BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013311
(445 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S825|IF5Z_ARATH Probable eukaryotic translation initiation factor 5-2
OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1
Length = 437
Score = 563 bits (1452), Expect = e-160, Method: Compositional matrix adjust.
Identities = 299/445 (67%), Positives = 353/445 (79%), Gaps = 23/445 (5%)
Query: 1 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFG 60
MALQNIGASN +DAFYRYKMPKM+TK EG+GNGIKTN++N V+IAKALARPPSYTTKYFG
Sbjct: 1 MALQNIGASNRNDAFYRYKMPKMVTKTEGKGNGIKTNIINNVEIAKALARPPSYTTKYFG 60
Query: 61 NELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVN 120
ELGAQSKFDEKTGTSLVNGAH+T+KLAGLLENFIKK+VQCYGCGNPET+IIITKTQMVN
Sbjct: 61 CELGAQSKFDEKTGTSLVNGAHNTSKLAGLLENFIKKFVQCYGCGNPETEIIITKTQMVN 120
Query: 121 LKCAACGFVSEVDMRDKLTTFILKNPPVQKKTSKDKKSLRRAEKERLKEGEAADEELKKI 180
LKCAACGF+SEVDMRDKLT FILKNPP QKK SKDKK++R+AEKERLKEGE ADEE
Sbjct: 121 LKCAACGFISEVDMRDKLTNFILKNPPEQKKVSKDKKAMRKAEKERLKEGELADEE---- 176
Query: 181 KKEAGKKKGSSANSKDVTAKGASTKKKAHSSDDDHSPSRSQADENE-PAIDDADDDDDIQ 239
+++ KK + +N KD S K HSSD+D SP DEN +D DDDD ++
Sbjct: 177 QRKLKAKKKALSNGKD------SKTSKNHSSDEDISPKH---DENALEVDEDEDDDDGVE 227
Query: 240 WQTDTSLEAAKQRIQEQLSSVTADMVMLSTTEEKKKSGKKSPDRESKGHENGASGP---N 296
WQTDTS EAA++R+ EQLS+ TA+MVMLS E ++ KK+P +S G+ P
Sbjct: 228 WQTDTSREAAEKRMMEQLSAKTAEMVMLSAMEVEE---KKAPKSKSNGNVVKTENPPPQE 284
Query: 297 THLADQMKDFLKKGASASQFKSFLGSLSGTPQEVMDALFVALFDGIEKGFAKEVTKKKNY 356
+L MK++LKKG+ S KSF+ SLS PQ++MDALF ALFDG+ KGFAKEVTKKKNY
Sbjct: 285 KNLVQDMKEYLKKGSPISALKSFISSLSEPPQDIMDALFNALFDGVGKGFAKEVTKKKNY 344
Query: 357 LAAAT--QEEGSQMVLLHSLESFCGK-ARPAAVKEVALVLKALYDNDLLEEEFILDWYQK 413
LAAA QE+GSQM LL+S+ +FCGK A+KEVALVLKALYD D++EEE +LDWY+K
Sbjct: 345 LAAAATMQEDGSQMHLLNSIGTFCGKNGNEEALKEVALVLKALYDQDIIEEEVVLDWYEK 404
Query: 414 GLGGANKNSQVWKNAKPVIEWLQNA 438
GL GA+K+S VWKN KP +EWLQ+A
Sbjct: 405 GLTGADKSSPVWKNVKPFVEWLQSA 429
>sp|P48724|IF5_PHAVU Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris
GN=EIF5 PE=2 SV=1
Length = 443
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/447 (68%), Positives = 357/447 (79%), Gaps = 6/447 (1%)
Query: 1 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFG 60
MALQNIGA NSDDAFYRYKMP+M+TKIEGRGNGIKTNVVNMVDIAK LARP SYTTKYFG
Sbjct: 1 MALQNIGAGNSDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKRLARPASYTTKYFG 60
Query: 61 NELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVN 120
ELGAQSKFDEKTGTS VNGAH+TAKLAGLLE FIKKYVQCYGCGNPET+I+ITK QM+
Sbjct: 61 CELGAQSKFDEKTGTSHVNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQ 120
Query: 121 LKCAACGFVSEVDMRDKLTTFILKNPPVQKKTSKDKKSLRRAEKERLKEGEAADEELKKI 180
LKCAACGFVS+VDMRDKLTTFI+KNPP KK SKDKK++RRAEKERLKEGEAADEELKK+
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGEAADEELKKV 180
Query: 181 KKEAGKKKGSSANSKDVTAKGASTKKKAHSSDDD-HSPSRSQ-ADENEPAIDDADDDDDI 238
KKE KK SSA KD TAK +KKK SD+D SP+ Q ++ E +D DDDD +
Sbjct: 181 KKEVKKKGSSSA--KDGTAKSTISKKKGSGSDEDRRSPTHKQIEEKEEAKDEDDDDDDGV 238
Query: 239 QWQTDTSLEAAKQRIQEQLSSVTADMVMLSTTEEKKKSGKKSPDRESKGHENGASGPNTH 298
QW TDTSL+A++QRI+EQLS+VTADMVML+T E +KK KK+ ++ G +NG S
Sbjct: 239 QWLTDTSLDASRQRIKEQLSAVTADMVMLTTDEPEKK--KKAASNQNGGSQNGNSKNYGT 296
Query: 299 LADQMKDFLKKGASASQFKSFLGSLSGTPQEVMDALFVALFDGIEKGFAKEVTKKKNYLA 358
+ ++K LKKG AS+ S L +L QE M AL ALF+G EKGF +E KKKNY A
Sbjct: 297 VVAEVKANLKKGFGASELLSHLAALPVPAQEKMSALVEALFEGTEKGFGRETLKKKNYFA 356
Query: 359 AATQEEGSQMVLLHSLESFCGKARPAAVKEVALVLKALYDNDLLEEEFILDWYQKGLGGA 418
AA EEGSQ++LLH++E FC K A+KEVALVLK LYD D+LEEE I+ WYQKGL G
Sbjct: 357 AAVAEEGSQILLLHAIEEFCCKPNSNALKEVALVLKTLYDADVLEEEAIVLWYQKGLKGD 416
Query: 419 NKNSQVWKNAKPVIEWLQNAESETEED 445
NKNS++WKNA+P I+WLQNAESE++E+
Sbjct: 417 NKNSKIWKNAQPFIDWLQNAESESDEE 443
>sp|Q9C8F1|IF5Y_ARATH Probable eukaryotic translation initiation factor 5-1
OS=Arabidopsis thaliana GN=At1g36730 PE=2 SV=1
Length = 439
Score = 546 bits (1406), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/456 (66%), Positives = 355/456 (77%), Gaps = 28/456 (6%)
Query: 1 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFG 60
MALQNIGASN DDAFYRYKMP+M+TKIEGRGNGIKTNVVNMV+IAKAL RP +YTTKYFG
Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMMTKIEGRGNGIKTNVVNMVEIAKALGRPAAYTTKYFG 60
Query: 61 NELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVN 120
ELGAQSKFDEK GTSLVNGAHDT+KLAGLLENFIKKYVQCYGCGNPET+I+ITKTQM+
Sbjct: 61 CELGAQSKFDEKNGTSLVNGAHDTSKLAGLLENFIKKYVQCYGCGNPETEILITKTQMLQ 120
Query: 121 LKCAACGFVSEVDMRDKLTTFILKNPPVQKKTSKDKKSLRRAEKERLKEGEAADEELKKI 180
LKCAACGF+S+VDMRDKLT+FILKNPP QKK+SKDKKS+RRAEKERL+EGEAADEE++K+
Sbjct: 121 LKCAACGFLSDVDMRDKLTSFILKNPPEQKKSSKDKKSMRRAEKERLREGEAADEEMRKL 180
Query: 181 KKEAGKKKGSSANSKDVTAKGASTKKKAHSSDDDHSPSRSQADENEPAIDDADDDDDIQW 240
KKEA KK ++ T K S DHSP RS +DEN+ A D +DDDD+QW
Sbjct: 181 KKEAASKKKAATT---------GTSKDKVSKKKDHSPPRSLSDENDQA-DSEEDDDDVQW 230
Query: 241 QTDTSLEAAKQRIQEQLSSVTADMVMLSTTEEKKKSG--KKSPDRESKGHENGAS--GPN 296
QTDTS EAA++R++EQLS+VTA+MVMLST EEKK KK+P++ HENG S N
Sbjct: 231 QTDTSREAAEKRMKEQLSAVTAEMVMLSTVEEKKPVAEVKKAPEQ---VHENGNSKIPEN 287
Query: 297 TH--LADQMKDFLKKGASASQFKSFLGSLSGTPQEVMDALFVALFDGIEKGFAKEVTKKK 354
H L +++K+ L G+S +Q K+ L S S PQE MDALF ALF G KGFAKEV KKK
Sbjct: 288 AHEKLVNEIKELLSSGSSPTQLKTALASNSANPQEKMDALFSALFGGTGKGFAKEVIKKK 347
Query: 355 NYLAA--ATQEEG---SQMVLLHSLESFCGKARPAAVKEVALVLKALYDNDLLEEEFILD 409
YL A QEE +QM LL+ +ESFC KA A KEVALV+K LYD D+L+E+ I++
Sbjct: 348 KYLLALMMMQEEAGAPAQMGLLNGIESFCMKASAEAAKEVALVIKGLYDEDILDEDVIVE 407
Query: 410 WYQKGLGGANKNSQVWKNAKPVIEWLQNAESETEED 445
WY KG+ K+S V KN P IEWLQNAESE+EE+
Sbjct: 408 WYNKGV----KSSPVLKNVTPFIEWLQNAESESEEE 439
>sp|P55876|IF5_MAIZE Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2
SV=1
Length = 451
Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust.
Identities = 296/463 (63%), Positives = 344/463 (74%), Gaps = 32/463 (6%)
Query: 1 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFG 60
MALQNIGASN DDAFYRYKMP+MITKIEGRGNGIKTNVVNMVDIAKALARP SYTTKYFG
Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60
Query: 61 NELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVN 120
ELGAQSKFDEKTG SLVNGAHDTAKLAGLLE FIKKYVQCYGCGNPET+I+I+KTQM++
Sbjct: 61 CELGAQSKFDEKTGISLVNGAHDTAKLAGLLEVFIKKYVQCYGCGNPETEILISKTQMIS 120
Query: 121 LKCAACGFVSEVDMRDKLTTFILKNPPVQKKTSKDKKSLRRAEKERLKEGEAADEELKKI 180
LKCAACGFVS+VDMRDKLTTFILKNPP QKK KDKK++RRAEKERLKEGEAADEE
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGGKDKKAMRRAEKERLKEGEAADEE---- 176
Query: 181 KKEAGKKKGSSANSKDVTAKGASTKKKAHS---SDDDH--SPSRSQADENEPAIDDADDD 235
++ KK SKD TAKG KKKA + SD+DH SP+RS + DDD
Sbjct: 177 -QKKLKKDAKKKGSKDSTAKG--LKKKATTATGSDEDHSSSPTRSHDGDKA---AADDDD 230
Query: 236 DDIQWQTDTSLEAAKQRIQEQLSSVTADMVMLSTTEEKKKSGKKSPDRESKGHENGAS-- 293
DD+QWQTDTS+EAAKQR+QEQLS+ TA+MVMLST E +KK K P + G NG++
Sbjct: 231 DDVQWQTDTSIEAAKQRMQEQLSAATAEMVMLSTEETEKKM--KQPTHKD-GSTNGSAKE 287
Query: 294 -----------GPNTHLADQMKDFLKKGASASQFKSFLGSLSGTPQEVMDALFVALFDGI 342
P L +K L + SQ K+ L S + PQ+VM+A ALF G+
Sbjct: 288 IPNDKPAVTKPSPYEELIGDIKASLGSAPTPSQLKAVLASSTLPPQDVMNAPLEALFGGV 347
Query: 343 EKGFAKEVTKKKNYLAAATQEEGSQMVLLHSLESFCGKARPAAVKEVALVLKALYDNDLL 402
KGF KEV K K YLA A +EG+Q +L+ ++E+F GK P A+KEV +VLKALYD D+L
Sbjct: 348 GKGFTKEVVKNKKYLAVAVPDEGAQTLLVQAIEAFGGKCNPEALKEVPVVLKALYDGDIL 407
Query: 403 EEEFILDWYQKGLGGANKNSQVWKNAKPVIEWLQNAESETEED 445
+EE I+DWY + A K+SQV KNAKP +EWLQ+AES+ E D
Sbjct: 408 DEETIVDWYNDAV-AAGKDSQVVKNAKPFVEWLQSAESDEEGD 449
>sp|Q9VXK6|IF5_DROME Eukaryotic translation initiation factor 5 OS=Drosophila
melanogaster GN=eIF5 PE=1 SV=1
Length = 464
Score = 192 bits (487), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/458 (31%), Positives = 219/458 (47%), Gaps = 70/458 (15%)
Query: 1 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFG 60
MA N+ S +D FYRYKMP++ K+EG+GNGIKT +VNM ++A+A+ RP +Y TKYFG
Sbjct: 1 MATVNVNRSVTD-IFYRYKMPRLQAKVEGKGNGIKTVLVNMAEVARAIGRPATYPTKYFG 59
Query: 61 NELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIIT-KTQMV 119
ELGAQ+ FD K +VNG+HD KL LL+ FI+K+V C C NPET++ ++ K Q +
Sbjct: 60 CELGAQTLFDHKNERFVVNGSHDVNKLQDLLDGFIRKFVLCPECDNPETNLTVSAKNQTI 119
Query: 120 NLKCAACGFVSEVDMRDKLTTFILKNPPVQKKTSKDKKSLRRAEKERLKEGEAADEELKK 179
+ C ACGF + + K+ TFI+KNPP A+ L EG+ + +K
Sbjct: 120 SQSCKACGFHGLLKVNHKVNTFIVKNPPSLNPA---------AQGSSLTEGKRS----RK 166
Query: 180 IKKEAGKKKGSSANSKDVTAKGASTKKKAHSSDDDHSPSRSQADENEPAID------DAD 233
K++ GS N+ G + D +QA + E I A
Sbjct: 167 QKQKNDNADGSMTNNSLANNSGGES---------DGGNGTNQASQTEAEISAAIPEKTAK 217
Query: 234 DDDDIQWQTDTSLEAAKQRIQEQLSSVTADMVMLSTTEEKKKSGKKSPD---------RE 284
DDDD W D S EA + R+Q+ +T ++ +++ K+ K+ D R+
Sbjct: 218 DDDDEGWSVDVSKEAIRARLQD----LTDGAKGMTISDDYDKTEKERIDIFYELVKDKRD 273
Query: 285 SKGHENGASGPNTHLADQMKDFLKKGASASQFKSFLGSLSGTPQEVMDALFVALFDGIEK 344
K ++ + + + D + K P + + LF +
Sbjct: 274 KKQLDDVQTHKELVIEAERLDIINKA----------------PLVLAELLFT-------E 310
Query: 345 GFAKEVTKKKNYLAAAT-QEEGSQMVLLHSLESFCGKARPAAVKEVALVLKALYDNDLLE 403
K+V K + L T +Q L+ +E + + +VA + K YD D+L+
Sbjct: 311 NIIKDVQKNRPLLLRFTLNNPKAQRYLIGGVEQTVELHKGILMSKVAGIFKLFYDLDILD 370
Query: 404 EEFILDWYQ---KGLGGANKNSQVWKNAKPVIEWLQNA 438
E IL+W Q K N +++ + A P + WL+NA
Sbjct: 371 EAVILEWAQKVSKRHVSKNIAAEIHEKAMPFVLWLKNA 408
>sp|P59325|IF5_MOUSE Eukaryotic translation initiation factor 5 OS=Mus musculus GN=Eif5
PE=1 SV=1
Length = 429
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 104/144 (72%), Gaps = 2/144 (1%)
Query: 5 NIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELG 64
N+ S SD FYRYKMP++I K+EG+GNGIKT +VNMVD+AKAL RPP+Y TKYFG ELG
Sbjct: 4 NVNRSVSDQ-FYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELG 62
Query: 65 AQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIIT-KTQMVNLKC 123
AQ++FD K +VNG+H+ KL +L+ FIKK+V C C NPETD+ + K Q + C
Sbjct: 63 AQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNSC 122
Query: 124 AACGFVSEVDMRDKLTTFILKNPP 147
ACG+ +D KL TFILKNPP
Sbjct: 123 KACGYRGMLDTHHKLCTFILKNPP 146
>sp|Q07205|IF5_RAT Eukaryotic translation initiation factor 5 OS=Rattus norvegicus
GN=Eif5 PE=1 SV=1
Length = 429
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 104/144 (72%), Gaps = 2/144 (1%)
Query: 5 NIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELG 64
N+ S SD FYRYKMP++I K+EG+GNGIKT +VNMVD+AKAL RPP+Y TKYFG ELG
Sbjct: 4 NVNRSVSDQ-FYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELG 62
Query: 65 AQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIIT-KTQMVNLKC 123
AQ++FD K +VNG+H+ KL +L+ FIKK+V C C NPETD+ + K Q + C
Sbjct: 63 AQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNSC 122
Query: 124 AACGFVSEVDMRDKLTTFILKNPP 147
ACG+ +D KL TFILKNPP
Sbjct: 123 KACGYRGMLDTHHKLCTFILKNPP 146
>sp|Q22918|IF5_CAEEL Eukaryotic translation initiation factor 5 OS=Caenorhabditis
elegans GN=C37C3.2 PE=2 SV=2
Length = 436
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
Query: 13 DAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEK 72
D FYRYKMPK+ K+EG+GNGIKT + NM +IAKAL RPP Y TKYFG ELGAQ+ FD K
Sbjct: 11 DPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERPPMYPTKYFGCELGAQTNFDAK 70
Query: 73 TGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEV 132
+VNG HD KL +L+ FIKK+V C C NPET + + K + KC ACG ++
Sbjct: 71 NERYIVNGEHDANKLQDILDGFIKKFVLCKSCENPETQLFVRKNN-IKSKCKACGCSFDI 129
Query: 133 DMRDKLTTFILKNPP 147
D++ KL+TFI+KNPP
Sbjct: 130 DLKHKLSTFIMKNPP 144
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 348 KEVTKKKNYLAAAT-QEEGSQMVLLHSLESFCGKARPAAVKEVALVLKALYDNDLLEEEF 406
K+++K +N L T ++ +Q LL +E K + + A ++K+LYD D+ EE+
Sbjct: 278 KQISKHRNLLLRFTLNDKKAQRYLLGGVEQVIHKHEAELLSKSAHIIKSLYDEDVCEEDS 337
Query: 407 ILDWYQKGLGGANKNS---QVWKNAKPVIEWLQ 436
++ W +K S ++ +N++PV+ WL+
Sbjct: 338 LISWGEKPSSKYVSKSFAKKIIENSQPVLNWLK 370
>sp|Q09689|IF5_SCHPO Probable eukaryotic translation initiation factor 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC2F7.05c PE=3 SV=1
Length = 395
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 2/158 (1%)
Query: 1 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFG 60
MA NI + D+FYRY+MPK+ +KIEG+GNGIKT + NM DIAKAL RPP Y TK+FG
Sbjct: 1 MATINI-RRDVKDSFYRYRMPKLQSKIEGKGNGIKTVIPNMSDIAKALGRPPLYVTKFFG 59
Query: 61 NELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKT-QMV 119
ELGAQ+ +VNGAHD KL LL+ FI+++V C C NPET++ I K Q +
Sbjct: 60 FELGAQTTIIADMDRYIVNGAHDAGKLQDLLDVFIRRFVLCASCQNPETELSINKKDQTI 119
Query: 120 NLKCAACGFVSEVDMRDKLTTFILKNPPVQKKTSKDKK 157
+ C ACG+ +D R KLT I+KNPP +KK+ K K+
Sbjct: 120 SYDCKACGYRGVIDGRHKLTGVIVKNPPAKKKSHKHKR 157
>sp|P38431|IF5_YEAST Eukaryotic translation initiation factor 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF5 PE=1
SV=1
Length = 405
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/434 (30%), Positives = 199/434 (45%), Gaps = 48/434 (11%)
Query: 5 NIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELG 64
NI N D FYRYKMP + K+EGRGNGIKT V+N+ DI+ AL RP Y KYFG ELG
Sbjct: 4 NICRDNHD-PFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELG 62
Query: 65 AQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCA 124
AQ+ LVNG H+ AKL +L+ FI K+V C C NPET+IIITK + C
Sbjct: 63 AQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRDCK 122
Query: 125 ACGFVSEVDMRDKLTTFILKNPPVQKKTSKDKKSLRRAEKERLKEGEAADEELKKIKKEA 184
ACG + +D+R KL++FILKNPP + KK ++ G + ++ + K +
Sbjct: 123 ACGKRTPMDLRHKLSSFILKNPP-DSVSGSKKKKKAATASANVRGGGLSISDIAQGKSQN 181
Query: 185 GKKKGSSANSKDVTAKGASTKKKAHSSDDDHSPSRSQADENEPAIDDADDDDDIQWQTDT 244
G+ G+ST + H +D+ SR Q ++D + DD +W D
Sbjct: 182 APSDGT----------GSSTPQ--HHDEDEDELSR-QIKAAASTLEDIEVKDD-EWAVDM 227
Query: 245 SLEAAKQRIQEQLSSVTADMVMLSTTEEKKKSGKKSPDRESKGHENGASGPNTHLADQMK 304
S EA + R +E V +++ L + G+ ++ + EN S
Sbjct: 228 SEEAIRARAKEL--EVNSELTQLD------EYGEWILEQAGEDKENLPSD---------V 270
Query: 305 DFLKKGASASQFKSFLGSLSGTPQEVMDALFVALFDGIEKGFAKEVTKKKNYLAAATQEE 364
+ KK A ++ L LFD + E+ + +
Sbjct: 271 ELYKKAAELDVLND---------PKIGCVLAQCLFD---EDIVNEIAEHNAFFTKILVTP 318
Query: 365 GSQMVLLHSLESFCGKARPAAVKEVALVLKALYDNDLLEEEFILDWYQKG---LGGANKN 421
+ + +E F G + + +L LY+ND++ EE I+ + K +
Sbjct: 319 EYEKNFMGGIERFLGLEHKDLIPLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVS 378
Query: 422 SQVWKNAKPVIEWL 435
+V + AKP I WL
Sbjct: 379 KKVRRAAKPFITWL 392
>sp|Q54LA1|IF5_DICDI Eukaryotic translation initiation factor 5 OS=Dictyostelium
discoideum GN=eif5 PE=3 SV=1
Length = 393
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 100/157 (63%), Gaps = 6/157 (3%)
Query: 1 MALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFG 60
MA NI + +D FYRYKM + K+EG+GNGIKT +VN+ +IA+ L R P Y TK+F
Sbjct: 1 MAQVNI-RRDVEDQFYRYKMEVLQGKVEGKGNGIKTVIVNLPNIARDLDRQPEYITKFFE 59
Query: 61 NELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVN 120
E A+S + + + +NG + +LA L+ FI K+V C C NPET +I K ++
Sbjct: 60 IEFNAKSNIENEKYS--INGQYTVERLASALDKFISKFVLCSFCKNPETKFVIKKG-VIE 116
Query: 121 LKCAACGFVSEVDMRDKLTTFILKNPP--VQKKTSKD 155
KCAACG V +DM+ KLT++I+KNPP V K++ D
Sbjct: 117 FKCAACGRVGPIDMKHKLTSYIVKNPPKAVSTKSTHD 153
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 238 IQWQTDTSLEAAKQRIQEQLS-SVTADMVMLSTTEEKKKSGKKSPD----------RESK 286
+ W TDTS +AA++R ++ + S +A + M++ + +S K+ D +ES
Sbjct: 181 VVWFTDTSEKAAEERKKKAIGDSTSAVISMMADISVEPQSAKEEQDEDDEQEEGQEKESD 240
Query: 287 GHENGASGPNTHLADQMKDFLKKGASASQFKSFLGSLSGTPQEVMDALF-----VALFDG 341
+ +S T+ ADQ + ++K S + F S T + ++AL F
Sbjct: 241 PVSSISSFLETNPADQ--ELMEKLDSVQE--EFGLRSSATSKAAIEALCKNAENTIKFVK 296
Query: 342 IEKGFAKEVTKKKNYLAAATQEEGSQMVLLHSLESFCGKARPAAVKEVALVLKALYDNDL 401
+ K+++K+++ ++ +L E C K +K + +LK L+D +
Sbjct: 297 TQTALLKKISKRRD----------GKLGILLGFEELCVKDE-TLLKSIQGILKNLFDAGI 345
Query: 402 LEEEFILDWYQKGLGGANKNSQVWKNAKPVIEWLQNA 438
L EE IL WY + K+ V K K I WL+ A
Sbjct: 346 LTEENILKWYHQ----KAKSKVVIKACKDFIAWLETA 378
>sp|Q26891|IF5_TRICA Eukaryotic translation initiation factor 5 (Fragment) OS=Tribolium
castaneum PE=2 SV=1
Length = 162
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 37/188 (19%)
Query: 90 LLENFIKKYVQCYGCGNPETDIII-TKTQMVNLKCAACGFVSEVDMRDKLTTFILKNPPV 148
LL+ FI+K+V C C NPET++++ TK ++ C ACG+ S ++ KL TFILKNPP
Sbjct: 2 LLDGFIRKFVLCPECENPETELLVSTKRSTISQGCKACGYHSPLESNHKLVTFILKNPP- 60
Query: 149 QKKTSKDKKSLRRA-EKERLKEGEAADEELKKIKKEAGKKKGSSANSKDVTAKGASTKKK 207
+L A + L EG+ + K+ K+ G G ++
Sbjct: 61 ---------NLNPAVQGSSLTEGKRS----KRSKRPNGDTNGDTS--------------- 92
Query: 208 AHSSDDDHSPSRSQADENEPAIDDADDDDDIQWQTDTSLEAAKQRIQEQLSSVTADMVML 267
DD + + +EN + DDD+ +WQ D S EA + R+Q+ L+ +M +
Sbjct: 93 --QVDDQNESLEASVNENS---KNGDDDEGHEWQADVSEEAVRARMQD-LTEGAKNMTIN 146
Query: 268 STTEEKKK 275
E+++K
Sbjct: 147 DDLEKREK 154
>sp|Q8TWR5|IF2B_METKA Translation initiation factor 2 subunit beta OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=eif2b PE=3 SV=1
Length = 138
Score = 67.0 bits (162), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R++MPK +EG+ I+ N +I+K L R P + TKYF ELG D G
Sbjct: 26 RFEMPKPKVSVEGKTTVIR----NFKEISKKLDRDPEHITKYFLKELGTAGHVD--GGRL 79
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEV 132
+++G + + L+N+++++V C CG P+T ++ Q + LKC ACG S V
Sbjct: 80 ILHGVYHPKLVEEELKNYVEEFVLCPECGKPDTKLVREDRQWI-LKCEACGAWSSV 134
>sp|P41375|IF2B_DROME Eukaryotic translation initiation factor 2 subunit 2 OS=Drosophila
melanogaster GN=eIF-2beta PE=1 SV=1
Length = 312
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 35 KTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENF 94
KT+ N +DIAK L R P + + ELG D ++ G ++ +L +
Sbjct: 195 KTSFANFMDIAKTLHRLPKHLLDFLLAELGTSGSMDGNQQL-IIKGRFQPKQIENVLRRY 253
Query: 95 IKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
IK+YV C+ C +PET I+ T++ L+C +CG
Sbjct: 254 IKEYVTCHTCRSPET-ILQKDTRLFFLQCESCG 285
>sp|A5UKI8|IF2B_METS3 Translation initiation factor 2 subunit beta OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=eif2b PE=3
SV=1
Length = 135
Score = 62.4 bits (150), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+K+PK + I+G +T + N D+A+ L R P + K+ ELG + +
Sbjct: 24 RFKIPKAYSDIQGN----RTFIKNFKDVAEDLNRDPQHVLKFLLRELGTAGNLE--GSRA 77
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ G + LE++++KYV C+ C P+T II + ++ LKCAACG
Sbjct: 78 ILQGKFTHYLINERLEDYVEKYVICHECNRPDTK-IIREDRIFILKCAACG 127
>sp|Q41969|IF2B_ARATH Eukaryotic translation initiation factor 2 subunit beta
OS=Arabidopsis thaliana GN=EMB1401 PE=2 SV=3
Length = 268
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 35 KTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENF 94
KT VN +D+ K + R P + +Y ELG D + +V G G+L +
Sbjct: 157 KTVFVNFMDLCKTMHRQPDHVMQYLLAELGTSGSLDGQQRL-VVKGRFAPKNFEGILRRY 215
Query: 95 IKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
I YV C GC +P+T I+ + ++ L+C CG
Sbjct: 216 ITDYVICLGCKSPDT-ILSKENRLFFLRCEKCG 247
>sp|A2SSW2|IF2B_METLZ Translation initiation factor 2 subunit beta OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=eif2b
PE=3 SV=1
Length = 204
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVV-NMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGT 75
R+ MPK IEG KT V+ N DI +L R + K+ ELG K D
Sbjct: 25 RFVMPKAKIYIEG-----KTTVLENFSDIVDSLNRDKDHFMKFILGELGTAGKID--GNR 77
Query: 76 SLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ NG + A+ +LE ++ YV C CG P+T ++ +++ L C ACG
Sbjct: 78 AVFNGKFEQAQFDAILETYVGDYVICSECGRPDTK-LVKDDRVLMLLCEACG 128
>sp|O58312|IF2B_PYRHO Translation initiation factor 2 subunit beta OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=eif2b PE=3 SV=1
Length = 140
Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P + IEG KT + N DIA+AL R P + K+ E+ + K
Sbjct: 29 RFEVPGALVTIEGN----KTIIENFKDIAEALNRDPQHLLKFLLREIATAGTLEGKR--V 82
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ G +A L+ +IK+YV C CG+P+T II + + LKC ACG
Sbjct: 83 VLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTK-IIKRDRFYFLKCEACG 132
>sp|C5A2A8|IF2B_THEGJ Translation initiation factor 2 subunit beta OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=eif2b PE=3 SV=1
Length = 142
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P + I G +T + N VDIA+A+ R PS+ K+ E+ + +
Sbjct: 31 RFEVPPAVVTIAGN----RTIIENFVDIAEAMNRDPSHLLKFILREVATAGTLEGRR--V 84
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ G +A L+ ++K+YV C CG+P+T II + + LKC ACG
Sbjct: 85 ILQGRFTPYLIANKLKKYLKEYVICPVCGSPDTK-IIKRDRFYFLKCEACG 134
>sp|Q99L45|IF2B_MOUSE Eukaryotic translation initiation factor 2 subunit 2 OS=Mus
musculus GN=Eif2s2 PE=1 SV=1
Length = 331
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 35 KTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENF 94
KT+ VN DI K L R P + + ELG D ++ G ++ +L +
Sbjct: 214 KTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSID-GNNQLVIKGRFQQKQIENVLRRY 272
Query: 95 IKKYVQCYGCGNPETDIIITKTQMVNLKCAAC 126
IK+YV C+ C +P+T I+ T++ L+C C
Sbjct: 273 IKEYVTCHTCRSPDT-ILQKDTRLYFLQCETC 303
>sp|Q9UYR6|IF2B_PYRAB Translation initiation factor 2 subunit beta OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=eif2b PE=3 SV=1
Length = 140
Score = 59.7 bits (143), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P + IEG KT + N DIA+AL R P + K+ E+ + K
Sbjct: 29 RFEVPGALVTIEGN----KTIIENFKDIAEALNRDPQHLLKFLLREIATAGTLEGKR--V 82
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ G +A ++ +IK+YV C CG+P+T II + + LKC ACG
Sbjct: 83 VLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTK-IIKRDRFYFLKCEACG 132
>sp|Q5E9D0|IF2B_BOVIN Eukaryotic translation initiation factor 2 subunit 2 OS=Bos taurus
GN=EIF2S2 PE=2 SV=1
Length = 333
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 35 KTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENF 94
KT+ VN DI K L R P + + ELG D ++ G ++ +L +
Sbjct: 216 KTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSID-GNNQLVIKGRFQQKQIENVLRRY 274
Query: 95 IKKYVQCYGCGNPETDIIITKTQMVNLKCAAC 126
IK+YV C+ C +P+T I+ T++ L+C C
Sbjct: 275 IKEYVTCHTCRSPDT-ILQKDTRLYFLQCETC 305
>sp|P41035|IF2B_RABIT Eukaryotic translation initiation factor 2 subunit 2 OS=Oryctolagus
cuniculus GN=EIF2S2 PE=1 SV=1
Length = 333
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 35 KTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENF 94
KT+ VN DI K L R P + + ELG D ++ G ++ +L +
Sbjct: 216 KTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSID-GNNQLVIKGRFQQKQIENVLRRY 274
Query: 95 IKKYVQCYGCGNPETDIIITKTQMVNLKCAAC 126
IK+YV C+ C +P+T I+ T++ L+C C
Sbjct: 275 IKEYVTCHTCRSPDT-ILQKDTRLYFLQCETC 305
>sp|Q5R4T9|IF2B_PONAB Eukaryotic translation initiation factor 2 subunit 2 OS=Pongo
abelii GN=EIF2S2 PE=2 SV=1
Length = 333
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 35 KTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENF 94
KT+ VN DI K L R P + + ELG D ++ G ++ +L +
Sbjct: 216 KTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSID-GNNQLVIKGRFQQKQIENVLRRY 274
Query: 95 IKKYVQCYGCGNPETDIIITKTQMVNLKCAAC 126
IK+YV C+ C +P+T I+ T++ L+C C
Sbjct: 275 IKEYVTCHTCRSPDT-ILQKDTRLYFLQCETC 305
>sp|P20042|IF2B_HUMAN Eukaryotic translation initiation factor 2 subunit 2 OS=Homo
sapiens GN=EIF2S2 PE=1 SV=2
Length = 333
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 35 KTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENF 94
KT+ VN DI K L R P + + ELG D ++ G ++ +L +
Sbjct: 216 KTSFVNFTDICKLLHRQPKHLLAFLLAELGTSGSID-GNNQLVIKGRFQQKQIENVLRRY 274
Query: 95 IKKYVQCYGCGNPETDIIITKTQMVNLKCAAC 126
IK+YV C+ C +P+T I+ T++ L+C C
Sbjct: 275 IKEYVTCHTCRSPDT-ILQKDTRLYFLQCETC 305
>sp|Q8PWV1|IF2B_METMA Translation initiation factor 2 subunit beta OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=eif2b PE=3 SV=1
Length = 202
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 2 ALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVV-NMVDIAKALARPPSYTTKYFG 60
A+ + + + DA + PK+ + EG KT ++ N +IA L R P + KY
Sbjct: 11 AMSKMPDTETTDARFVIPEPKLFS--EG-----KTTILDNFGNIADTLNRDPDHLMKYLT 63
Query: 61 NELGAQSKFDEKTGT-SLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMV 119
ELG K + GT ++ G A+L+ ++ ++ +YV C CG P+T ++ +V
Sbjct: 64 RELGTAGKIE---GTRAVFQGRFTRAQLSDNIQAYVDEYVMCSECGRPDTQLVRVDRVLV 120
Query: 120 NLKCAACG 127
LKC+ACG
Sbjct: 121 -LKCSACG 127
>sp|Q8U3I5|IF2B_PYRFU Translation initiation factor 2 subunit beta OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=eif2b
PE=1 SV=1
Length = 140
Score = 58.5 bits (140), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P + IEG KT + N DIA AL R P + K+ E+ + +
Sbjct: 29 RFEVPGALVTIEGN----KTIIENFKDIADALNRDPQHLLKFLLREIATAGTLEGRR--V 82
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ G +A L+ +IK+YV C CG+P+T II + + LKC ACG
Sbjct: 83 VLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTK-IIKRDRFHFLKCEACG 132
>sp|A1RX59|IF2B_THEPD Translation initiation factor 2 subunit beta OS=Thermofilum pendens
(strain Hrk 5) GN=eif2b PE=3 SV=1
Length = 141
Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+ +P E G K + N D+A+ L R P ++ E+ ++ GT+
Sbjct: 30 RFVLPTF----EVSKTGKKVYIHNFKDVAEKLNREPPVLLRFILKEIALPGVYE--NGTA 83
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEV 132
+++G L LLE F +YV+C C P+T I++ + +++ +KC ACG VS V
Sbjct: 84 VIHGEVSAQTLNKLLERFYNEYVKCPVCEAPDT-ILVKEKKLMYIKCTACGAVSPV 138
>sp|A6UX55|IF2B_META3 Translation initiation factor 2 subunit beta OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=eif2b PE=3
SV=1
Length = 139
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P + +EG +T V N VDI+K + R P + KY ELG D +
Sbjct: 28 RFEVPHADSFVEGN----RTMVKNFVDISKVIRREPQFFAKYVLKELGTAG--DVEGPRL 81
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEVDM 134
++ G + ++ F+ +YV C CG P+T II + ++ LKC ACG + + +
Sbjct: 82 ILQGKFGNYIINSKIKKFVDEYVLCPECGKPDTK-IIKEGRIHFLKCMACGAMKPIKL 138
>sp|Q8TU91|IF2B_METAC Translation initiation factor 2 subunit beta OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=eif2b PE=3 SV=1
Length = 202
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 21/147 (14%)
Query: 2 ALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVV-NMVDIAKALARPPSYTTKYFG 60
A+ + + + DA + PK+ + EG KT ++ N +IA L R P + KY
Sbjct: 11 AMAKMPDTETTDARFVIPEPKLFS--EG-----KTTILDNFGNIADTLNRDPDHLMKYLT 63
Query: 61 NELGAQSKFDEKTGT-SLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMV 119
ELG K + GT ++ G A+++ ++ ++ +YV C CG P+T ++ +V
Sbjct: 64 RELGTAGKIE---GTRAVFQGRFTRAQISDNIQAYVDEYVMCSECGRPDTQLVRVDRVLV 120
Query: 120 NLKCAACGF--------VSEVDMRDKL 138
LKC+ACG VS V +RD +
Sbjct: 121 -LKCSACGAHRPVKKRKVSNVVVRDAI 146
>sp|A7I5J0|IF2B_METB6 Translation initiation factor 2 subunit beta OS=Methanoregula
boonei (strain 6A8) GN=eif2b PE=3 SV=1
Length = 204
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVV-NMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGT 75
R+ +P+ +EG KT ++ N +IA + R + KY ELG K +
Sbjct: 25 RFVVPEAKAYVEG-----KTTILENFAEIADTVRRDKDHLMKYMLGELGTSGKIE--GNR 77
Query: 76 SLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEVDMR 135
++ NG + +++ ++++++ YV C CG P+T ++ +++ L+C ACG
Sbjct: 78 AIFNGKFEISQIRMIIKSYVDDYVICSECGKPDTR-LVKDDRVLLLRCDACG-------- 128
Query: 136 DKLTTFILKNPPVQKKTSKDKKSLRRAEKERLKEGEAADEELKKIKK 182
+ PV+K+ ++ + + E L+EG+ D E++ + K
Sbjct: 129 --------GHRPVRKRKARTEPA-----SENLEEGQVLDVEIQSLSK 162
>sp|O27797|IF2B_METTH Translation initiation factor 2 subunit beta OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=eif2b PE=1 SV=1
Length = 135
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++PK + I+G +T + N ++A AL R P + K+ ELG + G +
Sbjct: 24 RFEVPKAYSVIQGN----RTFIQNFREVADALNRDPQHLLKFLLRELGTAGNLE--GGRA 77
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ G + +E+++ K+V C+ C P+T II + ++ LKC ACG
Sbjct: 78 ILQGKFTHFLINERIEDYVNKFVICHECNRPDTR-IIREGRISLLKCEACG 127
>sp|O24473|IF2B_WHEAT Eukaryotic translation initiation factor 2 subunit beta OS=Triticum
aestivum PE=1 SV=1
Length = 270
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 35 KTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENF 94
KT VN +D+ K + R P + + E+G D + ++ G +L +
Sbjct: 157 KTVFVNFMDLCKTMHRQPEHVMMFLLAEMGTSGSLDGQQ-RLVIKGRFAPKNFEAILRRY 215
Query: 95 IKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
I +YV C+GC +P+T I+ + ++ L+C CG
Sbjct: 216 INEYVICHGCKSPDT-ILSKENRLFFLRCEQCG 247
>sp|Q9YBR6|IF2B_AERPE Translation initiation factor 2 subunit beta OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=eif2b PE=3 SV=3
Length = 148
Score = 56.2 bits (134), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 16 YRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGT 75
YR P++I G +T + N +IA+AL R P +Y EL + ++E++G
Sbjct: 36 YRIPEPQIIRI------GSQTVIRNFREIAQALKRDPKLVARYLQKELATAASYEEESGQ 89
Query: 76 SLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++N + L+ F+K YV+C CG+ +T ++ + + LKC ACG
Sbjct: 90 LILNVKVSRKVVNQFLQLFMKTYVRCPTCGSIDTK-LLRQERAYMLKCEACG 140
>sp|P55871|IF2B_MALDO Eukaryotic translation initiation factor 2 subunit beta OS=Malus
domestica PE=2 SV=2
Length = 271
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 35 KTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENF 94
K VN +D+ K + R P + + ELG D + +V G G+L +
Sbjct: 158 KAVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQ-RLVVKGRFAPKNFEGILRRY 216
Query: 95 IKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
+ +YV C GC +P+T I+ + ++ L+C CG
Sbjct: 217 VNEYVICLGCQSPDT-ILSKENRLFFLRCEKCG 248
>sp|A3DNI8|IF2B_STAMF Translation initiation factor 2 subunit beta OS=Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eif2b
PE=3 SV=1
Length = 142
Score = 55.8 bits (133), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 33 GIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLVNGAHDTAKLAGLLE 92
G KT ++N I + R P +YF ELG + +E +G ++ G + + L++
Sbjct: 42 GGKTLILNFKQITDVINRDPKILQRYFVKELGVPAYMNE-SGQLILQGRFSSHVINRLID 100
Query: 93 NFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
F+KKYV C CG+ T +I K ++ LKC ACG
Sbjct: 101 LFVKKYVICPTCGSRFTK-LIKKGKVFILKCEACG 134
>sp|Q5JIT0|IF2B_PYRKO Translation initiation factor 2 subunit beta OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=eif2b PE=3 SV=1
Length = 142
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P I G +T + N VDIA+A+ R P++ K+ E+ + + +
Sbjct: 31 RFEVPPAQVTIAGN----RTIIENFVDIAEAMNRDPNHLLKFILREVATAGTLEGRR--A 84
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ G +A ++ ++K++V C CG+P+T II K + LKC ACG
Sbjct: 85 ILQGRFTPYLIANKMKKYLKEFVICPVCGSPDTK-IIKKGRFHFLKCEACG 134
>sp|Q2NHD9|IF2B_METST Translation initiation factor 2 subunit beta OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=eif2b PE=3 SV=1
Length = 142
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+K+PK + I+G +T + N D+++ L R P + KY ELG + +
Sbjct: 31 RFKVPKGYSVIQGN----RTIIKNFGDVSRTLNRDPQHVLKYLLRELGTSGNVE--GNRA 84
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ G + ++ ++ +V C+ C P+T +II + ++ LKC+ACG
Sbjct: 85 ILQGKFTHYVINDRVKEYVDNFVMCHECNRPDT-VIIREDRIDMLKCSACG 134
>sp|P56329|IF2B_SCHPO Probable eukaryotic translation initiation factor 2 subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif212 PE=1 SV=2
Length = 321
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 33 GIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS--LVNGAHDTAKLAGL 90
G KT N+ DI+K + R + ++ ELG D G+S ++ G ++ +
Sbjct: 206 GKKTIFANISDISKRMHRSLDHVIQFLFAELGTSGSVD---GSSRLIIKGRFQQKQIENV 262
Query: 91 LENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEV 132
L +I +YV C C +P+T I+ + ++ + C ACG V V
Sbjct: 263 LRRYIVEYVTCKTCKSPDT-ILTKENRIFFMTCEACGSVRSV 303
>sp|Q57562|IF2B_METJA Translation initiation factor 2 subunit beta OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=eif2b PE=1 SV=1
Length = 143
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P++ IEG +T + N ++AKA+ R + KY E G+ + G
Sbjct: 32 RFELPEIEILIEGN----RTIIRNFRELAKAVNRDEEFFAKYLLKETGSAGNLE--GGRL 85
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEVDM 134
++ L + +F+++YV C CG P+T II + ++ LKC ACG + + M
Sbjct: 86 ILQRRISPELLKSRINDFLREYVICRECGKPDTK-IIKEGRVHLLKCMACGAIRPIRM 142
>sp|A3CXJ3|IF2B_METMJ Translation initiation factor 2 subunit beta OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=eif2b
PE=3 SV=1
Length = 205
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVV-NMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGT 75
R+ +P IEG KT V+ N +IA L R + K+ ELG K + GT
Sbjct: 25 RFTVPTARAFIEG-----KTTVLENFAEIASTLRREQDHLMKHLLGELGTAGKVE---GT 76
Query: 76 -SLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ +G + ++ +++ ++ YV C CG P+T ++ T+ +++ LKC ACG
Sbjct: 77 RAVFSGKFEQEQINTIIKGYVDDYVICSECGKPDTRLVKTE-RVLTLKCDACG 128
>sp|A6VIT7|IF2B_METM7 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=eif2b PE=3
SV=1
Length = 138
Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P + +EG +T + N DIAK + R P KY ELG + G
Sbjct: 27 RFEIPSADSFVEGN----RTIIKNFKDIAKFMERDPQEFAKYVMKELGTAGDME---GVR 79
Query: 77 LV-NGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEV 132
L+ G + ++N++ +YV C CG P+T I+ + ++ LKC ACG + V
Sbjct: 80 LILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTK-IVKEGRIHFLKCTACGAMKPV 135
>sp|A9A7T1|IF2B_METM6 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=eif2b PE=3
SV=1
Length = 138
Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P + +EG +T + N DIAK + R P KY ELG + G
Sbjct: 27 RFEIPSADSFVEGN----RTIIKNFKDIAKFMERDPQEFAKYVMKELGTAGDME---GVR 79
Query: 77 LV-NGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEV 132
L+ G + ++N++ +YV C CG P+T I+ + ++ LKC ACG + V
Sbjct: 80 LILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTK-IVKEGRIHFLKCTACGAMKPV 135
>sp|Q6M0H3|IF2B_METMP Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain S2 / LL) GN=eif2b PE=3 SV=1
Length = 138
Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P + +EG +T + N DIAK + R P KY ELG + G
Sbjct: 27 RFEIPSADSFVEGN----RTIIKNFKDIAKFMERDPQEFAKYVMKELGTAGDME---GVR 79
Query: 77 LV-NGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEV 132
L+ G + ++N++ +YV C CG P+T I+ + ++ LKC ACG + V
Sbjct: 80 LILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTK-IVKEGRIHFLKCTACGAMKPV 135
>sp|P55010|IF5_HUMAN Eukaryotic translation initiation factor 5 OS=Homo sapiens GN=EIF5
PE=1 SV=2
Length = 431
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 353 KKNYLAAATQEEGSQMVLLHSLESFCGKARPAAVKEVALVLKALYDNDLLEEEFILDWYQ 412
++++L + +Q LLH LE + + ++ +LK +YD DLLEEE I+ W +
Sbjct: 297 RRHFLRFCHNNKKAQRYLLHGLECVVAMHQAQLISKIPHILKEMYDADLLEEEVIISWSE 356
Query: 413 KG---LGGANKNSQVWKNAKPVIEWLQNA 438
K ++ A+P I+WL+ A
Sbjct: 357 KASKKYVSKELAKEIRVKAEPFIKWLKEA 385
>sp|Q5R4L0|IF5_PONAB Eukaryotic translation initiation factor 5 OS=Pongo abelii GN=EIF5
PE=2 SV=1
Length = 431
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 353 KKNYLAAATQEEGSQMVLLHSLESFCGKARPAAVKEVALVLKALYDNDLLEEEFILDWYQ 412
++++L + +Q LLH LE + + ++ +LK +YD DLLEEE I+ W +
Sbjct: 297 RRHFLRFCHNNKKAQRYLLHGLECVVAMHQAQLISKIPHILKEMYDADLLEEEVIISWSE 356
Query: 413 KG---LGGANKNSQVWKNAKPVIEWLQNA 438
K ++ A+P I+WL+ A
Sbjct: 357 KASKKYVSKELAKEIRVKAEPFIKWLKEA 385
>sp|Q21230|IF2B_CAEEL Eukaryotic translation initiation factor 2 subunit 2
OS=Caenorhabditis elegans GN=K04G2.1 PE=3 SV=4
Length = 250
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 16 YRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGT 75
+ K+P++ R KT N ++I + + R + ++ ELG D +
Sbjct: 114 FAIKLPEV-----ARAGSKKTAFSNFLEICRLMKRQDKHVLQFLLAELGTTGSID-GSNC 167
Query: 76 SLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITK-TQMVNLKCAACG 127
+V G + +L +IK+YV C+ C +PET +TK T++ L+C CG
Sbjct: 168 LIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQ--LTKDTRLFFLQCTNCG 218
>sp|O27958|IF2B_ARCFU Translation initiation factor 2 subunit beta OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=eif2b PE=3 SV=1
Length = 137
Score = 50.8 bits (120), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P++ + EG +T + N IAK L R + KY LG D G
Sbjct: 26 RFEIPRVSIQREG----ARTILKNFSQIAKTLNRSEDHLYKYIVKSLGTAGFID--NGRL 79
Query: 77 LVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACG 127
++ G ++L ++++++ YV C C +P+T+ I + +++ L+C ACG
Sbjct: 80 VLQGKFTESELQKEVDDYVRLYVLCRECNSPDTE-FIKEERVLMLRCLACG 129
>sp|A4FZP0|IF2B_METM5 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=eif2b PE=3
SV=1
Length = 138
Score = 49.7 bits (117), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 17 RYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTS 76
R+++P + +EG +T + N DIAK + R KY ELG + G
Sbjct: 27 RFEIPSADSFVEGN----RTIIKNFKDIAKFMERDAQEFAKYVMKELGTAGDIE---GVR 79
Query: 77 LV-NGAHDTAKLAGLLENFIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEV 132
L+ G + ++N++ +YV C CG P+T I+ + ++ LKC ACG + V
Sbjct: 80 LILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTK-IVKEGRIHFLKCTACGAMKPV 135
>sp|Q74M98|IF2B_NANEQ Translation initiation factor 2 subunit beta OS=Nanoarchaeum
equitans (strain Kin4-M) GN=eif2b PE=3 SV=1
Length = 139
Score = 49.3 bits (116), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 35 KTNVVNMVDIAKALARPPSYTTKYFGNELGAQSKFDEKTGTSLV-NGAHDTAKLAGLLEN 93
+T + N IA L R P K+F EL Q+ + G SL+ N + L+
Sbjct: 40 RTIITNFKQIANYLNRDPKIIAKFFSKELFVQTIIE---GNSLIINKRVSYETIKKKLDE 96
Query: 94 FIKKYVQCYGCGNPETDIIITKTQMVNLKCAACGFVSEVD 133
FI +V C C P+T++I ++ +KC ACG S V+
Sbjct: 97 FINIFVICPVCKRPDTELIERGRKIYYIKCHACGSESPVN 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.126 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,184,855
Number of Sequences: 539616
Number of extensions: 7027724
Number of successful extensions: 47007
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 1450
Number of HSP's that attempted gapping in prelim test: 34694
Number of HSP's gapped (non-prelim): 9304
length of query: 445
length of database: 191,569,459
effective HSP length: 121
effective length of query: 324
effective length of database: 126,275,923
effective search space: 40913399052
effective search space used: 40913399052
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)