeEEEEeeEEcCCc--eEEEe
Q 013309 214 VISNLEVIAPAESPNTDG-IHIS-ASRGVEVKNSIVGTGDDCISIVGNS----------SLIRIRNFACGPGH--GISIG 279 (445)
Q Consensus 214 ~I~n~~I~~~~~~~n~DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~~~~----------~ni~I~n~~~~~~~--gi~ig 279 (445)
.|++|.+... .|| +++. .+++|+|++|.|...+-+.-++... .+|++.+|.+.+.. .=++.
T Consensus 128 WIDHcs~s~~-----~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r 202 (340)
T 3zsc_A 128 WIDHITFVNG-----NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR 202 (340)
T ss_dssp EEESCEEESC-----SSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEE
T ss_pred EEEeeeeccC-----CccceEEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCccc
Confidence 9999999873 566 6776 4899999999999766665555421 37999999886432 11221
Q ss_pred ecCCcCCCccEEeEEEEcEEEeC----------C-cceEEEEEecCCCceeeeEEEEeEEEecCCc
Q 013309 280 SLGKSNSSVRIHDIMVYGALISN----------T-QNGVRIKTWQGGSGSATNIQFLDVLMKNVSN 334 (445)
Q Consensus 280 s~g~~~~~~~v~nv~i~n~~~~~----------~-~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~ 334 (445)
. -.+++-|+.+.+ - .+++... .+ ..|.+|++.+++++.
T Consensus 203 ~----------G~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~--~~-----a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 203 F----------GMAHVFNNFYSMGLRTGVSGNVFPIYGVASA--MG-----AKVHVEGNYFMGYGA 251 (340)
T ss_dssp S----------SEEEEESCEEECCCCCSCSSCCSCCEEEEEE--TT-----CEEEEESCEEECSCH
T ss_pred C----------CeEEEEccEEECCccccccccceeeeeEecC--CC-----CEEEEECcEEECCCc
Confidence 0 146888888887 1 2233332 22 467777777777765
No 48
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.35 E-value=3.7e-06 Score=82.48 Aligned_cols=155 Identities=17% Similarity=0.144 Sum_probs=96.1
Q ss_pred cceEEeceEEEcCCCceeEEEceecEEEEeEEEECCC-CCCCCCceeeeceecEEEEeeEEecC--------------Cc
Q 013309 188 KNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPA-ESPNTDGIHISASRGVEVKNSIVGTG--------------DD 252 (445)
Q Consensus 188 ~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~-~~~n~DGi~~~~s~nv~I~n~~i~~g--------------dD 252 (445)
.|++|.+.+-. ....+|.+..++||.|+|++|+... .....|+|.+..++||.|++|.+..+ |.
T Consensus 89 sn~TI~G~~~~-~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DG 167 (353)
T 1air_A 89 KGITIIGANGS-SANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFES 167 (353)
T ss_dssp SCEEEEECTTC-CBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCC
T ss_pred CCEEEEeccCC-CCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCccccccccccccccc
Confidence 45555554210 1234666667777777777777532 13468999999999999999999743 55
Q ss_pred cEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCc-ceEEEEEecCCCceeeeEEEEeEEEe
Q 013309 253 CISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQ-NGVRIKTWQGGSGSATNIQFLDVLMK 330 (445)
Q Consensus 253 ~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~-~gi~i~~~~g~~g~v~ni~~~ni~~~ 330 (445)
.+.++.++.+|+|+||.|...+ +.-+|+- ..... .+|+|.++.|.+.. +.-+++ . | .+++-|+.+.
T Consensus 168 l~di~~~s~~VTISnn~f~~h~k~~LiG~s---d~~~g-~~vT~hhN~f~~~~~R~Pr~r---~--G---~~Hv~NN~~~ 235 (353)
T 1air_A 168 AVDIKGASNTVTVSYNYIHGVKKVGLDGSS---SSDTG-RNITYHHNYYNDVNARLPLQR---G--G---LVHAYNNLYT 235 (353)
T ss_dssp SEEEESSCCEEEEESCEEEEEEECCEESSS---TTCCC-CEEEEESCEEEEEEECSCEEE---S--S---EEEEESCEEE
T ss_pred ceeeecccCcEEEEeeEEcCCCceeEECCC---cCCCC-ceEEEEceEEcCCcCCCCCCc---C--c---eEEEEccEEE
Confidence 6788888999999999998543 3445552 11212 68999999997642 222332 1 2 2334444444
Q ss_pred cCC-ccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEE
Q 013309 331 NVS-NPIIIDQYYCDSPVPCANQTSAVKVENITFIHIK 367 (445)
Q Consensus 331 ~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~ 367 (445)
+.. +++.... .....+|+-.|++..
T Consensus 236 n~~~~~~~~~~------------~~~i~~e~N~F~~~~ 261 (353)
T 1air_A 236 NITGSGLNVRQ------------NGQALIENNWFEKAI 261 (353)
T ss_dssp EESSCSEEEET------------TCEEEEESCEEEEEE
T ss_pred CCCCceeccCC------------CcEEEEEceEEECCC
Confidence 322 3444321 234677888888763
No 49
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.33 E-value=7.5e-06 Score=79.75 Aligned_cols=164 Identities=14% Similarity=0.118 Sum_probs=101.6
Q ss_pred EEEEeecceEEeceEEEcCCCceeEEE-ceecEEEEeEEEECCCCCCCCCceeee-----ceecEEEEeeEEecC-----
Q 013309 182 ITFHKCKNLKVQNLRVVNSQQMHIAFT-NCLRVVISNLEVIAPAESPNTDGIHIS-----ASRGVEVKNSIVGTG----- 250 (445)
Q Consensus 182 i~~~~~~nv~I~~v~i~ns~~~~i~~~-~~~nv~I~n~~I~~~~~~~n~DGi~~~-----~s~nv~I~n~~i~~g----- 250 (445)
+.+.-.+|.+|.+-+.. -...++.+. .++||.|+|++|+........|+|.+. .++||.|++|.+..+
T Consensus 66 ~~l~v~sn~TI~G~~a~-i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~ 144 (330)
T 2qy1_A 66 VQIKNKSDVTIKGANGS-AANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCS 144 (330)
T ss_dssp EEEESCCSEEEEECTTC-BBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCT
T ss_pred eEEEcCCCeEEECCCcE-EeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccc
Confidence 33443556666442110 014567777 788899999998864322368999999 599999999999642
Q ss_pred -------CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCCcc-eEEEEEecCCCceeee
Q 013309 251 -------DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQN-GVRIKTWQGGSGSATN 321 (445)
Q Consensus 251 -------dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~-gi~i~~~~g~~g~v~n 321 (445)
|..+.++.++.+|+|+||.|.... ++-+|+- .........+|++.++.|.+... .-+++ . | .
T Consensus 145 ~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~s-d~~~~~~~~~vT~h~N~f~~~~~R~Pr~r---~--G---~ 215 (330)
T 2qy1_A 145 GAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYS-DSDTKNSAARTTYHHNRFENVESRVPLQR---F--G---L 215 (330)
T ss_dssp TCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSS-TTCGGGGGCEEEEESCEEEEEEECTTEEE---S--S---E
T ss_pred cCCcceeecccccccCcceEEEEcceeccCCeEEEECCC-CccccCCCceEEEECcEEcCCCCCCCcee---c--c---e
Confidence 556788888999999999997543 4666652 10111112589999999976421 22332 1 2 2
Q ss_pred EEEEeEEEecC-CccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEE
Q 013309 322 IQFLDVLMKNV-SNPIIIDQYYCDSPVPCANQTSAVKVENITFIHIK 367 (445)
Q Consensus 322 i~~~ni~~~~~-~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~ 367 (445)
+++-|+.+.+. .+++.... .+...+|+-.|++..
T Consensus 216 ~hv~NN~~~n~~~~~i~~~~------------~~~i~~e~N~F~~~~ 250 (330)
T 2qy1_A 216 SHIYNNYFNNVTTSGINVRM------------GGIAKIESNYFENIK 250 (330)
T ss_dssp EEEESCEEEEECSCSEEEET------------TCEEEEESCEEEEEE
T ss_pred EEEEeeEEEcccceEeccCC------------CcEEEEEccEEECCC
Confidence 44444444443 24444331 234678888888764
No 50
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.30 E-value=2.5e-05 Score=76.07 Aligned_cols=140 Identities=15% Similarity=0.144 Sum_probs=95.1
Q ss_pred EEEEE-eecceEEeceEEEcCC----CceeEEE-----ceecEEEEeEEEECCCC------CCCCCc-eeee-ceecEEE
Q 013309 181 AITFH-KCKNLKVQNLRVVNSQ----QMHIAFT-----NCLRVVISNLEVIAPAE------SPNTDG-IHIS-ASRGVEV 242 (445)
Q Consensus 181 ~i~~~-~~~nv~I~~v~i~ns~----~~~i~~~-----~~~nv~I~n~~I~~~~~------~~n~DG-i~~~-~s~nv~I 242 (445)
.|.+. .++||.|++++|++.. ...|.+. .+++|.|++|++....+ ....|| +++. .+.+|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 47888 8999999999999864 5679998 59999999999974321 011254 4655 4899999
Q ss_pred EeeEEecCCccEEEeCC-------ceeEEEEeeEEcCCc--eEEEeecCCcCCCccEEeEEEEcEEEeCC-cceEEEEEe
Q 013309 243 KNSIVGTGDDCISIVGN-------SSLIRIRNFACGPGH--GISIGSLGKSNSSVRIHDIMVYGALISNT-QNGVRIKTW 312 (445)
Q Consensus 243 ~n~~i~~gdD~i~i~~~-------~~ni~I~n~~~~~~~--gi~igs~g~~~~~~~v~nv~i~n~~~~~~-~~gi~i~~~ 312 (445)
++|.|...+-++-+++. ..+|++.+|.+.+.. .=.+. . -.+++.|+.+.+. .+++...
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r-------~---G~~hv~NN~~~n~~~~~i~~~-- 234 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQR-------F---GLSHIYNNYFNNVTTSGINVR-- 234 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEE-------S---SEEEEESCEEEEECSCSEEEE--
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCcee-------c---ceEEEEeeEEEcccceEeccC--
Confidence 99999876555545442 158999999885321 11121 1 1478888888774 3565543
Q ss_pred cCCCceeeeEEEEeEEEecCCccEE
Q 013309 313 QGGSGSATNIQFLDVLMKNVSNPII 337 (445)
Q Consensus 313 ~g~~g~v~ni~~~ni~~~~~~~~i~ 337 (445)
.+ ..|.+|++.+++.+.|+.
T Consensus 235 ~~-----~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 235 MG-----GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp TT-----CEEEEESCEEEEEESSEE
T ss_pred CC-----cEEEEEccEEECCCCcee
Confidence 22 356777777776655643
No 51
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.29 E-value=9.4e-06 Score=79.72 Aligned_cols=73 Identities=16% Similarity=0.283 Sum_probs=56.0
Q ss_pred CCCceeeec-eecEEEEeeEEecC------------------CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCC
Q 013309 228 NTDGIHISA-SRGVEVKNSIVGTG------------------DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSS 287 (445)
Q Consensus 228 n~DGi~~~~-s~nv~I~n~~i~~g------------------dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~ 287 (445)
..|+|.+.. ++||.|++|.|..+ |.++.++.++.+|+|+||.|..-. ++-+|+- ...
T Consensus 142 ~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~s---d~~ 218 (361)
T 1pe9_A 142 EWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHS---DSN 218 (361)
T ss_dssp CCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCC---TTC
T ss_pred CCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCC---CCC
Confidence 578999999 99999999999863 667888888999999999997532 4666652 111
Q ss_pred ----ccEEeEEEEcEEEeCC
Q 013309 288 ----VRIHDIMVYGALISNT 303 (445)
Q Consensus 288 ----~~v~nv~i~n~~~~~~ 303 (445)
..-..|++.++.|.+.
T Consensus 219 ~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 219 GSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp HHHHTTCCEEEEESCEEEEE
T ss_pred cccccCcceEEEECeEEcCc
Confidence 1234799999999764
No 52
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.25 E-value=1.6e-05 Score=78.09 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=45.4
Q ss_pred EeecceEEeceEEEcCCC--------------------ceeEEE-ceecEEEEeEEEECCCCCCCCCceeeeceecEEEE
Q 013309 185 HKCKNLKVQNLRVVNSQQ--------------------MHIAFT-NCLRVVISNLEVIAPAESPNTDGIHISASRGVEVK 243 (445)
Q Consensus 185 ~~~~nv~I~~v~i~ns~~--------------------~~i~~~-~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~ 243 (445)
..+++++++|++|+|+.. -.+.+. .++...+.+|.+.. ..|.+.........++
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~yf~ 193 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEG-----YQDTLYSKTGSRSYFS 193 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEEC-----SBSCEEECTTCEEEEE
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEe-----cccceEeCCCCCEEEE
Confidence 357899999999998742 123333 35666677777765 3445554433455666
Q ss_pred eeEEecCCccEEEeCCceeEEEEeeEE
Q 013309 244 NSIVGTGDDCISIVGNSSLIRIRNFAC 270 (445)
Q Consensus 244 n~~i~~gdD~i~i~~~~~ni~I~n~~~ 270 (445)
+|.|...-|-| ++ .....++||++
T Consensus 194 ~c~I~GtvDFI-FG--~a~a~f~~c~i 217 (364)
T 3uw0_A 194 DCEISGHVDFI-FG--SGITVFDNCNI 217 (364)
T ss_dssp SCEEEESEEEE-EE--SSEEEEESCEE
T ss_pred cCEEEcCCCEE-CC--cceEEEEeeEE
Confidence 66666544433 11 23456666655
No 53
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.24 E-value=3.4e-05 Score=74.63 Aligned_cols=134 Identities=10% Similarity=0.154 Sum_probs=80.8
Q ss_pred EEEEeecceEEeceEEEcCC------CceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEE
Q 013309 182 ITFHKCKNLKVQNLRVVNSQ------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCIS 255 (445)
Q Consensus 182 i~~~~~~nv~I~~v~i~ns~------~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~ 255 (445)
+.+ .+++++++|++|+|.. ...+.+ .++++.+.+|.|.. ..|++.....++ .+++|.|...-|-|.
T Consensus 89 v~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r~-~~~~c~I~G~vDFIf 160 (319)
T 1gq8_A 89 VAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQDSLYVHSNRQ-FFINCFIAGTVDFIF 160 (319)
T ss_dssp EEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STTCEEECSSEE-EEESCEEEESSSCEE
T ss_pred EEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cceeeeecCccE-EEEecEEEeeeeEEe
Confidence 444 4899999999999964 223444 57778888888887 456677766554 888888887666553
Q ss_pred EeCCceeEEEEeeEEcC-----C-ce-EEEeecCCcCCCccEEeEEEEcEEEeCCcc--------eEEEEEecCCCceee
Q 013309 256 IVGNSSLIRIRNFACGP-----G-HG-ISIGSLGKSNSSVRIHDIMVYGALISNTQN--------GVRIKTWQGGSGSAT 320 (445)
Q Consensus 256 i~~~~~ni~I~n~~~~~-----~-~g-i~igs~g~~~~~~~v~nv~i~n~~~~~~~~--------gi~i~~~~g~~g~v~ 320 (445)
+ .....++||++.. + .+ |.-- |. .+...-....|.||++..... ...+. ++. ..-.
T Consensus 161 -G--~~~a~f~~c~i~~~~~~~~~~~~itA~--~r-~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLG-RpW--~~~s 231 (319)
T 1gq8_A 161 -G--NAAVVLQDCDIHARRPGSGQKNMVTAQ--GR-TDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLG-RPW--KEYS 231 (319)
T ss_dssp -E--SCEEEEESCEEEECCCSTTCCEEEEEE--CC-CSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEE-CCS--STTC
T ss_pred -c--CCcEEEEeeEEEEecCCCCCceEEEeC--CC-CCCCCCceEEEECCEEecCCCccccccceeEEec-ccC--CCcc
Confidence 2 2357788887742 1 12 2221 11 123344577888888865431 12221 111 1234
Q ss_pred eEEEEeEEEecC
Q 013309 321 NIQFLDVLMKNV 332 (445)
Q Consensus 321 ni~~~ni~~~~~ 332 (445)
.++|.+..|.+.
T Consensus 232 r~v~~~t~~~~~ 243 (319)
T 1gq8_A 232 RTVVMQSSITNV 243 (319)
T ss_dssp EEEEESCEECTT
T ss_pred eEEEEeccCCCc
Confidence 677777777654
No 54
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.24 E-value=1e-05 Score=79.62 Aligned_cols=131 Identities=7% Similarity=0.169 Sum_probs=102.3
Q ss_pred cceEEeceEEEcC-----C------CceeEEEc-eecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEE
Q 013309 188 KNLKVQNLRVVNS-----Q------QMHIAFTN-CLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCIS 255 (445)
Q Consensus 188 ~nv~I~~v~i~ns-----~------~~~i~~~~-~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~ 255 (445)
++|+|++++|++. . .-+|.+.. .++++|+++.|.. +.-||.+..+++++|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 6777777777765 3 23588875 8889999999998 4568999999999999999998788999
Q ss_pred EeCCceeEEEEeeEEcC---CceEEEeecCCcCCCccEEeEEEEcEEE-eCCcceEEEEEecCCCceeeeEEEEeEEEec
Q 013309 256 IVGNSSLIRIRNFACGP---GHGISIGSLGKSNSSVRIHDIMVYGALI-SNTQNGVRIKTWQGGSGSATNIQFLDVLMKN 331 (445)
Q Consensus 256 i~~~~~ni~I~n~~~~~---~~gi~igs~g~~~~~~~v~nv~i~n~~~-~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~ 331 (445)
++..++...|+|+.+.. |+||.+. ...+..|+++.+ .+.++|+.+.. ..+..|+++++++
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~---------ns~~~~I~~N~i~~~~R~gIh~m~-------s~~~~i~~N~f~~ 274 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAE---------NHEGLLVTGNNLFPRGRSLIEFTG-------CNRCSVTSNRLQG 274 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEE---------SEESCEEESCEECSCSSEEEEEES-------CBSCEEESCEEEE
T ss_pred eccccccceEecceeeecCCCCEEEEE---------eCCCCEEECCCcccCcceEEEEEc-------cCCCEEECCEEec
Confidence 99878999999999875 3447664 367889999977 55889999873 3556677777776
Q ss_pred CCccEEEE
Q 013309 332 VSNPIIID 339 (445)
Q Consensus 332 ~~~~i~i~ 339 (445)
...++.+-
T Consensus 275 ~~~Gi~~M 282 (410)
T 2inu_A 275 FYPGMLRL 282 (410)
T ss_dssp SSSCSEEE
T ss_pred ceeEEEEE
Confidence 66665543
No 55
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.23 E-value=5.3e-05 Score=73.23 Aligned_cols=134 Identities=10% Similarity=0.079 Sum_probs=86.7
Q ss_pred EEEEeecceEEeceEEEcCC------CceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEE
Q 013309 182 ITFHKCKNLKVQNLRVVNSQ------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCIS 255 (445)
Q Consensus 182 i~~~~~~nv~I~~v~i~ns~------~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~ 255 (445)
+.+ .+++++++|++|+|.. ...+.+ .++.+.+.||.|.. ..|++.....++ .+++|.|...-|-|.
T Consensus 85 v~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r~-~~~~c~I~G~vDFIf 156 (317)
T 1xg2_A 85 LAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQDTLYAHSQRQ-FYRDSYVTGTVDFIF 156 (317)
T ss_dssp EEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----STTCEEECSSEE-EEESCEEEESSSCEE
T ss_pred EEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cccceeecCccE-EEEeeEEEeceeEEc
Confidence 444 6899999999999974 233554 57888999999997 466777776654 889999987666553
Q ss_pred EeCCceeEEEEeeEEcC-----C-ce-EEEeecCCcCCCccEEeEEEEcEEEeCCcc--------eEEEEEecCCCceee
Q 013309 256 IVGNSSLIRIRNFACGP-----G-HG-ISIGSLGKSNSSVRIHDIMVYGALISNTQN--------GVRIKTWQGGSGSAT 320 (445)
Q Consensus 256 i~~~~~ni~I~n~~~~~-----~-~g-i~igs~g~~~~~~~v~nv~i~n~~~~~~~~--------gi~i~~~~g~~g~v~ 320 (445)
+ .....++||++.. + .+ |.-- +. .+...-....|.||++..... ...+. ++. ..-.
T Consensus 157 -G--~~~avf~~c~i~~~~~~~~~~~~itA~--~r-~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLG-RpW--~~~s 227 (317)
T 1xg2_A 157 -G--NAAVVFQKCQLVARKPGKYQQNMVTAQ--GR-TDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLG-RPW--KEYS 227 (317)
T ss_dssp -E--CCEEEEESCEEEECCCSTTCCEEEEEE--CC-CCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEE-CCS--STTC
T ss_pred -C--CceEEEeeeEEEEeccCCCCccEEEec--Cc-CCCCCCcEEEEECCEEecCCCccccccceeEEee-ccc--CCCc
Confidence 2 2358888888752 1 22 3321 11 123445678899999876532 12222 121 1235
Q ss_pred eEEEEeEEEecC
Q 013309 321 NIQFLDVLMKNV 332 (445)
Q Consensus 321 ni~~~ni~~~~~ 332 (445)
.++|.+..|.+.
T Consensus 228 r~v~~~t~~~~~ 239 (317)
T 1xg2_A 228 RTVVMESYLGGL 239 (317)
T ss_dssp EEEEESCEECTT
T ss_pred eEEEEecccCCc
Confidence 788888888764
No 56
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.23 E-value=7.4e-06 Score=80.57 Aligned_cols=67 Identities=19% Similarity=0.164 Sum_probs=49.4
Q ss_pred CCCceeeeceecEEEEeeEEec-CCccEE-EeCCceeEEEEeeEEcCC----------c--e-EEEeecCCcCCCccEEe
Q 013309 228 NTDGIHISASRGVEVKNSIVGT-GDDCIS-IVGNSSLIRIRNFACGPG----------H--G-ISIGSLGKSNSSVRIHD 292 (445)
Q Consensus 228 n~DGi~~~~s~nv~I~n~~i~~-gdD~i~-i~~~~~ni~I~n~~~~~~----------~--g-i~igs~g~~~~~~~v~n 292 (445)
..|||.+..++||.|++|.+.. +|..+. ...++.+|+|+||.+... | + +-+|+ -.+
T Consensus 152 ~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~---------sd~ 222 (359)
T 1qcx_A 152 GGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGS---------NDM 222 (359)
T ss_dssp SCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCS---------SEE
T ss_pred cCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccccceeEEecC---------CCC
Confidence 5689999999999999999986 555553 344689999999999632 2 2 22232 138
Q ss_pred EEEEcEEEeCC
Q 013309 293 IMVYGALISNT 303 (445)
Q Consensus 293 v~i~n~~~~~~ 303 (445)
+++.++.+.+.
T Consensus 223 vT~~~N~f~~~ 233 (359)
T 1qcx_A 223 VTLKGNYFYNL 233 (359)
T ss_dssp EEEESCEEESB
T ss_pred eehcccEeccC
Confidence 89999998765
No 57
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.18 E-value=7.7e-05 Score=73.33 Aligned_cols=135 Identities=13% Similarity=0.105 Sum_probs=92.4
Q ss_pred EEEE-eecceEEeceEEEcCC------CceeEEEceecEEEEeEEEECCCCCCCCCcee---eeceecEEEEeeEEecCC
Q 013309 182 ITFH-KCKNLKVQNLRVVNSQ------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIH---ISASRGVEVKNSIVGTGD 251 (445)
Q Consensus 182 i~~~-~~~nv~I~~v~i~ns~------~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~---~~~s~nv~I~n~~i~~gd 251 (445)
|.+. .++||.|++++|++.. ..+|.+..+++|.|++|++... .|+.. ...+++|+|++|.|....
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~-----~d~~~~~~~~~s~~vTISnn~f~~~~ 200 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI-----GRQHIVLGTSADNRVTISYSLIDGRS 200 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE-----SSCSEEECSSCCEEEEEESCEEECBC
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc-----CcCceeecccccccEEEECcEecCCc
Confidence 7777 8999999999999753 3678999999999999999863 33332 336899999999998432
Q ss_pred -----------ccEEEeCCceeEEEEeeEEcCCce--EEEeecCCcCCCccEEeEEEEcEEEeCC-cceEEEEEecCCCc
Q 013309 252 -----------DCISIVGNSSLIRIRNFACGPGHG--ISIGSLGKSNSSVRIHDIMVYGALISNT-QNGVRIKTWQGGSG 317 (445)
Q Consensus 252 -----------D~i~i~~~~~ni~I~n~~~~~~~g--i~igs~g~~~~~~~v~nv~i~n~~~~~~-~~gi~i~~~~g~~g 317 (445)
...-+...+.++++.++.+.+..+ =.+. .-..+++.|+.+.+. .+++...
T Consensus 201 ~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r---------~~~~~hv~NN~~~n~~~~a~~~~------- 264 (359)
T 1qcx_A 201 DYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ---------GNTLLHAVNNLFHNFDGHAFEIG------- 264 (359)
T ss_dssp SSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC---------SSEEEEEESCEEEEEEEEEEEEC-------
T ss_pred cccccCcccccceeEEecCCCCeehcccEeccCcccCceec---------CCceEEEEccEEECccCeEEecC-------
Confidence 123333336789999998754211 1111 113688899998874 2444432
Q ss_pred eeeeEEEEeEEEecCCccEE
Q 013309 318 SATNIQFLDVLMKNVSNPII 337 (445)
Q Consensus 318 ~v~ni~~~ni~~~~~~~~i~ 337 (445)
.-..|.++++.+++.+.|+.
T Consensus 265 ~~~~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 265 TGGYVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp TTEEEEEESCEEEEEEEEEC
T ss_pred CCceEEEEeeEEECCCcccC
Confidence 22578888888887766643
No 58
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.17 E-value=7.5e-06 Score=81.86 Aligned_cols=100 Identities=20% Similarity=0.233 Sum_probs=69.6
Q ss_pred eeEEEceecEEEEeEEEECCCC---------------CCCCCceeeeceecEEEEeeEEecC------------------
Q 013309 204 HIAFTNCLRVVISNLEVIAPAE---------------SPNTDGIHISASRGVEVKNSIVGTG------------------ 250 (445)
Q Consensus 204 ~i~~~~~~nv~I~n~~I~~~~~---------------~~n~DGi~~~~s~nv~I~n~~i~~g------------------ 250 (445)
+|.+..++||.|+|++|+...+ ....|+|.+..++||.|++|.|..+
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 4555566666666666664321 1357999999999999999999864
Q ss_pred CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCC
Q 013309 251 DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNT 303 (445)
Q Consensus 251 dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~ 303 (445)
|..+.++.++.+|+|+||.|.+.. +.-+|+--..........|+|.++.|.+.
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 667888888999999999997543 46666621000011234699999999765
No 59
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.14 E-value=2.8e-05 Score=76.20 Aligned_cols=140 Identities=16% Similarity=0.144 Sum_probs=94.6
Q ss_pred EEEEEeecceEEeceEEEcCC-----CceeEEEceecEEEEeEEEECCCCC--------CCCCc-eeee-ceecEEEEee
Q 013309 181 AITFHKCKNLKVQNLRVVNSQ-----QMHIAFTNCLRVVISNLEVIAPAES--------PNTDG-IHIS-ASRGVEVKNS 245 (445)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns~-----~~~i~~~~~~nv~I~n~~I~~~~~~--------~n~DG-i~~~-~s~nv~I~n~ 245 (445)
.|.+..++||.|++++|+..+ ...|.+..+++|.|++|.+....+. ...|| +++. .+++|+|++|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 588889999999999999754 3579999999999999999853211 11365 4554 6899999999
Q ss_pred EEecCCccEEEeCC----ceeEEEEeeEEcCC--ceEEEeecCCcCCCccEEeEEEEcEEEeCCc-ceEEEEEecCCCce
Q 013309 246 IVGTGDDCISIVGN----SSLIRIRNFACGPG--HGISIGSLGKSNSSVRIHDIMVYGALISNTQ-NGVRIKTWQGGSGS 318 (445)
Q Consensus 246 ~i~~gdD~i~i~~~----~~ni~I~n~~~~~~--~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~-~gi~i~~~~g~~g~ 318 (445)
.|...+-..-+++. ..+|++.+|.+.+. +.-++.- -.+++.|+.+.+.. +|+... .+
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r~----------G~~Hv~NN~~~n~~~~~~~~~--~~---- 247 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRG----------GLVHAYNNLYTNITGSGLNVR--QN---- 247 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEES----------SEEEEESCEEEEESSCSEEEE--TT----
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCcC----------ceEEEEccEEECCCCceeccC--CC----
Confidence 99865444434331 15799999988532 1122211 25778888887743 465442 12
Q ss_pred eeeEEEEeEEEecCCccEE
Q 013309 319 ATNIQFLDVLMKNVSNPII 337 (445)
Q Consensus 319 v~ni~~~ni~~~~~~~~i~ 337 (445)
..|.+|++.+++...|+.
T Consensus 248 -~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 248 -GQALIENNWFEKAINPVT 265 (353)
T ss_dssp -CEEEEESCEEEEEESSEE
T ss_pred -cEEEEEceEEECCCCceE
Confidence 256777777776666653
No 60
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.08 E-value=0.0019 Score=60.33 Aligned_cols=180 Identities=19% Similarity=0.283 Sum_probs=116.7
Q ss_pred CeeEEeecccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeecCCCCCCeeEeEe--eEEECCCCcCC
Q 013309 52 KRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLEIS--GTIVAPKDPDV 129 (445)
Q Consensus 52 ~~~~~v~dfGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l~l~~~~~s~v~l~~~--G~i~~~~~~~~ 129 (445)
++++.+++|||.+|-.+||+++|.+.+.. -..|.+|.| .|-..-+.+ +...|+.. |+|.-.+..-
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s------~~~v~i~~g-vf~ss~i~~-----~~c~l~g~g~g~~~~~~~~g- 128 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNS------QKAVTISDG-VFSSSGINS-----NYCNLDGRGSGVLSHRSSTG- 128 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTS------SSCEECCSE-EEEECCEEE-----SCCEEECTTTEEEEECSSSS-
T ss_pred heeeecccccccCCcccCcHHHHHhhhcc------cccEecccc-ccccccccc-----ccccccccCCceeeeecCCC-
Confidence 56788999999999999999999999873 357899999 998877766 55677776 5665322111
Q ss_pred cCCCCccccEEEe-----ceeeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCce
Q 013309 130 WKGLNRRRWLYFN-----RVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMH 204 (445)
Q Consensus 130 ~~~~~~~~~i~~~-----~~~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~ 204 (445)
..+.|. ...+++|.|+-.-| ....+.+.|..-.+|+++++.|.|-...+
T Consensus 129 -------n~lvfn~p~~g~ls~~ti~~nk~~d-------------------s~qg~qvs~~gg~dvsv~~i~fsn~~g~g 182 (542)
T 2x3h_A 129 -------NYLVFNNPRTGRLSNITVESNKATD-------------------TTQGQQVSLAGGSDVTVSDVNFSNVKGTG 182 (542)
T ss_dssp -------CCEEEESCEEEEEEEEEEECCCSST-------------------TCBCCSEEEESCEEEEEEEEEEEEECSBE
T ss_pred -------CEEEEeCCCCcceeeEEEecccCCc-------------------cccceEEEecCCCcceEeeeeeeecCCCc
Confidence 223332 34667776631100 11223478888899999999999876555
Q ss_pred eEEEc------eecEEEEeEEEECCCCCCC-CCcee-eeceecEEEEeeEEec--CCccEEEeCCceeEEEEeeEE
Q 013309 205 IAFTN------CLRVVISNLEVIAPAESPN-TDGIH-ISASRGVEVKNSIVGT--GDDCISIVGNSSLIRIRNFAC 270 (445)
Q Consensus 205 i~~~~------~~nv~I~n~~I~~~~~~~n-~DGi~-~~~s~nv~I~n~~i~~--gdD~i~i~~~~~ni~I~n~~~ 270 (445)
+.+.. -+...|++++=.-.....| .-|.- .+++.|-+|++...++ .-.++-++...+.-.|+|+.-
T Consensus 183 fsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~a~ynivsnvig 258 (542)
T 2x3h_A 183 FSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIG 258 (542)
T ss_dssp EEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEE
T ss_pred eeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhh
Confidence 44321 2445677766543332222 23444 4578899999988887 345677777554444555543
No 61
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.07 E-value=4.8e-05 Score=74.75 Aligned_cols=158 Identities=14% Similarity=0.135 Sum_probs=91.0
Q ss_pred eeEEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEE-eecceEEeceEEEcC------CCceeEEEceecEEEEe
Q 013309 145 NHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFH-KCKNLKVQNLRVVNS------QQMHIAFTNCLRVVISN 217 (445)
Q Consensus 145 ~nv~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~-~~~nv~I~~v~i~ns------~~~~i~~~~~~nv~I~n 217 (445)
..+.|...-||+|+|..-- -....|.+. .++||.|++++|++. ...+|.+..+++|.|++
T Consensus 102 ~~l~v~snkTI~G~G~~~~-------------i~G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDH 168 (359)
T 1idk_A 102 LGITVTSNKSLIGEGSSGA-------------IKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDH 168 (359)
T ss_dssp SCEEECSSEEEEECTTTCE-------------EESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEES
T ss_pred ceEEeCCCceEEEecCCeE-------------EecceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEe
Confidence 3466655668888763110 011237776 788888888888862 23567888888888888
Q ss_pred EEEECCCCCCCCCcee---eeceecEEEEeeEEecCC---------c--cEEEeCCceeEEEEeeEEcCCc--eEEEeec
Q 013309 218 LEVIAPAESPNTDGIH---ISASRGVEVKNSIVGTGD---------D--CISIVGNSSLIRIRNFACGPGH--GISIGSL 281 (445)
Q Consensus 218 ~~I~~~~~~~n~DGi~---~~~s~nv~I~n~~i~~gd---------D--~i~i~~~~~ni~I~n~~~~~~~--gi~igs~ 281 (445)
|++... .|+.. ...+++|+|++|.|...+ + ...+...+.+|++.++.+.+.. .=++.
T Consensus 169 cs~s~~-----~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r-- 241 (359)
T 1idk_A 169 VTTARI-----GRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ-- 241 (359)
T ss_dssp CEEEEE-----SSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC--
T ss_pred eEeecC-----CCCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCCCeEEEceEeecCcccCcccc--
Confidence 888752 23332 345778888888887422 1 1223333568888888775321 11110
Q ss_pred CCcCCCccEEeEEEEcEEEeCC-cceEEEEEecCCCceeeeEEEEeEEEecCCccE
Q 013309 282 GKSNSSVRIHDIMVYGALISNT-QNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPI 336 (445)
Q Consensus 282 g~~~~~~~v~nv~i~n~~~~~~-~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~~i 336 (445)
.-+.+++.|+.+.+. .+|+.+. . -..+.+|++.+++.+.|+
T Consensus 242 -------~g~~~hv~NN~~~n~~~~~i~~~--~-----~~~i~~e~N~F~~~~~p~ 283 (359)
T 1idk_A 242 -------DNTLLHAVNNYWYDISGHAFEIG--E-----GGYVLAEGNVFQNVDTVL 283 (359)
T ss_dssp -------TTCEEEEESCEEEEEEEEEEEEC--T-----TCEEEEESCEEEEEEEEE
T ss_pred -------CCceEEEECCEEecccceEEecc--C-----CcEEEEEccEEECCCCce
Confidence 112577777777663 2344332 1 135666666666544443
No 62
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.07 E-value=1.4e-05 Score=79.51 Aligned_cols=100 Identities=15% Similarity=0.138 Sum_probs=70.5
Q ss_pred ceeEEEceecEEEEeEEEECCCC---------------CCCCCceeeeceecEEEEeeEEecC-----------------
Q 013309 203 MHIAFTNCLRVVISNLEVIAPAE---------------SPNTDGIHISASRGVEVKNSIVGTG----------------- 250 (445)
Q Consensus 203 ~~i~~~~~~nv~I~n~~I~~~~~---------------~~n~DGi~~~~s~nv~I~n~~i~~g----------------- 250 (445)
.++.+.. +||.|+|++|+...+ ....|+|.+..++||.|++|.|..+
T Consensus 143 ~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~ 221 (399)
T 2o04_A 143 GNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH 221 (399)
T ss_dssp CEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeec
Confidence 3455555 777777777765321 1357999999999999999999864
Q ss_pred -CccEEEeCCceeEEEEeeEEcCCc-eEEEeecCCcCCCccEEeEEEEcEEEeCC
Q 013309 251 -DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNT 303 (445)
Q Consensus 251 -dD~i~i~~~~~ni~I~n~~~~~~~-gi~igs~g~~~~~~~v~nv~i~n~~~~~~ 303 (445)
|..+.++.++.+|+|+||.|.+.. +.-+|+--.........+|+|.++.|.+.
T Consensus 222 ~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 222 HDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp CCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred cccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCC
Confidence 667888888999999999997533 46666521000011234799999998764
No 63
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.90 E-value=0.00043 Score=67.58 Aligned_cols=76 Identities=12% Similarity=0.129 Sum_probs=44.1
Q ss_pred eecceEEeceEEEcCCC------------------c--eeEE-EceecEEEEeEEEECCCCCCCCCceeeeceecEEEEe
Q 013309 186 KCKNLKVQNLRVVNSQQ------------------M--HIAF-TNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKN 244 (445)
Q Consensus 186 ~~~nv~I~~v~i~ns~~------------------~--~i~~-~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n 244 (445)
.+++++++|++|+|... . .+.+ ..++++.+.+|.|.. ..|.+..... ...+++
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G-----~QDTLy~~~g-r~~~~~ 167 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG-----YQATLYVSGG-RSFFSD 167 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC-----STTCEEECSS-EEEEES
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec-----ccceEEECCC-CEEEEc
Confidence 58899999999998741 1 2221 346666677777765 3445555433 456666
Q ss_pred eEEecCCccEEEeCCceeEEEEeeEE
Q 013309 245 SIVGTGDDCISIVGNSSLIRIRNFAC 270 (445)
Q Consensus 245 ~~i~~gdD~i~i~~~~~ni~I~n~~~ 270 (445)
|.|...-|-| ++ .....++||++
T Consensus 168 c~I~G~vDFI-FG--~a~a~f~~c~i 190 (342)
T 2nsp_A 168 CRISGTVDFI-FG--DGTALFNNCDL 190 (342)
T ss_dssp CEEEESEEEE-EE--SSEEEEESCEE
T ss_pred CEEEeceEEE-eC--CceEEEecCEE
Confidence 6666543432 12 22466666665
No 64
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.64 E-value=0.00059 Score=68.18 Aligned_cols=134 Identities=9% Similarity=0.074 Sum_probs=89.4
Q ss_pred EEEEEeecceEEeceEEEcC-------------------CCceeEEEceecEEEEeEEEECCCC------------CCCC
Q 013309 181 AITFHKCKNLKVQNLRVVNS-------------------QQMHIAFTNCLRVVISNLEVIAPAE------------SPNT 229 (445)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns-------------------~~~~i~~~~~~nv~I~n~~I~~~~~------------~~n~ 229 (445)
.|.+..++||.|++++|++. ....|.+..+++|-|++|++....+ ..-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 47888999999999999863 2356899999999999999986321 0124
Q ss_pred Cc-eeee-ceecEEEEeeEEecCCccEEEeCC--------ceeEEEEeeEEcCCc--eEEEeecCCcCCCccEEeEEEEc
Q 013309 230 DG-IHIS-ASRGVEVKNSIVGTGDDCISIVGN--------SSLIRIRNFACGPGH--GISIGSLGKSNSSVRIHDIMVYG 297 (445)
Q Consensus 230 DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~~~--------~~ni~I~n~~~~~~~--gi~igs~g~~~~~~~v~nv~i~n 297 (445)
|| +++. .+++|+|++|.|...+-++-+++. .-+|++.+|.+.+.. .=.+. . -.+++-|
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~R-------~---G~~Hv~N 298 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRVR-------F---GQVHIYN 298 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEES-------S---CEEEEES
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCcccc-------c---ceEEEEc
Confidence 65 4565 589999999999976555555542 136999999885321 12221 1 1478889
Q ss_pred EEEeCCc-------ceEEEEEecCCCceeeeEEEEeEEEec
Q 013309 298 ALISNTQ-------NGVRIKTWQGGSGSATNIQFLDVLMKN 331 (445)
Q Consensus 298 ~~~~~~~-------~gi~i~~~~g~~g~v~ni~~~ni~~~~ 331 (445)
+.+.+.. +++... .+ ..|.+|++.++.
T Consensus 299 N~~~n~~~~~~~~~ya~g~~--~~-----~~i~~E~N~F~~ 332 (416)
T 1vbl_A 299 NYYEFSNLADYDFQYAWGVG--VF-----SQIYAQNNYFSF 332 (416)
T ss_dssp CEEEECTTSSSCCCCSEEEE--TT-----CEEEEESCEEEE
T ss_pred ceEECCCCCcccceeEeccC--CC-----cEEEEECCEEEC
Confidence 9887532 344332 11 246666666664
No 65
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.63 E-value=0.00099 Score=65.27 Aligned_cols=93 Identities=15% Similarity=0.105 Sum_probs=62.3
Q ss_pred CCceeEEEceecEEEEeEEEECCCC---------C---CCCCc-eeee-ceecEEEEeeEEecCCccEEEeCC-------
Q 013309 201 QQMHIAFTNCLRVVISNLEVIAPAE---------S---PNTDG-IHIS-ASRGVEVKNSIVGTGDDCISIVGN------- 259 (445)
Q Consensus 201 ~~~~i~~~~~~nv~I~n~~I~~~~~---------~---~n~DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~~~------- 259 (445)
...+|.+..+++|.|++|++....+ + .-.|| +++. .+++|+|++|.|...+-+.-+++.
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d 211 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQD 211 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccc
Confidence 3567889999999999999985311 0 01466 4555 589999999999986666555542
Q ss_pred --ceeEEEEeeEEcCCc--eEEEeecCCcCCCccEEeEEEEcEEEeCC
Q 013309 260 --SSLIRIRNFACGPGH--GISIGSLGKSNSSVRIHDIMVYGALISNT 303 (445)
Q Consensus 260 --~~ni~I~n~~~~~~~--gi~igs~g~~~~~~~v~nv~i~n~~~~~~ 303 (445)
..+|++.+|.+.+.. .=++. . -.+++.|+.+.+.
T Consensus 212 ~g~~~vT~hhN~f~~~~~R~PrvR-------~---G~~Hv~NN~~~~~ 249 (355)
T 1pcl_A 212 SGKLRVTFHNNVFDRVTERAPRVR-------F---GSIHAYNNVYLGD 249 (355)
T ss_pred cCcceEEEECcEEeCCcccCCcee-------c---ceEEEEcceEEcc
Confidence 127999999886432 21111 0 1377888888654
No 66
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.46 E-value=0.00054 Score=68.44 Aligned_cols=140 Identities=10% Similarity=0.023 Sum_probs=96.9
Q ss_pred EEEEEeecceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCCCCCCCceeeece-ecEEEEeeEEecC---------
Q 013309 181 AITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISAS-RGVEVKNSIVGTG--------- 250 (445)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s-~nv~I~n~~i~~g--------- 250 (445)
.|.+ ...+++|++++|.|....+|.+.. .+.+|++|+|... ...||.+... .+.+|++|.+...
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 3555 789999999999998877888886 6788999999973 2349999874 4899999999753
Q ss_pred CccEEEeCC-ceeEEEEeeEEcCC--ceEEEeecCCcCCCccEEeEEEEcEEEeCCcc-------------eEEEEEecC
Q 013309 251 DDCISIVGN-SSLIRIRNFACGPG--HGISIGSLGKSNSSVRIHDIMVYGALISNTQN-------------GVRIKTWQG 314 (445)
Q Consensus 251 dD~i~i~~~-~~ni~I~n~~~~~~--~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~-------------gi~i~~~~g 314 (445)
.|+++++.. .++.+|++|+++.. .|+.+.. ....++|+||...+..+ |+.+.
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~--------~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lg---- 250 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFD--------SPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLG---- 250 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEECTT--------CCSCCEEESCEEESTTCCCSCCTTCCCCCCSEECC----
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEEEe--------cCCCEEEEeEEEECCccccccccccccCCCCEEEe----
Confidence 267888742 47888999998743 4676631 23457999999876432 33332
Q ss_pred CCceeeeEEEEeEEEecC-CccEEE
Q 013309 315 GSGSATNIQFLDVLMKNV-SNPIII 338 (445)
Q Consensus 315 ~~g~v~ni~~~ni~~~~~-~~~i~i 338 (445)
+.....+.+++|+...+. ..+|..
T Consensus 251 g~~~~~~~~v~nn~a~~N~~~G~~~ 275 (400)
T 1ru4_A 251 GNQAVGNHRITRSVAFGNVSKGFDQ 275 (400)
T ss_dssp CTTCCCCCEEESCEEESCSSEEEEC
T ss_pred ccCCcCCEEEEeeEEECCcCcCEee
Confidence 112345667777666544 345443
No 67
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.42 E-value=0.00052 Score=68.22 Aligned_cols=112 Identities=11% Similarity=0.118 Sum_probs=78.3
Q ss_pred EEEEEeecceEEeceEEEcC-------------------CCceeEEEceecEEEEeEEEECCCCC------------CCC
Q 013309 181 AITFHKCKNLKVQNLRVVNS-------------------QQMHIAFTNCLRVVISNLEVIAPAES------------PNT 229 (445)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns-------------------~~~~i~~~~~~nv~I~n~~I~~~~~~------------~n~ 229 (445)
.|.+.. +||.|++++|++. ....|.+..+++|-|++|++....+. .-.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 477878 9999999999863 23568999999999999999863210 124
Q ss_pred Cc-eeee-ceecEEEEeeEEecCCccEEEeCC--------ceeEEEEeeEEcCCc--eEEEeecCCcCCCccEEeEEEEc
Q 013309 230 DG-IHIS-ASRGVEVKNSIVGTGDDCISIVGN--------SSLIRIRNFACGPGH--GISIGSLGKSNSSVRIHDIMVYG 297 (445)
Q Consensus 230 DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~~~--------~~ni~I~n~~~~~~~--gi~igs~g~~~~~~~v~nv~i~n 297 (445)
|| +++. .+++|+|++|.|...+-+.-+++. ..+|++.+|.+.+.. .=.+. . -.+++-|
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R-------~---G~~Hv~N 292 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR-------F---GQVHVYN 292 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES-------S---CEEEEES
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc-------c---ceEEEEc
Confidence 65 4665 589999999999976555555442 138999999885321 11221 1 1488889
Q ss_pred EEEeCC
Q 013309 298 ALISNT 303 (445)
Q Consensus 298 ~~~~~~ 303 (445)
+.+.+.
T Consensus 293 N~~~n~ 298 (399)
T 2o04_A 293 NYYEGS 298 (399)
T ss_dssp CEEECC
T ss_pred ceEECC
Confidence 998764
No 68
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.06 E-value=0.0072 Score=58.34 Aligned_cols=94 Identities=15% Similarity=0.187 Sum_probs=62.1
Q ss_pred ceeeeceecEEEEeeEEec----CCccEEEeCCceeEEEEeeEEcCC----------ce-EEEeecCCcCCCccEEeEEE
Q 013309 231 GIHISASRGVEVKNSIVGT----GDDCISIVGNSSLIRIRNFACGPG----------HG-ISIGSLGKSNSSVRIHDIMV 295 (445)
Q Consensus 231 Gi~~~~s~nv~I~n~~i~~----gdD~i~i~~~~~ni~I~n~~~~~~----------~g-i~igs~g~~~~~~~v~nv~i 295 (445)
||.+..++||.|+|+.|+. +.|+|.+...++||.|.+|++..+ +| +.+. ....+|||
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~--------~~s~~VTI 167 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMK--------RNAEYITV 167 (326)
T ss_dssp CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEEC--------TTCEEEEE
T ss_pred EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEec--------CCCceEEE
Confidence 4555555666666666654 479999987689999999999532 23 4442 23579999
Q ss_pred EcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecC
Q 013309 296 YGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNV 332 (445)
Q Consensus 296 ~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~ 332 (445)
+||.|.+...+..+...+.....-.+|||-++.+.+.
T Consensus 168 Snn~f~~h~k~~LiG~sd~~~~~~~~vT~~~N~f~~~ 204 (326)
T 3vmv_A 168 SWNKFENHWKTMLVGHTDNASLAPDKITYHHNYFNNL 204 (326)
T ss_dssp ESCEEEEEEECEEECSSSCGGGCCEEEEEESCEEEEE
T ss_pred EceEEecCceEEEECCCCCCcccCccEEEEeeEecCC
Confidence 9999998766666654322110014688887777653
No 69
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.86 E-value=0.055 Score=47.25 Aligned_cols=128 Identities=20% Similarity=0.253 Sum_probs=71.8
Q ss_pred cEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEec-CCccEEEeCCceeEEEEeeEEcCCce--EEEeecCCcCCCc
Q 013309 212 RVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGT-GDDCISIVGNSSLIRIRNFACGPGHG--ISIGSLGKSNSSV 288 (445)
Q Consensus 212 nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i~~~~~ni~I~n~~~~~~~g--i~igs~g~~~~~~ 288 (445)
+.+++|+.|-. +..||||..+ +.+|+|+.... +.|++.+++ ...++|.+.-..++.. |..-.
T Consensus 53 GaTLkNvIIG~----~~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~Ng-------- 117 (196)
T 3t9g_A 53 GANLKNVIIGA----PGCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQLNA-------- 117 (196)
T ss_dssp TCEEEEEEECS----CCTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEECS--------
T ss_pred CCEEEEEEECC----CCcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEECC--------
Confidence 44566666644 3567787764 56777777765 778887775 4456666554443322 33311
Q ss_pred cEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCCccEEEEeeeCCCCCCCCCCCCcceEEEEEEEeEEE
Q 013309 289 RIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKVENITFIHIKG 368 (445)
Q Consensus 289 ~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~f~ni~~ 368 (445)
--.+.|+|.++.+ .|-..++- |.-..-++|.++|+++.+++..+. +. ++ ......+.|+..+|+.-
T Consensus 118 -~Gtv~I~nF~~~~--~GKl~RSC-Gnc~~~r~v~i~~v~~~n~k~~l~-rt---dS------~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 118 -PCTFKVKNFTATN--IGKLVRQN-GNTTFKVVIYLEDVTLNNVKSCVA-KS---DS------PVSELWYHNLNVNNCKT 183 (196)
T ss_dssp -SEEEEEEEEEEEE--EEEEEEEC-TTCCSCEEEEEEEEEEEEEEEEEE-EC---CC------TTCEEEEEEEEEEEEEE
T ss_pred -CceEEEeeEEEcc--CCEEEEcC-CCCCceeEEEEeCeEEeCCEEEEE-Ec---CC------CCCEEEEecceecCCCc
Confidence 1245566666544 34344432 222344677777777777654432 21 11 23456778888877764
No 70
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=96.78 E-value=0.0031 Score=61.78 Aligned_cols=112 Identities=15% Similarity=0.192 Sum_probs=77.4
Q ss_pred EEEE---EeecceEEeceEEEcCC---------------CceeEEEc-eecEEEEeEEEECCCCC------------CCC
Q 013309 181 AITF---HKCKNLKVQNLRVVNSQ---------------QMHIAFTN-CLRVVISNLEVIAPAES------------PNT 229 (445)
Q Consensus 181 ~i~~---~~~~nv~I~~v~i~ns~---------------~~~i~~~~-~~nv~I~n~~I~~~~~~------------~n~ 229 (445)
.|.+ .+++||.|++++|++.. ...|.+.. +++|-|++|++....+. .-.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 3777 68999999999999631 34799999 99999999999863210 124
Q ss_pred Cc-eeee-ceecEEEEeeEEecCCccEEEeCC---------ceeEEEEeeEEcCCc--eEEEeecCCcCCCccEEeEEEE
Q 013309 230 DG-IHIS-ASRGVEVKNSIVGTGDDCISIVGN---------SSLIRIRNFACGPGH--GISIGSLGKSNSSVRIHDIMVY 296 (445)
Q Consensus 230 DG-i~~~-~s~nv~I~n~~i~~gdD~i~i~~~---------~~ni~I~n~~~~~~~--gi~igs~g~~~~~~~v~nv~i~ 296 (445)
|| +++. .+++|+|++|.|..-+-++-+++. .-+|++.+|.+.+.. .=.+ .. -.+++.
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~-------R~---G~~Hv~ 253 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRV-------RY---GSIHSF 253 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEE-------SS---CEEEEE
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCccc-------cc---ceEEEE
Confidence 65 5665 589999999999875555545442 126999999885321 1111 01 137888
Q ss_pred cEEEeC
Q 013309 297 GALISN 302 (445)
Q Consensus 297 n~~~~~ 302 (445)
|+.+.+
T Consensus 254 NN~~~~ 259 (361)
T 1pe9_A 254 NNVFKG 259 (361)
T ss_dssp SCEEEE
T ss_pred cceEec
Confidence 888854
No 71
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.72 E-value=0.077 Score=46.32 Aligned_cols=132 Identities=14% Similarity=0.149 Sum_probs=96.2
Q ss_pred cceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEe
Q 013309 188 KNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRN 267 (445)
Q Consensus 188 ~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n 267 (445)
...+|+|+.|-.+...+||.. .+.+|+|++... -..|.+.+.++..++|.+.-.++.+|=|--..+...+.|+|
T Consensus 52 ~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwed----VcEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 125 (196)
T 3t9g_A 52 KGANLKNVIIGAPGCDGIHCY--GDNVVENVVWED----VGEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVKN 125 (196)
T ss_dssp TTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESS----CCSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEEE
T ss_pred CCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeee----eeceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEee
Confidence 688999999977777888885 467899999987 46788888887788999998888777766666678899998
Q ss_pred eEEcCCceEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCCc
Q 013309 268 FACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSN 334 (445)
Q Consensus 268 ~~~~~~~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~ 334 (445)
.++.+ .|--.-|.|.- ..=++|.++|+++.+....+ +++.. .-..+++.|+++.+++.
T Consensus 126 F~~~~-~GKl~RSCGnc---~~~r~v~i~~v~~~n~k~~l-~rtdS----~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 126 FTATN-IGKLVRQNGNT---TFKVVIYLEDVTLNNVKSCV-AKSDS----PVSELWYHNLNVNNCKT 183 (196)
T ss_dssp EEEEE-EEEEEEECTTC---CSCEEEEEEEEEEEEEEEEE-EECCC----TTCEEEEEEEEEEEEEE
T ss_pred EEEcc-CCEEEEcCCCC---CceeEEEEeCeEEeCCEEEE-EEcCC----CCCEEEEecceecCCCc
Confidence 87753 45444455432 23479999999998875443 44432 23577788888877643
No 72
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.71 E-value=0.0031 Score=62.33 Aligned_cols=76 Identities=17% Similarity=0.205 Sum_probs=50.3
Q ss_pred EEEEeecceEEe-ceEEEcCCCceeEEEceecEEEEeEEEECCCCCC-CCCceee------eceecEEEEeeEEecCCcc
Q 013309 182 ITFHKCKNLKVQ-NLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESP-NTDGIHI------SASRGVEVKNSIVGTGDDC 253 (445)
Q Consensus 182 i~~~~~~nv~I~-~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~~-n~DGi~~------~~s~nv~I~n~~i~~gdD~ 253 (445)
+++..|++++++ ++.+. ++|+||.|.||.|...++.- -.-|.-. ..|++++ ..+
T Consensus 198 IhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~---------hga 259 (514)
T 2vbk_A 198 SKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR---------SEA 259 (514)
T ss_dssp EEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---------CEE
T ss_pred EeEeccCceecccCcccc---------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---------ccc
Confidence 788889888887 66664 37999999999999865421 1112221 1255555 445
Q ss_pred EEEeC-----Ccee-EEEEeeEEcCCce
Q 013309 254 ISIVG-----NSSL-IRIRNFACGPGHG 275 (445)
Q Consensus 254 i~i~~-----~~~n-i~I~n~~~~~~~g 275 (445)
|.+++ |.+| |+|++|.+....-
T Consensus 260 v~igSE~m~~Gvk~~v~v~~Clf~~td~ 287 (514)
T 2vbk_A 260 IILDSETMCIGFKNAVYVHDCLDLHMEQ 287 (514)
T ss_dssp EEEESSEEEESCSEEEEESCCEEEEEES
T ss_pred EEECchhhcccccccEEEEeeeccCCcc
Confidence 66665 3678 9999998865443
No 73
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=96.64 E-value=0.062 Score=53.26 Aligned_cols=47 Identities=17% Similarity=0.156 Sum_probs=30.8
Q ss_pred cHHHHHHHHHHHcC--CCCCcEEEEcCCcEEEeeeeeecCCCCCCeeEeEee
Q 013309 70 DTEAFANAWKKACS--FPARTKIVFSAGYTFLIHPIDISGPCKSRLTLEISG 119 (445)
Q Consensus 70 dT~Aiq~Ai~~a~~--~~gg~~v~~P~G~~Yl~~~l~l~~~~~s~v~l~~~G 119 (445)
+-.-||+||++|.. .....+|+|.+| +|.- .|.+.. .+.+++|+++|
T Consensus 88 ~f~TIqeAVdaap~~~~~~r~vI~Ik~G-vY~E-~V~Ip~-~K~~ItL~G~G 136 (422)
T 3grh_A 88 THTTIQAAVDAAIIKRTNKRQYIAVMPG-EYQG-TVYVPA-APGGITLYGTG 136 (422)
T ss_dssp CBSSHHHHHHHHHTTCCSSCEEEEECSE-EEES-CEEECC-CSSCEEEEECS
T ss_pred CcCCHHHHHHhchhcCCCccEEEEEeCC-eEee-eEEecC-CCCcEEEEecc
Confidence 45569999997643 233468999999 9974 355511 15677777665
No 74
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=96.64 E-value=0.059 Score=47.20 Aligned_cols=28 Identities=25% Similarity=0.533 Sum_probs=13.9
Q ss_pred CCCceeeeceecEEEEeeEEec-CCccEEEe
Q 013309 228 NTDGIHISASRGVEVKNSIVGT-GDDCISIV 257 (445)
Q Consensus 228 n~DGi~~~~s~nv~I~n~~i~~-gdD~i~i~ 257 (445)
..||||..+ +.+|+|+.... +.|++.++
T Consensus 61 ~~dGIHC~G--~CtleNVwwedVcEDA~T~k 89 (197)
T 1ee6_A 61 AADGVHCYG--DCTITNVIWEDVGEDALTLK 89 (197)
T ss_dssp CTTCEEEES--CEEEEEEEESSCCSCSEEEE
T ss_pred CcccEEEcC--ceeEEEEEeeeccccccEEc
Confidence 345555543 34555555543 45555555
No 75
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.75 E-value=0.056 Score=55.32 Aligned_cols=140 Identities=8% Similarity=0.011 Sum_probs=96.1
Q ss_pred eecceEEeceEEEcC-CCceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecC-----CccEEEeCC
Q 013309 186 KCKNLKVQNLRVVNS-QQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTG-----DDCISIVGN 259 (445)
Q Consensus 186 ~~~nv~I~~v~i~ns-~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g-----dD~i~i~~~ 259 (445)
...+.+|++-.+.+. ....+....+.+.+|++.++.. +..||.+..+.+.+|+++.|... ..+|.+..
T Consensus 226 ~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~-----~~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~- 299 (506)
T 1dbg_A 226 DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLN-----CQGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG- 299 (506)
T ss_dssp CBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEES-----CSSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-
T ss_pred ccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEc-----ccCcEEEeecCccEEECCEEECCcCccCceEEEEEC-
Confidence 357888888777754 3455666666678899999886 23479888888889999998764 35677754
Q ss_pred ceeEEEEeeEEcCCc--------eEEEeecCCc-CCCccEEeEEEEcEEEeCCcc-eEEEEEe----------c-CCCce
Q 013309 260 SSLIRIRNFACGPGH--------GISIGSLGKS-NSSVRIHDIMVYGALISNTQN-GVRIKTW----------Q-GGSGS 318 (445)
Q Consensus 260 ~~ni~I~n~~~~~~~--------gi~igs~g~~-~~~~~v~nv~i~n~~~~~~~~-gi~i~~~----------~-g~~g~ 318 (445)
. +.+|+|+.+.+.. ||.+.. |.. .....+++++|++++|.+... ||.+..+ . .....
T Consensus 300 ~-~~~I~nN~f~~~~g~~~~~~~GI~i~~-G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~ 377 (506)
T 1dbg_A 300 S-RHVIACNYFELSETIKSRGNAALYLNP-GAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFET 377 (506)
T ss_dssp B-SCEEESCEEEESSBCGGGTSEEEEECC-BCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBC
T ss_pred C-CCEEECCEEECCcCccccccccEEEec-CCCccccccccCcEEECCEEECCccccEEEcccccccccccccccccccC
Confidence 3 4499999886532 666632 110 013457899999999999986 9998710 0 11134
Q ss_pred eeeEEEEeEEEecCC
Q 013309 319 ATNIQFLDVLMKNVS 333 (445)
Q Consensus 319 v~ni~~~ni~~~~~~ 333 (445)
-.|++|.|.-+.+..
T Consensus 378 p~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 378 PHQLMLKGNLFFKDK 392 (506)
T ss_dssp CCSEEEESCEEECCS
T ss_pred CCcEEEEccEEEcCC
Confidence 568999988887654
No 76
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=95.50 E-value=0.29 Score=47.00 Aligned_cols=111 Identities=11% Similarity=0.044 Sum_probs=77.6
Q ss_pred ceecEEEEeEEEECCCCC--CCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcCCceEEEeecCCcCC
Q 013309 209 NCLRVVISNLEVIAPAES--PNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNS 286 (445)
Q Consensus 209 ~~~nv~I~n~~I~~~~~~--~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~~~gi~igs~g~~~~ 286 (445)
..++++++|++|.+.... ...-++.+. ++++.+.||.|...-|.+..+. .+ ..++||.+.+.-.+-+|.
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~------ 162 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDSLYVHS-NR-QFFINCFIAGTVDFIFGN------ 162 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTCEEECS-SE-EEEESCEEEESSSCEEES------
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECccceeeeecC-cc-EEEEecEEEeeeeEEecC------
Confidence 588999999999985422 234567664 6889999999999888888876 34 499999998766666665
Q ss_pred CccEEeEEEEcEEEeCCc----ceEEEEEecCC--CceeeeEEEEeEEEecCC
Q 013309 287 SVRIHDIMVYGALISNTQ----NGVRIKTWQGG--SGSATNIQFLDVLMKNVS 333 (445)
Q Consensus 287 ~~~v~nv~i~n~~~~~~~----~gi~i~~~~g~--~g~v~ni~~~ni~~~~~~ 333 (445)
....|+||++.... ..-.| +.+++ ...-...+|.|+++....
T Consensus 163 ----~~a~f~~c~i~~~~~~~~~~~~i-tA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 163 ----AAVVLQDCDIHARRPGSGQKNMV-TAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp ----CEEEEESCEEEECCCSTTCCEEE-EEECCCSTTCCCEEEEESCEEEECT
T ss_pred ----CcEEEEeeEEEEecCCCCCceEE-EeCCCCCCCCCceEEEECCEEecCC
Confidence 14789999986532 11123 22332 234567889999997543
No 77
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.10 E-value=0.27 Score=47.20 Aligned_cols=113 Identities=9% Similarity=0.045 Sum_probs=78.5
Q ss_pred eEEEceecEEEEeEEEECCCCC--CCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEcCCceEEEeecC
Q 013309 205 IAFTNCLRVVISNLEVIAPAES--PNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLG 282 (445)
Q Consensus 205 i~~~~~~nv~I~n~~I~~~~~~--~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~~~gi~igs~g 282 (445)
+.+ .+++++++|++|.+.... ...-++.+. ++++.+.||.|...-|.+..+. .++ .++||.+.+.-.+-+|.
T Consensus 85 v~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r~-~~~~c~I~G~vDFIfG~-- 158 (317)
T 1xg2_A 85 LAA-VGQGFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDTLYAHS-QRQ-FYRDSYVTGTVDFIFGN-- 158 (317)
T ss_dssp EEE-CSTTCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTCEEECS-SEE-EEESCEEEESSSCEEEC--
T ss_pred EEE-ECCCEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccceeecC-ccE-EEEeeEEEeceeEEcCC--
Confidence 444 688999999999985422 234567664 6789999999999888888876 344 89999998766676665
Q ss_pred CcCCCccEEeEEEEcEEEeCCcc----eEEEEEecCC--CceeeeEEEEeEEEecC
Q 013309 283 KSNSSVRIHDIMVYGALISNTQN----GVRIKTWQGG--SGSATNIQFLDVLMKNV 332 (445)
Q Consensus 283 ~~~~~~~v~nv~i~n~~~~~~~~----gi~i~~~~g~--~g~v~ni~~~ni~~~~~ 332 (445)
....|+||++..... .-.| +.+++ ...-....|.|+++...
T Consensus 159 --------~~avf~~c~i~~~~~~~~~~~~i-tA~~r~~~~~~~G~vf~~c~i~~~ 205 (317)
T 1xg2_A 159 --------AAVVFQKCQLVARKPGKYQQNMV-TAQGRTDPNQATGTSIQFCNIIAS 205 (317)
T ss_dssp --------CEEEEESCEEEECCCSTTCCEEE-EEECCCCTTSCCEEEEESCEEEEC
T ss_pred --------ceEEEeeeEEEEeccCCCCccEE-EecCcCCCCCCcEEEEECCEEecC
Confidence 148899999865321 1123 22232 23456788999999754
No 78
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=95.07 E-value=0.3 Score=42.77 Aligned_cols=131 Identities=15% Similarity=0.139 Sum_probs=88.0
Q ss_pred cceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCCCCCCCceeeeceecEEEEeeEEecCCccEEEeCCceeEEEEe
Q 013309 188 KNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRN 267 (445)
Q Consensus 188 ~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n 267 (445)
+..+|+|+.|-.+...+||... +.+|+|++... -..|.+.+.++..++|.+.-.++.+|=|--..+...+.|+|
T Consensus 48 ~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwed----VcEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 121 (197)
T 1ee6_A 48 AGASLKNVVIGAPAADGVHCYG--DCTITNVIWED----VGEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRN 121 (197)
T ss_dssp TTEEEEEEEECSSCTTCEEEES--CEEEEEEEESS----CCSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEES
T ss_pred CCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeee----ccccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEee
Confidence 6889999999877888998864 58899999987 46788888877788888888888777665566677788888
Q ss_pred eEEcCCceEEEeecCCcCCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCC
Q 013309 268 FACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVS 333 (445)
Q Consensus 268 ~~~~~~~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~ 333 (445)
.++. ..|=-.-|.|.- ..-++|.|+|+++.+....|.....++ ..+++.|....++.
T Consensus 122 F~~~-~~GKl~RScGnc---~~~r~v~i~~v~~~~~k~~i~~~ds~g-----dtati~n~~~~~v~ 178 (197)
T 1ee6_A 122 FRAD-DIGKLVRQNGGT---TYKVVMNVENCNISRVKDAILRTDSST-----STGRIVNTRYSNVP 178 (197)
T ss_dssp CEEE-EEEEEEEECTTC---CSCEEEEEESCEEEEEEEEEEECCCTT-----CEEEEESCEEESCS
T ss_pred EEEc-cCCEEEEcCCCC---ccceEEEEeceEEECceEEEEEecCCC-----CEEEEEecccCCcc
Confidence 6653 234333343322 122688888888877644332221122 34556665555543
No 79
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=94.78 E-value=1.2 Score=42.34 Aligned_cols=49 Identities=20% Similarity=0.192 Sum_probs=30.2
Q ss_pred EEEEeEEEECCCCCCCCCceeee-ceecEEEEeeEEec-CCccEEEeCCceeEEEEeeE
Q 013309 213 VVISNLEVIAPAESPNTDGIHIS-ASRGVEVKNSIVGT-GDDCISIVGNSSLIRIRNFA 269 (445)
Q Consensus 213 v~I~n~~I~~~~~~~n~DGi~~~-~s~nv~I~n~~i~~-gdD~i~i~~~~~ni~I~n~~ 269 (445)
.+++|+.|-. +..||||.. + +.+|+|+.... +.|++.+++ ..+.|.+.-
T Consensus 160 atlkNvIiG~----~~~dGIHC~~G--~CtleNVwwedVcEDA~T~kg--~~~~I~GGg 210 (344)
T 3b4n_A 160 TVKNLRISAS----GGADGIHCDSG--NCTIENVIWEDICEDAATNNG--KTMTIVGGI 210 (344)
T ss_dssp EEEEEEECTT----CCTTCEEEEES--EEEEEEEEESSCSSCSEEECS--SEEEEESCE
T ss_pred cEEEEEEecC----CCccceEEccC--CeeEEEEeehhcccccceecC--ceEEEECch
Confidence 4455555533 357778776 3 46777777765 777777774 245555443
No 80
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=92.73 E-value=0.95 Score=43.80 Aligned_cols=112 Identities=4% Similarity=-0.035 Sum_probs=75.6
Q ss_pred ceecEEEEeEEEECCCC--------------C--CCCCceee-eceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEc
Q 013309 209 NCLRVVISNLEVIAPAE--------------S--PNTDGIHI-SASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACG 271 (445)
Q Consensus 209 ~~~nv~I~n~~I~~~~~--------------~--~n~DGi~~-~~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~ 271 (445)
.+++++++|++|.+... . ...-++.+ ..++++.+.+|.|...-|.+..+. ....++||.+.
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I~ 171 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRIS 171 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECS--SEEEEESCEEE
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECC--CCEEEEcCEEE
Confidence 47899999999987541 1 12224521 247899999999999888888875 46899999998
Q ss_pred CCceEEEeecCCcCCCccEEeEEEEcEEEeCCcc---e-----EEEEEecCCCceeeeEEEEeEEEecC
Q 013309 272 PGHGISIGSLGKSNSSVRIHDIMVYGALISNTQN---G-----VRIKTWQGGSGSATNIQFLDVLMKNV 332 (445)
Q Consensus 272 ~~~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~~---g-----i~i~~~~g~~g~v~ni~~~ni~~~~~ 332 (445)
+.-.+-+|. ....|+||++.-... + -.|.........-..+.|.|+++...
T Consensus 172 G~vDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 172 GTVDFIFGD----------GTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp ESEEEEEES----------SEEEEESCEEEECCCTTSCTTSCCEEEEEECCBTTCSCCEEEESCEEEES
T ss_pred eceEEEeCC----------ceEEEecCEEEEecCcccccccCceEEEccCCCCCCCCEEEEEcCEEecC
Confidence 877777776 258899999864321 1 22322111112334678999999764
No 81
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=91.37 E-value=2.4 Score=41.25 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=78.0
Q ss_pred ceecEEEEeEEEECCCC----------------CCCCCceeee-ceecEEEEeeEEecCCccEEEeCCceeEEEEeeEEc
Q 013309 209 NCLRVVISNLEVIAPAE----------------SPNTDGIHIS-ASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACG 271 (445)
Q Consensus 209 ~~~nv~I~n~~I~~~~~----------------~~n~DGi~~~-~s~nv~I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~ 271 (445)
..++++++|++|.+... ...+-++.+. .+++..+.||.|...-|.+..+. .....+++|.+.
T Consensus 120 ~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I~ 198 (364)
T 3uw0_A 120 NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEIS 198 (364)
T ss_dssp CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEEE
T ss_pred ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEEE
Confidence 56889999999987532 1123356555 47899999999999888888773 467899999999
Q ss_pred CCceEEEeecCCcCCCccEEeEEEEcEEEeCCc------ceEEEEEecCCCceeeeEEEEeEEEecC
Q 013309 272 PGHGISIGSLGKSNSSVRIHDIMVYGALISNTQ------NGVRIKTWQGGSGSATNIQFLDVLMKNV 332 (445)
Q Consensus 272 ~~~gi~igs~g~~~~~~~v~nv~i~n~~~~~~~------~gi~i~~~~g~~g~v~ni~~~ni~~~~~ 332 (445)
+.-.+=+|. -...|+||++.-.. .+-.|.........-..+.|.|+++...
T Consensus 199 GtvDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 199 GHVDFIFGS----------GITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp ESEEEEEES----------SEEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEEC
T ss_pred cCCCEECCc----------ceEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEecC
Confidence 887888876 26789999986421 1122322211122334688999999753
No 82
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=90.54 E-value=1.5 Score=41.65 Aligned_cols=142 Identities=13% Similarity=0.045 Sum_probs=84.0
Q ss_pred EEEEeceEEecCCchhhccccccCCCCCCCCCCeEEEEEeecceEEeceEEEcCCCceeEEEceecEEEEeEEEECCCCC
Q 013309 147 LTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAES 226 (445)
Q Consensus 147 v~I~G~G~IDG~G~~~w~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~I~n~~I~~~~~~ 226 (445)
-+|.| +++||.+..| ...|.. ........|.+.. ..+++++.|-.....+||... .+.+|+|+....
T Consensus 125 ~~i~g-~t~Dgg~k~~-~~~c~~----q~E~q~~vF~le~--GatlkNvIiG~~~~dGIHC~~-G~CtleNVwwed---- 191 (344)
T 3b4n_A 125 ATFEN-RTVDCGGVTI-GTSCPN----DSDKQKPLIILKN--ATVKNLRISASGGADGIHCDS-GNCTIENVIWED---- 191 (344)
T ss_dssp EEEES-SEEECTTCEE-CCCCCT----TCSCCCCSEEEES--CEEEEEEECTTCCTTCEEEEE-SEEEEEEEEESS----
T ss_pred eeEec-ceEcCCCcEE-CCCCCC----ccccCccEEEEcc--CcEEEEEEecCCCccceEEcc-CCeeEEEEeehh----
Confidence 46666 6899988775 333321 1112233455554 578999988777778888762 148899999887
Q ss_pred CCCCceeeeceecEEEEeeEEecC-------CccEEEeCCceeEEEEe-eE-EcCCceEEEeecCCcCCCccEEeEEEEc
Q 013309 227 PNTDGIHISASRGVEVKNSIVGTG-------DDCISIVGNSSLIRIRN-FA-CGPGHGISIGSLGKSNSSVRIHDIMVYG 297 (445)
Q Consensus 227 ~n~DGi~~~~s~nv~I~n~~i~~g-------dD~i~i~~~~~ni~I~n-~~-~~~~~gi~igs~g~~~~~~~v~nv~i~n 297 (445)
-..|.+.+.+ ..++|.+.-.++. +|=|-=+.+...+.|.| .. +....|=-.-|.|.-...+.-++|+|+|
T Consensus 192 VcEDA~T~kg-~~~~I~GGgA~~a~~g~~g~~DKV~Q~Ng~gtv~I~~~~F~~~~~~GKl~RSCGnC~~~~~~R~v~i~n 270 (344)
T 3b4n_A 192 ICEDAATNNG-KTMTIVGGIAHNAKDGYGGKPDKVLQHNSKNSTTVVKGNFTLTGEHGKLWRSCGDCSNNGGPRFLTVTS 270 (344)
T ss_dssp CSSCSEEECS-SEEEEESCEEEECTTCTTSSCCEEEEECCSSEEEEEETTEEEEEEEEEEEEECSSCTTCCCCEEEEESS
T ss_pred cccccceecC-ceEEEECchhccccccccCCCCcEEEeCCCccEEEecCceEEEccCCeEeEccCCcccCCcceEEEEec
Confidence 3567787774 4678877777665 45554444455666665 22 2123343333333222222446777777
Q ss_pred EEEeC
Q 013309 298 ALISN 302 (445)
Q Consensus 298 ~~~~~ 302 (445)
+.+.+
T Consensus 271 v~~~g 275 (344)
T 3b4n_A 271 ATVNG 275 (344)
T ss_dssp EEEEE
T ss_pred eEEeC
Confidence 77633
No 83
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=87.30 E-value=0.2 Score=49.02 Aligned_cols=40 Identities=33% Similarity=0.507 Sum_probs=30.0
Q ss_pred ccccCCCCCccHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee
Q 013309 60 FGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI 103 (445)
Q Consensus 60 fGa~gdg~tDdT~Aiq~Ai~~a~~~~gg~~v~~P~G~~Yl~~~l 103 (445)
=||+|||++|||+|+..|++.+ + ++.++=..|.||.+..|
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~---~-~~~~IDG~G~T~kVs~l 43 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT---P-VGQKINGNGKTYKVTSL 43 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS---C-TTSCEECTTCEEECSSC
T ss_pred CcccCCCccCcHHHHHHHhccC---C-CCeEEeCCCceEEeeeC
Confidence 4899999999999999999843 2 34555566777766543
No 84
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=82.10 E-value=40 Score=33.22 Aligned_cols=137 Identities=13% Similarity=0.155 Sum_probs=69.3
Q ss_pred EEEeecceEEeceEEEcCCCc----------eeEEEceecEEEEeEEEECCCCCCCCCceee-----------eceecEE
Q 013309 183 TFHKCKNLKVQNLRVVNSQQM----------HIAFTNCLRVVISNLEVIAPAESPNTDGIHI-----------SASRGVE 241 (445)
Q Consensus 183 ~~~~~~nv~I~~v~i~ns~~~----------~i~~~~~~nv~I~n~~I~~~~~~~n~DGi~~-----------~~s~nv~ 241 (445)
.....+++..+|++|+|.... .+. ..++...+.+|.+.+..| -+.. .....-.
T Consensus 196 ~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~-v~gDr~~fy~C~f~G~QD-----TLy~~~~~~~~~~~~d~~gRqy 269 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALR-TDGDQVQINNVNILGRQN-----TFFVTNSGVQNRLETNRQPRTL 269 (422)
T ss_dssp EEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEE-ECCSSEEEEEEEEECSTT-----CEEECCCCTTCSCCSSCCCEEE
T ss_pred EEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEE-ecCCcEEEEeeEEEeecc-----eeeeccccccccccccccccEE
Confidence 345678999999999986431 122 245667777777776433 1222 1123456
Q ss_pred EEeeEEecCCccEEEeCCceeEEEEeeEEcC--C----ce-EEEeecCCcCCCccEEeEEEEcEEEeCCcce-EEEE-Ee
Q 013309 242 VKNSIVGTGDDCISIVGNSSLIRIRNFACGP--G----HG-ISIGSLGKSNSSVRIHDIMVYGALISNTQNG-VRIK-TW 312 (445)
Q Consensus 242 I~n~~i~~gdD~i~i~~~~~ni~I~n~~~~~--~----~g-i~igs~g~~~~~~~v~nv~i~n~~~~~~~~g-i~i~-~~ 312 (445)
.++|.|...=|-|. + .....++||++.. . .| |.-.+ .....-....|.||+|.....+ ..+. .|
T Consensus 270 y~~CyIeGtVDFIF-G--~a~AvFe~C~I~s~~~~~~~~g~ITA~~----t~~~~~~Gfvf~nC~ita~~~~~~yLGRPW 342 (422)
T 3grh_A 270 VTNSYIEGDVDIVS-G--RGAVVFDNTEFRVVNSRTQQEAYVFAPA----TLSNIYYGFLAVNSRFNAFGDGVAQLGRSL 342 (422)
T ss_dssp EESCEEEESEEEEE-E--SSEEEEESCEEEECCSSCSSCCEEEEEC----CBTTCCCCEEEESCEEEECSSSCBEEEEEE
T ss_pred EEecEEeccccEEc-c--CceEEEEeeEEEEecCCCCCceEEEecC----CCCCCCCEEEEECCEEEeCCCCCEEcCCCC
Confidence 66777765444332 1 3356677776641 0 12 33322 1222334567777777632211 2221 22
Q ss_pred cCCCceeeeEEEEeEEEecC
Q 013309 313 QGGSGSATNIQFLDVLMKNV 332 (445)
Q Consensus 313 ~g~~g~v~ni~~~ni~~~~~ 332 (445)
....-..-.|+|.|..|.+.
T Consensus 343 ~~ysrt~~qVVf~~s~l~~~ 362 (422)
T 3grh_A 343 DVDANTNGQVVIRDSAINEG 362 (422)
T ss_dssp CCSTTBCCEEEEESCEECTT
T ss_pred CCcCCcCccEEEEeCcccCc
Confidence 21111223466777777654
No 85
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=70.01 E-value=37 Score=33.07 Aligned_cols=79 Identities=16% Similarity=0.115 Sum_probs=48.6
Q ss_pred ecEEEEeeE-EecCCccEEEeCC---------------------ceeEEEEeeEEcCCceEEEeecCCcCCCccEEeEEE
Q 013309 238 RGVEVKNSI-VGTGDDCISIVGN---------------------SSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMV 295 (445)
Q Consensus 238 ~nv~I~n~~-i~~gdD~i~i~~~---------------------~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~nv~i 295 (445)
=|...+|+. |..-.|++.+.+. -.|=.|+|+...++.|+.+|.- ...++++||++
T Consensus 263 YnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~lGVG~~~D---G~~~~v~ni~~ 339 (543)
T 3riq_A 263 YRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCMGIGAWWD---GQKNIIDNVVT 339 (543)
T ss_dssp BSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCSSCSSEEC---SSSCEEEEEEE
T ss_pred eeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccceeeeeec---CCCCeEeeEEe
Confidence 355666655 3446777777651 2466788888877777766542 35678888887
Q ss_pred EcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEec
Q 013309 296 YGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKN 331 (445)
Q Consensus 296 ~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~ 331 (445)
++|. ..|+.+++. +-+|.||++-+
T Consensus 340 ~dca----g~G~~~~~~--------~~~ftNitvI~ 363 (543)
T 3riq_A 340 YEAH----KEGMFDRGT--------NNDITNITVVC 363 (543)
T ss_dssp ESCS----SCSEEECSS--------SCEEEEEEEES
T ss_pred eccc----cCcceeecc--------CcceeeEEEEe
Confidence 7664 345555532 33566666643
No 86
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=58.66 E-value=34 Score=32.67 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=38.8
Q ss_pred ceeEEEEeeEEc-CC-ceEEEeecCC---c------------CCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeE
Q 013309 260 SSLIRIRNFACG-PG-HGISIGSLGK---S------------NSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNI 322 (445)
Q Consensus 260 ~~ni~I~n~~~~-~~-~gi~igs~g~---~------------~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni 322 (445)
..|..+++...- .- +|+-+|+--. . ....--.|=.|.|..+.++ -|+.+.. +|.+++|+||
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GM-DG~G~YVSNi 346 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGM-DGKGMYVSNI 346 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEE-EEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 568888887653 32 3677766300 0 0011113456888888876 4555543 4556788888
Q ss_pred EEEeEE
Q 013309 323 QFLDVL 328 (445)
Q Consensus 323 ~~~ni~ 328 (445)
+++++.
T Consensus 347 tv~DCA 352 (559)
T 2vfm_A 347 TVEDCA 352 (559)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 777753
No 87
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=56.28 E-value=32 Score=32.87 Aligned_cols=67 Identities=21% Similarity=0.265 Sum_probs=38.4
Q ss_pred ceeEEEEeeEEc-CC-ceEEEeecCC---------------cCCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeE
Q 013309 260 SSLIRIRNFACG-PG-HGISIGSLGK---------------SNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNI 322 (445)
Q Consensus 260 ~~ni~I~n~~~~-~~-~gi~igs~g~---------------~~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni 322 (445)
..|..+++...- .- +|+-+|+--. +....--.|=.|.|..+.++ -|+.+.. +|.+++|+||
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GM-DG~G~YVSNi 349 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGM-DGSGGYVSNV 349 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEE-EEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 468888887653 22 3566665200 00011113556888888876 4555543 4556788888
Q ss_pred EEEeEE
Q 013309 323 QFLDVL 328 (445)
Q Consensus 323 ~~~ni~ 328 (445)
+++++.
T Consensus 350 tv~DCA 355 (559)
T 2v5i_A 350 TVQDCA 355 (559)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 777753
No 88
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=51.78 E-value=1.6e+02 Score=27.63 Aligned_cols=41 Identities=27% Similarity=0.477 Sum_probs=18.9
Q ss_pred cEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecCCc
Q 013309 289 RIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSN 334 (445)
Q Consensus 289 ~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~~~ 334 (445)
-..+++|+.+.-.++..|-.+.- .|+ ++|+++||++.+++.
T Consensus 140 ~ls~~ti~~nk~~ds~qg~qvs~-~gg----~dvsv~~i~fsn~~g 180 (542)
T 2x3h_A 140 RLSNITVESNKATDTTQGQQVSL-AGG----SDVTVSDVNFSNVKG 180 (542)
T ss_dssp EEEEEEEECCCSSTTCBCCSEEE-ESC----EEEEEEEEEEEEECS
T ss_pred ceeeEEEecccCCccccceEEEe-cCC----CcceEeeeeeeecCC
Confidence 34455555555444444433321 122 455555555555543
No 89
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=46.61 E-value=55 Score=32.58 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=38.4
Q ss_pred ceeEEEEeeEEc-CC-ceEEEeecCC---c------------CCCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeE
Q 013309 260 SSLIRIRNFACG-PG-HGISIGSLGK---S------------NSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNI 322 (445)
Q Consensus 260 ~~ni~I~n~~~~-~~-~gi~igs~g~---~------------~~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni 322 (445)
..|..+++...- .- +|+-+|+--. . ....--.|=.|.|..+.++ -|+.+.. +|.+++|+||
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gm-dg~g~yvsni 453 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGM-DGKGMYVSNI 453 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEE-EEESCEEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 467888887653 22 3677766300 0 0011113456788888776 4555543 4556788887
Q ss_pred EEEeEE
Q 013309 323 QFLDVL 328 (445)
Q Consensus 323 ~~~ni~ 328 (445)
+++++.
T Consensus 454 tv~dca 459 (666)
T 2xc1_A 454 TVEDCA 459 (666)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 777653
No 90
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=43.48 E-value=29 Score=33.79 Aligned_cols=68 Identities=12% Similarity=0.121 Sum_probs=40.4
Q ss_pred ceeEEEEeeEEcCC--ceEEEeecCCcC-------------CCccEEeEEEEcEEEeCCcceEEEEEecCCCceeeeEEE
Q 013309 260 SSLIRIRNFACGPG--HGISIGSLGKSN-------------SSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQF 324 (445)
Q Consensus 260 ~~ni~I~n~~~~~~--~gi~igs~g~~~-------------~~~~v~nv~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~ 324 (445)
+.|..++|...-.. +|+-+++--... -..--.|=.|+|+...++ .|+.+. ++|.+++++||+.
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~-lGVG~~-~DG~~~~v~ni~~ 339 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDC-MGIGAW-WDGQKNIIDNVVT 339 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESC-SSCSSE-ECSSSCEEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheecc-ceeeee-ecCCCCeEeeEEe
Confidence 56888999875332 467776511000 011113445788887776 455543 4778889999987
Q ss_pred EeEEE
Q 013309 325 LDVLM 329 (445)
Q Consensus 325 ~ni~~ 329 (445)
+++.-
T Consensus 340 ~dcag 344 (543)
T 3riq_A 340 YEAHK 344 (543)
T ss_dssp ESCSS
T ss_pred ecccc
Confidence 76543
No 91
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=43.36 E-value=1.4e+02 Score=28.53 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=51.0
Q ss_pred ecEEEEeeEEec-CCccEEEeCC-----------------------ceeEEEEeeEEcCCceEEEeecCCcCCCccEEeE
Q 013309 238 RGVEVKNSIVGT-GDDCISIVGN-----------------------SSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDI 293 (445)
Q Consensus 238 ~nv~I~n~~i~~-gdD~i~i~~~-----------------------~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~nv 293 (445)
-|...+++.... -.|++.+++. -.|=.|.|..+.++-|+.+|--| .+++|+||
T Consensus 270 YNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG---~G~YVSNi 346 (559)
T 2vfm_A 270 YNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSNI 346 (559)
T ss_dssp BSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEE---ESCEEEEE
T ss_pred cceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEeee
Confidence 456666666543 5777777652 35678888888776666655422 46678888
Q ss_pred EEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecC
Q 013309 294 MVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNV 332 (445)
Q Consensus 294 ~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~ 332 (445)
++++|- ..|..+.++ +-+|.||++-+.
T Consensus 347 tv~DCA----GsG~~~~t~--------~~~FtNi~vID~ 373 (559)
T 2vfm_A 347 TVEDCA----GSGAYLLTH--------ESVFTNIAIIDT 373 (559)
T ss_dssp EEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred Eehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 887774 345555443 446777777654
No 92
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=41.26 E-value=1.4e+02 Score=28.56 Aligned_cols=80 Identities=15% Similarity=0.211 Sum_probs=51.0
Q ss_pred ecEEEEeeEEec-CCccEEEeCC-----------------------ceeEEEEeeEEcCCceEEEeecCCcCCCccEEeE
Q 013309 238 RGVEVKNSIVGT-GDDCISIVGN-----------------------SSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDI 293 (445)
Q Consensus 238 ~nv~I~n~~i~~-gdD~i~i~~~-----------------------~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~nv 293 (445)
-|...+++.... -.|++.+++. -.|=.|.|..+.++-|+.+|--| .+++|+||
T Consensus 273 YNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG---~G~YVSNi 349 (559)
T 2v5i_A 273 YNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDG---SGGYVSNV 349 (559)
T ss_dssp BSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEEE
T ss_pred cceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEeee
Confidence 456666666543 4677777652 35678888888776666655422 46678888
Q ss_pred EEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecC
Q 013309 294 MVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNV 332 (445)
Q Consensus 294 ~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~ 332 (445)
++++|- ..|..+.++ +-+|.||++-+.
T Consensus 350 tv~DCA----GsG~~~~t~--------~~~FtNi~vID~ 376 (559)
T 2v5i_A 350 TVQDCA----GAGMLAHTY--------NRVFSNITVIDC 376 (559)
T ss_dssp EEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred Eehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 887774 345555443 446778877654
No 93
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=34.71 E-value=2e+02 Score=28.61 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=51.3
Q ss_pred ecEEEEeeEEec-CCccEEEeCC-----------------------ceeEEEEeeEEcCCceEEEeecCCcCCCccEEeE
Q 013309 238 RGVEVKNSIVGT-GDDCISIVGN-----------------------SSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDI 293 (445)
Q Consensus 238 ~nv~I~n~~i~~-gdD~i~i~~~-----------------------~~ni~I~n~~~~~~~gi~igs~g~~~~~~~v~nv 293 (445)
-|...+++.... -.|++.+++. -.|=.|.|..+.++-|+.+|--| .+++++||
T Consensus 377 ynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg---~g~yvsni 453 (666)
T 2xc1_A 377 YNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSNI 453 (666)
T ss_dssp BSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEEE
T ss_pred cceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEeee
Confidence 456677766544 5778877752 35678888888776666655422 46678888
Q ss_pred EEEcEEEeCCcceEEEEEecCCCceeeeEEEEeEEEecC
Q 013309 294 MVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNV 332 (445)
Q Consensus 294 ~i~n~~~~~~~~gi~i~~~~g~~g~v~ni~~~ni~~~~~ 332 (445)
++++|- ..|..+.++ +-+|.||++-++
T Consensus 454 tv~dca----g~g~~~~~~--------~~~ftni~vid~ 480 (666)
T 2xc1_A 454 TVEDCA----GSGAYLLTH--------ESVFTNIAIIDT 480 (666)
T ss_dssp EEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred Eehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 887774 345555443 446777777654
No 94
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.48 E-value=27 Score=30.06 Aligned_cols=11 Identities=9% Similarity=0.492 Sum_probs=5.9
Q ss_pred EEEEeecceEE
Q 013309 182 ITFHKCKNLKV 192 (445)
Q Consensus 182 i~~~~~~nv~I 192 (445)
+.+.+|++++|
T Consensus 71 v~i~~C~~~~i 81 (179)
T 2yuh_A 71 VFLEDCSDCVL 81 (179)
T ss_dssp EEEESCBSCEE
T ss_pred EEEEeCCceEE
Confidence 55555555554
No 95
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=31.97 E-value=2.2e+02 Score=27.24 Aligned_cols=11 Identities=18% Similarity=0.646 Sum_probs=6.2
Q ss_pred EEEEeecceEE
Q 013309 182 ITFHKCKNLKV 192 (445)
Q Consensus 182 i~~~~~~nv~I 192 (445)
+.+.+|+|.+|
T Consensus 64 v~I~nc~~c~I 74 (352)
T 3bh7_B 64 FLIQDCENCNI 74 (352)
T ss_dssp EEEESCBSCEE
T ss_pred EEEecCcCCEE
Confidence 55555555555
No 96
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=26.33 E-value=98 Score=29.68 Aligned_cols=7 Identities=14% Similarity=0.093 Sum_probs=3.2
Q ss_pred cEEEEee
Q 013309 239 GVEVKNS 245 (445)
Q Consensus 239 nv~I~n~ 245 (445)
...|++|
T Consensus 136 ~PIIEdc 142 (352)
T 3bh7_B 136 QPIIESS 142 (352)
T ss_dssp CCEEESC
T ss_pred CcEEEcC
Confidence 4444444
Done!