Query 013310
Match_columns 445
No_of_seqs 317 out of 2445
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 08:11:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013310.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013310hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 99.9 4.6E-28 1.6E-32 218.5 11.6 167 184-437 4-171 (172)
2 3oi8_A Uncharacterized protein 99.9 5.4E-26 1.9E-30 201.6 14.0 138 186-329 2-140 (156)
3 3ocm_A Putative membrane prote 99.9 6E-26 2.1E-30 205.3 12.5 156 203-442 13-169 (173)
4 3lv9_A Putative transporter; C 99.9 8.3E-25 2.9E-29 191.7 10.7 123 205-329 2-125 (148)
5 3oco_A Hemolysin-like protein 99.9 6.5E-25 2.2E-29 193.7 5.5 149 208-439 2-152 (153)
6 3lfr_A Putative metal ION tran 99.9 1E-22 3.5E-27 176.1 10.3 132 225-439 2-136 (136)
7 3jtf_A Magnesium and cobalt ef 99.9 6.7E-22 2.3E-26 169.2 13.0 105 223-329 2-106 (129)
8 3k6e_A CBS domain protein; str 99.9 5.7E-22 1.9E-26 176.1 9.6 103 223-329 12-122 (156)
9 3hf7_A Uncharacterized CBS-dom 99.9 6.6E-22 2.2E-26 169.7 9.1 103 225-329 1-107 (130)
10 3i8n_A Uncharacterized protein 99.8 2.3E-21 7.8E-26 166.0 7.5 106 222-329 2-109 (130)
11 3nqr_A Magnesium and cobalt ef 99.8 1.3E-20 4.4E-25 160.7 11.4 103 225-329 2-106 (127)
12 3kxr_A Magnesium transporter, 99.8 6E-20 2E-24 170.4 16.5 127 187-329 25-154 (205)
13 2qrd_G Protein C1556.08C; AMPK 99.8 4E-21 1.4E-25 190.3 3.4 210 208-429 3-243 (334)
14 4esy_A CBS domain containing m 99.8 9.4E-20 3.2E-24 163.4 11.6 111 213-329 7-143 (170)
15 2v8q_E 5'-AMP-activated protei 99.8 3.6E-21 1.2E-25 190.5 -0.1 212 204-429 15-251 (330)
16 3t4n_C Nuclear protein SNF4; C 99.8 3.5E-21 1.2E-25 189.9 -1.7 213 205-429 8-248 (323)
17 2yvy_A MGTE, Mg2+ transporter 99.8 7E-19 2.4E-23 170.6 13.7 138 186-329 90-237 (278)
18 2zy9_A Mg2+ transporter MGTE; 99.8 3E-18 1E-22 178.3 15.8 134 186-329 110-257 (473)
19 3ddj_A CBS domain-containing p 99.8 7.3E-20 2.5E-24 178.2 3.1 217 185-429 63-285 (296)
20 2emq_A Hypothetical conserved 99.7 6.7E-18 2.3E-22 148.6 12.3 108 218-329 3-119 (157)
21 3ctu_A CBS domain protein; str 99.7 3E-18 1E-22 151.0 9.2 107 219-329 8-122 (156)
22 3kh5_A Protein MJ1225; AMPK, A 99.7 7.2E-20 2.5E-24 176.0 -1.5 218 185-427 50-279 (280)
23 3kh5_A Protein MJ1225; AMPK, A 99.7 1.8E-18 6E-23 166.3 7.0 182 227-428 4-204 (280)
24 4gqw_A CBS domain-containing p 99.7 1.6E-17 5.4E-22 144.8 11.8 104 224-329 3-123 (152)
25 3lqn_A CBS domain protein; csg 99.7 6.6E-18 2.2E-22 147.6 9.2 104 222-329 11-123 (150)
26 2oux_A Magnesium transporter; 99.7 3.7E-17 1.3E-21 159.2 14.7 117 207-329 118-239 (286)
27 3kpb_A Uncharacterized protein 99.7 1.1E-17 3.6E-22 140.8 8.8 100 226-329 1-100 (122)
28 2yzi_A Hypothetical protein PH 99.7 4.7E-17 1.6E-21 140.0 13.0 104 221-329 2-109 (138)
29 3fhm_A Uncharacterized protein 99.7 1.3E-17 4.4E-22 148.6 8.9 110 218-329 16-131 (165)
30 3gby_A Uncharacterized protein 99.7 4.3E-17 1.5E-21 138.7 11.3 101 224-329 3-106 (128)
31 3ddj_A CBS domain-containing p 99.7 6.2E-18 2.1E-22 164.5 6.6 185 221-428 15-213 (296)
32 2yzq_A Putative uncharacterize 99.7 4.5E-18 1.5E-22 163.9 5.1 178 226-424 1-179 (282)
33 3sl7_A CBS domain-containing p 99.7 3.9E-17 1.3E-21 146.7 10.5 103 225-329 3-136 (180)
34 2ef7_A Hypothetical protein ST 99.7 7.6E-17 2.6E-21 137.8 10.9 102 223-329 1-105 (133)
35 3k2v_A Putative D-arabinose 5- 99.7 1.7E-17 5.9E-22 145.1 7.0 102 226-329 28-133 (149)
36 2p9m_A Hypothetical protein MJ 99.7 1.5E-16 5.3E-21 136.6 11.5 103 223-329 5-116 (138)
37 1yav_A Hypothetical protein BS 99.7 6.1E-17 2.1E-21 143.1 9.1 104 222-329 10-122 (159)
38 2rc3_A CBS domain; in SITU pro 99.7 1E-16 3.6E-21 137.4 10.2 100 227-329 7-112 (135)
39 2rih_A Conserved protein with 99.7 9.4E-17 3.2E-21 138.9 9.9 99 226-329 5-108 (141)
40 3t4n_C Nuclear protein SNF4; C 99.7 1.3E-17 4.5E-22 164.2 5.0 186 228-429 116-320 (323)
41 4fry_A Putative signal-transdu 99.7 1.4E-16 4.8E-21 140.3 10.8 101 226-329 7-116 (157)
42 2yzq_A Putative uncharacterize 99.7 4.7E-17 1.6E-21 156.8 8.0 190 225-429 59-279 (282)
43 3fv6_A YQZB protein; CBS domai 99.7 2.7E-16 9.1E-21 139.1 10.7 102 223-329 14-121 (159)
44 1o50_A CBS domain-containing p 99.7 3.9E-16 1.3E-20 137.6 11.0 102 222-329 12-133 (157)
45 1y5h_A Hypothetical protein RV 99.6 2.2E-16 7.5E-21 134.9 7.7 102 224-329 6-112 (133)
46 1pbj_A Hypothetical protein; s 99.6 3.2E-16 1.1E-20 132.1 8.5 99 226-329 1-103 (125)
47 1pvm_A Conserved hypothetical 99.6 4.5E-16 1.6E-20 141.1 10.1 101 226-330 9-114 (184)
48 2o16_A Acetoin utilization pro 99.6 3.9E-16 1.3E-20 138.3 8.9 102 224-329 3-116 (160)
49 2nyc_A Nuclear protein SNF4; b 99.6 5.1E-16 1.8E-20 134.0 8.8 103 223-329 5-121 (144)
50 2qrd_G Protein C1556.08C; AMPK 99.6 7.9E-17 2.7E-21 159.4 4.1 188 229-429 110-315 (334)
51 2j9l_A Chloride channel protei 99.6 6.3E-16 2.2E-20 139.5 9.6 106 223-329 8-146 (185)
52 2pfi_A Chloride channel protei 99.6 6.2E-16 2.1E-20 136.6 8.8 109 218-329 5-128 (164)
53 2v8q_E 5'-AMP-activated protei 99.6 2.9E-16 1E-20 155.1 6.6 188 227-429 119-323 (330)
54 2uv4_A 5'-AMP-activated protei 99.6 1.3E-15 4.5E-20 133.5 9.5 101 223-329 20-131 (152)
55 3org_A CMCLC; transporter, tra 99.6 4.5E-16 1.5E-20 167.4 5.5 124 224-352 451-626 (632)
56 1vr9_A CBS domain protein/ACT 99.6 1.2E-14 4E-19 135.3 13.7 117 226-350 13-129 (213)
57 1zfj_A Inosine monophosphate d 99.6 1.4E-14 5E-19 151.3 13.7 150 186-350 54-210 (491)
58 4fxs_A Inosine-5'-monophosphat 99.5 1.7E-15 5.9E-20 158.0 4.9 150 185-350 52-208 (496)
59 3usb_A Inosine-5'-monophosphat 99.5 2.1E-14 7.3E-19 150.3 12.6 149 186-350 77-233 (511)
60 3l2b_A Probable manganase-depe 99.5 1E-14 3.5E-19 138.2 8.7 102 225-330 6-225 (245)
61 2d4z_A Chloride channel protei 99.5 3.7E-14 1.2E-18 135.2 9.6 60 222-284 9-69 (250)
62 3pc3_A CG1753, isoform A; CBS, 99.5 3.9E-14 1.3E-18 149.3 10.5 102 223-329 381-487 (527)
63 1me8_A Inosine-5'-monophosphat 99.5 8.9E-15 3E-19 153.2 2.5 158 186-354 61-224 (503)
64 2cu0_A Inosine-5'-monophosphat 99.4 1.8E-14 6.2E-19 150.3 1.9 146 186-350 57-207 (486)
65 4avf_A Inosine-5'-monophosphat 99.4 1.7E-14 5.9E-19 150.3 1.3 149 185-350 51-206 (490)
66 1vrd_A Inosine-5'-monophosphat 99.3 6.9E-13 2.4E-17 138.7 1.8 133 209-353 82-217 (494)
67 1jcn_A Inosine monophosphate d 99.2 3.2E-12 1.1E-16 134.2 1.0 121 226-351 108-233 (514)
68 4af0_A Inosine-5'-monophosphat 99.2 3.7E-12 1.2E-16 130.8 1.3 127 212-350 129-257 (556)
69 3ghd_A A cystathionine beta-sy 98.8 1.1E-08 3.6E-13 77.7 6.5 65 237-304 1-70 (70)
70 3org_A CMCLC; transporter, tra 98.6 2.6E-09 8.8E-14 114.8 -0.7 128 289-429 451-625 (632)
71 3fio_A A cystathionine beta-sy 98.5 1.3E-07 4.5E-12 70.7 6.4 64 238-304 2-70 (70)
72 1vr9_A CBS domain protein/ACT 98.5 1.2E-08 4.2E-13 94.3 -0.1 103 225-332 71-174 (213)
73 4fxs_A Inosine-5'-monophosphat 98.5 6.4E-08 2.2E-12 100.8 4.0 118 292-427 90-207 (496)
74 1me8_A Inosine-5'-monophosphat 98.4 4.1E-08 1.4E-12 102.6 0.0 116 297-429 103-221 (503)
75 4esy_A CBS domain containing m 98.4 3.9E-07 1.3E-11 80.7 5.9 41 290-330 17-57 (170)
76 1vrd_A Inosine-5'-monophosphat 98.3 9.3E-08 3.2E-12 99.7 0.5 120 292-429 96-215 (494)
77 3ghd_A A cystathionine beta-sy 98.2 1.5E-06 5.3E-11 65.6 5.7 29 301-329 2-30 (70)
78 4avf_A Inosine-5'-monophosphat 98.2 1.5E-07 5E-12 98.0 -0.1 118 292-428 89-206 (490)
79 3lhh_A CBS domain protein; str 98.1 5.2E-06 1.8E-10 73.6 6.7 56 291-348 42-100 (172)
80 3l2b_A Probable manganase-depe 98.0 7.3E-06 2.5E-10 76.9 7.7 40 290-329 6-45 (245)
81 1jcn_A Inosine monophosphate d 98.0 4.5E-07 1.5E-11 95.0 -1.0 121 292-428 109-232 (514)
82 4fry_A Putative signal-transdu 98.0 4.2E-06 1.4E-10 72.7 5.0 60 223-287 75-134 (157)
83 3kpb_A Uncharacterized protein 98.0 4.8E-06 1.6E-10 68.8 5.0 56 292-349 2-57 (122)
84 3lv9_A Putative transporter; C 98.0 9.8E-06 3.3E-10 69.6 7.0 57 290-348 22-81 (148)
85 3fv6_A YQZB protein; CBS domai 98.0 6.9E-06 2.4E-10 71.6 5.7 63 222-286 77-142 (159)
86 3fio_A A cystathionine beta-sy 98.0 1E-05 3.4E-10 60.2 5.8 30 300-329 1-30 (70)
87 2cu0_A Inosine-5'-monophosphat 98.0 1.1E-06 3.6E-11 91.5 0.2 113 293-428 95-207 (486)
88 3k2v_A Putative D-arabinose 5- 98.0 1.2E-05 4.3E-10 69.1 7.0 48 291-338 28-77 (149)
89 3gby_A Uncharacterized protein 98.0 7.3E-06 2.5E-10 68.6 5.2 58 290-350 4-61 (128)
90 2yzi_A Hypothetical protein PH 98.0 1.4E-05 4.7E-10 67.6 6.9 55 290-346 6-60 (138)
91 3lfr_A Putative metal ION tran 97.9 1.1E-05 3.8E-10 68.4 6.0 59 224-287 68-126 (136)
92 3ctu_A CBS domain protein; str 97.9 1.3E-05 4.4E-10 69.4 6.3 40 291-330 15-56 (156)
93 2o16_A Acetoin utilization pro 97.9 1.4E-05 4.8E-10 69.8 6.5 39 291-329 5-43 (160)
94 3jtf_A Magnesium and cobalt ef 97.9 9.5E-06 3.2E-10 68.1 4.9 59 290-350 4-65 (129)
95 1pbj_A Hypothetical protein; s 97.9 1.3E-05 4.3E-10 66.4 5.5 59 223-286 62-120 (125)
96 3nqr_A Magnesium and cobalt ef 97.9 1.2E-05 3.9E-10 67.3 5.0 58 224-286 67-124 (127)
97 1pvm_A Conserved hypothetical 97.9 2.7E-05 9.1E-10 69.6 7.6 61 223-287 72-132 (184)
98 2ef7_A Hypothetical protein ST 97.9 1.3E-05 4.5E-10 67.3 5.2 58 225-286 66-123 (133)
99 4gqw_A CBS domain-containing p 97.9 9.5E-06 3.2E-10 69.5 4.2 60 223-286 82-141 (152)
100 2p9m_A Hypothetical protein MJ 97.9 2.2E-05 7.5E-10 66.2 6.5 54 290-345 7-60 (138)
101 2rc3_A CBS domain; in SITU pro 97.9 1.9E-05 6.4E-10 66.6 6.0 59 223-286 71-129 (135)
102 3lqn_A CBS domain protein; csg 97.8 1.4E-05 4.8E-10 68.6 5.1 48 291-338 15-64 (150)
103 3i8n_A Uncharacterized protein 97.8 1.5E-05 5E-10 67.0 5.1 58 290-349 5-65 (130)
104 2rih_A Conserved protein with 97.8 2.1E-05 7.2E-10 66.8 6.1 54 291-346 5-60 (141)
105 3k6e_A CBS domain protein; str 97.8 2.5E-05 8.4E-10 68.3 6.6 40 291-330 15-56 (156)
106 2d4z_A Chloride channel protei 97.8 2.7E-05 9.2E-10 73.7 7.3 40 290-329 12-51 (250)
107 3oco_A Hemolysin-like protein 97.8 2.3E-05 7.8E-10 67.8 6.0 57 225-286 85-141 (153)
108 2emq_A Hypothetical conserved 97.8 2.8E-05 9.5E-10 67.2 6.5 57 290-348 10-68 (157)
109 1y5h_A Hypothetical protein RV 97.8 1.6E-05 5.4E-10 66.7 4.7 60 223-287 71-130 (133)
110 2pfi_A Chloride channel protei 97.8 2.8E-05 9.5E-10 67.5 6.4 40 290-329 12-51 (164)
111 3sl7_A CBS domain-containing p 97.8 1.2E-05 4.2E-10 71.0 3.8 61 222-286 94-154 (180)
112 3fhm_A Uncharacterized protein 97.8 3.1E-05 1.1E-09 67.8 6.3 60 223-287 90-149 (165)
113 3hf7_A Uncharacterized CBS-dom 97.8 1.5E-05 5E-10 67.2 3.9 57 225-286 69-125 (130)
114 1o50_A CBS domain-containing p 97.8 1.5E-05 5.1E-10 69.2 4.1 60 222-286 92-151 (157)
115 2uv4_A 5'-AMP-activated protei 97.8 1.9E-05 6.6E-10 68.1 4.6 60 225-286 86-149 (152)
116 1yav_A Hypothetical protein BS 97.7 2.6E-05 8.8E-10 67.8 5.1 48 291-338 14-63 (159)
117 2nyc_A Nuclear protein SNF4; b 97.7 5.3E-05 1.8E-09 64.1 7.0 39 291-329 8-49 (144)
118 3usb_A Inosine-5'-monophosphat 97.7 4.4E-05 1.5E-09 79.6 7.6 112 223-338 172-285 (511)
119 3oi8_A Uncharacterized protein 97.7 2.9E-05 9.8E-10 67.5 5.1 55 224-283 101-155 (156)
120 3ocm_A Putative membrane prote 97.7 5.6E-05 1.9E-09 67.2 7.1 59 289-349 34-95 (173)
121 3kxr_A Magnesium transporter, 97.7 3.2E-05 1.1E-09 70.9 5.5 61 223-287 113-173 (205)
122 4af0_A Inosine-5'-monophosphat 97.6 7.3E-06 2.5E-10 84.4 0.1 111 295-426 142-255 (556)
123 2j9l_A Chloride channel protei 97.6 6.8E-05 2.3E-09 66.5 5.8 39 290-328 10-54 (185)
124 2yvy_A MGTE, Mg2+ transporter 97.4 9.4E-05 3.2E-09 70.8 5.0 61 223-287 196-256 (278)
125 2oux_A Magnesium transporter; 97.3 0.00014 4.7E-09 70.1 4.3 60 223-286 198-257 (286)
126 3pc3_A CG1753, isoform A; CBS, 97.3 0.00032 1.1E-08 73.5 6.9 57 290-348 383-441 (527)
127 2zy9_A Mg2+ transporter MGTE; 97.1 0.00032 1.1E-08 72.4 5.2 60 223-286 216-275 (473)
128 1zfj_A Inosine monophosphate d 96.4 0.0083 2.8E-07 62.0 9.0 100 224-327 150-251 (491)
129 2pli_A Uncharacterized protein 94.7 0.0053 1.8E-07 48.4 -0.1 49 365-413 12-63 (91)
130 3llb_A Uncharacterized protein 94.5 0.0076 2.6E-07 46.6 0.3 47 366-412 4-52 (83)
131 3lae_A UPF0053 protein HI0107; 94.5 0.0086 2.9E-07 46.1 0.6 46 366-411 4-51 (81)
132 2rk5_A Putative hemolysin; str 94.1 0.0079 2.7E-07 47.0 -0.3 47 367-413 4-53 (87)
133 2r2z_A Hemolysin; APC85144, en 93.9 0.0095 3.2E-07 47.1 -0.2 49 365-413 10-61 (93)
134 2p13_A CBS domain; alpha-beta 93.7 0.013 4.4E-07 46.1 0.3 49 365-413 9-62 (90)
135 2pls_A CBS domain protein; APC 93.5 0.015 5.1E-07 45.2 0.3 47 367-413 5-58 (86)
136 2o3g_A Putative protein; APC85 93.3 0.017 5.7E-07 45.6 0.3 49 365-413 11-64 (92)
137 2p4p_A Hypothetical protein HD 93.2 0.021 7.1E-07 44.4 0.7 47 367-413 5-56 (86)
138 2oai_A Hemolysin; PFAM03471, x 93.1 0.015 5.3E-07 46.0 -0.2 49 365-413 12-66 (94)
139 2p3h_A Uncharacterized CBS dom 93.1 0.015 5.1E-07 46.8 -0.3 49 366-414 7-58 (101)
140 3ded_A Probable hemolysin; str 92.8 0.025 8.4E-07 46.5 0.6 49 364-412 28-83 (113)
141 2nqw_A CBS domain protein; PFA 89.9 0.058 2E-06 42.5 -0.0 49 365-413 9-65 (93)
142 3arc_L Photosystem II reaction 53.9 15 0.00051 23.1 3.3 22 30-52 14-35 (37)
143 1rij_A E6APN1 peptide; Trp-CAG 45.2 5.2 0.00018 22.5 0.3 11 19-29 11-21 (26)
144 4h33_A LMO2059 protein; bilaye 27.4 1.8E+02 0.0061 23.7 7.2 19 125-143 51-69 (137)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.95 E-value=4.6e-28 Score=218.52 Aligned_cols=167 Identities=25% Similarity=0.466 Sum_probs=114.8
Q ss_pred cccccHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEE
Q 013310 184 EALFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRV 263 (445)
Q Consensus 184 ~~~~s~eEl~~li~~~~~e~~~~g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~ 263 (445)
...+|++||+.+++ ++.+.|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.|.+++++++
T Consensus 4 ~~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~ 78 (172)
T 3lhh_A 4 DDNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRF 78 (172)
T ss_dssp -------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEE
T ss_pred cccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEE
Confidence 45689999999998 45567999999999999999999999999999988999999999998 99999999999999
Q ss_pred EeEeCCCCCEEEEEEhhhhhccCCCC-CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCC
Q 013310 264 PVYSGNPKNIIGLLLVKSLLTVRPET-ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTD 342 (445)
Q Consensus 264 PV~~~~~~~ivGiv~~kDll~~~~~~-~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~ 342 (445)
||++++.++++|+|+.+|+++....+ ..+++++| ++++++++++++.++++.|.+++.+.+||+|
T Consensus 79 pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd------------- 144 (172)
T 3lhh_A 79 PVCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD------------- 144 (172)
T ss_dssp EEESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC-------------
T ss_pred EEEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe-------------
Confidence 99986547999999999998864332 57899998 9999999999999999999999999999999
Q ss_pred CCcccccccCCCCCCCCcccccccccCCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhh
Q 013310 343 GKKPKLNEAKGGDCDLTAPLLSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLED 422 (445)
Q Consensus 343 ~di~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~D 422 (445)
++|+++||||.+|
T Consensus 145 -------------------------------------------------------------------~~g~lvGiit~~D 157 (172)
T 3lhh_A 145 -------------------------------------------------------------------EYGDLKGLVTLQD 157 (172)
T ss_dssp -------------------------------------------------------------------TTSCEEEEEEHHH
T ss_pred -------------------------------------------------------------------CCCCEEEEeeHHH
Confidence 6899999999999
Q ss_pred HHHHHhcCccCCCCc
Q 013310 423 VFEELLQEEIVDETD 437 (445)
Q Consensus 423 ile~l~g~ei~de~d 437 (445)
++++++| ++.||+|
T Consensus 158 il~~l~~-~~~de~~ 171 (172)
T 3lhh_A 158 MMDALTG-EFFQEDG 171 (172)
T ss_dssp HHHHHHT-TCC----
T ss_pred HHHHHhC-CCccccC
Confidence 9999997 9999875
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.93 E-value=5.4e-26 Score=201.55 Aligned_cols=138 Identities=22% Similarity=0.328 Sum_probs=126.0
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEe
Q 013310 186 LFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPV 265 (445)
Q Consensus 186 ~~s~eEl~~li~~~~~e~~~~g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV 265 (445)
.+|++||+.+++ +++++|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLR----QAHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHH----HHHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHH----hHHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 478999999998 45567999999999999999999999999999988899999999998 9999999999999999
Q ss_pred EeCCCCCEEEEEEhhhhhccCCC-CCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 266 YSGNPKNIIGLLLVKSLLTVRPE-TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 266 ~~~~~~~ivGiv~~kDll~~~~~-~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++++.++++|+|+.+|+++.... ...+++++| ++++++++++++.++++.|.+++.+.+||+|
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd 140 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVID 140 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEEC
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEEC
Confidence 98764599999999999987654 457889987 5688999999999999999999999999999
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.93 E-value=6e-26 Score=205.27 Aligned_cols=156 Identities=21% Similarity=0.302 Sum_probs=136.1
Q ss_pred hccCCCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhh
Q 013310 203 AGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSL 282 (445)
Q Consensus 203 ~~~~g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDl 282 (445)
+.++|.++++|++++.++++|.+.+|+++|+|+++++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 3456999999999999999999999999999988999999999998 999999999999999998755799999999999
Q ss_pred hccCCC-CCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCcc
Q 013310 283 LTVRPE-TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAP 361 (445)
Q Consensus 283 l~~~~~-~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~ 361 (445)
+..... ...+++ |++++++|++++++.++++.|.+++.+.+||+|
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd-------------------------------- 137 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD-------------------------------- 137 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC--------------------------------
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe--------------------------------
Confidence 876422 245677 578899999999999999999999999999999
Q ss_pred cccccccCCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHhcCccCCCCccccc
Q 013310 362 LLSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDETDEYVD 441 (445)
Q Consensus 362 ~~~~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~g~ei~de~d~~~~ 441 (445)
++|+++||||.+||+++++| ++.||+|.+.-
T Consensus 138 ------------------------------------------------e~g~lvGiIT~~Dil~~l~~-~i~de~~~~~~ 168 (173)
T 3ocm_A 138 ------------------------------------------------EFGAIEGLVTPIDVFEAIAG-EFPDEDELPDI 168 (173)
T ss_dssp ------------------------------------------------TTCCEEEEECHHHHHHHHHC-CCCCTTSCC--
T ss_pred ------------------------------------------------CCCCEEEEEeHHHHHHHHhC-cCCCccccHhh
Confidence 68999999999999999998 99999886543
Q ss_pred c
Q 013310 442 V 442 (445)
Q Consensus 442 ~ 442 (445)
+
T Consensus 169 ~ 169 (173)
T 3ocm_A 169 V 169 (173)
T ss_dssp -
T ss_pred H
Confidence 3
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.91 E-value=8.3e-25 Score=191.66 Aligned_cols=123 Identities=18% Similarity=0.361 Sum_probs=98.9
Q ss_pred cCCCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhc
Q 013310 205 KGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT 284 (445)
Q Consensus 205 ~~g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~ 284 (445)
++|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|+++
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 35899999999999999999999999999988899999999998 99999999999999999875479999999999987
Q ss_pred cCCCC-CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 285 VRPET-ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 285 ~~~~~-~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
....+ ..+++++| ++++++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 125 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVD 125 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe
Confidence 64333 57899998 8999999999999999999999999999999
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.90 E-value=6.5e-25 Score=193.72 Aligned_cols=149 Identities=28% Similarity=0.428 Sum_probs=123.7
Q ss_pred CCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeE-eCCCCCEEEEEEhhhhhccC
Q 013310 208 ELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVY-SGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 208 ~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~-~~~~~~ivGiv~~kDll~~~ 286 (445)
.++++|++++++++++.+.+|+++|+|+++++++++++++. ++++.|.+++++++||+ +++.++++|+|+.+|+++..
T Consensus 2 ~l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~ 80 (153)
T 3oco_A 2 NADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQA 80 (153)
T ss_dssp ------CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHH
T ss_pred CcCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHH
Confidence 36778999999999999999999999988899999999998 99999999999999999 54447899999999998754
Q ss_pred CC-CCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCcccccc
Q 013310 287 PE-TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSK 365 (445)
Q Consensus 287 ~~-~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~ 365 (445)
.. ...+++++| ++++++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------------------------------------ 123 (153)
T 3oco_A 81 RIDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID------------------------------------ 123 (153)
T ss_dssp HHHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC------------------------------------
T ss_pred hcCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe------------------------------------
Confidence 32 257899998 9999999999999999999999999999999
Q ss_pred cccCCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHhcCccCCCCccc
Q 013310 366 QDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDETDEY 439 (445)
Q Consensus 366 ~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~g~ei~de~d~~ 439 (445)
++|+++||||.+|++++++| ++.||+|++
T Consensus 124 --------------------------------------------~~g~~vGivt~~dil~~l~~-~~~de~~~~ 152 (153)
T 3oco_A 124 --------------------------------------------EYGGTSGIITDKDVYEELFG-NLRDEQDDE 152 (153)
T ss_dssp --------------------------------------------TTSCEEEEECHHHHHHHHHC----------
T ss_pred --------------------------------------------CCCCEEEEeeHHHHHHHHhc-cCCCcccCC
Confidence 68999999999999999998 999998864
No 6
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.88 E-value=1e-22 Score=176.06 Aligned_cols=132 Identities=30% Similarity=0.486 Sum_probs=109.6
Q ss_pred ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC---CCCCccccccccCC
Q 013310 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP---ETETPVSAVSIRRI 301 (445)
Q Consensus 225 ~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~---~~~~~v~~im~~~~ 301 (445)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++... ....+++++| +++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~~ 79 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RPA 79 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BCC
T ss_pred CCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CCC
Confidence 578999999988899999999998 99999999999999999875469999999999998643 2346889987 558
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCcccccccccCCCceEeeccCCC
Q 013310 302 PRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTESVVVDVDRPL 381 (445)
Q Consensus 302 ~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~i 381 (445)
+++++++++.++++.|.+++.+.+||+|
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---------------------------------------------------- 107 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVID---------------------------------------------------- 107 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEEC----------------------------------------------------
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEe----------------------------------------------------
Confidence 9999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHhcCccCCCCccc
Q 013310 382 SSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQEEIVDETDEY 439 (445)
Q Consensus 382 ~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~g~ei~de~d~~ 439 (445)
++|+++||||.+|++++++| ++.||+|.+
T Consensus 108 ----------------------------~~g~lvGiit~~Dil~~l~~-~~~de~~~~ 136 (136)
T 3lfr_A 108 ----------------------------EYGGVAGLVTIEDVLEQIVG-DIEDEHDVE 136 (136)
T ss_dssp ----------------------------TTSCEEEEEEHHHHHTTC------------
T ss_pred ----------------------------CCCCEEEEEEHHHHHHHHhC-CCcCcccCC
Confidence 68999999999999999998 999998753
No 7
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.87 E-value=6.7e-22 Score=169.23 Aligned_cols=105 Identities=31% Similarity=0.490 Sum_probs=94.7
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCCc
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIP 302 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~~ 302 (445)
..+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|+++.......+++++| ++++
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999988899999999998 999999999999999998754799999999999987655567899986 5688
Q ss_pred eeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 303 RVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 303 ~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++++++++.++++.|.+++.+.+||+|
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd 106 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVID 106 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEEC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999999999999999
No 8
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.86 E-value=5.7e-22 Score=176.07 Aligned_cols=103 Identities=19% Similarity=0.292 Sum_probs=90.6
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC--------CCCccc
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--------TETPVS 294 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~--------~~~~v~ 294 (445)
|-..+++++|+|+.+++++++++|+. ++++.|.+++++++||+|++ ++++|+++.+|++++... ...+++
T Consensus 12 ~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~ 89 (156)
T 3k6e_A 12 FLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMADTDIV 89 (156)
T ss_dssp HHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGG
T ss_pred HhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccccccccCHH
Confidence 34457999999999999999999998 99999999999999999865 799999999999764321 246899
Q ss_pred cccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 295 AVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 295 ~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++|.++++++++++++.++++.|.+++ ++||+|
T Consensus 90 ~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd 122 (156)
T 3k6e_A 90 HMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp GTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEEC
T ss_pred HhhcCCceecccccHHHHHHHHHHHcC--CeEEEe
Confidence 999999999999999999999998775 599999
No 9
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.86 E-value=6.6e-22 Score=169.74 Aligned_cols=103 Identities=20% Similarity=0.357 Sum_probs=92.2
Q ss_pred ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCC----CCccccccccC
Q 013310 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPET----ETPVSAVSIRR 300 (445)
Q Consensus 225 ~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~----~~~v~~im~~~ 300 (445)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|++++..++ ..+++++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999988899999999998 9999999999999999976557999999999998765442 24678887 88
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 301 ~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++++++++++.++++.|.+++.+.+||+|
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 107 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVD 107 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEEC
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEc
Confidence 89999999999999999999999999999
No 10
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.84 E-value=2.3e-21 Score=166.02 Aligned_cols=106 Identities=25% Similarity=0.350 Sum_probs=91.7
Q ss_pred cCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC--CCCcccccccc
Q 013310 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--TETPVSAVSIR 299 (445)
Q Consensus 222 ~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~--~~~~v~~im~~ 299 (445)
+|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|+++.... ...+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 467899999999988888999999998 999999999999999998754799999999999876432 246789997 6
Q ss_pred CCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 300 ~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 109 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVD 109 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEc
Confidence 788999999999999999999999999999
No 11
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.83 E-value=1.3e-20 Score=160.66 Aligned_cols=103 Identities=30% Similarity=0.470 Sum_probs=91.9
Q ss_pred ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC--CCCccccccccCCc
Q 013310 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--TETPVSAVSIRRIP 302 (445)
Q Consensus 225 ~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~--~~~~v~~im~~~~~ 302 (445)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|+++.... ...+++++| +++.
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~~ 79 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTAV 79 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCCC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCCe
Confidence 578999999877899999999998 999999999999999998754799999999999976432 346889987 5678
Q ss_pred eeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 303 RVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 303 ~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++++++++.++++.|.+++.+.+||+|
T Consensus 80 ~v~~~~~l~~a~~~m~~~~~~~lpVvd 106 (127)
T 3nqr_A 80 VVPESKRVDRMLKEFRSQRYHMAIVID 106 (127)
T ss_dssp EEETTCBHHHHHHHHHHTTCCEEEEEC
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999999999999999
No 12
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.83 E-value=6e-20 Score=170.43 Aligned_cols=127 Identities=6% Similarity=0.065 Sum_probs=113.4
Q ss_pred ccHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHc---CCcEE
Q 013310 187 FRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILAR---GHSRV 263 (445)
Q Consensus 187 ~s~eEl~~li~~~~~e~~~~g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~---~~s~~ 263 (445)
+.+++.+.++. .++++|++++++++.+.+.+|+++|++ +++++++++++. ++++.|.++ +++.+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 45566666664 468999999999999999999999996 788999999998 999999987 78999
Q ss_pred EeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 264 PVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 264 PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
||++++ ++++|+|+.+|++... .+.+++++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 92 ~Vvd~~-~~lvGivt~~dll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD 154 (205)
T 3kxr_A 92 FIVDEA-DKYLGTVRRYDIFKHE--PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVID 154 (205)
T ss_dssp EEECTT-CBEEEEEEHHHHTTSC--TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC
T ss_pred EEEcCC-CeEEEEEEHHHHHhCC--CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc
Confidence 999864 8999999999998753 35789999989999999999999999999999999999999
No 13
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.81 E-value=4e-21 Score=190.35 Aligned_cols=210 Identities=10% Similarity=0.133 Sum_probs=159.8
Q ss_pred CCCHHHHHHHHHhhcCc-ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 208 ELTHDETTIISGALDLT-EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 208 ~l~~~E~~~l~~~~~l~-~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
.++++|+++++++++|- +.+|+|+|+|+.++++++.++++. ++++.|.+++++++||++++.++++|+++.+|++...
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 45678899999999954 499999999999999999999998 9999999999999999997667999999999998642
Q ss_pred C--------CC------CCccc-------cccccCC--ceeCCCCCHHHHHHHHhhCCCeEEEEEccCCC-----ccCCC
Q 013310 287 P--------ET------ETPVS-------AVSIRRI--PRVPSDMPLYDILNEFQKGSSHMAAVVKAKGK-----SKTLP 338 (445)
Q Consensus 287 ~--------~~------~~~v~-------~im~~~~--~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~-----~~Giv 338 (445)
. .. ..++. ++|.+++ +++++++++.++++.|.+++.+.+||+|++|+ +.|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Giv 161 (334)
T 2qrd_G 82 KYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVL 161 (334)
T ss_dssp HHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEE
T ss_pred HHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEe
Confidence 1 11 22222 2366777 89999999999999999999999999999876 99999
Q ss_pred CCCCCCcccccccCCCCCC-CCccccccc-ccCCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEE
Q 013310 339 PMTDGKKPKLNEAKGGDCD-LTAPLLSKQ-DEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIG 416 (445)
Q Consensus 339 ~~T~~di~~~i~~~~~~~~-~~~~~~~~~-~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~G 416 (445)
|.+|+++.+........ ...+..... .+....+.++++.++.+..+.+........-+++ ++|+++|
T Consensus 162 --t~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd---------~~~~~~G 230 (334)
T 2qrd_G 162 --TQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVN---------SEGTLLN 230 (334)
T ss_dssp --EHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---------TTCBEEE
T ss_pred --eHHHHHHHHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEc---------CCCcEEE
Confidence 99999887754321100 011111100 1234556788888888887777654332222333 5789999
Q ss_pred EeehhhHHHHHhc
Q 013310 417 IITLEDVFEELLQ 429 (445)
Q Consensus 417 IVT~~Dile~l~g 429 (445)
+||..|+++.+.+
T Consensus 231 iit~~dl~~~~~~ 243 (334)
T 2qrd_G 231 VYESVDVMHLIQD 243 (334)
T ss_dssp EEETHHHHHHHTT
T ss_pred EEEHHHHHHHhhc
Confidence 9999999998875
No 14
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.81 E-value=9.4e-20 Score=163.44 Aligned_cols=111 Identities=16% Similarity=0.260 Sum_probs=96.1
Q ss_pred HHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC----
Q 013310 213 ETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---- 288 (445)
Q Consensus 213 E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~---- 288 (445)
+++.+.+. +++++|+|+|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++....
T Consensus 7 ~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~~ 80 (170)
T 4esy_A 7 RRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWIY 80 (170)
T ss_dssp HHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTHH
T ss_pred HHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhcccc
Confidence 34444443 467899999985 789999999998 99999999999999999875 899999999999875422
Q ss_pred ----------------------CCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 289 ----------------------TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 289 ----------------------~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
...+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd 143 (170)
T 4esy_A 81 EASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ 143 (170)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE
T ss_pred chhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE
Confidence 12478899999999999999999999999999999999998
No 15
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.80 E-value=3.6e-21 Score=190.49 Aligned_cols=212 Identities=12% Similarity=0.190 Sum_probs=156.2
Q ss_pred ccCCCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhh
Q 013310 204 GKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLL 283 (445)
Q Consensus 204 ~~~g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll 283 (445)
+++|.+++.+++.+.+. |.+.+|+|+|+|+.++++++.++++. ++++.|.+++++++||++++.++++|+++.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 34577777777777777 56889999999999999999999998 9999999999999999998657899999999997
Q ss_pred ccCCC------------CCC-------ccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEcc-CCCccCCCCCCCC
Q 013310 284 TVRPE------------TET-------PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA-KGKSKTLPPMTDG 343 (445)
Q Consensus 284 ~~~~~------------~~~-------~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde-~G~~~Giv~~T~~ 343 (445)
..... ... +++++|.++++++++++++.++++.|.+++.+.+||+|+ +|+++|++ |.+
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Giv--t~~ 169 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYIL--THK 169 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEE--CHH
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEE--cHH
Confidence 63211 011 234667889999999999999999999999999999999 99999999 999
Q ss_pred CcccccccCCCCCCC---C-cccccccccC-CCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEe
Q 013310 344 KKPKLNEAKGGDCDL---T-APLLSKQDEK-TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGII 418 (445)
Q Consensus 344 di~~~i~~~~~~~~~---~-~~~~~~~~~~-~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIV 418 (445)
|+++.+.......+. . .+........ ...+.++++.++.+..+.+........-+++ ++|+++|+|
T Consensus 170 dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---------~~~~l~Gii 240 (330)
T 2v8q_E 170 RILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVD---------EKGRVVDIY 240 (330)
T ss_dssp HHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEEC---------TTSBEEEEE
T ss_pred HHHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEEC---------CCCcEEEEE
Confidence 999877543222111 0 1100111111 4556788888888888777654332222233 578999999
Q ss_pred ehhhHHHHHhc
Q 013310 419 TLEDVFEELLQ 429 (445)
Q Consensus 419 T~~Dile~l~g 429 (445)
|..|+++.+.+
T Consensus 241 t~~dl~~~~~~ 251 (330)
T 2v8q_E 241 SKFDVINLAAE 251 (330)
T ss_dssp EGGGTGGGGGS
T ss_pred EHHHHHHHHhc
Confidence 99999998774
No 16
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.79 E-value=3.5e-21 Score=189.88 Aligned_cols=213 Identities=11% Similarity=0.152 Sum_probs=162.9
Q ss_pred cCCCCCHHHHHHHHHhhcC-cccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhh
Q 013310 205 KGGELTHDETTIISGALDL-TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLL 283 (445)
Q Consensus 205 ~~g~l~~~E~~~l~~~~~l-~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll 283 (445)
+.|.++++|+++++++++| .+.+|+|+|+|+.++++++.+.|+. ++++.|.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 3467788999999999999 9999999999999999999999998 9999999999999999998767999999999987
Q ss_pred ccCC----CC----------CCccc------cccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCC-----ccCCC
Q 013310 284 TVRP----ET----------ETPVS------AVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGK-----SKTLP 338 (445)
Q Consensus 284 ~~~~----~~----------~~~v~------~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~-----~~Giv 338 (445)
.... .. ...+. ++|.++++++++++++.++++.|.+++.+.+||+|++|. +.|++
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Giv 166 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVL 166 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEE
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEe
Confidence 6421 00 01122 344678899999999999999999999999999999987 99999
Q ss_pred CCCCCCcccccccCCCCCCC-Ccccccc-cccCCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEE
Q 013310 339 PMTDGKKPKLNEAKGGDCDL-TAPLLSK-QDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIG 416 (445)
Q Consensus 339 ~~T~~di~~~i~~~~~~~~~-~~~~~~~-~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~G 416 (445)
|.+|+++.+.+....... ..+.... ..+....+.++++.++.+..+.+........-+++ ++|+++|
T Consensus 167 --t~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd---------~~~~~~G 235 (323)
T 3t4n_C 167 --TQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID---------ENGYLIN 235 (323)
T ss_dssp --EHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---------TTCBEEE
T ss_pred --cHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEEC---------CCCeEEE
Confidence 999999876543322111 1111111 11234556788888888888877654333222333 5799999
Q ss_pred EeehhhHHHHHhc
Q 013310 417 IITLEDVFEELLQ 429 (445)
Q Consensus 417 IVT~~Dile~l~g 429 (445)
+||..|+++.+.+
T Consensus 236 iit~~dl~~~~~~ 248 (323)
T 3t4n_C 236 VYEAYDVLGLIKG 248 (323)
T ss_dssp EEETTHHHHHHHT
T ss_pred EEeHHHHHHHHhh
Confidence 9999999998875
No 17
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.79 E-value=7e-19 Score=170.64 Aligned_cols=138 Identities=14% Similarity=0.123 Sum_probs=115.9
Q ss_pred cccHHHHHHHHHHhhhh---hcc--CCCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHc--
Q 013310 186 LFRRAQLKALVTIHSQE---AGK--GGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILAR-- 258 (445)
Q Consensus 186 ~~s~eEl~~li~~~~~e---~~~--~g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~-- 258 (445)
.++.+++..+++...++ ..+ -|.++.+++..+.+++.+.+.+|+++|++ ++++++++.++. ++++.|.++
T Consensus 90 ~l~~d~~~~ll~~l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~ 166 (278)
T 2yvy_A 90 ELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAP 166 (278)
T ss_dssp HSCHHHHHHHHHHHHHHCHHHHHHHHHHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTT
T ss_pred cCCHHHHHHHHHhCCCccHHHHHHHHHcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccC
Confidence 34556666666532211 000 04678899999999999999999999996 788999999998 999999987
Q ss_pred ---CCcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 259 ---GHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 259 ---~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
+++++||++++ ++++|+|+.+|++... .+.+++++|.+++++|++++++.++++.|++++.+.+||+|
T Consensus 167 ~~~~~~~~~Vvd~~-~~lvGivt~~dll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 237 (278)
T 2yvy_A 167 DAETIYYIYVVDEK-GRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 237 (278)
T ss_dssp TCSCSSEEEEECTT-CBEEEEEEHHHHHHSC--TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CccceeEEEEECCC-CCEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 78999999875 8999999999998753 35789999989999999999999999999999999999999
No 18
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.77 E-value=3e-18 Score=178.26 Aligned_cols=134 Identities=14% Similarity=0.135 Sum_probs=119.5
Q ss_pred cccHHHHHHHHHHhhhhhccC---------CCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHH
Q 013310 186 LFRRAQLKALVTIHSQEAGKG---------GELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKIL 256 (445)
Q Consensus 186 ~~s~eEl~~li~~~~~e~~~~---------g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~ 256 (445)
.++++|+..+++.. .++ +.++.++++.+.+++++.+.+|+++|++ +++++++++++. ++++.++
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 46788888888732 234 7899999999999999999999999996 799999999998 9999999
Q ss_pred Hc-----CCcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 257 AR-----GHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 257 ~~-----~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++ +++++||+|++ ++++|+++.+|++... .+.+++++|.++++++++++++.++++.|++++.+.+||+|
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~--~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD 257 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 257 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSC--TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc
Confidence 86 47899999875 8999999999998752 35789999989999999999999999999999999999999
No 19
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.77 E-value=7.3e-20 Score=178.18 Aligned_cols=217 Identities=16% Similarity=0.153 Sum_probs=165.3
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEE
Q 013310 185 ALFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVP 264 (445)
Q Consensus 185 ~~~s~eEl~~li~~~~~e~~~~g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~P 264 (445)
-.+|.+||...+.. +. ...+...+.+++.+.+|+++|++ +++++++++++. ++++.|.+++++++|
T Consensus 63 GivT~~Di~~~~~~--------~~---~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lp 128 (296)
T 3ddj_A 63 GLLTTRDLLSTVES--------YC---KDSCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLP 128 (296)
T ss_dssp EEEEHHHHHGGGTT--------CC------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEE
T ss_pred EEEeHHHHHHHhcc--------cc---cccccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEE
Confidence 35788887776631 10 00334555566678899999997 678899999998 999999999999999
Q ss_pred eEeCCCCCEEEEEEhhhhhccCCC--CCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCC
Q 013310 265 VYSGNPKNIIGLLLVKSLLTVRPE--TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTD 342 (445)
Q Consensus 265 V~~~~~~~ivGiv~~kDll~~~~~--~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~ 342 (445)
|+|++ ++++|+++.+|+++.... ...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|++ |.
T Consensus 129 Vvd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Giv--t~ 205 (296)
T 3ddj_A 129 VVDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIV--TV 205 (296)
T ss_dssp EECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EH
T ss_pred EEcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEE--EH
Confidence 99865 799999999999875432 24689999989999999999999999999999999999999999999999 99
Q ss_pred CCcccccccCCCCCC----CCcccccccccCCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEe
Q 013310 343 GKKPKLNEAKGGDCD----LTAPLLSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGII 418 (445)
Q Consensus 343 ~di~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIV 418 (445)
+|+++.+......-. ...+ ....+....+.++++.++.+..+.+........-+++ ++|+++|+|
T Consensus 206 ~dl~~~~~~~~~~~~~~~~~~~~--v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd---------~~g~~~Gii 274 (296)
T 3ddj_A 206 VNAIKQLAKAVDKLDPDYFYGKV--VKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILN---------KDNTIRGII 274 (296)
T ss_dssp HHHHHHHHHHHHHTCTHHHHTCB--HHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEEC---------TTSCEEEEE
T ss_pred HHHHHHHHHHHhhcChhhhcCcC--HHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEC---------CCCeEEEEE
Confidence 999887752111000 0011 1112223556788888888888877765443333334 689999999
Q ss_pred ehhhHHHHHhc
Q 013310 419 TLEDVFEELLQ 429 (445)
Q Consensus 419 T~~Dile~l~g 429 (445)
|.+|+++++.+
T Consensus 275 t~~Dil~~l~~ 285 (296)
T 3ddj_A 275 TERDLLIALHH 285 (296)
T ss_dssp EHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99999999986
No 20
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.75 E-value=6.7e-18 Score=148.58 Aligned_cols=108 Identities=19% Similarity=0.228 Sum_probs=91.0
Q ss_pred HHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC---------
Q 013310 218 SGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--------- 288 (445)
Q Consensus 218 ~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~--------- 288 (445)
.+...+.+.+|+++|+|+.++++++++.++. ++++.|.+++++++||++++ ++++|+++.+|+++....
T Consensus 3 ~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~ 80 (157)
T 2emq_A 3 WEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFERL 80 (157)
T ss_dssp -------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGGG
T ss_pred hhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHHh
Confidence 4555678899999999766788999999998 99999999999999999864 789999999999876432
Q ss_pred CCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 289 TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 289 ~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
...++.++|.++++++++++++.++++.|.+++. +||+|
T Consensus 81 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd 119 (157)
T 2emq_A 81 ETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN 119 (157)
T ss_dssp GTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEEC
T ss_pred cCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEc
Confidence 2468999998999999999999999999999976 99998
No 21
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.74 E-value=3e-18 Score=150.97 Aligned_cols=107 Identities=19% Similarity=0.262 Sum_probs=93.5
Q ss_pred HhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC--------CC
Q 013310 219 GALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--------TE 290 (445)
Q Consensus 219 ~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~--------~~ 290 (445)
+..++...+|+++|+|..+++++++++++. ++++.|.+++++++||+|++ ++++|+++.+|+++.... ..
T Consensus 8 ~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~ 85 (156)
T 3ctu_A 8 EFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMAD 85 (156)
T ss_dssp HHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHTT
T ss_pred HHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhcccccccccc
Confidence 444566778999999988999999999998 99999999999999999865 899999999999875422 14
Q ss_pred CccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 291 TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 291 ~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
.+++++|.++++++++++++.++++.|.+++ .+||+|
T Consensus 86 ~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd 122 (156)
T 3ctu_A 86 TDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp SBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC
T ss_pred CcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc
Confidence 7899999899999999999999999999886 699999
No 22
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.74 E-value=7.2e-20 Score=176.03 Aligned_cols=218 Identities=14% Similarity=0.163 Sum_probs=159.5
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEE
Q 013310 185 ALFRRAQLKALVTIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVP 264 (445)
Q Consensus 185 ~~~s~eEl~~li~~~~~e~~~~g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~P 264 (445)
-.+|.+||...+... ...+.+. .....++++..+.+|+++|++ +++++++++++. ++++.|.+++++++|
T Consensus 50 Givt~~di~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~ 119 (280)
T 3kh5_A 50 GIITSMDIVDFMGGG----SKYNLIR---EKHERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAP 119 (280)
T ss_dssp EEEEHHHHHHHTTTS----GGGHHHH---TTSTTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEE
T ss_pred EEEEHHHHHHHhccc----chhhhhh---hccccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEE
Confidence 357888988876411 1111111 111122333346799999986 688999999998 999999999999999
Q ss_pred eEeCCCCCEEEEEEhhhhhccCCC---CCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCC
Q 013310 265 VYSGNPKNIIGLLLVKSLLTVRPE---TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMT 341 (445)
Q Consensus 265 V~~~~~~~ivGiv~~kDll~~~~~---~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T 341 (445)
|+|++ ++++|+++.+|+++.... ...+++++|.+++.++++++++.++++.|.+++.+.+||+ ++|++.|++ |
T Consensus 120 Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Giv--t 195 (280)
T 3kh5_A 120 IVNDE-NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGII--T 195 (280)
T ss_dssp EECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEE--E
T ss_pred EEcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEE--E
Confidence 99875 899999999999875322 2347899998999999999999999999999999999999 789999999 9
Q ss_pred CCCcccccccCCCCCC---------CCcccccccccCCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCC
Q 013310 342 DGKKPKLNEAKGGDCD---------LTAPLLSKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDG 412 (445)
Q Consensus 342 ~~di~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g 412 (445)
.+|+++.+......+. ...+ ...-.....+.++++.++.+..+.|........-+++ ++|
T Consensus 196 ~~dl~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd---------~~g 264 (280)
T 3kh5_A 196 STDFIKLLGSDWAFNHMQTGNVREITNVR--MEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVD---------ENL 264 (280)
T ss_dssp HHHHHHHHTSHHHHHHHHSCCTHHHHHCB--HHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEEC---------TTC
T ss_pred HHHHHHHHhhhhhhhhhcccchhhhhCCc--HHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEEC---------CCC
Confidence 9999987753211000 0011 0111234556788888888888877765443333334 578
Q ss_pred ceEEEeehhhHHHHH
Q 013310 413 EVIGIITLEDVFEEL 427 (445)
Q Consensus 413 ~l~GIVT~~Dile~l 427 (445)
+++|+||.+|+++.+
T Consensus 265 ~~~Givt~~dil~~l 279 (280)
T 3kh5_A 265 RIKGIITEKDVLKYF 279 (280)
T ss_dssp BEEEEEEHHHHGGGG
T ss_pred eEEEEEeHHHHHHhh
Confidence 999999999999875
No 23
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.73 E-value=1.8e-18 Score=166.27 Aligned_cols=182 Identities=13% Similarity=0.181 Sum_probs=143.0
Q ss_pred ccccc-cccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCC----------------
Q 013310 227 TAEEA-MTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPET---------------- 289 (445)
Q Consensus 227 ~V~di-Mtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~---------------- 289 (445)
++++. |++ +++++++++|+. ++++.|.+++++++||++++.++++|+++.+|++......
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHH
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhH
Confidence 45554 553 789999999998 9999999999999999986458999999999998754221
Q ss_pred --CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCcccccccc
Q 013310 290 --ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQD 367 (445)
Q Consensus 290 --~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~ 367 (445)
+.+++++|.++++++++++++.++++.|.+++.+.+||+|++|+++|++ |.+|+++.+.+....+. + ....
T Consensus 81 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Giv--t~~dl~~~~~~~~~~~~---~--v~~~ 153 (280)
T 3kh5_A 81 AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLI--TERDVIRALLDKIDENE---V--IDDY 153 (280)
T ss_dssp HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEE--EHHHHHHHHGGGSCTTC---B--SGGG
T ss_pred HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEE--EHHHHHHHHhhcCCCCC---C--HHHH
Confidence 3578999999999999999999999999999999999999999999999 99999987765443221 1 0111
Q ss_pred cCCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHh
Q 013310 368 EKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (445)
Q Consensus 368 ~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~ 428 (445)
.....+.++++.++.+..+.+....... +++. ++|+++|+||.+|+++.+.
T Consensus 154 m~~~~~~v~~~~~l~~~~~~~~~~~~~~------~~Vv----~~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 154 ITRDVIVATPGERLKDVARTMVRNGFRR------LPVV----SEGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp CBCSCCCBCTTCBHHHHHHHHHHHTCSE------EEEE----ETTEEEEEEEHHHHHHHHT
T ss_pred hCCCCeEECCCCcHHHHHHHHHHcCCCE------EEEE----ECCEEEEEEEHHHHHHHHh
Confidence 2234566788888888777766543322 2222 3799999999999999875
No 24
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.73 E-value=1.6e-17 Score=144.81 Aligned_cols=104 Identities=19% Similarity=0.173 Sum_probs=92.3
Q ss_pred cccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC----------------
Q 013310 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP---------------- 287 (445)
Q Consensus 224 ~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~---------------- 287 (445)
...+|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4578999999877899999999998 99999999999999999875 79999999999986421
Q ss_pred -CCCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 288 -ETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 288 -~~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
....++.++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd 123 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD 123 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 123688999988899999999999999999999999999999
No 25
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.73 E-value=6.6e-18 Score=147.62 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=92.5
Q ss_pred cCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC---------CCCc
Q 013310 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---------TETP 292 (445)
Q Consensus 222 ~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~---------~~~~ 292 (445)
.|.+.+|+++|+|..+++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++.... ...+
T Consensus 11 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 88 (150)
T 3lqn_A 11 EFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEEMK 88 (150)
T ss_dssp HHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGGCB
T ss_pred hhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhcCC
Confidence 456789999999877889999999998 99999999999999999865 899999999999876431 2468
Q ss_pred cccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 293 VSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 293 v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++++|.++++++++++++.++++.|.+++. +||+|
T Consensus 89 v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd 123 (150)
T 3lqn_A 89 VEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN 123 (150)
T ss_dssp GGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC
T ss_pred HHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC
Confidence 999999999999999999999999999876 99999
No 26
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.72 E-value=3.7e-17 Score=159.23 Aligned_cols=117 Identities=18% Similarity=0.193 Sum_probs=107.2
Q ss_pred CCCCHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHc-----CCcEEEeEeCCCCCEEEEEEhhh
Q 013310 207 GELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILAR-----GHSRVPVYSGNPKNIIGLLLVKS 281 (445)
Q Consensus 207 g~l~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~-----~~s~~PV~~~~~~~ivGiv~~kD 281 (445)
+.++.+++..+.+++.+.+.+|+++|++ +++++++++++. ++++.|.++ +++++||++++ ++++|+|+.+|
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~d 193 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRD 193 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHH
Confidence 3678889999999999999999999986 688999999998 999999987 88999999875 89999999999
Q ss_pred hhccCCCCCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 282 LLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 282 ll~~~~~~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++... ...+++++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 194 ll~~~--~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd 239 (286)
T 2oux_A 194 LIVND--DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD 239 (286)
T ss_dssp HTTSC--TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHcCC--CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 98753 35789999989999999999999999999999999999999
No 27
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.72 E-value=1.1e-17 Score=140.82 Aligned_cols=100 Identities=11% Similarity=0.227 Sum_probs=91.0
Q ss_pred cccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCCceeC
Q 013310 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVP 305 (445)
Q Consensus 226 ~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~~~V~ 305 (445)
.+|+++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+++.+|+++....+..+++++|.+++.+++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 378999986 578899999998 99999999999999999865 89999999999998655555689999989999999
Q ss_pred CCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 306 SDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 306 ~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
+++++.++++.|.+++.+.+||+|
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd 100 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVD 100 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHhCCCeEEEEC
Confidence 999999999999999999999999
No 28
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.72 E-value=4.7e-17 Score=139.97 Aligned_cols=104 Identities=13% Similarity=0.235 Sum_probs=91.6
Q ss_pred hcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhc-cCCC---CCCccccc
Q 013310 221 LDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT-VRPE---TETPVSAV 296 (445)
Q Consensus 221 ~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~-~~~~---~~~~v~~i 296 (445)
+.|.+.+|+++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+++.+|+++ .... ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999985 688999999998 99999999999999999864 79999999999973 3322 24689999
Q ss_pred cccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 297 SIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 297 m~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
|.+++.++++++++.++++.|.+++.+.+ |+|
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd 109 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIE 109 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC
Confidence 98999999999999999999999999999 998
No 29
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=1.3e-17 Score=148.58 Aligned_cols=110 Identities=12% Similarity=0.174 Sum_probs=97.3
Q ss_pred HHhhcCcccccccccccC-CceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC-----CCC
Q 013310 218 SGALDLTEKTAEEAMTPI-ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TET 291 (445)
Q Consensus 218 ~~~~~l~~~~V~diMtpr-~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~ 291 (445)
.....+...+|+++|+|+ .+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|+++.... ...
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 93 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQ 93 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTS
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccC
Confidence 345667889999999974 4688999999998 99999999999999999865 799999999999875321 247
Q ss_pred ccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 292 ~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 94 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (165)
T 3fhm_A 94 SVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE 131 (165)
T ss_dssp BGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 89999999999999999999999999999999999999
No 30
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.71 E-value=4.3e-17 Score=138.74 Aligned_cols=101 Identities=14% Similarity=0.194 Sum_probs=91.4
Q ss_pred cccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCCC---CccccccccC
Q 013310 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETE---TPVSAVSIRR 300 (445)
Q Consensus 224 ~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~---~~v~~im~~~ 300 (445)
...+|+++|++ ++.++++++++. ++++.|.+++++.+||+++ ++++|+++.+|+++...++. .+++++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 46799999986 578899999998 9999999999999999986 79999999999998755432 5699999999
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 301 ~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
+.++++++++.++++.|.+++.+.+||+|
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd 106 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLAD 106 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEEC
Confidence 99999999999999999999999999999
No 31
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.71 E-value=6.2e-18 Score=164.50 Aligned_cols=185 Identities=20% Similarity=0.191 Sum_probs=149.1
Q ss_pred hcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC------------
Q 013310 221 LDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE------------ 288 (445)
Q Consensus 221 ~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~------------ 288 (445)
.+....+|+|+|++ +++++++++++. ++++.|.+++++++||++ ++++|+++.+|+++....
T Consensus 15 ~~~~~~~V~dim~~--~~~~v~~~~~v~-~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~~~~~~~~~ 88 (296)
T 3ddj_A 15 LYFQGMNIETLMIK--NPPILSKEDRLG-SAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKDSCSQGDLY 88 (296)
T ss_dssp CTTCCSSGGGTCEE--SCCEECTTSBHH-HHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC---CCHHHHH
T ss_pred hhhcccCHHHhccC--CCcEECCCccHH-HHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccccccchhhH
Confidence 34567899999986 688999999998 999999999999999997 789999999999986531
Q ss_pred --CCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCccccccc
Q 013310 289 --TETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQ 366 (445)
Q Consensus 289 --~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~ 366 (445)
.+.+++++|.++++++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+++.+....... +.. .
T Consensus 89 ~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGiv--t~~dl~~~~~~~~~~~----~v~--~ 160 (296)
T 3ddj_A 89 HISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIV--TEREFLLLYKDLDEIF----PVK--V 160 (296)
T ss_dssp HHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EHHHHGGGGGGSCCCC----BHH--H
T ss_pred HHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEE--eHHHHHHhhhcccccc----cHH--H
Confidence 13679999999999999999999999999999999999999999999999 9999998765433221 111 1
Q ss_pred ccCCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHh
Q 013310 367 DEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (445)
Q Consensus 367 ~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~ 428 (445)
-+......++++.++.+..+.+........-+++ ++|+++|+||.+|+++.+.
T Consensus 161 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---------~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 161 FMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVID---------DDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEEC---------TTSCEEEEEEHHHHHHHHH
T ss_pred hhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEc---------CCCEEEEEEEHHHHHHHHH
Confidence 1123456788888888887777654433333334 6899999999999999876
No 32
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.70 E-value=4.5e-18 Score=163.88 Aligned_cols=178 Identities=17% Similarity=0.201 Sum_probs=124.3
Q ss_pred cccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCCceeC
Q 013310 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVP 305 (445)
Q Consensus 226 ~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~~~V~ 305 (445)
++|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++.... +.+++++|.+++++++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECTT-CCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 368999985 688899999999 99999999999999999864 89999999999987543 4678999888889999
Q ss_pred CCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCccc-ccccCCCCCCCCcccccccccCCCceEeeccCCCccc
Q 013310 306 SDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPK-LNEAKGGDCDLTAPLLSKQDEKTESVVVDVDRPLSSG 384 (445)
Q Consensus 306 ~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~i~~~ 384 (445)
+++++.++++.|.+++.+.+||+|++|++.|++ |.+|+++ .+.+.... ...+. ..-+....+.++++.++.+.
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Gii--t~~di~~~~~~~~~~~--~~~~v--~~~m~~~~~~v~~~~~l~~~ 148 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGIL--TVGDIIRRYFAKSEKY--KGVEI--EPYYQRYVSIVWEGTPLKAA 148 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EHHHHHHHTTTTCSGG--GGCBS--TTTSBSCCCCEETTSBHHHH
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEE--EHHHHHHHHHhccCCc--ccCcH--HHHhCCCCEEECCCCCHHHH
Confidence 999999999999999999999999999999999 9999998 66543110 01111 11223456788999999888
Q ss_pred cccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHH
Q 013310 385 SMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVF 424 (445)
Q Consensus 385 ~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dil 424 (445)
.+.+........-+++ ++|+++|+||..|++
T Consensus 149 ~~~~~~~~~~~l~Vvd---------~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 149 LKALLLSNSMALPVVD---------SEGNLVGIVDETDLL 179 (282)
T ss_dssp HHHHHTCSSSEEEEEC---------TTSCEEEEEEGGGGG
T ss_pred HHHHHHcCCcEEEEEc---------CCCeEEEEEEHHHHh
Confidence 8877755432222223 578999999999999
No 33
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.70 E-value=3.9e-17 Score=146.66 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=91.7
Q ss_pred ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC------------------
Q 013310 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR------------------ 286 (445)
Q Consensus 225 ~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~------------------ 286 (445)
..+|+++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 368999999877899999999998 99999999999999999875 7999999999998531
Q ss_pred -------------CCCCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 287 -------------PETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 287 -------------~~~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
.....+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 136 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD 136 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 1124678999988899999999999999999999999999999
No 34
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.69 E-value=7.6e-17 Score=137.78 Aligned_cols=102 Identities=16% Similarity=0.236 Sum_probs=91.0
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC---CCCcccccccc
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---TETPVSAVSIR 299 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~---~~~~v~~im~~ 299 (445)
|++.+|+++|++ +++++++++++. ++++.|.+++++++||++ + ++++|+++.+|+++.... ...+++++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999986 578899999998 999999999999999999 4 799999999999865322 24689999888
Q ss_pred CCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 300 ~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 105 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVD 105 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEEC
Confidence 999999999999999999999999999999
No 35
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.69 E-value=1.7e-17 Score=145.13 Aligned_cols=102 Identities=18% Similarity=0.191 Sum_probs=92.5
Q ss_pred cccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC----CCCccccccccCC
Q 013310 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE----TETPVSAVSIRRI 301 (445)
Q Consensus 226 ~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~----~~~~v~~im~~~~ 301 (445)
.+|+++|+++.+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|+++.... ...+++++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999866889999999998 99999999999999999865 799999999999875432 3468899998999
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 302 ~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
.++++++++.++++.|.+++.+.+||+|
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVAD 133 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEec
Confidence 9999999999999999999999999999
No 36
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.68 E-value=1.5e-16 Score=136.58 Aligned_cols=103 Identities=17% Similarity=0.318 Sum_probs=90.9
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhh-hccCCC---CCCccccccc
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSL-LTVRPE---TETPVSAVSI 298 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDl-l~~~~~---~~~~v~~im~ 298 (445)
|.+.+|+++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+++.+|+ ++.... ...+++++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 567899999985 678899999998 99999999999999999865 799999999999 765432 2468899998
Q ss_pred cCCceeCCCCCHHHHHHHHhhCC-----CeEEEEEc
Q 013310 299 RRIPRVPSDMPLYDILNEFQKGS-----SHMAAVVK 329 (445)
Q Consensus 299 ~~~~~V~~~~~l~~al~~m~~~~-----~~~a~Vvd 329 (445)
+++.++++++++.++++.|.+++ .+.+||+|
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd 116 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD 116 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC
Confidence 89999999999999999999999 99999999
No 37
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.68 E-value=6.1e-17 Score=143.09 Aligned_cols=104 Identities=18% Similarity=0.260 Sum_probs=91.5
Q ss_pred cCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC---------CCCc
Q 013310 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---------TETP 292 (445)
Q Consensus 222 ~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~---------~~~~ 292 (445)
.+.+.+|+++|+++.+++++++++++. ++++.|.+++++++||+|++ ++++|+++.+|++..... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 567789999999866788999999998 99999999999999999865 799999999999875322 2468
Q ss_pred cccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 293 VSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 293 v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
+.++|.+++.++++++++.++++.|.+++. +||+|
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd 122 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEN 122 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEEC
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEe
Confidence 899998899999999999999999998876 99999
No 38
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.68 E-value=1e-16 Score=137.40 Aligned_cols=100 Identities=14% Similarity=0.186 Sum_probs=89.6
Q ss_pred ccccccccC-CceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhc-cCC----CCCCccccccccC
Q 013310 227 TAEEAMTPI-ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT-VRP----ETETPVSAVSIRR 300 (445)
Q Consensus 227 ~V~diMtpr-~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~-~~~----~~~~~v~~im~~~ 300 (445)
+|+++|+|+ ++++++++++++. ++++.|.+++++++||++ + ++++|+++.+|+++ ... ....++.++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999965 6789999999998 999999999999999998 3 79999999999985 221 1347899999899
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 301 ~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
+.++++++++.++++.|.+++.+.+||+|
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 112 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLD 112 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEe
Confidence 99999999999999999999999999998
No 39
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.68 E-value=9.4e-17 Score=138.85 Aligned_cols=99 Identities=11% Similarity=0.186 Sum_probs=89.0
Q ss_pred cccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCC--CEEEEEEhhhhhccCCC---CCCccccccccC
Q 013310 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPK--NIIGLLLVKSLLTVRPE---TETPVSAVSIRR 300 (445)
Q Consensus 226 ~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~--~ivGiv~~kDll~~~~~---~~~~v~~im~~~ 300 (445)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ + +++|+++.+|+++.... .+.+++++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 689999985 688999999998 99999999999999999874 5 89999999999875322 246899999899
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 301 ~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
+++++++ ++.++++.|.+++.+.+||+|
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd 108 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVN 108 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEEC
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEc
Confidence 9999999 999999999999999999999
No 40
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.68 E-value=1.3e-17 Score=164.22 Aligned_cols=186 Identities=15% Similarity=0.176 Sum_probs=143.4
Q ss_pred cccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCC-----EEEEEEhhhhhccCC-------CCCCcccc
Q 013310 228 AEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKN-----IIGLLLVKSLLTVRP-------ETETPVSA 295 (445)
Q Consensus 228 V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~-----ivGiv~~kDll~~~~-------~~~~~v~~ 295 (445)
+.++|++ +++++++++++. ++++.|.+++++++||++++ +. ++|+++.+|+++... ....++++
T Consensus 116 ~~~~~~~--~~v~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~ 191 (323)
T 3t4n_C 116 ALGVDQL--DTASIHPSRPLF-EACLKMLESRSGRIPLIDQD-EETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGD 191 (323)
T ss_dssp HTTC------CCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-TTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGG
T ss_pred HhCCCCC--CceEeCCCCcHH-HHHHHHHhCCeeEEEEEecC-CCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHH
Confidence 4455553 688999999998 99999999999999999865 33 999999999986421 12357888
Q ss_pred c---cccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCcccccccccC---
Q 013310 296 V---SIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEK--- 369 (445)
Q Consensus 296 i---m~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~~~--- 369 (445)
+ |.++++++++++++.++++.|.+++.+.+||+|++|+++|+| |.+|+++.+.+..... ...+........
T Consensus 192 ~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Gii--t~~dl~~~~~~~~~~~-~~~~v~~~m~~~~~~ 268 (323)
T 3t4n_C 192 LNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVY--EAYDVLGLIKGGIYND-LSLSVGEALMRRSDD 268 (323)
T ss_dssp TTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE--ETTHHHHHHHTTHHHH-TTSBHHHHGGGSCTT
T ss_pred cCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEE--eHHHHHHHHhhchhhh-ccCCHHHHHhhcccc
Confidence 8 888999999999999999999999999999999999999999 9999998776433111 111211111111
Q ss_pred -CCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHhc
Q 013310 370 -TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (445)
Q Consensus 370 -~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~g 429 (445)
...+.++++.++.+..+.+........-+++ ++|+++|+||.+|+++.+++
T Consensus 269 ~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---------~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 269 FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD---------DVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp CCCCEEECTTCBHHHHHHHHHHSCCCEEEEEC---------TTSBEEEEEEHHHHHHHHHH
T ss_pred CCCCEEECCCCCHHHHHHHHHHhCCCEEEEEC---------CCCcEEEEEEHHHHHHHHHh
Confidence 1567899999999988888765544433444 68999999999999999997
No 41
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.68 E-value=1.4e-16 Score=140.29 Aligned_cols=101 Identities=11% Similarity=0.156 Sum_probs=90.4
Q ss_pred cccccccccC----CceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC-----CCCccccc
Q 013310 226 KTAEEAMTPI----ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVSAV 296 (445)
Q Consensus 226 ~~V~diMtpr----~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~~i 296 (445)
.+|+|+|+|+ ++++++++++++. ++++.|.+++++++||.+ .++++|+++.+|+++.... ...+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999986 6788999999998 999999999999999964 3799999999999875422 34789999
Q ss_pred cccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 297 SIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 297 m~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
|.+++.++++++++.++++.|.+++.+.+||+|
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 116 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD 116 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 989999999999999999999999999999998
No 42
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.67 E-value=4.7e-17 Score=156.75 Aligned_cols=190 Identities=16% Similarity=0.171 Sum_probs=138.1
Q ss_pred ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhc-cCCCC----CCcccccccc
Q 013310 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLT-VRPET----ETPVSAVSIR 299 (445)
Q Consensus 225 ~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~-~~~~~----~~~v~~im~~ 299 (445)
+.+++++|.+ ++.++++++++. ++++.|.+++.+++||++++ ++++|+++.+|+++ ....+ ..+++++|.+
T Consensus 59 ~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~~ 134 (282)
T 2yzq_A 59 EEQLAMLVKR--DVPVVKENDTLK-KAAKLMLEYDYRRVVVVDSK-GKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQR 134 (282)
T ss_dssp -----CCCBS--CCCEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSBS
T ss_pred cCCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHhccCCcccCcHHHHhCC
Confidence 5789999986 477899999998 99999999999999999875 78999999999998 65432 4678899988
Q ss_pred CCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcc------cccc------cC-------CCCCCCCc
Q 013310 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKP------KLNE------AK-------GGDCDLTA 360 (445)
Q Consensus 300 ~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~------~~i~------~~-------~~~~~~~~ 360 (445)
+++++++++++.++++.|.+++.+.+||+|++|.+.|++ |.+|++ +.+. .. .....+..
T Consensus 135 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Gii--t~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (282)
T 2yzq_A 135 YVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIV--DETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFE 212 (282)
T ss_dssp CCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEE--EGGGGGGCGGGCC--------------------------
T ss_pred CCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEE--EHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHh
Confidence 999999999999999999999999999999999999999 999998 3331 00 00000000
Q ss_pred ------ccc-cccccCCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHhc
Q 013310 361 ------PLL-SKQDEKTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (445)
Q Consensus 361 ------~~~-~~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~g 429 (445)
... ...-+......++++.++.+..+.|........-+++ ++|+++|+||..|+++.+..
T Consensus 213 ~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---------~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 213 KFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIR---------GEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp ------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE---------TTTEEEEEEEHHHHGGGGCC
T ss_pred HhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEEC---------CCCCEEEEEeHHHHHHHHHh
Confidence 000 1112233456678888888877776554333222233 45799999999999998763
No 43
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.66 E-value=2.7e-16 Score=139.15 Aligned_cols=102 Identities=18% Similarity=0.218 Sum_probs=90.4
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC----CCCCccccccc
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP----ETETPVSAVSI 298 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~----~~~~~v~~im~ 298 (445)
+.+.+|+++|++ .+++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++... ....+++++|.
T Consensus 14 l~~~~v~~im~~---~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI---PVVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC---CCEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC---CEEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 466899999985 34899999998 99999999999999999865 79999999999987531 13468999988
Q ss_pred c--CCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 299 R--RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 299 ~--~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 121 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIK 121 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEe
Confidence 7 889999999999999999999999999999
No 44
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.65 E-value=3.9e-16 Score=137.63 Aligned_cols=102 Identities=21% Similarity=0.272 Sum_probs=90.3
Q ss_pred cCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcE-EEeEeCCCCCEEEEEEhhhhhccC--------------
Q 013310 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSR-VPVYSGNPKNIIGLLLVKSLLTVR-------------- 286 (445)
Q Consensus 222 ~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~-~PV~~~~~~~ivGiv~~kDll~~~-------------- 286 (445)
.+...+|+++|++ +++++++++++. ++++.|.++++++ +||+|++ +++|+|+.+|+++..
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 3567789999986 688999999998 9999999999999 9999874 899999999998641
Q ss_pred -----CCCCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 287 -----PETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 287 -----~~~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
.....+++++|.+ ++++++++++.++++.|.+++.+.+||+|
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD 133 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc
Confidence 1234678999888 89999999999999999999999999999
No 45
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.64 E-value=2.2e-16 Score=134.88 Aligned_cols=102 Identities=14% Similarity=0.226 Sum_probs=89.0
Q ss_pred cccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhh-ccCCC----CCCccccccc
Q 013310 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLL-TVRPE----TETPVSAVSI 298 (445)
Q Consensus 224 ~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll-~~~~~----~~~~v~~im~ 298 (445)
.-.+|+++|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+++.+|++ +.... ...+++++|.
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 81 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELAR 81 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHT
T ss_pred hhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHhc
Confidence 44689999985 678899999998 99999999999999999764 7999999999998 34322 2467899998
Q ss_pred cCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 299 RRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 299 ~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++++++++++++.++++.|.+++.+.+||+|
T Consensus 82 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 112 (133)
T 1y5h_A 82 DSIYYVDANASIQEMLNVMEEHQVRRVPVIS 112 (133)
T ss_dssp TCCCCEETTCCHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEE
Confidence 9999999999999999999999999999999
No 46
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.64 E-value=3.2e-16 Score=132.15 Aligned_cols=99 Identities=14% Similarity=0.205 Sum_probs=88.0
Q ss_pred cccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC----CCCccccccccCC
Q 013310 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE----TETPVSAVSIRRI 301 (445)
Q Consensus 226 ~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~----~~~~v~~im~~~~ 301 (445)
++|+++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+++.+|+++...+ ...++.++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 368999986 688899999998 999999999999999998 4 899999999999865321 2468899998899
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 302 PRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 302 ~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
.++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 103 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEE 103 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEE
Confidence 9999999999999999999999999999
No 47
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.64 E-value=4.5e-16 Score=141.11 Aligned_cols=101 Identities=23% Similarity=0.258 Sum_probs=90.7
Q ss_pred cccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC-----CCCCccccccccC
Q 013310 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP-----ETETPVSAVSIRR 300 (445)
Q Consensus 226 ~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~-----~~~~~v~~im~~~ 300 (445)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++.... ....+++++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 689999985 688999999998 99999999999999999865 78999999999987543 1346899999889
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEcc
Q 013310 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVKA 330 (445)
Q Consensus 301 ~~~V~~~~~l~~al~~m~~~~~~~a~Vvde 330 (445)
++++++++++.++++.|.+++.+.+||+|+
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 114 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVDD 114 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEECT
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 999999999999999999999999999993
No 48
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.64 E-value=3.9e-16 Score=138.33 Aligned_cols=102 Identities=24% Similarity=0.256 Sum_probs=90.4
Q ss_pred cccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC------------CCCC
Q 013310 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP------------ETET 291 (445)
Q Consensus 224 ~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~------------~~~~ 291 (445)
...+|+++|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999986 678899999998 99999999999999999865 78999999999986421 2346
Q ss_pred ccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 292 ~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++.++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 116 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA 116 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE
Confidence 88999988999999999999999999999999999999
No 49
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.63 E-value=5.1e-16 Score=134.01 Aligned_cols=103 Identities=15% Similarity=0.178 Sum_probs=87.6
Q ss_pred Cccccccc---ccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC-----CCCccc
Q 013310 223 LTEKTAEE---AMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVS 294 (445)
Q Consensus 223 l~~~~V~d---iMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~ 294 (445)
+-+.++++ +|+ ++++++++++++. ++++.|.+++++++||++++ ++++|+++.+|+++.... ...++.
T Consensus 5 ~~~~~v~~~~~~~~--~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 80 (144)
T 2nyc_A 5 FLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVG 80 (144)
T ss_dssp GGGSBGGGSSCCBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBHH
T ss_pred hhhcchhhcCCCCC--CCceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccHH
Confidence 44668888 776 3688999999998 99999999999999999865 799999999999875322 246788
Q ss_pred ccccc------CCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 295 AVSIR------RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 295 ~im~~------~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++|.+ ++.++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 121 (144)
T 2nyc_A 81 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD 121 (144)
T ss_dssp HHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 88865 688999999999999999999999999999
No 50
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.63 E-value=7.9e-17 Score=159.35 Aligned_cols=188 Identities=12% Similarity=0.108 Sum_probs=145.0
Q ss_pred ccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCC----EEEEEEhhhhhccCCC-------CCCcccc--
Q 013310 229 EEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKN----IIGLLLVKSLLTVRPE-------TETPVSA-- 295 (445)
Q Consensus 229 ~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~----ivGiv~~kDll~~~~~-------~~~~v~~-- 295 (445)
+++|.++.+++++++++++. ++++.|.+++++++||++++.++ ++|+++.+|+++.... ...++++
T Consensus 110 ~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~v~~l~ 188 (334)
T 2qrd_G 110 RKIGAIPPETIYVHPMHSLM-DACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKETAMLRVPLNQMT 188 (334)
T ss_dssp HHHTCSCSSCCCBCTTSBHH-HHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGGGGGCCCBGGGSS
T ss_pred HhhccCCCceeeeCCCCcHH-HHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccchhhhhCcHHHhC
Confidence 35677655568999999998 99999999999999999865344 9999999999865321 1356778
Q ss_pred -ccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCcccccccccC----C
Q 013310 296 -VSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEK----T 370 (445)
Q Consensus 296 -im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~~~----~ 370 (445)
+|.+++.++++++++.++++.|.+++.+.+||+|++|++.|+| |.+|+++.+.+..... ...+........ .
T Consensus 189 ~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Gii--t~~dl~~~~~~~~~~~-~~~~v~~~m~~~~~~~~ 265 (334)
T 2qrd_G 189 IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVY--ESVDVMHLIQDGDYSN-LDLSVGEALLKRPANFD 265 (334)
T ss_dssp CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE--ETHHHHHHHTTSCGGG-GGSBHHHHHTTCCTTCC
T ss_pred CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEE--EHHHHHHHhhcccccc-ccCcHHHHHhcccccCC
Confidence 4788999999999999999999999999999999999999999 9999998776533111 111111111111 3
Q ss_pred CceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHhc
Q 013310 371 ESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (445)
Q Consensus 371 ~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~g 429 (445)
..+.++++.++.+..+.|........-+++ ++|+++|+||..|+++.+.+
T Consensus 266 ~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---------~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 266 GVHTCRATDRLDGIFDAIKHSRVHRLFVVD---------ENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp CCCEECTTCBHHHHHHHHHHSCCCEEEEEC---------TTCBEEEEEEHHHHHHHHHS
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEC---------CCCeEEEEEeHHHHHHHHHh
Confidence 567899999999888888765443333334 57999999999999999986
No 51
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.63 E-value=6.3e-16 Score=139.49 Aligned_cols=106 Identities=14% Similarity=0.172 Sum_probs=90.8
Q ss_pred CcccccccccccCCc--eEEe--eCCCCccHHHHHHHHHcCCcEEEeEe-CCCCCEEEEEEhhhhhccCC----------
Q 013310 223 LTEKTAEEAMTPIES--TFSL--DVNSKLDWEAMGKILARGHSRVPVYS-GNPKNIIGLLLVKSLLTVRP---------- 287 (445)
Q Consensus 223 l~~~~V~diMtpr~~--vv~v--~~~~sl~~e~l~~~~~~~~s~~PV~~-~~~~~ivGiv~~kDll~~~~---------- 287 (445)
+.+.+|+++|++..+ ++++ ++++++. ++++.|.+++++++||++ ++.++++|+|+.+|+++...
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 357899999998533 6778 9999998 999999999999999993 23489999999999986421
Q ss_pred ------------------CCCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 288 ------------------ETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 288 ------------------~~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
....++.++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 146 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH 146 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 124678999888999999999999999999999999999998
No 52
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.62 E-value=6.2e-16 Score=136.64 Aligned_cols=109 Identities=14% Similarity=0.159 Sum_probs=90.5
Q ss_pred HHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeC-CCCCEEEEEEhhhhhccCCC--------
Q 013310 218 SGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSG-NPKNIIGLLLVKSLLTVRPE-------- 288 (445)
Q Consensus 218 ~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~-~~~~ivGiv~~kDll~~~~~-------- 288 (445)
.+.+.+.+.+|+++|++ +++++++++++. ++++.|.+++++++||+++ +.++++|+++.+|++.....
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 34556788999999986 688899999998 9999999999999999986 24799999999999865321
Q ss_pred CCCccccccccC------CceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 289 TETPVSAVSIRR------IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 289 ~~~~v~~im~~~------~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
...++.++|..+ +.++++++++.++++.|.+++.+.+||+|
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 128 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS 128 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE
Confidence 124678887665 78899999999999999999999999998
No 53
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.62 E-value=2.9e-16 Score=155.09 Aligned_cols=188 Identities=17% Similarity=0.186 Sum_probs=143.8
Q ss_pred ccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC--C--------CCccccc
Q 013310 227 TAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE--T--------ETPVSAV 296 (445)
Q Consensus 227 ~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~--~--------~~~v~~i 296 (445)
+++++|++ +++++++++++. ++++.|.+++++++||++++.++++|+++.+|+++.... . ..+++++
T Consensus 119 ~~~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~ 195 (330)
T 2v8q_E 119 VYLQDSFK--PLVCISPNASLF-DAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEEL 195 (330)
T ss_dssp HHSSSSCC--CCCCBCTTSBHH-HHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGGGSBHHHH
T ss_pred HHhhcccC--CceEeCCCCCHH-HHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhhcCCHHHh
Confidence 45688975 688999999998 999999999999999998623799999999999875321 1 1234443
Q ss_pred --cc-cCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCccccccc----ccC
Q 013310 297 --SI-RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQ----DEK 369 (445)
Q Consensus 297 --m~-~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~----~~~ 369 (445)
|. ++++++++++++.++++.|.+++.+.+||+|++|.++|+| |.+|+++......... ...+..... ...
T Consensus 196 ~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Gii--t~~dl~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 272 (330)
T 2v8q_E 196 QIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIY--SKFDVINLAAEKTYNN-LDVSVTKALQHRSHYF 272 (330)
T ss_dssp TCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEE--EGGGTGGGGGSSCCCC-CSSBHHHHGGGCCSCC
T ss_pred cccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEE--EHHHHHHHHhcccccc-ccCcHHHHHhcccccc
Confidence 33 7888999999999999999999999999999999999999 9999998876543221 112211111 113
Q ss_pred CCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHhc
Q 013310 370 TESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (445)
Q Consensus 370 ~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~g 429 (445)
...+.++++.++.+..+.+........-+++ ++|+++|+||..|+++.+..
T Consensus 273 ~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd---------~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 273 EGVLKCYLHETLEAIINRLVEAEVHRLVVVD---------EHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp CSCCEECTTSBHHHHHHHHHHHTCSEEEEEC---------TTSBEEEEEEHHHHHHHHHS
T ss_pred CCCeEECCCCcHHHHHHHHHHCCCcEEEEEc---------CCCcEEEEEeHHHHHHHHHh
Confidence 5667889999998888877765443333334 57999999999999999884
No 54
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.61 E-value=1.3e-15 Score=133.54 Aligned_cols=101 Identities=15% Similarity=0.188 Sum_probs=87.9
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC-----CCCcccccc
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVSAVS 297 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~~im 297 (445)
+.+.+|+++ ++++++++++++. ++++.|.+++++.+||++++ ++++|+++.+|+++.... .+.++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 456788888 3678899999998 99999999999999999865 799999999999875322 236788888
Q ss_pred c------cCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 298 I------RRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 298 ~------~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
. ++++++++++++.++++.|.+++.+.+||+|
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVD 131 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC
Confidence 5 7889999999999999999999999999999
No 55
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.59 E-value=4.5e-16 Score=167.42 Aligned_cols=124 Identities=19% Similarity=0.090 Sum_probs=109.3
Q ss_pred cccccccccccCCceEEeeCCCCccHHHHHHHH-HcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCCC------------
Q 013310 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKIL-ARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETE------------ 290 (445)
Q Consensus 224 ~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~-~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~------------ 290 (445)
.+.+|+|+|+|++++++++++++++ |+.+.|. +++++++||+|++ ++++|+|+.+|+++......
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999988999999999998 9999999 7999999999874 79999999999987543210
Q ss_pred ---------------------------------------CccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccC
Q 013310 291 ---------------------------------------TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK 331 (445)
Q Consensus 291 ---------------------------------------~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~ 331 (445)
.+++++|.+++.+|++++++.++++.|++++.+.+||+ |+
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~ 607 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ET
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-EC
Confidence 03778999999999999999999999999999999999 89
Q ss_pred CCccCCCCCCCCCcccccccC
Q 013310 332 GKSKTLPPMTDGKKPKLNEAK 352 (445)
Q Consensus 332 G~~~Giv~~T~~di~~~i~~~ 352 (445)
|+++|+| |.+|+++.+..+
T Consensus 608 G~lvGIV--T~~Dll~~~~~~ 626 (632)
T 3org_A 608 GKLVGIV--EREDVAYGYSNS 626 (632)
T ss_dssp TEEEEEE--EGGGTEECCCC-
T ss_pred CEEEEEE--ehhhHHHHHhhh
Confidence 9999999 999999887644
No 56
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.58 E-value=1.2e-14 Score=135.29 Aligned_cols=117 Identities=11% Similarity=0.001 Sum_probs=102.3
Q ss_pred cccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCCceeC
Q 013310 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVP 305 (445)
Q Consensus 226 ~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~~~V~ 305 (445)
-+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+++.+|+.+... +.+++++|.+++++++
T Consensus 13 ~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~v~ 86 (213)
T 1vr9_A 13 MKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFFVH 86 (213)
T ss_dssp CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCCEE
T ss_pred cCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEEEC
Confidence 578999985 688999999998 99999999999999999864 78999999999987654 4689999999999999
Q ss_pred CCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccc
Q 013310 306 SDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNE 350 (445)
Q Consensus 306 ~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~ 350 (445)
+++++.++++.|.+++.+.+||+|++|+++|+| |.+|+++.+.
T Consensus 87 ~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGii--t~~Dil~~~~ 129 (213)
T 1vr9_A 87 EEDNITHALLLFLEHQEPYLPVVDEEMRLKGAV--SLHDFLEALI 129 (213)
T ss_dssp TTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEE--EHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEE--EHHHHHHHHH
Confidence 999999999999999999999999767777777 6666666554
No 57
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.56 E-value=1.4e-14 Score=151.30 Aligned_cols=150 Identities=15% Similarity=0.185 Sum_probs=118.9
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCC-----HHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCC
Q 013310 186 LFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGH 260 (445)
Q Consensus 186 ~~s~eEl~~li~~~~~e~~~~g~l~-----~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~ 260 (445)
.+|++|+...+.. ....|.+. +++++++.++++ ++++|++ +++++++++++. ++++.|.++++
T Consensus 54 ~vt~~eLa~av~~----~Gg~G~i~~~~~~e~~~~~i~~v~~-----~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIAR----AGGLGVIHKNMSITEQAEEVRKVKR-----SENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECCSSCHHHHHHHHHHHHH-----HTTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHH----cCCceEEeCCCCHHHHHHHHHHHhh-----HHhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 4677899988863 22233444 677888888765 4789986 688899999998 99999999999
Q ss_pred cEEEeEeC-CCCCEEEEEEhhhhhccCCCCCCcccccccc-CCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCC
Q 013310 261 SRVPVYSG-NPKNIIGLLLVKSLLTVRPETETPVSAVSIR-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLP 338 (445)
Q Consensus 261 s~~PV~~~-~~~~ivGiv~~kDll~~~~~~~~~v~~im~~-~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv 338 (445)
+++||+++ +.++++|+|+.+|++... ..+.+++++|.+ +++++++++++.++++.|++++.+.+||+|++|+++|++
T Consensus 122 ~~~pVvd~~~~~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGiv 200 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLI 200 (491)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEE
T ss_pred CEEEEEEeCCCCEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEE
Confidence 99999982 348999999999998653 345789999887 899999999999999999999999999999555555555
Q ss_pred CCCCCCcccccc
Q 013310 339 PMTDGKKPKLNE 350 (445)
Q Consensus 339 ~~T~~di~~~i~ 350 (445)
|.+|+++.+.
T Consensus 201 --t~~Dil~~~~ 210 (491)
T 1zfj_A 201 --TIKDIEKVIE 210 (491)
T ss_dssp --EHHHHHHHHH
T ss_pred --EHHHHHHHHh
Confidence 4444444443
No 58
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.55 E-value=1.7e-15 Score=158.01 Aligned_cols=150 Identities=16% Similarity=0.217 Sum_probs=113.5
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCC-----CHHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcC
Q 013310 185 ALFRRAQLKALVTIHSQEAGKGGEL-----THDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARG 259 (445)
Q Consensus 185 ~~~s~eEl~~li~~~~~e~~~~g~l-----~~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~ 259 (445)
..+|++++...+... ..-|.+ .+++++++.++ ++++++|++ +++++++++++. ++++.|.+++
T Consensus 52 dtVTe~~ma~a~a~~----GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQE----GGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHH----TCEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHc----CCcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 457888888777532 122334 56778888888 567889984 788999999998 9999999999
Q ss_pred CcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccc-c-CCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCC
Q 013310 260 HSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSI-R-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTL 337 (445)
Q Consensus 260 ~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~-~-~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Gi 337 (445)
++++||++++ ++++|+|+.+|+... ...+.+++++|. + +++++++++++.++++.|++++.+.+||+|++|.++|+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rDL~~~-~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~Gi 197 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRDVRFV-TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGM 197 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHHHTTC-CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEE
T ss_pred CcEEEEEccC-CEEEEEEEHHHHhhc-ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEe
Confidence 9999999975 899999999999743 234578999987 4 58999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccc
Q 013310 338 PPMTDGKKPKLNE 350 (445)
Q Consensus 338 v~~T~~di~~~i~ 350 (445)
| |.+|+++...
T Consensus 198 I--T~~DIl~~~~ 208 (496)
T 4fxs_A 198 I--TAKDFHKAES 208 (496)
T ss_dssp E--CCC-----CC
T ss_pred e--hHhHHHHhhc
Confidence 9 9999998654
No 59
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.54 E-value=2.1e-14 Score=150.27 Aligned_cols=149 Identities=15% Similarity=0.185 Sum_probs=116.9
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCC-----HHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCC
Q 013310 186 LFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGH 260 (445)
Q Consensus 186 ~~s~eEl~~li~~~~~e~~~~g~l~-----~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~ 260 (445)
..|++++...+.... .-|.+. +++.+++.++. +.++.|++ +++++++++++. ++++.|.++++
T Consensus 77 tvTe~~lAia~a~~G----giGvIh~~~~~~~q~~~V~~V~-----~~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~~ 144 (511)
T 3usb_A 77 TVTEADMAIAMARQG----GLGIIHKNMSIEQQAEQVDKVK-----RSESGVIS--DPFFLTPEHQVY-DAEHLMGKYRI 144 (511)
T ss_dssp TTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHHH-----TSSSCSSS--SCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred hhcHHHHHHHHHhcC----CceeecccCCHHHHHHHHHHhh-----cccccccc--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 467888876665221 123332 34555677774 35567764 688999999998 99999999999
Q ss_pred cEEEeEeC--CCCCEEEEEEhhhhhccCCCCCCcccccccc-CCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCC
Q 013310 261 SRVPVYSG--NPKNIIGLLLVKSLLTVRPETETPVSAVSIR-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTL 337 (445)
Q Consensus 261 s~~PV~~~--~~~~ivGiv~~kDll~~~~~~~~~v~~im~~-~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Gi 337 (445)
+++||+++ + ++++|+|+.+|++.. ...+.+++++|.+ +++++++++++.++++.|++++.+.+||+|++|.++|+
T Consensus 145 s~~pVvd~g~~-~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~Gi 222 (511)
T 3usb_A 145 SGVPVVNNLDE-RKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGL 222 (511)
T ss_dssp SEEEEESCTTT-CBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred cEEEEEecCCC-CEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeee
Confidence 99999986 4 899999999999763 3345789999987 89999999999999999999999999999976666666
Q ss_pred CCCCCCCcccccc
Q 013310 338 PPMTDGKKPKLNE 350 (445)
Q Consensus 338 v~~T~~di~~~i~ 350 (445)
| |.+|+++.+.
T Consensus 223 I--T~~Dil~~~~ 233 (511)
T 3usb_A 223 I--TIKDIEKVIE 233 (511)
T ss_dssp E--EHHHHHHHHH
T ss_pred c--cHHHHHHhhh
Confidence 6 6666665554
No 60
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.53 E-value=1e-14 Score=138.20 Aligned_cols=102 Identities=17% Similarity=0.220 Sum_probs=88.7
Q ss_pred ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC----------------
Q 013310 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE---------------- 288 (445)
Q Consensus 225 ~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~---------------- 288 (445)
..+|+|+|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+++.+|+++....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999985 688999999998 99999999999999999875 799999999999764210
Q ss_pred --------------------------------------------------------------------------------
Q 013310 289 -------------------------------------------------------------------------------- 288 (445)
Q Consensus 289 -------------------------------------------------------------------------------- 288 (445)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------CCCccccccc-cCCceeCCCCCHHHHHHHHhhCCCeEEEEEcc
Q 013310 289 ---------------------TETPVSAVSI-RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA 330 (445)
Q Consensus 289 ---------------------~~~~v~~im~-~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde 330 (445)
...+++++|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~ 225 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDE 225 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECT
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcC
Confidence 0235778888 89999999999999999999999999999994
No 61
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.50 E-value=3.7e-14 Score=135.24 Aligned_cols=60 Identities=8% Similarity=0.077 Sum_probs=53.2
Q ss_pred cCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCC-CCCEEEEEEhhhhhc
Q 013310 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGN-PKNIIGLLLVKSLLT 284 (445)
Q Consensus 222 ~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~-~~~ivGiv~~kDll~ 284 (445)
...+.+|+|+|++ +++++.+++++. ++.+.|.+++++++||++++ .++++|+|+.+||++
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 3567899999985 789999999998 99999999999999999864 257999999999975
No 62
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.50 E-value=3.9e-14 Score=149.28 Aligned_cols=102 Identities=13% Similarity=0.165 Sum_probs=88.8
Q ss_pred CcccccccccccCCceEEeeCC-CCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC----CCCCcccccc
Q 013310 223 LTEKTAEEAMTPIESTFSLDVN-SKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP----ETETPVSAVS 297 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~-~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~----~~~~~v~~im 297 (445)
+.+.+|+++|++ ++++++++ +++. ++++.|.+++++++||+|++.++++|+|+.+|+++... ..+.+++++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 567899999985 68899999 9998 99999999999999999833489999999999986432 2347899999
Q ss_pred ccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 298 IRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 298 ~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
.+++++|++++++.++++.|.+++ ++||+|
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd 487 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILG 487 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEE
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEe
Confidence 999999999999999999997765 479998
No 63
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.47 E-value=8.9e-15 Score=153.16 Aligned_cols=158 Identities=9% Similarity=0.066 Sum_probs=20.2
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCC-HHHHHHHHHhhcCcccccccc-cccCCceEEeeCCCCccHHHHHHHHHcCCcEE
Q 013310 186 LFRRAQLKALVTIHSQEAGKGGELT-HDETTIISGALDLTEKTAEEA-MTPIESTFSLDVNSKLDWEAMGKILARGHSRV 263 (445)
Q Consensus 186 ~~s~eEl~~li~~~~~e~~~~g~l~-~~E~~~l~~~~~l~~~~V~di-Mtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~ 263 (445)
..+++++...+......+.-...++ +++++++.++. ..++ |++ +++++++++++. ++++.|.+++++++
T Consensus 61 ~vt~~~la~~la~~gg~G~I~~~~~~e~~~~~v~~V~------~~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~~s~~ 131 (503)
T 1me8_A 61 SVSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVK------NFKAGFVV--SDSNVKPDQTFA-DVLAISQRTTHNTV 131 (503)
T ss_dssp TTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHH------TTTC---------------------------------
T ss_pred hhhHHHHHHHHHhCCCcceeeCCCCHHHHHHHHhhhh------hcccCccc--CCeEECCCCcHH-HHHHHHHHcCceEE
Confidence 4567888777752110000001122 45667776554 3455 986 788999999999 99999999999999
Q ss_pred EeEeCC--CCCEEEEEEhhhhhccCCCCCCccccccccC--CceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCC
Q 013310 264 PVYSGN--PKNIIGLLLVKSLLTVRPETETPVSAVSIRR--IPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPP 339 (445)
Q Consensus 264 PV~~~~--~~~ivGiv~~kDll~~~~~~~~~v~~im~~~--~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~ 339 (445)
||++++ .++++|+|+.+|++......+.+++++|.++ ++++++++++.++++.|++++.+.+||+|++|+++|+|
T Consensus 132 pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiI- 210 (503)
T 1me8_A 132 AVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIV- 210 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEE-
Confidence 999864 3789999999999863222347899998876 99999999999999999999999999999999999999
Q ss_pred CCCCCcccccccCCC
Q 013310 340 MTDGKKPKLNEAKGG 354 (445)
Q Consensus 340 ~T~~di~~~i~~~~~ 354 (445)
|.+|+++.+.....
T Consensus 211 -T~~Dil~~~~~~~~ 224 (503)
T 1me8_A 211 -FRKDYDRSQVCHNE 224 (503)
T ss_dssp ------------CCC
T ss_pred -EecHHHHhhhcccc
Confidence 99999998875543
No 64
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.43 E-value=1.8e-14 Score=150.33 Aligned_cols=146 Identities=13% Similarity=0.196 Sum_probs=22.9
Q ss_pred cccHHHHHHHHHHhhhhhccCCCCC-----HHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCC
Q 013310 186 LFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGH 260 (445)
Q Consensus 186 ~~s~eEl~~li~~~~~e~~~~g~l~-----~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~ 260 (445)
..+++|+...+.. ....|.+. +++++++.+++++. ++|++ +++++++++++. ++++.|.++++
T Consensus 57 ~vt~~ela~ava~----~GglG~i~~~~~~e~~~~~I~~v~~~~-----~~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMAR----EGGLGVIHRNMGIEEQVEQVKRVKRAE-----RLIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHh----cCCceeecCCCCHHHHHHHHHhhcchh-----hcccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 4667888877752 21223343 57788999998764 46874 788999999998 99999999999
Q ss_pred cEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCC
Q 013310 261 SRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPM 340 (445)
Q Consensus 261 s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~ 340 (445)
+++||+++ ++++|+|+.+|++. +.+.+++++|.++++++++++++.++++.|++++.+.+||+|++|+++|++
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGii-- 197 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLI-- 197 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEE--
Confidence 99999986 79999999999986 345789999988899999999999999999999999999999999999999
Q ss_pred CCCCcccccc
Q 013310 341 TDGKKPKLNE 350 (445)
Q Consensus 341 T~~di~~~i~ 350 (445)
|.+|+++...
T Consensus 198 T~~Dil~~~~ 207 (486)
T 2cu0_A 198 TMSDLVARKK 207 (486)
T ss_dssp ---------C
T ss_pred EHHHHHHhhh
Confidence 9999998864
No 65
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.43 E-value=1.7e-14 Score=150.32 Aligned_cols=149 Identities=16% Similarity=0.203 Sum_probs=22.5
Q ss_pred ccccHHHHHHHHHHhhhhhccCCCCC-----HHHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcC
Q 013310 185 ALFRRAQLKALVTIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARG 259 (445)
Q Consensus 185 ~~~s~eEl~~li~~~~~e~~~~g~l~-----~~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~ 259 (445)
..+|++++...+.... .-|.+. +++++++.++ ++++++|++ +++++++++++. ++++.|.+++
T Consensus 51 ~tVTe~~lA~ala~~G----GiGvI~~~~~~e~~a~~v~~v-----k~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~ 118 (490)
T 4avf_A 51 DTVTEARLAIAMAQEG----GIGIIHKNMGIEQQAAEVRKV-----KKHETAIVR--DPVTVTPSTKII-ELLQMAREYG 118 (490)
T ss_dssp TTTCSHHHHHHHHHHT----SEEEECCSSCHHHHHHHHHHH-----HHCCC-----------------------------
T ss_pred hhhCHHHHHHHHHHcC----CCccccCCCCHHHHHHHhhhh-----cccccCccc--CceEeCCCCcHH-HHHHHHHHhC
Confidence 3467888887775321 123333 5567777776 557889984 688999999999 9999999999
Q ss_pred CcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccc-c-CCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCC
Q 013310 260 HSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSI-R-RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTL 337 (445)
Q Consensus 260 ~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~-~-~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Gi 337 (445)
++++||++ + ++++|+|+.+|+... ...+.+++++|. + +++++++++++.++++.|++++.+.+||+|++|+++|+
T Consensus 119 ~s~~pVvd-~-g~lvGIVt~rDl~~~-~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGi 195 (490)
T 4avf_A 119 FSGFPVVE-Q-GELVGIVTGRDLRVK-PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGL 195 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEE-C-CEEEEEEEhHHhhhc-cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEE
Confidence 99999998 3 799999999999643 234578999987 4 68999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccc
Q 013310 338 PPMTDGKKPKLNE 350 (445)
Q Consensus 338 v~~T~~di~~~i~ 350 (445)
| |.+|+++...
T Consensus 196 I--T~~Dil~~~~ 206 (490)
T 4avf_A 196 V--TFRDIEKAKT 206 (490)
T ss_dssp -------------
T ss_pred E--ehHHhhhhcc
Confidence 9 9999998754
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.27 E-value=6.9e-13 Score=138.67 Aligned_cols=133 Identities=15% Similarity=0.161 Sum_probs=13.8
Q ss_pred CCHH-HHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC
Q 013310 209 LTHD-ETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (445)
Q Consensus 209 l~~~-E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~ 287 (445)
++.+ .++.+..+. +++++|++ +++++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|+++. .
T Consensus 82 ~~~e~~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~-~ 151 (494)
T 1vrd_A 82 LTPDEQARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFE-K 151 (494)
T ss_dssp SCHHHHHHHHHHHH-----TC-----------------------------------------------------------
T ss_pred CChHHHHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhh-c
Confidence 3443 344455553 46789985 688999999999 99999999999999999865 789999999999863 2
Q ss_pred CCCCcccccccc--CCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCC
Q 013310 288 ETETPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKG 353 (445)
Q Consensus 288 ~~~~~v~~im~~--~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~ 353 (445)
..+.+++++|.+ +++++++++++.++++.|.+++.+.+||+|++|.++|+| |.+|+++.+....
T Consensus 152 ~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiI--t~~Dll~~~~~~~ 217 (494)
T 1vrd_A 152 NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLI--TIKDIMSVIEHPN 217 (494)
T ss_dssp -----------------------------------------------------------CHHHHTCTT
T ss_pred CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEE--EHHHHHhhhcccc
Confidence 334789999987 899999999999999999999999999999999999999 9999999887654
No 67
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.17 E-value=3.2e-12 Score=134.20 Aligned_cols=121 Identities=12% Similarity=0.203 Sum_probs=72.5
Q ss_pred cccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCC--CCCEEEEEEhhhhhccCC-CCCCcccccccc--C
Q 013310 226 KTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGN--PKNIIGLLLVKSLLTVRP-ETETPVSAVSIR--R 300 (445)
Q Consensus 226 ~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~--~~~ivGiv~~kDll~~~~-~~~~~v~~im~~--~ 300 (445)
.+++++|++ +++++++++++. ++++.|.+++++.+||+|++ .++++|+|+.+|+..... ....+++++|.+ +
T Consensus 108 ~~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~ 184 (514)
T 1jcn_A 108 KNFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIE 184 (514)
T ss_dssp HTCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBC
T ss_pred hhhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCC
Confidence 368899985 577899999999 99999999999999999863 378999999999976421 234689999987 8
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCccccccc
Q 013310 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEA 351 (445)
Q Consensus 301 ~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~ 351 (445)
++++++++++.++++.|.+++.+.+||||++|+++|+| |.+|+++.+..
T Consensus 185 ~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiI--t~~Dll~~~~~ 233 (514)
T 1jcn_A 185 LVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAII--ARTDLKKNRDY 233 (514)
T ss_dssp CCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC------CCCCSSCCCC
T ss_pred CeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEE--EHHHHHHHhhC
Confidence 99999999999999999999999999999999999999 99999987753
No 68
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.17 E-value=3.7e-12 Score=130.85 Aligned_cols=127 Identities=13% Similarity=0.227 Sum_probs=7.4
Q ss_pred HHHHHHHHhhcCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCC--CCCEEEEEEhhhhhccCCCC
Q 013310 212 DETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGN--PKNIIGLLLVKSLLTVRPET 289 (445)
Q Consensus 212 ~E~~~l~~~~~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~--~~~ivGiv~~kDll~~~~~~ 289 (445)
++.++++.+-++ +..|. ++++++.++.++. ++++.+.+++++.+||+++. .++++|||+.+|+... +.
T Consensus 129 ~Qa~~V~~VKr~-----e~g~i--~dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d~ 198 (556)
T 4af0_A 129 EQAAMVRRVKKY-----ENGFI--TDPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--DA 198 (556)
T ss_dssp HHHHHHHHHHHC-----CC-------------------------------------------------------------
T ss_pred HHHHHHHHHHhc-----ccCcc--CCCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--cc
Confidence 445666666333 34565 3678999999999 99999999999999999852 3689999999998653 34
Q ss_pred CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccc
Q 013310 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNE 350 (445)
Q Consensus 290 ~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~ 350 (445)
+.+|+++|+.++++++++.++.+|.+.|++++...+||||+.|.++|+| |.+|+.+...
T Consensus 199 ~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlI--T~kDi~k~~~ 257 (556)
T 4af0_A 199 ETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLV--ARSDLLKNQN 257 (556)
T ss_dssp -------------------------------------------------------------
T ss_pred ceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEE--Eechhhhhhh
Confidence 5789999999999999999999999999999999999999999999999 9999986553
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.77 E-value=1.1e-08 Score=77.73 Aligned_cols=65 Identities=12% Similarity=0.239 Sum_probs=55.0
Q ss_pred ceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC-C----CCCccccccccCCcee
Q 013310 237 STFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP-E----TETPVSAVSIRRIPRV 304 (445)
Q Consensus 237 ~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~-~----~~~~v~~im~~~~~~V 304 (445)
+++++++++++. ++++.|.+++++++||+++ ++++|+++.+|+++... . .+.+++++|.+++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 367899999998 9999999999999999985 78999999999976432 1 2368999999988764
No 70
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.64 E-value=2.6e-09 Score=114.80 Aligned_cols=128 Identities=15% Similarity=0.040 Sum_probs=96.2
Q ss_pred CCCccccccc--cCCceeCCCCCHHHHHHHHh-hCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCC------
Q 013310 289 TETPVSAVSI--RRIPRVPSDMPLYDILNEFQ-KGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLT------ 359 (445)
Q Consensus 289 ~~~~v~~im~--~~~~~V~~~~~l~~al~~m~-~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~------ 359 (445)
.+.+++|+|. +++.++++++++.|+.+.|. +++.+..||+|++|+++|+| |++|+.+.+.....+.+..
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiV--t~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAI--SRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEE--SHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEE--EHHHHHHHHHHHhhhcccccccccc
Confidence 3478999998 88999999999999999999 79999999999999999999 9999988765432110000
Q ss_pred -------------------c-----------------ccc-cccccCCCceEeeccCCCccccccccCCCCCC-CCCccc
Q 013310 360 -------------------A-----------------PLL-SKQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNG 401 (445)
Q Consensus 360 -------------------~-----------------~~~-~~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~-~~tl~g 401 (445)
. |.. ....+..+.+.++++.++.+..+.+..+..+. ..+
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv--- 605 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT--- 605 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE---
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE---
Confidence 0 000 01123445677999999999998888766554 333
Q ss_pred cccccCCCCCCceEEEeehhhHHHHHhc
Q 013310 402 LIYASEDIEDGEVIGIITLEDVFEELLQ 429 (445)
Q Consensus 402 ~~~~~~~~e~g~l~GIVT~~Dile~l~g 429 (445)
|+|+++||||.+|+++++..
T Consensus 606 --------e~G~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 606 --------ERGKLVGIVEREDVAYGYSN 625 (632)
T ss_dssp --------ETTEEEEEEEGGGTEECCCC
T ss_pred --------ECCEEEEEEehhhHHHHHhh
Confidence 48999999999999887653
No 71
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.53 E-value=1.3e-07 Score=70.74 Aligned_cols=64 Identities=13% Similarity=0.236 Sum_probs=54.2
Q ss_pred eEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCC-----CCCccccccccCCcee
Q 013310 238 TFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPE-----TETPVSAVSIRRIPRV 304 (445)
Q Consensus 238 vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~~im~~~~~~V 304 (445)
++++++++++. ++++.|.+++++++||+++ ++++|+++.+|+++.... .+.+++++|.++++++
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 56899999998 9999999999999999986 799999999999886432 2467899988777653
No 72
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.51 E-value=1.2e-08 Score=94.34 Aligned_cols=103 Identities=12% Similarity=0.180 Sum_probs=52.8
Q ss_pred ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCCc-e
Q 013310 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIP-R 303 (445)
Q Consensus 225 ~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~~-~ 303 (445)
+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+++.+|+++..... ....+.+.+-.+ .
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~ 145 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDEE-MRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLL 145 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECTT-CBEEEEEEHHHHHHHHHHS-CC------------
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEe
Confidence 3469999986 678899999998 99999999999999999865 7999999999998754321 122233322111 1
Q ss_pred eCCCCCHHHHHHHHhhCCCeEEEEEccCC
Q 013310 304 VPSDMPLYDILNEFQKGSSHMAAVVKAKG 332 (445)
Q Consensus 304 V~~~~~l~~al~~m~~~~~~~a~Vvde~G 332 (445)
.....++.++.+.|.+++.+.++|++.+|
T Consensus 146 ~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 146 EDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp -----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 23445699999999999999999986443
No 73
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.46 E-value=6.4e-08 Score=100.80 Aligned_cols=118 Identities=14% Similarity=0.055 Sum_probs=80.8
Q ss_pred ccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCcccccccccCCC
Q 013310 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTE 371 (445)
Q Consensus 292 ~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~~~~~ 371 (445)
.++++|..+++++++++++.++++.|.+++.+.+||+|+.|+++|+| |.+|+.... +...+....+.....
T Consensus 90 ~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiV--t~rDL~~~~-------~~~~~v~diM~p~~~ 160 (496)
T 4fxs_A 90 IFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGII--TGRDVRFVT-------DLTKSVAAVMTPKER 160 (496)
T ss_dssp HCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEE--EHHHHTTCC-------CTTSBGGGTSEEGGG
T ss_pred ccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEE--EHHHHhhcc-------cCCCcHHHHhcCCCC
Confidence 45677889999999999999999999999999999999999999999 999986211 111111111111124
Q ss_pred ceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHH
Q 013310 372 SVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEEL 427 (445)
Q Consensus 372 ~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l 427 (445)
.+.++++.++.+..+.|.....+..-+++ ++|+++|+||.+|+++..
T Consensus 161 ~vtv~~~~~l~ea~~~m~~~~i~~lpVVD---------e~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 161 LATVKEGATGAEVQEKMHKARVEKILVVN---------DEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp CCEEECC----CGGGTCC---CCCEEEEC---------TTSBCCEEECCC-----C
T ss_pred CEEECCCCCHHHHHHHHHHcCCCEEEEEc---------CCCCEEEeehHhHHHHhh
Confidence 67899999999999999887776666667 899999999999999874
No 74
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.38 E-value=4.1e-08 Score=102.55 Aligned_cols=116 Identities=16% Similarity=0.062 Sum_probs=0.0
Q ss_pred cccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccC---CCccCCCCCCCCCcccccccCCCCCCCCcccccccccCCCce
Q 013310 297 SIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK---GKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTESV 373 (445)
Q Consensus 297 m~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~---G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 373 (445)
|.++++++++++++.++++.|.+++.+.+||+|+. |+++|+| |.+|+... ......+....+......+
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiV--t~~Dl~~~------~~~~~~~V~diM~~~~~~~ 174 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLV--TQRDYPID------LTQTETKVSDMMTPFSKLV 174 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEE--EHHHHHhh------hccccCcHHHHhCCCCCCE
Confidence 88899999999999999999999999999999987 9999999 99999853 0111112112222223367
Q ss_pred EeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHhc
Q 013310 374 VVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (445)
Q Consensus 374 ~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~g 429 (445)
.++++.++.+..+.|........-+++ ++|+++||||.+||++.+.+
T Consensus 175 tv~~~~sl~ea~~~m~~~~i~~lpVVD---------e~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 175 TAHQDTKLSEANKIIWEKKLNALPIID---------DDQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp --------------------------------------------------------
T ss_pred EEcCCCcHHHHHHHHHHcCCCEEEEEc---------CCCeEEEEEEecHHHHhhhc
Confidence 889999999999988877666655666 78999999999999999875
No 75
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.36 E-value=3.9e-07 Score=80.71 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=38.8
Q ss_pred CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEcc
Q 013310 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA 330 (445)
Q Consensus 290 ~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde 330 (445)
+.+|+++|.++++++++++++.+|++.|.+++.+.+||+|+
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~ 57 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ 57 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC
Confidence 46899999999999999999999999999999999999994
No 76
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.30 E-value=9.3e-08 Score=99.73 Aligned_cols=120 Identities=15% Similarity=0.152 Sum_probs=7.1
Q ss_pred ccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCcccccccccCCC
Q 013310 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTE 371 (445)
Q Consensus 292 ~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~~~~~ 371 (445)
.++++|.++++++++++++.++++.|.+++.+.+||+|+.|+++|+| |.+|+.... +...+....+.....
T Consensus 96 ~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGiv--t~~Dl~~~~-------~~~~~v~~im~~~~~ 166 (494)
T 1vrd_A 96 KTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLL--TNRDVRFEK-------NLSKKIKDLMTPREK 166 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEE--EHHHHHhhc-------CCCCcHHHHhCCCCC
Confidence 35678888999999999999999999999999999999999999999 999998521 111111111111124
Q ss_pred ceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHhc
Q 013310 372 SVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELLQ 429 (445)
Q Consensus 372 ~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~g 429 (445)
...++.+.++.+..+.+........-+++ ++|+++|+||..|+++.+..
T Consensus 167 ~~~v~~~~~l~ea~~~m~~~~~~~lpVVd---------~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 167 LIVAPPDISLEKAKEILHQHRIEKLPLVS---------KDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp ---------------------------------------------------CHHHHTC
T ss_pred CeEECCCCCHHHHHHHHHHcCCcEEEEEc---------CCCeEEEEEEHHHHHhhhcc
Confidence 56778888888888887765444444445 68999999999999999875
No 77
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.23 E-value=1.5e-06 Score=65.64 Aligned_cols=29 Identities=10% Similarity=0.082 Sum_probs=27.6
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 301 IPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 301 ~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++++++++++.+|++.|.+++++.+||+|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d 30 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 56899999999999999999999999998
No 78
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.23 E-value=1.5e-07 Score=98.02 Aligned_cols=118 Identities=13% Similarity=0.083 Sum_probs=2.6
Q ss_pred ccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCcccccccccCCC
Q 013310 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTE 371 (445)
Q Consensus 292 ~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~~~~~ 371 (445)
.++++|..+++++++++++.++++.|.+++.+.+||+| .|+++|+| |.+|+..... ...+....+.....
T Consensus 89 ~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIV--t~rDl~~~~~-------~~~~V~~vMtp~~~ 158 (490)
T 4avf_A 89 KHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIV--TGRDLRVKPN-------AGDTVAAIMTPKDK 158 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEE--EhHHhhhccc-------cCCcHHHHhccCCC
Confidence 46778888999999999999999999999999999999 89999999 9999853211 11111111110124
Q ss_pred ceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHh
Q 013310 372 SVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (445)
Q Consensus 372 ~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~ 428 (445)
.+.++++.++.+..+.|.....+..-+++ ++|+++|+||.+|+++..-
T Consensus 159 ~vtv~~~~~l~ea~~~m~~~~i~~lpVVD---------e~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 159 LVTAREGTPLEEMKAKLYENRIEKMLVVD---------ENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ---------------------------------------------------------
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEc---------CCCcEEEEEehHHhhhhcc
Confidence 67788899999999988877666655666 8999999999999999853
No 79
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.07 E-value=5.2e-06 Score=73.63 Aligned_cols=56 Identities=11% Similarity=0.105 Sum_probs=45.0
Q ss_pred Cccccccc--cCCceeCCCCCHHHHHHHHhhCCCeEEEEEccC-CCccCCCCCCCCCcccc
Q 013310 291 TPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKL 348 (445)
Q Consensus 291 ~~v~~im~--~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~-G~~~Giv~~T~~di~~~ 348 (445)
.+++++|. ++++++++++++.++++.|.+++.+.+||+|+. |+++|+| |.+|+++.
T Consensus 42 ~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGiv--t~~dl~~~ 100 (172)
T 3lhh_A 42 RTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGII--SAKQLLSE 100 (172)
T ss_dssp -CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEE--EHHHHHHH
T ss_pred CCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEE--EHHHHHHH
Confidence 67889998 788999999999999999999999999999954 5555555 55555443
No 80
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.05 E-value=7.3e-06 Score=76.86 Aligned_cols=40 Identities=13% Similarity=0.190 Sum_probs=37.9
Q ss_pred CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 290 ~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd 45 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVAD 45 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEEC
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 3679999999999999999999999999999999999999
No 81
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.04 E-value=4.5e-07 Score=94.99 Aligned_cols=121 Identities=17% Similarity=0.061 Sum_probs=62.6
Q ss_pred ccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEcc---CCCccCCCCCCCCCcccccccCCCCCCCCccccccccc
Q 013310 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA---KGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDE 368 (445)
Q Consensus 292 ~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde---~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~~ 368 (445)
.++++|.++++++++++++.++++.|.+++.+.+||+|+ .|+++|+| |.+|+..... .....+....+..
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiV--t~~Dl~~~~~-----~~~~~~v~~vm~~ 181 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIV--TSRDIDFLAE-----KDHTTLLSEVMTP 181 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC--------CCEE--CTTTTC---------------------C
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEE--EHHHHHhhhh-----ccCCCCHHHHhCC
Confidence 466888889999999999999999999999999999998 59999999 9999975310 0111111111111
Q ss_pred CCCceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHh
Q 013310 369 KTESVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (445)
Q Consensus 369 ~~~~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~ 428 (445)
......++.+.++.+....+.....+..-+++ ++|+++|+||..|+++.+.
T Consensus 182 ~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd---------~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 182 RIELVVAPAGVTLKEANEILQRSKKGKLPIVN---------DCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp CBCCCCEETTCCSTTTTTHHHHHTCSCCCEES---------SSSCCC----CCCCSSCCC
T ss_pred CCCCeEECCCCCHHHHHHHHHHcCCCcccEEC---------CCCeEEEEEEHHHHHHHhh
Confidence 12556788889998888887765544444455 6899999999999998764
No 82
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.02 E-value=4.2e-06 Score=72.67 Aligned_cols=60 Identities=22% Similarity=0.306 Sum_probs=53.4
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~ 287 (445)
..+.+|+++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+|+.+|+++...
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~ 134 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVI 134 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHH
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 357899999986 578899999998 999999999999999998 3 79999999999988643
No 83
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.01 E-value=4.8e-06 Score=68.80 Aligned_cols=56 Identities=14% Similarity=0.083 Sum_probs=47.1
Q ss_pred ccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCccccc
Q 013310 292 PVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLN 349 (445)
Q Consensus 292 ~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i 349 (445)
+++++|.++++++++++++.++++.|.+++.+.+||+|+.|.+.|++ |.+|+.+.+
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~v--t~~dl~~~~ 57 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGII--TSWDIAKAL 57 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEE--CHHHHHHHH
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEE--EHHHHHHHH
Confidence 57789999999999999999999999999999999999766666666 666665443
No 84
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.00 E-value=9.8e-06 Score=69.63 Aligned_cols=57 Identities=7% Similarity=-0.013 Sum_probs=46.4
Q ss_pred CCcccccccc--CCceeCCCCCHHHHHHHHhhCCCeEEEEEccC-CCccCCCCCCCCCcccc
Q 013310 290 ETPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKL 348 (445)
Q Consensus 290 ~~~v~~im~~--~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~-G~~~Giv~~T~~di~~~ 348 (445)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|+. |+++|+| |.+|+++.
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGiv--t~~dl~~~ 81 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFV--HIRDLYNQ 81 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEE--EHHHHHHH
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEE--EHHHHHHH
Confidence 4689999987 89999999999999999999999999999954 5555555 55555443
No 85
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.98 E-value=6.9e-06 Score=71.63 Aligned_cols=63 Identities=13% Similarity=0.202 Sum_probs=55.5
Q ss_pred cCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCC---CEEEEEEhhhhhccC
Q 013310 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPK---NIIGLLLVKSLLTVR 286 (445)
Q Consensus 222 ~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~---~ivGiv~~kDll~~~ 286 (445)
...+.+|+++|+++.+++++++++++. ++++.|.+++++++||++++ + +++|+|+.+|+++..
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~~dil~~l 142 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTKTNMTKIL 142 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEHHHHHHHH
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEHHHHHHHH
Confidence 346678999999766788999999998 99999999999999999874 5 899999999998754
No 86
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=97.98 E-value=1e-05 Score=60.21 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=27.9
Q ss_pred CCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 300 RIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 300 ~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d 30 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 356799999999999999999999999999
No 87
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.97 E-value=1.1e-06 Score=91.51 Aligned_cols=113 Identities=13% Similarity=0.100 Sum_probs=1.3
Q ss_pred cccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccccCCCCCCCCcccccccccCCCc
Q 013310 293 VSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTES 372 (445)
Q Consensus 293 v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~~~~~~ 372 (445)
..+.|..+++++++++++.++++.|.+++.+.+||+|+ |+++|+| |.+|++. +. ..+.... +....
T Consensus 95 ~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGiv--t~~Dl~~-------~~--~~~v~~i--m~~~~ 160 (486)
T 2cu0_A 95 AERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGII--TKKDIAA-------RE--GKLVKEL--MTKEV 160 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEE--EHHHhcc-------CC--CCCHHHH--ccCCC
Confidence 34578888999999999999999999999999999998 9999999 9999875 00 1111111 12245
Q ss_pred eEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHHHh
Q 013310 373 VVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEELL 428 (445)
Q Consensus 373 ~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~l~ 428 (445)
+.++++.++.+..+.|........-+++ ++|+++|+||.+|+++.+-
T Consensus 161 ~~v~~~~~l~eal~~m~~~~~~~lpVVd---------e~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 161 ITVPESIEVEEALKIMIENRIDRLPVVD---------ERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -------------------------------------------------------C
T ss_pred eEECCcCcHHHHHHHHHHcCCCEEEEEe---------cCCeEEEEEEHHHHHHhhh
Confidence 6788888998888888876655555666 7899999999999999864
No 88
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.96 E-value=1.2e-05 Score=69.11 Aligned_cols=48 Identities=21% Similarity=0.188 Sum_probs=40.6
Q ss_pred Ccccccccc--CCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCC
Q 013310 291 TPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLP 338 (445)
Q Consensus 291 ~~v~~im~~--~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv 338 (445)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|+.|+++|+|
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Giv 77 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIF 77 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEE
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEe
Confidence 478999988 899999999999999999999999999999433444444
No 89
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=97.96 E-value=7.3e-06 Score=68.60 Aligned_cols=58 Identities=9% Similarity=0.003 Sum_probs=52.1
Q ss_pred CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccccc
Q 013310 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKLNE 350 (445)
Q Consensus 290 ~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~i~ 350 (445)
+.+++++|.++++++++++++.++++.|.+++.+.+||+|+ |++.|++ |.+|+.+...
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Giv--t~~dl~~~~~ 61 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMV--HLSRLLEGRK 61 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEE--EHHHHHTTCS
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEE--EHHHHHHHHh
Confidence 46889999999999999999999999999999999999998 8888998 8888876544
No 90
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.95 E-value=1.4e-05 Score=67.59 Aligned_cols=55 Identities=9% Similarity=0.100 Sum_probs=45.7
Q ss_pred CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcc
Q 013310 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKP 346 (445)
Q Consensus 290 ~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~ 346 (445)
..+++++|.++++++++++++.++++.|.+++.+.+||+|+.|+++|+| |.+|++
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Giv--t~~dl~ 60 (138)
T 2yzi_A 6 KAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFF--TKSDII 60 (138)
T ss_dssp TSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE--EHHHHH
T ss_pred hhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEE--eHHHHH
Confidence 3678999999999999999999999999999999999999555555555 555554
No 91
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=97.93 E-value=1.1e-05 Score=68.40 Aligned_cols=59 Identities=12% Similarity=0.184 Sum_probs=52.0
Q ss_pred cccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC
Q 013310 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (445)
Q Consensus 224 ~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~ 287 (445)
.+.+++++|+| +.++++++++. ++++.|.+++.+.+||+|++ ++++|+|+.+|+++...
T Consensus 68 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 68 DSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHTTC-
T ss_pred CCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHHh
Confidence 45789999975 67899999998 99999999999999999865 79999999999998653
No 92
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.92 E-value=1.3e-05 Score=69.45 Aligned_cols=40 Identities=5% Similarity=-0.081 Sum_probs=36.8
Q ss_pred Cccccccc--cCCceeCCCCCHHHHHHHHhhCCCeEEEEEcc
Q 013310 291 TPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA 330 (445)
Q Consensus 291 ~~v~~im~--~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde 330 (445)
.+++++|. ++++++++++++.++++.|.+++.+.+||+|+
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 56 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD 56 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC
Confidence 56889998 78899999999999999999999999999993
No 93
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.91 E-value=1.4e-05 Score=69.78 Aligned_cols=39 Identities=13% Similarity=0.070 Sum_probs=36.9
Q ss_pred CccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 291 TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 291 ~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
.+++++|.++++++++++++.+|++.|.+++.+.+||+|
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd 43 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVD 43 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 578899988999999999999999999999999999999
No 94
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.90 E-value=9.5e-06 Score=68.13 Aligned_cols=59 Identities=12% Similarity=0.107 Sum_probs=52.7
Q ss_pred CCccccccc--cCCceeCCCCCHHHHHHHHhhCCCeEEEEEccC-CCccCCCCCCCCCcccccc
Q 013310 290 ETPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKLNE 350 (445)
Q Consensus 290 ~~~v~~im~--~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~-G~~~Giv~~T~~di~~~i~ 350 (445)
+.+++++|. ++++++++++++.++++.|.+++.+.+||+|+. |+++|+| |.+|+++...
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Giv--t~~dl~~~~~ 65 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGIL--LAKDLLRYML 65 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEE--EGGGGGGGGT
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEE--EHHHHHhHhc
Confidence 467889987 678899999999999999999999999999986 8999999 9999987654
No 95
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.89 E-value=1.3e-05 Score=66.40 Aligned_cols=59 Identities=22% Similarity=0.304 Sum_probs=53.0
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
+.+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ ++++|+++.+|+++..
T Consensus 62 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 62 LAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAK 120 (125)
T ss_dssp TTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred ccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 457789999986 578899999998 9999999999999999986 7999999999998754
No 96
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.87 E-value=1.2e-05 Score=67.33 Aligned_cols=58 Identities=9% Similarity=0.183 Sum_probs=51.2
Q ss_pred cccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 224 ~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
.+.+++++|.+ +.++++++++. ++++.|.+++.+++||+|++ ++++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDEF-GGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECTT-SCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 45689999964 56899999998 99999999999999999865 7999999999998754
No 97
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.87 E-value=2.7e-05 Score=69.63 Aligned_cols=61 Identities=11% Similarity=0.169 Sum_probs=53.8
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~ 287 (445)
..+.+++++|.+ +++++++++++. ++++.|.+++.+++||++++ ++++|+|+.+|+++...
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTSC
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 456789999985 577899999998 99999999999999999865 79999999999987643
No 98
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.86 E-value=1.3e-05 Score=67.25 Aligned_cols=58 Identities=22% Similarity=0.340 Sum_probs=51.8
Q ss_pred ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 225 ~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
+.+++++|++ ++.++++++++. ++++.|.+++.+++||++++ ++++|+++.+|+++..
T Consensus 66 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dll~~~ 123 (133)
T 2ef7_A 66 ETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDDK-GNLKGIISIRDITRAI 123 (133)
T ss_dssp TCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred ccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 4789999986 577899999998 99999999999999999865 7999999999998754
No 99
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.85 E-value=9.5e-06 Score=69.47 Aligned_cols=60 Identities=18% Similarity=0.396 Sum_probs=52.3
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
..+.+|+++|.+ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++..
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~ 141 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAA 141 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHH
Confidence 356789999986 567899999998 99999999999999999865 7999999999999764
No 100
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.85 E-value=2.2e-05 Score=66.21 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=45.0
Q ss_pred CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCc
Q 013310 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKK 345 (445)
Q Consensus 290 ~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di 345 (445)
+.+++++|.+++.++++++++.++++.|.+++.+.+||+|+.|+++|++ |.+|+
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Giv--t~~dl 60 (138)
T 2p9m_A 7 NIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIV--TTTDI 60 (138)
T ss_dssp TCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEE--EHHHH
T ss_pred cCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEE--EHHHH
Confidence 3678899988999999999999999999999999999999555555555 55555
No 101
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.85 E-value=1.9e-05 Score=66.55 Aligned_cols=59 Identities=24% Similarity=0.383 Sum_probs=52.7
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||++ + ++++|+|+.+|+++..
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDA 129 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHH
Confidence 457789999986 578899999998 999999999999999998 4 7999999999998754
No 102
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.84 E-value=1.4e-05 Score=68.63 Aligned_cols=48 Identities=19% Similarity=0.084 Sum_probs=40.0
Q ss_pred Cccccccc--cCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCC
Q 013310 291 TPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLP 338 (445)
Q Consensus 291 ~~v~~im~--~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv 338 (445)
.+++++|. ++++++++++++.++++.|.+++.+.+||+|+.|+++|+|
T Consensus 15 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Giv 64 (150)
T 3lqn_A 15 IFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLI 64 (150)
T ss_dssp CBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE
T ss_pred CChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEE
Confidence 67889987 5689999999999999999999999999999444444444
No 103
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.84 E-value=1.5e-05 Score=66.96 Aligned_cols=58 Identities=16% Similarity=0.179 Sum_probs=46.2
Q ss_pred CCccccccc--cCCceeCCCCCHHHHHHHHhhCCCeEEEEEccC-CCccCCCCCCCCCccccc
Q 013310 290 ETPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKLN 349 (445)
Q Consensus 290 ~~~v~~im~--~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~-G~~~Giv~~T~~di~~~i 349 (445)
+.+++++|. .+++++++++++.++++.|.+++.+.+||+|+. |++.|++ |.+|+++..
T Consensus 5 ~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Giv--t~~dl~~~~ 65 (130)
T 3i8n_A 5 DVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFV--HRLELFKMQ 65 (130)
T ss_dssp --CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEEC--CHHHHHHHH
T ss_pred cCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEE--EHHHHHHHH
Confidence 367889987 445689999999999999999999999999965 6677777 666666544
No 104
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.83 E-value=2.1e-05 Score=66.85 Aligned_cols=54 Identities=11% Similarity=0.170 Sum_probs=43.2
Q ss_pred CccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEccCC--CccCCCCCCCCCcc
Q 013310 291 TPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKG--KSKTLPPMTDGKKP 346 (445)
Q Consensus 291 ~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G--~~~Giv~~T~~di~ 346 (445)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|+.| +++|++ |.+|++
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Giv--t~~dl~ 60 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVV--SERDIL 60 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEE--EHHHHH
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEE--EHHHHH
Confidence 568899999999999999999999999999999999999444 444444 444443
No 105
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.83 E-value=2.5e-05 Score=68.30 Aligned_cols=40 Identities=5% Similarity=-0.081 Sum_probs=35.5
Q ss_pred Cccccccc--cCCceeCCCCCHHHHHHHHhhCCCeEEEEEcc
Q 013310 291 TPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA 330 (445)
Q Consensus 291 ~~v~~im~--~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde 330 (445)
.+++++|+ .++.++++++++.+|++.|.+++.+.+||+|+
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~ 56 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD 56 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC
Confidence 35678885 57889999999999999999999999999993
No 106
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.83 E-value=2.7e-05 Score=73.74 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=38.2
Q ss_pred CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 290 ~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
+.+|+++|.+++++|.+++++.++.+.|.+++.+.+||||
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd 51 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVD 51 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEES
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 4689999999999999999999999999999999999998
No 107
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.81 E-value=2.3e-05 Score=67.81 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=51.3
Q ss_pred ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 225 ~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
+.+|+++| + ++.++++++++. ++++.|.+++.+++||++++ ++++|+|+.+|+++..
T Consensus 85 ~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~l 141 (153)
T 3oco_A 85 KAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEEL 141 (153)
T ss_dssp TSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHHH
T ss_pred CCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHHH
Confidence 57899999 3 578999999998 99999999999999999865 7999999999998764
No 108
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.80 E-value=2.8e-05 Score=67.19 Aligned_cols=57 Identities=16% Similarity=0.050 Sum_probs=46.0
Q ss_pred CCcccccccc--CCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCCCCCCCCcccc
Q 013310 290 ETPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLPPMTDGKKPKL 348 (445)
Q Consensus 290 ~~~v~~im~~--~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv~~T~~di~~~ 348 (445)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|+.|+++|+| |.+|+++.
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Giv--t~~dl~~~ 68 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLI--SMTMMMDA 68 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEE--EHHHHHHH
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEe--eHHHHHHH
Confidence 3678899876 889999999999999999999999999999655555555 55555433
No 109
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.80 E-value=1.6e-05 Score=66.75 Aligned_cols=60 Identities=23% Similarity=0.355 Sum_probs=53.2
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~ 287 (445)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||+++ ++++|+++.+|+++...
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 71 PNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHLP 130 (133)
T ss_dssp TTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTCC
T ss_pred ccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 356789999986 577899999998 9999999999999999986 79999999999987643
No 110
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.80 E-value=2.8e-05 Score=67.55 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=37.6
Q ss_pred CCccccccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 290 ETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 290 ~~~v~~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
..+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd 51 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVE 51 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEES
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEe
Confidence 4678999999999999999999999999999999999998
No 111
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.78 E-value=1.2e-05 Score=71.03 Aligned_cols=61 Identities=23% Similarity=0.395 Sum_probs=53.9
Q ss_pred cCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 222 ~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
...+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++..
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRAA 154 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 4567889999986 567899999998 99999999999999999865 8999999999998764
No 112
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.77 E-value=3.1e-05 Score=67.85 Aligned_cols=60 Identities=20% Similarity=0.279 Sum_probs=53.8
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~ 287 (445)
..+.+|+++|++ +++++++++++. ++++.|.+++++++||+++ ++++|+|+.+|+++...
T Consensus 90 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 90 SLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred cccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 456789999985 678899999998 9999999999999999987 79999999999998754
No 113
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.77 E-value=1.5e-05 Score=67.16 Aligned_cols=57 Identities=16% Similarity=0.138 Sum_probs=50.0
Q ss_pred ccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 225 EKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 225 ~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
..+++++|. ++.++++++++. ++++.|.+++.+.+||+|++ ++++|+++.+|+++..
T Consensus 69 ~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 69 KEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVTVEDILEEI 125 (130)
T ss_dssp HHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred hhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEeeHHHHHHHH
Confidence 457899994 367899999998 99999999999999999865 7999999999998753
No 114
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.77 E-value=1.5e-05 Score=69.23 Aligned_cols=60 Identities=23% Similarity=0.330 Sum_probs=52.9
Q ss_pred cCcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 222 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 222 ~l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
...+.+++++|++ ++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+++..
T Consensus 92 ~~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dll~~l 151 (157)
T 1o50_A 92 RLIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDEK-GEIVGDLNSLEILLAL 151 (157)
T ss_dssp CCSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred HHcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcCC-CEEEEEEEHHHHHHHH
Confidence 3467889999985 67899999998 99999999999999999854 7999999999998753
No 115
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.76 E-value=1.9e-05 Score=68.12 Aligned_cols=60 Identities=13% Similarity=0.273 Sum_probs=52.0
Q ss_pred ccccccccccC----CceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 225 EKTAEEAMTPI----ESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 225 ~~~V~diMtpr----~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
+.+++++|.++ .++.++++++++. ++++.|.+++.+++||++++ ++++|+|+.+|+++..
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 56799999743 3678999999998 99999999999999999864 7999999999998753
No 116
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.74 E-value=2.6e-05 Score=67.79 Aligned_cols=48 Identities=17% Similarity=0.127 Sum_probs=40.5
Q ss_pred Ccccccccc--CCceeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCC
Q 013310 291 TPVSAVSIR--RIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLP 338 (445)
Q Consensus 291 ~~v~~im~~--~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv 338 (445)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|+.|+++|+|
T Consensus 14 ~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGiv 63 (159)
T 1yav_A 14 ATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLI 63 (159)
T ss_dssp CBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEE
T ss_pred hhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEe
Confidence 678899877 899999999999999999999999999999444444444
No 117
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.74 E-value=5.3e-05 Score=64.14 Aligned_cols=39 Identities=10% Similarity=0.384 Sum_probs=35.2
Q ss_pred Ccccc---ccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEc
Q 013310 291 TPVSA---VSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVK 329 (445)
Q Consensus 291 ~~v~~---im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvd 329 (445)
.++++ +|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 8 ~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 49 (144)
T 2nyc_A 8 IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID 49 (144)
T ss_dssp SBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred cchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEc
Confidence 45666 7778899999999999999999999999999999
No 118
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.73 E-value=4.4e-05 Score=79.65 Aligned_cols=112 Identities=18% Similarity=0.165 Sum_probs=84.2
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCCc
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRIP 302 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~~ 302 (445)
-.+.+|+++|++ .++++++++.++. ++++.|.+++...+||+|++ ++++|+|+.+|+++..... ...++.+.+..+
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~V 247 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFP-NSAKDKQGRLLV 247 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCT-TCCBCTTSCBCC
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhcc-cchhhhccceee
Confidence 356789999996 4688999999998 99999999999999999875 8999999999999864322 233444433333
Q ss_pred --eeCCCCCHHHHHHHHhhCCCeEEEEEccCCCccCCC
Q 013310 303 --RVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKTLP 338 (445)
Q Consensus 303 --~V~~~~~l~~al~~m~~~~~~~a~Vvde~G~~~Giv 338 (445)
.+.......+.++.+.+.+.+.+.|-..+|...|++
T Consensus 248 ~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~ 285 (511)
T 3usb_A 248 GAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVI 285 (511)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHH
T ss_pred eeeeeeccchHHHHHHHHhhccceEEecccccchhhhh
Confidence 344445567778888899999888876555544444
No 119
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.72 E-value=2.9e-05 Score=67.54 Aligned_cols=55 Identities=9% Similarity=0.145 Sum_probs=49.5
Q ss_pred cccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhh
Q 013310 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLL 283 (445)
Q Consensus 224 ~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll 283 (445)
.+.+++++|+| +.++++++++. ++++.|.+++.+.+||+|++ ++++|+|+.+|++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEEHHHHC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEEHHHhc
Confidence 45789999975 67899999998 99999999999999999875 7999999999986
No 120
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.72 E-value=5.6e-05 Score=67.20 Aligned_cols=59 Identities=8% Similarity=0.048 Sum_probs=47.8
Q ss_pred CCCccccccc--cCCceeCCCCCHHHHHHHHhhCCCeEEEEEccC-CCccCCCCCCCCCccccc
Q 013310 289 TETPVSAVSI--RRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAK-GKSKTLPPMTDGKKPKLN 349 (445)
Q Consensus 289 ~~~~v~~im~--~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde~-G~~~Giv~~T~~di~~~i 349 (445)
...+++++|. ++++++++++++.++++.|.+++.+.+||+|+. |+++|+| |.+|++...
T Consensus 34 ~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGiv--t~~Dl~~~~ 95 (173)
T 3ocm_A 34 AERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIG--RAKDLVADL 95 (173)
T ss_dssp TTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEE--EHHHHHHHH
T ss_pred CCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEE--EHHHHHHHH
Confidence 3478999986 468899999999999999999999999999965 6666666 666665443
No 121
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.71 E-value=3.2e-05 Score=70.88 Aligned_cols=61 Identities=15% Similarity=0.194 Sum_probs=53.8
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~ 287 (445)
..+.+|+++|++ +++++++++++. ++++.|.+++...+||+|++ ++++|+|+.+|++....
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALVR 173 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 356789999975 578899999998 99999999999999999875 79999999999987643
No 122
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.64 E-value=7.3e-06 Score=84.41 Aligned_cols=111 Identities=14% Similarity=0.095 Sum_probs=0.4
Q ss_pred cccccCCceeCCCCCHHHHHHHHhhCCCeEEEEEcc---CCCccCCCCCCCCCcccccccCCCCCCCCcccccccccCCC
Q 013310 295 AVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKA---KGKSKTLPPMTDGKKPKLNEAKGGDCDLTAPLLSKQDEKTE 371 (445)
Q Consensus 295 ~im~~~~~~V~~~~~l~~al~~m~~~~~~~a~Vvde---~G~~~Giv~~T~~di~~~i~~~~~~~~~~~~~~~~~~~~~~ 371 (445)
..|..+++++.++.++.|+++.|.++++.-+||+|+ .|+++||| |.+|+-.+ +..++..+.+ ...
T Consensus 142 ~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIv--T~RD~rf~--------d~~~~V~evM--T~~ 209 (556)
T 4af0_A 142 NGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIV--TGRDVQFQ--------DAETPIKSVM--TTE 209 (556)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEE--eccccccc--------ccceEhhhhc--ccc
Confidence 346788999999999999999999999999999986 68999999 99997421 1122222222 223
Q ss_pred ceEeeccCCCccccccccCCCCCCCCCccccccccCCCCCCceEEEeehhhHHHH
Q 013310 372 SVVVDVDRPLSSGSMNRLSSSQRSDSTTNGLIYASEDIEDGEVIGIITLEDVFEE 426 (445)
Q Consensus 372 ~~~v~~~~~i~~~~~~~~~~~~~~~~tl~g~~~~~~~~e~g~l~GIVT~~Dile~ 426 (445)
-+.++...++.+.++.+....-+-.-+++ ++|+++|+||..|+.+.
T Consensus 210 lvt~~~~~~leeA~~iL~~~kieklpVVd---------~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 210 VVTGSSPITLEKANSLLRETKKGKLPIVD---------SNGHLVSLVARSDLLKN 255 (556)
T ss_dssp -------------------------------------------------------
T ss_pred eEEecCCCCHHHHHHHHHHccccceeEEc---------cCCcEEEEEEechhhhh
Confidence 56677778888888877766555444555 78999999999999876
No 123
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.60 E-value=6.8e-05 Score=66.52 Aligned_cols=39 Identities=21% Similarity=0.141 Sum_probs=35.2
Q ss_pred CCccccccccC----Ccee--CCCCCHHHHHHHHhhCCCeEEEEE
Q 013310 290 ETPVSAVSIRR----IPRV--PSDMPLYDILNEFQKGSSHMAAVV 328 (445)
Q Consensus 290 ~~~v~~im~~~----~~~V--~~~~~l~~al~~m~~~~~~~a~Vv 328 (445)
..+++++|.++ ++++ ++++++.+|++.|.+++.+.+||+
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv 54 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVV 54 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEE
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEE
Confidence 36788998776 7888 999999999999999999999999
No 124
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.44 E-value=9.4e-05 Score=70.83 Aligned_cols=61 Identities=16% Similarity=0.294 Sum_probs=53.7
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRP 287 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~ 287 (445)
..+.+|+++|++ +++++++++++. ++++.|.+++.+.+||+|++ ++++|+|+..|++....
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC-
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHH
Confidence 357789999975 578899999998 99999999999999999865 89999999999998654
No 125
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.31 E-value=0.00014 Score=70.12 Aligned_cols=60 Identities=15% Similarity=0.280 Sum_probs=53.3
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
..+.+|+++|++ +++++++++++. ++++.|.+++.+.+||+|++ ++++|+|+.+|++...
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i 257 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVI 257 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 356789999975 578899999998 99999999999999999865 7999999999998754
No 126
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.27 E-value=0.00032 Score=73.47 Aligned_cols=57 Identities=9% Similarity=0.090 Sum_probs=46.0
Q ss_pred CCccccccccCCceeCCC-CCHHHHHHHHhhCCCeEEEEEc-cCCCccCCCCCCCCCcccc
Q 013310 290 ETPVSAVSIRRIPRVPSD-MPLYDILNEFQKGSSHMAAVVK-AKGKSKTLPPMTDGKKPKL 348 (445)
Q Consensus 290 ~~~v~~im~~~~~~V~~~-~~l~~al~~m~~~~~~~a~Vvd-e~G~~~Giv~~T~~di~~~ 348 (445)
..+|+++|.+++++++++ +++.++++.|.+++.+.+||+| +.|+++|+| |.+|+++.
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiV--t~~Dll~~ 441 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVV--GQETLITQ 441 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEE--EHHHHHHH
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEE--EHHHHHHH
Confidence 367999999999999999 9999999999999999999998 545555555 44444433
No 127
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.13 E-value=0.00032 Score=72.45 Aligned_cols=60 Identities=17% Similarity=0.302 Sum_probs=53.8
Q ss_pred CcccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccC
Q 013310 223 LTEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVR 286 (445)
Q Consensus 223 l~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~ 286 (445)
-.+.+++++|++ +++++++++++. ++++.|.+++...+||+|++ ++++|+|+.+|+++..
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i 275 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVL 275 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHH
Confidence 367899999975 688999999998 99999999999999999875 8999999999998754
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.38 E-value=0.0083 Score=62.02 Aligned_cols=100 Identities=14% Similarity=0.177 Sum_probs=69.0
Q ss_pred cccccccccccCCceEEeeCCCCccHHHHHHHHHcCCcEEEeEeCCCCCEEEEEEhhhhhccCCCCCCccccccccCC--
Q 013310 224 TEKTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSAVSIRRI-- 301 (445)
Q Consensus 224 ~~~~V~diMtpr~~vv~v~~~~sl~~e~l~~~~~~~~s~~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~im~~~~-- 301 (445)
.+.+++++|++ .+++++++++++. ++++.|.+++..++||+|++ ++++|+++.+|+++...... ...+...+-.
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~~~~~-~~~d~~~~~~vg 225 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVIEFPH-AAKDEFGRLLVA 225 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHHHCTT-CCBCTTSCBCCE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHHhccc-cccCcCCcEEEE
Confidence 56789999985 2577899999998 99999999999999999875 89999999999987643211 1111110111
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEE
Q 013310 302 PRVPSDMPLYDILNEFQKGSSHMAAV 327 (445)
Q Consensus 302 ~~V~~~~~l~~al~~m~~~~~~~a~V 327 (445)
..++......+.++.+.+.+...+.+
T Consensus 226 ~~i~~~~~~~~~a~~l~~~G~d~ivi 251 (491)
T 1zfj_A 226 AAVGVTSDTFERAEALFEAGADAIVI 251 (491)
T ss_dssp EEECSSTTHHHHHHHHHHHTCSEEEE
T ss_pred EeccCchhHHHHHHHHHHcCCCeEEE
Confidence 12333334455566666667776543
No 129
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=94.71 E-value=0.0053 Score=48.42 Aligned_cols=49 Identities=12% Similarity=0.078 Sum_probs=42.6
Q ss_pred ccccCCCceEeeccCCCccccccccCCCCCC-CCCcccccc-ccCCCCC-Cc
Q 013310 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED-GE 413 (445)
Q Consensus 365 ~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~-~~tl~g~~~-~~~~~e~-g~ 413 (445)
+.+...+.|.++|.+++.++++.++..++.. +.|++||++ .++++|. |.
T Consensus 12 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~dTlgG~i~~~lg~iP~~Ge 63 (91)
T 2pli_A 12 IHAVSSERWRIHAATEIEDINTFFGTEYSSEEADTIGGLVIQELGHLPVRGE 63 (91)
T ss_dssp EEEEETTEEEEETTCBHHHHHHHHCCCCCCSSCCBHHHHHHHHHSSCCCTTC
T ss_pred eEEeCCCEEEEEcCCCHHHHHHHhCCCCCCCCCccHHHHHHHHhCCCCCCCC
Confidence 4455678899999999999999999988865 999999999 8999987 44
No 130
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=94.47 E-value=0.0076 Score=46.64 Aligned_cols=47 Identities=15% Similarity=0.057 Sum_probs=41.2
Q ss_pred cccCCCceEeeccCCCccccccccCCCCCC-CCCcccccc-ccCCCCCC
Q 013310 366 QDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIEDG 412 (445)
Q Consensus 366 ~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~-~~tl~g~~~-~~~~~e~g 412 (445)
.+...+.|.++|.+++.|+++.++..++.. +.|++||++ .++++|.-
T Consensus 4 ~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~Tl~G~i~~~lg~iP~~ 52 (83)
T 3llb_A 4 KPLPSGDFIVKALTPVDAFNDFFGSEFSDEEFDTVGGLVMSAFGHLPKR 52 (83)
T ss_dssp EECTTSCEEEETTCBHHHHHHHHCCCCCTTTCSBHHHHHHHHHSSCCCT
T ss_pred EEeCCCEEEEEccCCHHHHHHHhCCCCCCCCCcCHHHHHHHHhCcCCCC
Confidence 345677899999999999999999988866 899999999 88999863
No 131
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=94.46 E-value=0.0086 Score=46.10 Aligned_cols=46 Identities=24% Similarity=0.197 Sum_probs=40.8
Q ss_pred cccCCCceEeeccCCCccccccccCCCCCC-CCCcccccc-ccCCCCC
Q 013310 366 QDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED 411 (445)
Q Consensus 366 ~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~-~~tl~g~~~-~~~~~e~ 411 (445)
.+...+.|.++|.+++.|+++.++..++.. +.|++||++ .++++|.
T Consensus 4 ~~~~dg~~~v~g~~~l~dl~~~l~~~l~~~~~~Tl~G~i~~~lg~iP~ 51 (81)
T 3lae_A 4 IQQSDGSMIIDGSANLRDLNKMFNWELDTEDARTFNGLILEHLEEIPD 51 (81)
T ss_dssp EECTTSCEEEETTCBHHHHHHHHCCCCCCSSCSBHHHHHHHHCSSCCC
T ss_pred EEeCCCEEEEEeeCCHHHHHHHhCCCCCCCCCccHHHHHHHHhCCCCC
Confidence 345677899999999999999999988865 899999999 8999886
No 132
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=94.12 E-value=0.0079 Score=46.95 Aligned_cols=47 Identities=13% Similarity=0.036 Sum_probs=41.0
Q ss_pred ccCCCceEeeccCCCccccccccCCCCCC-CCCcccccc-ccCCCCC-Cc
Q 013310 367 DEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED-GE 413 (445)
Q Consensus 367 ~~~~~~~~v~~~~~i~~~~~~~~~~~~~~-~~tl~g~~~-~~~~~e~-g~ 413 (445)
+...+.|.++|++++.++++.++..++.. +.|++||++ .++++|. |.
T Consensus 4 ~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~dTl~G~v~~~lg~iP~~Gd 53 (87)
T 2rk5_A 4 EIADNTYIVLGTMTLNDFNEYFETDLESDNVDTIAGFYLTGVGTIPSQEE 53 (87)
T ss_dssp EEETTEEEEETTSBHHHHHHHHTCCCCCTTCCBHHHHHHHHHCSCCCSSS
T ss_pred EeCCCEEEEEccCCHHHHHHHhCCCCCCCCcccHHHHHHHHhCcCCCCCC
Confidence 34567899999999999999999998865 999999999 8999976 54
No 133
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=93.90 E-value=0.0095 Score=47.08 Aligned_cols=49 Identities=18% Similarity=0.080 Sum_probs=42.3
Q ss_pred ccccCCCceEeeccCCCccccccccCCCCCC-CCCcccccc-ccCCCCC-Cc
Q 013310 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED-GE 413 (445)
Q Consensus 365 ~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~-~~tl~g~~~-~~~~~e~-g~ 413 (445)
+.+...+.|.++|.+++.++++.++..++.. +.|++||++ .++++|. |.
T Consensus 10 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~TlgG~i~~~lg~iP~~Gd 61 (93)
T 2r2z_A 10 YTQVADNEYLVQGRMLIDEFNEVFETDLHMSDVDTMAGYLITALGTIPDEGE 61 (93)
T ss_dssp EEEEETTEEEEETTSBHHHHHHHHTCCCCCTTCCBHHHHHHHHHSSCCCTTC
T ss_pred eEEeCCCEEEEECCCCHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCCCCCC
Confidence 3445678899999999999999999998865 999999999 8999986 44
No 134
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=93.72 E-value=0.013 Score=46.06 Aligned_cols=49 Identities=16% Similarity=0.058 Sum_probs=42.2
Q ss_pred ccccCCCceEeeccCCCccccccccCCCCC--C-CCCcccccc-ccCCCCC-Cc
Q 013310 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQR--S-DSTTNGLIY-ASEDIED-GE 413 (445)
Q Consensus 365 ~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~--~-~~tl~g~~~-~~~~~e~-g~ 413 (445)
+.+...+.|.++|.+++.++++.++..++. . +.|++||++ .++++|. |.
T Consensus 9 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~~~TlgG~i~~~lg~iP~~Gd 62 (90)
T 2p13_A 9 AEQQADGTWLMDGWISIRKASNLLEHDLVDEAERYSTLGGYLLWQFGYIPAAGE 62 (90)
T ss_dssp EEECTTSCEEEETTSBHHHHHHHHTSCCCCTTCCCCBHHHHHHHHHSSCCCTTC
T ss_pred eEEeCCCEEEEECcCCHHHHHHHHCCCCCCcCCCCccHHHHHHHHhCCCCCCCC
Confidence 344567889999999999999999998885 4 999999999 8999987 54
No 135
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=93.49 E-value=0.015 Score=45.22 Aligned_cols=47 Identities=13% Similarity=0.051 Sum_probs=40.9
Q ss_pred ccCCCceEeeccCCCccccccccCC-CCC---C-CCCcccccc-ccCCCCC-Cc
Q 013310 367 DEKTESVVVDVDRPLSSGSMNRLSS-SQR---S-DSTTNGLIY-ASEDIED-GE 413 (445)
Q Consensus 367 ~~~~~~~~v~~~~~i~~~~~~~~~~-~~~---~-~~tl~g~~~-~~~~~e~-g~ 413 (445)
+...+.|.++|.+++.++++.++.. ++. . +.|++||++ .++++|. |.
T Consensus 5 ~~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~Gd 58 (86)
T 2pls_A 5 QREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGD 58 (86)
T ss_dssp ECTTSCEEEETTCBHHHHHHHHTCSCCTTTTSCSCCBHHHHHHHHHTSCCCTTC
T ss_pred EeCCCeEEEEcccCHHHHHHHhCCCcCCCccCCCcccHHHHHHHHhCCCCCCCC
Confidence 3456789999999999999999998 876 4 999999999 8999986 44
No 136
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=93.33 E-value=0.017 Score=45.59 Aligned_cols=49 Identities=22% Similarity=0.191 Sum_probs=38.7
Q ss_pred ccccCCCceEeeccCCCccccccccCC-CC-CC-CCCcccccc-ccCCCCC-Cc
Q 013310 365 KQDEKTESVVVDVDRPLSSGSMNRLSS-SQ-RS-DSTTNGLIY-ASEDIED-GE 413 (445)
Q Consensus 365 ~~~~~~~~~~v~~~~~i~~~~~~~~~~-~~-~~-~~tl~g~~~-~~~~~e~-g~ 413 (445)
+.+...+.|.++|.+++.++++.++.. ++ .. +.|++||++ .++++|. |.
T Consensus 11 i~~~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd 64 (92)
T 2o3g_A 11 VQGNPDESLTVEGALEYVELAPQLNLPQQEEDADFHTVAGLIMEELQTIPDVGD 64 (92)
T ss_dssp ------CCSEEETTCBHHHHTTTTTCCCCCTTCSCSBHHHHHHHHHTSCCCTTC
T ss_pred eEEcCCCEEEEEccCCHHHHHHHhCCCCCCcCCCcccHHHHHHHHhCCCCCCCC
Confidence 344567789999999999999999998 87 44 999999999 8999986 44
No 137
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=93.23 E-value=0.021 Score=44.42 Aligned_cols=47 Identities=17% Similarity=0.169 Sum_probs=40.5
Q ss_pred ccCCCceEeeccCCCccccccccCC-CCC-C-CCCcccccc-ccCCCCC-Cc
Q 013310 367 DEKTESVVVDVDRPLSSGSMNRLSS-SQR-S-DSTTNGLIY-ASEDIED-GE 413 (445)
Q Consensus 367 ~~~~~~~~v~~~~~i~~~~~~~~~~-~~~-~-~~tl~g~~~-~~~~~e~-g~ 413 (445)
+...+.|.++|.+++.++++.++.. ++. . +.|++||++ .++++|. |.
T Consensus 5 ~~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd 56 (86)
T 2p4p_A 5 RRNEDSWLIDGATPLEDVMRALNIHTFPRDENYETIGGFMMYMLRXIPXXTD 56 (86)
T ss_dssp CCCCSEEEEETTSBHHHHHHHTTCCCSCCSCSSCBHHHHHHHHHCSCCCTTC
T ss_pred EeCCCEEEEEccCCHHHHHHHhCCCCCCcCCCCccHHHHHHHHhCCCCCCCc
Confidence 3456789999999999999999996 875 4 999999999 8999987 54
No 138
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=93.08 E-value=0.015 Score=46.00 Aligned_cols=49 Identities=16% Similarity=0.089 Sum_probs=39.2
Q ss_pred ccccCCCceEeeccCCCccccccccCCCCC---C-CCCcccccc-ccCCCCC-Cc
Q 013310 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQR---S-DSTTNGLIY-ASEDIED-GE 413 (445)
Q Consensus 365 ~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~---~-~~tl~g~~~-~~~~~e~-g~ 413 (445)
+.+...+.|.++|.+++.++++.++..++. . +.|++||++ .++++|. |.
T Consensus 12 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~~~dTlgG~i~~~lg~iP~~Gd 66 (94)
T 2oai_A 12 MVTREDGSFLIDGTLPIEELREVLGAELPDGEENNYHTLAGMCISYFGRIPHVGE 66 (94)
T ss_dssp EEECTTSCEEEETTCBHHHHHHHHTC-------CCCSBHHHHHHHHHSSCCCTTC
T ss_pred eEEeCCCeEEEeccCCHHHHHHHhCCCCCcccCCCCccHHHHHHHHhCCCCCCCC
Confidence 345567889999999999999999998875 4 999999999 8999987 54
No 139
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=93.07 E-value=0.015 Score=46.80 Aligned_cols=49 Identities=18% Similarity=0.300 Sum_probs=42.2
Q ss_pred cccCCCceEeeccCCCccccccccCCCCCC-CCCcccccc-ccCCCCC-Cce
Q 013310 366 QDEKTESVVVDVDRPLSSGSMNRLSSSQRS-DSTTNGLIY-ASEDIED-GEV 414 (445)
Q Consensus 366 ~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~-~~tl~g~~~-~~~~~e~-g~l 414 (445)
.+...+.|.++|.+++.|+++.++..+++. +.|++||++ .++++|. |..
T Consensus 7 ~~~~dg~~~v~G~~~l~dl~~~lg~~l~~e~~dTlgGli~~~lg~iP~~Gd~ 58 (101)
T 2p3h_A 7 TETSPDKWLIDGDTPLDEVERAIGYELPEGDYETISGLLFDHANALLKTGDV 58 (101)
T ss_dssp EEEETTEEEEETTCBHHHHHHHHTSCCCCSSCCBHHHHHHHHHCSCCCTTCE
T ss_pred EEeCCCEEEEEccCCHHHHHHHhCCCCCCCCCccHHHHHHHHhCCCCCCCCE
Confidence 344677899999999999999999988865 999999999 8999976 543
No 140
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=92.79 E-value=0.025 Score=46.49 Aligned_cols=49 Identities=12% Similarity=-0.081 Sum_probs=42.3
Q ss_pred cccccCCCceEeeccCCCccccccccCC--CCC----CCCCcccccc-ccCCCCCC
Q 013310 364 SKQDEKTESVVVDVDRPLSSGSMNRLSS--SQR----SDSTTNGLIY-ASEDIEDG 412 (445)
Q Consensus 364 ~~~~~~~~~~~v~~~~~i~~~~~~~~~~--~~~----~~~tl~g~~~-~~~~~e~g 412 (445)
.+.+...+.|.++|.+++.++++.++.. ++. .+.||+||++ .++++|.-
T Consensus 28 ~i~~~~dg~~~v~G~~~l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~lg~iP~~ 83 (113)
T 3ded_A 28 EIVQREDGSWLVDGMVSLDRFREFFELEAPLPGEAGGNIHTLAGVMLYQLGRVPSV 83 (113)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHHCSSCCT
T ss_pred ceEEecCCEEEEecccCHHHHHHHhCCCccCCcccCCCCccHHHHHHHHhCCCCCC
Confidence 3456677889999999999999999998 875 3899999999 89999973
No 141
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=89.92 E-value=0.058 Score=42.46 Aligned_cols=49 Identities=14% Similarity=0.098 Sum_probs=39.7
Q ss_pred ccccCCCceEeeccCCCccccccccCCCC------CCCCCcccccc-ccCCCCC-Cc
Q 013310 365 KQDEKTESVVVDVDRPLSSGSMNRLSSSQ------RSDSTTNGLIY-ASEDIED-GE 413 (445)
Q Consensus 365 ~~~~~~~~~~v~~~~~i~~~~~~~~~~~~------~~~~tl~g~~~-~~~~~e~-g~ 413 (445)
+.+...+.|.++|.+++.++++.++.... ..+.|++||++ .++++|. |.
T Consensus 9 i~~~~dg~~~v~G~~~l~dl~~~l~~~~~~~~~~~~~~~TlgG~i~~~lg~iP~~Gd 65 (93)
T 2nqw_A 9 FKVLGDGSYLFEGKTSLSDVRHYLDLPENAFGELGDEVDTLSGLFLEIKQELPHVGD 65 (93)
T ss_dssp EEECTTSCEEEETTCBHHHHHHHHTCCTTTTHHHHTTCSBHHHHHHHHHCSCCCTTC
T ss_pred eEEeCCCEEEEEcccCHHHHHHHhCCCcccccccCCCcccHHHHHHHHhCcCCCCCC
Confidence 34456788999999999999999998111 34899999999 8999986 44
No 142
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=53.89 E-value=15 Score=23.05 Aligned_cols=22 Identities=14% Similarity=0.147 Sum_probs=12.7
Q ss_pred CccHHHHHHHHHHHHHHHHHHHH
Q 013310 30 FGSVWWFVYAGISCVLVLFAGIM 52 (445)
Q Consensus 30 ~~s~~w~~~~~i~~~ll~lsafF 52 (445)
+-|.+|-++++.++. +++|..|
T Consensus 14 RTSLy~GLLlifvla-vlFssyf 35 (37)
T 3arc_L 14 RTSLYLGLLLILVLA-LLFSSYF 35 (37)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHH
T ss_pred hhhHHHHHHHHHHHH-HHhhhhc
Confidence 359999765554444 4444444
No 143
>1rij_A E6APN1 peptide; Trp-CAGE, E6-binding domain, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.32.1.1
Probab=45.20 E-value=5.2 Score=22.49 Aligned_cols=11 Identities=55% Similarity=0.888 Sum_probs=7.6
Q ss_pred CCCCCCCCCCC
Q 013310 19 NGGGPSSEGIP 29 (445)
Q Consensus 19 ~~~~~~~~~~~ 29 (445)
.||||||-.-|
T Consensus 11 kdggpssgrpp 21 (26)
T 1rij_A 11 KDGGPSSGRPP 21 (26)
T ss_dssp HTTGGGSSSCC
T ss_pred HcCCCCCCCCC
Confidence 37999875544
No 144
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A
Probab=27.43 E-value=1.8e+02 Score=23.69 Aligned_cols=19 Identities=11% Similarity=0.345 Sum_probs=12.7
Q ss_pred HHHHHHHHhhhccchhhHH
Q 013310 125 ILSVTFVLFFGEVIPQAIC 143 (445)
Q Consensus 125 ~~~t~lilvfgEiiPK~la 143 (445)
.+.|+..+=+|++.|++..
T Consensus 51 ~~~T~tTvGyGDi~P~t~~ 69 (137)
T 4h33_A 51 AIVTATTVGYGDIVPVTPI 69 (137)
T ss_dssp HHHHHTTCCCSSSCCCSHH
T ss_pred HHHHHHcccCCCCCCCCHh
Confidence 3445445668999999743
Done!