Query 013312
Match_columns 445
No_of_seqs 495 out of 1331
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 02:34:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013312.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013312hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.1E-38 2.4E-43 285.5 39.7 372 7-433 12-389 (394)
2 PRK03545 putative arabinose tr 100.0 1E-37 2.2E-42 293.5 40.1 367 9-432 10-382 (390)
3 PRK11551 putative 3-hydroxyphe 100.0 2.2E-36 4.7E-41 286.5 39.4 377 9-431 16-397 (406)
4 PRK11663 regulatory protein Uh 100.0 3.7E-36 8.1E-41 286.3 37.4 392 10-434 25-428 (434)
5 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.4E-36 3.1E-41 286.8 33.8 376 7-398 7-396 (412)
6 COG2271 UhpC Sugar phosphate p 100.0 1.2E-36 2.5E-41 268.4 30.5 378 7-413 24-418 (448)
7 PRK09705 cynX putative cyanate 100.0 6.1E-36 1.3E-40 281.1 36.6 355 25-435 26-386 (393)
8 TIGR00900 2A0121 H+ Antiporter 100.0 6.8E-36 1.5E-40 279.2 36.0 351 11-398 2-364 (365)
9 PRK11646 multidrug resistance 100.0 1.3E-35 2.9E-40 279.0 38.1 370 11-428 13-386 (400)
10 PRK09556 uhpT sugar phosphate 100.0 2E-36 4.4E-41 290.8 32.6 393 13-429 34-448 (467)
11 PRK10642 proline/glycine betai 100.0 5.5E-35 1.2E-39 282.3 42.5 366 7-398 15-405 (490)
12 PRK14995 methyl viologen resis 100.0 9.7E-36 2.1E-40 287.7 37.1 379 5-398 3-414 (495)
13 PRK10489 enterobactin exporter 100.0 2.9E-35 6.3E-40 279.4 37.4 376 7-431 16-401 (417)
14 PRK03633 putative MFS family t 100.0 5.4E-35 1.2E-39 274.0 38.6 370 3-431 1-373 (381)
15 TIGR01299 synapt_SV2 synaptic 100.0 3.1E-35 6.8E-40 289.0 37.0 395 12-430 171-734 (742)
16 PRK10213 nepI ribonucleoside t 100.0 2.2E-34 4.8E-39 270.2 41.1 335 15-398 27-367 (394)
17 PRK05122 major facilitator sup 100.0 6.6E-35 1.4E-39 275.6 37.7 372 5-434 12-393 (399)
18 TIGR00893 2A0114 d-galactonate 100.0 1.5E-35 3.2E-40 280.2 32.2 380 18-426 4-395 (399)
19 PRK09952 shikimate transporter 100.0 6.7E-34 1.4E-38 270.8 41.2 388 6-431 20-434 (438)
20 PRK09874 drug efflux system pr 100.0 4.6E-34 1E-38 270.9 40.0 381 5-431 11-399 (408)
21 TIGR00891 2A0112 putative sial 100.0 6.6E-35 1.4E-39 276.6 33.7 372 7-398 11-391 (405)
22 PRK10091 MFS transport protein 100.0 4.3E-34 9.4E-39 267.9 38.7 342 8-398 3-351 (382)
23 PRK10406 alpha-ketoglutarate t 100.0 1.1E-33 2.5E-38 269.2 41.7 378 10-431 24-425 (432)
24 PRK11195 lysophospholipid tran 100.0 2.9E-34 6.2E-39 269.4 37.0 347 8-395 3-354 (393)
25 TIGR00903 2A0129 major facilit 100.0 2.9E-34 6.3E-39 265.4 36.4 352 19-427 2-362 (368)
26 PRK12307 putative sialic acid 100.0 2.6E-34 5.6E-39 274.1 37.0 358 7-398 17-384 (426)
27 PRK11273 glpT sn-glycerol-3-ph 100.0 9E-34 2E-38 271.4 40.1 363 47-430 59-435 (452)
28 PRK15402 multidrug efflux syst 100.0 9.9E-34 2.1E-38 268.1 40.0 343 14-398 19-371 (406)
29 PRK10504 putative transporter; 100.0 1.4E-33 3E-38 272.3 40.9 376 7-398 9-416 (471)
30 PRK12382 putative transporter; 100.0 8.6E-34 1.9E-38 267.3 37.4 364 5-429 12-388 (392)
31 TIGR00899 2A0120 sugar efflux 100.0 9E-34 2E-38 265.9 37.3 363 14-429 3-373 (375)
32 PRK10077 xylE D-xylose transpo 100.0 6.6E-35 1.4E-39 282.5 29.9 411 9-434 13-461 (479)
33 TIGR00890 2A0111 Oxalate/Forma 100.0 3.1E-34 6.7E-39 269.2 33.5 349 24-422 19-374 (377)
34 TIGR00711 efflux_EmrB drug res 100.0 4.1E-34 8.9E-39 277.5 34.9 374 9-397 3-410 (485)
35 PRK10054 putative transporter; 100.0 8.4E-34 1.8E-38 266.4 35.4 353 1-398 1-360 (395)
36 PRK03699 putative transporter; 100.0 1.6E-33 3.4E-38 265.3 37.3 347 5-398 4-356 (394)
37 PF07690 MFS_1: Major Facilita 100.0 7.9E-35 1.7E-39 270.7 28.0 343 13-388 1-352 (352)
38 TIGR00710 efflux_Bcr_CflA drug 100.0 7.3E-33 1.6E-37 260.7 39.8 344 7-393 4-357 (385)
39 TIGR00887 2A0109 phosphate:H+ 100.0 1.9E-33 4.2E-38 272.5 36.2 418 9-435 17-493 (502)
40 TIGR00879 SP MFS transporter, 100.0 9.5E-34 2.1E-38 274.7 32.4 405 18-434 38-474 (481)
41 PRK15075 citrate-proton sympor 100.0 1.7E-32 3.7E-37 261.4 40.0 357 4-398 11-395 (434)
42 TIGR00897 2A0118 polyol permea 100.0 2.1E-32 4.6E-37 258.1 40.2 375 6-430 11-401 (402)
43 PF05977 MFS_3: Transmembrane 100.0 2E-32 4.4E-37 260.7 39.6 379 6-429 8-393 (524)
44 TIGR00712 glpT glycerol-3-phos 100.0 1.1E-32 2.4E-37 263.0 36.6 367 47-434 57-437 (438)
45 PRK15403 multidrug efflux syst 100.0 4E-32 8.8E-37 256.4 40.0 342 14-397 22-373 (413)
46 TIGR00881 2A0104 phosphoglycer 100.0 1.1E-33 2.4E-38 265.7 28.9 359 17-398 4-373 (379)
47 TIGR00895 2A0115 benzoate tran 100.0 3.8E-33 8.2E-38 263.8 32.6 368 11-394 20-397 (398)
48 PRK10133 L-fucose transporter; 100.0 4.3E-32 9.3E-37 257.4 39.5 347 9-398 27-408 (438)
49 PRK11652 emrD multidrug resist 100.0 5E-32 1.1E-36 255.5 39.1 351 1-396 1-359 (394)
50 PRK15011 sugar efflux transpor 100.0 6.2E-32 1.3E-36 254.2 39.6 373 4-430 11-391 (393)
51 COG2223 NarK Nitrate/nitrite t 100.0 1.1E-32 2.4E-37 243.9 31.4 376 7-432 13-403 (417)
52 PRK10473 multidrug efflux syst 100.0 1.9E-31 4.1E-36 251.4 40.6 343 8-398 3-350 (392)
53 TIGR00898 2A0119 cation transp 100.0 1.2E-32 2.6E-37 268.3 31.4 364 44-431 117-496 (505)
54 PRK03893 putative sialic acid 100.0 5.7E-32 1.2E-36 263.1 36.0 368 7-398 19-429 (496)
55 TIGR00902 2A0127 phenyl propri 100.0 1.2E-31 2.7E-36 251.2 36.1 363 10-427 6-376 (382)
56 PLN00028 nitrate transmembrane 100.0 9.3E-32 2E-36 258.3 35.8 377 8-430 36-433 (476)
57 TIGR00894 2A0114euk Na(+)-depe 100.0 2.9E-32 6.2E-37 262.5 30.9 400 9-432 20-452 (465)
58 PRK11043 putative transporter; 100.0 9.4E-31 2E-35 247.4 40.7 340 10-397 8-357 (401)
59 PRK15034 nitrate/nitrite trans 100.0 7.3E-31 1.6E-35 244.0 38.5 367 7-430 33-454 (462)
60 PRK09528 lacY galactoside perm 100.0 1.1E-31 2.3E-36 255.2 33.0 380 7-428 9-401 (420)
61 TIGR00892 2A0113 monocarboxyla 100.0 3.8E-32 8.2E-37 259.7 30.0 343 44-401 47-399 (455)
62 PRK11102 bicyclomycin/multidru 100.0 7.9E-31 1.7E-35 246.1 37.9 329 21-390 4-342 (377)
63 cd06174 MFS The Major Facilita 100.0 4.4E-31 9.6E-36 245.3 35.3 341 12-427 3-349 (352)
64 TIGR00885 fucP L-fucose:H+ sym 100.0 1.9E-30 4.2E-35 243.9 38.0 345 9-398 4-382 (410)
65 TIGR00883 2A0106 metabolite-pr 100.0 5.2E-31 1.1E-35 248.8 34.2 350 18-398 3-376 (394)
66 PRK11010 ampG muropeptide tran 100.0 5E-30 1.1E-34 246.7 41.2 376 8-431 12-404 (491)
67 TIGR00889 2A0110 nucleoside tr 100.0 4.6E-30 1E-34 242.4 36.7 373 13-433 7-405 (418)
68 KOG0569 Permease of the major 100.0 5E-30 1.1E-34 237.1 35.2 373 51-436 60-460 (485)
69 TIGR00886 2A0108 nitrite extru 100.0 1.2E-30 2.7E-35 243.8 31.1 343 9-383 2-365 (366)
70 PRK06814 acylglycerophosphoeth 100.0 3.5E-30 7.5E-35 273.8 37.9 359 7-397 10-396 (1140)
71 TIGR00896 CynX cyanate transpo 100.0 1.1E-30 2.3E-35 242.9 29.6 330 23-401 15-352 (355)
72 PRK11902 ampG muropeptide tran 100.0 4.6E-29 1E-33 235.6 40.7 369 14-434 5-394 (402)
73 PRK11128 putative 3-phenylprop 100.0 1.3E-29 2.9E-34 237.5 35.7 335 16-398 12-356 (382)
74 TIGR00882 2A0105 oligosacchari 100.0 1.7E-29 3.8E-34 238.2 36.0 375 8-424 2-389 (396)
75 PRK08633 2-acyl-glycerophospho 100.0 2E-29 4.3E-34 269.1 39.5 359 6-396 7-383 (1146)
76 KOG2615 Permease of the major 100.0 6.2E-31 1.3E-35 227.9 22.6 338 47-403 64-420 (451)
77 KOG2532 Permease of the major 100.0 2.3E-30 5E-35 242.5 27.3 366 43-429 65-446 (466)
78 KOG1330 Sugar transporter/spin 100.0 4.3E-31 9.3E-36 235.5 18.3 366 4-402 29-417 (493)
79 TIGR00901 2A0125 AmpG-related 100.0 6.2E-29 1.3E-33 231.2 32.0 318 24-381 4-355 (356)
80 TIGR00792 gph sugar (Glycoside 100.0 2E-28 4.2E-33 234.5 32.5 344 18-398 9-381 (437)
81 TIGR00924 yjdL_sub1_fam amino 100.0 9.7E-28 2.1E-32 229.7 35.0 380 4-397 6-443 (475)
82 COG0738 FucP Fucose permease [ 100.0 3.1E-27 6.7E-32 207.9 34.3 348 9-398 14-385 (422)
83 KOG3764 Vesicular amine transp 100.0 9.1E-30 2E-34 222.1 15.4 352 10-398 23-430 (464)
84 TIGR02718 sider_RhtX_FptX side 100.0 5.1E-26 1.1E-30 214.1 41.1 367 10-425 3-386 (390)
85 PRK10207 dipeptide/tripeptide 100.0 5.6E-27 1.2E-31 224.4 32.3 374 1-394 7-438 (489)
86 PF03825 Nuc_H_symport: Nucleo 100.0 9E-26 1.9E-30 209.4 36.8 373 13-430 7-395 (400)
87 TIGR01301 GPH_sucrose GPH fami 100.0 4.1E-25 8.9E-30 207.2 39.8 393 10-434 6-475 (477)
88 KOG2533 Permease of the major 100.0 4.3E-27 9.3E-32 220.9 25.3 330 44-388 74-421 (495)
89 KOG0252 Inorganic phosphate tr 100.0 3.6E-28 7.8E-33 216.0 15.0 414 12-431 45-499 (538)
90 KOG0254 Predicted transporter 100.0 4.6E-26 1E-30 221.0 28.1 394 25-435 64-488 (513)
91 COG2807 CynX Cyanate permease 100.0 1.1E-24 2.5E-29 188.9 32.8 326 25-399 29-361 (395)
92 KOG2504 Monocarboxylate transp 100.0 9.7E-26 2.1E-30 214.1 27.9 360 44-410 74-463 (509)
93 PF01306 LacY_symp: LacY proto 100.0 1.3E-24 2.7E-29 197.6 33.9 387 6-434 5-405 (412)
94 PF11700 ATG22: Vacuole efflux 100.0 5.5E-24 1.2E-28 201.1 39.5 354 50-434 69-472 (477)
95 PF00083 Sugar_tr: Sugar (and 99.9 9.8E-32 2.1E-36 258.2 -14.2 406 15-437 7-443 (451)
96 TIGR00805 oat sodium-independe 99.9 2.8E-26 6E-31 225.6 23.7 366 16-397 41-581 (633)
97 KOG0255 Synaptic vesicle trans 99.9 6.5E-25 1.4E-29 214.3 29.4 340 46-396 113-467 (521)
98 PRK09584 tppB putative tripept 99.9 3.2E-24 7E-29 206.6 31.7 369 7-391 20-438 (500)
99 COG2270 Permeases of the major 99.9 5.5E-24 1.2E-28 188.8 29.7 376 25-432 32-431 (438)
100 KOG0253 Synaptic vesicle trans 99.9 3.6E-24 7.7E-29 185.0 27.4 373 44-435 106-524 (528)
101 TIGR00806 rfc RFC reduced fola 99.9 6.8E-24 1.5E-28 193.6 30.7 372 44-425 54-443 (511)
102 PF06609 TRI12: Fungal trichot 99.9 2.7E-23 5.8E-28 197.5 33.9 359 22-396 58-466 (599)
103 PRK09669 putative symporter Ya 99.9 3.4E-23 7.4E-28 198.1 33.8 343 18-401 19-391 (444)
104 PRK10429 melibiose:sodium symp 99.9 7.1E-23 1.5E-27 197.0 36.1 350 14-398 12-394 (473)
105 PRK09848 glucuronide transport 99.9 1.7E-23 3.6E-28 200.5 30.3 345 14-398 14-389 (448)
106 PF13347 MFS_2: MFS/sugar tran 99.9 3.6E-23 7.8E-28 196.9 29.1 324 44-398 30-385 (428)
107 TIGR00788 fbt folate/biopterin 99.9 5E-23 1.1E-27 196.7 27.8 392 11-430 29-446 (468)
108 KOG2816 Predicted transporter 99.9 4.9E-22 1.1E-26 185.6 30.3 373 10-404 20-399 (463)
109 TIGR01272 gluP glucose/galacto 99.9 2E-21 4.4E-26 175.5 29.3 259 107-398 10-291 (310)
110 COG2211 MelB Na+/melibiose sym 99.9 6.3E-21 1.4E-25 175.1 32.6 350 14-398 18-397 (467)
111 PRK15462 dipeptide/tripeptide 99.9 2.1E-20 4.6E-25 176.3 32.7 378 5-398 6-437 (493)
112 PRK11462 putative transporter; 99.9 5.3E-20 1.1E-24 175.9 35.6 343 15-398 16-388 (460)
113 PF03209 PUCC: PUCC protein; 99.9 2.6E-19 5.6E-24 159.9 36.4 359 44-431 8-399 (403)
114 KOG4686 Predicted sugar transp 99.9 1.8E-22 3.8E-27 168.4 14.8 360 44-434 72-447 (459)
115 PTZ00207 hypothetical protein; 99.9 1.5E-19 3.2E-24 173.4 34.3 376 44-428 55-550 (591)
116 KOG2325 Predicted transporter/ 99.9 8.3E-21 1.8E-25 174.6 22.9 362 6-398 32-451 (488)
117 COG3104 PTR2 Dipeptide/tripept 99.8 8.9E-17 1.9E-21 146.6 22.9 373 7-392 20-451 (498)
118 KOG2563 Permease of the major 99.8 3.3E-16 7.1E-21 140.4 24.2 324 49-399 77-423 (480)
119 PF03137 OATP: Organic Anion T 99.7 3E-19 6.6E-24 171.3 -0.0 374 15-398 10-515 (539)
120 PF03092 BT1: BT1 family; Int 99.7 3.3E-14 7.2E-19 134.3 26.6 372 44-434 18-417 (433)
121 PRK10054 putative transporter; 99.6 1.8E-14 3.9E-19 135.6 20.3 151 245-396 6-157 (395)
122 PF05631 DUF791: Protein of un 99.6 6.4E-13 1.4E-17 117.4 25.5 271 14-328 40-324 (354)
123 TIGR00889 2A0110 nucleoside tr 99.6 4E-14 8.6E-19 134.1 17.5 188 11-199 211-410 (418)
124 KOG3626 Organic anion transpor 99.6 3.5E-14 7.5E-19 136.6 17.1 347 44-397 125-649 (735)
125 TIGR00924 yjdL_sub1_fam amino 99.6 9.3E-14 2E-18 133.5 19.9 154 244-398 8-168 (475)
126 TIGR00880 2_A_01_02 Multidrug 99.6 5.7E-15 1.2E-19 117.6 9.7 132 58-193 5-140 (141)
127 PRK11646 multidrug resistance 99.6 1.4E-13 3.1E-18 129.7 20.4 146 250-396 14-160 (400)
128 PF01770 Folate_carrier: Reduc 99.6 7.5E-12 1.6E-16 113.8 30.3 324 58-388 48-393 (412)
129 PRK11663 regulatory protein Uh 99.6 2.9E-13 6.3E-18 129.2 20.4 148 249-398 26-174 (434)
130 PF07690 MFS_1: Major Facilita 99.6 1.7E-13 3.6E-18 127.4 18.2 165 252-425 2-167 (352)
131 TIGR00710 efflux_Bcr_CflA drug 99.6 2.7E-13 5.8E-18 127.7 19.4 169 251-429 10-179 (385)
132 TIGR00900 2A0121 H+ Antiporter 99.6 2.4E-13 5.2E-18 126.9 18.8 169 251-429 4-178 (365)
133 PRK03545 putative arabinose tr 99.6 4.7E-13 1E-17 126.1 20.1 153 266-428 29-182 (390)
134 PRK10642 proline/glycine betai 99.6 3.4E-13 7.3E-18 130.8 19.5 167 20-198 262-436 (490)
135 PRK15462 dipeptide/tripeptide 99.6 5.2E-13 1.1E-17 126.5 20.2 175 244-427 7-186 (493)
136 PRK10213 nepI ribonucleoside t 99.6 8.8E-13 1.9E-17 124.1 21.7 153 264-426 38-191 (394)
137 PRK10489 enterobactin exporter 99.5 3.3E-13 7.2E-18 128.3 18.4 182 240-431 11-198 (417)
138 COG2814 AraJ Arabinose efflux 99.5 1E-12 2.2E-17 118.9 20.4 175 247-431 14-189 (394)
139 PRK05122 major facilitator sup 99.5 4.1E-13 8.8E-18 127.1 18.1 154 244-398 13-175 (399)
140 PRK10504 putative transporter; 99.5 8.1E-13 1.8E-17 127.9 20.2 151 246-398 10-161 (471)
141 PRK10091 MFS transport protein 99.5 7.8E-13 1.7E-17 124.2 19.3 171 246-426 3-174 (382)
142 TIGR02332 HpaX 4-hydroxyphenyl 99.5 1.2E-12 2.7E-17 123.9 20.7 134 262-397 24-158 (412)
143 PRK12382 putative transporter; 99.5 9E-13 1.9E-17 124.4 19.8 152 246-398 15-175 (392)
144 PRK03633 putative MFS family t 99.5 1.1E-12 2.3E-17 123.2 19.8 150 246-397 6-156 (381)
145 PRK11195 lysophospholipid tran 99.5 8.4E-13 1.8E-17 124.2 19.0 148 246-397 3-150 (393)
146 PRK09874 drug efflux system pr 99.5 6.4E-13 1.4E-17 126.1 17.7 169 17-193 228-400 (408)
147 PRK09528 lacY galactoside perm 99.5 1.7E-13 3.6E-18 130.5 13.5 164 25-196 240-408 (420)
148 PRK10207 dipeptide/tripeptide 99.5 1.5E-12 3.3E-17 125.2 20.1 154 244-398 12-170 (489)
149 PRK14995 methyl viologen resis 99.5 1.7E-12 3.7E-17 125.9 20.5 172 248-429 8-181 (495)
150 PRK10473 multidrug efflux syst 99.5 2.1E-12 4.5E-17 121.9 20.5 151 246-398 3-154 (392)
151 TIGR01299 synapt_SV2 synaptic 99.5 1.7E-12 3.6E-17 129.1 20.4 131 266-398 187-318 (742)
152 COG2271 UhpC Sugar phosphate p 99.5 3.8E-13 8.3E-18 120.2 13.6 169 251-429 34-205 (448)
153 TIGR00711 efflux_EmrB drug res 99.5 1.5E-12 3.2E-17 126.6 18.7 146 251-398 7-153 (485)
154 PRK03699 putative transporter; 99.5 3.4E-12 7.4E-17 120.4 20.6 148 248-397 9-157 (394)
155 TIGR00891 2A0112 putative sial 99.5 2.1E-12 4.5E-17 122.5 19.2 149 248-398 14-163 (405)
156 PRK09584 tppB putative tripept 99.5 3.1E-12 6.6E-17 123.8 20.5 155 243-398 18-177 (500)
157 PRK11043 putative transporter; 99.5 3.5E-12 7.6E-17 120.7 20.5 169 255-432 12-183 (401)
158 TIGR00886 2A0108 nitrite extru 99.5 3.4E-12 7.4E-17 119.3 20.0 149 248-398 3-153 (366)
159 TIGR00897 2A0118 polyol permea 99.5 4.5E-12 9.7E-17 119.9 20.3 152 245-398 12-169 (402)
160 PRK15034 nitrate/nitrite trans 99.5 7E-12 1.5E-16 117.6 20.9 148 246-395 34-187 (462)
161 PF06963 FPN1: Ferroportin1 (F 99.5 2.6E-10 5.7E-15 105.8 30.2 370 8-390 2-411 (432)
162 TIGR00895 2A0115 benzoate tran 99.5 1.8E-12 3.9E-17 122.5 16.0 137 260-398 31-168 (398)
163 PLN00028 nitrate transmembrane 99.5 1.5E-11 3.3E-16 118.6 22.5 163 264-430 54-219 (476)
164 PRK11551 putative 3-hydroxyphe 99.5 4.5E-12 9.8E-17 120.2 18.6 146 250-397 19-165 (406)
165 TIGR00893 2A0114 d-galactonate 99.5 2.6E-12 5.5E-17 121.4 16.8 154 264-427 12-166 (399)
166 KOG3762 Predicted transporter 99.5 8.5E-13 1.8E-17 121.0 12.6 175 243-427 368-544 (618)
167 PRK11102 bicyclomycin/multidru 99.5 4.1E-12 9E-17 119.2 17.9 135 262-398 7-142 (377)
168 TIGR00892 2A0113 monocarboxyla 99.5 5.7E-13 1.2E-17 127.7 12.2 165 9-185 242-415 (455)
169 PRK15011 sugar efflux transpor 99.5 3.4E-12 7.3E-17 120.4 17.1 164 17-193 225-392 (393)
170 PRK15402 multidrug efflux syst 99.4 9.4E-12 2E-16 118.0 20.2 157 261-427 28-185 (406)
171 TIGR00899 2A0120 sugar efflux 99.4 9.8E-12 2.1E-16 116.6 19.6 168 252-428 3-174 (375)
172 PRK11652 emrD multidrug resist 99.4 8.7E-12 1.9E-16 117.8 19.2 145 252-398 14-159 (394)
173 TIGR00903 2A0129 major facilit 99.4 8.9E-12 1.9E-16 115.7 18.4 158 259-427 4-162 (368)
174 cd06174 MFS The Major Facilita 99.4 3.3E-12 7E-17 118.5 15.4 168 9-187 176-348 (352)
175 KOG0637 Sucrose transporter an 99.4 5.5E-12 1.2E-16 113.7 15.4 373 8-402 32-475 (498)
176 PRK15403 multidrug efflux syst 99.4 2.2E-11 4.7E-16 115.4 19.9 155 263-427 33-188 (413)
177 PRK12307 putative sialic acid 99.4 9.5E-12 2.1E-16 118.8 17.6 149 248-398 20-169 (426)
178 PRK09705 cynX putative cyanate 99.4 2.6E-11 5.7E-16 114.2 19.9 133 263-398 26-159 (393)
179 PRK03893 putative sialic acid 99.4 1.7E-11 3.6E-16 119.6 18.8 149 248-398 22-171 (496)
180 TIGR00712 glpT glycerol-3-phos 99.4 2.5E-11 5.4E-16 116.2 19.3 130 265-397 46-180 (438)
181 TIGR00881 2A0104 phosphoglycer 99.4 4.1E-12 9E-17 119.2 13.5 139 257-397 6-146 (379)
182 TIGR00902 2A0127 phenyl propri 99.4 1.8E-11 3.9E-16 115.0 17.5 164 8-185 205-373 (382)
183 TIGR00890 2A0111 Oxalate/Forma 99.4 1.6E-11 3.5E-16 115.1 17.2 154 262-426 19-173 (377)
184 PF05977 MFS_3: Transmembrane 99.4 5E-11 1.1E-15 114.6 20.1 168 9-187 219-390 (524)
185 PRK09556 uhpT sugar phosphate 99.4 1.9E-11 4.2E-16 117.9 17.5 132 264-397 47-184 (467)
186 TIGR00885 fucP L-fucose:H+ sym 99.4 1.1E-10 2.4E-15 110.3 20.7 147 249-397 6-156 (410)
187 KOG1330 Sugar transporter/spin 99.4 7.9E-13 1.7E-17 119.4 5.6 177 248-433 35-212 (493)
188 PRK10133 L-fucose transporter; 99.3 2.7E-10 5.9E-15 108.6 22.6 145 249-395 29-177 (438)
189 TIGR00806 rfc RFC reduced fola 99.3 1.3E-10 2.8E-15 107.3 19.0 159 265-431 44-204 (511)
190 PRK11273 glpT sn-glycerol-3-ph 99.3 1.9E-10 4.1E-15 110.5 20.6 122 267-391 50-176 (452)
191 TIGR00882 2A0105 oligosacchari 99.3 1E-10 2.2E-15 110.6 17.8 175 245-431 1-184 (396)
192 TIGR00769 AAA ADP/ATP carrier 99.3 8.1E-08 1.7E-12 90.5 36.4 359 8-395 7-437 (472)
193 PRK10406 alpha-ketoglutarate t 99.3 5.7E-10 1.2E-14 106.6 21.7 139 255-395 31-184 (432)
194 KOG3764 Vesicular amine transp 99.3 4.4E-11 9.6E-16 106.0 11.5 148 277-433 101-250 (464)
195 TIGR00883 2A0106 metabolite-pr 99.3 6.1E-11 1.3E-15 111.9 13.4 160 10-180 221-390 (394)
196 TIGR00879 SP MFS transporter, 99.3 4.7E-11 1E-15 115.8 12.9 147 48-195 316-474 (481)
197 PRK09952 shikimate transporter 99.3 6.3E-10 1.4E-14 106.4 20.0 146 250-397 26-187 (438)
198 PRK11902 ampG muropeptide tran 99.3 8E-10 1.7E-14 104.6 20.6 168 252-430 5-182 (402)
199 PRK11128 putative 3-phenylprop 99.2 3.9E-10 8.4E-15 106.0 17.1 161 9-183 206-371 (382)
200 KOG3098 Uncharacterized conser 99.2 1.7E-08 3.7E-13 93.8 27.3 308 57-394 56-411 (461)
201 PF11700 ATG22: Vacuole efflux 99.2 4.9E-10 1.1E-14 106.7 17.7 176 7-194 280-470 (477)
202 PRK10077 xylE D-xylose transpo 99.2 3.8E-10 8.2E-15 109.6 17.1 152 278-431 51-216 (479)
203 COG2223 NarK Nitrate/nitrite t 99.2 5.1E-10 1.1E-14 100.6 16.3 131 266-398 33-166 (417)
204 TIGR00805 oat sodium-independe 99.2 1.5E-10 3.3E-15 114.6 14.0 137 261-398 47-235 (633)
205 TIGR00880 2_A_01_02 Multidrug 99.2 1.1E-10 2.4E-15 92.6 10.7 133 290-431 6-139 (141)
206 TIGR00896 CynX cyanate transpo 99.2 4.9E-10 1.1E-14 104.2 16.6 132 263-398 17-149 (355)
207 TIGR00894 2A0114euk Na(+)-depe 99.2 1.7E-10 3.6E-15 111.5 13.7 121 276-397 70-193 (465)
208 TIGR00887 2A0109 phosphate:H+ 99.2 1.7E-09 3.6E-14 105.5 20.3 142 254-396 24-176 (502)
209 PRK11010 ampG muropeptide tran 99.2 6.3E-09 1.4E-13 100.7 24.0 166 17-194 231-405 (491)
210 TIGR00901 2A0125 AmpG-related 99.2 1.5E-09 3.3E-14 101.0 18.5 165 264-432 6-180 (356)
211 COG3104 PTR2 Dipeptide/tripept 99.2 7.1E-10 1.5E-14 102.0 15.5 181 244-433 19-209 (498)
212 PTZ00207 hypothetical protein; 99.2 3.7E-09 8E-14 102.3 21.3 129 264-396 45-180 (591)
213 PRK08633 2-acyl-glycerophospho 99.2 1.3E-09 2.8E-14 117.4 19.9 154 243-397 6-165 (1146)
214 PRK15075 citrate-proton sympor 99.2 1.6E-09 3.5E-14 103.5 18.5 147 248-396 17-178 (434)
215 PF02487 CLN3: CLN3 protein; 99.2 3.7E-08 8.1E-13 90.0 24.8 323 53-394 61-394 (402)
216 PRK06814 acylglycerophosphoeth 99.1 2.5E-09 5.3E-14 114.9 20.1 155 243-398 8-171 (1140)
217 TIGR01301 GPH_sucrose GPH fami 99.1 4.2E-09 9E-14 99.8 19.0 184 248-433 6-221 (477)
218 PF03825 Nuc_H_symport: Nucleo 99.1 3.5E-09 7.5E-14 98.9 18.2 176 8-194 207-398 (400)
219 TIGR02718 sider_RhtX_FptX side 99.1 2.1E-09 4.6E-14 101.3 16.3 164 10-185 210-385 (390)
220 PF01306 LacY_symp: LacY proto 99.1 5.4E-09 1.2E-13 96.0 17.9 182 8-197 220-406 (412)
221 TIGR00898 2A0119 cation transp 99.1 2E-09 4.3E-14 105.2 16.2 135 59-196 363-499 (505)
222 KOG3810 Micronutrient transpor 99.1 3.8E-09 8.3E-14 91.9 15.3 354 65-434 56-425 (433)
223 KOG2615 Permease of the major 99.1 8.6E-10 1.9E-14 97.3 11.5 117 278-396 64-181 (451)
224 TIGR00792 gph sugar (Glycoside 99.1 4.5E-09 9.8E-14 100.8 16.2 168 257-426 10-190 (437)
225 COG2270 Permeases of the major 99.1 2.6E-09 5.5E-14 96.2 13.1 176 7-194 251-431 (438)
226 KOG2532 Permease of the major 99.0 4.2E-09 9.1E-14 99.7 13.0 150 275-432 66-219 (466)
227 COG0738 FucP Fucose permease [ 99.0 5.2E-08 1.1E-12 87.3 19.0 134 263-397 29-166 (422)
228 KOG2504 Monocarboxylate transp 99.0 8.9E-09 1.9E-13 98.7 14.5 172 8-192 298-476 (509)
229 PRK09848 glucuronide transport 99.0 3.4E-09 7.3E-14 101.9 11.4 151 7-166 227-384 (448)
230 TIGR01272 gluP glucose/galacto 98.9 4.2E-08 9.1E-13 88.9 16.5 157 9-177 141-301 (310)
231 PRK10429 melibiose:sodium symp 98.9 3.5E-08 7.6E-13 95.4 17.0 146 252-398 12-170 (473)
232 PRK09669 putative symporter Ya 98.9 2.1E-08 4.5E-13 96.3 14.8 144 254-398 17-173 (444)
233 KOG4686 Predicted sugar transp 98.9 4.5E-08 9.7E-13 83.1 14.2 148 7-167 263-411 (459)
234 PF06609 TRI12: Fungal trichot 98.9 8.7E-08 1.9E-12 92.4 17.1 123 267-393 65-188 (599)
235 KOG3574 Acetyl-CoA transporter 98.9 9.8E-07 2.1E-11 78.2 21.4 350 7-398 30-432 (510)
236 PF13347 MFS_2: MFS/sugar tran 98.8 4.8E-08 1E-12 93.3 13.9 148 7-166 224-380 (428)
237 KOG4332 Predicted sugar transp 98.8 5.5E-08 1.2E-12 81.8 11.8 299 47-383 68-392 (454)
238 KOG0569 Permease of the major 98.8 1.2E-07 2.6E-12 89.1 15.4 152 47-199 301-462 (485)
239 PRK11462 putative transporter; 98.8 2.4E-07 5.2E-12 89.0 17.3 146 253-399 16-174 (460)
240 TIGR00926 2A1704 Peptide:H+ sy 98.8 1.1E-06 2.5E-11 86.8 22.1 139 50-189 22-180 (654)
241 COG0477 ProP Permeases of the 98.8 3.1E-07 6.7E-12 83.4 17.1 162 13-182 7-176 (338)
242 KOG0254 Predicted transporter 98.8 5.4E-07 1.2E-11 88.0 19.2 112 283-396 90-202 (513)
243 KOG3762 Predicted transporter 98.7 1E-07 2.3E-12 88.2 11.3 163 13-187 376-543 (618)
244 PF06813 Nodulin-like: Nodulin 98.7 1.2E-06 2.6E-11 75.5 17.0 155 268-433 23-185 (250)
245 PF05631 DUF791: Protein of un 98.7 1.1E-05 2.3E-10 72.2 23.4 150 276-433 63-219 (354)
246 KOG0255 Synaptic vesicle trans 98.7 3E-07 6.5E-12 90.2 13.6 122 275-398 111-233 (521)
247 COG2211 MelB Na+/melibiose sym 98.7 1.3E-06 2.7E-11 81.5 16.8 181 251-433 17-210 (467)
248 KOG2533 Permease of the major 98.7 9.9E-07 2.1E-11 84.0 16.3 154 275-431 74-228 (495)
249 PF13000 Acatn: Acetyl-coenzym 98.7 1.2E-05 2.6E-10 74.5 22.5 374 12-398 4-468 (544)
250 TIGR00788 fbt folate/biopterin 98.7 1.8E-06 3.9E-11 83.1 18.3 172 249-432 29-211 (468)
251 PF06813 Nodulin-like: Nodulin 98.6 7.2E-06 1.6E-10 70.7 19.4 120 44-166 30-153 (250)
252 COG2807 CynX Cyanate permease 98.6 2.9E-06 6.3E-11 75.2 15.7 167 10-189 210-383 (395)
253 PF03219 TLC: TLC ATP/ADP tran 98.6 0.00052 1.1E-08 65.5 31.9 246 52-318 59-354 (491)
254 TIGR00926 2A1704 Peptide:H+ sy 98.5 1.3E-05 2.9E-10 79.3 18.5 166 261-428 2-180 (654)
255 KOG0252 Inorganic phosphate tr 98.4 5.8E-06 1.2E-10 75.6 14.1 117 279-396 81-205 (538)
256 PF03209 PUCC: PUCC protein; 98.4 1.2E-05 2.6E-10 73.1 16.0 168 12-187 212-394 (403)
257 PF06779 DUF1228: Protein of u 98.4 1.2E-06 2.6E-11 60.8 7.2 76 20-103 4-79 (85)
258 KOG2325 Predicted transporter/ 98.4 1.7E-05 3.6E-10 74.4 15.9 183 246-431 34-230 (488)
259 PF00083 Sugar_tr: Sugar (and 98.3 9.4E-09 2E-13 99.0 -6.9 112 282-394 46-161 (451)
260 PF05978 UNC-93: Ion channel r 98.3 1.3E-05 2.7E-10 63.7 11.6 102 58-164 44-145 (156)
261 PF12832 MFS_1_like: MFS_1 lik 98.3 2.2E-06 4.8E-11 59.1 6.4 70 13-90 5-74 (77)
262 KOG2816 Predicted transporter 98.2 6.1E-05 1.3E-09 71.4 15.4 131 292-433 72-202 (463)
263 PF12832 MFS_1_like: MFS_1 lik 98.2 2.4E-05 5.3E-10 53.9 9.4 70 251-322 5-74 (77)
264 KOG2563 Permease of the major 98.2 8.3E-05 1.8E-09 68.2 14.8 128 269-398 67-203 (480)
265 KOG0253 Synaptic vesicle trans 98.1 0.00017 3.6E-09 64.4 15.3 135 261-398 92-227 (528)
266 COG3202 ATP/ADP translocase [E 98.1 0.009 2E-07 55.9 29.1 257 51-326 61-365 (509)
267 KOG3880 Predicted small molecu 98.1 1.4E-05 3E-10 69.0 7.8 319 53-394 64-401 (409)
268 KOG1237 H+/oligopeptide sympor 98.0 0.0039 8.5E-08 61.0 24.1 136 51-187 73-241 (571)
269 TIGR00939 2a57 Equilibrative N 98.0 0.006 1.3E-07 57.9 24.0 52 339-390 376-427 (437)
270 PF05978 UNC-93: Ion channel r 98.0 0.00075 1.6E-08 53.7 15.0 106 289-396 44-150 (156)
271 PF03092 BT1: BT1 family; Int 97.9 0.0004 8.7E-09 66.1 15.6 131 266-398 9-151 (433)
272 PF00854 PTR2: POT family; In 97.8 0.00026 5.7E-09 66.2 12.3 105 82-187 2-119 (372)
273 PF03137 OATP: Organic Anion T 97.7 6.6E-06 1.4E-10 79.9 -0.4 172 260-432 16-252 (539)
274 KOG1479 Nucleoside transporter 97.6 0.018 3.9E-07 53.0 20.2 113 21-141 31-149 (406)
275 COG0477 ProP Permeases of the 97.6 0.0045 9.7E-08 55.8 16.3 136 260-397 16-158 (338)
276 KOG3626 Organic anion transpor 97.6 0.00037 8E-09 68.6 9.1 188 246-434 96-347 (735)
277 PF06779 DUF1228: Protein of u 97.5 0.0013 2.9E-08 45.7 9.1 77 260-338 6-82 (85)
278 PF01770 Folate_carrier: Reduc 97.4 0.024 5.3E-07 52.6 18.4 134 262-396 19-154 (412)
279 TIGR00769 AAA ADP/ATP carrier 97.2 0.058 1.2E-06 51.6 18.9 126 272-397 28-191 (472)
280 PRK03612 spermidine synthase; 97.0 0.083 1.8E-06 51.6 18.4 143 252-396 20-170 (521)
281 PF02487 CLN3: CLN3 protein; 96.9 0.029 6.3E-07 52.0 13.9 110 50-167 280-394 (402)
282 KOG3098 Uncharacterized conser 96.8 0.045 9.7E-07 51.8 14.4 111 54-166 282-410 (461)
283 KOG0637 Sucrose transporter an 96.8 0.002 4.3E-08 59.5 5.0 144 247-392 33-200 (498)
284 KOG2601 Iron transporter [Inor 96.6 0.048 1E-06 49.2 12.2 76 9-91 28-103 (503)
285 PRK03612 spermidine synthase; 96.5 0.19 4.1E-06 49.1 16.7 117 47-166 46-167 (521)
286 PF07672 MFS_Mycoplasma: Mycop 96.3 0.19 4.1E-06 43.3 13.5 50 140-189 2-60 (267)
287 PF00854 PTR2: POT family; In 96.2 0.072 1.6E-06 49.9 11.9 111 314-432 2-125 (372)
288 PF01733 Nucleoside_tran: Nucl 95.7 0.0035 7.6E-08 56.8 0.5 52 339-390 252-303 (309)
289 PF06963 FPN1: Ferroportin1 (F 95.5 0.46 1E-05 45.0 13.7 132 47-179 289-427 (432)
290 KOG3574 Acetyl-CoA transporter 95.0 0.8 1.7E-05 41.9 12.8 142 245-391 30-189 (510)
291 KOG4830 Predicted sugar transp 94.8 0.012 2.6E-07 50.1 1.1 146 244-389 199-349 (412)
292 KOG4332 Predicted sugar transp 93.8 0.75 1.6E-05 39.9 9.5 134 53-187 284-427 (454)
293 KOG3097 Predicted membrane pro 93.6 5.3 0.00011 36.0 18.0 69 65-138 72-140 (390)
294 TIGR00939 2a57 Equilibrative N 92.4 1.7 3.7E-05 41.5 11.1 148 9-164 270-428 (437)
295 PF03219 TLC: TLC ATP/ADP tran 92.1 8.9 0.00019 37.2 15.5 117 280-396 56-205 (491)
296 KOG1237 H+/oligopeptide sympor 91.6 7.8 0.00017 38.5 14.9 146 251-397 42-220 (571)
297 PF07857 DUF1632: CEO family ( 91.4 9.1 0.0002 33.3 15.1 29 261-289 193-225 (254)
298 KOG2881 Predicted membrane pro 90.7 5.4 0.00012 34.2 10.8 77 245-326 206-283 (294)
299 KOG3880 Predicted small molecu 85.6 3.5 7.5E-05 36.8 6.9 106 52-166 289-400 (409)
300 KOG1479 Nucleoside transporter 84.8 7.6 0.00017 36.2 9.1 129 26-164 261-399 (406)
301 PF13000 Acatn: Acetyl-coenzym 83.1 9.4 0.0002 36.7 9.0 142 250-391 4-174 (544)
302 COG3202 ATP/ADP translocase [E 83.0 46 0.001 32.1 16.8 125 272-397 48-210 (509)
303 COG5336 Uncharacterized protei 79.9 17 0.00037 26.5 7.3 33 366-398 37-69 (116)
304 PRK15015 carbon starvation pro 77.0 85 0.0018 31.5 20.8 104 61-172 11-116 (701)
305 KOG3097 Predicted membrane pro 76.1 58 0.0012 29.7 11.1 93 301-394 76-180 (390)
306 PF01733 Nucleoside_tran: Nucl 75.8 1.1 2.3E-05 40.7 0.6 150 9-164 144-304 (309)
307 KOG3810 Micronutrient transpor 75.0 20 0.00044 32.8 8.1 100 51-154 271-372 (433)
308 COG5336 Uncharacterized protei 70.4 13 0.00027 27.1 4.7 39 50-88 41-80 (116)
309 TIGR02840 spore_YtaF putative 66.5 79 0.0017 26.7 14.3 49 277-326 152-202 (206)
310 PF07672 MFS_Mycoplasma: Mycop 64.0 53 0.0011 28.8 8.1 69 53-121 143-218 (267)
311 PF02990 EMP70: Endomembrane p 60.6 1.8E+02 0.0039 28.8 14.7 24 288-312 303-326 (521)
312 COG4262 Predicted spermidine s 54.4 1.8E+02 0.004 26.9 13.2 84 51-135 43-132 (508)
313 COG4262 Predicted spermidine s 53.1 1.9E+02 0.0042 26.8 13.7 116 277-395 38-163 (508)
314 PF11947 DUF3464: Protein of u 51.7 85 0.0018 24.9 6.8 34 353-386 112-145 (153)
315 cd02434 Nodulin-21_like_3 Nodu 50.5 1.3E+02 0.0028 25.8 8.4 14 260-273 145-158 (225)
316 COG3559 TnrB3 Putative exporte 50.1 2.3E+02 0.005 26.9 15.5 32 122-153 175-208 (536)
317 PRK11469 hypothetical protein; 49.0 1.5E+02 0.0033 24.5 16.8 53 278-330 130-182 (188)
318 PF06912 DUF1275: Protein of u 48.4 1.7E+02 0.0036 24.7 14.6 29 145-173 167-195 (209)
319 PF02694 UPF0060: Uncharacteri 48.3 48 0.001 24.3 4.5 51 282-333 54-104 (107)
320 COG2836 Uncharacterized conser 47.0 1.8E+02 0.004 24.8 16.4 71 248-321 132-205 (232)
321 PRK02237 hypothetical protein; 44.7 81 0.0017 23.2 5.2 50 283-333 57-106 (109)
322 PF02694 UPF0060: Uncharacteri 41.0 32 0.00069 25.1 2.7 51 52-102 55-105 (107)
323 PF04341 DUF485: Protein of un 38.1 1.5E+02 0.0032 21.1 6.7 50 245-294 15-64 (91)
324 PRK09664 tryptophan permease T 37.1 3.8E+02 0.0082 25.6 15.4 20 342-361 201-220 (415)
325 PF06783 UPF0239: Uncharacteri 36.6 85 0.0018 21.9 4.1 20 170-189 23-42 (85)
326 PRK02237 hypothetical protein; 35.1 57 0.0012 23.9 3.2 50 53-102 58-107 (109)
327 PF11872 DUF3392: Protein of u 34.9 1.9E+02 0.004 21.4 7.4 36 242-277 45-80 (106)
328 PF02554 CstA: Carbon starvati 34.3 3.9E+02 0.0085 24.9 21.1 34 140-173 52-86 (376)
329 PF07760 DUF1616: Protein of u 32.4 3.4E+02 0.0075 24.3 8.6 56 110-167 22-77 (287)
330 cd02433 Nodulin-21_like_2 Nodu 31.8 3.4E+02 0.0074 23.5 9.2 14 260-273 161-174 (234)
331 PF12805 FUSC-like: FUSC-like 30.5 3.1E+02 0.0067 24.5 8.1 105 315-442 2-108 (284)
332 KOG2601 Iron transporter [Inor 30.0 4.8E+02 0.01 24.7 13.6 147 250-398 31-202 (503)
333 cd02432 Nodulin-21_like_1 Nodu 29.2 3.6E+02 0.0079 23.0 9.6 14 260-273 147-160 (218)
334 TIGR01667 YCCS_YHJK integral m 28.1 7E+02 0.015 25.9 11.0 48 70-119 42-93 (701)
335 PRK11588 hypothetical protein; 27.3 6.1E+02 0.013 25.0 19.2 28 361-389 433-460 (506)
336 TIGR03644 marine_trans_1 proba 27.3 5.5E+02 0.012 24.4 17.1 46 342-388 296-341 (404)
337 COG1288 Predicted membrane pro 27.3 5.7E+02 0.012 24.6 9.2 29 360-389 410-438 (481)
338 TIGR01666 YCCS hypothetical me 27.1 6.7E+02 0.014 26.1 10.4 47 71-119 43-93 (704)
339 COG1268 BioY Uncharacterized c 26.5 1.2E+02 0.0026 25.0 4.2 21 60-80 91-111 (184)
340 TIGR00814 stp serine transport 26.4 5.6E+02 0.012 24.3 17.6 34 138-171 2-35 (397)
341 COG2095 MarC Multiple antibiot 25.8 4.1E+02 0.0088 22.4 9.6 77 348-431 18-94 (203)
342 PF04024 PspC: PspC domain; I 25.2 2E+02 0.0043 18.7 4.3 26 170-195 32-60 (61)
343 PF01350 Flavi_NS4A: Flaviviru 24.8 1.6E+02 0.0034 23.1 4.3 30 416-445 102-131 (144)
344 COG1983 PspC Putative stress-r 23.3 2.4E+02 0.0053 19.0 4.4 33 164-196 22-65 (70)
345 PF01988 VIT1: VIT family; In 23.3 4.6E+02 0.01 22.2 10.8 15 261-275 143-157 (213)
346 COG2233 UraA Xanthine/uracil p 23.3 6.3E+02 0.014 24.4 8.8 128 1-139 9-136 (451)
347 KOG4830 Predicted sugar transp 22.5 2E+02 0.0044 25.4 5.0 61 252-314 23-92 (412)
348 PF11511 RhodobacterPufX: Intr 22.5 2.4E+02 0.0053 18.7 4.2 29 169-197 30-58 (67)
349 PRK13629 threonine/serine tran 22.2 7.2E+02 0.016 24.0 17.1 31 138-168 18-48 (443)
350 PF10183 ESSS: ESSS subunit of 22.1 1.5E+02 0.0032 21.8 3.6 29 167-195 57-85 (105)
351 PF04964 Flp_Fap: Flp/Fap pili 21.4 1.5E+02 0.0033 17.9 3.0 37 273-309 2-38 (46)
352 TIGR00836 amt ammonium transpo 21.2 6.5E+02 0.014 23.9 8.5 196 2-216 188-401 (403)
353 COG3619 Predicted membrane pro 21.1 5.4E+02 0.012 22.1 13.4 27 54-80 58-84 (226)
354 PF11298 DUF3099: Protein of u 21.0 1.2E+02 0.0026 20.6 2.7 29 75-103 11-39 (73)
355 PF09930 DUF2162: Predicted tr 20.4 5.6E+02 0.012 22.0 13.0 51 273-327 122-172 (224)
356 PF12273 RCR: Chitin synthesis 20.2 60 0.0013 24.9 1.3 15 170-184 1-15 (130)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=285.52 Aligned_cols=372 Identities=16% Similarity=0.188 Sum_probs=308.6
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
+..++.+.++.|.......+..+.+|++.+ |+++|....|++.|+|.++..+++|+...+.||+.||++++.
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~--------dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~ 83 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAA--------DLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLG 83 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHH
Confidence 445677788889999999999999999985 457888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh--
Q 013312 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA-- 164 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~-- 164 (445)
.+.++.++++++++++| |+.++++|++.|+ +.|.+++...++..|..|+++|++++++...+.+++.++|..++
T Consensus 84 ~l~lFi~~n~l~alAp~---f~~Ll~aR~~~g~-a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 84 LLALFIVSNLLSALAPS---FAVLLLARALAGL-AHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999 9999999999999 99999999999999999999999999999999988888876655
Q ss_pred --hhhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHh
Q 013312 165 --RFLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (445)
Q Consensus 165 --~~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (445)
+.+|||+.|++.+.++++..+..+..+| |++.+++ ...+.++.++.
T Consensus 160 ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~-----------------------------~~~~~~~~~~~- 207 (394)
T COG2814 160 LGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGS-----------------------------LPGPLRTLLRL- 207 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCC-----------------------------CCcchhHHHHH-
Confidence 4579999999999999999999999999 2111111 01123343443
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 013312 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (445)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (445)
.++|.++...+..++...+.+..++|+.+++++..|+|+...++.+..++++.++++ .++|++.|| +.|+.+.....+
T Consensus 208 l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn-~~gGrl~dr-~~~~~l~~~~~l 285 (394)
T COG2814 208 LRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGN-LLGGRLADR-GPRRALIAALLL 285 (394)
T ss_pred hcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHH-HHHhhhccc-cchhHHHHHHHH
Confidence 467778888888999999999999999999999999999999999999999999999 888999999 888888888777
Q ss_pred HHHHHHHHHhcCC-chhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 013312 323 ACINMFICSISWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 400 (445)
Q Consensus 323 ~~~~~~~~~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~ 400 (445)
.++..+.+.+..+ .+.... ..++++......+..+....+ .-+|.++.+.+++....++|..+|..++|.++|+.
T Consensus 286 ~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-- 362 (394)
T COG2814 286 LALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-- 362 (394)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 7777777666554 333333 344566666666666666676 33588999999999999999999999999999985
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHhccCCC
Q 013312 401 KGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 433 (445)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (445)
++.. ..+..+++.+++....+...+++
T Consensus 363 -----g~~~-~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 363 -----GYAA-TGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred -----chHH-HHHHHHHHHHHHHHHHHHHHhcc
Confidence 3333 35666666677666665554443
No 2
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1e-37 Score=293.50 Aligned_cols=367 Identities=14% Similarity=0.134 Sum_probs=280.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
.++.+.+..++.........+.+|.+.+ +++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~--------~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 81 (390)
T PRK03545 10 RVVTLALAAFIFNTTEFVPVGLLSDIAQ--------SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLF 81 (390)
T ss_pred HHHHHHHHHHHHHhHHHHHHcchHHHHh--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 3445555555544444555667788764 45777789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh--
Q 013312 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-- 166 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-- 166 (445)
++.+++++.+++++| ++.+++.|+++|+ +.+...+...+++.|++|+|+|++++++.+...++|..+||.+++.
T Consensus 82 ~~~~~~~~~~~~~~~---~~~l~~~r~~~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~ 157 (390)
T PRK03545 82 VLFIASHVLSALAWN---FTVLLISRIGIAF-AHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG 157 (390)
T ss_pred HHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 999999999999999 9999999999999 7788889999999999999999999999999999999999988765
Q ss_pred --hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhc
Q 013312 167 --LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (445)
Q Consensus 167 --~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (445)
.+||+.|++.++++++..+.....+||+++++++ +.++. +...+
T Consensus 158 ~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------------------------~~~~~-~~~~~ 203 (390)
T PRK03545 158 QYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHSG---------------------------------SLKSL-PLLFR 203 (390)
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc---------------------------------hHHHH-HHHHh
Confidence 5999999999988777666655556654321100 11221 22445
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 013312 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (445)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (445)
+|.++......++..........+.+.|+++..|+|+.+.+......+++.+++. +..+++.||+++|+... +..+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~~-~~~~~~ 281 (390)
T PRK03545 204 RPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGS-VLFSRLGNRHPSGFLLI-AIALLL 281 (390)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHHH-HHHHHH
Confidence 6666655555555555555566788888888789999999999999999999998 77799999999876544 444444
Q ss_pred HHHH-HHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013312 325 INMF-ICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 402 (445)
Q Consensus 325 ~~~~-~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~ 402 (445)
.+.. .....++.+..+. ..+.|++.....+.....+.+..| ++|++++|..+...++|..+||.+.|.++|+.
T Consensus 282 ~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~---- 356 (390)
T PRK03545 282 VCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL---- 356 (390)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 4433 3334444444443 466677776667777788888766 68899999999999999999999999999986
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHhccCC
Q 013312 403 APFNFPGFSIMCIGLASMVAFIQSLMMSHT 432 (445)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (445)
++.. .+.+.+.+.+++++......++
T Consensus 357 ---g~~~-~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 357 ---GLSS-IGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred ---ChhH-HHHHHHHHHHHHHHHHHHHccc
Confidence 3333 3566666667766666655543
No 3
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.2e-36 Score=286.51 Aligned_cols=377 Identities=15% Similarity=0.118 Sum_probs=286.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
.+...+...+++.++.....+..|.+.+| ++.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 16 TIGLCFLVALLEGLDLQSAGVAAPRMAQE--------FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 34455566777788888888888888654 4667788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh--
Q 013312 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-- 166 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-- 166 (445)
++..++.+++.++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..+++.++..
T Consensus 88 ~~~~~~~~~~~~~~~---~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 163 (406)
T PRK11551 88 ALFGLFSLATAQAWD---FPSLLVARLLTGV-GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAA 163 (406)
T ss_pred HHHHHHHHHHHHhcc---HHHHHHHHHHHHh-hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999 9999999999999 8888889999999999999999999999999999999999888754
Q ss_pred --hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhc
Q 013312 167 --LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (445)
Q Consensus 167 --~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (445)
.+||+.|++.+++.++..+.....+||++++.+++++. .++++..+..++. .+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~-~~ 218 (406)
T PRK11551 164 GDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAG------------------------KQRAPVLRALFGE-GR 218 (406)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcc------------------------hhhhhhHHHHhhh-hh
Confidence 48999999888776666666666788865432221000 0000001111111 11
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 013312 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (445)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (445)
++..+......+...........+.|.|+++ .|+++.+.+.......++.+++. +..+++.||+++|+.+..+.....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~ 296 (406)
T PRK11551 219 ATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGS-LLIGALMDRLRPRRVVLLIYAGIL 296 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHH
Confidence 1222233333444444555667788999987 69999999999999999999988 888999999999998887777776
Q ss_pred HHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 013312 325 INMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 403 (445)
Q Consensus 325 ~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~ 403 (445)
++.+.+...++.+.... ..+.+++.....+...++..|.+|+++||++.|+.+....++..++|.+.|.+.++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~----- 371 (406)
T PRK11551 297 ASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG----- 371 (406)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC-----
Confidence 66666666665554444 355677777778888999999999999999999999999999999999999999864
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 404 PFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
+.....+.....+.+++....+...+
T Consensus 372 --~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 372 --RSTVGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22223344444445555555444433
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=3.7e-36 Score=286.27 Aligned_cols=392 Identities=12% Similarity=0.085 Sum_probs=275.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHH
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (445)
....++..+..+++.....+.+|.+.++ ++.+..+.|++.+.+.+++.+++++.|+++||+|||+++.++.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~ 96 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEMLAD--------LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHH
Confidence 3445556666666666777888888643 46777889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh---
Q 013312 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF--- 166 (445)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~--- 166 (445)
+.+++.++++++++ ++.+++.|++.|+ +.|...+...+++.|++|+++|++++++.+...++|..++|.+++.
T Consensus 97 ~~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 97 ATGIINILFGFSSS---LWAFALLWVLNAF-FQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999 7787788999999999999999999999999999999999887765
Q ss_pred -hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHH-Hhhc
Q 013312 167 -LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC-LLRS 244 (445)
Q Consensus 167 -~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 244 (445)
++||+.|++.+++.++..+...+.+||+|++.....+.+. +++ +++.++ +. .++..+.++.++ ...+
T Consensus 173 ~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~-----~~~---~~~~~~--~~-~~~~~~~~~~~~~~~~~ 241 (434)
T PRK11663 173 HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEW-----RHD---ALELAQ--QQ-EGAGLSRKEILTKYVLL 241 (434)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccc-----ccc---ccccch--hc-cccCCChhhhHHHHHhc
Confidence 4999999998877666655555677876543221110000 000 000000 00 000112233222 2456
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh--cchhHH-HH---
Q 013312 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLL-SL--- 318 (445)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~-~~--- 318 (445)
++.++...+..++..........++|.|+++.+|+++.+.+...+...++..++. +..|++.||+ ++|+.. ..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~r~~~~~~~~~ 320 (434)
T PRK11663 242 NPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGA-LVAGWGSDKLFNGNRGPMNLIFAA 320 (434)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-HHHhhhHHHhccCCccHHHHHHHH
Confidence 6777776666666666677778899999987789999999999999999999998 8889999998 333322 21
Q ss_pred HHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 319 GLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
+.....+...... ..+...... ....+++.............|..|+++||++.|+.+...++|..++|.+.|++.|+
T Consensus 321 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~ 399 (434)
T PRK11663 321 GILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI 399 (434)
T ss_pred HHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh
Confidence 1111111111111 122222111 22223222222233445678889999999999999999999999999999999997
Q ss_pred hhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCCC
Q 013312 398 FLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 434 (445)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (445)
. ++.. .+...+++.+++.+..+...|+++
T Consensus 400 ~-------g~~~-~f~~~~~~~~~~~~~~~~~~~~~~ 428 (434)
T PRK11663 400 W-------HWTG-FFVVISIAAGISALLLLPFLNAQA 428 (434)
T ss_pred c-------ccHH-HHHHHHHHHHHHHHHHHHHHhhhc
Confidence 6 4333 355566666565555554444433
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.4e-36 Score=286.80 Aligned_cols=376 Identities=12% Similarity=0.077 Sum_probs=273.5
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
++.+..+++..++.+++........|.+. +|++.+..+.|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~--------~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMG--------KDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhH--------hhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 45666677777788888888888888664 4557778899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
+.++.+++.+++++++| ++.+++.|+++|+ +.+...|...+++.|++|+++|++++++++...++|..+++.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 79 IMVLWGIASTATMFATG---PESLYLLRILVGI-AEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH-HHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999 8888889999999999999999999999999999999999888764
Q ss_pred ----------hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCc-CCccccchhhhcccccCCCCCCcccccccccchh
Q 013312 167 ----------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDD-DLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (445)
Q Consensus 167 ----------~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (445)
.+||+.|++.+++.++..++.++++||+|++.+.. ++.++..++..+.+..+ ..++. +...+.....
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~ 232 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLT-LEQPE-GAFAHAAMPQ 232 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhcccc-ccccc-cccccccccH
Confidence 38999999998887777666777889887543210 00000000000000000 00000 0000111111
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhh-cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchh
Q 013312 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ-FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (445)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (445)
++.++.++ ++.++...+..++.....+.+.+++|.|+++. .|+++.+.+.+.....++..++. +..++++||+++|+
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~-l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 233 RSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGM-IWWSRHSDRLKERK 310 (412)
T ss_pred HHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHH-HHHHHHhcccCccH
Confidence 22233343 35567667777777777888899999999872 46788888999999999999988 88899999998776
Q ss_pred H-HHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 013312 315 L-LSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (445)
Q Consensus 315 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 392 (445)
. .........++..+.....+...... ..+.+.+.....+.......|.+|+++|+++.|+.+...++|++++|.+.|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 311 HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 4 33344444444333222222222221 222233333333444455567889999999999999999999999999999
Q ss_pred HHHHhh
Q 013312 393 PLTALF 398 (445)
Q Consensus 393 ~l~~~~ 398 (445)
.+.|..
T Consensus 391 ~i~~~~ 396 (412)
T TIGR02332 391 ILKDAT 396 (412)
T ss_pred cccccC
Confidence 999876
No 6
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=268.41 Aligned_cols=378 Identities=14% Similarity=0.110 Sum_probs=294.8
Q ss_pred HhhhHHHHHHHHHHHHHH----HhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchh
Q 013312 7 IKTLSHLFVTVFLWGFAT----MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~ 82 (445)
+|..+.++++.++.+.++ .......|.+.+| .+++..+.|++.+++.+.+.++-.+.|.++||.+.|+
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~--------~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~ 95 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIED--------GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY 95 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce
Confidence 444445555555555544 4456667777644 3577789999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhh
Q 013312 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (445)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (445)
.+..++++.++.+++++++++ ++.+.+..+++|. ..|.-+|.....++.|++++|||+..++.+.+-++|..+.|.
T Consensus 96 fm~~gLilsai~nil~Gfs~s---~~~~~~l~~lng~-fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~ 171 (448)
T COG2271 96 FMAFGLILSAIVNILFGFSPS---LFLFAVLWVLNGW-FQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPL 171 (448)
T ss_pred eehHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHH-HhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHH
Confidence 999999999999999999999 9999999999999 889999999999999999999999999999999999988887
Q ss_pred hh--hh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhH
Q 013312 163 AA--RF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (445)
Q Consensus 163 l~--~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (445)
+. +. .+||..|++.++++++..++.++..+|+|+...-.+- ++.+++..+.. .++++.+....++
T Consensus 172 ~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~i-----e~~~~d~~e~~----~~~~~~~~ls~~~ 242 (448)
T COG2271 172 VALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPI-----EEYRGDPLEIY----EEEKENEGLTAWQ 242 (448)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCH-----HHhhcCchhhh----hhhccCCCccHHH
Confidence 77 54 3899999999999999999999999999876543211 11111100000 0011111122344
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh--cchh
Q 013312 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAK 314 (445)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 314 (445)
...+...+||.+|.+.+..++....-++++.|.|.|+.|..|+|..++++..+.+-.+++.+. ++.||++||+ |||.
T Consensus 243 i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~-Ll~GwlSDklfkgrR~ 321 (448)
T COG2271 243 IFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGT-LLAGWLSDKLFKGRRG 321 (448)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHH-HHHHHHHHHhcccccc
Confidence 556678899999999999999999999999999999999999999999999999999999999 8889999986 4554
Q ss_pred HH-HHHHHHHHHHHHHHHhcCCc-hhHHHH--HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHH-HHHHHHH
Q 013312 315 LL-SLGLFAACINMFICSISWSA-WVPYAT--TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANIVSPL 389 (445)
Q Consensus 315 ~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~i~~~ 389 (445)
.. ++.++...++.+.+...++. ..+... +..|+......-..-....|..|++..|++.|+...+.++ |.+.+..
T Consensus 322 p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~ 401 (448)
T COG2271 322 PMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGL 401 (448)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCC
Confidence 44 44455555556666666544 222223 4445555545545556679999999999999999999999 9999999
Q ss_pred HHHHHHHhhhcCCCCcccchhHHH
Q 013312 390 IFSPLTALFLSKGAPFNFPGFSIM 413 (445)
Q Consensus 390 ~~g~l~~~~~~~~~~~~~~~~~~~ 413 (445)
..|++.|.+ ++.+....
T Consensus 402 ~~g~i~d~~-------gW~g~Fi~ 418 (448)
T COG2271 402 PLGYIADTW-------GWDGGFIV 418 (448)
T ss_pred cceeeEecC-------CCcchHHH
Confidence 999998874 56665333
No 7
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=6.1e-36 Score=281.06 Aligned_cols=355 Identities=11% Similarity=0.022 Sum_probs=267.0
Q ss_pred HhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCc
Q 013312 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (445)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 104 (445)
....|.+|.+.+ |++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+.+++++|
T Consensus 26 ~~~~~~lp~i~~--------~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~- 96 (393)
T PRK09705 26 TSVGPLLPQLRQ--------ASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQ- 96 (393)
T ss_pred hccchhHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcc-
Confidence 556688888864 45777889999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh-----hchhhHHHHHHHH
Q 013312 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIV 179 (445)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-----~~w~~~f~~~~~~ 179 (445)
++.+++.|+++|+ +.+...+...+++.|++| ++|+++++.+..+...|..+|+.++.. .+||+.+.+.++.
T Consensus 97 --~~~ll~~r~l~Gi-g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 97 --SALLLSSALLGGV-GIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred --hHHHHHHHHHHHh-HHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999 888888899999999987 889999999998887777777766654 3799988766655
Q ss_pred HHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHH
Q 013312 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (445)
Q Consensus 180 ~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (445)
.++..+ .++...+.+++++++ ++ .+ . ++ ..+++..+...+..++..
T Consensus 173 ~~~~~~-~~~~~~~~~~~~~~~------------------------~~-~~---~-~~----~l~~~~~~~l~~~~~~~~ 218 (393)
T PRK09705 173 AVVALF-AWWWQSAREVASSHK------------------------TT-TT---P-VR----VVFTPRAWTLGVYFGLIN 218 (393)
T ss_pred HHHHHH-HHHHHhcCCCccccC------------------------CC-cC---C-cc----cccCHhHHHHHHHHHHHH
Confidence 443322 222222211110000 00 00 0 11 123344555555566666
Q ss_pred hhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhH
Q 013312 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVP 339 (445)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (445)
..+.....+.|.|+++ +|.++.+.+...+..+++.++++ +..+++.||.++|+....+..+..++...+...++....
T Consensus 219 ~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~-~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 296 (393)
T PRK09705 219 GGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGA-LLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHH-HHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 6777888999999987 79999999999999999999998 778999999999998888887777776655433322222
Q ss_pred HHHHHHHhhhhhhhhhHHHHHhcccC-CccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHH
Q 013312 340 YATTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLA 418 (445)
Q Consensus 340 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 418 (445)
....+.+++.+...|.......+..+ ++++|+..|+.+...+++..++|.+.|++.|+.+ .....+.+.+++
T Consensus 297 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g-------~~~~~~~~~~~~ 369 (393)
T PRK09705 297 LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG-------NYLMDWAFHALC 369 (393)
T ss_pred HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CchHHHHHHHHH
Confidence 22345567777777777766666664 6789999999999999999999999999999873 333345666666
Q ss_pred HHHHHHHHHhccCCCCC
Q 013312 419 SMVAFIQSLMMSHTPAS 435 (445)
Q Consensus 419 ~~~~~~~~~~~~~~~~~ 435 (445)
++.........+++++.
T Consensus 370 ~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 370 VVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHHHHhcccccc
Confidence 66666666666665543
No 8
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=6.8e-36 Score=279.22 Aligned_cols=351 Identities=15% Similarity=0.160 Sum_probs=284.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHH
Q 013312 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (445)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 90 (445)
+.++...++..++..+..+.+|.+..| .+.+..+.|++.+++.++..+++++.|+++||+|||+++..+..+
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~ 73 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLA--------GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLI 73 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHH--------hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHH
Confidence 346778889999999999999999865 356678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc-----CcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhh
Q 013312 91 SIIPLAILAYRR-----SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (445)
Q Consensus 91 ~~~~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (445)
.+++..+..+.+ + ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|.++||.+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~ 149 (365)
T TIGR00900 74 RAVLVAVLPFVALLGGLN---IWQVYVLAGILAI-AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGG 149 (365)
T ss_pred HHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999888888877 7 8999999999999 889999999999999999999999999999999999999998887
Q ss_pred h----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHH
Q 013312 166 F----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (445)
Q Consensus 166 ~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (445)
. .+||+.|++.++..++..+.. +.+++++++++++++. +++..++.++..+.
T Consensus 150 ~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~ 205 (365)
T TIGR00900 150 LMYATLGIKWAIWVDAVGFAISALLI-VSVRIPELAASEIQAL-----------------------SNAVLRDTREGIKF 205 (365)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHH-HhcccccCCCcccccc-----------------------chhHHHHHHhHHHH
Confidence 6 489999998877665554443 2333221111110000 00001122333445
Q ss_pred hhcchhhHHHHHHHHHHHhhhhhhH-HHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHH
Q 013312 242 LRSSVTLSQAAVVAFFSGLSEGGMQ-ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (445)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (445)
.+++|.++......++......... .+.|.|.++.+|.++.+.+.......++..++. +..+++.||.++|+.+..+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~ 284 (365)
T TIGR00900 206 VLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGA-LLLGLLGRYFKRMALMTGAI 284 (365)
T ss_pred HHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchhHHHHHHH
Confidence 6677878777777777766666665 788999988889999999999999999999988 77789999999999988887
Q ss_pred HHHHHHHHHHHhcCC-chhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 321 FAACINMFICSISWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.+.+++...+.+.++ .+.... .++.+++.+...+...++..|.+|+++||++.|+.+...+++..++|.+.|.+.|+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 285 FVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 777777777766654 444433 466788888889999999999999999999999999999999999999999999864
No 9
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1.3e-35 Score=279.02 Aligned_cols=370 Identities=14% Similarity=0.111 Sum_probs=281.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHH
Q 013312 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (445)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 90 (445)
.+++...++...+.....|.+|.+.+ ++.+.+..+.|++.+...+...+.+++.|+++||+|||+++..+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~ 85 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFV-------DQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLM 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHH
Confidence 66778888999999999999999875 34477788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh---
Q 013312 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--- 167 (445)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~--- 167 (445)
.+++.+.+.++++ ++.+++.|+++|+ +.+...|...+++.|++|+|+|++++++.+...++|..+||.+++.+
T Consensus 86 ~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~ 161 (400)
T PRK11646 86 RAAGFATMAIAHE---PWLLWLSCILSGL-GGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY 161 (400)
T ss_pred HHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998 8999999999999 77888899999999999999999999999999999999999988874
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchh
Q 013312 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (445)
Q Consensus 168 ~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (445)
+||+.|++.++..++..+...+..||.++++.+ . +.++.++...++|.
T Consensus 162 g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~----------------------------~----~~~~~~~~~~~~~~ 209 (400)
T PRK11646 162 DFRLVCATGAVLFVLAAAFNAWLLPAYKLSTVR----------------------------T----PVREGMTRVLRDKR 209 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccccccc----------------------------h----hhHHHHHHHHcCch
Confidence 899999998877666655554555553211000 0 01111222445565
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
++...+..+...........+.|.|.++.. .++.+.+.+.+..++..........++..||.+.++.+..+..+..++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 288 (400)
T PRK11646 210 FVTYVLTLTGYYMLAVQVMLMLPIMVNDIA-GSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSM 288 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 554444433333333334567899998854 4778889888888777766664554444456666666777777777777
Q ss_pred HHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 013312 328 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFN 406 (445)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~ 406 (445)
..+...++.+.... ..+++.+.+...|...++..+..|+++||+++|+.+....+|..+||.+.|++.|+.++. +
T Consensus 289 ~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~----~ 364 (400)
T PRK11646 289 FPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKAL----N 364 (400)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhc----C
Confidence 77766666554433 356677777888899999999999999999999999999999999999999999986332 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHh
Q 013312 407 FPGFSIMCIGLASMVAFIQSLM 428 (445)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~ 428 (445)
.....+...+.+.+++.+....
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~ 386 (400)
T PRK11646 365 QPELPWMMLGIIGLITLLALYW 386 (400)
T ss_pred CcchHHHHHHHHHHHHHHHHHH
Confidence 2333455555555555544443
No 10
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2e-36 Score=290.83 Aligned_cols=393 Identities=12% Similarity=0.065 Sum_probs=274.5
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHH
Q 013312 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (445)
Q Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~ 92 (445)
+++..++.+++.....+..|.+.+ +++++..+.|++.+++.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 34 ~~~~~~~~y~~r~~~~~~~~~i~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~ 105 (467)
T PRK09556 34 VFIGYLTMYLIRKNFKAAQNDMIS--------TYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSA 105 (467)
T ss_pred HHHHHHHHHHHhcChhhhhHHHHH--------hcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHH
Confidence 344445555667777788888764 457777899999999999999999999999999999999998888887
Q ss_pred HHHHHHHh-----hcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh-
Q 013312 93 IPLAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (445)
Q Consensus 93 ~~~~~~~~-----~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~- 166 (445)
+.....++ +++ ++.+++.|+++|+ +.+...|...++++|++|+++|++++|+.+...++|.++++.+...
T Consensus 106 ~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 106 ICMLGFGASLGSGSVS---LGLMIALWALSGF-FQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred HHHHHHHHHHhcccch---HHHHHHHHHHHHH-HHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence 77766655 577 9999999999999 8888889999999999999999999999999999999998877643
Q ss_pred ---h---chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHH-HH
Q 013312 167 ---L---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD-LI 239 (445)
Q Consensus 167 ---~---~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 239 (445)
. +||..|.+.+++.++..+..++..+++|++.+..++.+. ..+...+ ++ + +.+ +++.+.++ ..
T Consensus 182 ~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~----~~~~~~~-~~--~--~~~-~~~~~~~~~~~ 251 (467)
T PRK09556 182 ANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEI----FGEPISE-ED--K--ETE-STDMTKWQIFV 251 (467)
T ss_pred HHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhc----ccCccch-hh--h--ccc-cccCcHHHHHH
Confidence 1 588889888877776666666666766543222111000 0000000 00 0 000 00011122 22
Q ss_pred HHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 013312 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (445)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (445)
+...++|.++...+..++..........+.|.|+++.+|+|+.+.+.......++.+++. +..|+++||+++|+.....
T Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~g~r~~~~~~ 330 (467)
T PRK09556 252 EYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGS-LLWGWLSDLANGRRALVAC 330 (467)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCchHHHH
Confidence 335677888888888887777777788999999998899999999999998999998988 8889999999998876654
Q ss_pred HHHHHHHHHH--HHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHH-HHHHHHHHHHHHH
Q 013312 320 LFAACINMFI--CSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANIVSPLIFSPLT 395 (445)
Q Consensus 320 ~~~~~~~~~~--~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~i~~~~~g~l~ 395 (445)
.....++... +...++.+.... .++.|+..............|.+|++.+|++.|+.+...++ |..++|.+.|++.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~ 410 (467)
T PRK09556 331 IALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIA 410 (467)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHh
Confidence 4433333222 222233333322 23344333232333345677999999999999999999997 7799999999999
Q ss_pred Hh-hhcCC----CCcccchhHHHHHHHHHHHHHHHHHhc
Q 013312 396 AL-FLSKG----APFNFPGFSIMCIGLASMVAFIQSLMM 429 (445)
Q Consensus 396 ~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (445)
|. ..+.. ...++.. .|.+..++.+++.+..+.+
T Consensus 411 ~~~~~g~~~~~~~~~~~~~-~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 411 DPTKNGTPIFGYTLTGWAG-TFAALDIAAIGCICLMAIV 448 (467)
T ss_pred cccccccccccccccChHH-HHHHHHHHHHHHHHHHHHH
Confidence 92 11100 0112333 3455555556555555444
No 11
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=5.5e-35 Score=282.28 Aligned_cols=366 Identities=15% Similarity=0.100 Sum_probs=257.2
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHH-HHHHHHHHHHHhhhhccccccccCchhHhH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGF-QQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~-~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (445)
++.+....++.+++.++..++....|.+.++.. ++.++ ..+ ....+ ..++..+++.++++++|+++||+|||+++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~-~~~~~-~~~-~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 91 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFF-PGADP-SVQ-MIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILA 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCCc-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 445666678889999999999888887766542 22222 111 11111 358888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCcchhH--------HHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhh
Q 013312 86 LPLTLSIIPLAILAYRRSISFFY--------AYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF 157 (445)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 157 (445)
.+.++++++++++++++| ++ .+++.|+++|+ +.|..++...++++|++|+++|+++.++.+.+..+|.
T Consensus 92 ~~~~l~~i~~~~~a~~~~---~~~~g~~a~~~l~~~R~l~G~-g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~ 167 (490)
T PRK10642 92 ITIVIMSISTFCIGLIPS---YATIGIWAPILLLLCKMAQGF-SVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGF 167 (490)
T ss_pred HHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHh-HhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999 65 38999999999 8899999999999999999999999999998888888
Q ss_pred hhhhhhh----h--------hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcc
Q 013312 158 VCGTLAA----R--------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVK 225 (445)
Q Consensus 158 ~~g~~l~----~--------~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (445)
.+|+.+. . .+|||++|++.+++.++. ++....+||+|+..+++++.+ +.. ++.
T Consensus 168 ~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~~~~~~~~-------~~~-~~~------ 232 (490)
T PRK10642 168 VLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQQHVDKLE-------QGD-REG------ 232 (490)
T ss_pred HHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHHHHHHhhh-------hhc-ccc------
Confidence 7776443 2 258999999987665543 444567888765322110000 000 000
Q ss_pred cccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 013312 226 IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL 305 (445)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 305 (445)
..++++.++++.++. +.+.+.......++....++....+.|.|+++.+|++..+.+.......++..++. +..++
T Consensus 233 -~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~ 308 (490)
T PRK10642 233 -LQDGPKVSFKEIATK--HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQ-PVMGL 308 (490)
T ss_pred -ccccccCCHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 000111233433221 11222222333344556677778899999988789998887777777777787877 77899
Q ss_pred hhhhhcchhHHHHHHHHHHHHH-HHHH--hcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHH
Q 013312 306 LAPILGEAKLLSLGLFAACINM-FICS--ISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS 381 (445)
Q Consensus 306 l~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 381 (445)
++||+|||+.+..+.+...+.. ..+. ..++...++.. .+.+++.+...+....+..+.+|++.||++.|..+....
T Consensus 309 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~ 388 (490)
T PRK10642 309 LSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISV 388 (490)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHH
Confidence 9999999998877765433322 2122 22233333332 445555556666677788899999999999998777777
Q ss_pred HHHHHHHHHHHHHHHhh
Q 013312 382 FANIVSPLIFSPLTALF 398 (445)
Q Consensus 382 ~g~~i~~~~~g~l~~~~ 398 (445)
+++.++|.+.|++.+..
T Consensus 389 ~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 389 LVAGLTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88889999999998764
No 12
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=9.7e-36 Score=287.70 Aligned_cols=379 Identities=16% Similarity=0.096 Sum_probs=297.1
Q ss_pred hhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHh
Q 013312 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (445)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (445)
+++..+..+.+..++..++..++...+|.+.+| ++.+..+.+|+.+.+.++...+.+++|+++||+|||+++
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~--------l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l 74 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMT--------LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL 74 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 344567788889999999999999999999754 466667889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCC-CccchhhHHHHHHHHHhhhhhhhhhh
Q 013312 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLA 163 (445)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (445)
+.+..+.+++++++++++| ++.++++|+++|+ +.+...|.....+.+.+ |+++|++++++......+|..+||.+
T Consensus 75 ~~~~~~~~~~~~~~~~a~~---~~~li~~r~l~G~-g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~l 150 (495)
T PRK14995 75 MLGGTLFGLASLAAAFSPT---ASWLIATRALLAI-GAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLV 150 (495)
T ss_pred HHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 9999999999999 88888888888787765 67999999999999999999999999
Q ss_pred hhhh----chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhh--------hcccccCCCCCCc-------
Q 013312 164 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEE--------TEGVNQNESNSPV------- 224 (445)
Q Consensus 164 ~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~------- 224 (445)
++.+ +||+.|++...+.++..++..+.+||++++++++.|..+..... .-....+.+....
T Consensus 151 gg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 230 (495)
T PRK14995 151 GGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLL 230 (495)
T ss_pred HHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 8874 89999999988888777777777887654332222222211000 0000000110000
Q ss_pred ---------ccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHH
Q 013312 225 ---------KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAG 295 (445)
Q Consensus 225 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 295 (445)
...+.+.+++..+ ++ ++++|.+....+..++......+...+.|.|+++.+|+|+.+.|.......++.
T Consensus 231 ~~~~~l~~f~~~e~~~~~p~~~-~~-lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~ 308 (495)
T PRK14995 231 TGALLLGLFIRTQLAASRPMID-MR-LFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVAS 308 (495)
T ss_pred HHHHHHHHHHHHHhcCCCCCcC-HH-HhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 0001111122222 12 456777777777777777777778889999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc---CCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchh
Q 013312 296 TISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGK 371 (445)
Q Consensus 296 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 371 (445)
.++. ++.|++.||+++|+.+..+..+..++...+... ++.+.... ..+.|++.+...+.......+.+|+++++.
T Consensus 309 ~~~~-~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~ 387 (495)
T PRK14995 309 GFSG-PIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAA 387 (495)
T ss_pred HHHH-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcch
Confidence 9988 888999999999999888888877776655432 23333333 467788888888888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 372 AQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 372 ~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+.++.++.+++|+.+|+.+.|.++++.
T Consensus 388 ~~~~~~~~~~lG~~~G~ai~g~i~~~~ 414 (495)
T PRK14995 388 AGAIETMAYELGAGLGIAIFGLLLSRS 414 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998753
No 13
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.9e-35 Score=279.39 Aligned_cols=376 Identities=13% Similarity=0.101 Sum_probs=286.0
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
++.+..++...++..++..+..+.+|.+.++. +.+..+.|++.+.+.++..+++++.|+++||+|||+++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 16 HPAFRAVFIARFISIFGLGLLGVAVPVQIQMM--------TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL 87 (417)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence 45566777788899999999999999998653 4456789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-----hcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhh
Q 013312 87 PLTLSIIPLAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (445)
Q Consensus 87 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (445)
+..+.+++....+. .++ ++.+++.|++.|+ +.+...+...+++.|+.|+++|+++.++.+...++|..+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 163 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFLPEPS---LLAIYLLGLWDGF-FGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP 163 (417)
T ss_pred hHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH-HHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence 88888777665542 345 7888999999999 77888888999999999999999999999999999999999
Q ss_pred hhhhhh----chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHH
Q 013312 162 LAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (445)
Q Consensus 162 ~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (445)
.+++.+ +|++.|++.++..++..+. .+.+||++++++++ ++..++.++
T Consensus 164 ~l~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~---------------------------~~~~~~~~~ 215 (417)
T PRK10489 164 ALGGLLIAAGGVAWNYGLAAAGTFITLLP-LLRLPALPPPPQPR---------------------------EHPLRSLLA 215 (417)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhCCCCCCCCccc---------------------------ccchHHHHH
Confidence 988763 8999998887776555443 45667653321110 000112233
Q ss_pred HHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHH
Q 013312 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (445)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (445)
.++..+++|.++...+..++... ......++|.|.++.+|.++.+.|++.+..+++.+++. ++.+++.||.++++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~~~l~~~~~~~~~l~ 293 (417)
T PRK10489 216 GFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA-LTSGWLAHSARPGLLML 293 (417)
T ss_pred HHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH-HHHHHhhhccCcchHHH
Confidence 34445566666555544444332 34567789999998889999999999999999999988 77889999977777888
Q ss_pred HHHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 318 LGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
.+..+..++.+.+.+.++.+.... ..++|++.+...+...+++.|..|++.||+++|+.+...++|..+||.+.|++.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~ 373 (417)
T PRK10489 294 LSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA 373 (417)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence 887777777777666665544333 3566777777778888899999999999999999999999999999999999999
Q ss_pred hhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 397 LFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
.. +.........++..+++.+.....++
T Consensus 374 ~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 374 MM-------TPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred Hh-------chhhHHHHHHHHHHHHHHHHHHhccc
Confidence 86 33333233333444444444444443
No 14
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=5.4e-35 Score=274.03 Aligned_cols=370 Identities=14% Similarity=0.090 Sum_probs=277.0
Q ss_pred chhhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchh
Q 013312 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82 (445)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~ 82 (445)
|++++|.++.++.+.++..++.++..|.+|.+.+| ++.+..+.|++.+.+.++..+++++.|+++||+|||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--------~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~ 72 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ--------EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR 72 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46778889999999999999999999999999864 3666788999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhh
Q 013312 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (445)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (445)
++..+.++.+++...++++++ ++.+++.|+++|+ +.+...|...+.+.|..++++|+++++..+...++|..+||.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 148 (381)
T PRK03633 73 SYYLASLIFAAGCAGLGLMVG---FWSWLAWRFVAGI-GCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQL 148 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 9999999999999 888888888888889999999999999999999999999999
Q ss_pred hhhhhch---hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHH
Q 013312 163 AARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (445)
Q Consensus 163 l~~~~~w---~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (445)
+++.+.. +...+..+......... ...+.+++++++ + +..+.++
T Consensus 149 ~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------------------------~---~~~~~~~-- 195 (381)
T PRK03633 149 LVSKVSTELMSVLPWVTGLVLAAILPL--LFTRILNQQAEN--------------------------H---DSTSIWP-- 195 (381)
T ss_pred HHhcccccccchHHHHHHHHHHHHHHH--HHhcccCCCCCC--------------------------C---CCCCHHH--
Confidence 9887522 22233333222222111 112221111000 0 0011222
Q ss_pred HHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 013312 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (445)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (445)
..++|.++......+...........++|.|.++ .|.++.+.+...+...+..++++ +..+++.||+++|+.+..+
T Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~~~~~~l~~~ 271 (381)
T PRK03633 196 --MLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQ-WPIGRLADRFGRLLVLRVQ 271 (381)
T ss_pred --HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHcCcHHHHHHH
Confidence 2344445444333444444555667789999987 69999999999999999999988 7779999999999988888
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013312 320 LFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (445)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 399 (445)
.....++..... ..........+.+.+.....|...+...|..|+++++...+..+...++|..++|.+.|++.|+.
T Consensus 272 ~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~- 348 (381)
T PRK03633 272 VFVVILGSIAML--SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY- 348 (381)
T ss_pred HHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 777776655443 22222223355566666678999999999999888888888888889999999999999999986
Q ss_pred cCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 400 SKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
++.. .+.+.+.+.++.....++.++
T Consensus 349 ------g~~~-~f~~~~~~~l~~~~~~~~~~~ 373 (381)
T PRK03633 349 ------SDNL-LFIMIASVSFIYLLMLLRKAG 373 (381)
T ss_pred ------CccH-HHHHHHHHHHHHHHHHHhccC
Confidence 3222 355555555555544444433
No 15
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=3.1e-35 Score=288.95 Aligned_cols=395 Identities=15% Similarity=0.134 Sum_probs=284.2
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHH
Q 013312 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (445)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 91 (445)
.+.++.+...+....+.+.+|.+..+ ++++..+.+++.+++.++.+++++++|+++||+|||++++++.++.
T Consensus 171 i~~l~~~~~g~d~~~is~ilp~i~~~--------~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 171 VLGLALMADGVEVFVVGFVLPSAEKD--------LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34444555556666677788877643 4566678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh-----
Q 013312 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----- 166 (445)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----- 166 (445)
+++.++++++++ ++.++++|++.|+ +.+...|...+++.|++|+++|++.++++...+.+|.++++.++..
T Consensus 243 ~i~~ll~afa~s---~~~llv~R~l~G~-g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~ 318 (742)
T TIGR01299 243 GFFAFFSSFVQG---YGFFLFCRLLSGF-GIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY 318 (742)
T ss_pred HHHHHHHHHHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 9999999999999 8888889999999999999999999999999999999888865432
Q ss_pred ------------hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCc---CCccccchhhhcccccCC------------
Q 013312 167 ------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDD---DLTRPIITEETEGVNQNE------------ 219 (445)
Q Consensus 167 ------------~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~~~~~~~~------------ 219 (445)
.+||+.+++.++..++. ++..+++||+|+....+ ++..+.+.+....+....
T Consensus 319 G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~ 397 (742)
T TIGR01299 319 GWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHI 397 (742)
T ss_pred cchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHH
Confidence 26899998888776554 45567899998753222 222222222111110000
Q ss_pred -----CC-----CCcccccc-----cccc----hhHHHHHHhhcc---hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhh-
Q 013312 220 -----SN-----SPVKIPVC-----KKIP----SIRDLICLLRSS---VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ- 276 (445)
Q Consensus 220 -----~~-----~~~~~~~~-----~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 276 (445)
+. ++...... +... .+.+ ++.++++ +..+.+.+..+...+.++++..|+|..+++.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~ 476 (742)
T TIGR01299 398 KTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGN-FLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQ 476 (742)
T ss_pred HHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHH-HHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000000 0000 0011 1122232 3345566777888888999999999876441
Q ss_pred ---c-----------------CCch-------------------------------------------------------
Q 013312 277 ---F-----------------HFNK------------------------------------------------------- 281 (445)
Q Consensus 277 ---~-----------------g~~~------------------------------------------------------- 281 (445)
+ +++.
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 556 (742)
T TIGR01299 477 ADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLF 556 (742)
T ss_pred HHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhc
Confidence 0 0000
Q ss_pred --------------------------------------hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 013312 282 --------------------------------------NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (445)
Q Consensus 282 --------------------------------------~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (445)
........+.+++.+++. ++.++++||+|||+++..+.++.
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~-il~g~L~Dr~GRr~~l~~~~~ls 635 (742)
T TIGR01299 557 ENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGN-IVSALLMDKIGRLRMLAGSMVLS 635 (742)
T ss_pred cccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHH
Confidence 011233455667777877 88899999999999999999999
Q ss_pred HHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013312 324 CINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 402 (445)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~ 402 (445)
+++.+++.+.++.+..+. .++.+++.+...+....+++|.+|++.|++++|+.+....+|.+++|.+.|.+.+..
T Consensus 636 ai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~---- 711 (742)
T TIGR01299 636 CISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT---- 711 (742)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----
Confidence 998888887766544443 355677777788889999999999999999999999999999999999999887742
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013312 403 APFNFPGFSIMCIGLASMVAFIQSLMMS 430 (445)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (445)
...++++.+++.+++.+..+.++
T Consensus 712 -----~~~pf~i~a~~lll~~ll~~~LP 734 (742)
T TIGR01299 712 -----KAAPILFASAALACGGLLALKLP 734 (742)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHhCC
Confidence 23356666666677666666663
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.2e-34 Score=270.22 Aligned_cols=335 Identities=12% Similarity=0.143 Sum_probs=256.4
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHH
Q 013312 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP 94 (445)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 94 (445)
...+..........+.+|.+.+ +++.+..+.|+..+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 27 ~~~~~~~~~~~~~~~~l~~~~~--------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~ 98 (394)
T PRK10213 27 FCVACLIIVEFLPVSLLTPMAQ--------DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLS 98 (394)
T ss_pred HHHHHHHHHHHHHHhhHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH
Confidence 3333344444455667787754 45777889999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hchh
Q 013312 95 LAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTT 170 (445)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~ 170 (445)
.+++.++++ ++.+++.|+++|+ +.+...|...+++.|++|+|+|++++++.....++|..+||.+++. ++||
T Consensus 99 ~~~~~~~~~---~~~l~~~r~l~G~-~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~ 174 (394)
T PRK10213 99 CLLVSFANS---FSLLLIGRACLGL-ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWR 174 (394)
T ss_pred HHHHHHHCh---HHHHHHHHHHHHH-hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 999999999 9999999999999 8888889999999999999999999999999999999999988876 4999
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHH
Q 013312 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQ 250 (445)
Q Consensus 171 ~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (445)
+.|++.+++.++..+......||+++++++ .. ++.++ ..++|.++.
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~------------------------------~~---~~~~~-~l~~~~~~~ 220 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPSLPGEPSH------------------------------QK---QNTFR-LLQRPGVMA 220 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCccccc------------------------------ch---hHHHH-HhcCHHHHH
Confidence 999998877766555544456664321100 00 11122 345666666
Q ss_pred HHHHHHHHHhhhhhhHHHH-HHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHH
Q 013312 251 AAVVAFFSGLSEGGMQASF-LYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (445)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (445)
..+..++..........++ |.|.+ ++|+++.+.+......+++.+++. ++.+++.||.+++..............++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~iig~-~~~~~l~~r~~~~~l~~~~~~~~~~~~~l 298 (394)
T PRK10213 221 GMIAIFMSFAGQFAFFTYIRPVYMN-LAGFGVDGLTLVLLSFGIASFVGT-SLSSFILKRSVKLALAGAPLVLAVSALVL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 5555555555555556666 55554 579999999999999999999998 78899999965443344333334443444
Q ss_pred HHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 330 CSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 330 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
....++.+.... ..+.|++.+...+...+.+++..| +++++..+......++|..+||.+.|+++|..
T Consensus 299 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~ 367 (394)
T PRK10213 299 TLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNI 367 (394)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444455554444 466788888889999989988887 56778888888888999999999999999975
No 17
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=6.6e-35 Score=275.62 Aligned_cols=372 Identities=11% Similarity=0.126 Sum_probs=276.4
Q ss_pred hhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHh
Q 013312 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (445)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (445)
|+++.+..+.+..++..++.++..|.+|.+.++ +++.+..+.|++.+++.+++.+++++.|+++||+|||+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~-------~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHD-------QLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV 84 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH
Confidence 456778889999999999999999999998753 3466778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc---Cc--chhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhh
Q 013312 85 TLPLTLSIIPLAILAYRR---SI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159 (445)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~---~~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 159 (445)
..+.++.+++.+.+.++. +. ..++.+++.|+++|+ +.+...+...+++.|+.|+|+|++++++.+.....|..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 163 (399)
T PRK05122 85 VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGI-GESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI 163 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHh-hHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH
Confidence 999998888776665532 21 016688999999999 888888999999999999999999999999988889888
Q ss_pred hhhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchh
Q 013312 160 GTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (445)
Q Consensus 160 g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (445)
||.+++. .+|++.+++..++.++..+.. ...|+++ +++ +++.+.
T Consensus 164 g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~----------------------------~~~~~~ 211 (399)
T PRK05122 164 GAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRPAVP---PVK----------------------------GERLPF 211 (399)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCCCCC---CCC----------------------------ccchhH
Confidence 8888765 489998887666544332221 1112111 000 000012
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhH
Q 013312 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (445)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (445)
++..+. .+.......+..........+.|.|.++ .|++ +.+.......++.+++. +..+++.||+++|+.
T Consensus 212 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~ 281 (399)
T PRK05122 212 RRVLGR------VWPYGMGLALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGAR-LLFGNLINRLGGLRV 281 (399)
T ss_pred HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHH-HHHHHHHHHhccHHH
Confidence 221111 1111222233344555666788888876 4663 34566677778888877 777999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 316 LSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 394 (445)
+..+..+..++...+...++.+.... ..+.|++.+...+.......|..|+++||++.|+.+...++|..++|.+.|.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 361 (399)
T PRK05122 282 AIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLV 361 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888777777666554444 36678888888888888888999999999999999999999999999999999
Q ss_pred HHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCCC
Q 013312 395 TALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 434 (445)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (445)
.++. ++.. .+.+.+++.+++.+.....+++++
T Consensus 362 ~~~~-------g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 362 ASWF-------GYPS-IFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHc-------CHHH-HHHHHHHHHHHHHHHHHHhccccc
Confidence 9875 3322 455666666666666666655444
No 18
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.5e-35 Score=280.17 Aligned_cols=380 Identities=16% Similarity=0.146 Sum_probs=276.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHH
Q 013312 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (445)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~ 97 (445)
++..++...+.+..|.+.+ +++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~--------~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 75 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQE--------DLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGL 75 (399)
T ss_pred hHHHHHHHhhhHhHHHHHH--------hhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHH
Confidence 3455666667777777653 44667788999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hchhhHH
Q 013312 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAF 173 (445)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f 173 (445)
++++++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|++++++.+...++|..++|.+++. .+||+.|
T Consensus 76 ~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 151 (399)
T TIGR00893 76 QAFAGA---YVSLYILRVLLGA-AEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAF 151 (399)
T ss_pred HHHHcC---HHHHHHHHHHHHH-HHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHH
Confidence 999999 9999999999999 8888899999999999999999999999999999999999988875 4899999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHH
Q 013312 174 QAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAV 253 (445)
Q Consensus 174 ~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (445)
++.+++.++..+...+..||++++++..++.++... .+. ...+. +.+++..+.... .+...++|.++...+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 222 (399)
T TIGR00893 152 IIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIV--VGG--LLAEQ-QGKGPSTPKKYQ----IKELLKDRRVWGLAL 222 (399)
T ss_pred HHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhc--chh--hcccc-ccccccCCCccc----hHHHhcCHHHHHHHH
Confidence 998888777666666667776543322111100000 000 00000 000011111112 222456677887788
Q ss_pred HHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchh--HHHHHHHH--H--HHHH
Q 013312 254 VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK--LLSLGLFA--A--CINM 327 (445)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~--~--~~~~ 327 (445)
..++..........+.|.|+++.+|.++.+.+.......+..+++. +..+++.||+++|+ ........ . ..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
T TIGR00893 223 GQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGM-ILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSL 301 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Confidence 8888888888889999999998899999999999999999999988 78899999999886 11111111 1 0111
Q ss_pred HHHHh--cCCchhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 013312 328 FICSI--SWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 405 (445)
Q Consensus 328 ~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 405 (445)
..... .++.+........+.+.....+...++.+|.+|+++||++.|+.+...++|..++|.+.|.+.|..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~------- 374 (399)
T TIGR00893 302 LMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT------- 374 (399)
T ss_pred HHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC-------
Confidence 11111 122233333333333333378899999999999999999999999999999999999999999875
Q ss_pred ccchhHHHHHHHHHHHHHHHH
Q 013312 406 NFPGFSIMCIGLASMVAFIQS 426 (445)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~ 426 (445)
+.....+.+.+++.+++.+..
T Consensus 375 g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 375 GSFAGALMVVAALALIGALSY 395 (399)
T ss_pred CchhHHHHHHHHHHHHHHHHH
Confidence 212223455555555544443
No 19
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=6.7e-34 Score=270.80 Aligned_cols=388 Identities=13% Similarity=0.119 Sum_probs=264.7
Q ss_pred hHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhH
Q 013312 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (445)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (445)
+++.....++..+++.++......+.|.+..+..-++.++. ..........++..++..+++++.|+++||+|||+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~ 98 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHH
Confidence 34556667778888999998888877766554321122221 11111122334566788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCcchhH--------HHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhh
Q 013312 86 LPLTLSIIPLAILAYRRSISFFY--------AYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF 157 (445)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 157 (445)
.+.+++++++++++++++ ++ .+++.|+++|+ +.|..+|....++.|++|+++|++..+..+.+..+|.
T Consensus 99 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~ 174 (438)
T PRK09952 99 LTVWMMGIATALIGLLPS---FSTIGWWAPVLLVTLRAIQGF-AVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGL 174 (438)
T ss_pred HHHHHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHh-hhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999 65 58899999999 8898889999999999999999999999999999998
Q ss_pred hhhhhhhh------------hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcc
Q 013312 158 VCGTLAAR------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVK 225 (445)
Q Consensus 158 ~~g~~l~~------------~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (445)
++++.+.. .++||++|++.+++.++. +......||+++..+++++ .++.
T Consensus 175 ~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~-------------~~~~----- 235 (438)
T PRK09952 175 LLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHE-------------QAAA----- 235 (438)
T ss_pred HHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhh-------------cccc-----
Confidence 88765432 358999999888765443 3333455665532111100 0000
Q ss_pred cccccccchhHHHHHHhhcchhhHHH-HHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 013312 226 IPVCKKIPSIRDLICLLRSSVTLSQA-AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMP 304 (445)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 304 (445)
+++.+.. +.++++|+.+.. ....++.....+....+.|.|.++.+|++...........+....++. +..|
T Consensus 236 ----~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~-~~~g 307 (438)
T PRK09952 236 ----KKRIPVI---EALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTI-PCFA 307 (438)
T ss_pred ----cccCCHH---HHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 0000111 113334444333 334444555666778899999988889988765555556666667776 7779
Q ss_pred HhhhhhcchhHHHHHHHHHHHHHHHHHh---cCC-chhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHH
Q 013312 305 LLAPILGEAKLLSLGLFAACINMFICSI---SWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGI 379 (445)
Q Consensus 305 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 379 (445)
+++||++||+.+..+.++..++...+.. ..+ .+.... ..+.+++.+...+..+++..|.+|++.|+++.|+.+..
T Consensus 308 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~ 387 (438)
T PRK09952 308 WLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQV 387 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHH
Confidence 9999999999888776665544332222 222 222222 24446677777888889999999999999999987666
Q ss_pred H-HHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 380 S-SFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 380 ~-~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
. .+++.++|.+.|++.+..++ .+ ...+...+++.+++.+..+..++
T Consensus 388 ~~~lgg~~~p~i~g~l~~~~~~-----~~-~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 388 ASVVGGGFTPFIAAALVTYFGG-----SW-HSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-----Cc-hHHHHHHHHHHHHHHHHHHHccc
Confidence 5 48999999999999886421 11 12344455555666666555543
No 20
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=4.6e-34 Score=270.95 Aligned_cols=381 Identities=16% Similarity=0.188 Sum_probs=286.6
Q ss_pred hhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHh
Q 013312 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (445)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (445)
+|++.+..+++..++..++.++..|.+|.+.+|. +.++.+......|++.+++.++..+++++.|+++||+|||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 87 (408)
T PRK09874 11 NWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQL---GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML 87 (408)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHh---CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH
Confidence 4677788888999999999999999999998763 2222222234569999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh
Q 013312 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (445)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (445)
..+.+..+++.+++.+.++ ++.+++.|++.|+ +.+ ..+...+++.|..|+++|++++++......+|..++|.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (408)
T PRK09874 88 LRSALGMGIVMVLMGLAQN---IWQFLILRALLGL-LGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAG 162 (408)
T ss_pred HHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHH-hhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888 9999999999999 655 4577888999999999999999999999999999998888
Q ss_pred hh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHH
Q 013312 165 RF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (445)
Q Consensus 165 ~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (445)
+. .+||+.|++.+++.++..+...+.+||++++.+++ +..+.++..+
T Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~ 213 (408)
T PRK09874 163 GLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK-----------------------------EMLHMREVVT 213 (408)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccch-----------------------------hhhHHHHHHH
Confidence 75 48999999998887777666666677654221111 0001122233
Q ss_pred HhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchh---hHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHH
Q 013312 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (445)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (445)
.+++++..+......+...........+++.|..+..+.... ..+.+....+++..++. +..+++.||+++|+.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~~~g~l~dr~g~~~~~~ 292 (408)
T PRK09874 214 SLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSA-PRLGKLGDRIGPEKILI 292 (408)
T ss_pred hCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccchhHH
Confidence 333333333233334444445555667788888775432221 23555566677777777 67789999999999998
Q ss_pred HHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 318 LGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
.+..+..++.+.....++.+..... .+.|++.+...+...+...+..|++++|+.++..+....+|..+||.+.|.+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~ 372 (408)
T PRK09874 293 TALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA 372 (408)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh
Confidence 8888777777766666666655443 667888888889999999999999999999999999999999999999999988
Q ss_pred hhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 397 LFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
.. ++.. .+.+.+++.+++.+..+...+
T Consensus 373 ~~-------g~~~-~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 373 NY-------GFRA-VFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred hc-------chhH-HHHHHHHHHHHHHHHHHHHHH
Confidence 75 3332 456666666666665554333
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=6.6e-35 Score=276.58 Aligned_cols=372 Identities=13% Similarity=0.146 Sum_probs=271.6
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
++.+..+++..+.+.++..+..+..|.+.++ ++.+..+.|++.+++.++..+++++.|.++||+|||+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~ 82 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGE--------FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVT 82 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 4556777888889999999999999988643 46677889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
+.++.+++.++++++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..+++.+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 83 SIVLFSAGTLACGFAPG---YITMFIARLVIGI-GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHh-hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999 8888889999999999999999999999999999999999988765
Q ss_pred h----c--hhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHH
Q 013312 167 L----S--TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (445)
Q Consensus 167 ~----~--w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (445)
+ + ||+.|++.++..++. +.....+||+++.++++++.+...+..++..+ ++. ..+. ..++...+..+
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~--~~~~~~~~~~~ 231 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAEDWKEKHAGKALVRTMVDILYG-GEH---RIAN--IVMTLAAAMVQ 231 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHhhhhhhhhhHHHHHhc-cch---hhhh--hhhhhhHHhhh
Confidence 3 4 999998876655443 34445677765422211111000000000000 000 0000 00000011011
Q ss_pred Hhhcc-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 013312 241 LLRSS-VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (445)
Q Consensus 241 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (445)
...++ +.+........+.+........++|.|+++.+|+++.+.+.+....+++.+++. +..+++.||+++|+.+..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~ 310 (405)
T TIGR00891 232 SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGG-CVFGFLGDWLGRRKAYVCS 310 (405)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchhhhHHH
Confidence 11111 112222333333344445566788999988899999999999999999999988 7889999999999988877
Q ss_pred HHHHHHHHH-HHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 320 LFAACINMF-ICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 320 ~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
.....+... .....++.+..... .+.++......+....+++|.+|+++||+++|+.+...+++..++|.+.|.+.|+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 311 LLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 765533322 23333344433333 4455556666777888899999999999999999999999999999999999998
Q ss_pred h
Q 013312 398 F 398 (445)
Q Consensus 398 ~ 398 (445)
.
T Consensus 391 ~ 391 (405)
T TIGR00891 391 L 391 (405)
T ss_pred c
Confidence 7
No 22
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=4.3e-34 Score=267.90 Aligned_cols=342 Identities=13% Similarity=0.158 Sum_probs=262.3
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (445)
+.++.+.+..+....+.....|.+|.+.+| ++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 74 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD--------VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFL 74 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH--------cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHH
Confidence 466778888889999999999999998754 466667899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh-
Q 013312 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (445)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~- 166 (445)
..+.+++.+++++++| ++.+++.|++.|+ +.+...+...+++.|+.|+++|+++++.......+|..+||.+++.
T Consensus 75 ~~~~~~~~~l~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 75 VALCVIGNAMFTLSSS---YLMLAIGRLVSGF-PHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred HHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence 9999999999999999 9999999999999 8888888888999999999999999999999999999999888765
Q ss_pred ---hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhh
Q 013312 167 ---LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (445)
Q Consensus 167 ---~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (445)
.+||+.|++.+++.++..+...+.+||.+++++. +.++.++.+
T Consensus 151 ~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~---------------------------------~~~~~~~~~- 196 (382)
T PRK10091 151 SQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG---------------------------------GLREQFHFL- 196 (382)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc---------------------------------CHHHHHHHh-
Confidence 4899999999988777666666667775321110 001112222
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (445)
+++..+......++..........+.+.|+++..|+++.+.+.+....+++.+++. +..+++.||+++|+.+..+..+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~~r~~~~~~~~~~~~~~ 275 (382)
T PRK10091 197 RSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGN-LLSGRLSGRYSPLRIAAVTDFII 275 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHh-HHHheeccccCchhHHHHHHHHH
Confidence 34444444444444444444455677788887789999999999999999999998 78899999999999988888887
Q ss_pred HHHHHHHHh-cCCchhHHH-HHHHHhhhhhhhhhHH-HHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 324 CINMFICSI-SWSAWVPYA-TTAFSVLVVFATPSFR-SIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 324 ~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.++.+.+.. .++.+.... ..+.+.+.....+... ....+..|++.++.+. .+...++|..+||.+.|.+.|..
T Consensus 276 ~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~ 351 (382)
T PRK10091 276 VLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLG 351 (382)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcc
Confidence 777655543 333333333 2344444443344333 3444444555555543 46778999999999999999975
No 23
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.1e-33 Score=269.24 Aligned_cols=378 Identities=12% Similarity=0.050 Sum_probs=255.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHH
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (445)
+....++.+++.++...+....|.+.+|....+.+ +.+..+.+.+.+...++..++++++|+++||+|||+++..+.+
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 101 (432)
T PRK10406 24 IVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNT--TTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVC 101 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 33445667888999988877777776654211112 2222344555566677777999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcch-----hHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh
Q 013312 90 LSIIPLAILAYRRSISF-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (445)
Q Consensus 90 ~~~~~~~~~~~~~~~~~-----~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (445)
++++++++++++++... +..+++.|+++|+ +.|..+|...++++|++|+++|+++.+..+.....|..+++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~ 180 (432)
T PRK10406 102 MMCFGSLVIACLPGYETIGTWAPALLLLARLFQGL-SVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV 180 (432)
T ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHh-hhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998311 2368999999999 88999999999999999999999999998888888877776543
Q ss_pred h------------hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCccccccccc
Q 013312 165 R------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (445)
Q Consensus 165 ~------------~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (445)
. ..|||++|++.+++.++. ++....+||+++.++++ .++.
T Consensus 181 ~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~~~~~~---------------------------~~~~ 232 (432)
T PRK10406 181 VVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQQETRA---------------------------LKEA 232 (432)
T ss_pred HHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCchHHHhh---------------------------hccc
Confidence 2 358999999988776554 33334556654321110 0001
Q ss_pred chhHHHHHHhhcchhhHHHHHHHHH-HHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 013312 233 PSIRDLICLLRSSVTLSQAAVVAFF-SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG 311 (445)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 311 (445)
.++++ ++++++.+...+...+ .....+....++|.|+++.+|++..+.+.......+...+++ .+.|+++||++
T Consensus 233 ~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~-~~~G~l~Dr~g 307 (432)
T PRK10406 233 GSLKG----LWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQ-PLIGALSDKIG 307 (432)
T ss_pred ccHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence 12333 3345555544443333 355667788899999988889999898888888888888887 66699999999
Q ss_pred chhHHHHHHHHHHHHHHHHH--h--cCCchhHHHHHH-HHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHH-HHH
Q 013312 312 EAKLLSLGLFAACINMFICS--I--SWSAWVPYATTA-FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANI 385 (445)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ 385 (445)
||+.+..+..+..+....+. . .++.+....... .....+...+....+.+|.+|++.|+++.|+.+...++ .+.
T Consensus 308 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~ 387 (432)
T PRK10406 308 RRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGG 387 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHh
Confidence 99877666554333322111 1 122222222222 22333334456677889999999999999999988765 344
Q ss_pred HHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 386 VSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 386 i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
..|.+.+.+ +.. +.....++..++..+++.+..+.+++
T Consensus 388 ~~p~~~~~l-~~~-------g~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 388 SAEYVALSL-KSI-------GMETAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HHHHHHHHH-HHh-------CCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 577777744 544 21222344455555555555555443
No 24
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=2.9e-34 Score=269.36 Aligned_cols=347 Identities=12% Similarity=0.118 Sum_probs=259.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (445)
|.++.++++.++..++..+.....+.+.+|. +.+..+.+++.+.+.+++.++.++.|+++||+|||++++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~ 74 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKEL--------HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIA 74 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHH
Confidence 3566788889999988777766666665442 44556789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh
Q 013312 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (445)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (445)
.++.+++.+.+.++.+ . ++.|+++|+ +.+...|+..+++.|++|+|+|++++++.+....+|.++||.+++.+
T Consensus 75 ~~~~~~~~~~~~~~~~---~---~~~r~l~G~-~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 75 NGIKLLGCLLMLFGIH---P---LLAYGLVGI-GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHHH---H---HHHHHHHHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888887766 4 678999999 88999999999999999999999999999999999999999999875
Q ss_pred ---chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhc
Q 013312 168 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (445)
Q Consensus 168 ---~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (445)
.|+..+.+.+...++. .+..+.+||++++++++++ +..+.....++..+.+++
T Consensus 148 ~~~~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~l~~ 203 (393)
T PRK11195 148 ADPHAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQSW-----------------------NPIALLRDFFHACRVLWR 203 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccCC-----------------------CHHHHHHHHHHHHHHHHh
Confidence 4555665555443333 3344667775432211100 000000111222334556
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 013312 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (445)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (445)
+|.+........+............|.|+++.+|.++.+.|+.....+++.++++ +..+++.||.++++.+..+.. .+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~-~~~~~l~~~~~~~~~~~~g~~-~~ 281 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA-GAAARLVTLETVLRVLPAGIL-MG 281 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH-HHHHHHhcCCcccchHHHHHH-HH
Confidence 6666555544444445555566777888988899999999999999999999998 777899999888887777753 33
Q ss_pred HHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCcc-chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 325 INMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE-QGKAQGCISGISSFANIVSPLIFSPLT 395 (445)
Q Consensus 325 ~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~ 395 (445)
+....+.+.++.+.... ..+.|++.+...+..++..++..|++. +|++.++.+..++++..++..+.+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 282 LVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 43444444455443333 356788888888888888888766554 799999999999999999999998663
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2.9e-34 Score=265.43 Aligned_cols=352 Identities=13% Similarity=0.047 Sum_probs=256.7
Q ss_pred HHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHH
Q 013312 19 LWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL 98 (445)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 98 (445)
.+......+.|.+|.+.+| ++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+......+....
T Consensus 2 ~~~~~~~~~~~~lp~i~~~--------~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 73 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAED--------IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL 73 (368)
T ss_pred hhhHHHHHHHhhHHHHHHH--------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 3456677788999999754 47777899999999999999999999999999999998776655555544333
Q ss_pred HhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh----chhhHHH
Q 013312 99 AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQ 174 (445)
Q Consensus 99 ~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~ 174 (445)
...++ ++.+++.|+++|+ +.+.. +.....++|++|+++|++++++.+.+..+|.++++.++..+ +||+.|+
T Consensus 74 ~~~~~---~~~l~~~R~l~G~-g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~ 148 (368)
T TIGR00903 74 LDPFN---YEWLLACQLLAAL-GQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLII 148 (368)
T ss_pred HHhcc---HHHHHHHHHHHHh-HhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 33367 9999999999999 77764 56667779999999999999999999999999998877764 9999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHH
Q 013312 175 AATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVV 254 (445)
Q Consensus 175 ~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (445)
+.++++++..++.++.+||+|++++++ .+. . +..++ ++.+.++|.++...+.
T Consensus 149 ~~~~l~~~~~~~~~~~lp~~p~~~~~~-----------------------~~~-~---~~~~~-~~~ll~~~~~~~~~~~ 200 (368)
T TIGR00903 149 PIAAVAAAGIILVLAALPALPFQAAEG-----------------------FGF-K---DAVKE-FGALAGRKDLWIIGAI 200 (368)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCC-----------------------cch-H---HHHHH-HHHHHcChhHHHHHHH
Confidence 988888887777778899876542210 000 0 01112 2335677888888888
Q ss_pred HHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc---hhH-HHHHHHHHHHHHHHH
Q 013312 255 AFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---AKL-LSLGLFAACINMFIC 330 (445)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~~~~~~~~~ 330 (445)
.++.....+.+.+|+|.|+++ .|++.. .+.......+.+.++. ++++||..| |+. ......+.++....+
T Consensus 201 ~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g~----~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~ 274 (368)
T TIGR00903 201 LGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIGV----AVIPDRVARAGLRSIYIRAAALLIAAFFLAL 274 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHHH----HHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999888999999999999977 688865 5666666666665554 566776643 333 222344444444444
Q ss_pred HhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccch
Q 013312 331 SISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPG 409 (445)
Q Consensus 331 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~ 409 (445)
....+.+.... ..+.+++.....+..+++.+|.+|++.||++.|+.+..+++++..+|.+.+.+.. +...
T Consensus 275 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---------~~~~ 345 (368)
T TIGR00903 275 AFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---------SAEA 345 (368)
T ss_pred HHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---------CHHH
Confidence 44444443332 3445566666777788999999999999999999999999999999999988773 1112
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 013312 410 FSIMCIGLASMVAFIQSL 427 (445)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~ 427 (445)
.|.+.+...+++.+...
T Consensus 346 -~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 346 -YFTFLAILITIAFAIAL 362 (368)
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 24444555555555544
No 26
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.6e-34 Score=274.10 Aligned_cols=358 Identities=13% Similarity=0.113 Sum_probs=260.2
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
++.+...++..+...++.....+..|.+.+| ++.+..+.+++.+++.++..+++++.|+++||+|||+++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKAD--------LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 4456667777788888888888888887644 46667788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
+.++.+++.++++++++ ++.+++.|+++|+ +.+...+....++.|++|+|+|+++.++...+..+|.++++.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 89 SIVAYSVGTGLSGLASG---VIMLTLSRFIVGM-GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999 8888889999999999999999999999999999999998877654
Q ss_pred ----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHh
Q 013312 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (445)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (445)
.+||+.|++.....+ ..+......||+++.++++.+ + ++ ++ .+... +..+...+..
T Consensus 165 l~~~~~w~~~f~i~~~~~~-~~~~~~~~~p~~~~~~~~~~~---------~---~~---~~-~~~~~---~~~~~~~~~~ 224 (426)
T PRK12307 165 FAEAYGWRAAFFVGLLPVL-LVIYIRARAPESKEWEEAKLS---------G---KG---KH-SQSAW---SVFSLSMKGL 224 (426)
T ss_pred HcccCCHHHHHHHHHHHHH-HHHHHHHHCCCChHHHHhhhh---------c---cc---cc-cccch---hhhhHHHHHH
Confidence 589999988654332 222222233443221111000 0 00 00 00000 0011112223
Q ss_pred hcchhhHHHHHHH---HHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 013312 243 RSSVTLSQAAVVA---FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (445)
Q Consensus 243 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (445)
.+++.++...... +...........++|.|+++ .|+++.+.+...+...++.+++. +..+++.||++||+.+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~~~~ 302 (426)
T PRK12307 225 FNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGN-IVWGLCADRIGLKKTFSIG 302 (426)
T ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHH
Confidence 4455544333222 22222333456788999987 69999999999999999999988 7789999999999988888
Q ss_pred HHHHHHHHHHHHhcC-CchhHHHHHHHHhh--hhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 320 LFAACINMFICSISW-SAWVPYATTAFSVL--VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 320 ~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
..+..+..+.+...+ +........+++.+ .....+....++.|.+|++.||+++|+.+...++++.++|.+.|++.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 303 LLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 777666555444333 22222222333332 223345566778999999999999999999999999999999999998
Q ss_pred hh
Q 013312 397 LF 398 (445)
Q Consensus 397 ~~ 398 (445)
+.
T Consensus 383 ~~ 384 (426)
T PRK12307 383 TM 384 (426)
T ss_pred cc
Confidence 76
No 27
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=9e-34 Score=271.36 Aligned_cols=363 Identities=13% Similarity=0.099 Sum_probs=252.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCc-chhHHHHHHHHHhhhccchhH
Q 013312 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGSI 125 (445)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~g~~ 125 (445)
+.+..+.|+..+.+.++..+++++.|+++||+|||++++.+.++.+++.+.+++.+.. ..++.+++.|++.|+ +.+..
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi-~~g~~ 137 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGW-FQGMG 137 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHH-HHhcc
Confidence 6777889999999999999999999999999999999999999999999988876410 017888999999999 77877
Q ss_pred HHHHHHHHhcCCCccchhhHHHHHHHHHhhhh-hhhhhhhh----hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 013312 126 NCLALAYVADNISERQRASAFGILLGVLSASF-VCGTLAAR----FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (445)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~l~~----~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~ 200 (445)
.|.....+.|++|+++|++++++.+.+.++|. ..+|+++. ..+||+.|++.+++.++..++..+++||++++...
T Consensus 138 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (452)
T PRK11273 138 WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGL 217 (452)
T ss_pred chHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCC
Confidence 78888889999999999999999999998886 44565432 23899999998888777767777778887654221
Q ss_pred cCCccccchhhhcccccCCCCCCcccccccccchhHHH-HHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCC
Q 013312 201 DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 279 (445)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (445)
+++.+ .+++..++.+. ++ +++.+.++. .+..++++.++...+..++.....+....++|.|+++..|+
T Consensus 218 ~~~~~-----~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~ 286 (452)
T PRK11273 218 PPIEE-----YKNDYPDDYNE-----KH-EQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHF 286 (452)
T ss_pred CChhh-----hhhcccccccc-----cc-CCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11100 00000000000 00 011122332 23356778888877777777777777888999999998899
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhhh--cchhHH-HHHHHHHHHHHHHHHhc--CCchhHHH-HHHHHhhhhhhh
Q 013312 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLL-SLGLFAACINMFICSIS--WSAWVPYA-TTAFSVLVVFAT 353 (445)
Q Consensus 280 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~g~~~~~~~ 353 (445)
+..+.+.......++.+++. ++.|+++||+ +||+.. .....+..++.+.+... .+.+.... ....+.......
T Consensus 287 s~~~~~~~~~~~~~~~~~g~-~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 365 (452)
T PRK11273 287 ALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPV 365 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHH
Confidence 99999988888888888888 7889999998 444332 22223333333332222 22222222 233333322223
Q ss_pred hhHHHHHhcccCCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013312 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIV-SPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 430 (445)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (445)
.....+..|.+|++.||++.|+.+...++|+.+ +|.+.|.+.|+. ++.. .|.+.+.+++++++......
T Consensus 366 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-------g~~~-~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 366 MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-------GWDG-GFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-------cchH-HHHHHHHHHHHHHHHHHHHh
Confidence 334456779999999999999999999998765 799999999987 3333 34455555555555554433
No 28
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=9.9e-34 Score=268.06 Aligned_cols=343 Identities=13% Similarity=0.077 Sum_probs=267.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHH
Q 013312 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (445)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 93 (445)
.+..++..++..++.|.+|.+.+| ++.+..+.++..+.+.+++.+++++.|+++||+|||+++..+....++
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 19 VLFEFATYIANDMIQPGMLAVVED--------FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHhhhhhHhcchHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 344455566788888999988654 466667889999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hch
Q 013312 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LST 169 (445)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w 169 (445)
+.+.+.++++ ++.+++.|+++|+ +.+...+...+++.|.+|+++|.++.++......+|..+||.+++. .+|
T Consensus 91 ~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w 166 (406)
T PRK15402 91 TCLAILLAQS---IEQFTLLRFLQGI-GLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW 166 (406)
T ss_pred HHHHHHHHcc---HHHHHHHHHHHHh-HhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 9999999999 8999999999999 8788888899999999999999999999988888888888888765 489
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhH
Q 013312 170 TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLS 249 (445)
Q Consensus 170 ~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (445)
|+.|++.+++.++..+...+..||++++++++ .+..+..+..+..+++|.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~ 218 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETAGRVGEK----------------------------LSLKELGRDYKLVLKNRRFV 218 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCCcccccc----------------------------ccHHHHHHHHHHHHcCcHHH
Confidence 99999988887777666556667654321110 00011222234456777777
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHH
Q 013312 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (445)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (445)
...+..++..........+.|.|+++.+|+++.+.+.......++..++. +..+++.||+++|+.+..+..+..++...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~-~~~g~l~~r~~~~~~~~~~~~~~~~g~~~ 297 (406)
T PRK15402 219 AGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGN-LTLARLTSRRPLRSLIRMGLWPMVAGLLL 297 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 66666656655555666778999888889999999988877777777877 77899999999999988888877777666
Q ss_pred HHhcC-----CchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 330 CSISW-----SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 330 ~~~~~-----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+.... +.+.... ..+.+++.+...+......... +++++|++.+..+..+.++..+|+.+.+.+++..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 298 AALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred HHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 55422 2222222 4667777777777766665443 4589999999999999999999999999988764
No 29
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.4e-33 Score=272.34 Aligned_cols=376 Identities=13% Similarity=0.072 Sum_probs=286.6
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
++.++.+.+..++..++.....+.+|.+.+| ++.+..+.|++.+.+.++..++.++.|+++||+|||++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 80 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQS--------LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFT 80 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH--------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 4466778888888889999999999999754 46667788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
+..+.+++.+.+.++++ ++.+++.|+++|+ +.+...|...+++.|++|+++|+++.+..+...++|..+||.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~ 156 (471)
T PRK10504 81 AIVLFTLGSLFCALSGT---LNELLLARVLQGV-GGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGL 156 (471)
T ss_pred HHHHHHHHHHHHHHhCC---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999988 8999999999999 8888889999999999999999999999999999999999988876
Q ss_pred ----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhh---------hcccccCCCCCCc---------
Q 013312 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEE---------TEGVNQNESNSPV--------- 224 (445)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~--------- 224 (445)
.+||+.|++......+..+......|+.+.+..+ .|........ .++.+........
T Consensus 157 l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (471)
T PRK10504 157 LVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRR-FDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGV 235 (471)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCC-CChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHH
Confidence 4899999998887776666665555654332221 1111100000 0000000000000
Q ss_pred ------ccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHH
Q 013312 225 ------KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTIS 298 (445)
Q Consensus 225 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 298 (445)
..++.+..++..+ .+ ++++|.+...+...++..........+.|.|++...|.++.+.++......++..++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~-l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 313 (471)
T PRK10504 236 VALLLYLLHARNNNRALFS-LK-LFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGM 313 (471)
T ss_pred HHHHHHHHHHhcCCCCccC-HH-HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0000000011111 11 456777777777777777777777788899998878999999999888888888777
Q ss_pred HHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC-Cch--hHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHH
Q 013312 299 QLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW-SAW--VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 374 (445)
Q Consensus 299 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 374 (445)
. .+.+++.||+++|+.+..+..+..+...++.+.. +.+ .... ..+.|++.+...+..+....+.+|++++|+++|
T Consensus 314 ~-~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 392 (471)
T PRK10504 314 K-RIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNS 392 (471)
T ss_pred H-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHH
Confidence 6 7779999999999999888887777766555532 222 2222 345567788888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 375 CISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 375 ~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+.++...+|..+|+.+.|.+.+..
T Consensus 393 ~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 393 LLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999876
No 30
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=8.6e-34 Score=267.28 Aligned_cols=364 Identities=15% Similarity=0.171 Sum_probs=268.4
Q ss_pred hhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHh
Q 013312 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (445)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (445)
++++.++.+.+..++..++.++..|.+|.+.+ ++++.+..+.|++.+++.++..+++++.|+++||+||||++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~-------~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (392)
T PRK12382 12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVH-------HDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA 84 (392)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhhhHHHH-------HhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH
Confidence 34667888888899999999999999998875 34467778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---h-----hcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhh
Q 013312 85 TLPLTLSIIPLAILA---Y-----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (445)
Q Consensus 85 ~~~~~~~~~~~~~~~---~-----~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (445)
..+.+...++.+.+. . .++ ++.+++.|+++|+ +.+...+...+++.|+.|+|+|++++++.+.+...|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g 160 (392)
T PRK12382 85 LQGMLACGLAGLAYLLAAILPVSAPFK---FALLVVGRLILGF-GESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGA 160 (392)
T ss_pred HHHHHHHHHHHHHHHhhhccccchhHH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHH
Confidence 999887776654332 2 234 8889999999999 888888889999999999999999999999999999
Q ss_pred hhhhhhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCccccccccc
Q 013312 157 FVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (445)
Q Consensus 157 ~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (445)
..+||.+++. .+||+.+.+..+..++.... ....||.++++ + ++
T Consensus 161 ~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~-----------------------------~~ 208 (392)
T PRK12382 161 LAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF-NGTVRKVPAHA--G-----------------------------ER 208 (392)
T ss_pred HHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH-HHhccCCCCCc--c-----------------------------cC
Confidence 9999888765 48888776655443322211 11222211100 0 00
Q ss_pred chhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 013312 233 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE 312 (445)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (445)
++.++..+.+++ +. +..++..........+.|.|+++ .|++. .+......+++.+++. +..+++.||+++
T Consensus 209 ~~~~~~~~~~~~-~~-----~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~-~~~g~l~~r~g~ 278 (392)
T PRK12382 209 PSLWSVVGLIWK-PG-----LGLALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMR-VLFGWMPDRFGG 278 (392)
T ss_pred chHHHHHHHHHH-hH-----HHHHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHH-HHHHHHHHhcCC
Confidence 012222222221 11 11222334455566778888877 46654 4555666777777777 777999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHH
Q 013312 313 AKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF 391 (445)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 391 (445)
|+.+..+..+..++.+.+...++.+.... ..+.+++.+...+...+...|..|+++||++.|+.+....+|..++|.+.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~ 358 (392)
T PRK12382 279 VKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLA 358 (392)
T ss_pred CeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888888777777666554444 36667888878888888889999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhc
Q 013312 392 SPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMM 429 (445)
Q Consensus 392 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (445)
|.+.|+. ++.. .+.+.+.+.+++....+..
T Consensus 359 g~l~~~~-------g~~~-~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 359 GMLATSF-------GYPS-VFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHh-------CchH-HHHHHHHHHHHHHHHHHhh
Confidence 9999986 3333 3555666666666655544
No 31
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=9e-34 Score=265.93 Aligned_cols=363 Identities=14% Similarity=0.122 Sum_probs=271.6
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH-HHHHHH
Q 013312 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL-PLTLSI 92 (445)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~-~~~~~~ 92 (445)
.+..++..++.++..|.+|.+.+ ++++.+..+.|++.+++.+...+.+++.|+++||+||||.++. +.....
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~-------~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~ 75 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLS-------EEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAA 75 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHH-------cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 45578888999999999999875 3456777889999999999999999999999999999887654 566667
Q ss_pred HHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhH--HHHHHHHHhhhhhhhhhhhhh----
Q 013312 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASA--FGILLGVLSASFVCGTLAARF---- 166 (445)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~l~~~---- 166 (445)
++.++++++++ ++.+++.|++.|. ..+...|...++..|+.|+++|++. .+......++|..+||.+++.
T Consensus 76 ~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 151 (375)
T TIGR00899 76 LACLLFAWNRN---YFLLLVLGVLLSS-FASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG 151 (375)
T ss_pred HHHHHHHhcch---HHHHHHHHHHHHh-hhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh
Confidence 77788889998 8889999999988 6677788889999999887777654 577777888898888888765
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcch
Q 013312 167 LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSV 246 (445)
Q Consensus 167 ~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (445)
.+||+.|++.+++.++..+..++.+||+++++++++ +..+.++ ..++|
T Consensus 152 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~----~~~~~ 199 (375)
T TIGR00899 152 FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL----------------------------TRLEVRG----LLASR 199 (375)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc----------------------------Ccchhhh----hhcCc
Confidence 489999999998877776666677887654321110 0001111 23344
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHH
Q 013312 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (445)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (445)
.++......++..........+.|.|+++.+|.++.+.+...........++. +..+++.||+++|+.+..+.....+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~ 278 (375)
T TIGR00899 200 DTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFM-LLAGYLIKRFGKRRLMLLAALAGVAF 278 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcchhHHHHHHHHHHHH
Confidence 45444444444444445556778999988889999999988877776776766 77799999999999888777766655
Q ss_pred HHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 013312 327 MFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 405 (445)
Q Consensus 327 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 405 (445)
...+...++.+..... .+.+++.+...+....+..|..|+ ++++++|+.+...++|..++|.+.|.+.+..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~------- 350 (375)
T TIGR00899 279 YTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW------- 350 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 5555555555544443 556777777788888888888874 5679999999999999999999999999875
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhc
Q 013312 406 NFPGFSIMCIGLASMVAFIQSLMM 429 (445)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~ 429 (445)
++.. .+.+.+++.+++.+....+
T Consensus 351 g~~~-~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 351 SYHA-VYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred cchh-HHHHHHHHHHHHHHHHhee
Confidence 3322 3555566666666655544
No 32
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=6.6e-35 Score=282.45 Aligned_cols=411 Identities=14% Similarity=0.111 Sum_probs=272.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
......++.+...++...+.+..|.+.++...+..++.+.+..+.|++.+++.++..++++++|+++||+|||++++.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~ 92 (479)
T PRK10077 13 ITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAA 92 (479)
T ss_pred HHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 34445566677778888888888888777654445566888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh---------cCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhh
Q 013312 89 TLSIIPLAILAYR---------RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159 (445)
Q Consensus 89 ~~~~~~~~~~~~~---------~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 159 (445)
.+..++.+.++++ ++.+.++.+++.|+++|+ +.|...+...++++|++|+++|++++++.+....+|..+
T Consensus 93 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~ 171 (479)
T PRK10077 93 VLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGI-GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLV 171 (479)
T ss_pred HHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhh-hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHH
Confidence 9999998887763 222225678899999999 889999999999999999999999999999999999988
Q ss_pred hhhhhh------------hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccc
Q 013312 160 GTLAAR------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIP 227 (445)
Q Consensus 160 g~~l~~------------~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (445)
++.++. ..+||+.|++.+++.++..+ ..+.+||+|+...++++.++..+..++..+.+ +..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~----~~~-- 244 (479)
T PRK10077 172 VYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILRKIMGNT----LAT-- 244 (479)
T ss_pred HHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCCh----hHH--
Confidence 876653 24899999998877766544 45678988753221111111100000000000 000
Q ss_pred cccccchhHHHHHH-hhcchhhHH----HHHH-----HHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHH
Q 013312 228 VCKKIPSIRDLICL-LRSSVTLSQ----AAVV-----AFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTI 297 (445)
Q Consensus 228 ~~~~~~~~~~~~~~-~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 297 (445)
+..++.++..+. ..+.+..+. .... .+...........+.|.+.++ .|.+....+......++..++
T Consensus 245 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i 321 (479)
T PRK10077 245 --QALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLT 321 (479)
T ss_pred --HHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHH
Confidence 000001111000 000011100 0110 111111122334455666665 788877777777778888888
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc---CCchhH--HHHHHHHhhhhh-hhhhHHHHHhcccCCccchh
Q 013312 298 SQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---WSAWVP--YATTAFSVLVVF-ATPSFRSIVSKQVGPNEQGK 371 (445)
Q Consensus 298 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~ 371 (445)
+. ++.+++.||+|||+.+..+..+.+++.+.+... +..+.. ....+++.+.+. ..|..+.+++|.+|+++|++
T Consensus 322 ~~-~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 400 (479)
T PRK10077 322 FT-VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGK 400 (479)
T ss_pred HH-HHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHH
Confidence 87 888999999999999999998888877666532 122211 222333444433 34778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCcccchhHHHHHHHHHHHHHHHHHhccCCCC
Q 013312 372 AQGCISGISSFANIVSPLIFSPLTALFLSKG-APFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 434 (445)
Q Consensus 372 ~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (445)
+.|+.+..++++..+++.+.+.+.+. ++. ..++. ...+.+.+++.+++.+..+...++++
T Consensus 401 ~~g~~~~~~~~g~~~~~~~~p~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 401 ALAIAVAAQWIANYFVSWTFPMMDKN--SWLVAHFHN-GFSYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhc--cchhhhccC-ccHHHHHHHHHHHHHHHHHhccccCC
Confidence 99999999999999998887765521 000 00022 22345555555555565555555544
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=3.1e-34 Score=269.23 Aligned_cols=349 Identities=15% Similarity=0.107 Sum_probs=266.2
Q ss_pred HHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcC
Q 013312 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS 103 (445)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 103 (445)
.....+..|.+.+ +++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++
T Consensus 19 ~~~~~~~~~~~~~--------~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~ 90 (377)
T TIGR00890 19 VYTWTLLAPPLGR--------YFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADS 90 (377)
T ss_pred HhhhhhHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHH
Confidence 4445667777754 44677789999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hchhhHHHHHHHH
Q 013312 104 ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIV 179 (445)
Q Consensus 104 ~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~ 179 (445)
++.+++.|++.|+ +.+...+.....+.|++| |+|+++.++.....++|..+++.+.+. .+||+.|++.+++
T Consensus 91 ---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 91 ---LAALYLTYGLASA-GVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred ---HHHHHHHHHHHhH-HHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 9999999999999 888777888888899887 689999999999999998765444433 4899999999988
Q ss_pred HHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHH
Q 013312 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (445)
Q Consensus 180 ~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (445)
.++..+...+.+||++++++++++ + . .++. ++ .+...+++.++......++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~------~-~~~~---~~-~~~~~~~~~~~~~~~~~~~~~ 218 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQLIKTNI----------------E------V-SVKD---YT-VWEMLRTPQFWVLYLSFFLNA 218 (377)
T ss_pred HHHHHHHHHHheecCchhccccCc----------------c------c-chhh---hh-HHHHHcCccHHHHHHHHHHHh
Confidence 877776666666654432211100 0 0 0000 11 112345666666555555555
Q ss_pred hhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCch--
Q 013312 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW-- 337 (445)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 337 (445)
........+.+.|.++ +|.++.+.+.......+...++. +..+++.||++||+.+..+.....++.+.+.+.++..
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T TIGR00890 219 VSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGR-PFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDV 296 (377)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhH
Confidence 5555556667777765 78998888999999999999988 8889999999999999888888888877766655332
Q ss_pred hHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHH
Q 013312 338 VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIG 416 (445)
Q Consensus 338 ~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 416 (445)
.... ..+.+++.+...+...++..|.+|+++|+++.|+.+...++|..++|.+.|.+.++. ++.. .+.+.+
T Consensus 297 ~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-------g~~~-~f~~~~ 368 (377)
T TIGR00890 297 LFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-------GFEY-TFIVTG 368 (377)
T ss_pred HHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-------chhh-HHHHHH
Confidence 2222 345566666677777888999999999999999999999999999999999999876 3332 345555
Q ss_pred HHHHHH
Q 013312 417 LASMVA 422 (445)
Q Consensus 417 ~~~~~~ 422 (445)
++.+++
T Consensus 369 ~~~~~~ 374 (377)
T TIGR00890 369 AFALTS 374 (377)
T ss_pred HHHHHh
Confidence 554443
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=4.1e-34 Score=277.50 Aligned_cols=374 Identities=11% Similarity=0.084 Sum_probs=291.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
.+..+.+..++..++..+..+.+|.+.++ ++.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGD--------LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH
Confidence 34566778888999999999999999754 3556677899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh--
Q 013312 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-- 166 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-- 166 (445)
++.+++.++++++++ ++.+++.|+++|+ +.+...+...+++.|++|+++|++++++......+|..+||.+++.
T Consensus 75 ~~~~~~~~~~~~~~~---~~~l~~~~~~~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 150 (485)
T TIGR00711 75 FAFTLGSLLCGVAPN---LELMIIFRVIQGF-GGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII 150 (485)
T ss_pred HHHHHHHHHHhCcCC---HHHHHHHHHHHHh-hhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc
Confidence 999999999999999 9999999999999 8888889999999999999999999999999999999999988876
Q ss_pred --hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccch---------hhhcccccCCCCCCccc---------
Q 013312 167 --LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIIT---------EETEGVNQNESNSPVKI--------- 226 (445)
Q Consensus 167 --~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~--------- 226 (445)
.+||+.|++.+.+.++..+...+..||++++++++.|..+... ...++.+++++.++...
T Consensus 151 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (485)
T TIGR00711 151 ENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLV 230 (485)
T ss_pred cCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHH
Confidence 4899999999888777777766777775443222222111000 00001111111111000
Q ss_pred -------ccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHH
Q 013312 227 -------PVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQ 299 (445)
Q Consensus 227 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 299 (445)
.+.+.+++..+ . ..+++|.++...+..++..+.......++|.|+++.+|+++.+.+.......++..++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 308 (485)
T TIGR00711 231 AIIAFVVWELTDDNPLVD-L-RLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSS 308 (485)
T ss_pred HHHHHHHHHHcCCCCccC-H-HHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 00011111111 1 13456677777777777777778888899999999899999999999999999999988
Q ss_pred HHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc--C--CchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHH
Q 013312 300 LLFMPLLAPILGEAKLLSLGLFAACINMFICSIS--W--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 374 (445)
Q Consensus 300 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 374 (445)
++.+++.||+++|+.+..+..+..++...+.+. + +.+.... ..+.|++.+...+.......+..|++++|++.|
T Consensus 309 -~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~ 387 (485)
T TIGR00711 309 -PIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSS 387 (485)
T ss_pred -HHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHH
Confidence 788999999999999998888888887776631 2 2232333 466788888888777788888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 013312 375 CISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 375 ~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
+.+..+.+|+.+|+.+.|.+.++
T Consensus 388 ~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 35
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=8.4e-34 Score=266.40 Aligned_cols=353 Identities=15% Similarity=0.176 Sum_probs=277.8
Q ss_pred CcchhhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCc
Q 013312 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (445)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 80 (445)
|+.+. ||.++.+.+..++...+.+...|.+|.+.++ +++.+..+.|++.+.+.+...+++++.|+++||+||
T Consensus 1 ~~~~~-~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~-------~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~ 72 (395)
T PRK10054 1 MNLSL-RRSTSALLASSLLLTIGRGATLPFMTIYLSR-------QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDK 72 (395)
T ss_pred CCCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 54443 5567788888999999999999999999863 457777899999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhh
Q 013312 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (445)
Q Consensus 81 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (445)
|+++..+.+..+++.+...++++ ++.+++.|.+.|. +.+...+...++..|..|+++|++++++.+...++|..+|
T Consensus 73 k~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~ig 148 (395)
T PRK10054 73 KRYMLLAITAFASGFIAIPLVNN---VTLVVLFFALINC-AYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVG 148 (395)
T ss_pred chhHHHHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 8888889999888 6677788899999999999999999999999999999999
Q ss_pred hhhhhhh---chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHH
Q 013312 161 TLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (445)
Q Consensus 161 ~~l~~~~---~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (445)
|.+++.+ +|+.+|++.+++.++..+...+.+||++++++++ + + + . ++
T Consensus 149 p~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-----------------------~-~--~---~-~~ 198 (395)
T PRK10054 149 PPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATE-----------------------T-G--S---V-WS 198 (395)
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccccccccc-----------------------h-h--h---h-hh
Confidence 9998874 8999999888877766555555566543321110 0 0 0 0 11
Q ss_pred HHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhh--cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhH
Q 013312 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (445)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (445)
.+...++|.++...+..++..+.......+.+.|..+. .+.+....+.............+ ...+++.||.++|+.
T Consensus 199 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 276 (395)
T PRK10054 199 -PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQ-YSVGRRLNAANIRPL 276 (395)
T ss_pred -hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeeh-hHHHHHHccCCchhH
Confidence 12245667777666666666666555556667776432 35566677777777777766666 666899999999999
Q ss_pred HHHHHHHHHHHHHHHHhc-CCchhHH-HHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 013312 316 LSLGLFAACINMFICSIS-WSAWVPY-ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (445)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 393 (445)
+..+..+..++...+.+. ++.+... ...+++++.....|...+.+.+..|++.++++.+..+ ...+|..+||.++|.
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~ 355 (395)
T PRK10054 277 MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGV 355 (395)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHH
Confidence 888888888877766654 3444333 3466788888888888899999999999999999765 677999999999999
Q ss_pred HHHhh
Q 013312 394 LTALF 398 (445)
Q Consensus 394 l~~~~ 398 (445)
++|+.
T Consensus 356 l~~~~ 360 (395)
T PRK10054 356 ILTTL 360 (395)
T ss_pred HHHHc
Confidence 99986
No 36
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.6e-33 Score=265.25 Aligned_cols=347 Identities=13% Similarity=0.109 Sum_probs=269.5
Q ss_pred hhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHh
Q 013312 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (445)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 84 (445)
+++|..+..++..++.........+.+|.+.++ ++.+..+.|++.+.+.++..+++++.|+++||+|||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~--------~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~ 75 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEY--------FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL 75 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 445666777777888878788888888888644 466778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh
Q 013312 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (445)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (445)
..+..+.+++.++++++++ ++.+++.|+++|+ +.+...+...+++.|++|+++|+++++..+....+|..++|.+.
T Consensus 76 ~~~~~~~~i~~~l~~~~~~---~~~~~~~~~l~G~-~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 151 (394)
T PRK03699 76 IFGFALMILAVAGLMFSHS---LALFSIAMFVLGV-VSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIA 151 (394)
T ss_pred HHHHHHHHHHHHHHHHcch---HHHHHHHHHHHHH-hhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 8999999999999 88888888999999999999999999998888888888888765
Q ss_pred hh-----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHH
Q 013312 165 RF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (445)
Q Consensus 165 ~~-----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (445)
+. .+||+.|.+.+++.++..++.+ . ++.|+.+++++ +++ + + .. ++
T Consensus 152 ~~l~~~~~gw~~~f~~~~~~~~~~~~~~~-~-~~~p~~~~~~~---------------~~~----~-~--~~----~~-- 201 (394)
T PRK03699 152 AYLLARSIEWYWVYACIGLVYVAIFILTL-F-SEFPALGKHAP---------------KAD----K-P--VA----KE-- 201 (394)
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHH-h-cCCccccccCc---------------ccc----C-c--cc----cc--
Confidence 53 4899999988877665544332 2 22221111100 000 0 0 00 00
Q ss_pred HHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 013312 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (445)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (445)
..++.++...+..++..........+.|.|+++.+|+|+.+.+.+.+...++..++. +..+++.||+++|+.+...
T Consensus 202 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~l~~~ 277 (394)
T PRK03699 202 ---KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGM-WIFSFIVRFFDLQRILTVL 277 (394)
T ss_pred ---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHH-HHHHHHHHHhchhhHHHHH
Confidence 012344445555566666667788999999988899999999999999999999988 7889999999999988877
Q ss_pred HHHHHHHHHHHHhcCCchhHH-HHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 320 LFAACINMFICSISWSAWVPY-ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
..+..+...++...++.+... ...+.|++.+..++...+...+..| +.+++..|......++|..++|.+.|++.|..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~ 356 (394)
T PRK03699 278 AGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF 356 (394)
T ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 777666666665555554333 3466677777778888888877776 55678889999999999999999999999976
No 37
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=7.9e-35 Score=270.69 Aligned_cols=343 Identities=24% Similarity=0.336 Sum_probs=268.9
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHH
Q 013312 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (445)
Q Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~ 92 (445)
+++..++..++..+..+.+|.+.. ++++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~ 73 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLA-------EELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFA 73 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHH-------CCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHH-------HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhh
Confidence 356778888999999999994433 4556777889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh----c
Q 013312 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----S 168 (445)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~ 168 (445)
++.++..++++ .+.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+...++|..+||.+++.+ +
T Consensus 74 ~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~ 149 (352)
T PF07690_consen 74 LGSLLLAFASN---FWLLLIARFLLGI-GSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG 149 (352)
T ss_dssp HHHHHHHHHCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH
T ss_pred hHHHHhhhhhh---HHHHhhhcccccc-ccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc
Confidence 99777777777 7899999999999 88899999999999999999999999999999999999999998874 7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhh
Q 013312 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTL 248 (445)
Q Consensus 169 w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (445)
||+.|++.+++.++..++....+++++++++++++.++. .+.++++++.++..+++|.+
T Consensus 150 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~ 208 (352)
T PF07690_consen 150 WRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE---------------------SKKPKPLKPGFKSLFKNPVL 208 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT-----------------------HHHCCCH-CTHHHHHHCC
T ss_pred cccccccccchhhhhhhhHhhhhhhcccccccccccccc---------------------cccccccccccccccccchh
Confidence 999999999998887765556666655444332111000 00111112223335566666
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCc-hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN-KNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
+......+...+.......+.|.|+++.+|++ ..+.+......++...++. ++.+++.||+++++..........+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 287 (352)
T PF07690_consen 209 WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGS-LLAGRLSDRFGRRRRLLIAILLLILGA 287 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 64555555665677778899999988889999 7899999999999999987 778999999998877776666666665
Q ss_pred HHHHhcCC----chhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHH
Q 013312 328 FICSISWS----AWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 388 (445)
Q Consensus 328 ~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~ 388 (445)
..+..... .+......+.|++.+...+...++..|.+|++++|++.|+.+...+++..++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 288 LGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55544332 23333457778889999999999999999999999999999999999999987
No 38
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=7.3e-33 Score=260.73 Aligned_cols=344 Identities=16% Similarity=0.149 Sum_probs=270.3
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
++....+....++...+..+..|.+|.+.+| ++.+..+.|++.+++.++..+++++.|+++||+|||+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 75 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPEIAAD--------LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLL 75 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHH
Confidence 4455555555667778889999999988754 46667889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
+.++.+++.+.+.++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..+||.+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 151 (385)
T TIGR00710 76 GLFIFALSSLGLALSNN---IETLLVLRFVQAF-GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGY 151 (385)
T ss_pred HHHHHHHHHHHHHHHcc---HHHHHHHHHHHHc-chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999 8888889999999999999999999999999999999999888876
Q ss_pred ----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHh
Q 013312 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (445)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (445)
.+||+.|++.++..++..+...+..||++++++++ +.++..++ .+..
T Consensus 152 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~-~~~~ 202 (385)
T TIGR00710 152 ILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI----------------------------QISTYFET-FLLL 202 (385)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC----------------------------CHHHHHHH-HHHH
Confidence 48999999888877776666666667654322110 00011122 2334
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 013312 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (445)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (445)
.++|.++...+...+..........+.|.++++.+|+++.+.+.+.....++.+++. ++.+++.||+++|+.+..+..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~ 281 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGG-FLNGRFIKKWGAKSLLRMGLIL 281 (385)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHH
Confidence 566767666665555555666677788999988899999999999999999998888 7789999999999988888777
Q ss_pred HHHHHHHHHhcC----Cch-hHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 013312 323 ACINMFICSISW----SAW-VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (445)
Q Consensus 323 ~~~~~~~~~~~~----~~~-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 393 (445)
..++...+.... +.+ .... ..+.+++.+...+.......|..| ++++++.++.+.....++.+.+.+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~ 357 (385)
T TIGR00710 282 FAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSL 357 (385)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 776665554421 222 2222 355677788888888888888876 679999999999887766666666663
No 39
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.9e-33 Score=272.53 Aligned_cols=418 Identities=13% Similarity=0.103 Sum_probs=271.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
......++.+.+.++........|.+..+.. .++.+.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.
T Consensus 17 ~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 17 AIVIAGVGFFTDSYDLFCISLVTKMLGYVYY---HGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 4455667778888888888888887765422 1223456677899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcc---hhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhh
Q 013312 89 TLSIIPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (445)
++..++.++++++++.. .++.+++.|+++|+ +.+...+....+++|++|+++|+++.++.+....+|..+|+.++.
T Consensus 94 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~-~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 94 IIMIIATVASGLSPGSSPKSVMATLCFWRFWLGV-GIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHccCcccchHHHHHHHHHHHHHH-HHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888876421 15789999999999 889989999999999999999999999999999999988876653
Q ss_pred h---------------------------hchhhHHHHHHHHHHHHHHHHHHhccCCCCCC---CCcC-Cccccchhhhcc
Q 013312 166 F---------------------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPND---DDDD-LTRPIITEETEG 214 (445)
Q Consensus 166 ~---------------------------~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~---~~~~-~~~~~~~~~~~~ 214 (445)
. .+||++|.+.++..++.. +..+.+||+|+.. ++++ +.++...+..+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~ 251 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLAL-YFRLTIPETPRYTADVAKDVEQAASDMSAVLQV 251 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcc
Confidence 2 269999988887765544 4457899999842 2221 122112211111
Q ss_pred cccC--CCCCCcccccccccchhHHHHHHhhcchh---hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHH---
Q 013312 215 VNQN--ESNSPVKIPVCKKIPSIRDLICLLRSSVT---LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD--- 286 (445)
Q Consensus 215 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~--- 286 (445)
+.++ ++.++.+++.++.+.++++.++...+++. ........+...+.+++...+.|.++++ .|+++.+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~ 330 (502)
T TIGR00887 252 KIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAY 330 (502)
T ss_pred ccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHH
Confidence 1010 11000000011111234454432212222 1111222333344455566678888876 6876542211
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCC----chhHHHHHHH-Hhhhhhh
Q 013312 287 ---------LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS----AWVPYATTAF-SVLVVFA 352 (445)
Q Consensus 287 ---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-g~~~~~~ 352 (445)
......++.+++. ++.+++.||+|||+++..+..+..++..++....+ ........+. .++....
T Consensus 331 ~~~~~~~~~~~~~~~~~~i~g~-~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (502)
T TIGR00887 331 EELYKTAVGNLIIALAGTVPGY-WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGP 409 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC
Confidence 1222333444555 77789999999999988888777766655544221 1111111111 2222334
Q ss_pred hhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---CCcccchhHHHHHHHHHHHHHHHHHhc
Q 013312 353 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG---APFNFPGFSIMCIGLASMVAFIQSLMM 429 (445)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (445)
.+..+.+.+|.+|++.|+++.|+.+..+.++++++|.+.+.+.+...... ...+. ...+.+.+++.+++.+..+++
T Consensus 410 ~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~i~~~~l 488 (502)
T TIGR00887 410 NATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWM-GHVLEIFALFMFLGILFTLLI 488 (502)
T ss_pred CchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccc-hHHHHHHHHHHHHHHHHheEe
Confidence 56677888999999999999999999999999999999999987431110 00111 223455555556555554444
Q ss_pred cCCCCC
Q 013312 430 SHTPAS 435 (445)
Q Consensus 430 ~~~~~~ 435 (445)
+|++.
T Consensus 489 -pEt~~ 493 (502)
T TIGR00887 489 -PETKG 493 (502)
T ss_pred -ccCCC
Confidence 44443
No 40
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=9.5e-34 Score=274.71 Aligned_cols=405 Identities=14% Similarity=0.091 Sum_probs=270.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHH
Q 013312 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (445)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~ 97 (445)
+...++.....+.+|....+.--....+.+.+..+.|++.+++.++..++++++|+++||+|||+++..+.++.+++.++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~ 117 (481)
T TIGR00879 38 LMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAIL 117 (481)
T ss_pred HhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 44555666777777777665311111222455788999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh---hh----hchh
Q 013312 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA---RF----LSTT 170 (445)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~---~~----~~w~ 170 (445)
+.+..+...++.+++.|+++|+ +.+...+...+++.|++|+++|++++++.+....+|..+++.++ .. .+||
T Consensus 118 ~~~~~~~~~~~~~~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~ 196 (481)
T TIGR00879 118 MGLAAFALSVEMLIVGRVLLGI-GVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWR 196 (481)
T ss_pred HHHhccccchHHHHHHHHHHHh-hhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHH
Confidence 8776553336689999999999 88888899999999999999999999999999999999999988 33 5899
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCccc-----------ccccccchhHHHH
Q 013312 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKI-----------PVCKKIPSIRDLI 239 (445)
Q Consensus 171 ~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 239 (445)
+.|++.++..++. +...+++||+++...++++.++..+...+..+.+++..+..+ +.+...+.+++.+
T Consensus 197 ~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (481)
T TIGR00879 197 IPLGLQLIPAGLL-FLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLF 275 (481)
T ss_pred HHHHHHHHHHHHH-HHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHH
Confidence 9999976655444 444567888764221111111111110000000000000000 0000001122222
Q ss_pred HHhh--cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHH
Q 013312 240 CLLR--SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (445)
Q Consensus 240 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (445)
+... +++.++...+..+...........+.|.+.++ .|++..+.+.......+..+++. ++.+++.||+++|+.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~~~ 353 (481)
T TIGR00879 276 SSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFT-FVAIFLVDRFGRRPLLL 353 (481)
T ss_pred hcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhcchHHHH
Confidence 1111 12223333333333333344455666776665 79999888888888888888888 77799999999999988
Q ss_pred HHHHHHHHHHHHHHh---cC-C------chh-HHHHHHHHhhhh-hhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHH
Q 013312 318 LGLFAACINMFICSI---SW-S------AWV-PYATTAFSVLVV-FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANI 385 (445)
Q Consensus 318 ~~~~~~~~~~~~~~~---~~-~------~~~-~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 385 (445)
.+..+..++.+.+.+ .. + .+. .....++..+.+ ...+....+..|.+|+++|+++.|+.+...+++++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~ 433 (481)
T TIGR00879 354 IGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANF 433 (481)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHH
Confidence 888877777666652 11 1 122 222233333332 33466677789999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCCC
Q 013312 386 VSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 434 (445)
Q Consensus 386 i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (445)
++|.+.+.+.++. ++.. .+.+.+++++++.+......++++
T Consensus 434 i~~~~~~~~~~~~-------~~~~-~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 434 IVGFLFPTMLESI-------GVGG-VFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHHHhc-------Cccc-eehhHHHHHHHHHHHHheecccCC
Confidence 9999999999875 2222 245555566665665555544443
No 41
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.7e-32 Score=261.35 Aligned_cols=357 Identities=13% Similarity=0.047 Sum_probs=244.5
Q ss_pred hhhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHH-HHHHHHHHHHHHhhhhccccccccCchh
Q 013312 4 EKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSG-FQQAIIGLGTLVMMPVIGNLSDQYGRKA 82 (445)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr~Grr~ 82 (445)
+.|++....++++.++++++...+.+..|.+.+|. +.++.+ ......+ .......+...+++++.|+++||+|||+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~-~~~~~~--~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~ 87 (434)
T PRK15075 11 ESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTF-FPAGNE--FASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRK 87 (434)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCCc--hHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHH
Confidence 34556677788999999999999999999988774 221222 1111111 1222334455678999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHhhcCcchhH--------HHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHh
Q 013312 83 MLTLPLTLSIIPLAILAYRRSISFFY--------AYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLS 154 (445)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 154 (445)
+++.+..+..++.++++++++ ++ .+++.|+++|+ +.+...+...++++|++|+++|++++++.+...+
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~ 163 (434)
T PRK15075 88 GLIVTLSIMASGTLLIAFVPG---YATIGLAAPLLVLLGRLLQGF-SAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQ 163 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhhc-cccccHHHHHHHHHhhCCcccchHHHHHHHHHHH
Confidence 999999999999999999998 55 46899999999 8888888889999999999999999999988877
Q ss_pred hhhhhhhhhhhh------------hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCC
Q 013312 155 ASFVCGTLAARF------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNS 222 (445)
Q Consensus 155 ~g~~~g~~l~~~------------~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (445)
+|..+|+.++.. ++||++|++..... ..........||+++..+++ +
T Consensus 164 ~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~~~~~~~~~~e~~~~~~~~----------------~---- 222 (434)
T PRK15075 164 VAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PFIFLIRRSLEETEEFLARK----------------H---- 222 (434)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHhh----------------h----
Confidence 777666655442 58999998765432 21111112222221100000 0
Q ss_pred CcccccccccchhHHHHHHhhcchhhHH-HHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHH
Q 013312 223 PVKIPVCKKIPSIRDLICLLRSSVTLSQ-AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLL 301 (445)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 301 (445)
+ . +.++.++...+++..+. .....+...........+.|.|+++.+|+++.+.++......++.+++. +
T Consensus 223 ----~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~ 292 (434)
T PRK15075 223 ----R-P----SMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWL-P 292 (434)
T ss_pred ----c-c----ccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-H
Confidence 0 0 00111222223333322 2333334445566678889999998889999998888888888888888 7
Q ss_pred HHHHhhhhhcchhHHHHHHHHHHHHHH-HH-Hh-c-CCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHH
Q 013312 302 FMPLLAPILGEAKLLSLGLFAACINMF-IC-SI-S-WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCI 376 (445)
Q Consensus 302 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 376 (445)
+.|+++||++||+....+..+..+... .. .. . ++...... ..+.+++.+...+....+..|.+|++.|+++.|+.
T Consensus 293 ~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~ 372 (434)
T PRK15075 293 IGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLA 372 (434)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHH
Confidence 789999999999987766544332221 11 11 1 22222222 23445666666677778899999999999999997
Q ss_pred HHHHHH-HHHHHHHHHHHHHHhh
Q 013312 377 SGISSF-ANIVSPLIFSPLTALF 398 (445)
Q Consensus 377 ~~~~~~-g~~i~~~~~g~l~~~~ 398 (445)
+..... ++.++|.+.|++.|+.
T Consensus 373 ~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 373 YSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhc
Confidence 665554 5888999999999986
No 42
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=2.1e-32 Score=258.14 Aligned_cols=375 Identities=12% Similarity=0.139 Sum_probs=270.1
Q ss_pred hHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhH
Q 013312 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (445)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (445)
++|.+...+++.++..++.+...+.+|.+.+| .+.+..+.|++.+.+.++..+++++.|+++||+|||+++.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~ 82 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA--------LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMM 82 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHH--------hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 56788888999999999988888888888754 3666788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---h-hcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhh-hhh
Q 013312 86 LPLTLSIIPLAILA---Y-RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF-VCG 160 (445)
Q Consensus 86 ~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g 160 (445)
.+..+.+++.+++. . .++ ++.+++.|++.|+ +.+...+...+.+.|+.|+++|++++|+.+...++|. .+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~i~G~-g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g 158 (402)
T TIGR00897 83 IGLLLWCVGHAAFIVFGLGHAN---YPLILLFYGIRGL-GYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFG 158 (402)
T ss_pred HHHHHHHHHHHHHHHHhccCcc---HHHHHHHHHHHHc-chHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988876653 2 245 7888899999999 7777777888889999999999999999999999996 578
Q ss_pred hhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhH
Q 013312 161 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (445)
Q Consensus 161 ~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (445)
|.+++. ++|+..++.......+..++..+..+|.+++++++ + ++ +.++.+
T Consensus 159 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------------~~----~~~~~~ 212 (402)
T TIGR00897 159 SYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ-T---------------------RE----KFSELG 212 (402)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc-C---------------------Cc----chhhHH
Confidence 888764 47665555444333333333334445432211110 0 00 000112
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHH
Q 013312 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (445)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (445)
+..+..+++|.++...+..++.........++.|.|.++ +|+++.+.+.+.....++..++. +..|+++||++||+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 213 KAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFN-VIFGIVGDKLGWMNTV 290 (402)
T ss_pred HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHhhcchhHH
Confidence 223345677888777777777777777888899999976 89999999998888999999988 7779999999988765
Q ss_pred H-HHHHHHHHHHHHHHh-----cCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHH
Q 013312 317 S-LGLFAACINMFICSI-----SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPL 389 (445)
Q Consensus 317 ~-~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~ 389 (445)
. .+.....++...+.. .++.+.... ..+.|++.+...+ ......+. ++++||++.|+.+...++++.++|.
T Consensus 291 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~ 368 (402)
T TIGR00897 291 RWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPA 368 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHH
Confidence 3 333333333222221 123333322 3555666655444 34555665 4578999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013312 390 IFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 430 (445)
Q Consensus 390 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (445)
+.|.+.|.. ++.. .+.+.+++.+++.....++|
T Consensus 369 i~g~l~~~~-------g~~~-~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 369 IAVLFIGFF-------GAIG-VVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHHHHHhhc-------chHH-HHHHHHHHHHHHHHHHHHhc
Confidence 999999976 3333 35555566666666555543
No 43
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=2e-32 Score=260.74 Aligned_cols=379 Identities=16% Similarity=0.193 Sum_probs=307.5
Q ss_pred hHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhH
Q 013312 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (445)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (445)
+++.+..++.+.+++.++..+....++.++.+. +-|+...|++.++..+...+.+++.|.++||++||++++
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~l--------t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAWLVTQL--------TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 357788899999999999999999999988653 455678899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh--cCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhh
Q 013312 86 LPLTLSIIPLAILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (445)
Q Consensus 86 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (445)
.+.++.++..+..++. .+....+.+++.-++.|+ +.+...|+.++++.|.+|+++..+++++.+...++..++||.+
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~-~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal 158 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGI-GSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH
Confidence 9998877665554432 111127889999999999 8999999999999999999999999999999999999999999
Q ss_pred hhhh----chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHH
Q 013312 164 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (445)
Q Consensus 164 ~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (445)
+|.+ |-.+.|.+.++..++.... ....+.++++++. ..++..+.+++.+
T Consensus 159 gG~Lva~~G~~~~f~inalsfl~~i~~-l~~~~~~~~~~~~--------------------------~~e~~~~~l~~G~ 211 (524)
T PF05977_consen 159 GGILVAFFGAAAAFLINALSFLISILA-LLRWKPPPPPSSL--------------------------PRERFFSALREGL 211 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcccccccccc--------------------------chhhhhhhHHHHH
Confidence 9873 7788899888765554333 3444432211111 1112234667778
Q ss_pred HHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 013312 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (445)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (445)
+..+++|.+...+...++.++........+|.+.++.+|.++...|++.+..+++.++++ ++.+++.+|+++++++..+
T Consensus 212 ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Ga-l~~~~l~~~~~~~~lv~~~ 290 (524)
T PF05977_consen 212 RYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGA-LLLPRLRRRLSSRRLVLLA 290 (524)
T ss_pred HHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCcchhhHHH
Confidence 888888888877777777777666778889999999999999999999999999999999 7778999999999999999
Q ss_pred HHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 320 LFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.+..+++.+.+++.++.|..... ++.|++........++..++..|++.||++++++++....+..+|..+.|.+.++.
T Consensus 291 ~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 291 SLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999988888888888766654 66788888888899999999999999999999999999999999999999999986
Q ss_pred hcCCCCcccchhHHHHHHHHHHHHHHHHHhc
Q 013312 399 LSKGAPFNFPGFSIMCIGLASMVAFIQSLMM 429 (445)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (445)
+... .+.+.++..+++.+.....
T Consensus 371 -------g~~~-al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 371 -------GVRT-ALLIAGAALLLSALIALRF 393 (524)
T ss_pred -------CHHH-HHHHHHHHHHHHHHHHHHh
Confidence 3333 3455555555555544433
No 44
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.1e-32 Score=262.96 Aligned_cols=367 Identities=13% Similarity=0.104 Sum_probs=252.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCc-chhHHHHHHHHHhhhccchhH
Q 013312 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGSI 125 (445)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~g~~ 125 (445)
+.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.++.++. ..++.+.+.|++.|+ +.+..
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~-~~g~~ 135 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGW-FQGMG 135 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH-Hhhcc
Confidence 6667889999999999999999999999999999999999999999998887765321 116778899999999 77888
Q ss_pred HHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh-----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 013312 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (445)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~ 200 (445)
++.....+.|++|+++|++++++.+...++|..++|.+.+. .+||+.|++.++++++..+..++.+||++++.+.
T Consensus 136 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 215 (438)
T TIGR00712 136 WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL 215 (438)
T ss_pred hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC
Confidence 88888999999999999999999999999998888765432 4899999999988877776777778886543221
Q ss_pred cCCccccchhhhcccccCCCCCCcccccccccchhHHH-HHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCC
Q 013312 201 DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 279 (445)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (445)
++..+ .+++..++..+ +.+++ .+.++. .+...+++.++...+..++.....+....+.|.|+++..|+
T Consensus 216 ~~~~~-----~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 284 (438)
T TIGR00712 216 PPIEE-----YRNDYPDDYNE-----KAEQE-LTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHF 284 (438)
T ss_pred CCchh-----ccccccccccc-----ccccc-cchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCC
Confidence 11000 00000000000 00000 011221 22356777788777776666667677888999999988899
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH---HHHHHHHHhcC--CchhHHH-HHHHHhhhhhhh
Q 013312 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA---CINMFICSISW--SAWVPYA-TTAFSVLVVFAT 353 (445)
Q Consensus 280 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~~ 353 (445)
++.+.++......+..+++. +..+++.||+++++....+.... .++.+.+...+ +.+.... .+..+.+.....
T Consensus 285 s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 363 (438)
T TIGR00712 285 ALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPV 363 (438)
T ss_pred ChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHH
Confidence 99999999999999999988 78899999996433222222221 11222222221 2232222 122333222222
Q ss_pred hhHHHHHhcccCCccchhHHHHHHHHHHHHH-HHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCC
Q 013312 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFAN-IVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 432 (445)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (445)
........|.+|+++||++.|+.+...++++ .++|.+.|.+.|+. ++.. .+.+..++.+++.+......++
T Consensus 364 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-------g~~~-~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 364 MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-------GWDG-GFMVMIGGSILAVILLIVVMIG 435 (438)
T ss_pred HHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc-------cchH-HHHHHHHHHHHHHHHHHHHHhh
Confidence 2223457789999999999999999988875 68999999999976 3333 3455555555666666655555
Q ss_pred CC
Q 013312 433 PA 434 (445)
Q Consensus 433 ~~ 434 (445)
++
T Consensus 436 ~~ 437 (438)
T TIGR00712 436 EK 437 (438)
T ss_pred cc
Confidence 43
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=4e-32 Score=256.38 Aligned_cols=342 Identities=13% Similarity=0.098 Sum_probs=253.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHH
Q 013312 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (445)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 93 (445)
.+..+...++..++.|.+|.+.++ ++.+..+.++..+++.+++.++++++|+++||+|||++++.+.++.++
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~--------~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRD--------FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 334455666788999999987644 456667789999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hch
Q 013312 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LST 169 (445)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w 169 (445)
+.+++.++++ ++.++++|+++|+ +.+...+...+++.|++|+++|++++++......+|..+||.+++. .+|
T Consensus 94 ~~~~~~~a~~---~~~l~~~r~l~Gi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw 169 (413)
T PRK15403 94 ACAATLFTTS---MTQFLIARFIQGT-SICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW 169 (413)
T ss_pred HHHHHHHcCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 9999999999 9999999999999 7776667778899999999999999999999999999999988875 489
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhH
Q 013312 170 TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLS 249 (445)
Q Consensus 170 ~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (445)
|+.|++.+++.++..+..++.+||++++++++ ...++..++ .+...++|.++
T Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~---------------------------~~~~~~~~~-~~~ll~~~~~~ 221 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLLLAMPETVKRGAVP---------------------------FSAKSVLRD-FRNVFRNRLFL 221 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccccCCC---------------------------CChHHHHHH-HHHHHcCHHHH
Confidence 99999999887777666566778764321110 000011223 33355778888
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHH
Q 013312 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (445)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (445)
...+..++.......+..+.|.++++.+|+++.+.++.......+..++. .+.+++.+|..+++.......+..++..+
T Consensus 222 ~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~-~l~~~~~~~~~~~~~~~~~~~~~~ig~~l 300 (413)
T PRK15403 222 TGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVAN-AIVARFVKDPTEPRFIWRAVPIQLVGLAL 300 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhccCCchhHHHHHHHHHHHHHHH
Confidence 77777777777777777888999999889999999998877777777777 44455544433333332222222222222
Q ss_pred HH----hcCCchh--HHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 330 CS----ISWSAWV--PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 330 ~~----~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
+. ...+.+. .....+.+++.+...|...+..-. -.+..+|++.++.+.....+...++...|++.++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 301 LIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 21 1233332 223466678888888877754322 1223479999999999999999999999988775
No 46
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.1e-33 Score=265.71 Aligned_cols=359 Identities=14% Similarity=0.082 Sum_probs=265.0
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHH
Q 013312 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (445)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 96 (445)
.+..+.......+..|.+.+ +++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~--------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 75 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVE--------EIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNL 75 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHH--------HhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHH
Confidence 44556667777777887754 3466678899999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhh-hhhhh----hchhh
Q 013312 97 ILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT-LAARF----LSTTS 171 (445)
Q Consensus 97 ~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~l~~~----~~w~~ 171 (445)
+++++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..++| .++.. .+||+
T Consensus 76 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 151 (379)
T TIGR00881 76 FFGFSTS---LWVMAALWALNGI-FQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHW 151 (379)
T ss_pred HHHHhhh---HHHHHHHHHHHHh-hccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchh
Confidence 9999999 9999999999999 88888899999999999999999999999999999999998 34433 48999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHH
Q 013312 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQA 251 (445)
Q Consensus 172 ~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (445)
.|++.+++.++..+...+..||++++++.+++.++.. ++.+.+ .++.+++.+..+...+...++|.++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (379)
T TIGR00881 152 VFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN--------EEPDGD--AEKKEEELTKKQIFLQYVLLNKVLWYI 221 (379)
T ss_pred HHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc--------cccccc--cccccccccchHHHHHHHHhcchHHHH
Confidence 9999888777766666667777654332211110000 000000 000011111222233445677778877
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc-hhH-HHHH-HHHHHHHHH
Q 013312 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKL-LSLG-LFAACINMF 328 (445)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~~~~-~~~~~~~~~ 328 (445)
.+..++..........+.|.|+++.+|+++.+.+.......++.+++. ++.+++.||..+ |+. .... ......+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
T TIGR00881 222 SLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGT-LLAGWLSDKLFNGRRGPLAVFFMALIIVSLL 300 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhH-HHHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Confidence 777777777778888999999998899999999999999999999988 788999998643 332 2221 122222222
Q ss_pred HHHhcC--CchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 329 ICSISW--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 329 ~~~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.....+ +.+.... ..+.+.......+....+..|.+|+++||++.|+.+...++|..++|.+.|.+.|+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 373 (379)
T TIGR00881 301 VYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF 373 (379)
T ss_pred HHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence 222211 2222222 244455444555666778899999999999999999999999999999999999976
No 47
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=3.8e-33 Score=263.84 Aligned_cols=368 Identities=16% Similarity=0.154 Sum_probs=264.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHH
Q 013312 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (445)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 90 (445)
...++..+...++.....+..|.+.+ +++.+..+.|++.+.+.++..++.++.|+++||+|||+.+..+.++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 20 ILSFLIMLMDGYDLAAMGFAAPAISA--------EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhh--------ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 33444555555666667777777764 3466667889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----
Q 013312 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---- 166 (445)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~---- 166 (445)
.+++.++..++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..++|.+++.
T Consensus 92 ~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 92 FSVFTLLCALATN---VTQLLILRFLAGL-GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred HHHHHHHHHHccc---hHHHHHHHHHHhc-ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 9999999999998 8999999999999 8888889999999999999999999999999999999999988865
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCC--ccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhc
Q 013312 167 LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL--TRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (445)
Q Consensus 167 ~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (445)
.+|++.|++.+++..+..++....+||+++...++++ .++..++..+....+++. +.. +..++.+..++..+.+++
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 245 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQS-ALP-EQKATQGTKRSVFKALFQ 245 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccc-ccc-ccccccchhhHHHHHHhc
Confidence 4899999988766666666666778887643222111 011111111110000000 000 000111112222222222
Q ss_pred c---hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 013312 245 S---VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (445)
Q Consensus 245 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (445)
+ +..+......++..........+.|.+.+ ..|+++.+.+.......++.+++. ++.+++.||+++|+.......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~ 323 (398)
T TIGR00895 246 GKTARITVLLWLLYFMLLVGVYFLTNWLPKLMV-ELGFSLSLAATGGALFNFGGVIGS-IIFGWLADRLGPRVTALLLLL 323 (398)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcchHHHHHHHHH
Confidence 2 22333344444555566666778885554 489999999999999999999988 888999999999855444443
Q ss_pred HHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 322 AACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 394 (445)
......+......+.+.... .++.+++.+...+...++..|.+|+++||++.|+.+....+|..++|.+.|++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 324 GAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 33333333332344443333 46778888888999999999999999999999999999999999999999875
No 48
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=4.3e-32 Score=257.41 Aligned_cols=347 Identities=14% Similarity=0.095 Sum_probs=262.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
.+..+.+..++..+......+.+|.+. ++++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~--------~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQ--------QAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 345566667777888888889999885 344677789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---HhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhh
Q 013312 89 TLSIIPLAIL---AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (445)
Q Consensus 89 ~~~~~~~~~~---~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (445)
.+++++.+++ .++++ ++.++++|+++|+ +.+...+..++++.|+.|+++|.+.++..+..+.+|..+||.++.
T Consensus 99 ~~~~~~~~l~~~~~~a~~---~~~ll~~r~l~G~-g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 99 FLYALGAALFWPAAEIMN---YTLFLVGLFIIAA-GLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHH-HHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999886 45778 9999999999999 889999999999999887777777899999999999999887753
Q ss_pred h------------------------------hchhhHHHHHH-HHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcc
Q 013312 166 F------------------------------LSTTSAFQAAT-IVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEG 214 (445)
Q Consensus 166 ~------------------------------~~w~~~f~~~~-~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 214 (445)
. .+||++|+... +..++..+......||.++++++
T Consensus 175 ~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~-------------- 240 (438)
T PRK10133 175 SLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS-------------- 240 (438)
T ss_pred HHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--------------
Confidence 2 24566665433 33223322222333432111000
Q ss_pred cccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHH-HhhcCCchhhHHHHHHHHHH
Q 013312 215 VNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL-KAQFHFNKNQFADLMLIAGL 293 (445)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~g~~~~~~~~ 293 (445)
. + +..+..++ .+.+.++|.++...+..++..........+.+.|+ ++.+|+++.+.+..+....+
T Consensus 241 ----------~-~--~~~~~~~~-~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~ 306 (438)
T PRK10133 241 ----------D-A--KQGSFSAS-LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMV 306 (438)
T ss_pred ----------c-c--cccchhhh-HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHH
Confidence 0 0 00001111 22244566666666666666667777777888885 56689999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHH
Q 013312 294 AGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQ 373 (445)
Q Consensus 294 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 373 (445)
+.++++ +..+++.||+++|+.+..+..+..+.+++..+.++.+......+.+++.+..+|..++...+..|+ +.+++.
T Consensus 307 ~~~vG~-~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as 384 (438)
T PRK10133 307 CFFIGR-FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGS 384 (438)
T ss_pred HHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccch
Confidence 999998 888999999999999888877777666665555554444445778999999999999999998874 567888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 374 GCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 374 g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
++.. +..+|+.++|.+.|.+.|..
T Consensus 385 ~l~~-~~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 385 SFIV-MTIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred hHHh-HHhccchHHHHHHHHHHHhc
Confidence 8776 45578899999999998875
No 49
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=5e-32 Score=255.48 Aligned_cols=351 Identities=15% Similarity=0.104 Sum_probs=265.7
Q ss_pred CcchhhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCc
Q 013312 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (445)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 80 (445)
|+.++.+|.+.......++..+......|.+|.+.++ ++.+..+.+++.+++.++..+++++.|+++||+||
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~--------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~gr 72 (394)
T PRK11652 1 MKRQRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARD--------LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGR 72 (394)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCC
Confidence 5545556666666777777778888889999988744 46777889999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhh
Q 013312 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (445)
Q Consensus 81 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (445)
|+++..+....+++.+++.++++ ++.+++.|++.|+ +.+...+....+..|.+++++|+++.+..+.+..+|..+|
T Consensus 73 r~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 148 (394)
T PRK11652 73 RPVILVGMSIFILGTLVALFAHS---LTVLIAASAIQGL-GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLA 148 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHh-hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999 7777778888999999999999999999999999999898
Q ss_pred hhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhH
Q 013312 161 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (445)
Q Consensus 161 ~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (445)
|.+++. .+||+.|++.++..++..+...+..||++++++++ ++.+
T Consensus 149 ~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~ 197 (394)
T PRK11652 149 PLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARR-------------------------------TRVL 197 (394)
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccch-------------------------------hHHH
Confidence 888765 48999999988776666555556677754322110 0112
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHH
Q 013312 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (445)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (445)
+.++...++|.++...+..+........+....+.++++.+|+++.+.++.......+..++. .+.+++.||.+++...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~~~~~~~~ 276 (394)
T PRK11652 198 ASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGA-WFAGRPNKRFSTLMWQ 276 (394)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 223335566666655555555555555566777888888889999999998888888887777 7778999988743332
Q ss_pred HH-HHHHHHHHHHHHHh--cCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 013312 317 SL-GLFAACINMFICSI--SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (445)
Q Consensus 317 ~~-~~~~~~~~~~~~~~--~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 392 (445)
.. +.....+....... ..+.+.... ..+.+++.+...|...++..|..| +++|++.++.+....+|..+++.+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~ 355 (394)
T PRK11652 277 SVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSA 355 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 22222222222222 123343333 366788888889999999998887 67899999999999999999998888
Q ss_pred HHHH
Q 013312 393 PLTA 396 (445)
Q Consensus 393 ~l~~ 396 (445)
.+.+
T Consensus 356 ~~~~ 359 (394)
T PRK11652 356 MLPQ 359 (394)
T ss_pred HccC
Confidence 7654
No 50
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=6.2e-32 Score=254.18 Aligned_cols=373 Identities=13% Similarity=0.123 Sum_probs=260.4
Q ss_pred hhhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhH
Q 013312 4 EKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAM 83 (445)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~ 83 (445)
++.++..+.+++..++..++..+..|.+|.+.+ ++++.+..+.|++.+...+...+.+++.|.++||+||||.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~-------~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~ 83 (393)
T PRK15011 11 KSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLT-------DEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKS 83 (393)
T ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-------hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhH
Confidence 334556677788899999999999999999985 3456777889999877666555555555555999999987
Q ss_pred h-HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccch--hhHHHHHHHHHhhhhhhh
Q 013312 84 L-TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQR--ASAFGILLGVLSASFVCG 160 (445)
Q Consensus 84 l-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g 160 (445)
+ ..+.+..+++..+.+++++ ++.+++.+.+.|. ..+...|...+++.|+.++++| +...++.+...++|.++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g 159 (393)
T PRK15011 84 LIVFCCLLGVLACTLFAWNRN---YFVLLFVGVFLSS-FGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIG 159 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHH-HHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHh
Confidence 5 4566666777888888888 7777666555554 3456678889999998876655 344578888889999999
Q ss_pred hhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhH
Q 013312 161 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (445)
Q Consensus 161 ~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (445)
|.+++. +|||..|++.++..++..+..++.+||.++++++.+ + + . + ..+
T Consensus 160 ~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~----~-~------~~~ 212 (393)
T PRK15011 160 PPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT---------------G-T----L-E------APR 212 (393)
T ss_pred hHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc---------------c-c----c-c------ccc
Confidence 988875 499999999988877777776677887643322110 0 0 0 0 000
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHH
Q 013312 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (445)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (445)
.+++..+...............+..+.|.|+++.+|+++.+.+.+........+++. ++.|+++||+++|+.+
T Consensus 213 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~G~l~dr~g~~~~~ 285 (393)
T PRK15011 213 ------RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTM-LIAGYFAKRLGKRFLM 285 (393)
T ss_pred ------cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHH
Confidence 011222222333333334445566789999988899999999988887777777776 7889999999999987
Q ss_pred HHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 317 SLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (445)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 395 (445)
..+.....+........++.+..... .+.+++.+...+....+..|..| +++|++.++.+...++|..++|.+.|.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~ 364 (393)
T PRK15011 286 RVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVA 364 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666555554444444444433332 34445555555666677788887 56999999999999999999999999999
Q ss_pred HhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013312 396 ALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 430 (445)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (445)
|+. ++.. .+.+.+++.+++++..+..+
T Consensus 365 ~~~-------g~~~-~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 365 EIW-------NYHA-VFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHh-------hhHH-HHHHHHHHHHHHHHHHHhhc
Confidence 975 3333 34556666666666666554
No 51
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-32 Score=243.88 Aligned_cols=376 Identities=15% Similarity=0.104 Sum_probs=304.5
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
+|+++.-.+...+....+.+..|+.+.+. +++++|..|.+++.++..+...+..++.|.+.||||.|++...
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i~--------~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~ 84 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFIK--------SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTIL 84 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhc--------cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHH
Confidence 55666666766777777777777777773 6779999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhh----hhhhh
Q 013312 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF----VCGTL 162 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~----~~g~~ 162 (445)
+.++..+-++..+++.+.+.++++++.+++.|+ +++ ...+...++++++|||++|.++|+.. ..++|. .++|.
T Consensus 85 s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~-~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~ 161 (417)
T COG2223 85 SMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGL-AGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL 161 (417)
T ss_pred HHHHHHHHHHHHHHHccCCchHHHHHHHHHHhc-ccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH
Confidence 999999999999999875556799999999999 544 44789999999999999999999999 777775 45677
Q ss_pred hhhhhc---hhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHH
Q 013312 163 AARFLS---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (445)
Q Consensus 163 l~~~~~---w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (445)
+....+ ||..-.+..+..++..+..++...|.|+.+...++ .. + +..
T Consensus 162 v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~---------------------------~~-~--~~~ 211 (417)
T COG2223 162 VAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKP---------------------------QL-P--AQL 211 (417)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccc---------------------------cc-h--hHH
Confidence 777777 99988888888778788888888887764332200 00 0 234
Q ss_pred HHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 013312 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (445)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (445)
+...++++.|.+.+.++....++.++..++|.|+++++|.++.++|.+.....+.+.+.+ .++|+++||+|.+|.+...
T Consensus 212 ~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~R-p~GG~LsDR~Gg~rv~~~~ 290 (417)
T COG2223 212 KAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALAR-PLGGWLSDRIGGRRVTLAV 290 (417)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHH-hccchhhhhccchhHHHHH
Confidence 446778899999999999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHHHHHhcC-------CchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHH
Q 013312 320 LFAACINMFICSISW-------SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF 391 (445)
Q Consensus 320 ~~~~~~~~~~~~~~~-------~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 391 (445)
+..++++.....+.. +.+.... ....++..+..+...+.++...+| ++.|.+.|+...++.+|+..-|...
T Consensus 291 f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~ 369 (417)
T COG2223 291 FVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAF 369 (417)
T ss_pred HHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHH
Confidence 988888887777654 2222222 244456666667777777777776 5889999999999999999999999
Q ss_pred HHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCC
Q 013312 392 SPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 432 (445)
Q Consensus 392 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (445)
|..++.+ +.....+.+...+.+++.+..+....+
T Consensus 370 g~~~~~t-------g~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 370 GVSLDLT-------GSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHhc-------ccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999987 333334666666677777666554443
No 52
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.9e-31 Score=251.36 Aligned_cols=343 Identities=16% Similarity=0.130 Sum_probs=257.5
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (445)
|.+....+..+....+.++..+.+|.+.++ ++.+..+.++..+.+.++..+++++.|+++||+|||+.+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~ 74 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD--------LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPG 74 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHH
Confidence 455666777788888888999999999754 356667889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh-
Q 013312 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (445)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~- 166 (445)
.++.+++...+.++++ ++.+++.|+++|+ +.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.
T Consensus 75 ~~~~~i~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 75 AALFIIASLLCSLAET---SSLFLAGRFLQGI-GAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred HHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 8899999999999 8888888999999999999999999999999999999999988765
Q ss_pred ---hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhh
Q 013312 167 ---LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (445)
Q Consensus 167 ---~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (445)
.+||+.|++.+++.++..++..+.+||++++++++ + .+ ..++..+ ..
T Consensus 151 ~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------------------------~-~~---~~~~~~~-~~ 200 (392)
T PRK10473 151 MLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPA-------------------------A-SS---KPRENSE-SL 200 (392)
T ss_pred HhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCC-------------------------c-cc---hHHHHHH-HH
Confidence 48999999998887777776667777764322110 0 00 0111112 23
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (445)
+++.++...+...+.......+..+.|.+.++.+|+++.+.+......++..+++. +..+++.||+++|+.+..+..+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~-~~~~~l~~r~g~~~~~~~~~~~~ 279 (392)
T PRK10473 201 LNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVS-FSTPFALGIFKPRTLMLTSQVLF 279 (392)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHH
Confidence 44544444444433333444556667888888889999999999999999999988 77799999999999998888888
Q ss_pred HHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 324 CINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.++.+.+...++.+.... ..+.+.+.+...+.. ...+..|.++|+ |..+....++..+++.+.+++.++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 280 LAAGITLALSPSHAVSLFGITLICAGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777666554443222 233344444333333 223344544443 4444556678888888888888876
No 53
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=1.2e-32 Score=268.26 Aligned_cols=364 Identities=17% Similarity=0.157 Sum_probs=258.5
Q ss_pred cchhhH---HHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhc
Q 013312 44 DECSLA---IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMV 120 (445)
Q Consensus 44 ~~~~~s---~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 120 (445)
+|++++ ..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.+++++ ++.+++.|++.|+
T Consensus 117 ~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~r~l~G~- 192 (505)
T TIGR00898 117 TEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPN---YTVFLVFRLLVGM- 192 (505)
T ss_pred EEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHccc---HHHHHHHHHHHHh-
Confidence 566777 788999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred cchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh-chhhHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 013312 121 CEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-STTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (445)
Q Consensus 121 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~ 199 (445)
+.+...+...+++.|++|+++|+++.++......+|.+++|.++..+ +||+.|++.+++.++..+.. +.+||+|+...
T Consensus 193 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~-~~~~esp~~l~ 271 (505)
T TIGR00898 193 GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLS-WFVPESPRWLI 271 (505)
T ss_pred hccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HhcCCChHHHH
Confidence 88888899999999999999999999999999999999999988764 79999999998877665554 77899876432
Q ss_pred CcCCcc---ccchhhhcccccCCCCC---Cc-cc--ccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHH
Q 013312 200 DDDLTR---PIITEETEGVNQNESNS---PV-KI--PVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFL 270 (445)
Q Consensus 200 ~~~~~~---~~~~~~~~~~~~~~~~~---~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (445)
.+++.+ +..++..+.++.+...+ .. .+ ...+++...+ .++++|.++...+...+..+.........+
T Consensus 272 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (505)
T TIGR00898 272 SQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFL----DLFRTPNLRKTTLCLMMLWFTTAFSYYGLV 347 (505)
T ss_pred HCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHH----HHhCChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222211 11111111111100000 00 00 0001111222 345666666555554444433333333334
Q ss_pred HHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCc--hhHHH-HHHHHh
Q 013312 271 YFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA--WVPYA-TTAFSV 347 (445)
Q Consensus 271 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~g~ 347 (445)
.+..+ .+.+... .....++..+++. ++.+++.||+|||+.+..+.++.+++.+.+.+.++. +.... ..+.++
T Consensus 348 ~~~~~-~~~~~~~---~~~~~~~~~i~~~-~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 422 (505)
T TIGR00898 348 LDLGN-LGGNIYL---DLFISGLVELPAK-LITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKF 422 (505)
T ss_pred ccccc-cCCChHH---HHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Confidence 44433 4555433 2334456666666 777899999999999999988888887777766543 33322 344556
Q ss_pred hhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHH
Q 013312 348 LVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 427 (445)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (445)
+.+..++..+.+.+|.+|++.|+++.|+.+....+|++++|.+.+ +.+.. ...++.+.+++.+++.+...
T Consensus 423 ~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~ 492 (505)
T TIGR00898 423 GITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKW---------LFLPLVLFGGLALLAGILTL 492 (505)
T ss_pred HHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHH---------HhhHHHHHHHHHHHHHHHHH
Confidence 677778888999999999999999999999999999999999988 43321 12234555556666655555
Q ss_pred hccC
Q 013312 428 MMSH 431 (445)
Q Consensus 428 ~~~~ 431 (445)
.+++
T Consensus 493 ~lpe 496 (505)
T TIGR00898 493 FLPE 496 (505)
T ss_pred cCcC
Confidence 5543
No 54
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=5.7e-32 Score=263.06 Aligned_cols=368 Identities=14% Similarity=0.162 Sum_probs=258.8
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
++.+..+++..++..++.....+.+|.+.++ ++.+..+.+++.+.+.++..++.++.|+++||+|||+.+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 19 WKAFSAAWLGYLLDGFDFVLITLVLTEVQGE--------FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 3466677888888899999999999888643 46677888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
+.++.+++.++++++++ ++.+++.|++.|+ +.+...+...+++.|.+|+++|+++++.......+|..++|.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 91 SIVLFSVGTLACGFAPG---YWTLFIARLVIGM-GMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999 8888888999999999999999999999999999999999988765
Q ss_pred ----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhH------
Q 013312 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR------ 236 (445)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 236 (445)
.+||+.|++..+..+ ..+.....+||+++.++++++.++..+..+.. . ....+......
T Consensus 167 l~~~~~w~~~f~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~ 235 (496)
T PRK03893 167 VVPVWGWRALFFIGILPII-FALWLRKNLPEAEDWKEKHAGKAPVRTMVDIL-----Y-----RGEHRIINILLTLAAAA 235 (496)
T ss_pred HhccCCHHHHHHHHHHHHH-HHHHHHHhCCCchhhhhhccccccchhHHHHH-----h-----cchhHHHHHHHHHHHHH
Confidence 489999987654433 23333345565433211110000000000000 0 00000000000
Q ss_pred ---HHHHH--------------------------h-hcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHH
Q 013312 237 ---DLICL--------------------------L-RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD 286 (445)
Q Consensus 237 ---~~~~~--------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 286 (445)
..... . .+.+.........+...........++|.|+++.+|+++.+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~ 315 (496)
T PRK03893 236 ALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVAN 315 (496)
T ss_pred HHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHH
Confidence 00000 0 00000111111111111111234678999998778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCc--hhHHHH-HHHHhhhhhhhhhHHHHHhcc
Q 013312 287 LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA--WVPYAT-TAFSVLVVFATPSFRSIVSKQ 363 (445)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~g~~~~~~~~~~~~~~~~~ 363 (445)
+.+...++.+++. +..+++.||+++|+.+..+..+..+..+......+. +..... .+.+.......+...++++|.
T Consensus 316 ~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (496)
T PRK03893 316 VLFFSGFGAAVGC-CVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGY 394 (496)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhh
Confidence 9999999999988 788999999999998887776666555443333222 222222 222233333456667788999
Q ss_pred cCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 364 VGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 364 ~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+|+++||+++|+.+....+|..++|.+.|.+.|++
T Consensus 395 ~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~ 429 (496)
T PRK03893 395 FDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL 429 (496)
T ss_pred CCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999876
No 55
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=1.2e-31 Score=251.18 Aligned_cols=363 Identities=12% Similarity=-0.009 Sum_probs=275.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH-
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL- 88 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~- 88 (445)
.+.+.+..+..+.+.++..|.+|.+.+| .+.+..++|++.+++.+...++++++|+++||+|||+......
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~--------~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 77 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKG--------IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLA 77 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 3456777888888899999999999864 4677789999999999999999999999999999854332211
Q ss_pred HHHHHH-HHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh-
Q 013312 89 TLSIIP-LAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (445)
Q Consensus 89 ~~~~~~-~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~- 166 (445)
....+. ...+..+++ ++.+++.|.++|. +.+...|...++..|+ +++|+++++......++|.++||.+++.
T Consensus 78 ~~~~l~~~~~~~~~~~---~~~l~~~~~l~~~-~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l 151 (382)
T TIGR00902 78 LASAIFAAAFSAGAHN---AWLLFIAIGLFAL-FFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGL 151 (382)
T ss_pred HHHHHHHHHHHHhhhh---HHHHHHHHHHHHH-HHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 111111 123446777 8999999999998 6666778888887664 4788999999999999999999988776
Q ss_pred ---hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhh
Q 013312 167 ---LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (445)
Q Consensus 167 ---~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (445)
+|||..|++...... ..+.. +.++|+++++++++ +++.+ ..++ .+...
T Consensus 152 ~~~~g~~~~f~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-----------------------~~~~~---~~~~-~~~~l 202 (382)
T TIGR00902 152 IGMFDEQNILAILTAGLA-FMLIG-FLIKPTIPPKDAIP-----------------------EDESQ---GDSA-FIALL 202 (382)
T ss_pred HHHcChhHHHHHHHHHHH-HHHHH-HHcCCCCCCCcccc-----------------------ccccc---cchh-HHHHH
Confidence 499999988765532 22222 33444322111110 00000 1112 22245
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (445)
|+|+++...+..++.......+..+.|.|+++ .|.++.+.|.......+..++.. ...+++.||+++|+.+..+.+..
T Consensus 203 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~-~~~~~l~~r~g~~~~l~~~~~~~ 280 (382)
T TIGR00902 203 KNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIF-AFSNKLFQNCSARDLLLISAIAC 280 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHhHHHHhhCCHHHHHHHHHHHH
Confidence 77888888888888888888889999999987 79999999999998888887776 88899999999999999999999
Q ss_pred HHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHH-HHHHHHHHHHHHHHHHHHhhhcC
Q 013312 324 CINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISG-ISSFANIVSPLIFSPLTALFLSK 401 (445)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~~~~~ 401 (445)
.+....+.+.++.+.++.. .+.++..+...+....++++. |++++++.+++++. ...+|..++|.+.|+++|+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~--- 356 (382)
T TIGR00902 281 VGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL--- 356 (382)
T ss_pred HHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 9999998888887766654 888999999999999999988 99999999999874 56799999999999999986
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHH
Q 013312 402 GAPFNFPGFSIMCIGLASMVAFIQSL 427 (445)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (445)
+. . .+...+.+.+++.+...
T Consensus 357 ----g~-~-~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 357 ----GA-G-TFVFMAIIAAAAFFLIP 376 (382)
T ss_pred ----cH-H-HHHHHHHHHHHHHHHHH
Confidence 32 2 35556666666554433
No 56
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=9.3e-32 Score=258.31 Aligned_cols=377 Identities=12% Similarity=0.064 Sum_probs=252.0
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (445)
+.+...+...+....+.....|.+|.+.+| ++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~ 107 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDN--------LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFL 107 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 344555556666666667777888888643 466677889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh---
Q 013312 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA--- 164 (445)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~--- 164 (445)
.++.+++.++++++++ ++.+++.|++.|+ +.+... ....+++|++|+++|++++++.....++|..+++.+.
T Consensus 108 ~~~~~~~~~~~~~~~s---~~~l~~~r~l~G~-~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 108 LMLTAPAVFCMSLVSS---ATGFIAVRFFIGF-SLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred HHHHHHHHHHHHHhcC---HHHHHHHHHHHHH-HHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 8999999999999 666543 4567899999999999999999876666666554332
Q ss_pred -h---------hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccch
Q 013312 165 -R---------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 234 (445)
Q Consensus 165 -~---------~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (445)
. ..+||+.|++.+++.++..+...+..++.|+.+.++ .. ++.+ . ++.+
T Consensus 183 ~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~---------~~----~~~~----~-----~~~~ 240 (476)
T PLN00028 183 FPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRE---------LK----KSGT----M-----PKDS 240 (476)
T ss_pred HHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhh---------HH----hcCc----c-----cccc
Confidence 2 148999999999888776665544443333211000 00 0000 0 0001
Q ss_pred hHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchh
Q 013312 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (445)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (445)
..+.++...+++..+...+..+...........+.|.|+.+.+|+++.+.+.+.+...++.+++. ++.|+++||+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~~~r~ 319 (476)
T PLN00028 241 FSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFAR-PAGGYLSDVAARRF 319 (476)
T ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHhc
Confidence 11222333455666655555555555555667789999988889999999999999999999998 88899999998651
Q ss_pred -------HHHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHH
Q 013312 315 -------LLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 386 (445)
Q Consensus 315 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 386 (445)
.......+..+..+.+...++.+.... ..+++++.+...+...++..+.. ++++|++.|+.+...++|+.+
T Consensus 320 ~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i 398 (476)
T PLN00028 320 GMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVL 398 (476)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHH
Confidence 222333333333333333444333222 34455555555555666666654 478999999987766666666
Q ss_pred HHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013312 387 SPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 430 (445)
Q Consensus 387 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (445)
+|.+ .+.. + .. ++.. .+.+.+++.+++.+..+..+
T Consensus 399 ~~~l----~~~~-~-~~--~y~~-~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 399 TQLL----FFTG-S-SY--STET-GISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHH----HHhc-C-Cc--cHhh-HHHHHHHHHHHHHHHHHhee
Confidence 6554 3321 0 00 1222 35555666666666665554
No 57
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=2.9e-32 Score=262.53 Aligned_cols=400 Identities=11% Similarity=0.032 Sum_probs=274.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc--------------CCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccc
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMAL--------------CPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNL 74 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l 74 (445)
....++++..+.+.+........+...++.- +....|++.+..+.|++.+.+.+++.+++++.|++
T Consensus 20 i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l 99 (465)
T TIGR00894 20 LSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPVGYL 99 (465)
T ss_pred HHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcchHHH
Confidence 3444455555666666555555554443110 00112678899999999999999999999999999
Q ss_pred ccccCchhHhHHHHHHHHHHHHHHHhh--cCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHH
Q 013312 75 SDQYGRKAMLTLPLTLSIIPLAILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV 152 (445)
Q Consensus 75 ~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 152 (445)
+||+|||+++..+.++.+++.+++.++ .+ ++.+++.|+++|+ +.+...|....++.|++|+++|++++++...+
T Consensus 100 ~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~~~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 175 (465)
T TIGR00894 100 AGKYVFKWSIGIGMFLSSVISIVIPWAAGGG---IALVVFCRVIQGL-AQGSVSPATHKIIVKWAPPKERSRLLGMSTSG 175 (465)
T ss_pred HHHhCcchhhHHHHHHHHHHHHHHHHHHHcC---chHHHHHHHHHHH-hcccchhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999999999999999999998887554 55 7789999999999 88999999999999999999999999999999
Q ss_pred Hhhhhhhhhhhhhh----h-chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccc
Q 013312 153 LSASFVCGTLAARF----L-STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIP 227 (445)
Q Consensus 153 ~~~g~~~g~~l~~~----~-~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (445)
..+|..++|.+++. . +||+.|++.+++.++..+..+...+|+|+++++.++.+ .+..++. .+++. .
T Consensus 176 ~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~i~~~--~~~~~-----~ 246 (465)
T TIGR00894 176 FQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFE--KKYINSS--LQGQK-----G 246 (465)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHH--HHHHHhh--ccccc-----C
Confidence 99999999888765 2 89999999998877766666566666654332211110 0000000 00000 0
Q ss_pred cccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 228 VCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLA 307 (445)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 307 (445)
+.+.+.++++ ..+++.++...+..+......+.+.+++|.|+++.+|++..+.++..+...++..++. ++.|+++
T Consensus 247 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~-~~~g~l~ 321 (465)
T TIGR00894 247 STRQSLPIKA----IPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCS-IFAGYLA 321 (465)
T ss_pred CCCCCCCHHH----HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0111123333 5677888888888888888888889999999999999999999999999999999988 7889999
Q ss_pred hhhcchhH--------HHHHHHHH--HHHHHHHHh-cCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHH
Q 013312 308 PILGEAKL--------LSLGLFAA--CINMFICSI-SWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGC 375 (445)
Q Consensus 308 ~~~~~~~~--------~~~~~~~~--~~~~~~~~~-~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 375 (445)
||+++|+. +..+.... .+....... ..+.+..... .+.+.+.+...+.......|..| +.+|.+.|+
T Consensus 322 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~ 400 (465)
T TIGR00894 322 DFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGI 400 (465)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHH
Confidence 98764421 11111111 111111222 2223322222 33334444444555555566666 589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCC
Q 013312 376 ISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 432 (445)
Q Consensus 376 ~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (445)
.+..+.+++.++|.+.|.+.+.. +. +.....+.+.++..+++.+......+.
T Consensus 401 ~~~~~~l~~~i~p~l~g~~~~~~-~~----~~~~~~f~~~~~~~~i~~i~~~~~~~~ 452 (465)
T TIGR00894 401 TGLPGFIGGLIASTLAGNILSQD-SK----NVWLIVFLIMAFVNILCVIFYLIFGSA 452 (465)
T ss_pred HHHHHHHHHHHHHHhhheeeCCC-Cc----hHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 99999999999999999887642 00 112234566666666666655544433
No 58
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=9.4e-31 Score=247.41 Aligned_cols=340 Identities=16% Similarity=0.090 Sum_probs=255.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHH
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (445)
+........+..++.+++.|.+|.+.++ ++.+..+.|++.+++.++..++++++|+++||+|||+++..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~--------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 79 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQAD--------LQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLS 79 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHH--------HCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHH
Confidence 3444445666777888889998888643 46677889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh---
Q 013312 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF--- 166 (445)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~--- 166 (445)
+..++.+++.++++ ++.+++.|+++|+ +.+...+...+++.|++|++++++..+.......+|..++|.+++.
T Consensus 80 ~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 155 (401)
T PRK11043 80 LFALGSLGMLWVES---AAQLLVLRFVQAV-GVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN 155 (401)
T ss_pred HHHHHHHHHHHhcC---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 9999999999999 7777777888999999999999999999888888888888887765
Q ss_pred -hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcc
Q 013312 167 -LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (445)
Q Consensus 167 -~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (445)
.+||+.|++.+++.++..+.. +.++|++++++++ +++ ++ .+...++
T Consensus 156 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------------------------~~~---~~-~~~~~~~ 202 (401)
T PRK11043 156 HFGWQAIFATLFAITLLLILPT-LRLKPSKKARKQS----------------------------QDA---LT-FKQLLKS 202 (401)
T ss_pred cCChHHHHHHHHHHHHHHHHHH-HHcCCCCCccccc----------------------------hHH---HH-HHHHHcC
Confidence 599999998887776665544 3455433211110 000 11 2223455
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (445)
|.++...+..............+.|.+.++ .|+++.+.|.......++..++. +..+++.||+++|+..........+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~-~~~~~l~~r~~~~~~~~~~~~~~~~ 280 (401)
T PRK11043 203 KTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGG-YGCRAALQKWGGEQLLPWLLVLFAV 280 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 555544444444445556667788988876 79999999988887778888887 7778999999988866555444443
Q ss_pred HHHH---HHh--cCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 326 NMFI---CSI--SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 326 ~~~~---~~~--~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
+... ... .++.+.... ..+.+++.+..++...+...+..| +++|++.|+.+..+..+...++.+.|.+.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 281 SVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 3322 222 223332222 355677788888888888777776 6899999999999999999999999988763
No 59
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=7.3e-31 Score=244.03 Aligned_cols=367 Identities=14% Similarity=0.098 Sum_probs=268.8
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
+|.++...+..++......+..|+.+.+.+ .+++++..+.+++.+++.+++.+..++.|++.||+|.|+++.+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~-------~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~ 105 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNK-------IGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVF 105 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 367777777778888888888888887754 3568888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh-----cCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhh-
Q 013312 87 PLTLSIIPLAILAYR-----RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG- 160 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~-----~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g- 160 (445)
+.++.++..+..+++ ++ ++.+++.|++.|+ + +..++.....+++++|+++||+++|+.....++|..++
T Consensus 106 ~~ll~~i~~~~~~~a~~~~~~s---~~~lli~r~l~Gi-g-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 106 STAILIIPCVWLGIAVQNPNTP---FGIFIVIALLCGF-A-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHHHHHHHcccCCC---HHHHHHHHHHHHH-H-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 999999999999987 67 9999999999999 6 55778999999999999999999999976666666543
Q ss_pred ---hhhhh------------------hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCC
Q 013312 161 ---TLAAR------------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNE 219 (445)
Q Consensus 161 ---~~l~~------------------~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (445)
|.+.. ..+||...++..++.++..++.++..++.++. +.
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-~~------------------- 240 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS-RA------------------- 240 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-cc-------------------
Confidence 43221 22377777777777666666666655543321 11
Q ss_pred CCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHH
Q 013312 220 SNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQ 299 (445)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 299 (445)
+.++..+ ..|+|..|...+..++....+.++..++|.|.++.+ +............+...+..
T Consensus 241 --------------~~~~~~~-vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~r 303 (462)
T PRK15034 241 --------------SIADQLP-VLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIAR 303 (462)
T ss_pred --------------CHHHHHH-HhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHH
Confidence 2244333 457778888888888888888888889999998855 33333323344456666777
Q ss_pred HHHHHHhhhhhcchhHHHHHHHHHHHHHHHHH-hcC-----CchhHHHH-HHHHhhhhhhhhhHHHHHhcccCC------
Q 013312 300 LLFMPLLAPILGEAKLLSLGLFAACINMFICS-ISW-----SAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGP------ 366 (445)
Q Consensus 300 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~------ 366 (445)
+++|+++||+|+++++..+.+...+....+. ..+ +.+..... +...++.+..+...+.++.+.+|+
T Consensus 304 -plgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~ 382 (462)
T PRK15034 304 -SVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRV 382 (462)
T ss_pred -HhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcc
Confidence 7889999999999999888876666553322 222 12222222 223355555666666666666653
Q ss_pred ---------------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013312 367 ---------------NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 430 (445)
Q Consensus 367 ---------------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (445)
++.|.+.|+....+.+|+++-|.+.|...+..+ .....+....+..+++....+...
T Consensus 383 ~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g-------~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 383 KMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG-------SPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred cccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC-------CcHHHHHHHHHHHHHHHHHHHHHh
Confidence 157899999999999999999999999998873 333345555556666666655443
No 60
>PRK09528 lacY galactoside permease; Reviewed
Probab=100.00 E-value=1.1e-31 Score=255.16 Aligned_cols=380 Identities=11% Similarity=0.042 Sum_probs=257.4
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
++.++.+.+..++..++.+...|.+|.+.++ +++.+..+.|++.+.+.++..+++++.|+++||+|||+++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~ 81 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHD-------INGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLW 81 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 4667777888888999889999999999864 457788899999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHH---hhcCc--chhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhh
Q 013312 87 PLTLSIIPLAILA---YRRSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (445)
Q Consensus 87 ~~~~~~~~~~~~~---~~~~~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (445)
+..+.++...... .++.. ......++.++..|. +.....+....+..+. ++++++.++......++|..++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~ 158 (420)
T PRK09528 82 IISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGF-GFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCA 158 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHH
Confidence 7666555433221 11110 001112333444443 2222233333333222 24567788888888899999999
Q ss_pred hhhhhh---chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHH
Q 013312 162 LAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL 238 (445)
Q Consensus 162 ~l~~~~---~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (445)
.+++.+ +|+++|++.+++.++..+..++..||++++.+.+ + +++ + ++++.+.++.
T Consensus 159 ~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~-~------~~~~~~~~~~ 216 (420)
T PRK09528 159 FIAGILFNINPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA-N--------------ALG-A------NASAVSLKDA 216 (420)
T ss_pred HHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccccchhhhc-c--------------chh-c------ccccccHHHH
Confidence 988875 8999999988777666555544444432211110 0 000 0 0011123333
Q ss_pred HHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhc---CCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhH
Q 013312 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (445)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (445)
.+ ..++|.++...+..+...........+.|.|+.+.+ +.+..+.|.+.+...+...++. +..+++.||+++|+.
T Consensus 217 ~~-~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~ 294 (420)
T PRK09528 217 LA-LLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIM-FFAPFIINRIGAKNA 294 (420)
T ss_pred HH-HccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcchh
Confidence 33 345666655555444444444455556777776543 5666778899998888888887 788999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHH-HHHHHHHHHHHHHHHHHH
Q 013312 316 LSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGC-ISGISSFANIVSPLIFSP 393 (445)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~i~~~~~g~ 393 (445)
+..+..+..++..++.+.++.+.++.. .+.+++.+...+....++.+..|++.+++..+. .++...+|..++|.+.|+
T Consensus 295 ~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~ 374 (420)
T PRK09528 295 LLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGN 374 (420)
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHH
Confidence 988888888888888877777765553 555667766677777888999999999988766 677889999999999999
Q ss_pred HHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHh
Q 013312 394 LTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 428 (445)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (445)
+.|.. ++.. .+...+++.++.....+.
T Consensus 375 l~~~~-------G~~~-~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 375 LYDSI-------GFQG-TYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHhh-------CchH-HHHHHHHHHHHHHHHHHH
Confidence 99986 3333 345444454444444433
No 61
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=3.8e-32 Score=259.70 Aligned_cols=343 Identities=11% Similarity=0.052 Sum_probs=248.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHH-HHHHhhhccc
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA-LRTLTAMVCE 122 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~ 122 (445)
++++.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++ ++.+++ .|++.|+ +.
T Consensus 47 ~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~l~G~-~~ 122 (455)
T TIGR00892 47 QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSN---VIELYLTAGFITGL-GL 122 (455)
T ss_pred HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHh-cc
Confidence 445777788999999999999999999999999999999999999999999999999998 777765 5799999 77
Q ss_pred hhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 013312 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPND 198 (445)
Q Consensus 123 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~ 198 (445)
+...+...+++.++++ ++|+++.++.+.+..+|..++|.+++. .+||+.|++.+++.++..+..++..|+.+.++
T Consensus 123 ~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~ 201 (455)
T TIGR00892 123 AFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQR 201 (455)
T ss_pred hhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 7666677788899986 799999999999999999888887765 49999999999887665554444434322111
Q ss_pred CCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcC
Q 013312 199 DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH 278 (445)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 278 (445)
..+.+.++ ... .+...++.. .....++..+..+ ++ ..++|.++......++..........++|.|.++ .|
T Consensus 202 ~~~~~~~~---~~~-~~~~~~~~~--~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g 272 (455)
T TIGR00892 202 VSKSKSKE---GLP-PDGSTKKLS--KKSTAEKINRFLD-FS-LFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KG 272 (455)
T ss_pred cccccccc---cCC-CCCcccccc--ccchhhhhhhhcc-hH-HhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cC
Confidence 10000000 000 000000000 0000000001111 12 4466777777777777777777778899999987 79
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh--cchhHHH--HHHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhh
Q 013312 279 FNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLLS--LGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFAT 353 (445)
Q Consensus 279 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~ 353 (445)
+++.+.+...+..+++.++++ +..+++.||. ++++... .+.....++.+.....++.+.++. ..+.|++.+...
T Consensus 273 ~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~ 351 (455)
T TIGR00892 273 VDEYEAAFLLSIIGFVDIFAR-PSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVG 351 (455)
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHH
Confidence 999999999999999998888 7778999873 3343332 233333444444455556555444 467788888888
Q ss_pred hhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 013312 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK 401 (445)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~ 401 (445)
+...+.+.|.+|++++++++|+++...++|++++|.+.|.+.|..+++
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~ 399 (455)
T TIGR00892 352 ALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNY 399 (455)
T ss_pred HHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCc
Confidence 999999999999999999999999999999999999999999976333
No 62
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=7.9e-31 Score=246.06 Aligned_cols=329 Identities=14% Similarity=0.161 Sum_probs=246.8
Q ss_pred HHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHh
Q 013312 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY 100 (445)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~ 100 (445)
.++..+..|.+|.+.++ ++.+..+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++...+.+
T Consensus 4 ~~~~~~~~p~~~~~~~~--------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 4 PLAIDMYLPALPVIAAD--------FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL 75 (377)
T ss_pred chHHHHHhccHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH
Confidence 35667888999999754 4667788999999999999999999999999999999999999999999999999
Q ss_pred hcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hchhhHHHHH
Q 013312 101 RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAA 176 (445)
Q Consensus 101 ~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~ 176 (445)
+++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..++|.+++. .+||+.|++.
T Consensus 76 ~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 151 (377)
T PRK11102 76 AQT---IDQLIYMRFLHGL-AAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVL 151 (377)
T ss_pred Hcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 999 8999999999999 8888889999999999999999999999999999999999988765 4899999998
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHH
Q 013312 177 TIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAF 256 (445)
Q Consensus 177 ~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (445)
+.+.++..+...+.+||++++++++ + .+.++..++ .+...++|.++...+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 204 (377)
T PRK11102 152 ALAAILAAALVFFFIPETLPKERRQ-----------------------P---FHLRTTIRN-FASLFRHKRVLGYMLASG 204 (377)
T ss_pred HHHHHHHHHHHHHhCCccCcccccC-----------------------C---CChHHHHHH-HHHHHcChHHHHHHHHHH
Confidence 8887777666666777754322111 0 000011122 222445666665555555
Q ss_pred HHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHH---Hhc
Q 013312 257 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC---SIS 333 (445)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 333 (445)
+..........+.|.+..+.+|+++.+.+.......+..+++. +..+++.||+++|+.+..+..+..+..+.+ ...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMT-IINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL 283 (377)
T ss_pred HHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555556666677888888789999999999999999999988 778999999999998887776544332222 122
Q ss_pred C-CchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHH-HHHHHHHHH
Q 013312 334 W-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS-FANIVSPLI 390 (445)
Q Consensus 334 ~-~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~i~~~~ 390 (445)
+ +.+.... ..+.+.+.+...+.......|..| +++|++.++.+.... ++..+++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 284 DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2333322 233344445555556666777766 889999998877653 444444443
No 63
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=4.4e-31 Score=245.32 Aligned_cols=341 Identities=22% Similarity=0.327 Sum_probs=290.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHH
Q 013312 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (445)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 91 (445)
.+....+...++.....+..|.+.++. +.+..+.+++.+.+.++..+++++.|+++||+|||+.+..+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~ 74 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDL--------GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLF 74 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHH
Confidence 455667788888899999999997653 556678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh----
Q 013312 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (445)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~---- 167 (445)
.++.+...+.++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|++.+++.+....+|..++|.+++.+
T Consensus 75 ~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (352)
T cd06174 75 ALGSLLLAFASS---LWLLLVGRFLLGL-GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL 150 (352)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHc-ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988 9999999999999 88888899999999999999999999999999999999999888764
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchh
Q 013312 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (445)
Q Consensus 168 ~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (445)
+||+.+++.+++.++..+...+ .+ |.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------------------------------------~~ 176 (352)
T cd06174 151 GWRWLFLILAILGLLLALLLLF-LL-----------------------------------------------------RL 176 (352)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HH-----------------------------------------------------HH
Confidence 7999999988877666555433 22 22
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchh-HHHHHHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK-LLSLGLFAACIN 326 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~ 326 (445)
++...+..++..........+.|.+.++.+|.++.+.+.......++..++. +..+++.||+++|+ .+..+..+..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGA-LLGGLLSDRLGRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4445666677777778888999999999779999999999999999999998 77789999999999 999999999998
Q ss_pred HHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 013312 327 MFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 405 (445)
Q Consensus 327 ~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 405 (445)
...+...++.+.... ..+.+++.+...+...++..|..|+++|++.+|+.+...+++..++|.+.|.+.+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~------- 328 (352)
T cd06174 256 LLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG------- 328 (352)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------
Confidence 888888776555544 477789999999999999999999999999999999999999999999999998854
Q ss_pred ccchhHHHHHHHHHHHHHHHHH
Q 013312 406 NFPGFSIMCIGLASMVAFIQSL 427 (445)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~ 427 (445)
++.. .+.+.+++.+++.+..+
T Consensus 329 ~~~~-~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 329 GYGG-VFLILAALALLAALLLL 349 (352)
T ss_pred Ccch-HHHHHHHHHHHHHHHhe
Confidence 2222 35566666666555443
No 64
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=1.9e-30 Score=243.94 Aligned_cols=345 Identities=15% Similarity=0.119 Sum_probs=265.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
.+..+....++..+..++..|.+|.+.+ +++.+..+.|++.+.+.+++.+++++.|++.||+|||+++..+.
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~--------~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~ 75 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQ--------AFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGL 75 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 3456667777888888999999999964 44677789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh---cCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhh
Q 013312 89 TLSIIPLAILAYR---RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (445)
Q Consensus 89 ~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (445)
++.+++.+++..+ ++ ++.+++.|++.|+ +.+...+..+.++.+..|+++|++.+++.+...++|..+||.++.
T Consensus 76 ~l~~~g~~l~~~~~~~~~---~~~~l~~~~l~G~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 76 FLYALGAFLFWPAAEIMN---YTLFLVGLFILTA-GLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred HHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHh-hHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998886554 46 8999999999999 889999999999999999999999999999999999999988765
Q ss_pred hh------------------------------chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhccc
Q 013312 166 FL------------------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGV 215 (445)
Q Consensus 166 ~~------------------------------~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 215 (445)
.+ +||++|++.+++.++..+... ..++++.+++++
T Consensus 152 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~-~~~~p~~~~~~~-------------- 216 (410)
T TIGR00885 152 QLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM-LTKMPALNHSDA-------------- 216 (410)
T ss_pred HHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCcccc--------------
Confidence 43 499999988887665543332 222211111000
Q ss_pred ccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhc-CCchhhHHHHHHHHHHH
Q 013312 216 NQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF-HFNKNQFADLMLIAGLA 294 (445)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~ 294 (445)
+ + . +.++..+...++|.++...+..+++........++++.|.++.. +.+....+...+.....
T Consensus 217 ---------~-~-~----~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~ 281 (410)
T TIGR00885 217 ---------K-Q-I----SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVI 281 (410)
T ss_pred ---------c-c-c----cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 0 0 0 00111122456677777777777777777778889999997632 44444445555555666
Q ss_pred HHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHH
Q 013312 295 GTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 374 (445)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 374 (445)
..+++ ++++++.||+++|+.+.+......+..++....++....+...+.+++.+..+|...+...+..+++.+....+
T Consensus 282 ~~vGR-~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~ 360 (410)
T TIGR00885 282 FFISR-FIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAG 360 (410)
T ss_pred HHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHH
Confidence 77887 88899999999999988888888888877777766555555677889999999999999999998766544555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 375 CISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 375 ~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+.... +|+.+.|.+.|.+.|+.
T Consensus 361 l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 361 LVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHHH--hccchHHHHHHHHHHHh
Confidence 44443 99999999999999964
No 65
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=5.2e-31 Score=248.85 Aligned_cols=350 Identities=13% Similarity=0.052 Sum_probs=249.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHH
Q 013312 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (445)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~ 97 (445)
+.+.++.+.+.+..+.+.++...+ .++...+........+...++..+++++.|+++||+|||+++..+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPP-SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCC-CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 456677777777777776664321 1222222222223344555666789999999999999999999999999999999
Q ss_pred HHhhcCcch-----hHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhh-------
Q 013312 98 LAYRRSISF-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR------- 165 (445)
Q Consensus 98 ~~~~~~~~~-----~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~------- 165 (445)
++++++... .+.+++.|+++|+ +.+...+...+++.|++|+++|++..+..+....+|..+++.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGF-SLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHh-hccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999998321 1258899999999 888888999999999999999999999999999999999887653
Q ss_pred -----hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHH
Q 013312 166 -----FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (445)
Q Consensus 166 -----~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (445)
..+||+.|++.+++.++.. ......||+++.++++++ +++.+.+.++.
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~-- 213 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGL-YLRRNLEETPVFEKAQEK------------------------HKKKRGPIRET-- 213 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHH-HHHHhcCCChhHHHHHhc------------------------cccccCCHHHH--
Confidence 2489999988776655443 333455665432211100 00011122332
Q ss_pred Hhhcc-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 013312 241 LLRSS-VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (445)
Q Consensus 241 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (445)
++++ +.++......++..........+.|.|.++.+|.++.+.+.......+...++. ++.+++.||+++|+.+...
T Consensus 214 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~ 291 (394)
T TIGR00883 214 -LTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITI-PLSGALSDRIGRRPVLIIF 291 (394)
T ss_pred -HHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHH
Confidence 2222 235555556666666677778899999988889999999999999999998888 7789999999999977654
Q ss_pred HHHHHHHH-H-HHHhc--CCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHH-HHHHHHHHHHHHHHHHH
Q 013312 320 LFAACINM-F-ICSIS--WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCI-SGISSFANIVSPLIFSP 393 (445)
Q Consensus 320 ~~~~~~~~-~-~~~~~--~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~i~~~~~g~ 393 (445)
..+..+.. . ..... ++.+.... ..+.+++.+...+...+.+.|.+|+++|+++.++. +....+|..++|.+.|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~ 371 (394)
T TIGR00883 292 TVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAA 371 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHH
Confidence 44333222 2 22222 23343333 35567777788889999999999999999999985 45556888899999999
Q ss_pred HHHhh
Q 013312 394 LTALF 398 (445)
Q Consensus 394 l~~~~ 398 (445)
+.|+.
T Consensus 372 l~~~~ 376 (394)
T TIGR00883 372 LVAMT 376 (394)
T ss_pred HHHHc
Confidence 99986
No 66
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=5e-30 Score=246.69 Aligned_cols=376 Identities=13% Similarity=0.107 Sum_probs=266.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccccc-----Cchh
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKA 82 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~ 82 (445)
|+...++...+.......+..+.+|.+.++. +.+..++|.+ +.....+ ++.+++|+++||+ ||||
T Consensus 12 ~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~--------g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr 81 (491)
T PRK11010 12 PNSAILLILGFASGLPLALTSGTLQAWMTVE--------NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRR 81 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCch
Confidence 3455666667788888899999999998653 4555667775 3334443 5889999999999 9998
Q ss_pred H-hHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhh
Q 013312 83 M-LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (445)
Q Consensus 83 ~-l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (445)
. +..+.+..+++...+++.+..+.++.+.+.+++.|+ +.+...+...+++.|++|+|||+++.++...+..+|.++++
T Consensus 82 ~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~-~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~ 160 (491)
T PRK11010 82 GWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAF-CSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSG 160 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHH
Confidence 6 557777777887777776433338889999999999 77888899999999999999999999999999999999887
Q ss_pred hhhhh-----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhH
Q 013312 162 LAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (445)
Q Consensus 162 ~l~~~-----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (445)
.++.. .|||..|++.+++.++..+.. +..||++++++++ ++..++..++++
T Consensus 161 ~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~-~~~~e~~~~~~~~-----------------------~~~~~~~~~~l~ 216 (491)
T PRK11010 161 GLALWLADRYLGWQGMYWLMAALLIPCIIAT-LLAPEPTDTIPVP-----------------------KTLEQAVVAPLR 216 (491)
T ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCccccccc-----------------------cchhhhHHHHHH
Confidence 65543 589999999988776664444 4467754321110 000000011222
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHH-HHHHHHHHHHHHHHHHhhhhhcchhH
Q 013312 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLML-IAGLAGTISQLLFMPLLAPILGEAKL 315 (445)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (445)
+ +++++..+......++..........+.+.|+.+..|+|+.+.+.... ...++.+++. ++.|++.||+++|+.
T Consensus 217 ~----~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~-ll~G~L~dr~g~~~~ 291 (491)
T PRK11010 217 D----FFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGA-LYGGILMQRLSLFRA 291 (491)
T ss_pred H----HHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHH
Confidence 2 344555555555556666666666778888887778999999999875 4456777777 888999999999887
Q ss_pred HHHHHHHHHHHHHH---HHhcC-CchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHH
Q 013312 316 LSLGLFAACINMFI---CSISW-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 390 (445)
Q Consensus 316 ~~~~~~~~~~~~~~---~~~~~-~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 390 (445)
+..+.++..+..+. +.... +.+.+.. ..+..+..+...+...++..+..+++.+++..|+.+....+|..+++.+
T Consensus 292 l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~ 371 (491)
T PRK11010 292 LMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV 371 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 76665554443322 22322 2222222 2343445555667778888899999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 391 FSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 391 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
.|++.|.. ++.. .|.+.+++.+.+.+.....++
T Consensus 372 ~G~l~~~~-------G~~~-~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 372 AGWFVEAH-------GWPT-FYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHh-------ChHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 99999976 3333 466666777777666665544
No 67
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=100.00 E-value=4.6e-30 Score=242.41 Aligned_cols=373 Identities=13% Similarity=0.107 Sum_probs=263.8
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCc-hhHhHHHHHHH
Q 013312 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAMLTLPLTLS 91 (445)
Q Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~ 91 (445)
+.+..++.+.++++..|.++.+..+ +.+.+..+.|++.+++.++..++++++|+++||+|| |+++.++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~-------~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~ 79 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSK-------TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG 79 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 5667788889999999999999864 346777899999999999999999999999999965 77888888888
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHh--------cCCCccchhhHHHHHHHHHhhhhhhhhhh
Q 013312 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVA--------DNISERQRASAFGILLGVLSASFVCGTLA 163 (445)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (445)
+++..+..+.++ ++.+++.|++.|+ +.+...+...++.. |..+...|.|.+| .+|.++||.+
T Consensus 80 ~~~~~~~~~~~~---~~~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l 149 (418)
T TIGR00889 80 ALLLFFAAQVTT---PAGMFPVLLANSL-AYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWA 149 (418)
T ss_pred HHHHHHHHHhcC---HHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHH
Confidence 888888888888 8999999999998 66666666555432 3333345555555 3577777777
Q ss_pred hhhhch---hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHH
Q 013312 164 ARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (445)
Q Consensus 164 ~~~~~w---~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (445)
++.++. +.+|++.+++.++..+. .+.+||++++++++ + .+. ++ ..+...+
T Consensus 150 ~g~l~~~~~~~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~-~----------------------~~~-~~--~~~~~~~ 202 (418)
T TIGR00889 150 VSLLDIELSNIQLYITAGSSALLGVF-ALTLPDIPVAKSTA-K----------------------MSI-KV--MLGLDAF 202 (418)
T ss_pred HHHhcccchhHHHHHHHHHHHHHHHH-HhcCCCCCCCcccc-c----------------------cCH-HH--HhhhhHH
Confidence 776532 23466666666655543 45678764322111 0 000 00 0000112
Q ss_pred HhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCch--------hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 013312 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK--------NQFADLMLIAGLAGTISQLLFMPLLAPILGE 312 (445)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (445)
..+|+|.++...+..++..........+.|.|.++ .|.++ ...+...+...+..+++. +..+++.||+|+
T Consensus 203 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~-~~~g~l~dr~g~ 280 (418)
T TIGR00889 203 ILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFI-LTIPFFLKRFGI 280 (418)
T ss_pred HHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhCc
Confidence 24567777777777777666666667788888877 45443 566888899999998888 777999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-c---hhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHH-HHHHHHHHH
Q 013312 313 AKLLSLGLFAACINMFICSISWS-A---WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCIS-GISSFANIV 386 (445)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~i 386 (445)
|+++..+.++..++...+....+ . +..+. ..+.+++.+...+....++.|.+|+++||+++|+.+ ....+|..+
T Consensus 281 r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~i 360 (418)
T TIGR00889 281 KKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLL 360 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999988888766665332 2 22222 366677888888888899999999999999999997 567899999
Q ss_pred HHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCC
Q 013312 387 SPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 433 (445)
Q Consensus 387 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (445)
||.+.|++.|+.++... +++.. .|.+.+++.+++.+..+...+++
T Consensus 361 Gp~l~G~l~~~~g~~~~-~~~~~-~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 361 GYILSGVMVEKMFAYGT-FDWQT-MWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHhccccC-CchHH-HHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999998632110 12222 34555555455444444444443
No 68
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-30 Score=237.08 Aligned_cols=373 Identities=17% Similarity=0.173 Sum_probs=276.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHH
Q 013312 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLAL 130 (445)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~ 130 (445)
...+.+.+++.+|.++|+...|.++||+|||..+.++.++..++.+...++...+.+..++++|++.|+ ..|.......
T Consensus 60 ~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl-~~gl~~~~~p 138 (485)
T KOG0569|consen 60 LLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGL-ACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HhHHHHHHHH
Confidence 457889999999999999999999999999999999999888888887776554449999999999999 8899999999
Q ss_pred HHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh------hhhchhhHHHHHHHHHHHHHHHHHHhccCCCCC----CCC
Q 013312 131 AYVADNISERQRASAFGILLGVLSASFVCGTLAA------RFLSTTSAFQAATIVSMLAAAYMRVFLKDDVPN----DDD 200 (445)
Q Consensus 131 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~------~~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~----~~~ 200 (445)
.++.|..|++.||......+.+..+|.++|..++ ..-.|++.+....+++++..+ ...++||+|+. +++
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk~Ll~~k~~ 217 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPKYLLIKKGD 217 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcchHHHHcCC
Confidence 9999999999999999999999999999885554 334799999998888766644 45789999984 344
Q ss_pred cCCccccchhhhcccccCCCCCC------cccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhh-hhHHHHHHHH
Q 013312 201 DDLTRPIITEETEGVNQNESNSP------VKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEG-GMQASFLYFL 273 (445)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 273 (445)
+++++++++..+...+.+++.+. .++..+++..++++.++.-..++.+...+...+...+... ....+....+
T Consensus 218 ~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~ 297 (485)
T KOG0569|consen 218 EEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIF 297 (485)
T ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHH
Confidence 44555555554433221111111 1111112333556644432223333334444444444333 3444555555
Q ss_pred HhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC-----C-chhHHH----HH
Q 013312 274 KAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW-----S-AWVPYA----TT 343 (445)
Q Consensus 274 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~----~~ 343 (445)
++ .|+++.++-+.....+....+.. +++.++.||.|||++++.+..++.+..+++.... . .|..+. .+
T Consensus 298 ~~-aG~~~~~a~~an~~~g~v~~~~t-~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~ 375 (485)
T KOG0569|consen 298 KT-AGFTPEEAQYANLGIGIVNLLST-LVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIF 375 (485)
T ss_pred HH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 55 79999999999999999999998 8889999999999999999998888877665532 1 333322 23
Q ss_pred HHHhhhh-hhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHH
Q 013312 344 AFSVLVV-FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVA 422 (445)
Q Consensus 344 ~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (445)
++.+..+ +..|..+-+.+|.+|++.|..++++....+.+.+++-...+..+.+.++ . ..|+...+.+.+.
T Consensus 376 ~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-------~--~~filF~i~~~~~ 446 (485)
T KOG0569|consen 376 LFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-------P--YVFILFVIPLAIF 446 (485)
T ss_pred HHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------c--hhhHHHHHHHHHH
Confidence 3333333 3578889999999999999999999999999999999999999988762 2 3567777777777
Q ss_pred HHHHHhccCCCCCC
Q 013312 423 FIQSLMMSHTPASS 436 (445)
Q Consensus 423 ~~~~~~~~~~~~~~ 436 (445)
.+..++..||++.+
T Consensus 447 ~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 447 LIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHhCcccCCC
Confidence 78888777777644
No 69
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=1.2e-30 Score=243.79 Aligned_cols=343 Identities=18% Similarity=0.177 Sum_probs=249.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
.++..++..++...+.....|..|.+.+ ++++.+..+.|++.+++.+++.+++++.|+++||+|||+.+..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIK-------DDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSL 74 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHH-------HHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 3456777788888888889999997543 345777788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhc-CcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh-
Q 013312 89 TLSIIPLAILAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (445)
Q Consensus 89 ~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~- 166 (445)
++.+++.+++++++ + ++.+++.|+++|+ +.+.. +...++++|++|+++|++++++.....++|..+++.++..
T Consensus 75 ~~~~i~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 75 LLLAIPCLWAGLAVQS---YSVLLLLRLFIGI-AGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHHHHHHHHhhh---HHHHHHHHHHHHH-hchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999999 8 9999999999999 65544 5678999999999999999999987776666665544422
Q ss_pred -------------hchhhHH-HHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCccccccccc
Q 013312 167 -------------LSTTSAF-QAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (445)
Q Consensus 167 -------------~~w~~~f-~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (445)
.+||+.| ...+++..+..++.....+|++++++++++.+ .+++.. . .++
T Consensus 150 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~---~---~~~ 212 (366)
T TIGR00886 150 IGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLS-----------FKGARW---S---VGT 212 (366)
T ss_pred HHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcc-----------cccccc---c---ccc
Confidence 2799999 44455544444555555666554322110000 000000 0 000
Q ss_pred chhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 013312 233 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE 312 (445)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (445)
+..++..+ ..++|.++...+..++..........+.|.|+++.+|+++.+.+.+.....+..+++. ++.+++.||+++
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~g~ 290 (366)
T TIGR00886 213 GALGDQLK-VFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLAR-PLGGAISDRLGG 290 (366)
T ss_pred hhHHHHHH-HHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHh-hccchHHHhhcc
Confidence 11122222 3455666666666666666667778899999999899999999998888888888888 788999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcC----CchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHH
Q 013312 313 AKLLSLGLFAACINMFICSISW----SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 383 (445)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 383 (445)
|+....+......+...+.+.. +.+.... ..+..++.+...+...+...+..| +++|++.|+.+..+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 291 ARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred chhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 8877777666666555544322 2222222 244455666666777778888776 79999999999988865
No 70
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=3.5e-30 Score=273.79 Aligned_cols=359 Identities=11% Similarity=0.070 Sum_probs=264.6
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
++.+..++...++..++.++....++.+....+ ..+....+....++..+++.+++.+++++.|+++||+|||+++..
T Consensus 10 ~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~ 87 (1140)
T PRK06814 10 SRRFAPLFWTQFFGAFNDNFLKNALVILILYGL--SGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKI 87 (1140)
T ss_pred ccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHH
Confidence 345666777788887776655444333322111 011111233567889999999999999999999999999998643
Q ss_pred ---HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhh
Q 013312 87 ---PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (445)
Q Consensus 87 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (445)
..+...+..+.....++ ++.++++|+++|+ +.+...|+..+++.|++++++|++++++.+++.++|.++||.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~s---~~~l~~~~~l~gi-~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l 163 (1140)
T PRK06814 88 LKFAEIGIAALAIYGFHLNS---VPLLFAALFLMGI-HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTII 163 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHH-HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHH
Confidence 22233333333334477 9999999999999 8899999999999999999999999999999999999999999
Q ss_pred hhhh----chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHH
Q 013312 164 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (445)
Q Consensus 164 ~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (445)
++.+ +|++.|....+..+ ..++..+.+|++++..+..+ ..........+.+
T Consensus 164 ~g~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~ 218 (1140)
T PRK06814 164 GGLATISGNFVILVALLMGIAV-LGWLASLFIPKTGNAAPDLK------------------------IDRNIIRSTITLL 218 (1140)
T ss_pred HHHHHhccccHHHHHHHHHHHH-HHHHHHhhCCCCCCCCCCCe------------------------eccchHHHHHHHH
Confidence 9874 89998855444443 33444466666543221110 0000011223445
Q ss_pred HHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 013312 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (445)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (445)
+..+++|.++...+..++.++.......++|.|+++.+|.++.+.|++.+..+++.+++. +..+++.|+..+++.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~g~l~~~~~~~~~~~~~ 297 (1140)
T PRK06814 219 KYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS-FLASKLSEGRITLLYVPIG 297 (1140)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH-HHHHHHhCCceeeeeehHH
Confidence 567788888888887777777777888899999999999999999999999999999998 7778999887766655555
Q ss_pred HHHHHHHHHHHHhc--------------------CCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHH
Q 013312 320 LFAACINMFICSIS--------------------WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISG 378 (445)
Q Consensus 320 ~~~~~~~~~~~~~~--------------------~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 378 (445)
.++..+..+.+.+. .+.|...+ .+++|++.+...+...+++++.+|++.+|+++|+.++
T Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~ 377 (1140)
T PRK06814 298 ALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNV 377 (1140)
T ss_pred HHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHH
Confidence 55544444433332 34444444 4667888888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 013312 379 ISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 379 ~~~~g~~i~~~~~g~l~~~ 397 (445)
...++..+++.+.|.+.+.
T Consensus 378 ~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 378 LNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998764
No 71
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=1.1e-30 Score=242.88 Aligned_cols=330 Identities=13% Similarity=0.060 Sum_probs=250.7
Q ss_pred HHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhc
Q 013312 23 ATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (445)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~ 102 (445)
......|.+|.+.+| ++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.+...++.+.+ .++
T Consensus 15 ~~~~~~~~lp~l~~~--------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~ 85 (355)
T TIGR00896 15 ALTSVGPLLPQIRSA--------LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP 85 (355)
T ss_pred ccccCcccHHHHHHH--------hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc
Confidence 345667888988754 46777889999999999999999999999999999999999998888888777 677
Q ss_pred CcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh------chhhHHHHH
Q 013312 103 SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL------STTSAFQAA 176 (445)
Q Consensus 103 ~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~------~w~~~f~~~ 176 (445)
+ ++.+++.|++.|+ +.+...+....++.|++| ++|+++++..+...++|..+++.+++.+ +||+.|...
T Consensus 86 ~---~~~l~~~~~~~g~-g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~ 160 (355)
T TIGR00896 86 G---TALLFAGTALIGV-GIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWW 160 (355)
T ss_pred c---HHHHHHHHHHHHH-HHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 7 8889999999999 778777788888899886 6899999999999999998888776542 389888776
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHH
Q 013312 177 TIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAF 256 (445)
Q Consensus 177 ~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (445)
+++.++.. ...+|+.++++++++ . . .....++ ..++|.++...+..+
T Consensus 161 ~~~~~~~~---~~~~~~~~~~~~~~~----------------------~-~---~~~~~~~----~~~~~~~~~~~~~~~ 207 (355)
T TIGR00896 161 ALPALLAL---LAWIPQVRRRVAANQ----------------------T-T---TRLTPVR----IWRSPLAWQVTVFFG 207 (355)
T ss_pred HHHHHHHH---HHHhhhhccccCCCC----------------------C-C---CCCCCch----hhcCHhHHHHHHHHH
Confidence 65543332 233454332111100 0 0 0001122 335566665555556
Q ss_pred HHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-cchhHHHHHHHHHHHHHHHHHhcCC
Q 013312 257 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLSLGLFAACINMFICSISWS 335 (445)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (445)
+..........++|.|+++ .|+++.+.+...+...++.++++ +..+++.||+ ++|+.+..+..+..++.+.+.+.++
T Consensus 208 ~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASA-LLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM 285 (355)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh
Confidence 6666677778899999987 69999999999999999999998 7889999999 4566667777777777666666554
Q ss_pred chhHHHHHHHHhhhhhhhhhHHHHHhcccC-CccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 013312 336 AWVPYATTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK 401 (445)
Q Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~ 401 (445)
.+......+.|++.+...+...+...+..+ ++++++..++.+...+++..++|.+.|++.|+.+++
T Consensus 286 ~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~ 352 (355)
T TIGR00896 286 HGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNW 352 (355)
T ss_pred hHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 333334566788888888887777665544 567799999999999999999999999999988544
No 72
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=4.6e-29 Score=235.56 Aligned_cols=369 Identities=13% Similarity=0.095 Sum_probs=257.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccccc-----Cchh-HhHHH
Q 013312 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKA-MLTLP 87 (445)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~-~l~~~ 87 (445)
+...+...+..+...+.+|.++++. +.+..++|++..+... .+..+++|+++||+ |||| .+..+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~--------g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~ 74 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVE--------GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLT 74 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHH
Confidence 4445667778888899999999753 7777889998777665 68999999999999 8875 68888
Q ss_pred HHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh-
Q 013312 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (445)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~- 166 (445)
.++.+++....++.++...++.+++..++.+. ..+...+...+++.|+.|+|||+++.++...+.++|.++++.++..
T Consensus 75 ~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l 153 (402)
T PRK11902 75 QVGLAASIAAMAFCPPHAALWPLAGLAVLVAF-LSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL 153 (402)
T ss_pred HHHHHHHHHHHHhcCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 88888888888887433337778888888887 7788889999999999999999999999999999999998875544
Q ss_pred ----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHh
Q 013312 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (445)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (445)
.+||..|++.+++.++..+. .+..||+++++++++ + .+++.++.++.+
T Consensus 154 ~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~~~~~~~------------------------~---~~~~~~~~~~~l 205 (402)
T PRK11902 154 ADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPEVPARPPR------------------------S---LGEAVVGPLRDF 205 (402)
T ss_pred HhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCcccccccc------------------------h---hHHHHHHHHHHH
Confidence 48999999988876655443 456676543221110 0 000122334446
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHH-HHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 013312 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGL-AGTISQLLFMPLLAPILGEAKLLSLGLF 321 (445)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (445)
+++|.++..++..++..........+.+.++.+..|+++.+.+++....+. +.+++. +..+++.||+++|+.+..+..
T Consensus 206 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~-~~~g~l~~r~g~~~~l~~~~~ 284 (402)
T PRK11902 206 FSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGA-LAGGTLMVRLGLYRSLMLFGV 284 (402)
T ss_pred HhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHH
Confidence 677877776666666555444444455566767689999999998876655 466666 888999999999988776666
Q ss_pred HHHHHHHHH---HhcC-CchhHHHH-HH----HHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 013312 322 AACINMFIC---SISW-SAWVPYAT-TA----FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (445)
Q Consensus 322 ~~~~~~~~~---~~~~-~~~~~~~~-~~----~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 392 (445)
+..+..+.+ ...+ +.+..... .+ .+++.+...+....++++..|. +..+..+....++..+++.+.|
T Consensus 285 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~G 360 (402)
T PRK11902 285 LQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSA----TQYALLSALASVGRVYVGPTSG 360 (402)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 655443332 3333 33433332 22 2344444555556666666654 4456666667788877777999
Q ss_pred HHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCCC
Q 013312 393 PLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 434 (445)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (445)
.++|+. ++.. .+...+++.+++....++.+++-+
T Consensus 361 ~l~~~~-------G~~~-~f~~~~~~~~~~~~~~~~~~~~~~ 394 (402)
T PRK11902 361 YLVEAY-------GWPG-FYLMTVVIALPGLALLWLMRGTIG 394 (402)
T ss_pred HHHHHh-------ChHH-HHHHHHHHHHHHHHHHHHHhhhcc
Confidence 999987 4443 366666777777776666655533
No 73
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=100.00 E-value=1.3e-29 Score=237.54 Aligned_cols=335 Identities=12% Similarity=-0.007 Sum_probs=251.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCch----hHhHHHHHHH
Q 013312 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK----AMLTLPLTLS 91 (445)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr----~~l~~~~~~~ 91 (445)
..+....+.+++.|.+|.+.+| .+.+..+.|++.+++.++..++++++|+++||+||| +.+.+.....
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~--------~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 83 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKG--------QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF 83 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHh--------cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH
Confidence 3556667889999999999864 366778999999999999999999999999999994 3333222221
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----h
Q 013312 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----L 167 (445)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~ 167 (445)
........++ +|.+++.|++.|+ +.+...|...++..++ +++|+++++......++|..+||.+++. +
T Consensus 84 --~~~~~~~~~~---~~~l~i~~~l~g~-~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~ 155 (382)
T PRK11128 84 --AVAFWFGAHS---FWLLFVAIGLFNL-FFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF 155 (382)
T ss_pred --HHHHHHhccc---HHHHHHHHHHHHH-HHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2223334567 8999999999999 7777788888888876 4567888888888889999999998876 4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchh
Q 013312 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (445)
Q Consensus 168 ~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (445)
+||..|++.++..++..+ ..+..||++++.+++ ++.++..+++ +..+|+|.
T Consensus 156 g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------------------~~~~~~~~~~----~~i~~~~~ 206 (382)
T PRK11128 156 GEQAILWILTAGVASMLL-GQLLRPTIMPQGESR------------------------QQESAGWPAW----KALLKEPT 206 (382)
T ss_pred ChhHHHHHHHHHHHHHHH-HHHccCCCCCccccc------------------------cccccccchH----HHHHcChh
Confidence 999999887765444333 333444432211100 0000001122 33567788
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
++...+..++..........+.|.|.++ .|.++.+.|.+.+...+..++.. +..+++.||+++|+.+..+....+++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIF-AFSNRLFRRWSARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 8877777777777777788888999977 79999999999998888887777 778999999999999999998888888
Q ss_pred HHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHH-HHHHHHHHHHHHHHHHHHHhh
Q 013312 328 FICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCIS-GISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+.+...++.+..+. .++.+++.+...+....+..+. +++++++.++..+ ....+|..+||.+.|.++|+.
T Consensus 285 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 285 GLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77777777776555 4677888888888888888876 5667799999887 445677799999999999986
No 74
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=100.00 E-value=1.7e-29 Score=238.17 Aligned_cols=375 Identities=11% Similarity=0.062 Sum_probs=263.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (445)
|.++.+....++.+.+.....|.+|.+..| +.+.+..+.|++.+++.++..+++++.|+++||+|||+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~ 74 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHD-------VNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWI 74 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 456777778888999999999999999864 3466778899999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHH---hhcCc--chhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhh
Q 013312 88 LTLSIIPLAILA---YRRSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (445)
Q Consensus 88 ~~~~~~~~~~~~---~~~~~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (445)
....+++..... +.+.. ..+....+.|++.|+ +.+...+...++..|..+ ++++.++......++|.++||.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGF-VFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHH
Confidence 776665543322 22210 013445677888888 777777888888777543 3445677888888899999999
Q ss_pred hhhhh---chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHH
Q 013312 163 AARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (445)
Q Consensus 163 l~~~~---~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (445)
+++.+ +||.+|++.+.+.++..+..+...||++++++++ + +.+ .++ ++++.++..
T Consensus 152 ~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~----~~~---~~~~~~~~~ 209 (396)
T TIGR00882 152 IAGILFSIDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVA-N--------------ALG----ANA---SAFSLKLAL 209 (396)
T ss_pred HHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh-c--------------ccc----ccc---CCCCHHHHH
Confidence 88864 8999999988887776655544444432211110 0 000 000 011122322
Q ss_pred HHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhc---CCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHH
Q 013312 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (445)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (445)
...|+|.++...+..+...........+.+.|+++.+ +.+....|...+...+...++. ...+++.||+++|+.+
T Consensus 210 -~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~-~~~g~l~~r~g~~~~l 287 (396)
T TIGR00882 210 -ELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIM-FCAPLIINRIGAKNAL 287 (396)
T ss_pred -HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhH
Confidence 2456666665555555555555556667888887765 4556677888888888888877 7779999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHH-HHHHHHHHHHHHHHHHHHH
Q 013312 317 SLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGC-ISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~i~~~~~g~l 394 (445)
..+..+..+........++.+..+.. .+.+++..........+..+..|++.+++..+. .+....+|+.++|.+.|++
T Consensus 288 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l 367 (396)
T TIGR00882 288 LIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNM 367 (396)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHH
Confidence 98888888877776767676655443 555666555555556677777888888887776 6788999999999999999
Q ss_pred HHhhhcCCCCcccchhHHHHHHHHHHHHHH
Q 013312 395 TALFLSKGAPFNFPGFSIMCIGLASMVAFI 424 (445)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (445)
.|.. ++.. .+.+.+++.++..+
T Consensus 368 ~~~~-------G~~~-~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 368 YDSI-------GFQG-AYLVLGCIVLLFTL 389 (396)
T ss_pred HHhc-------ccHH-HHHHHHHHHHHHHH
Confidence 9986 3333 34555555444443
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2e-29 Score=269.08 Aligned_cols=359 Identities=15% Similarity=0.126 Sum_probs=267.0
Q ss_pred hHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhH
Q 013312 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (445)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (445)
+.+.+..++++.++..++.......+..+..+.. +.+.+....+++.+++.++..++++++|+++||+|||++++
T Consensus 7 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~ 81 (1146)
T PRK08633 7 KIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAY-----DGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIR 81 (1146)
T ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHc-----CcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHH
Confidence 3556666777777766665444444433333321 11233456799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---hhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhh
Q 013312 86 LPLTLSIIPLAILA---YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (445)
Q Consensus 86 ~~~~~~~~~~~~~~---~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (445)
.+.++.++..++.. ..++ ++.+++.|+++|+ +.+...++..+++.|++|+++|++++++.+...++|.++||.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 157 (1146)
T PRK08633 82 IVKLFEVGLTLLIVLAYYLGW---FWLAFAVTFLLGA-QSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTA 157 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHH-HHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHH
Confidence 98877666655444 3466 8999999999999 889999999999999999999999999999999999999999
Q ss_pred hhhhhc-------------hhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccc
Q 013312 163 AARFLS-------------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVC 229 (445)
Q Consensus 163 l~~~~~-------------w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (445)
+++.+. |++.+.+..+...+..++..+.+||.++.....++ +...
T Consensus 158 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~ 215 (1146)
T PRK08633 158 LFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFD----------------------KKKY 215 (1146)
T ss_pred HHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCccccc----------------------cccc
Confidence 887641 23344333333333333444556766543222100 0000
Q ss_pred cccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchh-hHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013312 230 KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN-QFADLMLIAGLAGTISQLLFMPLLAP 308 (445)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~ 308 (445)
......++.++.+++++.++..++..++..........++|.|+++.+|++.. ..+++.+..+++.+++. ++.+++.|
T Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~-~~~g~l~~ 294 (1146)
T PRK08633 216 LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGS-LLAGRLSG 294 (1146)
T ss_pred ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHhC
Confidence 01112233345566777777766666666666667788899999998999998 89999999999999988 78899999
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHH
Q 013312 309 ILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS 387 (445)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~ 387 (445)
|+++++.+.++.++.+++.+.+.+..+.+...+ .++++++.++..+...+++.+..|++.||+++|+.+.+..++..++
T Consensus 295 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~ 374 (1146)
T PRK08633 295 RHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLF 374 (1146)
T ss_pred CceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHH
Confidence 999998888888888877777776666554444 4667888888888899999999999999999999999999999888
Q ss_pred HHHHHHHHH
Q 013312 388 PLIFSPLTA 396 (445)
Q Consensus 388 ~~~~g~l~~ 396 (445)
+.+.+.+..
T Consensus 375 ~~~~~~l~~ 383 (1146)
T PRK08633 375 LALTTLFSG 383 (1146)
T ss_pred HHHHHHHHH
Confidence 877666544
No 76
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=100.00 E-value=6.2e-31 Score=227.94 Aligned_cols=338 Identities=18% Similarity=0.283 Sum_probs=246.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHH
Q 013312 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSIN 126 (445)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~ 126 (445)
+.+....|++.+.+++.+++.++.+|.++||+|||+++++|+...++...+.++++| +..+.++|++.|+ .-|..
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~---F~afv~aR~l~Gi-~kgnl- 138 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN---FAAFVLARFLGGI-FKGNL- 138 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhhhh-ccCch-
Confidence 456788999999999999999999999999999999999999999999999999999 8666667999999 76766
Q ss_pred HHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhhch------hhHHHH----HHHHHHHHHHHHHHhccCCCC
Q 013312 127 CLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLST------TSAFQA----ATIVSMLAAAYMRVFLKDDVP 196 (445)
Q Consensus 127 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~w------~~~f~~----~~~~~~i~~~~~~~~~~e~~~ 196 (445)
....++++|++++|+|+++++.++.++++|.++||.+|+++.. +.+|.. ..++...-.....+++||+-+
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 5799999999999999999999999999999999999998643 222322 222222223334568899866
Q ss_pred CCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcch------hhHHHHHHHHHHHhhhhhhHHHHH
Q 013312 197 NDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSV------TLSQAAVVAFFSGLSEGGMQASFL 270 (445)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 270 (445)
.+++.++.....+..+++ .+..+. ...+....+++.| ......+..+.+...+..+....+
T Consensus 219 ~rk~~~~~~~~~~~~~~~----~~~~~~---------~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~ 285 (451)
T KOG2615|consen 219 LRKRNDEHSTLQEAADDR----LALLKF---------ARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVL 285 (451)
T ss_pred chhhcccccchhhhhhhh----hhhcch---------hhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 555541111111111100 000000 0000011111111 122234444555555555556666
Q ss_pred HHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc--chhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHh
Q 013312 271 YFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSV 347 (445)
Q Consensus 271 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~ 347 (445)
.+..+.+|+++.+.|.+++..++.+.+.+..+ .+..||.+ .+-.+..+..++.-.++++.....+..++.. .+..+
T Consensus 286 ~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~-~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf 364 (451)
T KOG2615|consen 286 FLTHGRFGYSSMQQGKVLSTTGLLMLVIQLAL-VPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSF 364 (451)
T ss_pred HhhcCccCCChhhheeeeehhhHHHHHHHHhc-cccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHH
Confidence 66677899999999999999999999888444 44455554 4556666777777777777777777666664 66788
Q ss_pred hhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 013312 348 LVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 403 (445)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~ 403 (445)
......+....++.+..|+++||+++|+....+.++.++||.+.|.+..+..+.+.
T Consensus 365 ~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~ 420 (451)
T KOG2615|consen 365 STASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQP 420 (451)
T ss_pred HHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCc
Confidence 88888999999999999999999999999999999999999999999887644443
No 77
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=2.3e-30 Score=242.48 Aligned_cols=366 Identities=14% Similarity=0.105 Sum_probs=278.3
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccc
Q 013312 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (445)
Q Consensus 43 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 122 (445)
+++++.+..+.|++.+.++.|+.+++.+.|++.||+|-|+++..+.++.++++++..++.+.+ ++.+++.|+++|+ +.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~-~~~~~~~R~lqGl-~~ 142 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG-FYLLLVLRFLQGL-GQ 142 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc-chhhHHHHHHhHH-HH
Confidence 357888999999999999999999999999999999999999999999999999999987655 5688999999999 99
Q ss_pred hhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh-----hchhhHHHHHHHHHHHHHHHHHHhccCCCCC
Q 013312 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (445)
Q Consensus 123 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~ 197 (445)
|..+|+...+.++|.|++||++..++...+..+|.+++-.+++. +||+++|++.+.++++..++...+..|+|++
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999998887666655 5999999999999988888777777777766
Q ss_pred CCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhc
Q 013312 198 DDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF 277 (445)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (445)
++.-.+. .++..++...++ ...++.+.|+++ +.+++.+|...+..+..+.+...+..+.|.|+++++
T Consensus 223 h~~is~~--El~~I~~~k~~~-------~~~~~~~vP~~~----i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL 289 (466)
T KOG2532|consen 223 HPNISEK--ELKYIEKGKSEA-------HVKKKPPVPYKA----ILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL 289 (466)
T ss_pred CCCCCHH--HHHHHHhccccc-------ccCCCCCCCHHH----HHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh
Confidence 4332110 000000000000 000113346666 678899999999999999999999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc---------hhHHHHHHHHHHHHHHHHHhcCCch--hHHHHHHHH
Q 013312 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---------AKLLSLGLFAACINMFICSISWSAW--VPYATTAFS 346 (445)
Q Consensus 278 g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g 346 (445)
|+|..+.|++.++..+...+.. ++.|.++||+.+ |..-.++....++.++.+++.+... ....+....
T Consensus 290 ~f~v~~~G~~salP~l~~~~~k-~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~ 368 (466)
T KOG2532|consen 290 GFDVRETGFLSALPFLAMAIVK-FVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIA 368 (466)
T ss_pred CCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHH
Confidence 9999999999999999999988 888999998755 2233566666677777777766432 233333333
Q ss_pred hhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHH
Q 013312 347 VLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQS 426 (445)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (445)
.+..+..............+++.+..+|+.+....+.++++|.+.|.+... + ....|.. .|++.+++.+++.+..
T Consensus 369 ~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~--~--t~~eW~~-VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 369 IGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTD--N--TREEWRI-VFLIAAGILIVGNIIF 443 (466)
T ss_pred HHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC--C--CHHHHHH-HHHHHHHHHHHhchhe
Confidence 333333333333322222458899999999999999999999999998841 1 1112333 4677777777666555
Q ss_pred Hhc
Q 013312 427 LMM 429 (445)
Q Consensus 427 ~~~ 429 (445)
...
T Consensus 444 ~~f 446 (466)
T KOG2532|consen 444 LFF 446 (466)
T ss_pred eEe
Confidence 444
No 78
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4.3e-31 Score=235.54 Aligned_cols=366 Identities=14% Similarity=0.167 Sum_probs=262.8
Q ss_pred hhhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhH
Q 013312 4 EKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAM 83 (445)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~ 83 (445)
++..+.+.++++...+...+.+.+..+.+... +.++++....|++++.+.+.+.+++|+.|+++||++||++
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~--------~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v 100 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQ--------TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRV 100 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHH--------HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceE
Confidence 33456678888899999999988887777765 4457777888999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhh
Q 013312 84 LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (445)
Q Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 163 (445)
+.+|..++.++.++++++.. +|++.++|.+.|+ |.+.+.|..+++++|.+|+++|++++++++....+|..+|.+.
T Consensus 101 ~~vG~~iW~~Av~~~~fs~~---Fwq~~l~R~~vGi-GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vv 176 (493)
T KOG1330|consen 101 IAVGIFIWTLAVFASGFSNH---FWQVLLCRGFVGI-GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVV 176 (493)
T ss_pred EeeHHHHHHHHHHHHHHHHH---HHHHHHHHHHhcc-chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEe
Confidence 99999999999999999988 9999999999999 9999999999999999999999999999999999998888777
Q ss_pred hhhh-----chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHH
Q 013312 164 ARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL 238 (445)
Q Consensus 164 ~~~~-----~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (445)
+... .|||.|+..+++++++.++..++.+|+++...++.+. + .+........+++.
T Consensus 177 gs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~---------------~----~~~~~~~ts~~kDl 237 (493)
T KOG1330|consen 177 GSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDG---------------E----NKMVKPFTSVWKDL 237 (493)
T ss_pred eeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccccccccc---------------C----CcCCCCccchHHHH
Confidence 6653 4999999999999999999988888877643332110 0 00011222344553
Q ss_pred HHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHh---hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcch--
Q 013312 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKA---QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA-- 313 (445)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 313 (445)
+.+.+++.+....+......+..+++.-+.|.+... ..|++....-++..+...++.+|. +.+|.++||+.++
T Consensus 238 -~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGv-l~Ggiisd~~~~~~~ 315 (493)
T KOG1330|consen 238 -KVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGV-LFGGIISDKLSRIFP 315 (493)
T ss_pred -HHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhh-eehHHHHHHHHHhcc
Confidence 334455555555555666666666665566654433 335565565556667777777777 7788888884321
Q ss_pred --hHHHHHHHHH-------HHHHHHHHhcC--CchhHHHHHHHHhhhhhhh-hhHHHHHhcccCCccchhHHHHHHHHHH
Q 013312 314 --KLLSLGLFAA-------CINMFICSISW--SAWVPYATTAFSVLVVFAT-PSFRSIVSKQVGPNEQGKAQGCISGISS 381 (445)
Q Consensus 314 --~~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 381 (445)
....+..+.. +..+.+..... +.+..+..+++|....... ....-+..+.+|+++|.++.++...+..
T Consensus 316 ~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h 395 (493)
T KOG1330|consen 316 NSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEH 395 (493)
T ss_pred cccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHH
Confidence 1112111111 11111111122 2222333344444443333 3444567889999999999999988886
Q ss_pred H-HHHHHHHHHHHHHHhhhcCC
Q 013312 382 F-ANIVSPLIFSPLTALFLSKG 402 (445)
Q Consensus 382 ~-g~~i~~~~~g~l~~~~~~~~ 402 (445)
+ |.+-+|.+.|.+.|+..+++
T Consensus 396 ~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 396 IFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HhccCCCcceehhHHHHhhCCC
Confidence 5 55556669999999986655
No 79
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=6.2e-29 Score=231.19 Aligned_cols=318 Identities=15% Similarity=0.066 Sum_probs=237.4
Q ss_pred HHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccccc-----CchhHh-HHHHHHHHHHHHH
Q 013312 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKAML-TLPLTLSIIPLAI 97 (445)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~l-~~~~~~~~~~~~~ 97 (445)
..+..+.+|.+.+| .+++..+.|+..+. .+...+ .+++|+++||+ ||||.+ +.+.+..++....
T Consensus 4 ~~~~~~~~~~~~~~--------~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~ 73 (356)
T TIGR00901 4 LGLVGNTLPYWLRS--------KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLI 73 (356)
T ss_pred chhHHhHHHHHHHH--------cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 35667788888754 36777888888655 555555 89999999998 898874 6777888888777
Q ss_pred HHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hc-----
Q 013312 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LS----- 168 (445)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~----- 168 (445)
.++.++....+.+....++.+. +.+...++..+++.|++|+|+|+++.++...+..+|.++++.+++. .+
T Consensus 74 l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~ 152 (356)
T TIGR00901 74 LSFLVPSTDLPLLAGLAFLIAF-FSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGL 152 (356)
T ss_pred HHcCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 7777543337777888888888 7788889999999999999999999999999999999999988864 46
Q ss_pred ---hhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcc
Q 013312 169 ---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (445)
Q Consensus 169 ---w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (445)
||..|++.++..++..+..++..||++++++++ +++.++.++.++.++++
T Consensus 153 ~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~ 205 (356)
T TIGR00901 153 ITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVP---------------------------KPLTQAVLKPIREFFQR 205 (356)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccc---------------------------hhHHHHHHHHHHHHHHh
Confidence 999999999877665555444556643211100 00001122233334455
Q ss_pred hh---hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHH-HHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 013312 246 VT---LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGL-AGTISQLLFMPLLAPILGEAKLLSLGLF 321 (445)
Q Consensus 246 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (445)
|. ++...+..++..........+.|.|+++ .|+++.+.+......+. ..+++. ++.+++.||+|+|+.+..+.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~~~ 283 (356)
T TIGR00901 206 KNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGG-LIGGIIMQPLNILYALLLFGI 283 (356)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHH
Confidence 54 6656666666777777888999999988 89999999988887774 455665 888999999999998888888
Q ss_pred HHHHHHHHHHhc-----------CCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHH
Q 013312 322 AACINMFICSIS-----------WSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS 381 (445)
Q Consensus 322 ~~~~~~~~~~~~-----------~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 381 (445)
+..+....+.+. ++.+..... ++.+++.+...+...++.+|.+|+++||+.+|+.+...+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 284 VQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 777766654432 222333333 556888899999999999999999999999999887765
No 80
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.97 E-value=2e-28 Score=234.49 Aligned_cols=344 Identities=14% Similarity=0.105 Sum_probs=256.3
Q ss_pred HHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccc----cCchh-HhHHHHHHHH
Q 013312 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKA-MLTLPLTLSI 92 (445)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~ 92 (445)
+...+..++..+.++.+.. ++++++..+.|++.++..+..++..|+.|+++|| +|||| .++.+....+
T Consensus 9 ~~~~~~~~~~~~~l~~~~~-------~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~ 81 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYT-------DVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFS 81 (437)
T ss_pred HHHHHHHHHHHHHHHHHHH-------HccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHH
Confidence 3344555666666777765 4557888999999999999999999999999997 67755 5667888888
Q ss_pred HHHHHHHhhcCcc---hhHHHHHHHHHhhhccchhHHHHHHHHHhcCC-CccchhhHHHHHHHHHhhhhhhhhhhhh---
Q 013312 93 IPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLAAR--- 165 (445)
Q Consensus 93 ~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~--- 165 (445)
++.+++.+.++.+ ....+++.+++.++ +.+...+...++..|.. +++||++..++.+....+|..+++.+.+
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~ 160 (437)
T TIGR00792 82 IVLVLLFTTPDFSATGKLVYAYITYILLGL-FYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLV 160 (437)
T ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887776532 14567778888888 66776677788889987 4689999999988888787655433321
Q ss_pred --------hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHH
Q 013312 166 --------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (445)
Q Consensus 166 --------~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (445)
..+||+.+.+.+++.++..+...+..||++++.+++ ++++.+.++
T Consensus 161 ~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~---------------------------~~~~~~~~~ 213 (437)
T TIGR00792 161 SYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN---------------------------IEKKLSLKQ 213 (437)
T ss_pred HHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc---------------------------cccCCCHHH
Confidence 247999999998888777766666777754211110 001113455
Q ss_pred HHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHH
Q 013312 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (445)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (445)
.++.++++|.++...+..++..........+.+.|.++.++ ++.+.+.+.....+..+++. ++.+++.||+|+|+.+.
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g~~~~~~ 291 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGV-LLFPRLVKKFGRKILFA 291 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHH
Confidence 56667788888877777777777766666666777766555 55666777777788888887 77799999999999999
Q ss_pred HHHHHHHHHHHHHHhcC-CchhHHH-HHHHHhhhhhhhhhHHHHHhcccC-------CccchhHHHHHHHHHHHHHHHHH
Q 013312 318 LGLFAACINMFICSISW-SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFANIVSP 388 (445)
Q Consensus 318 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~i~~ 388 (445)
.+..+..++.+.+.+.+ +.+.... ..+.+++.+...+..+++.+|..| ++.+|++.|+.+....+|..+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~ 371 (437)
T TIGR00792 292 GGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAG 371 (437)
T ss_pred HHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHH
Confidence 99888888777666643 3333333 356678888888888999888765 45679999999999999999999
Q ss_pred HHHHHHHHhh
Q 013312 389 LIFSPLTALF 398 (445)
Q Consensus 389 ~~~g~l~~~~ 398 (445)
.+.|.+.+..
T Consensus 372 ~i~g~ll~~~ 381 (437)
T TIGR00792 372 FLVGLILGII 381 (437)
T ss_pred HHHHHHHHHc
Confidence 9999999976
No 81
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=9.7e-28 Score=229.68 Aligned_cols=380 Identities=10% Similarity=-0.019 Sum_probs=264.3
Q ss_pred hhhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccc-cCchh
Q 013312 4 EKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKA 82 (445)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~ 82 (445)
.++++.++.+++..+...++.+...+.+|.|+++. .+++.+..+.|++.+.+.++..++++++|+++|| +|||+
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~-----~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~ 80 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQ-----AGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKK 80 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHH
Confidence 34567788889999999999999999999998642 2367778899999999999999999999999999 89999
Q ss_pred HhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccc---hhhHHHHHHHHHhhhhhh
Q 013312 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ---RASAFGILLGVLSASFVC 159 (445)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~ 159 (445)
++.++.++.+++.++.+++++ ++.+++.|.+.|+ +.|...|...++++|++|+++ |++++++++...++|..+
T Consensus 81 ~l~~~~~~~~~g~~~~~~~~~---~~~~~~~~~l~g~-g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~i 156 (475)
T TIGR00924 81 TMVLGGIVLMLGHFMLAMSIY---PDLIFYGLGTIAV-GSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFI 156 (475)
T ss_pred HHHHHHHHHHHHHHHHHhccc---HhHHHHHHHHHHh-ccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHH
Confidence 999999999999999999888 8888899999999 888888999999999998754 888999999999999999
Q ss_pred hhhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcC-Ccc-ccchhhhc-------------c--cccC
Q 013312 160 GTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD-LTR-PIITEETE-------------G--VNQN 218 (445)
Q Consensus 160 g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~-~~~-~~~~~~~~-------------~--~~~~ 218 (445)
||.+++. .+|++.|.+.++..++..+. +...++..++.++++ +.+ +..+.... . ...+
T Consensus 157 g~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (475)
T TIGR00924 157 SPLLAGVIAENYGYHVGFNLAAVGMVIGLLT-FFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHH 235 (475)
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHH-HHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998876 48999999888655444333 333332221111100 000 00000000 0 0000
Q ss_pred CCCCCc-------------ccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhh--
Q 013312 219 ESNSPV-------------KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ-- 283 (445)
Q Consensus 219 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-- 283 (445)
....+. .+...++.....+ ..|.+.+..+++...+....+....+.++.+.++..+.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ 311 (475)
T TIGR00924 236 VVIANILLMTVTLAVIIFFFRLAFKPRLDAVA----RNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMS 311 (475)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH----HhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceE
Confidence 000000 0000000000000 011123444455555666666667777888887754444222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHH---Hhhhh-hcchhHH--HHHHHHHHHHHHHHHh---------cCCchhHHH-HHHH
Q 013312 284 --FADLMLIAGLAGTISQLLFMP---LLAPI-LGEAKLL--SLGLFAACINMFICSI---------SWSAWVPYA-TTAF 345 (445)
Q Consensus 284 --~g~~~~~~~~~~~~~~~~~~~---~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~ 345 (445)
.+++.+..++..++.+.++.. ++.|| .+++... .+|+++.++++..+.+ ..+.|..+. ..+.
T Consensus 312 ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~ 391 (475)
T TIGR00924 312 VPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQ 391 (475)
T ss_pred ECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHH
Confidence 678888888888888744332 33333 2223333 6778888878777664 234454444 4788
Q ss_pred HhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 346 SVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
+++.....|..++++.+..|++.||+.+|+......+|..+++.+.+...+.
T Consensus 392 ~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~ 443 (475)
T TIGR00924 392 TLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP 443 (475)
T ss_pred HHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999988887766543
No 82
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.1e-27 Score=207.93 Aligned_cols=348 Identities=16% Similarity=0.136 Sum_probs=282.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
.+..+....++..+......+.+|.+. +.++++..+.++++.+++.++.+.+++.|++.+|+|+|+-++.++
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~--------~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL 85 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLK--------EVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGL 85 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHH--------HHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHH
Confidence 344445555667777888889999886 445888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh-
Q 013312 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~- 167 (445)
.++++++.+..-+.+...+..++++-++.|. |.+...++++.+++...|+++..+.+++.+..+++|.++||.+++.+
T Consensus 86 ~l~avg~~lF~pAa~~~~y~~FL~~lFila~-Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 86 LLYAVGAALFWPAASSKSYGFFLVALFILAS-GIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHh-hhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 9999999999755444448999999999999 99999999999999999999899999999999999999999988763
Q ss_pred ----------------------chhhHHHHHHHHHHHHHHHHH-HhccCCCCCCCCcCCccccchhhhcccccCCCCCCc
Q 013312 168 ----------------------STTSAFQAATIVSMLAAAYMR-VFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPV 224 (445)
Q Consensus 168 ----------------------~w~~~f~~~~~~~~i~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (445)
.||++|...+....+..+... ...|+.++..+++
T Consensus 165 ls~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~----------------------- 221 (422)
T COG0738 165 LSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSL----------------------- 221 (422)
T ss_pred HhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccc-----------------------
Confidence 256777777665444333321 1222222111110
Q ss_pred ccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 013312 225 KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMP 304 (445)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 304 (445)
.+++ +. .....+++|.++...+..+++-.......++++.|+.+..|.+..+.+...+....+.++|+ +++.
T Consensus 222 ---~~~~-~~---~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGR-Fig~ 293 (422)
T COG0738 222 ---GASG-SA---GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGR-FIGS 293 (422)
T ss_pred ---cccc-cc---hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 0000 00 22336678888888999999999999999999999999789999999999999999999999 7778
Q ss_pred HhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHH
Q 013312 305 LLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN 384 (445)
Q Consensus 305 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 384 (445)
++.+|++..+.+.....+..+.++...+.++.+.++...+.|++.+..+|...+...+..| + ..+..|..-.+..+|+
T Consensus 294 ~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~-~ts~~s~~l~maivGG 371 (422)
T COG0738 294 ALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-E-HTSVGSGLLVMAIVGG 371 (422)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-c-cccccceeeeeheecc
Confidence 8888999999988888877777788888888888888899999999999999999999998 3 3445555667788899
Q ss_pred HHHHHHHHHHHHhh
Q 013312 385 IVSPLIFSPLTALF 398 (445)
Q Consensus 385 ~i~~~~~g~l~~~~ 398 (445)
++.|.+.|++.|..
T Consensus 372 AiiP~l~G~i~d~~ 385 (422)
T COG0738 372 AIIPPLQGVIADMF 385 (422)
T ss_pred hHHHHHHHHHHHhh
Confidence 99999999999987
No 83
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=9.1e-30 Score=222.08 Aligned_cols=352 Identities=18% Similarity=0.166 Sum_probs=272.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcC------------------------------------------CCCcchh
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALC------------------------------------------PGLDECS 47 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~ 47 (445)
+..+.++.+++.+-...+.|.+|.|.+|.-+ .+..+.+
T Consensus 23 lviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~ 102 (464)
T KOG3764|consen 23 LVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLD 102 (464)
T ss_pred EEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCcc
Confidence 4456677788888889999999999988431 0013345
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHH
Q 013312 48 LAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINC 127 (445)
Q Consensus 48 ~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~ 127 (445)
....++|++.+...+.+.+.+|+.|.+.||+|+|..++++++....+++++++.++ ++.++++|.+||+ +.+..+.
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s---y~~l~vAR~LQgv-gsA~~~t 178 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS---YPMLFVARSLQGV-GSAFADT 178 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch---hHHHHHHHHHhhh-hHHHHHh
Confidence 56688999999999999999999999999999999999999999999999999999 9999999999999 9999999
Q ss_pred HHHHHHhcCCCcc-chhhHHHHHHHHHhhhhhhhhhhhhhh----chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcC
Q 013312 128 LALAYVADNISER-QRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD 202 (445)
Q Consensus 128 ~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~ 202 (445)
+..++++|.+|++ ||++++|+...+.++|.++||..|+.+ |.+.+|++.+++.++...+..+.+++++.+++..
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~- 257 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST- 257 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc-
Confidence 9999999999975 589999999999999999999999984 8999999999999888877766666544333211
Q ss_pred CccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchh
Q 013312 203 LTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN 282 (445)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 282 (445)
.+..++++ +.++|.++.........+.........++.+..|.+.-+..
T Consensus 258 ---------------------------~~~~~~~~----Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w 306 (464)
T KOG3764|consen 258 ---------------------------EQGTPMWS----LLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGW 306 (464)
T ss_pred ---------------------------ccCccHHH----HHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCc
Confidence 11123333 45677777666666666667777788888988888885555
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcchh--HHHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHH
Q 013312 283 QFADLMLIAGLAGTISQLLFMPLLAPILGEAK--LLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSI 359 (445)
Q Consensus 283 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~ 359 (445)
+.|..+....+...++. .+.+.+.||+++.+ ....+.+...++.....+.++...+++ ....+++.+.......-.
T Consensus 307 ~~G~~fLp~~~~y~ig~-~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~ 385 (464)
T KOG3764|consen 307 EVGLAFLPASLSYAIGT-NLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPT 385 (464)
T ss_pred ceeeeecccccchhccC-chHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 88999999999999998 77789999999433 344455555555555566665544333 233344444433333322
Q ss_pred H---hcccCCc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 360 V---SKQVGPN---EQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 360 ~---~~~~~~~---~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
. .|....+ ..|.+.++......+|.++||.++|.+++..
T Consensus 386 l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i 430 (464)
T KOG3764|consen 386 LGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI 430 (464)
T ss_pred hHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh
Confidence 2 2222223 6789999999999999999999999999887
No 84
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.97 E-value=5.1e-26 Score=214.11 Aligned_cols=367 Identities=13% Similarity=0.102 Sum_probs=251.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHH--HHHHHHHHHHhhhhccc-cccccCchhHhHH
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQ--QAIIGLGTLVMMPVIGN-LSDQYGRKAMLTL 86 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~l~~~~~~~~~G~-l~Dr~Grr~~l~~ 86 (445)
+..+....+...+..++..|.+|.+.+|. +.+..++|++ .+...+...+.+|++++ .+||+||||.+++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~--------g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~ 74 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRED--------GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVL 74 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHH
Confidence 34455666778888899999999999753 5666888997 46778889899999955 7999999999766
Q ss_pred HHHH-HHHHHHHHH-hhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh
Q 013312 87 PLTL-SIIPLAILA-YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (445)
Q Consensus 87 ~~~~-~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (445)
...+ .+......+ +........+++..-++.++ ..+...+..+++..|..++++++...+....+..+|.++|+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~ 153 (390)
T TIGR02718 75 PMQCLVSACLASLALVGPDVAGAGWAVGLLACASL-ASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGT 153 (390)
T ss_pred HHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5533 232222222 21111113344455555666 66778888999999999988888888888888888988888544
Q ss_pred h----hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHH
Q 013312 165 R----FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (445)
Q Consensus 165 ~----~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (445)
+ .++||.+|++.+++.++..+...+ .+|++++++++ +.+ ..++..
T Consensus 154 ~~l~~~~gw~~~f~~~a~l~~~~~~~~~~-~~~~~~~~~~~--------------------------~~~---~~~~~~- 202 (390)
T TIGR02718 154 LVLFGKFGQRPAFLLVACVPLASLVCVLW-LKDRAVASPEA--------------------------PLA---RRASLF- 202 (390)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHH-cCCCCcCcccc--------------------------chh---hHHHHH-
Confidence 3 469999999999887766555534 44332211110 000 112222
Q ss_pred HhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHH
Q 013312 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (445)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (445)
...|+|.++......++..........+.+.|++| .|+++++.|.+....+....+.+.+..|++.||+++|+.+..+.
T Consensus 203 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 203 RFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 24566767777777777777777888899999988 69999999999888876554443378899999999999888777
Q ss_pred HHHHHHHHHHHh-c-----CCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCC-ccchhHHHHHHHHHHHHHHHHHHHHH
Q 013312 321 FAACINMFICSI-S-----WSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGP-NEQGKAQGCISGISSFANIVSPLIFS 392 (445)
Q Consensus 321 ~~~~~~~~~~~~-~-----~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~~~~~g 392 (445)
.+..+..+.... . ++.+..... .+.++..+...+...+...+..++ +.+|+.++..+...++|..++|.+.|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G 361 (390)
T TIGR02718 282 GLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAG 361 (390)
T ss_pred HHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655333222211 1 111222222 333455677777788887777766 88999999999999999999999999
Q ss_pred HHHHhhhcCCCCcccchhHHHHHHHHHHHHHHH
Q 013312 393 PLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQ 425 (445)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (445)
.++|+. ++.. .+...+++.+++...
T Consensus 362 ~l~~~~-------G~~~-~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 362 YLTDRF-------GYAG-GFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHH-------ccHH-HHHHHHHHHHHHHHH
Confidence 999986 3322 355555555555443
No 85
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=5.6e-27 Score=224.40 Aligned_cols=374 Identities=10% Similarity=0.059 Sum_probs=250.7
Q ss_pred CcchhhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccc-cC
Q 013312 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YG 79 (445)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~G 79 (445)
|++++.+|.++.++...+...++++...+.++.|+++. ++.+....+++.+.+.....+..++.|+++|| +|
T Consensus 7 ~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~-------lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G 79 (489)
T PRK10207 7 MGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQ-------LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLG 79 (489)
T ss_pred cchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccc
Confidence 44445567788888888999999999999999998753 45555667888888998888889999999999 99
Q ss_pred chhHhHHHHHHHHHHHHHHHhhcCcchhHH-HHHHHHHhhhccchhHHHHHHHHHhcCCCcc--chhhHHHHHHHHHhhh
Q 013312 80 RKAMLTLPLTLSIIPLAILAYRRSISFFYA-YYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSAS 156 (445)
Q Consensus 80 rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g 156 (445)
|||+++.+.++++++.+.++++++ ... ++++|.++|+ +.|...|...+++.|.+|++ +|+++++++....++|
T Consensus 80 ~r~~~~~g~~~~~~g~~~~~~~~~---~~~ll~~~~~l~~i-g~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig 155 (489)
T PRK10207 80 TKRTIVLGAIVLAIGYFMTGMSLL---KPDLIFIALGTIAV-GNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIG 155 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcc---chhHHHHHHHHHHh-ccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHH
Confidence 999999999999999999999876 343 5589999999 88988899999999999876 4577899999999999
Q ss_pred hhhhhhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCC-----CcCCccccchhh---------hcccccC
Q 013312 157 FVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD-----DDDLTRPIITEE---------TEGVNQN 218 (445)
Q Consensus 157 ~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~-----~~~~~~~~~~~~---------~~~~~~~ 218 (445)
..+||.+++. +|||+.|++.++ .++..++.+...++..++.+ ++.|.++..... .....+.
T Consensus 156 ~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~ 234 (489)
T PRK10207 156 SLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHN 234 (489)
T ss_pred HHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9888877765 599999998754 33333333333443221111 111111110000 0000000
Q ss_pred CCCCCcc------------cccccccchhHHHHHHhhcchhhHHHH--HHHHHHHhhhhhhHHHHHHHHHhhcCCchh--
Q 013312 219 ESNSPVK------------IPVCKKIPSIRDLICLLRSSVTLSQAA--VVAFFSGLSEGGMQASFLYFLKAQFHFNKN-- 282 (445)
Q Consensus 219 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-- 282 (445)
....... -.++++.+ ...|+|.+.... +...+....+......++.|.++..+.+..
T Consensus 235 ~~~~~~~~~~~~~i~~~~f~~~~~~~~-------~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~ 307 (489)
T PRK10207 235 VEVANLVLIVLSIVVTIIFFREAFKLD-------KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGF 307 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccce
Confidence 0000000 00000000 122333333222 223344445555557778888753333211
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHhhhhhcchh-------HHHHHHHHHHHHHHHHH-----hc-----CCchhHHH-H
Q 013312 283 --QFADLMLIAGLAGTISQLLFMPLLAPILGEAK-------LLSLGLFAACINMFICS-----IS-----WSAWVPYA-T 342 (445)
Q Consensus 283 --~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~-~ 342 (445)
..+.+.+...+..++.. .+.+++.||.++|+ -+..|+++.+++++.+. .. .+.|.... .
T Consensus 308 ~i~~~~~~~~n~~~iii~~-pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~ 386 (489)
T PRK10207 308 SINPVSFQALNPFWVVVAS-PILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVY 386 (489)
T ss_pred EECHHHHHhHhHHHHHHHH-HHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHH
Confidence 22445555656666666 55679999999886 36677777776664331 21 12333333 4
Q ss_pred HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 343 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 394 (445)
.+.+++.....|...+.+.+..|++.+|.++|+.+...++|+.++..+....
T Consensus 387 ~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 387 LFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7779999999999999999999999999999999999999999988777654
No 86
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.96 E-value=9e-26 Score=209.35 Aligned_cols=373 Identities=19% Similarity=0.229 Sum_probs=271.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccC-chhHhHHHHHHH
Q 013312 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-RKAMLTLPLTLS 91 (445)
Q Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-rr~~l~~~~~~~ 91 (445)
+....++.++..+...|.+|.++++ .+.+..++|.+.+...+...+.++++|.++||.+ +||.+.+..++.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~--------~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~ 78 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES--------RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLS 78 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHH
Confidence 4556677888889999999999864 3677789999999999999999999999999986 578888888888
Q ss_pred HHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhh-----hhhh
Q 013312 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL-----AARF 166 (445)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~-----l~~~ 166 (445)
++........++ ++.+++.-++..+ ......|...++..+..+ ++++-.|......++|.+++.. +.+.
T Consensus 79 ~~~~~~~~~~~~---f~~~~~~~~l~~~-~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~ 152 (400)
T PF03825_consen 79 ALALLLLAFSSS---FWWLFVIMLLFSF-FFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGY 152 (400)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHH-HHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhh
Confidence 887777777888 8888888887777 566677888888888776 3344566666667777666633 2233
Q ss_pred hch---hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhh
Q 013312 167 LST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (445)
Q Consensus 167 ~~w---~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (445)
.++ ...+++.+...++.... .+.+|+.|++++.++ ..++...++.++ +.
T Consensus 153 ~~~~~~~~~~~i~~~~~~ll~~~-~l~lp~~~~~~~~~~--------------------------~~~~~~~~~~~~-ll 204 (400)
T PF03825_consen 153 LGISGTSLIFYIAAILSLLLAGF-ALFLPKTPPKRSAKE--------------------------SVKKLLGLDALK-LL 204 (400)
T ss_pred hccccccHHHHHHHHHHHHHHHH-HHhCCCCccccccCC--------------------------CcccccchHHHH-Hh
Confidence 222 34566666554443332 356787663222210 001112233333 45
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (445)
|+|++...++..++.+.....++.+.+.|+++.-|.+....+...+...+..++.- ...+++.+|+|.++++.++....
T Consensus 205 k~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f-~~~~~~~~r~g~~~ll~~a~~~~ 283 (400)
T PF03825_consen 205 KNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFF-FFSGRFLKRFGIKWLLLLALVAY 283 (400)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHH
Confidence 66777777888888888899999999999999544777888888887777777765 88899999999999999999999
Q ss_pred HHHHHHHHhc-CCchhHHHH-----HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 013312 324 CINMFICSIS-WSAWVPYAT-----TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS-SFANIVSPLIFSPLTA 396 (445)
Q Consensus 324 ~~~~~~~~~~-~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~i~~~~~g~l~~ 396 (445)
++-..+++.. ++.+..... .+.|+..+..+.....++.+.+|++.|++++++++... .+|..+|..++|+++|
T Consensus 284 ~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~ 363 (400)
T PF03825_consen 284 AVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYD 363 (400)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999998887 444433322 34789999999999999999999999999999988875 7999999999999999
Q ss_pred hhhcCCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013312 397 LFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 430 (445)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (445)
+. +.+..+.+... +.+.+++.++..+......
T Consensus 364 ~~-g~~~~~~~~~~-~~v~a~~~~~~~~~f~~~f 395 (400)
T PF03825_consen 364 AF-GARGMFDWSAV-FLVFAVMALVILVLFVILF 395 (400)
T ss_pred Hh-cchhhhhHHHH-HHHHHHHHHHHHHHHHhhc
Confidence 97 33333222232 4444444444444444333
No 87
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.96 E-value=4.1e-25 Score=207.19 Aligned_cols=393 Identities=13% Similarity=0.095 Sum_probs=278.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccc----ccCchhHhH
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKAMLT 85 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~~l~ 85 (445)
+..+....+-..+++....+.++.|.++ .+.+....+++..+..+...+.+|+.|+++| |+||||+++
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~--------lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~i 77 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE--------LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFI 77 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHH
Confidence 3344444555677888888999988754 3566688999999999999999999999999 599999988
Q ss_pred HH-HHHHHHHHHHHHhhcCcch--------------hHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccch--hhHHHH
Q 013312 86 LP-LTLSIIPLAILAYRRSISF--------------FYAYYALRTLTAMVCEGSINCLALAYVADNISERQR--ASAFGI 148 (445)
Q Consensus 86 ~~-~~~~~~~~~~~~~~~~~~~--------------~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~ 148 (445)
.. ....+++..+.+++++... .+..+++-.+..+ +.....+...++++|.+|+++| +.++++
T Consensus 78 l~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~-~~n~~~~p~rALiaDl~p~~~~~~~~a~~~ 156 (477)
T TIGR01301 78 AAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDV-ANNMLQGPCRAFLADLTGGDARRTRIANAY 156 (477)
T ss_pred HHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccccCchhHHHHHHHHH
Confidence 74 6667777777777765210 0223333334445 5566777889999999998865 579999
Q ss_pred HHHHHhhhhhhhhhhhhhh-------------------chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccch
Q 013312 149 LLGVLSASFVCGTLAARFL-------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIIT 209 (445)
Q Consensus 149 ~~~~~~~g~~~g~~l~~~~-------------------~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~ 209 (445)
.+...++|.++|+.+++.. +.|..|++.+++.++..++..+..||.+...+++.+.+
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~---- 232 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS---- 232 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh----
Confidence 9999999999999888753 34778999998888888888888999764322210000
Q ss_pred hhhcccccCCCCCCcccccccccchhHHHHHHhhc-chhhHHHHHHHHHHHhhhhhhHHHHHHHHH-hhcCCchh-----
Q 013312 210 EETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS-SVTLSQAAVVAFFSGLSEGGMQASFLYFLK-AQFHFNKN----- 282 (445)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~----- 282 (445)
+.++ +++.+..+.+++.++.+++ +|.++.++++.++.++++..+..+.+.|.. +.++-++.
T Consensus 233 ----------~~~~--~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y 300 (477)
T TIGR01301 233 ----------EAAP--PSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKY 300 (477)
T ss_pred ----------hccc--ccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHH
Confidence 0000 0000111234555555443 567888999999999999999888888875 45554332
Q ss_pred -h----HHHHHHHHHHHHHHHHHHHHHHhhhhhcc-hhHHHHHHHHHHHHHHHHHhcCC---------------------
Q 013312 283 -Q----FADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAACINMFICSISWS--------------------- 335 (445)
Q Consensus 283 -~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------------- 335 (445)
+ ..+......+...+.+ ++.+++.+|+|+ |+....+.++.++++....+.++
T Consensus 301 ~~gvr~G~~~l~~~s~~~~i~s-~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 379 (477)
T TIGR01301 301 DDGVRAGAFGLMLNSVVLGITS-IGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGI 379 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhh
Confidence 1 1233344555555666 566899999985 66668887788777776654331
Q ss_pred chhHH-HHHHHHhhhhhhhhhHHHHHhcccCC--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHH
Q 013312 336 AWVPY-ATTAFSVLVVFATPSFRSIVSKQVGP--NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSI 412 (445)
Q Consensus 336 ~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 412 (445)
.+..+ ...+.|+.....+..-++++++..|+ +..|..+|+.|.+..+.+.+.....|.+.+..++.+ ...+
T Consensus 380 ~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~------~~~~ 453 (477)
T TIGR01301 380 KASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGN------LPAF 453 (477)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCC------eeHH
Confidence 13222 34677888999999999999999995 456999999999999999999999999666653322 1246
Q ss_pred HHHHHHHHHHHHHHHhccCCCC
Q 013312 413 MCIGLASMVAFIQSLMMSHTPA 434 (445)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~ 434 (445)
.+.++..+++.+..+++.|+++
T Consensus 454 ~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 454 VVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC
Confidence 7788888888888877766654
No 88
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.3e-27 Score=220.85 Aligned_cols=330 Identities=15% Similarity=0.047 Sum_probs=246.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccch
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g 123 (445)
+|.+....+.+.+.+++.++++++.++.|.+.||++-.+.+..+.+.+++-.++.....| ++.+++.|++.|+ ..+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s---~~~~ialr~llGl-~es 149 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHS---FPGLIALRFLLGL-FES 149 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHH-Hhc
Confidence 555677788999999999999999999999999999999999988888888888888888 9999999999999 899
Q ss_pred hHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----------hchhhHHHHHHHHHHHHHHHHHHhccC
Q 013312 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----------LSTTSAFQAATIVSMLAAAYMRVFLKD 193 (445)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----------~~w~~~f~~~~~~~~i~~~~~~~~~~e 193 (445)
..+|....+++.|+.++||+..++++.+..++|.++|++++.. .||||.|++.+++.++..++..+.+|+
T Consensus 150 ~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 150 GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 9999999999999999999999999999999999999888755 389999999999999999999899999
Q ss_pred CCCCCCCcCCccccchhhh-cccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHH
Q 013312 194 DVPNDDDDDLTRPIITEET-EGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYF 272 (445)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (445)
.|.+..-.++.++.....+ ++.+.++. .++ .+.++ ++...+++.+|...+..++.....+++.+++|.|
T Consensus 230 ~P~~~~fl~~~ek~~~~~~~~~~~~~~~----~~~-----~~~~~-~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~ 299 (495)
T KOG2533|consen 230 NPSKAWFLTDEEKELVVERLRESPSGGI----ENK-----FKWKG-FKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLY 299 (495)
T ss_pred ChhhccccchHHHHHHHHHHHhccCCCc----ccc-----cCHHH-HHHHHhchhHHHHHHHHHHHhhccccHHHHHHHH
Confidence 8875432222111111000 00000000 000 12233 3335578889999999999999999999999999
Q ss_pred HHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh----hcchhHHHHHHHHHH-HHHHHHHhcCCchhHHHH-HHHH
Q 013312 273 LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAKLLSLGLFAAC-INMFICSISWSAWVPYAT-TAFS 346 (445)
Q Consensus 273 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~g 346 (445)
+++..|+|..+...+.....++++++. ++.+.++|| ..+|........+.. ++...+............ ....
T Consensus 300 l~~~~~~s~~~a~~ls~~~~~~g~v~~-i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~ 378 (495)
T KOG2533|consen 300 LKSNGGYSELQANLLSTPYDVGGIVGL-ILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGP 378 (495)
T ss_pred HHcCCCcChHHhccccchHHhhhHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcc
Confidence 999667999999999999999999988 888999999 455555554444443 333444444434433333 3334
Q ss_pred hhhhhhhhhHHHHHhcccCCccch-hHHHHHHHHHHHHHHHHH
Q 013312 347 VLVVFATPSFRSIVSKQVGPNEQG-KAQGCISGISSFANIVSP 388 (445)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~g-~~~g~~~~~~~~g~~i~~ 388 (445)
.+.....+......++....+.|. +..+......+.++.++|
T Consensus 379 ~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~ 421 (495)
T KOG2533|consen 379 YGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISG 421 (495)
T ss_pred hhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhh
Confidence 556667777788887777555443 333333334444444443
No 89
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=3.6e-28 Score=215.95 Aligned_cols=414 Identities=13% Similarity=0.090 Sum_probs=286.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHH
Q 013312 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (445)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 91 (445)
+.-.+.|.+..+.+.+.++.|.+.+...+...+.-+.+....+.+..+..+|..++++++|++.||+|||+++...+++.
T Consensus 45 iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liIm 124 (538)
T KOG0252|consen 45 IAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIM 124 (538)
T ss_pred HhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHH
Confidence 33455677888888888888877765443333334566677889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCcc----hhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh
Q 013312 92 IIPLAILAYRRSIS----FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (445)
Q Consensus 92 ~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (445)
.+++++++++...+ ...++...|++.|+ |.|.-+|...+..+|...+++||...+.+-+.++.|.+.|.+++-.+
T Consensus 125 Ii~t~~~~~s~~~~~~~~~m~~L~~~R~~LGi-GIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv 203 (538)
T KOG0252|consen 125 IICSALSGLSVGTTSPLGVMMTLCFFRFLLGI-GIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIV 203 (538)
T ss_pred HHHHHHhccCCCCCCCcchhhHHHHHHHHhhc-cccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHH
Confidence 99999888764332 37899999999999 99999999999999999999999999999988888888876655331
Q ss_pred -------------------chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCc-CCccccchhhhcccccCCCC-CCccc
Q 013312 168 -------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDD-DLTRPIITEETEGVNQNESN-SPVKI 226 (445)
Q Consensus 168 -------------------~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~ 226 (445)
-||..|.+.++++++. ++....+||+++.+... +|.+++.+..++..+.+-+. +...+
T Consensus 204 ~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~-ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~ 282 (538)
T KOG0252|consen 204 SAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLV-LYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAES 282 (538)
T ss_pred HHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHH-HHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhcccc
Confidence 4899999988886554 55567889987744111 11111111000000000000 00011
Q ss_pred ccccccchhHHHHHHhhc--chhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHH--------HHHHHHHHHH
Q 013312 227 PVCKKIPSIRDLICLLRS--SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD--------LMLIAGLAGT 296 (445)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~--------~~~~~~~~~~ 296 (445)
.....++..+...+.+.+ -+.+.......|+...+++....+....++. .|+.+....+ ...+....+.
T Consensus 283 ~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~ 361 (538)
T KOG0252|consen 283 DVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCST 361 (538)
T ss_pred CCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHcc
Confidence 111111122222222322 2566777778888888888888888888875 5665544332 2222223333
Q ss_pred HHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCch----hHH-H-HHHHHhhhhhhhhhHHHHHhcccCCccch
Q 013312 297 ISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW----VPY-A-TTAFSVLVVFATPSFRSIVSKQVGPNEQG 370 (445)
Q Consensus 297 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 370 (445)
+....+...++|++||++..+.++.++.+..+.++...+.. ... + .+...++.-........+.+|.+|.+.||
T Consensus 362 vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~ 441 (538)
T KOG0252|consen 362 VPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRS 441 (538)
T ss_pred CCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhh
Confidence 32224555679999999999999999999999888766521 111 1 22233444445566666789999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 371 KAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 371 ~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
+..|+....+..|++++...+.++.++- +.. .......+++.+.+.+++.+..+.+++
T Consensus 442 t~hGIsAA~GK~GAivg~~~F~~~t~~~--yp~-~~g~~~v~~i~~~~~~~gi~~T~l~pE 499 (538)
T KOG0252|consen 442 TCHGISAASGKAGAIVGAFGFLYLTDHN--YPP-NIGVRNVFIILAGCMLLGILFTLLIPE 499 (538)
T ss_pred hhhhHHHHhccchHHHHHHHhhHhhhcc--CCc-cccchHHHHHHHHHHHHhHheeEEeec
Confidence 9999999999999999999999988852 111 123344678888888888888888874
No 90
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=4.6e-26 Score=221.04 Aligned_cols=394 Identities=16% Similarity=0.128 Sum_probs=262.3
Q ss_pred HhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCc
Q 013312 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (445)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 104 (445)
+...+..+.+.++.. ....+.+....+.+++.+...++..+++++.|+++|++|||+.++.+.+.+.++.+++++++|
T Consensus 64 g~~s~~~~~~~~~~~-~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~- 141 (513)
T KOG0254|consen 64 GGISGALDFLQRFAS-LYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPS- 141 (513)
T ss_pred ccchhhHHHHHhccc-ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh-
Confidence 455566666655321 111111111146699999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh-----chhhHHHHHHHH
Q 013312 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIV 179 (445)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-----~w~~~f~~~~~~ 179 (445)
+++++++|+++|+ |.|........+++|..|++.|+...+..+....+|..++..++... +||..+.+..+.
T Consensus 142 --~~~l~~GR~l~G~-g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~ 218 (513)
T KOG0254|consen 142 --WYQLIVGRILTGL-GVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIP 218 (513)
T ss_pred --HHHHHHHHHHhcc-chhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHH
Confidence 9999999999999 88888899999999999999999999999999999999997777665 699999999988
Q ss_pred HHHHHHHHHHhccCCCCCCCCcCC---ccccchhhhcccccCC--CCCCcc-----cccccccc-hhHHHHHHhhcchhh
Q 013312 180 SMLAAAYMRVFLKDDVPNDDDDDL---TRPIITEETEGVNQNE--SNSPVK-----IPVCKKIP-SIRDLICLLRSSVTL 248 (445)
Q Consensus 180 ~~i~~~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~ 248 (445)
+++..+. .+++||+|+...++.+ .++.+.......+.+. +.+... +......+ .+++..+...+++..
T Consensus 219 ~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 297 (513)
T KOG0254|consen 219 AVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLI 297 (513)
T ss_pred HHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHH
Confidence 8777766 7889999985443322 2223332222110000 000000 00000111 122322211222333
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHH
Q 013312 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (445)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (445)
....+..+....+......+.+.+++. .|.+... .......++...++. .+...+.||+|||++++.+...+.++.+
T Consensus 298 i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t-~~~~~lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 298 IGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGT-LVATYLVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHhHHHHHHHHH
Confidence 334444444444555566777777766 5666443 444455566666666 5557999999999999999999999888
Q ss_pred HHHhcC----C--------chhHHH-H-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 329 ICSISW----S--------AWVPYA-T-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 329 ~~~~~~----~--------~~~~~~-~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 394 (445)
+++... . .+..+. . ...........|..+.+.+|.+|.+.|+++.++....+.+.+.+-......+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~ 454 (513)
T KOG0254|consen 375 ILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFI 454 (513)
T ss_pred HHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 776531 1 122222 2 2223344445677778899999999999999999999998877776665555
Q ss_pred HHhhhcCCCCcccchhHHHHHHHHHHHHHH-HHHhccCCCCC
Q 013312 395 TALFLSKGAPFNFPGFSIMCIGLASMVAFI-QSLMMSHTPAS 435 (445)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 435 (445)
.+.. .... .+...+..+.+... ..+...+|++.
T Consensus 455 ~~~~-------~~~~-~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 455 TEAL-------GIGG-TFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred HHhc-------cccc-hHHHHHHHHHHHHHHHheEEcccCCC
Confidence 5543 1111 23333334444444 55555555543
No 91
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.95 E-value=1.1e-24 Score=188.86 Aligned_cols=326 Identities=15% Similarity=0.143 Sum_probs=264.3
Q ss_pred HhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCc
Q 013312 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (445)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 104 (445)
..+.|.++.+. +++++|....|++.++..+...+.+++..+++.|+|.++.+..++++.+++.++-... +
T Consensus 29 tsvgPLL~~Ir--------~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~- 98 (395)
T COG2807 29 TSVGPLLDEIR--------QDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-G- 98 (395)
T ss_pred hhhhhhHHHHH--------HHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-c-
Confidence 34455555553 6678999999999999999999999999999999999999999999999999998888 5
Q ss_pred chhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhh----hhhh-chhhHHHHHHHH
Q 013312 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA----ARFL-STTSAFQAATIV 179 (445)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l----~~~~-~w~~~f~~~~~~ 179 (445)
.+.++.+-.+.|. +.+..+...++.+.+.+| |+-+..+++++...++|..+++.+ .... +||....+-+.+
T Consensus 99 --~~~L~~gt~l~G~-gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~ 174 (395)
T COG2807 99 --LPLLFLGTLLAGA-GIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALL 174 (395)
T ss_pred --HHHHHHHHHHHHh-hHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHH
Confidence 6889999999999 999999999999999998 677899999999998887776544 4444 799999888888
Q ss_pred HHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHH
Q 013312 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (445)
Q Consensus 180 ~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (445)
+++.++. ++|...+++..+ ...+.++..+ ++++|.-|.+.+...+.+
T Consensus 175 allAl~~---WlPq~~r~~~~~--------------------------~~~~~~~~~~----vw~~~~aW~vtLfmGlqS 221 (395)
T COG2807 175 ALLALLI---WLPQALREQAAS--------------------------IATKLVSVRK----VWRSPLAWQVTLFMGLQS 221 (395)
T ss_pred HHHHHHH---Hhhhcccccccc--------------------------cccccccccc----cccCchhHHHHHHHHhhH
Confidence 7766543 345432221110 0000011112 567788899999999999
Q ss_pred hhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc-chhHHHHHHHHHHHHHHHHHhcCCchh
Q 013312 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG-EAKLLSLGLFAACINMFICSISWSAWV 338 (445)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (445)
+.++....|+|.++.| .|+|+++.|.+.+...+..+..+ +..+.+.+|.+ +|+.......++.++.+.+.+.+....
T Consensus 222 ~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~-ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~ 299 (395)
T COG2807 222 LLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTA-LLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLP 299 (395)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHH-HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 9999999999999999 59999999999999999999998 88899998654 566777777788888887777665444
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHhcccC-CccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013312 339 PYATTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (445)
Q Consensus 339 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 399 (445)
....+++|++.+..+|.....+.+..+ +++.++-.|+.+..+++-...||.++|++.|..+
T Consensus 300 ~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 300 ILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred HHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 444688899999999999998876664 4666888999999999999999999999999984
No 92
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=9.7e-26 Score=214.08 Aligned_cols=360 Identities=16% Similarity=0.140 Sum_probs=270.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHH-HHHhhhccc
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYAL-RTLTAMVCE 122 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l~G~~~~ 122 (445)
++++.+..+++|+.++......+..|+.+.+.||+|.|++.+.+.++.+++.++.+++++ +|.+++. -++.|+ |.
T Consensus 74 ~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~---i~~l~lt~gvi~G~-G~ 149 (509)
T KOG2504|consen 74 DYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATS---LWQLYLTFGVIGGL-GL 149 (509)
T ss_pred HHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHhhc-cc
Confidence 334555566899999999999999999999999999999999999999999999999999 7666554 567788 88
Q ss_pred hhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 013312 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPND 198 (445)
Q Consensus 123 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~ 198 (445)
+..+......+..+++ ++|+.+.|+...+.++|..+=|.+... .|||+.+++.+.+.+-..+.....-|.+++.+
T Consensus 150 ~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~ 228 (509)
T KOG2504|consen 150 GLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKK 228 (509)
T ss_pred hhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC
Confidence 8888888888887766 899999999999999998887777665 49999999988887666555555555333322
Q ss_pred CC-cCCccccc---hh-------hh---cccccC---CCCCCccccccccc-chhHHHH----HHhhcchhhHHHHHHHH
Q 013312 199 DD-DDLTRPII---TE-------ET---EGVNQN---ESNSPVKIPVCKKI-PSIRDLI----CLLRSSVTLSQAAVVAF 256 (445)
Q Consensus 199 ~~-~~~~~~~~---~~-------~~---~~~~~~---~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~ 256 (445)
+. .++.+... +. .. +....+ .+.....+.+.+.. .+.+... ..+++++.++...+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~ 308 (509)
T KOG2504|consen 229 PNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNL 308 (509)
T ss_pred chhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHH
Confidence 21 00000000 00 00 000000 00000000000000 0111111 23567788888888888
Q ss_pred HHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc--chhHHHHHHHHHHHHHHHHHhcC
Q 013312 257 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFICSISW 334 (445)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 334 (445)
+...++.....++|.|.++ .|++..+.+.+++..++..+++. ++.|++.|+.. ++.+..++.+..+++.+...+.+
T Consensus 309 ~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gR-i~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~ 386 (509)
T KOG2504|consen 309 FAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGR-IILGLLADKPGIRALVLFLLTLLIAGLARLFLPFAT 386 (509)
T ss_pred HHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhh-hhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888999999999999996 79999999999999999999999 88899999877 45566777777777777888888
Q ss_pred CchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchh
Q 013312 335 SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGF 410 (445)
Q Consensus 335 ~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~ 410 (445)
+.+.+.. +.++|+..+.........+.|.++.++-..+.|+...++.++..+||++.|++.|..++++..+...+.
T Consensus 387 ~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~ 463 (509)
T KOG2504|consen 387 TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGL 463 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcCh
Confidence 8876666 477888888888888889999999999999999999999999999999999999998666665544444
No 93
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.95 E-value=1.3e-24 Score=197.56 Aligned_cols=387 Identities=15% Similarity=0.110 Sum_probs=262.9
Q ss_pred hHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhH
Q 013312 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (445)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 85 (445)
+++..+.+....++..+.++...|..|.++++ ..+++..++|.+.++..+...+.+|+.|.++||.|.||-++
T Consensus 5 ~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~-------~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll 77 (412)
T PF01306_consen 5 KNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQ-------VAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLL 77 (412)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------ccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHH
Confidence 35677788888888999999999999999974 24888899999999999999999999999999999777655
Q ss_pred HHHHHH---HHHHHHHHhhcC--cchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhh
Q 013312 86 LPLTLS---IIPLAILAYRRS--ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (445)
Q Consensus 86 ~~~~~~---~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 160 (445)
....+. ........+.|- .+.+...+++-+..|+ .-....|...+++.+.. ++.+.-.|-..+..++|.+++
T Consensus 78 ~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~-~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~ 154 (412)
T PF01306_consen 78 WFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGL-VFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIA 154 (412)
T ss_dssp HHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTT-TTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHH
Confidence 443222 122222233221 0102334444455565 44555677788777665 344556777888888899888
Q ss_pred hhhhhhh---chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHH
Q 013312 161 TLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (445)
Q Consensus 161 ~~l~~~~---~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (445)
..++|.+ +-+..|++....+++..++..+.-|+.+++.+.. | .+..++++.+.++
T Consensus 155 s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~-~---------------------~~~~~~~~~~~~~ 212 (412)
T PF01306_consen 155 SLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVA-D---------------------ALGAKKDKVSLKD 212 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SS-T---------------------TSSS------HHH
T ss_pred HHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhh-c---------------------ccccCCCCCcHHH
Confidence 8888874 4567788777665555444433333333222111 0 0011112223455
Q ss_pred HHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhc---CCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchh
Q 013312 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (445)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (445)
..+ ++|+|++|.+.+........+..+...+|.|.+..+ +.+....|++.+..-+..++.. ...+++.+|+|.|+
T Consensus 213 ~~~-l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m-~~~p~li~rig~k~ 290 (412)
T PF01306_consen 213 VLS-LFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMM-FFSPWLINRIGAKN 290 (412)
T ss_dssp HHH-HTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHH
T ss_pred HHH-HhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHH-HHHHHHHHhcChHh
Confidence 343 557788887777666666666777777888887633 3344567888888877777766 88899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHH-HHHHHHHHHHHHHHHH
Q 013312 315 LLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCI-SGISSFANIVSPLIFS 392 (445)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~i~~~~~g 392 (445)
.++++..++.+-....++.++++.+... .+.++-.........-++++.+|++..++...+. +...+++..+.+.+.|
T Consensus 291 ~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G 370 (412)
T PF01306_consen 291 LLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAG 370 (412)
T ss_dssp HHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 9999999999999999999999887776 8889999999999999999999999999999885 6777999999999999
Q ss_pred HHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHH-hccCCCC
Q 013312 393 PLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL-MMSHTPA 434 (445)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 434 (445)
.++|+. ++... +.+.+.+.+...+... .++++++
T Consensus 371 ~lyd~~-------G~~~t-ylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 371 YLYDRI-------GFQHT-YLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHH-------HHHHH-HHHHHHHHHHHHHHHHHHS--SSS
T ss_pred hhHhhc-------CcHHH-HHHHHHHHHHHHHHheeeecCCCc
Confidence 999998 44444 4455555555444444 4444433
No 94
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.95 E-value=5.5e-24 Score=201.06 Aligned_cols=354 Identities=14% Similarity=0.140 Sum_probs=265.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccccccCchhHhH-HHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHH
Q 013312 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (445)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~ 128 (445)
....++..++..+..++..|+.|.++|+-|+||.++ ....+..+.+..+.+.+. +.++...+.-++.-+ +.+.....
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~-~~~~~~~~l~iia~v-~~~~~~vf 146 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSP-GQWWLALVLFIIANV-GYEASNVF 146 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCc-chHHHHHHHHHHHHH-HHHHHHHH
Confidence 345678899999999999999999999998876655 455666667777777532 224444444444444 66666778
Q ss_pred HHHHHhcCCCccch--------------------------hhHHHHHHHHHhhhhhhhhhhhhh------------hchh
Q 013312 129 ALAYVADNISERQR--------------------------ASAFGILLGVLSASFVCGTLAARF------------LSTT 170 (445)
Q Consensus 129 ~~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~l~~~------------~~w~ 170 (445)
.++++.|..+++++ ++..+.-.....+|.++.-.+.-. .+-|
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 99999999999888 888887777777777665443322 1248
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHH
Q 013312 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQ 250 (445)
Q Consensus 171 ~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (445)
..+.+.++..++..+...+.+||.|++++.+.. ........+.+++.++..+|.|.+..
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~---------------------~~~~~~g~~~l~~t~k~~~~~~~~~~ 285 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG---------------------SSYLRFGFKRLWRTFKEIRKLRQLFL 285 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc---------------------hhHHHHHHHHHHHHHHHHHhChHHHH
Confidence 888888888888888888888987763222100 00001111233444556778888888
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcch--hHHHHHHHHHHHHHH
Q 013312 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA--KLLSLGLFAACINMF 328 (445)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~ 328 (445)
.++..+++.-+..++..+...|.++.+|++..+...+.....+.++++. ++.+++.||+|.| +++..+.....+..+
T Consensus 286 fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga-~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 286 FLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGA-LLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 7889999999998 777777666544333
Q ss_pred HHHh--------cCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013312 329 ICSI--------SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (445)
Q Consensus 329 ~~~~--------~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 399 (445)
.-.+ ..+.|.++. ..+.|+..+..++...++.++..|+++.++.+|++...+.....+||.+.|.+.+.++
T Consensus 365 ~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg 444 (477)
T PF11700_consen 365 YGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG 444 (477)
T ss_pred HHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3333 345566665 4788999999999999999999999999999999999999999999999999999984
Q ss_pred cCCCCcccchhHHHHHHHHHHHHHHHHHhccCCCC
Q 013312 400 SKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 434 (445)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (445)
+.+. .+....++.++++++....+.++.
T Consensus 445 ~~r~-------g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 445 SQRY-------GFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred Cchh-------HHHHHHHHHHHHHHHHhhccchhh
Confidence 3332 345556666777777766665544
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=9.8e-32 Score=258.21 Aligned_cols=406 Identities=17% Similarity=0.185 Sum_probs=265.1
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHH---hcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHH
Q 013312 15 VTVFLWGFATMMVVPAITDVTMM---ALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (445)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 91 (445)
++.+...++...+.+..+..... ......++.+.+..+.++..+...++..+++++.|.++||+|||+.+..+.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 34466777776666655555422 111122222335567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc---CcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh--
Q 013312 92 IIPLAILAYRR---SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-- 166 (445)
Q Consensus 92 ~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-- 166 (445)
.++.++.++++ + ++.+.++|++.|+ +.|...+....++.|..|+++|++..++.+....+|..++..++..
T Consensus 87 ~i~~~~~~~~~~~~~---~~~~~~~R~~~G~-~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~ 162 (451)
T PF00083_consen 87 IIGSILIAFAPSYNN---FWMLLIGRFLIGF-GIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVS 162 (451)
T ss_pred ccccccccccccccc---ccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 7 9999999999999 8898889999999999999999999999999999998888766543
Q ss_pred --hc---hhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCc---CCccccchhhhcccccCCCCCCcccccc---cccchh
Q 013312 167 --LS---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDD---DLTRPIITEETEGVNQNESNSPVKIPVC---KKIPSI 235 (445)
Q Consensus 167 --~~---w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 235 (445)
.+ ||..+.+.++++++..+ ...++||+|+....+ +++++..++.++.+..+++.++..++.+ +.+..+
T Consensus 163 ~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (451)
T PF00083_consen 163 YYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASW 241 (451)
T ss_pred cccccccccccccccccccccccc-cccccccccceecccccccccccccccccccccccccccccccccccccccceee
Confidence 24 99999999888766544 447899999854333 3444444442222111111111111111 111223
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHhhh-hhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchh
Q 013312 236 RDLICLLRSSVTLSQAAVVAFFSGLSE-GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (445)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (445)
++.++....++++...+.......... .....+.+...++ .+.+.. -......++...++. +...++.||+|||+
T Consensus 242 ~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~GRr~ 317 (451)
T PF00083_consen 242 RDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGT-LLAIFLIDRFGRRK 317 (451)
T ss_pred eeccccccccccccccccccccccccccccccccccccccc-cccccc--ccccccccccccccc-cccccccccccccc
Confidence 332221111122222222232232222 2333444545544 566666 112223334444444 55568999999999
Q ss_pred HHHHHHHHHHHHHHHHH--h---cCC----chhHHH-HHHHHhhhh-hhhhhHHHHHhcccCCccchhHHHHHHHHHHHH
Q 013312 315 LLSLGLFAACINMFICS--I---SWS----AWVPYA-TTAFSVLVV-FATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 383 (445)
Q Consensus 315 ~~~~~~~~~~~~~~~~~--~---~~~----~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 383 (445)
++..+.....++.+.+. . .++ ....+. ..+.....+ ...+....+..|.+|++.|+++.|+....+.++
T Consensus 318 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~ 397 (451)
T PF00083_consen 318 LLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIG 397 (451)
T ss_pred ccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccc
Confidence 99888888877776664 1 111 111112 222222222 456777788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 013312 384 NIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPASSK 437 (445)
Q Consensus 384 ~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (445)
+.++|.+...+.+... ....+.+.+.++++..+..+...||++.+.
T Consensus 398 ~~i~~~~~~~~~~~~~--------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~ 443 (451)
T PF00083_consen 398 GFIIPFLFPYLFNNLG--------GWGVFLIFAGVCLIAIIFVYFFLPETKGKT 443 (451)
T ss_pred cccccccccccccccc--------ccccchhhHHHHHHHHhheeEEEeeCCCCC
Confidence 9999999888877641 111245555555666666666666665443
No 96
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=2.8e-26 Score=225.56 Aligned_cols=366 Identities=14% Similarity=0.190 Sum_probs=257.1
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHH
Q 013312 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (445)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 95 (445)
..+...+..+...+.++.+. ++++++..+.|++.+.+.++++++.++.|++.||+|||+.+.++.++.+++.
T Consensus 41 ~~~~~~~~~g~~~~~l~~ie--------k~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIE--------RRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHhhchhhh--------hhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 34444455566667777664 4567788889999999999999999999999999999999999999999999
Q ss_pred HHHHhhc----------------------------C--------------------cchhHHHHHHHHHhhhccchhHHH
Q 013312 96 AILAYRR----------------------------S--------------------ISFFYAYYALRTLTAMVCEGSINC 127 (445)
Q Consensus 96 ~~~~~~~----------------------------~--------------------~~~~~~l~~~r~l~G~~~~g~~~~ 127 (445)
+++++.+ + ...+..++++|+++|+ +.+...+
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~Gi-G~~~~~~ 191 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGI-GATPIFP 191 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhc-cCCcchh
Confidence 9988763 0 0025677899999999 8899999
Q ss_pred HHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh--------------------------chhhHHHHHHHHHH
Q 013312 128 LALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--------------------------STTSAFQAATIVSM 181 (445)
Q Consensus 128 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~--------------------------~w~~~f~~~~~~~~ 181 (445)
...+++.|++|+++|+++++++.....+|.++|+++++.+ .|+..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888652 16777888887776
Q ss_pred HHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhh
Q 013312 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLS 261 (445)
Q Consensus 182 i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (445)
+..+.. +.+|++.++..++.+.+.. +. +..++.++.. ............+..+.+.++|.++...+..++....
T Consensus 272 l~~v~l-~~~p~~lp~~~~~~~~~~~-~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~ 345 (633)
T TIGR00805 272 LTSIPF-FFFPKALPKEGKRVNVDVH-ET--EKLEKSEDKS--RKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLA 345 (633)
T ss_pred HHHHHH-HhCccccCCcccccchhhh-hh--hccccccccc--chhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 665544 5566544322111000000 00 0000000000 0000001112223344577888898888888888899
Q ss_pred hhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHH-HHHHHHHHHHHhhhhhc--chhHHHHHHHHHHHHHHHHHh------
Q 013312 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA-GTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFICSI------ 332 (445)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~------ 332 (445)
..++..++|.|+++.+|+++.+++++.....+. .+++. +++|++.||++ .|+.+..+.++..++.+....
T Consensus 346 ~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~-~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C 424 (633)
T TIGR00805 346 FNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGY-LIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGC 424 (633)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHH-hhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecC
Confidence 999999999999999999999999998887764 45555 88899999988 456666666666665433110
Q ss_pred ---------------------c----------CC---c------------------------------------------
Q 013312 333 ---------------------S----------WS---A------------------------------------------ 336 (445)
Q Consensus 333 ---------------------~----------~~---~------------------------------------------ 336 (445)
. .+ +
T Consensus 425 ~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~ 504 (633)
T TIGR00805 425 ESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSS 504 (633)
T ss_pred CCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCC
Confidence 0 00 0
Q ss_pred -----------hhHHH---H-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHH-HHHHHHHHHHHHHHHh
Q 013312 337 -----------WVPYA---T-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS-FANIVSPLIFSPLTAL 397 (445)
Q Consensus 337 -----------~~~~~---~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~i~~~~~g~l~~~ 397 (445)
..++. . ++..+............+.+.+|+|+|.-+.|+...+.+ +|.+-+|.++|++.|.
T Consensus 505 a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 505 AKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDV 581 (633)
T ss_pred CcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhc
Confidence 00110 0 111222233334445566788999999999999998886 5778899999999996
No 97
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=6.5e-25 Score=214.30 Aligned_cols=340 Identities=18% Similarity=0.127 Sum_probs=235.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhH
Q 013312 46 CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSI 125 (445)
Q Consensus 46 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~ 125 (445)
...+.....+..+++.+|.++|++++|.++||+|||++++.+.++..++.+..++++| ++.+++.|++.|+ +.+..
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~---~~~~~~~Rfl~G~-~~~~~ 188 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN---YWMFLIFRFLSGF-FGSGP 188 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hccch
Confidence 3456678889999999999999999999999999999999999999999999999999 9999999999999 77777
Q ss_pred HHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh--chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCC
Q 013312 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL 203 (445)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~--~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~ 203 (445)
......++.|+.++++|+.+..+ ......+..+++..++++ +||+.+++..++.++.+++ ++..||+++....+.+
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~ 266 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGR 266 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCc
Confidence 78999999999999999999999 666666666677666664 7999999999988776555 5667799986544444
Q ss_pred ccccchhhhcccc---cCCCCCC----c-ccccccccc-hhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 013312 204 TRPIITEETEGVN---QNESNSP----V-KIPVCKKIP-SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLK 274 (445)
Q Consensus 204 ~~~~~~~~~~~~~---~~~~~~~----~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (445)
.++..+..++..+ ......+ . .....+... ..+.....+.+.+.+....+...+..+.....+.-++....
T Consensus 267 ~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~ 346 (521)
T KOG0255|consen 267 IDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVS 346 (521)
T ss_pred hHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhh
Confidence 3333332222111 1111000 0 000000000 00011222334443333333333333333332333333333
Q ss_pred hhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCch---hHHH-HHHHHhhhh
Q 013312 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW---VPYA-TTAFSVLVV 350 (445)
Q Consensus 275 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~g~~~~ 350 (445)
+ +|.+... .....+....... ...+...|+.|||.....+..+..++.+..++..... .... ..+..++.+
T Consensus 347 ~-lg~~~~~---~~~~~~~~~~p~~-~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (521)
T KOG0255|consen 347 G-LGGNIYL---NFTLSGLVELPAY-FRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIG 421 (521)
T ss_pred h-cCchHHH---HHHHHHHHHhhHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Confidence 2 4544433 3333444555544 6667889999999999999999999998888866432 2333 344456677
Q ss_pred hhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 351 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
..+.....+..|.+|+..|+.+.+..+....++.+++|.+.-....
T Consensus 422 ~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 422 SAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7777779999999999999999999999999999999987654433
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=3.2e-24 Score=206.62 Aligned_cols=369 Identities=10% Similarity=0.049 Sum_probs=230.2
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccc-cCchhHhH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLT 85 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~ 85 (445)
++.++.++...+...++.....+.++.+..+. ++.+..+.+++.+.+........++.|+++|| +|||+.+.
T Consensus 20 p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~-------lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~ 92 (500)
T PRK09584 20 PKAFYLIFSIELWERFGYYGLQGIMAVYLVKQ-------LGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIM 92 (500)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 44677888888888899888888999998643 35555566777777666666666789999999 59999999
Q ss_pred HHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccc--hhhHHHHHHHHHhhhhhhhhhh
Q 013312 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ--RASAFGILLGVLSASFVCGTLA 163 (445)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~l 163 (445)
.+.++.+++..+++++++. .+.+++.|+++|+ +.|...|...+++.|++|+++ |.+++++++...++|..+||.+
T Consensus 93 ~g~~~~~ig~~l~~~~~~~--~~~l~~~~~l~gi-g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i 169 (500)
T PRK09584 93 LGAIVLAIGYALVAWSGHD--AGIVYMGMATIAV-GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHhccc--HHHHHHHHHHHHH-hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence 9999999999999887531 5667788999999 888888888999999998643 4568888899999999999988
Q ss_pred hhh----hchhhHHHHHHHHHHHHHH---HHHHhccCCCCCCC-CcCCccccchhh---------hcccccCCCCCCccc
Q 013312 164 ARF----LSTTSAFQAATIVSMLAAA---YMRVFLKDDVPNDD-DDDLTRPIITEE---------TEGVNQNESNSPVKI 226 (445)
Q Consensus 164 ~~~----~~w~~~f~~~~~~~~i~~~---~~~~~~~e~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 226 (445)
++. .|||+.|.+.++...+..+ .....++|..++.+ ++.|..+..... ..-...+.+ ...
T Consensus 170 ~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 246 (500)
T PRK09584 170 TPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQE---IAR 246 (500)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcch---HHH
Confidence 876 4899999988764444332 22334444321111 111111100000 000000000 000
Q ss_pred ccccc------cchhHHHHHH-hhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHh----hc-----CCchhhHHHHHHH
Q 013312 227 PVCKK------IPSIRDLICL-LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKA----QF-----HFNKNQFADLMLI 290 (445)
Q Consensus 227 ~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----g~~~~~~g~~~~~ 290 (445)
..... ....++..+. -.++++.+..+. .++....+.......|.++.. .. |+. ...+++.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~~~s~ 324 (500)
T PRK09584 247 MALGVVALGIVVIFGKEAFAMKGAARRKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQYQAL 324 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHHHHHH
Confidence 00000 0000000000 001122222222 223333344444444444332 11 111 124566677
Q ss_pred HHHHHHHHHHHHH----HHhhhhhcchhHHHHHHHHHHHHHHHHHhcCC---------c-hhHHHHHHHHhhhhhhhhhH
Q 013312 291 AGLAGTISQLLFM----PLLAPILGEAKLLSLGLFAACINMFICSISWS---------A-WVPYATTAFSVLVVFATPSF 356 (445)
Q Consensus 291 ~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~g~~~~~~~~~~ 356 (445)
..+..++.. .+. +++.||.+..+.+.+|+++.+++++.+....+ . |......+.+++.....|..
T Consensus 325 n~i~iil~~-p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g 403 (500)
T PRK09584 325 NPFWIMIGS-PILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLG 403 (500)
T ss_pred hHHHHHHHH-HHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHH
Confidence 776666665 444 44445555567788889999999888766433 2 34444578899999999999
Q ss_pred HHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHH
Q 013312 357 RSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF 391 (445)
Q Consensus 357 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 391 (445)
.+++.+..|++.||+++|.......+|..++..+.
T Consensus 404 ~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 404 LAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999976666665555554444
No 99
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.94 E-value=5.5e-24 Score=188.84 Aligned_cols=376 Identities=13% Similarity=0.093 Sum_probs=282.6
Q ss_pred HhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhH-HHHHHHHHHHHHHHhhcC
Q 013312 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-LPLTLSIIPLAILAYRRS 103 (445)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~~~~~~~~~~ 103 (445)
-.....+|.|.++..+.+..+..-+....|...++..+..++.+|..|.++|+.|+||... ....+..++.....+.++
T Consensus 32 ivtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~ 111 (438)
T COG2270 32 IVTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPP 111 (438)
T ss_pred eeeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCC
Confidence 3445677888887544332233444567899999999999999999999999999876655 455566666777777766
Q ss_pred cchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh------h------------
Q 013312 104 ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA------R------------ 165 (445)
Q Consensus 104 ~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~------~------------ 165 (445)
...++..++.-.+..+ +........++++.|..++++-++..+.-.....+|..+--+.. +
T Consensus 112 ~s~~~~~l~~~il~~i-~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l 190 (438)
T COG2270 112 GSYLLLLLLFLILASI-GFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGL 190 (438)
T ss_pred CchHHHHHHHHHHHHH-hcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeecc
Confidence 4336677777778888 77777788999999999998877776665555555554322211 1
Q ss_pred ----hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHH
Q 013312 166 ----FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (445)
Q Consensus 166 ----~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (445)
...-|..+.+.++..++..+..++..|+.++...+. ........+.+++.++.
T Consensus 191 ~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~-----------------------~~~l~~g~k~L~~t~k~ 247 (438)
T COG2270 191 PPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPP-----------------------PTALRNGFKELKSTFKE 247 (438)
T ss_pred CccccccchhHHHHHHHHHHHHHhHHHhcccccccccccc-----------------------hHHHHHHHHHHHHHHHH
Confidence 013478888888888887777777777765422110 00011112234455666
Q ss_pred hhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 013312 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (445)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (445)
.++++.+...++..+++.-+..+...+...|....+|++..+...+.....+.+++++ ++.|++.||+|.|+++..+.+
T Consensus 248 i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~-ii~g~Ld~rfg~k~vl~~~lv 326 (438)
T COG2270 248 IRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGA-IIAGFLDERFGSKPVLMIGLV 326 (438)
T ss_pred HhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCceeehHHHH
Confidence 7888899999999999999999999999999998899999999999999999999999 888999999999999999988
Q ss_pred HHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 013312 322 AACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLS 400 (445)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~ 400 (445)
+..+..+...+......++. ..+.|...+..+....++..+.+|+++.++.+|+++..+..+...||.+.+.+.+.+++
T Consensus 327 i~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 327 ILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 88777776666655444444 58889999999999999999999999999999999999999999999999999998744
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHhccCC
Q 013312 401 KGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 432 (445)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (445)
.+. .+....++.++++...++.+.+
T Consensus 407 ~r~-------g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 407 SRA-------GVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hhh-------HHHHHHHHHHhhHhhEEeecCC
Confidence 332 2344455566666666655544
No 100
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=3.6e-24 Score=184.98 Aligned_cols=373 Identities=14% Similarity=0.036 Sum_probs=254.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccch
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g 123 (445)
...+.+..+..++......+..+++..+|..+|++|||+.+........+...+.+.++| +..+.+.|.+.|+ |.|
T Consensus 106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spn---f~~L~~f~~l~~~-g~g 181 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPN---FASLCVFRALWGF-GVG 181 (528)
T ss_pred hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCC---eehhhHHHHHHhc-cCC
Confidence 344677888999999999999999999999999999999999999999999999999999 9999999999999 777
Q ss_pred hHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 013312 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (445)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~ 199 (445)
. .|...++-.|..|..+|...+-.. ..+.+|.++...++-. +||||.......+..+.. ...+++||+++..-
T Consensus 182 g-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a-~f~~w~~ESpRf~~ 258 (528)
T KOG0253|consen 182 G-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAA-RFLVWVYESPRFYL 258 (528)
T ss_pred C-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH-HHHhhcccCcchhh
Confidence 7 688999999999998888766666 8888998887766543 699998888776654443 44578999998544
Q ss_pred CcCCccccchhhh---ccccc---------------CCCCCC----cccccccccchhHHHHHHhhcchhhHHHHHHHHH
Q 013312 200 DDDLTRPIITEET---EGVNQ---------------NESNSP----VKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFF 257 (445)
Q Consensus 200 ~~~~~~~~~~~~~---~~~~~---------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (445)
.+.+..++++..+ ..++. +++... +.+..++......+.+..-+++. -..+....+.
T Consensus 259 ~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkt-tlllw~iwfg 337 (528)
T KOG0253|consen 259 AKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKT-TLLLWRIWFG 337 (528)
T ss_pred hcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHH-HHHHHHHHHh
Confidence 3333333332221 11110 000000 00111112222333222212222 2223334444
Q ss_pred HHhhhhhhHHHH-----------------HHHHHhhcCCchh-hHHHH-HHHHHHHHHHHHHHHHHHhhhhhcchhHHHH
Q 013312 258 SGLSEGGMQASF-----------------LYFLKAQFHFNKN-QFADL-MLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (445)
Q Consensus 258 ~~~~~~~~~~~~-----------------~~~~~~~~g~~~~-~~g~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (445)
..+.+++..... |.+.+-..+-... +.-+. ..+..+....|. ++.+++.||+|||+.+..
T Consensus 338 nafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGl-LIt~~iverlGRKkTMal 416 (528)
T KOG0253|consen 338 NAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGL-LITGVIVERLGRKKTMAL 416 (528)
T ss_pred hHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCch-hHHHHHHHHhcchhHHHH
Confidence 444444433222 2222221111110 11111 234445556665 788999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 319 GLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
.+++..+..+.+....+...... .+..-.+..+.+.+.+.|..|.+|+..|+++.|..+.+..+|+++.|.++ ...+.
T Consensus 417 ~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~ 495 (528)
T KOG0253|consen 417 SLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL 495 (528)
T ss_pred HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc
Confidence 99999998888777665544333 35556778888899999999999999999999999999999999999888 33332
Q ss_pred hhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCCCC
Q 013312 398 FLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPAS 435 (445)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (445)
....+..+.+.+++++.+...+++-+++.
T Consensus 496 ---------s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 496 ---------STSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred ---------ceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 22224566777778888877777766653
No 101
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=6.8e-24 Score=193.59 Aligned_cols=372 Identities=10% Similarity=0.036 Sum_probs=245.1
Q ss_pred cchhhHHHH-HHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccc
Q 013312 44 DECSLAIYL-SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (445)
Q Consensus 44 ~~~~~s~~~-~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 122 (445)
++++++..+ .|.+.++++.+++++.++.|.++||+|.|+++..+.+.+++..++.+++++ +..+.+.|++.|+ +.
T Consensus 54 ~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S---l~~L~i~R~llGv-aE 129 (511)
T TIGR00806 54 TVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS---VWHMQLMEVFYSV-TM 129 (511)
T ss_pred HHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH-HH
Confidence 356777888 999999999999999999999999999999999999999999999999999 9999999999999 89
Q ss_pred hhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh---hchhhHHH---HHHHHHHHHHHHHHHhccCCCC
Q 013312 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---LSTTSAFQ---AATIVSMLAAAYMRVFLKDDVP 196 (445)
Q Consensus 123 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~---~~w~~~f~---~~~~~~~i~~~~~~~~~~e~~~ 196 (445)
|... +...++..++|+++|+++.++...+..+|.++++++++. ++||+-+. +......++ ++..+++|..++
T Consensus 130 A~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a-~~~a~~LP~~~~ 207 (511)
T TIGR00806 130 AARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFS-VFLALFLKRPKR 207 (511)
T ss_pred HHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH-HHHHHhCCCCch
Confidence 9998 999999999999999999999999999999999888876 48876543 333333333 344477885443
Q ss_pred CC--CCcCCccccchhhhcccccCCCCCCcccccccccchhHHHH---HHhhcchhhHHHHHHHHHHHhhhhhhHHHHHH
Q 013312 197 ND--DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI---CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLY 271 (445)
Q Consensus 197 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (445)
.. +++++.+.......+...+++..++....+.......+..+ +...+++.+..-.+=..+...++....++...
T Consensus 208 sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~ 287 (511)
T TIGR00806 208 SLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHT 287 (511)
T ss_pred hhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHH
Confidence 11 11100000000000000000000000000001111222222 22345555544444444444555555666655
Q ss_pred HHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcch--hHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhh
Q 013312 272 FLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA--KLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVL 348 (445)
Q Consensus 272 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ 348 (445)
..++..+-++...|..-++..+.+.+.. +..|++-.++.+. ..+.+...+.+..++++...++.|..+.. +++...
T Consensus 288 LW~~v~~~~~~yNG~veA~~tllga~~a-~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~ 366 (511)
T TIGR00806 288 LWGTLDESLNKYNGAVDAASTLLGAITS-FIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGI 366 (511)
T ss_pred HHHHcCCCccccCCHHHHHHHHHHHHHH-HHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHH
Confidence 5555433222245667777777777777 6667875555432 23444555566667777888899998886 777888
Q ss_pred hhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-h--cCCCCcccchhHHHHHHHHHHHHHHH
Q 013312 349 VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF-L--SKGAPFNFPGFSIMCIGLASMVAFIQ 425 (445)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (445)
.....+....-+++....+.-|-.+|++++..-+-+.+-..+. .|.. . +....+...+..|.+.+.+.++....
T Consensus 367 y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV---vd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~~ 443 (511)
T TIGR00806 367 YQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVV---SDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAGL 443 (511)
T ss_pred HHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEE---EcccccCCCceeEEEehhhHHHHHHHHHHHHHHH
Confidence 8888899999898888888889999999888876666555432 2321 0 11222233444566666666655443
No 102
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=2.7e-23 Score=197.54 Aligned_cols=359 Identities=14% Similarity=0.084 Sum_probs=248.1
Q ss_pred HHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhh
Q 013312 22 FATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101 (445)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~ 101 (445)
+........++.+..|. |.+ ....|+.+.+.++..+..++.|+++|.||||.+++.+.++..+|.++++.+
T Consensus 58 ~~~~~~a~~l~~I~~di---G~~------~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA 128 (599)
T PF06609_consen 58 FVLVLPASILPYINADI---GGS------DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA 128 (599)
T ss_pred HHHhccHHHHHHHHHhc---CCC------ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC
Confidence 33344455666665553 112 234678888999999999999999999999999999999999999999999
Q ss_pred cCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh----chhhHHHHHH
Q 013312 102 RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAAT 177 (445)
Q Consensus 102 ~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~ 177 (445)
+| ...++++..+.|+ +.|... .....++|..|.|.|....++...........+|.++..+ +|||.|++.+
T Consensus 129 ~~---~~~~iag~~l~Gv-gaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~ 203 (599)
T PF06609_consen 129 QN---MNTFIAGMVLYGV-GAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFI 203 (599)
T ss_pred Cc---HHHHHHHHHHHHH-hhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHH
Confidence 99 9999999999999 777665 5666799999999998888777766655555677777553 8999999999
Q ss_pred HHHHHHHHHHHHh-ccCCCCCCCCcC-Cccccchhhhc-------------------ccc-cCCCCCCcc----------
Q 013312 178 IVSMLAAAYMRVF-LKDDVPNDDDDD-LTRPIITEETE-------------------GVN-QNESNSPVK---------- 225 (445)
Q Consensus 178 ~~~~i~~~~~~~~-~~e~~~~~~~~~-~~~~~~~~~~~-------------------~~~-~~~~~~~~~---------- 225 (445)
+...+.++...++ .|++.++.+.++ ..++...+.+- ... ..++.+...
T Consensus 204 i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~ 283 (599)
T PF06609_consen 204 IWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVL 283 (599)
T ss_pred HHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHH
Confidence 8877766555443 333322111111 11111111110 111 123333211
Q ss_pred -------cccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchh---hHHHHHHHHHHHH
Q 013312 226 -------IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLAG 295 (445)
Q Consensus 226 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~g~~~~~~~~~~ 295 (445)
|.....++++.+ .+.++++|.+...++..++....++....+.|......++-|+. +.++.....+++.
T Consensus 284 Lv~F~~wE~~~~~~~Pl~P-~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~ 362 (599)
T PF06609_consen 284 LVAFVVWEWFGAPKDPLFP-HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGS 362 (599)
T ss_pred HHHHHHhhhhccCCCCcCC-HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHH
Confidence 111111222222 22343446676667777777777788888889988887777663 4677777888888
Q ss_pred HHHHHHHHHHhhhhhcc-hhHHHHHHHHHHHHHHHHHhcC--Cch-hHHHHHHHHhhhhhhhhhHHHHHhcccCCccchh
Q 013312 296 TISQLLFMPLLAPILGE-AKLLSLGLFAACINMFICSISW--SAW-VPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGK 371 (445)
Q Consensus 296 ~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 371 (445)
.++. .+.+.+..+.++ |+.++++..++.+++..++... +.. .....++.+++.+..........+-..|+++.|+
T Consensus 363 ~~g~-~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~ 441 (599)
T PF06609_consen 363 CAGA-VILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGT 441 (599)
T ss_pred HHHH-HHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHH
Confidence 8877 666788887776 4555677766666555555432 222 2333466788888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 372 AQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 372 ~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
+.|+...++.+|+.+|..+...++.
T Consensus 442 a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 442 ATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999999999999999998877764
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.93 E-value=3.4e-23 Score=198.08 Aligned_cols=343 Identities=13% Similarity=0.057 Sum_probs=231.6
Q ss_pred HHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccc----cCchhH-hHHHHHHHH
Q 013312 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAM-LTLPLTLSI 92 (445)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~~-l~~~~~~~~ 92 (445)
+-..+........++.+.. ++++++..+.|.+.++..+..++..|+.|.++|| +||||. ++.+....+
T Consensus 19 ~~~~~~~~~~~~~l~~~~t-------~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~ 91 (444)
T PRK09669 19 TACNLVWQTVMLFLAYFYT-------DVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFG 91 (444)
T ss_pred hhhhHHHHHHHHHHHHHHH-------HhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHH
Confidence 3333334455556666664 4568889999999999999999999999999998 788555 556777777
Q ss_pred HHHHHHHhhcCcc---hhHHHHHHHHHhhhccchhHHHHHHHHHhcCC-CccchhhHHHHHHHHHhhhhhhhhhhh----
Q 013312 93 IPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLAA---- 164 (445)
Q Consensus 93 ~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~---- 164 (445)
++..+....++.+ .++++++...+.+. +.........++.+|+. +++||++..++......+|..+++.+.
T Consensus 92 i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~-~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~ 170 (444)
T PRK09669 92 VVCLLTFYTPDFGATGKIIYACVTYILLSL-VYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLV 170 (444)
T ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776666565421 14556666666676 45556667789999998 468899988888888777776665432
Q ss_pred hh-------hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHH
Q 013312 165 RF-------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (445)
Q Consensus 165 ~~-------~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (445)
.. .+|+..+.+.+++..+..+...+..+|.++++++ ++.+.++
T Consensus 171 ~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~------------------------------~~~~~~~ 220 (444)
T PRK09669 171 DILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVD------------------------------NSSSVWK 220 (444)
T ss_pred HHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCc------------------------------CCCCHHH
Confidence 22 2577777777777666655555555553221100 0012334
Q ss_pred HHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHH
Q 013312 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (445)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (445)
..+..++||.++.++...++............+.|.++..+ ++...+.+.....+..+++. ++.+++.||+|+|+...
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gk~~~~~ 298 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGA-LLSERLLGKFDRVRAFK 298 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHH
Confidence 44556778888877776666655555555555555555443 33333445555556666665 77789999999999988
Q ss_pred HHHHHHHHHHHHHHh-c-CCchhHHH-HHHHHhhhhhhhhhHHHHHhcccC-------CccchhHHHHHHHHHHHHHHHH
Q 013312 318 LGLFAACINMFICSI-S-WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFANIVS 387 (445)
Q Consensus 318 ~~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~i~ 387 (445)
.+.....+....+.+ . ++.+..+. ..+.+++.+...+...++++|..+ ++..|..+|..+....+|..++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg 378 (444)
T PRK09669 299 WTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIG 378 (444)
T ss_pred HHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHH
Confidence 877665543332222 2 23443333 366788999999999999998875 2334778899999999999999
Q ss_pred HHHHHHHHHhhhcC
Q 013312 388 PLIFSPLTALFLSK 401 (445)
Q Consensus 388 ~~~~g~l~~~~~~~ 401 (445)
+.+.|.+.+.. ++
T Consensus 379 ~~i~g~ll~~~-Gy 391 (444)
T PRK09669 379 GAVVGWILAWV-DY 391 (444)
T ss_pred HHHHHHHHHHc-CC
Confidence 99999999986 44
No 104
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.93 E-value=7.1e-23 Score=197.04 Aligned_cols=350 Identities=11% Similarity=0.052 Sum_probs=244.9
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccc----ccCch-hHhHHHH
Q 013312 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRK-AMLTLPL 88 (445)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr-~~l~~~~ 88 (445)
-++.+-..+..+++.+.++.|..| ..+++...+|.+..+..+..++..|+.|.++| |+||| +.++.+.
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~-------v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~ 84 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTD-------VVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGT 84 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhh
Confidence 345555666777777888888764 45788899999999999999999999999999 66994 5556677
Q ss_pred HHHHHHHHHHHhhcCcc---hhHHHHHHHHHhhhccchhHHHHHHHHHhcCC-CccchhhHHHHHHHHHhhhhhhhhhhh
Q 013312 89 TLSIIPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLAA 164 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (445)
...+++..++...++.+ .+.++++...+.++ +.....+...++..|.. +++||.+..++.....++|..+.+.+.
T Consensus 85 i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~-~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~ 163 (473)
T PRK10429 85 LANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGM-TYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFT 163 (473)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHH-HHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788766665544321 14455666667677 66677778889999999 589999999987776666644443322
Q ss_pred h----h-------hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccc
Q 013312 165 R----F-------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP 233 (445)
Q Consensus 165 ~----~-------~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (445)
. . .+|+....+.+++..+..+...+..||.+++.+.+ .+.+++.
T Consensus 164 ~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~-------------------------~~~~~~~ 218 (473)
T PRK10429 164 LPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV-------------------------SAEGSHL 218 (473)
T ss_pred HHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccc-------------------------cccccCC
Confidence 1 1 24566666666665555555555566643221110 0011223
Q ss_pred hhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcch
Q 013312 234 SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 313 (445)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (445)
+.++.++.+++||.++.++...++..........+.+.|.+... .++...+.+.....+..+++. ++.+++.||+|+|
T Consensus 219 ~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~-~~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gkk 296 (473)
T PRK10429 219 TLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVI-GDADLFPYYLSYAGAANLVTL-ILFPRLVKSLSRR 296 (473)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEEC-CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcH
Confidence 46677777778888888888787777777766677766666543 355666777777777888877 7778999999999
Q ss_pred hHHHHHHHHHHHHHHHHHh-----cCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccC-------CccchhHHHHHHHHH
Q 013312 314 KLLSLGLFAACINMFICSI-----SWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGIS 380 (445)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~ 380 (445)
+.+..+..+..++.+.+.. ..+.+.... ..+.+++.+...+...++++|..| .+..|..+|..+...
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~ 376 (473)
T PRK10429 297 ILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVV 376 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHH
Confidence 9988777766655444332 122333333 356678888888888999998866 333466999999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 013312 381 SFANIVSPLIFSPLTALF 398 (445)
Q Consensus 381 ~~g~~i~~~~~g~l~~~~ 398 (445)
.++..+++.+.|.+.+..
T Consensus 377 K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 377 KGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999999999999999876
No 105
>PRK09848 glucuronide transporter; Provisional
Probab=99.93 E-value=1.7e-23 Score=200.53 Aligned_cols=345 Identities=12% Similarity=0.008 Sum_probs=232.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccccc----CchhHh-HHHH
Q 013312 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY----GRKAML-TLPL 88 (445)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~----Grr~~l-~~~~ 88 (445)
.+..+...+...+..+.++.|.++ ..+++..+.|.+.++..+..++..|+.|+++||. ||||.+ ..+.
T Consensus 14 g~g~~~~~~~~~~~~~~l~~y~~~-------~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~ 86 (448)
T PRK09848 14 SLGDVANNFAFAMGALFLLSYYTD-------VAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGT 86 (448)
T ss_pred ccchHHhHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHH
Confidence 345556677777777888877764 4477788999999999999999999999999996 777755 5555
Q ss_pred HHHHHHHHHHHhhc-Cc---chhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCc-cchhhHHHHHHHH-----Hhhhhh
Q 013312 89 TLSIIPLAILAYRR-SI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLGV-----LSASFV 158 (445)
Q Consensus 89 ~~~~~~~~~~~~~~-~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~-----~~~g~~ 158 (445)
+...+...+....+ .. ...+..++...+.++ +.+...+...++..+..++ +||.+..+.-... ..++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~ 165 (448)
T PRK09848 87 APLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGL-CYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFL 165 (448)
T ss_pred HHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHH-HHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54444444432222 10 113334555566777 6677777777777776654 6788876665543 234556
Q ss_pred hhhhhhhhhc------hhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCccccccccc
Q 013312 159 CGTLAARFLS------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (445)
Q Consensus 159 ~g~~l~~~~~------w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (445)
++|.++...+ |.....+.+++..+..++.....||+++++.+ +
T Consensus 166 ~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~-------------------------------~ 214 (448)
T PRK09848 166 IGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA-------------------------------Q 214 (448)
T ss_pred HHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc-------------------------------C
Confidence 6676665432 11111222223333333333344544221111 0
Q ss_pred chhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 013312 233 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE 312 (445)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (445)
.+.++.++.++++|.++...+..++............|.|.++.+|.++...++......+..+++. +..+++.||+++
T Consensus 215 ~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~r~g~ 293 (448)
T PRK09848 215 PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASA-PLVPGMVARIGK 293 (448)
T ss_pred CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCc
Confidence 1234445557788888888877777777777777788888888888776654444444455566666 777899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcC--CchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCc-------cchhHHHHHHHHHHH
Q 013312 313 AKLLSLGLFAACINMFICSISW--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPN-------EQGKAQGCISGISSF 382 (445)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~ 382 (445)
|+.+..+..+..++.+.+.+.+ +.+.... ..+.+++.+...+...+..+|..|.+ ++|...|+.+....+
T Consensus 294 ~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl 373 (448)
T PRK09848 294 KNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC 373 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH
Confidence 9999999888888777666644 3343333 35678888888899999988887654 459999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 013312 383 ANIVSPLIFSPLTALF 398 (445)
Q Consensus 383 g~~i~~~~~g~l~~~~ 398 (445)
|..+++.+.|.+.+..
T Consensus 374 g~aig~~i~g~~l~~~ 389 (448)
T PRK09848 374 GQAIGGSIPAFILGLS 389 (448)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999999998875
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.93 E-value=3.6e-23 Score=196.93 Aligned_cols=324 Identities=15% Similarity=0.125 Sum_probs=253.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccccc----ccCchhHhH-HHHHHHHHHHHHHHhh-c-Ccc---hhHHHHHH
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKAMLT-LPLTLSIIPLAILAYR-R-SIS---FFYAYYAL 113 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~~l~-~~~~~~~~~~~~~~~~-~-~~~---~~~~l~~~ 113 (445)
+..++++...|.+..+..+..++..|+.|.++| |+||||.++ ++....+++..++... | +.+ ...++.+.
T Consensus 30 ~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~ 109 (428)
T PF13347_consen 30 DVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVF 109 (428)
T ss_pred HHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHH
Confidence 445788899999999999999999999999999 899877655 6778888888877766 4 211 13445677
Q ss_pred HHHhhhccchhHHHHHHHHHhcCCC-ccchhhHHHHHHHHHhhhhhhhhhhhh----hh-------chhhHHHHHHHHHH
Q 013312 114 RTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAAR----FL-------STTSAFQAATIVSM 181 (445)
Q Consensus 114 r~l~G~~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~----~~-------~w~~~f~~~~~~~~ 181 (445)
.++..+ +.........++..|..+ ++||.+..+.-+....+|..+...+.. .+ +|++...+.+++.+
T Consensus 110 ~~l~~~-~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~ 188 (428)
T PF13347_consen 110 YILFDI-AYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL 188 (428)
T ss_pred HHHHHH-hhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence 777787 777777788999999998 578999999988888888754433322 21 58888888888888
Q ss_pred HHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhh
Q 013312 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLS 261 (445)
Q Consensus 182 i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (445)
+..++..+..||++++.++ ++++.+.++.++..+++|.++.++...++....
T Consensus 189 v~~~i~~~~~ke~~~~~~~----------------------------~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~ 240 (428)
T PF13347_consen 189 VFFLITFFFVKERSVEVTE----------------------------QEKKISLRDSLRSLFRNRPFRILLLAFFLQWLA 240 (428)
T ss_pred HHhhhhhheeeeccccccc----------------------------cccccccccchhhhcccchHHHHHHHHHHHHhh
Confidence 8888887888882221111 111123445555677888888888888888888
Q ss_pred hhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC--CchhH
Q 013312 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW--SAWVP 339 (445)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 339 (445)
........+.|.++..|.+ ...+.+.....+..+++. ++.++++||+|+|+....+..+..++.+.+.+.+ +.+..
T Consensus 241 ~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~-~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (428)
T PF13347_consen 241 FALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGS-PLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLV 318 (428)
T ss_pred hhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHH-HHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHH
Confidence 8888888999999988877 455777777888888877 7779999999999999999999999888877765 55555
Q ss_pred HH-HHHHHhhhhhhhhhHHHHHhcccCC-------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 340 YA-TTAFSVLVVFATPSFRSIVSKQVGP-------NEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 340 ~~-~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+. ..+.+++.+.......++.+|..+. ++.|..+|+.+....++..+++.+.|.+.+..
T Consensus 319 ~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 319 LILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred HHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 55 4777999999999999999988863 44699999999999999999999999998876
No 107
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.92 E-value=5e-23 Score=196.69 Aligned_cols=392 Identities=12% Similarity=0.039 Sum_probs=253.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccC-----chhHhH
Q 013312 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-----RKAMLT 85 (445)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~ 85 (445)
..+....+..++. ++....++.+++ ++++++..+++...+...++..+-.+ +|+++||++ ||+.++
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~-------~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~ 99 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLT-------DDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLV 99 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHH-------HhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHH
Confidence 3444445566666 555555666654 44577888898999999999998555 999999997 677777
Q ss_pred HHHHHH-HHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHH---HHHHHHHhhhhhhhh
Q 013312 86 LPLTLS-IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAF---GILLGVLSASFVCGT 161 (445)
Q Consensus 86 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~---~~~~~~~~~g~~~g~ 161 (445)
++.++. ++.....+..++ ......+..++.++ +.+...++..++..|..+ |++.... +......++|.++|+
T Consensus 100 ~~~~l~~~~~~~~l~~~~~--~~~~~~~~~~l~~~-~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~ 175 (468)
T TIGR00788 100 LSGLLGSAILYGLLPGKVS--SAKVAAAFIFLAAL-AKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISS 175 (468)
T ss_pred HHHHHHHHHHHHhcccccc--hHHHHHHHHHHHHH-HHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHH
Confidence 777665 344333333344 13344447889998 888999999999999998 5544432 233333446777777
Q ss_pred hhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccc-cccccchhH
Q 013312 162 LAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIP-VCKKIPSIR 236 (445)
Q Consensus 162 ~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 236 (445)
.+++. ++|+..|++.+.+.++. .....++||++....++.+.+. .......... ....++..+
T Consensus 176 ~l~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 243 (468)
T TIGR00788 176 LLGGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPRIGTYL-----------EMNMALLTLGVLANVKVQIL 243 (468)
T ss_pred HHHHHHHHhcCcchHHHHHHHHHHHH-HHHHHhcccccccccccccccc-----------hhhhhhhhhhHHHHHHHHHH
Confidence 77765 58999999988887666 4445677876421111000000 0000000000 000111233
Q ss_pred HHHHHhhcchhhHHHHHHHHH-HHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhH
Q 013312 237 DLICLLRSSVTLSQAAVVAFF-SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (445)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (445)
+.++. .++|.++..++..++ +.........++ .+..+..|+++.+.|......+++.+++. ...+++.+|++.|++
T Consensus 244 ~l~~~-l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~-~~~~~~~~~~~~r~~ 320 (468)
T TIGR00788 244 GLRGA-IQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGV-GGYDRFLKTFPYRLL 320 (468)
T ss_pred HHHHH-HhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHH-HHHHHHHhhCCHHHH
Confidence 44444 455666655554444 322222222211 13334589999999999999999999988 667888899999999
Q ss_pred HHHHHHHHHHHHHHHHhc----------CCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHH
Q 013312 316 LSLGLFAACINMFICSIS----------WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN 384 (445)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 384 (445)
+.++.++.+++....... ++.+.... ..+.+++.+........++++..|++.+|+.+++.+.+.++|.
T Consensus 321 l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~ 400 (468)
T TIGR00788 321 FGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGS 400 (468)
T ss_pred HHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHH
Confidence 999998888876554311 22222222 3666788888888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013312 385 IVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 430 (445)
Q Consensus 385 ~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (445)
.+++.++|.+.++.+.....+........++.+..++.+.+...++
T Consensus 401 ~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP 446 (468)
T TIGR00788 401 SVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLP 446 (468)
T ss_pred HHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999998853333333333334455555556666665555
No 108
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=4.9e-22 Score=185.60 Aligned_cols=373 Identities=32% Similarity=0.523 Sum_probs=278.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcch-hhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDEC-SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
...+....++..++.++..+..........+...++. ..+....+.-.....+...+.++..|.++||+|||..+....
T Consensus 20 ~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816|consen 20 MRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred hhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHH
Confidence 3455666777888887777666555544332222222 222223333333447888999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhh-ccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh
Q 013312 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAM-VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (445)
+...+..+...+... |.++ +.++ ++.+.......++++|....++|...+++.+.....+..++|.+++..
T Consensus 100 ~~~~l~~~~~~~~~~----~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~ 171 (463)
T KOG2816|consen 100 FGTILPALCLLFQGY----WFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYL 171 (463)
T ss_pred HHHHHhHHHHHHHHH----HHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999888877777662 3333 4444 223566678999999999999999999999999999999999998874
Q ss_pred ----chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhh
Q 013312 168 ----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (445)
Q Consensus 168 ----~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (445)
+.-..|.+..+..++..++..+.+||+..++++++ . ...+..+.........+..+...+ ..
T Consensus 172 ~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~-~~ 237 (463)
T KOG2816|consen 172 VKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-A------------TLRELTPGSLDSSHVADAFQSLTK-VG 237 (463)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-c------------cccccCCCcccchhhhhhhhhhcc-cC
Confidence 77889999999999999999999999876655531 0 000000001111111112222122 33
Q ss_pred cchhhHHHHHHHHHHHhhhhh-hHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGG-MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (445)
++|..+.++...++....... .....+.|++..+++++.+.+.+.+..+....+++.+..+.+.+.++.++.+..|...
T Consensus 238 ~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~ 317 (463)
T KOG2816|consen 238 PDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLS 317 (463)
T ss_pred CCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHH
Confidence 455555545555444443332 2224578888899999999999999999999999988888999999999999999999
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013312 323 ACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 402 (445)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~ 402 (445)
..+....++++++.|..+.............|...+..+..++++++|+++++...+..+...++|.+.+.++..+....
T Consensus 318 ~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~~ 397 (463)
T KOG2816|consen 318 EFLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDDL 397 (463)
T ss_pred HHHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 99999999999999999998888888899999999999999999999999999999999999999999999988775544
Q ss_pred CC
Q 013312 403 AP 404 (445)
Q Consensus 403 ~~ 404 (445)
.+
T Consensus 398 ~~ 399 (463)
T KOG2816|consen 398 PG 399 (463)
T ss_pred cc
Confidence 43
No 109
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.91 E-value=2e-21 Score=175.48 Aligned_cols=259 Identities=12% Similarity=0.095 Sum_probs=198.3
Q ss_pred hHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh--------------------
Q 013312 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-------------------- 166 (445)
Q Consensus 107 ~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-------------------- 166 (445)
++.++++-++.|. |.+...+..+.++++..++|++++.+++.+..+++|..+||.+++.
T Consensus 10 ~~~~l~~~f~~g~-G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 10 YVLFLGALFVLAS-GLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHh-hHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 8999999999999 9999999999999999999999999999999999999999999874
Q ss_pred hchhhHHHHHHHHHHHHHHHH-HHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcc
Q 013312 167 LSTTSAFQAATIVSMLAAAYM-RVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (445)
Q Consensus 167 ~~w~~~f~~~~~~~~i~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (445)
..|+++|++.+.+..+..+.. ...+||.+++++++ . .++ +. ...++ ..++
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~----------------~------~~~--~~-~~~~~----~~~~ 139 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVAR----------------V------SSG--DT-TQKTS----AFQF 139 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccc----------------c------ccc--cc-cchhh----HHhh
Confidence 258889986665544443332 22334422111100 0 000 00 00011 2345
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhh--cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (445)
|.++...+..+++.....+...|.+.|+++. +|+++.+.+...+....+.++++ ++.+++.||+++|+.+..+..+.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr-~~~~~l~~r~g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGR-FIGSAVMPMISQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHH
Confidence 6666667777777778889999999999864 69999999999999999999998 88899999999999988888877
Q ss_pred HHHHHHHHhcCCchhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 324 CINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.++.++....++.+..+...+.+++.+..+|...+...+..|+ +.+++.++. .+..+|+.+.|.+.|.+.|..
T Consensus 219 ~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~ 291 (310)
T TIGR01272 219 VLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCL 291 (310)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhc
Confidence 7776655555544444455678899999999999999988874 456777774 678899999999999999976
No 110
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.91 E-value=6.3e-21 Score=175.11 Aligned_cols=350 Identities=15% Similarity=0.083 Sum_probs=272.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccc----cCchhH-hHHHH
Q 013312 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAM-LTLPL 88 (445)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~~-l~~~~ 88 (445)
-...+...+........+..+.. |.+++++...|.+..+.-+--++..|+.|.++|| +||+|. ++.+.
T Consensus 18 g~gd~~~~~~~~~~~~yLl~fYT-------dv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ 90 (467)
T COG2211 18 GLGDFASNFAFGIVVLYLLFFYT-------DVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGA 90 (467)
T ss_pred cchhhHHHHHHHHHHHHHHHHHh-------cccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHh
Confidence 34445555555666666666654 5678999999999999999999999999999995 788655 55677
Q ss_pred HHHHHHHHHHHhhcCcc---hhHHHHHHHHHhhhccchhHHHHHHHHHhcCCC-ccchhhHHHHHHHHHhhhhhhh----
Q 013312 89 TLSIIPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCG---- 160 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g---- 160 (445)
+..++.+.++..+++.+ .....++...+.++ +.........++.+|..+ ++||.+..++-+...++|..+.
T Consensus 91 ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l-~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~ 169 (467)
T COG2211 91 IPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGL-GYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLF 169 (467)
T ss_pred HHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHH-HHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999998888532 15666777888888 777777788899999986 5899999999999888886553
Q ss_pred -hhhhh------hhchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccc
Q 013312 161 -TLAAR------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP 233 (445)
Q Consensus 161 -~~l~~------~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (445)
|++.. ..||+..-.+.+++..+..+.+++..+|.+.+..+. +.+.+.
T Consensus 170 ~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~--------------------------~~~~~~ 223 (467)
T COG2211 170 PPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPT--------------------------KTGVKL 223 (467)
T ss_pred HHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccC--------------------------cccccc
Confidence 33322 247788778888888888888888888876533321 011223
Q ss_pred hhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcch
Q 013312 234 SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 313 (445)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (445)
++++.+...++||.++..++..++...+.....+....|.+...|.++..............+++. +..+++.+|+|+|
T Consensus 224 ~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~-~~~p~L~~~~gkk 302 (467)
T COG2211 224 KLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGL-ILWPRLVKKFGKK 302 (467)
T ss_pred cHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhchH
Confidence 556556667788888888888888888888888888899988888888887777777777766656 7779999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcC--CchhHHHH-HHHHhhhhhhhhhHHHHHhcccC-------CccchhHHHHHHHHHHHH
Q 013312 314 KLLSLGLFAACINMFICSISW--SAWVPYAT-TAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFA 383 (445)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g 383 (445)
++...+.++..++.+.+.+.+ +.+..++. ++.+++.+...+..+++++|.++ .+..|...|.......+|
T Consensus 303 ~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g 382 (467)
T COG2211 303 KLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLG 382 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 999999999999988888776 33344443 66789999999999999988765 344589999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 013312 384 NIVSPLIFSPLTALF 398 (445)
Q Consensus 384 ~~i~~~~~g~l~~~~ 398 (445)
.+++..+.|++.+..
T Consensus 383 ~ala~~~~g~~L~~~ 397 (467)
T COG2211 383 LALAGFIPGWILGAI 397 (467)
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999999987
No 111
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.90 E-value=2.1e-20 Score=176.28 Aligned_cols=378 Identities=10% Similarity=0.029 Sum_probs=227.5
Q ss_pred hhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccccc-CchhH
Q 013312 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAM 83 (445)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~ 83 (445)
+.++.++.++...+...++.......+|.|+.+ +++.+..+.+.+.+.+.....++.+++|+++||+ ||||+
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~-------~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ 78 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTN-------QLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA 78 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH
Confidence 345677788888888888888888999999864 3466677889999999999999999999999999 99999
Q ss_pred hHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCcc--chhhHHHHHHHHHhhhhhhhh
Q 013312 84 LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSASFVCGT 161 (445)
Q Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~ 161 (445)
+.++.++.+++.++++..++. ...+++...+..+ +.|...+...++++|.+|++ +|.+++++.....++|..++|
T Consensus 79 iliG~il~~lg~lll~~~~~~--~~~~~l~l~li~i-G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap 155 (493)
T PRK15462 79 VMLGALLMAIGHVVLGASEIH--PSFLYLSLAIIVC-GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAP 155 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHH-hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHH
Confidence 999999999998777654321 2223333334444 44566677788999999875 688999999999999999999
Q ss_pred hhhhhh----chhhHHHHHHHHHHHHHHHHHHhccCCCCCC-C-CcCCccccchhh---------h--c-ccccCCCCCC
Q 013312 162 LAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPND-D-DDDLTRPIITEE---------T--E-GVNQNESNSP 223 (445)
Q Consensus 162 ~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~-~-~~~~~~~~~~~~---------~--~-~~~~~~~~~~ 223 (445)
.+.+.+ ||++.|.+.++..++..+.. ...++..++. . ++++.++..... . . ........++
T Consensus 156 ~l~g~L~~~~Gw~~~F~iaaigm~l~li~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (493)
T PRK15462 156 IACGYAQEEYSWAMGFGLAAVGMIAGLVIF-LCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKE 234 (493)
T ss_pred HHHHHHHhhhChHHHHHHHHHHHHHHHHHH-HHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988874 89999998765443333332 2222111110 0 000000000000 0 0 0000000000
Q ss_pred cccccccc--cch---hHHHH-HHh--hcchhh---HHHHHHHHHHHhhhhhhHHHHHHHHHhhc-----CCchhhHHHH
Q 013312 224 VKIPVCKK--IPS---IRDLI-CLL--RSSVTL---SQAAVVAFFSGLSEGGMQASFLYFLKAQF-----HFNKNQFADL 287 (445)
Q Consensus 224 ~~~~~~~~--~~~---~~~~~-~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~g~~ 287 (445)
......-. ... +.... +.. ..++++ ..+.+...+.+..+....+-+..|.++.. |++- ..+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~i-p~~~~ 313 (493)
T PRK15462 235 WSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTV-PTAMF 313 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceee-CHHHH
Confidence 00000000 000 00000 000 011222 22333333444444444556666776643 3221 24667
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcc--hh-----HHHHHHHHHHHHHHHHHhc----C-----C-chhHHHHHHHHhhhh
Q 013312 288 MLIAGLAGTISQLLFMPLLAPILGE--AK-----LLSLGLFAACINMFICSIS----W-----S-AWVPYATTAFSVLVV 350 (445)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~----~-----~-~~~~~~~~~~g~~~~ 350 (445)
.+.+.+..++.+ ++..++-.|..+ |. =...|+++.+++++.+.+. . + .|.+....+.++|.-
T Consensus 314 qslNp~~ii~l~-P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl 392 (493)
T PRK15462 314 QSINAFAVMLCG-VFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL 392 (493)
T ss_pred HhHhHHHHHHHH-HHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHH
Confidence 788888887777 444555444422 11 2567777788887666531 1 2 233333477789999
Q ss_pred hhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 351 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
...|...+.+++..|++.+|+.+|...... ..+++.+.|.+.+..
T Consensus 393 ~~sPvgls~~~~laP~~~~g~~mg~w~l~~---~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 393 FIDPVAMSQITRIEIPGVTGVLTGIYMLLS---GAIANYLAGVIADQT 437 (493)
T ss_pred HHChHHHHHHHHhChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHh
Confidence 999999999999999999999999885432 234444445554443
No 112
>PRK11462 putative transporter; Provisional
Probab=99.90 E-value=5.3e-20 Score=175.86 Aligned_cols=343 Identities=11% Similarity=0.012 Sum_probs=228.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccc----cCchhHhH-HHHH
Q 013312 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAMLT-LPLT 89 (445)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~~l~-~~~~ 89 (445)
++.+...+...+....+..+.. +..++++...|.+..+.-+--++..|+.|.++|| +||||.++ ++..
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt-------~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i 88 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYT-------DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGAL 88 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHH-------HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHH
Confidence 3344444555555555666654 4558888999999999999999999999999995 68876655 5667
Q ss_pred HHHHHHHHHHhhcCcc---hhHHHHHHHHHhhhccchhHHHHHHHHHhcCCC-ccchhhHHHHHHHHHhhhhhhhhhhhh
Q 013312 90 LSIIPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAAR 165 (445)
Q Consensus 90 ~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (445)
..+++..++...|+.+ ...++.+.-.+..+ +.........++.+|..+ +|||++..++......+|..+++.+..
T Consensus 89 ~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~-~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~ 167 (460)
T PRK11462 89 PFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTL-LYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMM 167 (460)
T ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788777766665321 13455666666677 667777788899999987 689999999999988888766654432
Q ss_pred ----hh-------chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccch
Q 013312 166 ----FL-------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 234 (445)
Q Consensus 166 ----~~-------~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (445)
.+ +|+....+.+++.+++..++....||.++++++ +.+
T Consensus 168 plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~-------------------------------~~~ 216 (460)
T PRK11462 168 PLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPT-------------------------------TTS 216 (460)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCcc-------------------------------CCC
Confidence 12 466666666666555555554445553221110 112
Q ss_pred hHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchh
Q 013312 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (445)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (445)
.++.++...+||.++.++...++..............|.+...|. +...+.+.....+..+++. ++.+++.||+++|+
T Consensus 217 ~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~-~l~~~l~~r~gkk~ 294 (460)
T PRK11462 217 MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGS-ALAKPLTDWKCKVT 294 (460)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHH
Confidence 455556677788777766666666666555555566666655553 3344566677778888877 78899999999998
Q ss_pred HHHHHHHHHHHHHHHHHhcCCc--hhHH-HHHHHHhhhhhhhhhHHHHHhcccC-------CccchhHHHHHHHHHHHHH
Q 013312 315 LLSLGLFAACINMFICSISWSA--WVPY-ATTAFSVLVVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFAN 384 (445)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~ 384 (445)
....+.....+....+.+.++. +... ..++.+++.+...+...++..|..+ .+..|...+..+....+|.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~ 374 (460)
T PRK11462 295 IFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGL 374 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHH
Confidence 8765544433333333332222 1222 2345566666666777777777665 3334666788889999999
Q ss_pred HHHHHHHHHHHHhh
Q 013312 385 IVSPLIFSPLTALF 398 (445)
Q Consensus 385 ~i~~~~~g~l~~~~ 398 (445)
.+++.+.|.+.+..
T Consensus 375 alg~~i~g~iL~~~ 388 (460)
T PRK11462 375 AFGGALIGWMLAYG 388 (460)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999875
No 113
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.89 E-value=2.6e-19 Score=159.93 Aligned_cols=359 Identities=14% Similarity=0.092 Sum_probs=260.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccccccC-----chhHhHH-HHHHHHHHHHHHHhh-----c-------Cc-
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-----RKAMLTL-PLTLSIIPLAILAYR-----R-------SI- 104 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~-~~~~~~~~~~~~~~~-----~-------~~- 104 (445)
.|++++....+.+.+...+... ..+.+|+.||+.+ ||..+++ +....+.+..+..++ . +.
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 5668888888998888877765 6999999999999 8877665 555555555554432 2 11
Q ss_pred chhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh----ch-hh--HHHHHH
Q 013312 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----ST-TS--AFQAAT 177 (445)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w-~~--~f~~~~ 177 (445)
...........+.|+ +.+...++..++++|..|||+|+++.++...+.-+|.+++..+.+.+ +. |. .+...+
T Consensus 87 ~g~~~a~l~F~l~G~-G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 87 LGLALAALAFLLYGL-GVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHHHHHh-hHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 012345566778888 77888889999999999999999999999999999999998888764 11 22 222222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHH
Q 013312 178 IVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFF 257 (445)
Q Consensus 178 ~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (445)
++.+...++..+ -.|++.++.. +.+.+++.++++.++.+..+|.....+...++
T Consensus 166 ~i~~~l~~ia~w-g~E~r~~~~~-------------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l 219 (403)
T PF03209_consen 166 LIALLLNLIALW-GQEPRRSRRA-------------------------AAAERPRPPFREAWRQVWASPQARRFFVFLFL 219 (403)
T ss_pred HHHHHHHHHHHH-hcccCCcccc-------------------------cCCCCCCccHHHHHHHHHhCCChhHHHHHHHH
Confidence 222222222222 2222211111 01122334566767777788888888888888
Q ss_pred HHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhh-hhhcchhHHHHHHHHHHHHHHHHHhc---
Q 013312 258 SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLA-PILGEAKLLSLGLFAACINMFICSIS--- 333 (445)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~--- 333 (445)
..+++..-+..+-+|-.+++|++..+...+....+.+..++. ...+++. +|.++++....++....+++..+..+
T Consensus 220 ~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~-~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~ 298 (403)
T PF03209_consen 220 GTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGM-LLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL 298 (403)
T ss_pred HHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888889999999999999999999999999999988877 5556554 47888888888888888777665543
Q ss_pred CCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccchh
Q 013312 334 WSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG--APFNFPGF 410 (445)
Q Consensus 334 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~--~~~~~~~~ 410 (445)
.+.+.+.. .+++|++.+.......+...+..++++.|..+|.....+.++..++..+.|.+.|...... .+...++.
T Consensus 299 ~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~ 378 (403)
T PF03209_consen 299 GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGV 378 (403)
T ss_pred ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHH
Confidence 35666655 4888999999999999999999999999999999999999999999999999998753221 13334445
Q ss_pred HHHHHHHHHHHHHHHHHhccC
Q 013312 411 SIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~ 431 (445)
.|.+-++..++++.....+.+
T Consensus 379 VF~lEa~ll~~a~~ll~~l~~ 399 (403)
T PF03209_consen 379 VFALEAVLLLAALVLLGRLDR 399 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 566666666666666655544
No 114
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.8e-22 Score=168.42 Aligned_cols=360 Identities=12% Similarity=0.063 Sum_probs=246.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccccc-cCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccc
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 122 (445)
.+.++...+..++.+.|+....+...+.|++.|| +|-|..-++-.....++.++++...-.+.+|.+..+|++.|+ |+
T Consensus 72 ~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGI-Gg 150 (459)
T KOG4686|consen 72 LDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGI-GG 150 (459)
T ss_pred cccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeecc-Cc
Confidence 4446666678899999999999999999999996 688877776677777787777654333339999999999999 54
Q ss_pred hhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhh----hhhhhhhc-------hh--hHHHHHHHHHHHHHHHHHH
Q 013312 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCG----TLAARFLS-------TT--SAFQAATIVSMLAAAYMRV 189 (445)
Q Consensus 123 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g----~~l~~~~~-------w~--~~f~~~~~~~~i~~~~~~~ 189 (445)
-..-.+-+.+...|++.||.+.++|+.....-+|..+- |.+....+ .. .............-+.+..
T Consensus 151 ESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical 230 (459)
T KOG4686|consen 151 ESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICAL 230 (459)
T ss_pred hhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44446888999999999999999999999888887653 33332211 10 0111111111111111111
Q ss_pred hccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHH
Q 013312 190 FLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASF 269 (445)
Q Consensus 190 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (445)
.+--..+..++ ..+++ ++...+. .+....++ -.+.+|.+.+..+++......+...-
T Consensus 231 ~lg~~D~rAer------ilh~e---~g~~Ge~--------pkLtdv~~------f~ppfw~~~iicv~yyva~fPFi~lg 287 (459)
T KOG4686|consen 231 SLGLSDDRAER------ILHLE---EGFLGEE--------PKLTDVNT------FYPPFWVLVIICVLYYVAWFPFITLG 287 (459)
T ss_pred HhhhhhhHHHH------HHhhh---cCcccCC--------cccccccc------cCccHHHHHHHHHHHHHHHHHHhhhh
Confidence 11111111110 00000 0000000 00001111 13557788888888888888899999
Q ss_pred HHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH-HHHHHHHHHHHHhcCCchhHHH-HHHHHh
Q 013312 270 LYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG-LFAACINMFICSISWSAWVPYA-TTAFSV 347 (445)
Q Consensus 270 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~g~ 347 (445)
|.++++++|+|+.+++.+.+.....+.+.+ .+.|.++||.|++.....+ .+....+-..+.+ +.+..+. ..+.|+
T Consensus 288 ~~fF~~rfGlS~~~a~~i~s~vy~Isav~s-pvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGL 364 (459)
T KOG4686|consen 288 PMFFQKRFGLSAVSAGNILSTVYGISAVLS-PVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGL 364 (459)
T ss_pred HHHHHHhhCCChhhccchhhhhhhhhhhhh-hhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhh
Confidence 999999999999999999988888888877 7779999999987655443 3333444333333 2233333 466788
Q ss_pred hhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHH
Q 013312 348 LVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 427 (445)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (445)
..+......+..++..+|+++.|++.|..+.++++|-.+.|.+.|.+.|.-+++ .+....++..+.+.+......+
T Consensus 365 sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y----~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 365 SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSY----DNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCch----hhHHHHHHHHHHHHHHHHHHHh
Confidence 888888888888999999999999999999999999999999999999875333 3445567777788888888888
Q ss_pred hccCCCC
Q 013312 428 MMSHTPA 434 (445)
Q Consensus 428 ~~~~~~~ 434 (445)
.+.+++.
T Consensus 441 ~~N~kq~ 447 (459)
T KOG4686|consen 441 YLNKKQS 447 (459)
T ss_pred heecccc
Confidence 7777654
No 115
>PTZ00207 hypothetical protein; Provisional
Probab=99.89 E-value=1.5e-19 Score=173.37 Aligned_cols=376 Identities=12% Similarity=0.058 Sum_probs=247.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhh------cCcchhHHHHHHHHHh
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR------RSISFFYAYYALRTLT 117 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~r~l~ 117 (445)
++++.+..+.+++.++. .....++++.|+++||+|||+++.++.++.++++++++++ ++ ++.+.+.|++.
T Consensus 55 ~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s---~~~l~l~r~l~ 130 (591)
T PTZ00207 55 ARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS---VVRLSVYNGLM 130 (591)
T ss_pred HHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc---HHHHHHHHHHH
Confidence 34566667777777763 3445677789999999999999999999999999999997 46 89999999999
Q ss_pred hhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhh-hhhhhhhh--chhhHHHHHHHHHHHHHHHHHHhccCC
Q 013312 118 AMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC-GTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDD 194 (445)
Q Consensus 118 G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~l~~~~--~w~~~f~~~~~~~~i~~~~~~~~~~e~ 194 (445)
|+ +.+...+.....+.+++| ++||++.|+.....++|.++ +++..+.+ +|+..|++.+++.++..++...+++++
T Consensus 131 G~-G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 131 TL-GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLP 208 (591)
T ss_pred HH-HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCC
Confidence 99 888888888999999997 78999999999999999975 55555554 788889888888888777777777665
Q ss_pred CCCCC--Cc---CCcccc------------------c--------------------hh----------------h----
Q 013312 195 VPNDD--DD---DLTRPI------------------I--------------------TE----------------E---- 211 (445)
Q Consensus 195 ~~~~~--~~---~~~~~~------------------~--------------------~~----------------~---- 211 (445)
+.+.. ++ ++.++. . +. .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll 288 (591)
T PTZ00207 209 PFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTV 288 (591)
T ss_pred cchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 43211 00 111111 0 00 0
Q ss_pred -----------hcccccC-C-C--CCCc---------ccc-----ccc-ccchhHHHHHHhhcchhhHHHHHHHHHHHhh
Q 013312 212 -----------TEGVNQN-E-S--NSPV---------KIP-----VCK-KIPSIRDLICLLRSSVTLSQAAVVAFFSGLS 261 (445)
Q Consensus 212 -----------~~~~~~~-~-~--~~~~---------~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (445)
.+..+++ + + ..+. .+. ..+ ..+...+.+....++..+|.+++..++....
T Consensus 289 ~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~ 368 (591)
T PTZ00207 289 IFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGA 368 (591)
T ss_pred HHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCc
Confidence 0000000 0 0 0000 000 000 0011111222234567788888888887777
Q ss_pred hhhhHHHHHHHHHhhcCCch-hh-HHHHHHHHHHHHHHHHHHHHHHhhh----hhc----chh-HHHHHHHHHHHHHHHH
Q 013312 262 EGGMQASFLYFLKAQFHFNK-NQ-FADLMLIAGLAGTISQLLFMPLLAP----ILG----EAK-LLSLGLFAACINMFIC 330 (445)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~-~~-~g~~~~~~~~~~~~~~~~~~~~l~~----~~~----~~~-~~~~~~~~~~~~~~~~ 330 (445)
...+...+....+..-|.+. .+ ...+.+..++.+.+|. +..|.+.. |.. +|. .+.+..+ +.++.+++
T Consensus 369 gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GR-l~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll 446 (591)
T PTZ00207 369 HFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGR-LCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTL 446 (591)
T ss_pred hheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhH-HHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHH
Confidence 66667777777766326622 32 2226788888888888 77677662 221 122 2333444 55666666
Q ss_pred HhcCC-chhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHH-HHHHHHHHHhhhcCCCC---c
Q 013312 331 SISWS-AWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS-PLIFSPLTALFLSKGAP---F 405 (445)
Q Consensus 331 ~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~-~~~~g~l~~~~~~~~~~---~ 405 (445)
++..+ ..+....++.|++.|..++.....++|.+. ++-|+-.-+.....-+|..+- -.++|.++|+-...... .
T Consensus 447 ~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~ 525 (591)
T PTZ00207 447 FLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCT 525 (591)
T ss_pred HHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeC
Confidence 65544 333444588899999999999999999999 888998888888887777776 56888899875322211 1
Q ss_pred ccc--hhHHHHHHHHHHHHHHHHHh
Q 013312 406 NFP--GFSIMCIGLASMVAFIQSLM 428 (445)
Q Consensus 406 ~~~--~~~~~~~~~~~~~~~~~~~~ 428 (445)
+.. ..++++.++++..+.+....
T Consensus 526 G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 526 ERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred CceeeHhHHHHHHHHHHHHHHHHhh
Confidence 111 23567777777777666543
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.88 E-value=8.3e-21 Score=174.64 Aligned_cols=362 Identities=17% Similarity=0.214 Sum_probs=251.7
Q ss_pred hHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCc-hhHh
Q 013312 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAML 84 (445)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l 84 (445)
.+|.+++..+..++..+..+++.|..-.|.++ -|.+.+....|++.++..++.+++++.+|.++.|.++ |+.+
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~------lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl 105 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQK------LDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL 105 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhh------cCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH
Confidence 36788888999999999999999999999876 2234455788999999999999999999999999998 8899
Q ss_pred HHHHHHHHHHHHHH-HhhcCcc-hhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhh
Q 013312 85 TLPLTLSIIPLAIL-AYRRSIS-FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (445)
Q Consensus 85 ~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 162 (445)
+.+.++..+++++. ++..-.+ ..+.++++|++.|+ |.+.. ....+|+++....++|.|+++..+.+..+|.++||.
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gv-g~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGV-GVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-CcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 99999999999998 4432222 37899999999999 76666 578999999999999999999999999999999998
Q ss_pred hhhhh------c-----------hhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcc
Q 013312 163 AARFL------S-----------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVK 225 (445)
Q Consensus 163 l~~~~------~-----------w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (445)
++..+ | +..+-|+.+++.++..++..+.++|.++...+++..++ +++ +...
T Consensus 184 ~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~-----------~~~-~~~~ 251 (488)
T KOG2325|consen 184 IQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV-----------EEE-KSDI 251 (488)
T ss_pred HHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccc-----------hhh-ccch
Confidence 87653 1 13566788888888888888899998765544311100 000 0000
Q ss_pred cccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhH----HHHHHHHHHHHHHHHHH
Q 013312 226 IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQF----ADLMLIAGLAGTISQLL 301 (445)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----g~~~~~~~~~~~~~~~~ 301 (445)
++.+.. + - +.+..+..++..+...+......+..+.+....++++.++. |...+..++..+... +
T Consensus 252 ~~~~~~--~-~-------d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~-l 320 (488)
T KOG2325|consen 252 EKVKKP--K-L-------DWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILL-L 320 (488)
T ss_pred hhhccC--C-h-------hHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHH-H
Confidence 000000 0 1 11223344555566666666667777777777788877664 344444444444433 2
Q ss_pred HHHHhh-hhhcchhHHHHHHHHHHHHHHHHHhc----C---------------------------CchhHHH--HHHHHh
Q 013312 302 FMPLLA-PILGEAKLLSLGLFAACINMFICSIS----W---------------------------SAWVPYA--TTAFSV 347 (445)
Q Consensus 302 ~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------------------------~~~~~~~--~~~~g~ 347 (445)
...... .++.+|+.+..+.+.......+.... . +.+..+. .+++|.
T Consensus 321 ~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~ 400 (488)
T KOG2325|consen 321 LYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGI 400 (488)
T ss_pred HHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheecc
Confidence 222222 23344555555544433333332210 0 0111122 244566
Q ss_pred hhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 348 LVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+.........+.-+|...|+++++.+|+.+.....+..++|.+...++...
T Consensus 401 ~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~ 451 (488)
T KOG2325|consen 401 AFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS 451 (488)
T ss_pred ccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc
Confidence 666677788889999999999999999999999999999999999998876
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.77 E-value=8.9e-17 Score=146.59 Aligned_cols=373 Identities=13% Similarity=0.063 Sum_probs=242.7
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccccc-CchhHhH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLT 85 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~ 85 (445)
.|.++.++...+-..++++-....+..|++....++ ++.+..+..-+.++|..-.-+...++|+++||+ |+|+.+.
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g---Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG---LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc---CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 567888889999999998888888888888755332 667777777778888877778899999999996 9999999
Q ss_pred HHHHHHHHHHHHHHhhc--CcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCcc--chhhHHHHHHHHHhhhhhhhh
Q 013312 86 LPLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSASFVCGT 161 (445)
Q Consensus 86 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~ 161 (445)
.+.++.++|.++.+... + ...++++-.+.++ |.|..-|...+++.|.+|++ +|...++++.++.++|..++|
T Consensus 97 lGail~~iGh~~L~~~~~~~---~~gl~i~L~~I~i-G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p 172 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSG---PGGLYIGLALIIV-GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAP 172 (498)
T ss_pred HHHHHHHHHHHHHhcccccc---ccHHHHHHHHHHh-ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHH
Confidence 99999999999999985 5 7788889999999 89999999999999999864 477789999999999999999
Q ss_pred hhhhhh----chhhHHHHHHHHHHHHHHHHHHhccCCCCCC----CCcC-Cccccchhh---------h---cccccCCC
Q 013312 162 LAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPND----DDDD-LTRPIITEE---------T---EGVNQNES 220 (445)
Q Consensus 162 ~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~----~~~~-~~~~~~~~~---------~---~~~~~~~~ 220 (445)
.+.+++ +|+..|...++-..+.++..+ ..+...... +... +........ . .....+..
T Consensus 173 ~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 251 (498)
T COG3104 173 IITGLLAINYGWHVGFGLAAVGMIIGLVIFL-LGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTF 251 (498)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH-HccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888774 899999888876555544443 333211111 1100 000000000 0 00000000
Q ss_pred CCCc-------c----cccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCc----hhhHH
Q 013312 221 NSPV-------K----IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN----KNQFA 285 (445)
Q Consensus 221 ~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~g 285 (445)
.... . ....+..+...+ -+|-.....+.+...+++..+....+.+..|..+..+.+ +...+
T Consensus 252 ~~~~~~~~i~~~~~~~~~~~~~~~~~~e----r~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~ 327 (498)
T COG3104 252 SGVLLVISILIAIIYFAEAFRSPKVFDE----RRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPA 327 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccHHH----HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHH
Confidence 0000 0 000000000011 000011222333333444444444555666665533322 12346
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcch-------hHHHHHHHHHHHHHHHHHhc-------C---CchhHHH-HHHHHh
Q 013312 286 DLMLIAGLAGTISQLLFMPLLAPILGEA-------KLLSLGLFAACINMFICSIS-------W---SAWVPYA-TTAFSV 347 (445)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~-~~~~g~ 347 (445)
+..+...+..++.+ ++..++..|.+++ .-...++.++..+++++... . +.+..+. .++.++
T Consensus 328 ~fQslNp~~Iii~~-pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~ 406 (498)
T COG3104 328 WFQSLNPFFIILFS-PILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSF 406 (498)
T ss_pred HHHhhCHHHHHHHH-HHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 77788888877777 4445666664332 13445666666666555443 1 2333444 477799
Q ss_pred hhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 013312 348 LVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (445)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 392 (445)
+.-...|...+++.+..|+...+..++........++.++..+.+
T Consensus 407 gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 407 GELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 999999999999999999999999999888888888887777666
No 118
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.76 E-value=3.3e-16 Score=140.42 Aligned_cols=324 Identities=13% Similarity=0.001 Sum_probs=225.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCc---chhH--HHHHHHHHhhhccch
Q 013312 49 AIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI---SFFY--AYYALRTLTAMVCEG 123 (445)
Q Consensus 49 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---~~~~--~l~~~r~l~G~~~~g 123 (445)
+....-|+.-+|.+.+....+++-|+.||+|-|...+++.....+|..+-..+... +.++ ....+..+.+. +.-
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~-Aq~ 155 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA-AQP 155 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH-hhh
Confidence 33456688889999999999999999999999999999999999999988776543 2244 77788888887 666
Q ss_pred hHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh----------chhh--HHHHHHHHHHHHHHHHHHhc
Q 013312 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----------STTS--AFQAATIVSMLAAAYMRVFL 191 (445)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----------~w~~--~f~~~~~~~~i~~~~~~~~~ 191 (445)
.....-..+..-|++++||..+..+-.++..+|.++|-++...+ .|.. .|+....+..+.+++..+..
T Consensus 156 Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~ 235 (480)
T KOG2563|consen 156 FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVF 235 (480)
T ss_pred HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66655567788999999999999888887777777665554332 3433 45555555555555555555
Q ss_pred cCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHH
Q 013312 192 KDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLY 271 (445)
Q Consensus 192 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (445)
++.|+.+.... .......++.+..+..++++++..+.+........++...+.+..
T Consensus 236 ~~~P~tPps~s------------------------~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~ 291 (480)
T KOG2563|consen 236 TKKPPTPPSAS------------------------QAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNL 291 (480)
T ss_pred CCCCCCCCchh------------------------HhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhh
Confidence 55443322210 000011234455555778888877766666666566666555554
Q ss_pred HHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc-hhHHHHHHHHHHHHHH-HHHhcC---Cch-hHHHHHHH
Q 013312 272 FLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAACINMF-ICSISW---SAW-VPYATTAF 345 (445)
Q Consensus 272 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~---~~~-~~~~~~~~ 345 (445)
-+.. -|++....|+......+.+++++ .+.|.+.||.++ |....+......++.. +..... +.+ ......++
T Consensus 292 ~l~~-sgY~~~~aG~ig~l~iv~Gmlga-~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~ 369 (480)
T KOG2563|consen 292 ALCP-SGYEGVFAGYIGALMIVAGMLGA-LASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLL 369 (480)
T ss_pred cccc-ccCCccccchhHHHHHHHHHHHH-HHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHH
Confidence 4444 47777888999999999999998 888999999876 4444444444444422 222211 223 33335778
Q ss_pred HhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013312 346 SVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (445)
Q Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 399 (445)
|.+.....|...-+..|..-|..-++..|+.+..+++-+.+-..+.+...+...
T Consensus 370 g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 370 GFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred HHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccC
Confidence 888888899888888888877888999999999999888888888888777653
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.73 E-value=3e-19 Score=171.32 Aligned_cols=374 Identities=16% Similarity=0.218 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHH
Q 013312 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP 94 (445)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 94 (445)
+..++..+..+.....++.+ +..++++..+.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.+++
T Consensus 10 ~~~~~q~~~~g~~~~~ltti--------ErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g 81 (539)
T PF03137_consen 10 LLGLFQMMVSGYVNSSLTTI--------ERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLG 81 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHH--------HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHH
Confidence 33334444444444444444 3677999999999999999999999999999999988888888999999999
Q ss_pred HHHHHhh----cC-------------------------------------------cchhHHHHHHHHHhhhccchhHHH
Q 013312 95 LAILAYR----RS-------------------------------------------ISFFYAYYALRTLTAMVCEGSINC 127 (445)
Q Consensus 95 ~~~~~~~----~~-------------------------------------------~~~~~~l~~~r~l~G~~~~g~~~~ 127 (445)
++++++- +. ...++.++++.++.|+ |+...++
T Consensus 82 ~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~Gi-G~~pl~t 160 (539)
T PF03137_consen 82 SLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGI-GATPLYT 160 (539)
T ss_dssp ----------------------------------------------------------------------SS-S------
T ss_pred HHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhc-cccCCcc
Confidence 8887641 00 0016788999999999 9999999
Q ss_pred HHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh--------------------------chhhHHHHHHHHHH
Q 013312 128 LALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--------------------------STTSAFQAATIVSM 181 (445)
Q Consensus 128 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~--------------------------~w~~~f~~~~~~~~ 181 (445)
...+|+=|.+++++-+..+|++.....+|.++|-++++.+ .|...|++.+.+.+
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~ 240 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLF 240 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988887652 24555667776666
Q ss_pred HHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCC-cccccccccchhHHHHHHhhcchhhHHHHHHHHHHHh
Q 013312 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSP-VKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGL 260 (445)
Q Consensus 182 i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (445)
+..+.. +..|+..++.++.++.++..++..++.++++..++ ..+...+..+.+....+.+.+||.+....+.......
T Consensus 241 l~aipl-~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~ 319 (539)
T PF03137_consen 241 LSAIPL-FFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESF 319 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH-HcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 655554 44554433331111111111101111001100000 0000111112233334456788988888888888888
Q ss_pred hhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc--hhHHHHHHHHHHHHHHH---HHhc--
Q 013312 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE--AKLLSLGLFAACINMFI---CSIS-- 333 (445)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~---~~~~-- 333 (445)
...++.++.|.|++.+++.++.+++++.....+.....+.+++|++.+|++. |..+....+...++.+. ..+.
T Consensus 320 ~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C 399 (539)
T PF03137_consen 320 IVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGC 399 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecC
Confidence 9999999999999999999999999988877776666666899999998753 44444444443333322 1110
Q ss_pred ----------CC--------------------------------------chhHH-HH-HHHHhhhhhhhhhHHHHHhcc
Q 013312 334 ----------WS--------------------------------------AWVPY-AT-TAFSVLVVFATPSFRSIVSKQ 363 (445)
Q Consensus 334 ----------~~--------------------------------------~~~~~-~~-~~~g~~~~~~~~~~~~~~~~~ 363 (445)
+. ....+ .. ++..+..+..........-+.
T Consensus 400 ~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~ 479 (539)
T PF03137_consen 400 PNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRC 479 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeecc
Confidence 00 00111 11 222334444555556667789
Q ss_pred cCCccchhHHHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 013312 364 VGPNEQGKAQGCISGISS-FANIVSPLIFSPLTALF 398 (445)
Q Consensus 364 ~~~~~~g~~~g~~~~~~~-~g~~i~~~~~g~l~~~~ 398 (445)
+|+++|+.+.|+...+.+ +|.+-+|.++|.+.|..
T Consensus 480 V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 480 VPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ------------------------------------
T ss_pred CChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 999999999999988775 57788999999999963
No 120
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.68 E-value=3.3e-14 Score=134.32 Aligned_cols=372 Identities=15% Similarity=0.163 Sum_probs=230.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccccccc-----CchhHhHHHHHHHHHHHHHHHhhcCc-chhHHHHHHHHHh
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLT 117 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~ 117 (445)
+++++++.+.....+...++.. .-|++|.++|-+ .||+-++++.++.+++...++..++. .......+.-++.
T Consensus 18 ~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la 96 (433)
T PF03092_consen 18 DDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLA 96 (433)
T ss_pred HHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHH
Confidence 4456777777777777777655 478899999976 35555666777776666666654431 1155556666777
Q ss_pred hhccchhHHHHHHHHHhcCCCc--cchhhHHHHHHHHHhhhhhhhhhhhhhh----chhhHHHHHHHHHHHHHHHHHHhc
Q 013312 118 AMVCEGSINCLALAYVADNISE--RQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFL 191 (445)
Q Consensus 118 G~~~~g~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~ 191 (445)
.+ +.........+++.|...+ ++|+...+.......+|.+++..++|.+ +++..|.+.+++..+..+...+..
T Consensus 97 ~~-g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~ 175 (433)
T PF03092_consen 97 SF-GYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLL 175 (433)
T ss_pred HH-HHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhh
Confidence 77 7888889999999999853 4477888888888888988888877764 778889888888777766666666
Q ss_pred cCCCCCCCCcCCccccchhhhcccccCCCCCCccccccc-ccchhHHHHHHhhcchhhHHHHH-HHHHHHhhhhhhHHHH
Q 013312 192 KDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCK-KIPSIRDLICLLRSSVTLSQAAV-VAFFSGLSEGGMQASF 269 (445)
Q Consensus 192 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 269 (445)
+| +++.++++.. ...++ + .+.... .++..++.++.+ +.|.++...+ ..++............
T Consensus 176 ~e-~~~~~~~~~~-----------~~~~~--~-~~~~~~~~~~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~~~~~a~~ 239 (433)
T PF03092_consen 176 EE-RKVRPADEVF-----------SFGKE--E-VPCLFGSFREQLSELWRAL-QQRAIWQPILFFIFFFNLPPSISSASS 239 (433)
T ss_pred hh-ccccccchhh-----------ccccc--c-cchhhHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHhccCCCCccE
Confidence 66 2211111000 00000 0 000000 122334444433 3454554444 2322222222111101
Q ss_pred HHHHHhhcC---CchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHh----------cCCc
Q 013312 270 LYFLKAQFH---FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI----------SWSA 336 (445)
Q Consensus 270 ~~~~~~~~g---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 336 (445)
-.+..+..+ +|+...+.+..+..++.+++. .+..+...+..-|+++....++..+..+.-.. .++.
T Consensus 240 fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~-~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~ 318 (433)
T PF03092_consen 240 FYFQTDALGGPHFSPSFYGTLSIVGSIASLLGI-LLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQ 318 (433)
T ss_pred EEEEeccccccccCHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCe
Confidence 112233345 899888888877777777776 44455555566777777666655544332111 1122
Q ss_pred hhHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHH
Q 013312 337 WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCI 415 (445)
Q Consensus 337 ~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 415 (445)
+.... ..+..+.....+-....+.+|..|+...|+.+++...+.++|..++..++..+.+.++-.+..+.......++.
T Consensus 319 ~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~ 398 (433)
T PF03092_consen 319 WFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILIC 398 (433)
T ss_pred EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHH
Confidence 22222 25556666666777778899999999999999999999999999999999999888754344443344445666
Q ss_pred HHHHHHHHHHHHhccCCCC
Q 013312 416 GLASMVAFIQSLMMSHTPA 434 (445)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~ 434 (445)
.++.++.+.+...++++.+
T Consensus 399 ~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 399 SVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHHHHHHcCCCch
Confidence 6666777777767776544
No 121
>PRK10054 putative transporter; Provisional
Probab=99.64 E-value=1.8e-14 Score=135.57 Aligned_cols=151 Identities=11% Similarity=0.102 Sum_probs=129.5
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 013312 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (445)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (445)
+|.++.+.+..++...+......++|.|+++++|+|+.+.|+..+...+...+.+ +..|+++||+|+|+.+..+..+..
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~-~~~G~l~Dr~g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFS-LGFGILADKFDKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCcchhHHHHHHHHH
Confidence 3446667777888888888889999999988899999999999999999999988 778999999999999999998888
Q ss_pred HHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 325 INMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
++.+.+.+.++.+..+.. .+.+.+.+...+...++..|..|+++|+++.|+.+...++|..++|.+.+.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 85 SGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887776655543 445556666678888999999999999999999999999999999999998875
No 122
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.62 E-value=6.4e-13 Score=117.40 Aligned_cols=271 Identities=11% Similarity=0.058 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHH
Q 013312 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (445)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 93 (445)
+....+...+..+..|.+-.+. ++.+.+..+++.+....+...++..++.|.++||+|||+.-+...+++++
T Consensus 40 l~vY~La~~aDWLQGpY~Y~LY--------~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~ 111 (354)
T PF05631_consen 40 LLVYLLAMAADWLQGPYLYALY--------ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSL 111 (354)
T ss_pred HHHHHHHHHHHHhhcchhHHHH--------HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 4444555666677777554333 33466678899999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHh-cC----CCccchhhHHHHHH-HHHhhhhhhhhhhhhh-
Q 013312 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVA-DN----ISERQRASAFGILL-GVLSASFVCGTLAARF- 166 (445)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~-~~----~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~- 166 (445)
+++ +-..++ ++.++++|++.|+ +......+-.++.. |. +|++..+.-++... ...++-.+.+.+++..
T Consensus 112 scl-~k~~~~---~~~L~~GRvlgGi-aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 112 SCL-TKHSSN---YPVLLLGRVLGGI-ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHH-HHhccc---cHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 885 445577 9999999999999 88888777777664 22 23333344444333 2222223333444433
Q ss_pred ---h--chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHH
Q 013312 167 ---L--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (445)
Q Consensus 167 ---~--~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (445)
. |-..+|.....+..+..++....-+|+..+..++ .+..+..++..+.
T Consensus 187 ~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~---------------------------~~~~~~~~~a~~~ 239 (354)
T PF05631_consen 187 ADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSS---------------------------SSLSGSFREAWRA 239 (354)
T ss_pred HHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccc---------------------------cchHHHHHHHHHH
Confidence 3 3478999988887777777666666654432221 0111244566667
Q ss_pred hhcchhhHHHHHHHHHHHhhhhhhHH-HHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHh-hhhhcchhHHHHH
Q 013312 242 LRSSVTLSQAAVVAFFSGLSEGGMQA-SFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLL-APILGEAKLLSLG 319 (445)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~ 319 (445)
++++|+++.+.++..+.-...+.+.. |-|..-.+ + +..-.|++++......++|+ .+.+++ .++......+...
T Consensus 240 i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~--~-~~~P~GlIFssFM~a~MlGS-~lf~~l~s~~~~~e~~l~~v 315 (354)
T PF05631_consen 240 ILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD--D-EELPLGLIFSSFMVAMMLGS-SLFSRLLSKSLRPESLLRYV 315 (354)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC--C-CCCCchHHHHHHHHHHHHHH-HHHHHHHhCCCCHHHHHHHH
Confidence 78888888887777777766666533 44443311 1 22346999999999999999 554444 4454444555544
Q ss_pred HHHHHHHHH
Q 013312 320 LFAACINMF 328 (445)
Q Consensus 320 ~~~~~~~~~ 328 (445)
..+.++++.
T Consensus 316 ~~~aa~~l~ 324 (354)
T PF05631_consen 316 FAVAAVSLA 324 (354)
T ss_pred HHHHHHHHH
Confidence 444444443
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.60 E-value=4e-14 Score=134.08 Aligned_cols=188 Identities=12% Similarity=0.064 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHH
Q 013312 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (445)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 90 (445)
+.+.+..++............|.+.++.-.......+.+....|...++..+...++.++.|+++||+|||+++..+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~ 290 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVA 290 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34445555555555555566677776521000000123456779999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc-CcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHH-HHHhhhhhhhhhhhhhh-
Q 013312 91 SIIPLAILAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARFL- 167 (445)
Q Consensus 91 ~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~~- 167 (445)
.+++..+..... +...++.+++.+++.|+ +.+...+....++.|.+|+++|++++++.+ ...++|..+||.+++.+
T Consensus 291 ~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~-~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~ 369 (418)
T TIGR00889 291 WALRFGFFAYGDPEYFGYALLFLSMIVYGC-AFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMV 369 (418)
T ss_pred HHHHHHHHHHcCcchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 988877777643 21114567788999999 778888888999999999999999999997 67889999999988752
Q ss_pred ---------chhhHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 013312 168 ---------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (445)
Q Consensus 168 ---------~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~ 199 (445)
||+..|.+.+++.++..++..+++||+.+..+
T Consensus 370 ~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~ 410 (418)
T TIGR00889 370 EKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAIK 410 (418)
T ss_pred HHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 48999999988888888888888888754433
No 124
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.60 E-value=3.5e-14 Score=136.62 Aligned_cols=347 Identities=16% Similarity=0.203 Sum_probs=249.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhh------------------cCc-
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR------------------RSI- 104 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~- 104 (445)
..++++..+.|++.+.+-++..+...+..+..-|..|-|.+-++.++.+++.+++++- .+.
T Consensus 125 rRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~ 204 (735)
T KOG3626|consen 125 RRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPS 204 (735)
T ss_pred hhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCc
Confidence 5667778889999999999999999999999999999999999999999999988752 000
Q ss_pred --------------------------c----hhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHh
Q 013312 105 --------------------------S----FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLS 154 (445)
Q Consensus 105 --------------------------~----~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 154 (445)
. .+..++++.++.|+ |....++...+|+=|...+++-+..+|++.....
T Consensus 205 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GI-G~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~ 283 (735)
T KOG3626|consen 205 SSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGI-GATPIFTLGISYIDDNVKKKNSPLYLGILYSMAI 283 (735)
T ss_pred cccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhc-CCCCCccCCCccccccccccCCcHHHHHHHHHHH
Confidence 0 14478889999999 8899999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhh-----------------------chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhh
Q 013312 155 ASFVCGTLAARFL-----------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEE 211 (445)
Q Consensus 155 ~g~~~g~~l~~~~-----------------------~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 211 (445)
+|.++|-++++++ .|+..|++.+.+.++..+.. +++|...++..++.+.+ .
T Consensus 284 lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~-f~fPk~lp~~~~~~~~~-----~ 357 (735)
T KOG3626|consen 284 LGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL-FFFPKELPKSQKRKRAR-----D 357 (735)
T ss_pred hhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH-HhCcccCccccccchhh-----h
Confidence 9999998888762 35566888888877776665 55665544333220000 0
Q ss_pred hcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHH
Q 013312 212 TEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA 291 (445)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 291 (445)
.+..+.+.+..+......+..+.+....+.+.+||.+....+...+......++.+++|-|++.++|.++..+..+....
T Consensus 358 ~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i 437 (735)
T KOG3626|consen 358 LHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSI 437 (735)
T ss_pred hcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhh
Confidence 00000000000001111111123333445567899999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHhhhhhcc--hhHHHHHHHHHHHHHHHH---Hh----------------------c-C---------
Q 013312 292 GLAGTISQLLFMPLLAPILGE--AKLLSLGLFAACINMFIC---SI----------------------S-W--------- 334 (445)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~---~~----------------------~-~--------- 334 (445)
++.....+.+++|++.+|++. |......++...+.++.+ .+ . .
T Consensus 438 ~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~ 517 (735)
T KOG3626|consen 438 GVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSD 517 (735)
T ss_pred hhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcC
Confidence 888888787999999998753 555544444444443331 11 0 0
Q ss_pred ---------------------------------C------------c------------------h----hHHHHHHH-H
Q 013312 335 ---------------------------------S------------A------------------W----VPYATTAF-S 346 (445)
Q Consensus 335 ---------------------------------~------------~------------------~----~~~~~~~~-g 346 (445)
+ . . .+++..++ .
T Consensus 518 C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~s 597 (735)
T KOG3626|consen 518 CSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGS 597 (735)
T ss_pred CCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHH
Confidence 0 0 0 01111122 2
Q ss_pred hhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHH-HHHHHHHHHHHHHHHh
Q 013312 347 VLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS-FANIVSPLIFSPLTAL 397 (445)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~i~~~~~g~l~~~ 397 (445)
+..+...+..+.++.+.+|+|+|.-++|+..++.+ +|.+-+|.++|++.|.
T Consensus 598 f~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 598 FIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 33344456666777889999999999999988876 5778899999999996
No 125
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.59 E-value=9.3e-14 Score=133.47 Aligned_cols=154 Identities=15% Similarity=0.105 Sum_probs=134.2
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhh--cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchhHHHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGL 320 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~ 320 (445)
+++.++.++...++..+++++...++|.|+++. +|+++.+.+...+.......++. +.+|+++|| +|||+.+..+.
T Consensus 8 ~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~-~~~G~laDr~~G~~~~l~~~~ 86 (475)
T TIGR00924 8 HPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLT-SVGWWFGDRVWGTKKTMVLGG 86 (475)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHhhcchHHHHHHHH
Confidence 345566677777888889999999999999887 89999999999999999999988 888999999 89999999999
Q ss_pred HHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCcc---chhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 321 FAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE---QGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
.+..++.+.+.+.++.+.+.. ..+.+++.+...|...+++.+.+|+++ |+++.++.+...++|..+||.+.|++.+
T Consensus 87 ~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 87 IVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred HHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888776655544 366788888889999999999998764 8889999999999999999999999988
Q ss_pred hh
Q 013312 397 LF 398 (445)
Q Consensus 397 ~~ 398 (445)
+.
T Consensus 167 ~~ 168 (475)
T TIGR00924 167 NY 168 (475)
T ss_pred hc
Confidence 65
No 126
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.59 E-value=5.7e-15 Score=117.59 Aligned_cols=132 Identities=22% Similarity=0.317 Sum_probs=116.5
Q ss_pred HHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCC
Q 013312 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (445)
Q Consensus 58 s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~ 137 (445)
+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++ ++.+.+.+++.|+ +.+...+...+++.|..
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN---ITVLIIARFLQGF-GAAFALVAGAALIADIY 80 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHhHHHHHHHHC
Confidence 4457788899999999999999999999999999999998888888 8999999999999 88888899999999999
Q ss_pred CccchhhHHHHHHHHHhhhhhhhhhhhhhh----chhhHHHHHHHHHHHHHHHHHHhccC
Q 013312 138 SERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKD 193 (445)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~~e 193 (445)
|+++|++..+..+....+|..++|.+++.+ +|++.|++.+.+.++..+...+..||
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999888764 78999998888877776666666665
No 127
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.59 E-value=1.4e-13 Score=129.75 Aligned_cols=146 Identities=12% Similarity=0.096 Sum_probs=129.6
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHH
Q 013312 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (445)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (445)
.++...++...+.+....++|.|+++++|+|+.+.|+..+...+...+.+ ++.|+++||+++|+.+..+..+..++.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~-~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLG-IFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-hhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 35667778888888889999999988899999999999999999988887 77799999999999999999999999998
Q ss_pred HHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 330 CSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 330 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
+.+.++.|.++.. .+.+++.+...|...+++.|.+|+|+|+++.|+.+...++|..+||.+.|.+.+
T Consensus 93 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~ 160 (400)
T PRK11646 93 MAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ 160 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877766554 666888888888999999999999999999999999999999999999999984
No 128
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.59 E-value=7.5e-12 Score=113.83 Aligned_cols=324 Identities=13% Similarity=0.058 Sum_probs=211.9
Q ss_pred HHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCC
Q 013312 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (445)
Q Consensus 58 s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~ 137 (445)
-...-.++...++...+.|..+.|++++.+.+...+...+..+.++ ...+.+..+..|+ +.+.. .+..+++-...
T Consensus 48 Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~s---v~~mq~~q~~yg~-~~a~e-vay~sYiys~v 122 (412)
T PF01770_consen 48 PVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTS---VLAMQLMQFFYGL-ATAAE-VAYYSYIYSVV 122 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCc---HHHHHHHHHHHHH-HHHHH-HHHHHHheeec
Confidence 3345566777788899999999999999999999999999999999 9999999999999 65554 68889999999
Q ss_pred CccchhhHHHHHHHHHhhhhhhhhhhhhhh------chhhHHHHHHHHHHHHHHHHHHhccCCCCCC---CCcCCccccc
Q 013312 138 SERQRASAFGILLGVLSASFVCGTLAARFL------STTSAFQAATIVSMLAAAYMRVFLKDDVPND---DDDDLTRPII 208 (445)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~------~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~---~~~~~~~~~~ 208 (445)
|+++-.++.+...++..+|..+|.++|..+ +.+...++......++.++ .+++|..++.. ++..+.+...
T Consensus 123 ~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~-~~fLP~~~~S~~f~r~~~~~~~~~ 201 (412)
T PF01770_consen 123 DKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLI-ALFLPMPKRSLFFHRKPPAEQDAN 201 (412)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHcCCCCcccceeccCccccccc
Confidence 999999999999999999999998888764 4456666665544444444 36677755421 1111100000
Q ss_pred hhhhcc-cccCC----CCCCcccccccccchhHHHHH---HhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhh--cC
Q 013312 209 TEETEG-VNQNE----SNSPVKIPVCKKIPSIRDLIC---LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FH 278 (445)
Q Consensus 209 ~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g 278 (445)
+...+. ++.++ ..++...........++..++ ...++|.++...+-..+...+.....++.....++. -+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~ 281 (412)
T PF01770_consen 202 ESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSD 281 (412)
T ss_pred cccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCC
Confidence 000000 00000 000111111111122233332 233566665555545555555555566666655553 13
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchh--HHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhh
Q 013312 279 FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK--LLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPS 355 (445)
Q Consensus 279 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~ 355 (445)
-+....|..-+...+.+.++. +..|++..++.+.. .+.....+.+..++++...++.|..+.. ++++.......+.
T Consensus 282 ~~~vYNG~VeA~~tllgA~~a-l~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTi 360 (412)
T PF01770_consen 282 NESVYNGAVEAASTLLGAIAA-LLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITI 360 (412)
T ss_pred CCcccchHHHHHHHHHHHHHH-HHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445777888888888877 67788755555533 3334445556667777788888888886 6667777777788
Q ss_pred HHHHHhcccCCccchhHHHHHHHHHHHHHHHHH
Q 013312 356 FRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 388 (445)
Q Consensus 356 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~ 388 (445)
...-++.....|.-|-++|+++.+..+-+.+-.
T Consensus 361 A~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT 393 (412)
T PF01770_consen 361 ASFQIAKNLSEERYALVFGINTFVALVLQTILT 393 (412)
T ss_pred HHHHHHHhccccceeeeeeeHHHHHHHHHHheE
Confidence 888888888888889999988887766555443
No 129
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.57 E-value=2.9e-13 Score=129.24 Aligned_cols=148 Identities=11% Similarity=0.128 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHH
Q 013312 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (445)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (445)
...++..++..+....+....|.+.++ +|+|+.+.|++.+...++..+++ +..|++.||+|+|+.+..+.++..++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~g~r~~~~~~~~~~~~~~~ 103 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSK-FVSGIVSDRSNARYFMGIGLIATGIINI 103 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHH-hhhhHHHhhcCCchhHHHHHHHHHHHHH
Confidence 334444444444445667778888876 89999999999999999999998 7889999999999999999999999998
Q ss_pred HHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 329 ICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 329 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
...+.++.+.+... ++.+++.+...+...+++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..
T Consensus 104 ~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 104 LFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 88888877766554 56678888888899999999999999999999999999999999999999998765
No 130
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.57 E-value=1.7e-13 Score=127.35 Aligned_cols=165 Identities=19% Similarity=0.319 Sum_probs=131.6
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHH
Q 013312 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICS 331 (445)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (445)
++..++...........+|.++.+++|.|+.+.+++.+...+...++. +..|++.||+|||+.+..+..+..++.+...
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFS-PFAGYLSDRFGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHH-HHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCeeeEeehhhhhhhHHHHhh
Confidence 345556666666677777856667799999999999999999999998 7779999999999999999999999855555
Q ss_pred hcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchh
Q 013312 332 ISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGF 410 (445)
Q Consensus 332 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~ 410 (445)
+.++.+.++.. ++.|++.+...+...+++.|.+|+++|+++++..+....+|..++|.+.+.+.+.. ++..
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-------~~~~- 152 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-------GWRW- 152 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-------HHCC-
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-------cccc-
Confidence 55666644444 77899999999999999999999999999999999999999999999999998654 2222
Q ss_pred HHHHHHHHHHHHHHH
Q 013312 411 SIMCIGLASMVAFIQ 425 (445)
Q Consensus 411 ~~~~~~~~~~~~~~~ 425 (445)
.+.+.+++.++..+.
T Consensus 153 ~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 153 AFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhh
Confidence 355566666655553
No 131
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.56 E-value=2.7e-13 Score=127.68 Aligned_cols=169 Identities=12% Similarity=0.087 Sum_probs=132.8
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHH
Q 013312 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (445)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (445)
.....+.............|.+.++ +|.|+.+.++..+...++..++. +..|++.||+|||+.+..+..+..++.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQ-LLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 3333444444555555666766655 89999999999999999999998 788999999999999999999999988888
Q ss_pred HhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccch
Q 013312 331 SISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPG 409 (445)
Q Consensus 331 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~ 409 (445)
.+.++.+..... .+.+++.+...+...+++.|.+|+++|+++.|..+....++..++|.+.+.+.++. ++..
T Consensus 88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------~~~~ 160 (385)
T TIGR00710 88 ALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-------SWHA 160 (385)
T ss_pred HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CHHH
Confidence 888877766654 67788899899999999999999999999999999999999999999999988864 3333
Q ss_pred hHHHHHHHHHHHHHHHHHhc
Q 013312 410 FSIMCIGLASMVAFIQSLMM 429 (445)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~ 429 (445)
.+.+.+++.++.....+..
T Consensus 161 -~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 161 -IFAFLSLAGILLSALIFFI 179 (385)
T ss_pred -HHHHHHHHHHHHHHHHHHh
Confidence 2444444444444444433
No 132
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.56 E-value=2.4e-13 Score=126.94 Aligned_cols=169 Identities=13% Similarity=0.111 Sum_probs=135.5
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHH
Q 013312 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (445)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (445)
+....++..+........+|.|..+ .+.++.+.++..+...++..++. +..|+++||+|||+.+..+..+..++....
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~-~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLS-PIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHH-HhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 4556677777777788888998887 69999999999999999999998 777999999999999999888877777666
Q ss_pred HhcC-----CchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 013312 331 SISW-----SAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAP 404 (445)
Q Consensus 331 ~~~~-----~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~ 404 (445)
.+.. +.+.++.. .+.+++.+...+...+++.|..|+++|+++.|..+....+|..++|.+.+.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------ 155 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL------ 155 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 6655 66655554 66788888899999999999999999999999999999999999999999998875
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhc
Q 013312 405 FNFPGFSIMCIGLASMVAFIQSLMM 429 (445)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (445)
++.. .+.+.++..+++.......
T Consensus 156 -g~~~-~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 156 -GIKW-AIWVDAVGFAISALLIVSV 178 (365)
T ss_pred -hHHH-HHHHHHHHHHHHHHHHHhc
Confidence 3333 2444444444444444433
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=99.55 E-value=4.7e-13 Score=126.11 Aligned_cols=153 Identities=11% Similarity=0.143 Sum_probs=124.3
Q ss_pred HHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HH
Q 013312 266 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TA 344 (445)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 344 (445)
...+|.+.++ +|.|+.+.|+..+...++..+++ +..|++.||+|||+++..+..+..++.+...+.++.+.+... .+
T Consensus 29 ~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 106 (390)
T PRK03545 29 VGLLSDIAQS-FHMQTAQVGLMLTIYAWVVALMS-LPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIG 106 (390)
T ss_pred HcchHHHHhH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3345665554 89999999999999999988888 666899999999999999999999999888888888877665 66
Q ss_pred HHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHH
Q 013312 345 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFI 424 (445)
Q Consensus 345 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (445)
.|++.+...+...+++.|..|+|+|++++|+......+|..++|.+.+.+.++. ++.. .+.+.+++.++...
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-------gw~~-~f~~~~~~~~l~~~ 178 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-------GWRT-TFLAIGGGALITLL 178 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-------cHHH-HHHHHHHHHHHHHH
Confidence 788888888999999999999999999999999999999999999999988765 3333 34555554444444
Q ss_pred HHHh
Q 013312 425 QSLM 428 (445)
Q Consensus 425 ~~~~ 428 (445)
....
T Consensus 179 ~~~~ 182 (390)
T PRK03545 179 LLIK 182 (390)
T ss_pred HHHH
Confidence 4333
No 134
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.55 E-value=3.4e-13 Score=130.77 Aligned_cols=167 Identities=14% Similarity=0.100 Sum_probs=115.6
Q ss_pred HHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHH-H
Q 013312 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI-L 98 (445)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~-~ 98 (445)
...........+|.+.++. .+.+....++..+...++..++.+..|+++||+|||+++..+.++..++... .
T Consensus 262 ~~~~~~~~~~~~p~~l~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 334 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHN-------LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAF 334 (490)
T ss_pred HHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 3344555566778887542 2333345566777888999999999999999999999988877654433322 2
Q ss_pred --HhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh-----chhh
Q 013312 99 --AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTS 171 (445)
Q Consensus 99 --~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~-----~w~~ 171 (445)
..+++ ...+++.+++.|+ +.+...+....++.|.+|++.|+++++.......++..++|.+.+.+ +|+.
T Consensus 335 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~ 410 (490)
T PRK10642 335 ILINSNV---IGLIFAGLLMLAV-ILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMM 410 (490)
T ss_pred HHHhCCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchH
Confidence 22344 6777888999888 66666667788889999999999999975444445556777766653 4677
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCC
Q 013312 172 AFQAATIVSMLAAAYMRVFLKDDVPND 198 (445)
Q Consensus 172 ~f~~~~~~~~i~~~~~~~~~~e~~~~~ 198 (445)
+++...+.+++..+.. +++||++++.
T Consensus 411 ~~~~~~~~~~i~~~~~-~~~pes~~~~ 436 (490)
T PRK10642 411 PAYYLMVVAVIGLITG-VTMKETANRP 436 (490)
T ss_pred HHHHHHHHHHHHHHHH-HHhccccCCC
Confidence 7666666655554443 5679987753
No 135
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.55 E-value=5.2e-13 Score=126.51 Aligned_cols=175 Identities=11% Similarity=0.147 Sum_probs=135.1
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-cchhHHHHHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLSLGLFA 322 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 322 (445)
+++.++..+...+...+.++++..++|.|+++.+|+++.+.+.+.........++. +.+|+++||+ |||+.+..+.++
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~-ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTP-ILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCcHHHHHHHHHH
Confidence 34556667777778888899999999999998899999999999998888888877 8889999999 999999999999
Q ss_pred HHHHHHHHHhcCC-chhHHH-HHHHHhhhhhhhhhHHHHHhcccCCc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 323 ACINMFICSISWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPN--EQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 323 ~~~~~~~~~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
..++.+++....+ ...... ..+..++.+...+...+++.|.+|++ +|.+++++.....++|+.++|.+.|++.+..
T Consensus 86 ~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~ 165 (493)
T PRK15462 86 MAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY 165 (493)
T ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9888776654332 222222 23445666667787888999999876 6999999999999999999999999998865
Q ss_pred hcCCCCcccchhHHHHHHHHHHHHHHHHH
Q 013312 399 LSKGAPFNFPGFSIMCIGLASMVAFIQSL 427 (445)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (445)
++... |.+.++..+++++...
T Consensus 166 -------Gw~~~-F~iaaigm~l~li~~~ 186 (493)
T PRK15462 166 -------SWAMG-FGLAAVGMIAGLVIFL 186 (493)
T ss_pred -------ChHHH-HHHHHHHHHHHHHHHH
Confidence 33333 4444444444444443
No 136
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.55 E-value=8.8e-13 Score=124.13 Aligned_cols=153 Identities=11% Similarity=0.065 Sum_probs=126.8
Q ss_pred hhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-
Q 013312 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT- 342 (445)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 342 (445)
.....+|.+.++ +|+++.+.++..+...++..+++ +..|++.||+|||+.+..+..+..++.+...+.++.+.++..
T Consensus 38 ~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 115 (394)
T PRK10213 38 LPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFAS-LFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR 115 (394)
T ss_pred HHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence 444567777665 89999999999999999999988 777899999999999999999999998888888888777775
Q ss_pred HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHH
Q 013312 343 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVA 422 (445)
Q Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (445)
.+.|++.+...+...+++.|.+|+++|+++.++.....+++..++|.+.+.+.+.+ ++... +.+.+.+.++.
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-------gw~~~-f~~~~~l~~~~ 187 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-------GWRNV-FNAAAVMGVLC 187 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CHHHH-HHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999998865 33333 44444444444
Q ss_pred HHHH
Q 013312 423 FIQS 426 (445)
Q Consensus 423 ~~~~ 426 (445)
....
T Consensus 188 ~l~~ 191 (394)
T PRK10213 188 IFWI 191 (394)
T ss_pred HHHH
Confidence 4333
No 137
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.54 E-value=3.3e-13 Score=128.34 Aligned_cols=182 Identities=13% Similarity=0.068 Sum_probs=138.4
Q ss_pred HHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 013312 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (445)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (445)
+.++++|.++..++..++..+.........|.+.++ .+.++.+.|+..+...+...+++ +..|+++||++||+.+..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~-~~~G~l~dr~g~~~~l~~~ 88 (417)
T PRK10489 11 SLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGL-MVGGVLADRYDRKKLILLA 88 (417)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHH-HhhHHHhhhcCCceEEEeh
Confidence 445667778777777788888877778888888877 57899999999999999999998 7789999999999988877
Q ss_pred HHHHHHHHHHHHh-----cCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 013312 320 LFAACINMFICSI-----SWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (445)
Q Consensus 320 ~~~~~~~~~~~~~-----~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 393 (445)
..+.+++...+.. .++.+.+... ++.+++.+...+...+.+.|.+|+++|+++.++.+...++|..+||.+.|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~ 168 (417)
T PRK10489 89 RGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGL 168 (417)
T ss_pred HHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHH
Confidence 7766665544332 2334444433 556777777788889999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 394 LTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
+.+.. ++.. .+.+.++..+++.+..+..++
T Consensus 169 l~~~~-------~~~~-~~~~~~~~~~~~~~~~~~l~~ 198 (417)
T PRK10489 169 LIAAG-------GVAW-NYGLAAAGTFITLLPLLRLPA 198 (417)
T ss_pred HHHHH-------hhHH-HHHHHHHHHHHHHHHHHhCCC
Confidence 98865 2222 244444444454444444443
No 138
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.54 E-value=1e-12 Score=118.93 Aligned_cols=175 Identities=15% Similarity=0.117 Sum_probs=155.1
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHH
Q 013312 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (445)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (445)
.++.+.+..|......+.....+|...+| +|.|..++|...+.+..+..++. +....+.||++||+++...+.+..++
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~a-p~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGA-PLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHcccchHHHHHHHHHHHHHH
Confidence 35556777788888888889999999988 89999999999999999999999 66679999999999999999999999
Q ss_pred HHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 013312 327 MFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 405 (445)
Q Consensus 327 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 405 (445)
.++.+++++++.+.+. ++.++..+..++...+...+.+|+++|+++.++..+...++..+|.+++.++-|.+
T Consensus 92 n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~------- 164 (394)
T COG2814 92 NLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF------- 164 (394)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-------
Confidence 9999999999988887 88899999999999999999999999999999999999999999999999999987
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 406 NFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
+|-.. |.+.+.+.+++.+..+...|
T Consensus 165 GWR~~-F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 165 GWRAT-FLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hHHHH-HHHHHHHHHHHHHHHHHhCC
Confidence 55554 66666667766666665555
No 139
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.54 E-value=4.1e-13 Score=127.05 Aligned_cols=154 Identities=14% Similarity=0.046 Sum_probs=127.4
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (445)
+++++..+.+..++..+........+|.++++++|.|+.+.|+..+...++..+.+ +..|+++||+|||+++..+.+..
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~-~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSR-PHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhc-hhhHhHHhccCCcchHHHHHHHH
Confidence 44566667778888888888888899999988899999999999999999999998 78899999999999999988877
Q ss_pred HHHHHHHHh---cCC-----chhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 324 CINMFICSI---SWS-----AWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 324 ~~~~~~~~~---~~~-----~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 394 (445)
.++.+.... .++ .+.++.. ++.|++.+...+...++..|..|+|+|+++.++......+|..++|.+.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 666544333 222 1223333 6778888888899999999999999999999999999999999999999999
Q ss_pred HHhh
Q 013312 395 TALF 398 (445)
Q Consensus 395 ~~~~ 398 (445)
.+..
T Consensus 172 ~~~~ 175 (399)
T PRK05122 172 YHWG 175 (399)
T ss_pred HHcc
Confidence 8865
No 140
>PRK10504 putative transporter; Provisional
Probab=99.53 E-value=8.1e-13 Score=127.86 Aligned_cols=151 Identities=13% Similarity=0.038 Sum_probs=129.6
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (445)
+.++......++............|.+.++ +|.++.+.++..+...++..++. +..|+++||+|||+.+..+..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVML-PASGWLADRVGVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHHHHHHHH
Confidence 345566666777777777778889999887 89999999999988888888887 7889999999999999988888888
Q ss_pred HHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 326 NMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 326 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+.+...+.++.+.++.. .+.|++.+...|...+.+.|.+|+++|+++.|+.+...++|..++|.+.|.+.++.
T Consensus 88 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~ 161 (471)
T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA 161 (471)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc
Confidence 88777777776665554 77789999889999999999999999999999999999999999999999998864
No 141
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.53 E-value=7.8e-13 Score=124.19 Aligned_cols=171 Identities=12% Similarity=0.058 Sum_probs=139.4
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (445)
+.++......+............+|.+.++ +|.+..+.|+..+...++..+++ +..|++.||+|||+.+..+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGA-PIIALFSSRYSLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHH-HHHHHHHccCccHHHHHHHHHHHHH
Confidence 445566667777777777777888887766 89999999999999999999998 8889999999999999999999999
Q ss_pred HHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 013312 326 NMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAP 404 (445)
Q Consensus 326 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~ 404 (445)
+.+...+.++.+.++.. .+.|++.+...+.....+.|..|+++|+++++.......++..++|.+.+.+.+..
T Consensus 81 ~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------ 154 (382)
T PRK10091 81 GNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF------ 154 (382)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc------
Confidence 99999998888877765 77788888888888888999999999999999999999999999999999888754
Q ss_pred cccchhHHHHHHHHHHHHHHHH
Q 013312 405 FNFPGFSIMCIGLASMVAFIQS 426 (445)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~ 426 (445)
++.. .+.+.+++.++..+..
T Consensus 155 -gwr~-~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 155 -SWRY-TFLLIAVFNIAVLASI 174 (382)
T ss_pred -cHHH-HHHHHHHHHHHHHHHH
Confidence 3333 3455554444444333
No 142
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.53 E-value=1.2e-12 Score=123.93 Aligned_cols=134 Identities=9% Similarity=-0.029 Sum_probs=116.9
Q ss_pred hhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHH
Q 013312 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA 341 (445)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (445)
........| .+++++|+++.+.|+..+...++..+++ +..|++.||+|||+.+..+.++..++.+...+.++.+.++.
T Consensus 24 ~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (412)
T TIGR02332 24 RINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICG-IPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYL 101 (412)
T ss_pred hhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 333444444 6667799999999999999999999998 77789999999999999999999999999888888776666
Q ss_pred H-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 342 T-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 342 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
. .+.|++.+...|....++.|.+|+++|+++.|+.+....+|..+++.+.+++.+.
T Consensus 102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 102 LRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5 7789999988999999999999999999999999999999999999999988753
No 143
>PRK12382 putative transporter; Provisional
Probab=99.53 E-value=9e-13 Score=124.37 Aligned_cols=152 Identities=15% Similarity=0.072 Sum_probs=121.1
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (445)
+.++...+..++...........+|.++++++|.|+.+.|+..+...+...+.+ +..|+++||+|||+.+..+.+...+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~-~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTR-GYAGRLADQYGAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHh-hhhhHHHHhhcchHHHHHHHHHHHH
Confidence 345555556666666666677888888887799999999999999999999998 7889999999999999988777665
Q ss_pred HHHHH---Hhc-----CCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 326 NMFIC---SIS-----WSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 326 ~~~~~---~~~-----~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
+.+.. ... ++.+.+++. .+.|++.+...+...+++.|..|+|+|++++|..+.....+..++|.+.+.+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~ 173 (392)
T PRK12382 94 AGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS 173 (392)
T ss_pred HHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 54322 111 233333343 677888888888888899999999999999999999999999999999999887
Q ss_pred hh
Q 013312 397 LF 398 (445)
Q Consensus 397 ~~ 398 (445)
..
T Consensus 174 ~~ 175 (392)
T PRK12382 174 HF 175 (392)
T ss_pred cc
Confidence 64
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.52 E-value=1.1e-12 Score=123.25 Aligned_cols=150 Identities=9% Similarity=-0.006 Sum_probs=131.9
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (445)
|.++.+.+..++...........+|.+.++ +|.|+.+.|+..+...++..+++ +..|+++||+|||+.+..+..+..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~-~~~g~l~dr~g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGT-LLAGYVIKRIGFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446667777888888888889999999987 79999999999999999999998 7889999999999999999999999
Q ss_pred HHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 326 NMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 326 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
+.....+.++.+.+... ++.|++.+...+.......+..++++|+++++..+...++|..+||.+.+.+.+.
T Consensus 84 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 84 GCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 88888888887766665 6778888888888888888888999999999999999999999999999988764
No 145
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.52 E-value=8.4e-13 Score=124.23 Aligned_cols=148 Identities=14% Similarity=0.151 Sum_probs=123.3
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (445)
|.++.+++..++..++........+...++ ++.++.+.++..+...+...+.. ++.|+++||+|||+++..+..+..+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~-~~~G~laDr~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLA-PFVGAFADSFPKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHH-hhhhHhhhccCCchhhHHHHHHHHH
Confidence 456666777777777666665666666555 78899999999999999999988 8889999999999999999988887
Q ss_pred HHHHHHhcCCchhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 326 NMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
+.+.+.+..+. ...-.+.|++.+...|...+++.|.+|+|+|++++|+.+....++..+||.++|.+.+.
T Consensus 81 ~~~~~~~~~~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 81 GCLLMLFGIHP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665555443 22336679999999999999999999999999999999999999999999999999985
No 146
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.51 E-value=6.4e-13 Score=126.13 Aligned_cols=169 Identities=20% Similarity=0.256 Sum_probs=135.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHH
Q 013312 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (445)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 96 (445)
.+..........+.+|.+.++... +.+......|.+.++..++..++.+..|+++||+|||+.+..+.....++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAG----NVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Confidence 334445555667778888776321 1122223457777888889999999999999999999999999888888887
Q ss_pred HHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh----chhhH
Q 013312 97 ILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSA 172 (445)
Q Consensus 97 ~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~----~w~~~ 172 (445)
...+.++ .+.+++.+++.|+ +.+...|...+.+.+..|+++|++.++..+....+|..+||.+++.+ +|++.
T Consensus 304 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~ 379 (408)
T PRK09874 304 PMSFVQT---PLQLGILRFLLGA-ADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAV 379 (408)
T ss_pred HHHHhcc---HHHHHHHHHHHHh-hhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHH
Confidence 7777777 7888899999999 88888899999999999999999999999999999999999998864 89999
Q ss_pred HHHHHHHHHHHHHHHHHhccC
Q 013312 173 FQAATIVSMLAAAYMRVFLKD 193 (445)
Q Consensus 173 f~~~~~~~~i~~~~~~~~~~e 193 (445)
|++.+++.++..+...+..++
T Consensus 380 f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 380 FLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999998887777666554443
No 147
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.51 E-value=1.7e-13 Score=130.49 Aligned_cols=164 Identities=12% Similarity=0.032 Sum_probs=130.2
Q ss_pred HhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCc
Q 013312 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (445)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 104 (445)
.......|.+..+.. .+.+.+..+.|++.++..+...++.++.|+++||+|||+.+..+.++.+++..+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~- 314 (420)
T PRK09528 240 DVFDQQFPNFFASFF----ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG- 314 (420)
T ss_pred HHHHHHHHHHHHHHH----hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc-
Confidence 333344666665532 122344567899999999999999999999999999999999999999999888888888
Q ss_pred chhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHH-HHHHHhhhhhhhhhhhhh----hchhhHHHHHHHH
Q 013312 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGI-LLGVLSASFVCGTLAARF----LSTTSAFQAATIV 179 (445)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~ 179 (445)
.+.+++.+++.|+ +.+...+....++.|..|++.|+...+. .+....+|.++||.+.+. .||+..|.+.+++
T Consensus 315 --~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~ 391 (420)
T PRK09528 315 --PLEVSILKLLHAF-EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGI 391 (420)
T ss_pred --HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHH
Confidence 8888899999998 7777777888999999999988887655 566778888898888876 4899999998888
Q ss_pred HHHHHHHHHHhccCCCC
Q 013312 180 SMLAAAYMRVFLKDDVP 196 (445)
Q Consensus 180 ~~i~~~~~~~~~~e~~~ 196 (445)
.++..++..+.++++++
T Consensus 392 ~~i~~~~~~~~~~~~~~ 408 (420)
T PRK09528 392 VLLFTLISVFTLSGDRE 408 (420)
T ss_pred HHHHHHHHHHHhcCCch
Confidence 77766666666665443
No 148
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.51 E-value=1.5e-12 Score=125.16 Aligned_cols=154 Identities=14% Similarity=0.075 Sum_probs=131.0
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchhHHHHHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFA 322 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 322 (445)
++|.++..+...+...+++++...+++.|+++.+|++..+.++..........+.. +.+|+++|| +|||+++..+.++
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~-~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLI-SIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-hhHHHhhhhccchHHHHHHHHHH
Confidence 34567777778888889999999999999999999999998888888777776766 688999999 9999999999999
Q ss_pred HHHHHHHHHhcCCchh-HHH-HHHHHhhhhhhhhhHHHHHhcccCCcc--chhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 323 ACINMFICSISWSAWV-PYA-TTAFSVLVVFATPSFRSIVSKQVGPNE--QGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 323 ~~~~~~~~~~~~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
..++.+.+.+..+... ++. ..+.+++.+...|...+++.|.+|+++ |++++++.....++|..++|.+.|++.++.
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~ 170 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF 170 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999988888765443 322 366688889999999999999998774 588999999999999999999999999876
No 149
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.51 E-value=1.7e-12 Score=125.94 Aligned_cols=172 Identities=15% Similarity=0.070 Sum_probs=136.6
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
+..+.+..+....-.......+|.+.++ +|.++.+.++..+.+.++..... +..|+++||+|||+.+..+..+..++.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~-~~~G~l~D~~Grk~~l~~~~~~~~~~~ 85 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMV-LPMGALGDRIGFKRLLMLGGTLFGLAS 85 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4445555666666666667778888766 89999999999999999988887 777999999999999999999999999
Q ss_pred HHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhccc-CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 013312 328 FICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQV-GPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 405 (445)
Q Consensus 328 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 405 (445)
+..++.++.+.++.. .+.|++.+...+.....+.+.+ |+++|++++|+......+|..+||.+.|.+.++.
T Consensus 86 ~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~------- 158 (495)
T PRK14995 86 LAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF------- 158 (495)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-------
Confidence 999999888877776 7788888888888877776655 7799999999999999999999999999998875
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhc
Q 013312 406 NFPGFSIMCIGLASMVAFIQSLMM 429 (445)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~ 429 (445)
++... |.+...+.++........
T Consensus 159 gwr~~-f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 159 YWGSV-FLINVPIVLVVMGLTARY 181 (495)
T ss_pred ChHHH-HHHHHHHHHHHHHHHHHh
Confidence 34433 444444444444444333
No 150
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.51 E-value=2.1e-12 Score=121.91 Aligned_cols=151 Identities=11% Similarity=0.064 Sum_probs=125.3
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (445)
|.+.......+....+.......+|.+.++ +|.++.+.++..+...++..++. +..|+++||+|||+.+..+.....+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAM-LFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhHhHHHHHhCChHHHHHHHHHHHH
Confidence 444445555566666666666778887766 79999999999999999998888 7789999999999999999999888
Q ss_pred HHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 326 NMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 326 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+.......++.+..+.. .+.|++.+...+...+++.|.+|+++|+++.+..+....++..++|.+.+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~ 154 (392)
T PRK10473 81 ASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF 154 (392)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 88888887776655554 66788888888889999999999999999999999999999999999988877653
No 151
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.51 E-value=1.7e-12 Score=129.06 Aligned_cols=131 Identities=14% Similarity=0.023 Sum_probs=113.6
Q ss_pred HHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HH
Q 013312 266 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TA 344 (445)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 344 (445)
...+|.+. +.+|.+..+.+++.+...++.+++. ++.|+++||+|||+.+..+.++..++.++..+.++.+.+++. ++
T Consensus 187 s~ilp~i~-~~~gls~~~~g~l~s~~~lG~iiG~-li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l 264 (742)
T TIGR01299 187 GFVLPSAE-KDLCIPDSGKGMLGLIVYLGMMVGA-FFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLL 264 (742)
T ss_pred HHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 33445444 4489999999999999999999998 888999999999999999999888888888888777766665 77
Q ss_pred HHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 345 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 345 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.|++.+...+...+++.|.+|++.||+..+..+....+|.++++.+...+...+
T Consensus 265 ~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~ 318 (742)
T TIGR01299 265 SGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY 318 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999999999888777653
No 152
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.50 E-value=3.8e-13 Score=120.21 Aligned_cols=169 Identities=11% Similarity=0.091 Sum_probs=134.9
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHH
Q 013312 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (445)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (445)
..+.+..+.+.--.+....|...++ .++|.++.|.+.+...+..-++. ++.|.++||.++|+.+..++++.++..+++
T Consensus 34 ~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sK-f~~G~~sDr~npr~fm~~gLilsai~nil~ 111 (448)
T COG2271 34 IFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSK-FVMGVLSDRSNPRYFMAFGLILSAIVNILF 111 (448)
T ss_pred HHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHH-HHhhhhcccCCCceeehHHHHHHHHHHHHH
Confidence 3333444444444444555555555 78999999999999999999999 888999999999999999999999999999
Q ss_pred HhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHH--HHHHHhhhcCCCCccc
Q 013312 331 SISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF--SPLTALFLSKGAPFNF 407 (445)
Q Consensus 331 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~--g~l~~~~~~~~~~~~~ 407 (445)
++.++.+.+.+. .+-|.+.+...|.....+.+-+|+++||+..++-|+..++|+.+.|.+. +++.++. ++
T Consensus 112 Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~-------~w 184 (448)
T COG2271 112 GFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-------GW 184 (448)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc-------ch
Confidence 999987766665 6679999999999999999999999999999999999999999999999 7777764 33
Q ss_pred chhHHHHHHHHHHHHHHHHHhc
Q 013312 408 PGFSIMCIGLASMVAFIQSLMM 429 (445)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~ 429 (445)
... |++-++++++..++.++.
T Consensus 185 ~~~-f~~pgiiaiival~~~~~ 205 (448)
T COG2271 185 RAA-FYFPGIIAIIVALILLFL 205 (448)
T ss_pred hHH-HHHHHHHHHHHHHHHHHH
Confidence 333 555555555544444443
No 153
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.49 E-value=1.5e-12 Score=126.63 Aligned_cols=146 Identities=14% Similarity=0.074 Sum_probs=126.2
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHH
Q 013312 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (445)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (445)
..+..+.............|.+.++ +|.++.+.++..+...++..++. +..|++.||+|||+.+..+..+..++.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISI-PLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHH-HhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 4444555555555666777777766 89999999999999999999988 888999999999999999999999999988
Q ss_pred HhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 331 SISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 331 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
...++.+.++.. .+.|++.+...+...+++.|.+|+++|+++.++......+|..++|.+.|++.++.
T Consensus 85 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 153 (485)
T TIGR00711 85 GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY 153 (485)
T ss_pred hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc
Confidence 888887766665 77788989999999999999999999999999999999999999999999998764
No 154
>PRK03699 putative transporter; Provisional
Probab=99.49 E-value=3.4e-12 Score=120.39 Aligned_cols=148 Identities=12% Similarity=0.026 Sum_probs=120.5
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
.+...+..++...........+|.+.++ +|+|+.+.++..+...++..++. +..|++.||+|||+.+..+..+..++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~-~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISI-FLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3334444444444445556667776655 89999999999999999999988 888999999999999999999888888
Q ss_pred HHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 328 FICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 328 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
+...+.++.+..... .+.|++.+...+...+++.|.+|+++|+++.+..+....+++.++|.+.+.+.+.
T Consensus 87 ~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (394)
T PRK03699 87 AGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR 157 (394)
T ss_pred HHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888777665554 6678888888888889999999999999999999888899999999998887653
No 155
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.49 E-value=2.1e-12 Score=122.48 Aligned_cols=149 Identities=11% Similarity=0.070 Sum_probs=125.2
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
+....+..+...+.........|.+.+ .+|.++.+.++..+...++..++. +..|++.||+|||+.+..+..+..++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~s~~~~g~~~~~~~~~~~~~~-~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 91 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAG-EFGLTTVDAASLISAALISRWFGA-LMFGLWGDRYGRRLPMVTSIVLFSAGT 91 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 334455555555555555666666554 489999999999999999999998 778999999999999999999988888
Q ss_pred HHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 328 FICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 328 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+...+.++.+..+.. ++.|++.+...+...+++.|..|+++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 92 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 92 LACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888887766664 77788999999999999999999999999999999999999999999999888764
No 156
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.49 E-value=3.1e-12 Score=123.77 Aligned_cols=155 Identities=14% Similarity=0.076 Sum_probs=124.5
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchhHHHHHHH
Q 013312 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLF 321 (445)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~ 321 (445)
++++.++..+...++..++++....+++.|+++.+|+++.+.+.............. .++|+++|| +|||+.+..+..
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~-~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLV-AIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchHHHHHHHHH
Confidence 344567778888888888999999999999988899999988777766554444444 677999999 599999999999
Q ss_pred HHHHHHHHHHhcCC-chhHHH-HHHHHhhhhhhhhhHHHHHhcccCCcc--chhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 322 AACINMFICSISWS-AWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPNE--QGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 322 ~~~~~~~~~~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
+..++..++.+.++ .+.+.. ..+.+++.+...+...++..|.+|+++ ++.+.++.+...++|..++|.+.|++.++
T Consensus 97 ~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~ 176 (500)
T PRK09584 97 VLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK 176 (500)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99988888777643 333333 356788888888888899999998654 45688889999999999999999999886
Q ss_pred h
Q 013312 398 F 398 (445)
Q Consensus 398 ~ 398 (445)
.
T Consensus 177 ~ 177 (500)
T PRK09584 177 Y 177 (500)
T ss_pred h
Confidence 5
No 157
>PRK11043 putative transporter; Provisional
Probab=99.49 E-value=3.5e-12 Score=120.74 Aligned_cols=169 Identities=14% Similarity=0.100 Sum_probs=127.8
Q ss_pred HHHHHhhhhhhHHHHHHH--HHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHh
Q 013312 255 AFFSGLSEGGMQASFLYF--LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 332 (445)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (445)
.+.....+.....+.|.+ +++.+|.++.+.++..+...++..++. +..|+++||+|||+.+..+..+..++.+...+
T Consensus 12 ~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 90 (401)
T PRK11043 12 AGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQ-LLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW 90 (401)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 333333444445555544 445589999999999999999999998 88899999999999999999888888888888
Q ss_pred cCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhH
Q 013312 333 SWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFS 411 (445)
Q Consensus 333 ~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~ 411 (445)
.++.+.+... .+.|++.+...+...+.+.|.+|++++++..+..+....++..++|.+.+.+.++. ++...
T Consensus 91 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-------g~~~~- 162 (401)
T PRK11043 91 VESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-------GWQAI- 162 (401)
T ss_pred hcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------ChHHH-
Confidence 8777666554 66677777777777888999999999999999999999999999999999998865 33332
Q ss_pred HHHHHHHHHHHHHHHHhccCC
Q 013312 412 IMCIGLASMVAFIQSLMMSHT 432 (445)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~ 432 (445)
+.+.+++.++..+..+..+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 163 FATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCCC
Confidence 444444444444444444443
No 158
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.49 E-value=3.4e-12 Score=119.30 Aligned_cols=149 Identities=17% Similarity=0.159 Sum_probs=123.1
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
++...+..+...........+.|.++++.+|+|+.+.++..+...++..++. +..|++.||+|||+.+..+.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLR-IILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 3445555666666667778888877877899999999999999999999998 888999999999999999999999998
Q ss_pred HHHHhcC-CchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 328 FICSISW-SAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 328 ~~~~~~~-~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+...+.+ +.+.+... ++.|++.+ ..+....++.|.+|+++|+++.++.....++|..+++.+.+.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 153 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSL 153 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 8888887 77766554 55676644 34566788999999999999999999999999999988888877653
No 159
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.48 E-value=4.5e-12 Score=119.91 Aligned_cols=152 Identities=18% Similarity=0.141 Sum_probs=122.0
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 013312 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (445)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (445)
+|.+....+..++..........+.+.+.++ +|.++.+.|+..+...++..+++ +..|++.||+|||+.+..+..+..
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~-~~~g~l~dr~g~k~~l~~~~~~~~ 89 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISA-WISGVVAEIIGPLKTMMIGLLLWC 89 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHH
Confidence 4556666777777777777777888999876 79999999999999999999998 788999999999999999888888
Q ss_pred HHHHHHH---hc-CCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Q 013312 325 INMFICS---IS-WSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN-IVSPLIFSPLTALF 398 (445)
Q Consensus 325 ~~~~~~~---~~-~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~i~~~~~g~l~~~~ 398 (445)
++.+... .. ++.+.++.. .+.|++.+...+.....+.+..|+++|++++|+.+...++|. .++|.+.+.+.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~ 169 (402)
T TIGR00897 90 VGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF 169 (402)
T ss_pred HHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 7765432 22 344444433 556777777777778888889999999999999999999996 57898888887764
No 160
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.48 E-value=7e-12 Score=117.58 Aligned_cols=148 Identities=15% Similarity=0.088 Sum_probs=114.5
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (445)
|.++...+................+.+.++.+|+|+.+.+++.++..+...+.+ +..|++.||+|.|+++..+..+..+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~r-ip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLR-VPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHH
Confidence 455555555444444555555555555554699999999999999999999998 5569999999999999999999888
Q ss_pred HHHHHHhc-----CCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 326 NMFICSIS-----WSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (445)
Q Consensus 326 ~~~~~~~~-----~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 395 (445)
..+...+. ++.+.+++. .+.|++ +..++.....+++.+|+++||++.|+....+++|..+++.+.+.+.
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 88888775 566655554 677776 6678888999999999999999999998777777777666665543
No 161
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.47 E-value=2.6e-10 Score=105.84 Aligned_cols=370 Identities=13% Similarity=0.102 Sum_probs=210.1
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (445)
+..+.++.+.++...+.-+..-..|.++.+.. | + +....+...-.-.+...++++..|.+.||..|+++...+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~-p--~----sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~ 74 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIF-P--G----SLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTS 74 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C--C----CcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHH
Confidence 45667899999999999998888899887642 1 1 112233334445677788999999999999999998877
Q ss_pred HHHHHHHHHHH----H--hhcC------cchhHHHHHHHHHhhhccchhHHHHHHHHHhcCC------CccchhhHHHHH
Q 013312 88 LTLSIIPLAIL----A--YRRS------ISFFYAYYALRTLTAMVCEGSINCLALAYVADNI------SERQRASAFGIL 149 (445)
Q Consensus 88 ~~~~~~~~~~~----~--~~~~------~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~------~~~~r~~~~~~~ 149 (445)
.+..-++..+. . +... ......+++.-.+.|....-.......+.=.||. +++++.+.++.+
T Consensus 75 l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~m 154 (432)
T PF06963_consen 75 LVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATM 154 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHH
Confidence 65443332222 2 1111 1112233333333332011111112222223443 344566666666
Q ss_pred HHHHhhhhhhhhhhhhhh----chhhHHHHHHHHHHHHHHHHHHhc----cCCCCCCCCcCCccccchhhhcccccCCCC
Q 013312 150 LGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFL----KDDVPNDDDDDLTRPIITEETEGVNQNESN 221 (445)
Q Consensus 150 ~~~~~~g~~~g~~l~~~~----~w~~~f~~~~~~~~i~~~~~~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (445)
.-.-.+..+++|++.+.+ +.+....+.+...++..+.=.+++ +..|+-..++++.++..+...+ +..+.
T Consensus 155 RRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~---~~~~~ 231 (432)
T PF06963_consen 155 RRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEE---SSSES 231 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccccccc---ccccc
Confidence 666677888899888774 455555555555555544332222 1222111111000000000000 00000
Q ss_pred CCccccccccc---chhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHH
Q 013312 222 SPVKIPVCKKI---PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTIS 298 (445)
Q Consensus 222 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 298 (445)
++.....++.. ...++.++...+.+.+...+...+++.. .-++......|+... |+++...|..-+...+.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-VLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~g 309 (432)
T PF06963_consen 232 SSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT-VLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLG 309 (432)
T ss_pred cchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH
Confidence 00000000111 1122234456667766655555555443 444577788899885 999999999999999999998
Q ss_pred HHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHH----hcCCc---hhHH---HH-HHHHhhhhhhhhhHHHHHhcccCCc
Q 013312 299 QLLFMPLLAPILGEAKLLSLGLFAACINMFICS----ISWSA---WVPY---AT-TAFSVLVVFATPSFRSIVSKQVGPN 367 (445)
Q Consensus 299 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~---~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 367 (445)
. +..+++.+|+|..+.-..+......++.+.. ...++ .... .. .+--+|.-..--...-+++|.+|++
T Consensus 310 T-~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~ 388 (432)
T PF06963_consen 310 T-WVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPES 388 (432)
T ss_pred H-HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHH
Confidence 8 8889999999998876666665444333221 12221 1111 11 2223455555677788899999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHH
Q 013312 368 EQGKAQGCISGISSFANIVSPLI 390 (445)
Q Consensus 368 ~~g~~~g~~~~~~~~g~~i~~~~ 390 (445)
+||+..|+.+..+++...+.-.+
T Consensus 389 ~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 389 ERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887665533
No 162
>TIGR00895 2A0115 benzoate transport.
Probab=99.46 E-value=1.8e-12 Score=122.52 Aligned_cols=137 Identities=14% Similarity=0.127 Sum_probs=117.1
Q ss_pred hhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhH
Q 013312 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVP 339 (445)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (445)
..........|.+.++ +|.++.+.+++.+...++..++. +..+++.||+|||+.+..+..+..++.+...+.++.+..
T Consensus 31 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (398)
T TIGR00895 31 YDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGA-LFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQL 108 (398)
T ss_pred HHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH-HHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 3334444555666555 89999999999999999999988 778999999999999999999888888888888777765
Q ss_pred HHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 340 YAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 340 ~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
... .+.+++.+...+...+++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..
T Consensus 109 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (398)
T TIGR00895 109 LILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF 168 (398)
T ss_pred HHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc
Confidence 554 67788888899999999999999999999999999999999999999999998765
No 163
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.46 E-value=1.5e-11 Score=118.62 Aligned_cols=163 Identities=15% Similarity=0.104 Sum_probs=116.6
Q ss_pred hhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-
Q 013312 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT- 342 (445)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 342 (445)
......|.+. +.+|++..+.++..+...++..++. ++.|+++||+|+|+.+..+.+...++.++..+.++.+.++..
T Consensus 54 ~~~~~~~~l~-~~~gls~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r 131 (476)
T PLN00028 54 AAAPLLPIIR-DNLNLTKSDIGNAGIASVSGSIFSR-LAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVR 131 (476)
T ss_pred HHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3444455554 5589999999998888888888887 788999999999999999988888888888888777766554
Q ss_pred HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CCCcccchhHHHHHHHHHH
Q 013312 343 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK--GAPFNFPGFSIMCIGLASM 420 (445)
Q Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~--~~~~~~~~~~~~~~~~~~~ 420 (445)
++.|++.+... ....+++|.+|+++||++.|+.+...++|..+++.+.+.+.+..... ....++.. .+.+.+++.+
T Consensus 132 ~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~-~f~i~g~l~l 209 (476)
T PLN00028 132 FFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRI-AFFVPGLLHI 209 (476)
T ss_pred HHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHH-HHHHHHHHHH
Confidence 56676665543 34567889999999999999999998999999888887665543211 01113333 3555555555
Q ss_pred HHHHHHHhcc
Q 013312 421 VAFIQSLMMS 430 (445)
Q Consensus 421 ~~~~~~~~~~ 430 (445)
+..+..+...
T Consensus 210 ~~~l~~~~~~ 219 (476)
T PLN00028 210 IMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHc
Confidence 4444444443
No 164
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.46 E-value=4.5e-12 Score=120.23 Aligned_cols=146 Identities=16% Similarity=0.122 Sum_probs=121.1
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHH
Q 013312 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (445)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (445)
......++............|.+.++ +|.++.+.++..+...++..++. +..|++.||+|||+.+..+..+..++.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 96 (406)
T PRK11551 19 LCFLVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGA-LLGGRLADRIGRKRILIVSVALFGLFSLA 96 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 34444555555555556666766665 89999999999999999999988 77899999999999999999888888887
Q ss_pred HHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 330 CSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 330 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
..+.++.+.+... .+.|++.+...+...+++.|.+|+++|++++++.+....+|..+++.+.+.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 165 (406)
T PRK11551 97 TAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD 165 (406)
T ss_pred HHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 7788777766554 7778888888999999999999999999999999999999999999888766554
No 165
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.45 E-value=2.6e-12 Score=121.35 Aligned_cols=154 Identities=11% Similarity=0.071 Sum_probs=125.6
Q ss_pred hhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-
Q 013312 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT- 342 (445)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 342 (445)
......|. +++.+|.++.+.++..+...++..++. +..|++.||+|||+.+..+..+..++.....+.++.+.++..
T Consensus 12 ~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (399)
T TIGR00893 12 NLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQ-FPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILR 89 (399)
T ss_pred hhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHH-HhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 33444444 555689999999999999999999998 788999999999999999999988888888888887776665
Q ss_pred HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHH
Q 013312 343 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVA 422 (445)
Q Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (445)
.+.|++.+...+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+.. ++.. .+.+.+++.++.
T Consensus 90 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------~~~~-~~~~~~~~~~~~ 161 (399)
T TIGR00893 90 VLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-------SWQW-AFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-------CchH-HHHHHHHHHHHH
Confidence 77789999999999999999999999999999999999999999999999988765 3332 345544444444
Q ss_pred HHHHH
Q 013312 423 FIQSL 427 (445)
Q Consensus 423 ~~~~~ 427 (445)
.+...
T Consensus 162 ~~~~~ 166 (399)
T TIGR00893 162 GVLWL 166 (399)
T ss_pred HHHhh
Confidence 44433
No 166
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.45 E-value=8.5e-13 Score=120.97 Aligned_cols=175 Identities=17% Similarity=0.176 Sum_probs=138.6
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 013312 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (445)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (445)
+.++....+++...+.+++.....+++--+++| .+-.+...|......-.+-++. .+...++.+|+|+-+++..++.+
T Consensus 368 ~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~-~ffs~klI~kiGHv~v~~lgLa~ 445 (618)
T KOG3762|consen 368 FASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILF-YFFSFKLIEKIGHVNVMYLGLAC 445 (618)
T ss_pred hcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHH-HHHHHHHHHHhcccceeeehhhH
Confidence 344555556777777777777788888888888 5666666675555555555554 48889999999999999999999
Q ss_pred HHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHH-HHHHHHHHHHHHHHHHhhhc
Q 013312 323 ACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS-SFANIVSPLIFSPLTALFLS 400 (445)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~i~~~~~g~l~~~~~~ 400 (445)
.++-++.+....++|.++.. ++-|+..+..+....+|++...||+.+.+++|+..... .+|..+|.+++|.+.+.+
T Consensus 446 ~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-- 523 (618)
T KOG3762|consen 446 NVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-- 523 (618)
T ss_pred HHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee--
Confidence 99999999999999988887 77899999999999999999999999999999988877 789999999999998875
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHH
Q 013312 401 KGAPFNFPGFSIMCIGLASMVAFIQSL 427 (445)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (445)
+....|...++.+++.++...
T Consensus 524 ------g~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 524 ------GARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHH
Confidence 233345555555555444443
No 167
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.45 E-value=4.1e-12 Score=119.25 Aligned_cols=135 Identities=13% Similarity=0.118 Sum_probs=118.6
Q ss_pred hhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHH
Q 013312 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA 341 (445)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (445)
.......+|.+.++ +|.|+.+.++..+...++..++. +..|++.||+|||+.+..+..+..++...+.+.++.+....
T Consensus 7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQ-LFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 34455677888876 79999999999999999999988 77899999999999999999999999888888877766655
Q ss_pred H-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 342 T-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 342 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
. .+.|++.+...+...+++.|..|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 142 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF 142 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4 66788888888999999999999999999999999999999999999999998865
No 168
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.45 E-value=5.7e-13 Score=127.75 Aligned_cols=165 Identities=14% Similarity=0.135 Sum_probs=127.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccccc--CchhHhHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY--GRKAMLTL 86 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~--Grr~~l~~ 86 (445)
.++......++..++.......+|.+.++ .+.+..+.|++.++..++..++.++.|+++||. ++|+...+
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 313 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKD--------KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLF 313 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHH
Confidence 34445555555666655556677777653 255667789999999999999999999999984 34443333
Q ss_pred --HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh
Q 013312 87 --PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (445)
Q Consensus 87 --~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (445)
+.+..+++.+++...++ ++.+++.+++.|+ +.+...+...+++.|.+|++++++.+++++...++|..+||.++
T Consensus 314 ~~~~~~~~l~~ll~~~~~~---~~~~~i~~~~~G~-~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~ 389 (455)
T TIGR00892 314 SFALLFNGLTHLLCALAGD---YTGLVIYCIFFGL-SFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLA 389 (455)
T ss_pred HHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHH-HhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccce
Confidence 33444555556667777 8888899999999 88888888999999999999999999999999999999999998
Q ss_pred hhh-----chhhHHHHHHHHHHHHHH
Q 013312 165 RFL-----STTSAFQAATIVSMLAAA 185 (445)
Q Consensus 165 ~~~-----~w~~~f~~~~~~~~i~~~ 185 (445)
+.+ +|++.|++.+++.++..+
T Consensus 390 G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 390 GRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eeeehhcCCcchHHHHhhHHHHHHHH
Confidence 863 588999888877665544
No 169
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.45 E-value=3.4e-12 Score=120.36 Aligned_cols=164 Identities=14% Similarity=0.143 Sum_probs=123.0
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHH
Q 013312 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (445)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 96 (445)
.+........+....|.+.++. .+.+..+.|++.+...+...++.++.|+++||+|||+.+..+.....+...
T Consensus 225 ~~~~~~~~~~~~~~~p~~l~~~-------~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~ 297 (393)
T PRK15011 225 CTLMWGTNSLYIINMPLFIINE-------LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYA 297 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 3333344444556778777642 345556778887877788888999999999999999988877766666555
Q ss_pred HHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hchhhH
Q 013312 97 ILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSA 172 (445)
Q Consensus 97 ~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~ 172 (445)
.....++ .+.+++.+++.++ +.+...+....+..|..|+ +|+++.++++....+|..+||.+++. ++|+..
T Consensus 298 ~~~~~~~---~~~~l~~~~l~~~-~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~ 372 (393)
T PRK15011 298 GMLMAHS---PAILLGLQLLNAI-YIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAV 372 (393)
T ss_pred HHHHHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 5555666 7777888988888 6677667777888998884 68999999998889999999888876 489999
Q ss_pred HHHHHHHHHHHHHHHHHhccC
Q 013312 173 FQAATIVSMLAAAYMRVFLKD 193 (445)
Q Consensus 173 f~~~~~~~~i~~~~~~~~~~e 193 (445)
|++.+++.++..+.. +..||
T Consensus 373 ~~~~~~~~~~~~~~~-~~~~~ 392 (393)
T PRK15011 373 FWFALVMIIATLFCL-LRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHH-HhhcC
Confidence 988887766655444 45554
No 170
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.45 E-value=9.4e-12 Score=118.01 Aligned_cols=157 Identities=11% Similarity=0.133 Sum_probs=122.7
Q ss_pred hhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHH
Q 013312 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPY 340 (445)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (445)
....+...+|.+.++ +|.|+.+.++..+...++..++. +..|+++||+|||+.+..+.....++.......++.+.++
T Consensus 28 ~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~ 105 (406)
T PRK15402 28 ANDMIQPGMLAVVED-FNAGAEWVPTSMTAYLAGGMFLQ-WLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFT 105 (406)
T ss_pred hhhhHhcchHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 334445556665555 89999999999999999999988 7779999999999999999988888888888877777665
Q ss_pred HH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHH
Q 013312 341 AT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLAS 419 (445)
Q Consensus 341 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (445)
.. .+.|++.+...+...+.+.|.+|+++|++..++......++..++|.+.+.+.++. ++... +.+.+++.
T Consensus 106 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-------~w~~~-~~~~~~~~ 177 (406)
T PRK15402 106 LLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-------PWRGM-FVLFAALA 177 (406)
T ss_pred HHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------CccHH-HHHHHHHH
Confidence 54 66678887778888899999999999999999998888899999999999988764 33333 44444444
Q ss_pred HHHHHHHH
Q 013312 420 MVAFIQSL 427 (445)
Q Consensus 420 ~~~~~~~~ 427 (445)
++.....+
T Consensus 178 ~~~~~~~~ 185 (406)
T PRK15402 178 ALSFFGLW 185 (406)
T ss_pred HHHHHHHH
Confidence 44444433
No 171
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.44 E-value=9.8e-12 Score=116.61 Aligned_cols=168 Identities=13% Similarity=0.176 Sum_probs=125.4
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHH-HHHHHHHHHHHHH
Q 013312 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS-LGLFAACINMFIC 330 (445)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 330 (445)
.+..++..++.......+|.|+++++|.|+.+.|+..+...+...+.+ +..|+++||+|||+.+. .+.....++.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVS-QLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 345667777778888999999988899999999999999999998888 67799999999888654 4555556666667
Q ss_pred HhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhH--HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 013312 331 SISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKA--QGCISGISSFANIVSPLIFSPLTALFLSKGAPFNF 407 (445)
Q Consensus 331 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~--~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~ 407 (445)
.+.++.+.++.. .+.+.+.+...|...++..|..|++.|+.+ .+......++|..++|.+.+.+.+.. ++
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-------~~ 154 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-------GF 154 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-------cc
Confidence 777777665543 455666666778888888888887777654 67788888999999999999998864 33
Q ss_pred chhHHHHHHHHHHHHHHHHHh
Q 013312 408 PGFSIMCIGLASMVAFIQSLM 428 (445)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~ 428 (445)
.. .+.+.+.+.++..+..++
T Consensus 155 ~~-~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 155 TV-MFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HH-HHHHHHHHHHHHHHHHHH
Confidence 33 355555555555444444
No 172
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.44 E-value=8.7e-12 Score=117.76 Aligned_cols=145 Identities=14% Similarity=0.131 Sum_probs=117.6
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHH
Q 013312 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICS 331 (445)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (445)
.....+...........+|.+.++ +|.|+.+.++..+...++..++. +..|+++||+|||+.+..+.....++.+...
T Consensus 14 ~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 91 (394)
T PRK11652 14 VLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQ-LFYGPLSDRVGRRPVILVGMSIFILGTLVAL 91 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 333334344444445556766655 89999999999999999999998 7789999999999999999998888888887
Q ss_pred hcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 332 ISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 332 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+.++.+.+... .+.|++.+...+....+..|..++++++++.+..+....++..++|.+.+.+.+..
T Consensus 92 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 159 (394)
T PRK11652 92 FAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF 159 (394)
T ss_pred HHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 77777665554 66677777777777888889899999999999999999999999999999887754
No 173
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.43 E-value=8.9e-12 Score=115.70 Aligned_cols=158 Identities=10% Similarity=-0.112 Sum_probs=114.8
Q ss_pred HhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchh
Q 013312 259 GLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV 338 (445)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (445)
+..+..+...+|.+.+| +|.|+.+.|++.+...++..+++ +..|++.||+|||+++..+......+.......++.+.
T Consensus 4 ~~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~-~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALT-IPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred hHHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34455566677777766 89999999999999999999998 66799999999988776555554444332233245555
Q ss_pred HHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHH
Q 013312 339 PYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGL 417 (445)
Q Consensus 339 ~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 417 (445)
++.. ++.|++.+. .+......+|.+|+++|+++.++.+....+|..+++.+.+++.++. +|... +.+.++
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-------gWr~~-f~~~~~ 152 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-------GLQLL-IIPIAA 152 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------chHHH-HHHHHH
Confidence 5554 667888775 4555566688999999999999999999999999999999988754 44443 555455
Q ss_pred HHHHHHHHHH
Q 013312 418 ASMVAFIQSL 427 (445)
Q Consensus 418 ~~~~~~~~~~ 427 (445)
+.++..+..+
T Consensus 153 l~~~~~~~~~ 162 (368)
T TIGR00903 153 VAAAGIILVL 162 (368)
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 174
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.43 E-value=3.3e-12 Score=118.53 Aligned_cols=168 Identities=23% Similarity=0.240 Sum_probs=144.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchh-HhHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA-MLTLP 87 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~-~l~~~ 87 (445)
.++...+..+.............|.+.++. .+.+..+.++..+...++..++.++.|++.||+|||+ .+..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEV-------LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIG 248 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 344555556666677777778888887653 2445677899999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh
Q 013312 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (445)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (445)
..+..++.+.....++ .+...+..++.|+ +.+...+...+++.|..|+++|++.++..+....+|..++|.+.+.+
T Consensus 249 ~~~~~i~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l 324 (352)
T cd06174 249 LLLAALGLLLLALAPS---LALLLVALLLLGF-GLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLL 324 (352)
T ss_pred HHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 8889999999999 88888899999999999999999999999999999999999988763
Q ss_pred ----chhhHHHHHHHHHHHHHHHH
Q 013312 168 ----STTSAFQAATIVSMLAAAYM 187 (445)
Q Consensus 168 ----~w~~~f~~~~~~~~i~~~~~ 187 (445)
+|+..+.+.+++.++..+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 325 LDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred hcccCcchHHHHHHHHHHHHHHHh
Confidence 88999999988877765543
No 175
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.42 E-value=5.5e-12 Score=113.65 Aligned_cols=373 Identities=14% Similarity=0.130 Sum_probs=209.1
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccc----ccCchhH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKAM 83 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~~ 83 (445)
+.+..+....+-..+++..-...+|+|+++. +++....+++--+..+...+.+|+.|..+| ||||||.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l--------Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP 103 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSL--------GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP 103 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHc--------CCCcccccccccccccccceecccccccccccccccccccc
Confidence 3444445555556677777777888887653 222234455555667888899999999999 5899887
Q ss_pred hHH-HHHHHHHHHHHHHhhcCcch--------------hHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhh-HHH
Q 013312 84 LTL-PLTLSIIPLAILAYRRSISF--------------FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRAS-AFG 147 (445)
Q Consensus 84 l~~-~~~~~~~~~~~~~~~~~~~~--------------~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~-~~~ 147 (445)
++. +.+..+++..+..++.+... ....+++-.+.-+ +.-.......+++.|...++++.+ +++
T Consensus 104 fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~-A~n~~qgp~ra~L~Dl~~~d~~~~~Ans 182 (498)
T KOG0637|consen 104 FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDV-ANNTLQGPCRALLADLARGDAKKTRANS 182 (498)
T ss_pred hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHh-hhhhhhhhHHHHHHHhccChhhhhccch
Confidence 765 45677777778877755321 2334444445555 555666788999999998777766 999
Q ss_pred HHHHHHhhhhhhhhhhhhhhchhh--HHHHHHHHHHHHHHHHHHhcc-------CCCCCCCCcCCccccchhhhcccccC
Q 013312 148 ILLGVLSASFVCGTLAARFLSTTS--AFQAATIVSMLAAAYMRVFLK-------DDVPNDDDDDLTRPIITEETEGVNQN 218 (445)
Q Consensus 148 ~~~~~~~~g~~~g~~l~~~~~w~~--~f~~~~~~~~i~~~~~~~~~~-------e~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (445)
.+....++|..+|..++.+.+|+- +|.....+.+.+..+-..+.. ++....... .++.....+.+
T Consensus 183 ~f~~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~------~~~~~s~~~~~ 256 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYP------QEKPLSPKGTT 256 (498)
T ss_pred hHHHHHHhcceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccc------cccCCCCCccc
Confidence 999999999999999998888743 333333222222222111111 111100000 00000000000
Q ss_pred CCCCCcccccccccchhHHHHHH-hhcchhhHHHHHHHHHHHhhhhhhHHHHHHHH-HhhcCCchhh-------------
Q 013312 219 ESNSPVKIPVCKKIPSIRDLICL-LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL-KAQFHFNKNQ------------- 283 (445)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~------------- 283 (445)
.+....+.....+.... ...+|.++.+++...+.+++...+..+...++ ++.++-|+..
T Consensus 257 ------~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~G 330 (498)
T KOG0637|consen 257 ------ARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAG 330 (498)
T ss_pred ------ccccccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhc
Confidence 00000011111122222 23456688888888888888888877777766 3344433321
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHH-HHHHH-------------
Q 013312 284 ---FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFS------------- 346 (445)
Q Consensus 284 ---~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g------------- 346 (445)
-.+=+.++.+...+.+ ....++.||+|-|+.+..+.....++..+.....+.+.... ....|
T Consensus 331 V~~G~~GL~ins~~lgi~S-~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l 409 (498)
T KOG0637|consen 331 VRMGCLGLMLNSIVLGIYS-LLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGA 409 (498)
T ss_pred cccchHHHHHHHHHHHHHH-HHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHH
Confidence 1233455666666666 56679999999665544444434444333333322221111 11111
Q ss_pred --------hhhhhhhhhHHHHHhcccCC--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 013312 347 --------VLVVFATPSFRSIVSKQVGP--NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 402 (445)
Q Consensus 347 --------~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~ 402 (445)
.-....+...++..+....+ .-+|...|+.+....+.+++.....|.+.+..++.+
T Consensus 410 ~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~ 475 (498)
T KOG0637|consen 410 LALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGN 475 (498)
T ss_pred HHHHHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcc
Confidence 11111222222222211111 234777788888888999999888899988874443
No 176
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.41 E-value=2.2e-11 Score=115.39 Aligned_cols=155 Identities=15% Similarity=0.139 Sum_probs=123.1
Q ss_pred hhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH
Q 013312 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT 342 (445)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (445)
.....-+|... +.+|.+..+.++..+...++..+++ +..|+++||+|||+.+..+..+..++.+.....++.+.++..
T Consensus 33 ~~~~p~l~~i~-~~~~~~~~~~~~~~s~~~~~~~~~~-~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~ 110 (413)
T PRK15403 33 DLIQPGIINVV-RDFNADVSLAPASVSLYLAGGMALQ-WLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIA 110 (413)
T ss_pred HhhccCHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 33444455544 4489999999999999999999998 778999999999999999999999998888888887766665
Q ss_pred -HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHH
Q 013312 343 -TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMV 421 (445)
Q Consensus 343 -~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (445)
++.|++.+...+....+..|.+|++++++++++.+....++..++|.+.+.+.++. ++.. .|.+.+++.++
T Consensus 111 r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-------gw~~-~f~~~~~~~~i 182 (413)
T PRK15403 111 RFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-------HWKV-LFAIIAVMGLI 182 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CHHH-HHHHHHHHHHH
Confidence 66787777666777788899999999999999999999999999999999888764 3333 35555555555
Q ss_pred HHHHHH
Q 013312 422 AFIQSL 427 (445)
Q Consensus 422 ~~~~~~ 427 (445)
+.+..+
T Consensus 183 ~~~~~~ 188 (413)
T PRK15403 183 AFVGLL 188 (413)
T ss_pred HHHHHH
Confidence 554433
No 177
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.41 E-value=9.5e-12 Score=118.83 Aligned_cols=149 Identities=12% Similarity=0.068 Sum_probs=122.0
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
+....+..+.............|.+. +.+|.|+.+.++..+...++..++. +..|++.||+|||+.+..+.....++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~l~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~ 97 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIK-ADLGLTDMEGAFLATAAFIGRPFGG-ALFGLLADKFGRKPLMMWSIVAYSVGT 97 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 33344444444444444444455444 5589999999999999999999998 788999999999999999999999999
Q ss_pred HHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 328 FICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 328 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+...+.++.+.++.. .+.|++.+...+....++.|..|+++|+++.++......+|..+++.+.+.+.+..
T Consensus 98 ~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 98 GLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 888888887776665 77788888899999999999999999999999999999999999998888776653
No 178
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.41 E-value=2.6e-11 Score=114.23 Aligned_cols=133 Identities=10% Similarity=-0.023 Sum_probs=117.1
Q ss_pred hhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH
Q 013312 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT 342 (445)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (445)
......+|...+| +|+|..+.++..+...++..+++ +..|++.||+|||+++..+..+.+++.+..++.++.+.++..
T Consensus 26 ~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~~~~l~~-~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~ 103 (393)
T PRK09705 26 TSVGPLLPQLRQA-SGMSFSVAALLTALPVVTMGGLA-LAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSS 103 (393)
T ss_pred hccchhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHh-hhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHH
Confidence 4455667776655 89999999999999999999988 888999999999999999999999999999999988876665
Q ss_pred -HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 343 -TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 343 -~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
++.|++.+...+....++.+.+| ++|++++|..+.....|..+++.+.+.+.++.
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~ 159 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS 159 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77799999888888889998887 88999999999999999999999999887753
No 179
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.40 E-value=1.7e-11 Score=119.62 Aligned_cols=149 Identities=13% Similarity=0.158 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
+..+.+..++..+.........|.+.+ .+|.|+.+.++..+...++..++. +..|++.||+|||+.+..+.++..++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~ 99 (496)
T PRK03893 22 FSAAWLGYLLDGFDFVLITLVLTEVQG-EFGLTTVQAASLISAAFISRWFGG-LLLGAMGDRYGRRLAMVISIVLFSVGT 99 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 334445555555555555556666554 489999999999999999999988 888999999999999999999999988
Q ss_pred HHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 328 FICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 328 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+...+.++.+.+... .+.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 100 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 171 (496)
T PRK03893 100 LACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW 171 (496)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 888888777766554 67788888889999999999999999999999999999999999999999887754
No 180
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.40 E-value=2.5e-11 Score=116.18 Aligned_cols=130 Identities=13% Similarity=0.106 Sum_probs=104.4
Q ss_pred hHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC----CchhHH
Q 013312 265 MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW----SAWVPY 340 (445)
Q Consensus 265 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 340 (445)
+....| ++++ .|.|+.+.++..+...++..++. +..|++.||+|||+.+..+.++..++.+.....+ +.+...
T Consensus 46 ~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 122 (438)
T TIGR00712 46 FALAMP-YLVE-QGFSKGELGFALSAISIAYGFSK-FIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMF 122 (438)
T ss_pred HHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhh-hccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHH
Confidence 344444 5556 59999999999999999999988 8889999999999999988888888877665542 223333
Q ss_pred H-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 341 A-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 341 ~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
. ..+.+++.+...+.....+.|.+|+++||+++|+.+....+++.++|.+.+...+.
T Consensus 123 ~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 123 VLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 3 25567778888888888899999999999999999999999999999888766553
No 181
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.39 E-value=4.1e-12 Score=119.19 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=115.8
Q ss_pred HHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCc
Q 013312 257 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA 336 (445)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (445)
........+....|.+ ++.+|.|+.+.+++.+...++..++. +..|+++||+|||+.+..+..+..++.++..+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 83 (379)
T TIGR00881 6 AYYLVRKNFALAMPYL-VEEIGLSKTDLGLLLSSFSIAYGISK-FVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSL 83 (379)
T ss_pred HHHHhHHhhhhhhHHH-HHHhCCCHhHHHHHHHHHHHHHHhhh-hhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhH
Confidence 3334444555556654 45589999999999999999999988 788999999999999999999999999888888887
Q ss_pred hhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHH-HHHHHHHh
Q 013312 337 WVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPL-IFSPLTAL 397 (445)
Q Consensus 337 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~-~~g~l~~~ 397 (445)
+..+.. .+.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|. +.+.+.+.
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL 146 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc
Confidence 766665 67788888899999999999999999999999999999999999995 55544443
No 182
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.39 E-value=1.8e-11 Score=114.98 Aligned_cols=164 Identities=14% Similarity=0.091 Sum_probs=137.1
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (445)
|.++...+..++...+........|.+.+| .+.+..+.|.+.+...++..+..++.|++.||+|+|+.+.++
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~--------~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~ 276 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA--------AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLIS 276 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHH
Confidence 445566666677777777777888888754 355667889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHH-HHHhhhhhhhhhhhhh
Q 013312 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARF 166 (445)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~ 166 (445)
.+...+.....+++++ .+.+++.+.+.|+ +.+...+....++.+. |+++|++..++++ ...++|..+||.++|.
T Consensus 277 ~~~~~~~~~~~~~~~~---~~~~~~~q~l~g~-~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 277 AIACVGRWAIIGAIEA---FPLIFLLQILHCG-TFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred HHHHHHHHHHHHhHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 8999999999999 8899999999999998 9999999999986 4678889999988887
Q ss_pred h----chhhHHHHHHHHHHHHHH
Q 013312 167 L----STTSAFQAATIVSMLAAA 185 (445)
Q Consensus 167 ~----~w~~~f~~~~~~~~i~~~ 185 (445)
+ ++ ..|++.+.++++..+
T Consensus 352 l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 352 IYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHhccH-HHHHHHHHHHHHHHH
Confidence 5 53 557777766665443
No 183
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.39 E-value=1.6e-11 Score=115.13 Aligned_cols=154 Identities=16% Similarity=0.098 Sum_probs=118.3
Q ss_pred hhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHH
Q 013312 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA 341 (445)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (445)
.+......|.+.+ ++|.|+.+.++..+...++..+++ +..|+++||+|||+.+..+..+..++.+...+.++.+.++.
T Consensus 19 ~~~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~~~~-~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (377)
T TIGR00890 19 VYTWTLLAPPLGR-YFGVGVTAVAIWFTLLLIGLAMSM-PVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYL 96 (377)
T ss_pred HhhhhhHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHh-hhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555554 589999999999999999999998 78899999999999999999999999988888888776666
Q ss_pred H-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHH
Q 013312 342 T-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASM 420 (445)
Q Consensus 342 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (445)
. .+.|++.+...+.......+.+| ++|+++.+.......+|..+++.+.+.+.+.. ++.. .+.+.+++.+
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~-~f~~~~~~~~ 167 (377)
T TIGR00890 97 TYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE-------GVPA-AFIYMGIIFL 167 (377)
T ss_pred HHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-------cHHH-HHHHHHHHHH
Confidence 4 66788888777777777888776 67999999999999999888777777665532 2332 3455555544
Q ss_pred HHHHHH
Q 013312 421 VAFIQS 426 (445)
Q Consensus 421 ~~~~~~ 426 (445)
+.....
T Consensus 168 ~~~~~~ 173 (377)
T TIGR00890 168 LVIVLG 173 (377)
T ss_pred HHHHHH
Confidence 444333
No 184
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.38 E-value=5e-11 Score=114.60 Aligned_cols=168 Identities=18% Similarity=0.180 Sum_probs=135.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
.+..+....++..+....+...+|.+.++. ++.+....|++.++..+|..++++..+++.+|+++++.+..+.
T Consensus 219 ~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~-------l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~ 291 (524)
T PF05977_consen 219 PLRSVLLRSFLFNLFASAVWALLPLFARDV-------LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLAS 291 (524)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhhHHHHHH-------hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHH
Confidence 344444444444455555566788888753 3555678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh--
Q 013312 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-- 166 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~-- 166 (445)
+..+++.+..+++++ .+...+.-++.|+ +.....+..++.+.+..|++.|||++++++.....+..+|..+.|.
T Consensus 292 ~~~a~~~~~lal~~~---~~~~~~~l~l~G~-~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 292 LLFALALLLLALSPS---FWLALIALFLAGA-AWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred HHHHHHHHHHhcchH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 8888999999999 7778888889999999999999999999998888777777777666
Q ss_pred --hchhhHHHHHHHHHHHHHHHH
Q 013312 167 --LSTTSAFQAATIVSMLAAAYM 187 (445)
Q Consensus 167 --~~w~~~f~~~~~~~~i~~~~~ 187 (445)
+|-+..+.+.++..++..++.
T Consensus 368 ~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 368 DHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHH
Confidence 477778877776544444433
No 185
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.38 E-value=1.9e-11 Score=117.87 Aligned_cols=132 Identities=11% Similarity=0.027 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHh-----cCCchh
Q 013312 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI-----SWSAWV 338 (445)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 338 (445)
.+....|.+.++ +|.+..+.|++.+...++..+++ +..|+++||+|+|+++..+.++.++..+.++. .++.+.
T Consensus 47 ~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~-~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (467)
T PRK09556 47 NFKAAQNDMIST-YGLSTTELGMIGLGFSITYGVGK-TLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGL 124 (467)
T ss_pred ChhhhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHH-hhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 344556665555 89999999999999999999998 78899999999999988887777666655544 355555
Q ss_pred HHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 339 PYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 339 ~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
++.. .+.|++.+...|....++.|.+|+++||+++|+.+....+|..+++.+..++.+.
T Consensus 125 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 125 MIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 5554 6678888888899999999999999999999999999999999999888777665
No 186
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.36 E-value=1.1e-10 Score=110.26 Aligned_cols=147 Identities=11% Similarity=0.037 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHH
Q 013312 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (445)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (445)
..+....+...+.........|.+ ++++|.|+.+.|++.+...++..+++ +..+++.||+|+|+.+..+..+.+++.+
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~-~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMA-IPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 344555555555555556677766 45589999999999999999999998 7789999999999999999999998887
Q ss_pred HHHhc---CCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 329 ICSIS---WSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 329 ~~~~~---~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
++... ++.+.+... ++.|++.+...+..+.++.+..|++++++..++.+...++|..++|.+.+.+...
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 75443 344444443 6779999999999999999999999999999999999999999999999988643
No 187
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.35 E-value=7.9e-13 Score=119.40 Aligned_cols=177 Identities=10% Similarity=0.135 Sum_probs=139.3
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
+..++++..+...--+.+....+- .++.+|.++...|++.+...+..++.+ ++.|++.||++|++++.+|..+-.++.
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~s-Pl~gyLadryNR~~v~~vG~~iW~~Av 112 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIAS-PLFGYLADRYNRKRVIAVGIFIWTLAV 112 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHH-HHHHHHHhhcCcceEEeeHHHHHHHHH
Confidence 334444444444444444443333 344589999999999999999999998 888999999999999999999999999
Q ss_pred HHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 013312 328 FICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFN 406 (445)
Q Consensus 328 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~ 406 (445)
+..++..+.|.+.++ .+.|+|.....|..+++++|.+|.++|++++++.+....+|..+|-...+.+.++. .
T Consensus 113 ~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~-------~ 185 (493)
T KOG1330|consen 113 FASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT-------F 185 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc-------c
Confidence 999999888988887 88999999999999999999999999999999999999999999998888887765 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHhccCCC
Q 013312 407 FPGFSIMCIGLASMVAFIQSLMMSHTP 433 (445)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (445)
+..+.+...+++.++..++.+...+++
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 122234555556665555555554443
No 188
>PRK10133 L-fucose transporter; Provisional
Probab=99.34 E-value=2.7e-10 Score=108.61 Aligned_cols=145 Identities=10% Similarity=-0.001 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHH
Q 013312 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (445)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (445)
..+.+..+...+.........|.+ ++.+|.|+.+.|+..+...++..+++ +..|++.||+|+|+.+..+..+..++.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~-~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIP-IPAGILMKKLSYKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 344555566666666667778877 66699999999999999999999998 7789999999999999999999999887
Q ss_pred HH---HhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 329 IC---SISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (445)
Q Consensus 329 ~~---~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 395 (445)
++ ..+++.+.+... ++.|++.+...+..+.++.+..|+++++...+..+....+|..++|.+.+.+.
T Consensus 107 l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 107 LFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 345566655554 77799999999999999988777666667899999999999999999887765
No 189
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.34 E-value=1.3e-10 Score=107.35 Aligned_cols=159 Identities=11% Similarity=0.113 Sum_probs=128.5
Q ss_pred hHHHHHHHHHhhcCCchhh-HHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-
Q 013312 265 MQASFLYFLKAQFHFNKNQ-FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT- 342 (445)
Q Consensus 265 ~~~~~~~~~~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 342 (445)
...+...++.+.+|+++.+ .|.+......+..+.. +.+|+++||+|.|+++..+.+...+..++.+++++.+.+.+.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~q-Ip~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVL-VPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555676679999999 9999999999999998 888999999999999999999999999999998887766666
Q ss_pred HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHH
Q 013312 343 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVA 422 (445)
Q Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (445)
+++|++.+... ....++.+.+|+++|+++.|+.+....+|.++++++.+++ ..+ +.. .+..+ ..+......++
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~-gWr---~y~~L-n~Isl~s~~~a 195 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTL-GWI---SYSTL-NIISLVFMTFS 195 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-Cch---hHHHH-HHHHHHHHHHH
Confidence 88999999999 9999999999999999999999999999999999999994 333 111 12222 23344445555
Q ss_pred HHHHHhccC
Q 013312 423 FIQSLMMSH 431 (445)
Q Consensus 423 ~~~~~~~~~ 431 (445)
+++.+++++
T Consensus 196 ~~~a~~LP~ 204 (511)
T TIGR00806 196 VFLALFLKR 204 (511)
T ss_pred HHHHHhCCC
Confidence 666666653
No 190
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.33 E-value=1.9e-10 Score=110.55 Aligned_cols=122 Identities=16% Similarity=0.148 Sum_probs=97.5
Q ss_pred HHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC----CchhHHHH
Q 013312 267 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW----SAWVPYAT 342 (445)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 342 (445)
...| ++.+. |.++.+.++..+...++..+++ +..|+++||+|+|+++..+.++..++.+.+.+.+ +.+..+..
T Consensus 50 ~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~-~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 126 (452)
T PRK11273 50 LAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSK-FIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL 126 (452)
T ss_pred HhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHH-hhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 3445 55565 9999999999999999999998 8889999999999999999998888887776653 33333333
Q ss_pred -HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHH
Q 013312 343 -TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF 391 (445)
Q Consensus 343 -~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 391 (445)
.+.|++.+...+.....+.+.+|+++|+++.|+.+....+|+.+.+.+.
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 176 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLF 176 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 6668888877887788888999999999999999999998875544343
No 191
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.32 E-value=1e-10 Score=110.58 Aligned_cols=175 Identities=9% Similarity=-0.012 Sum_probs=122.6
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 013312 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (445)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (445)
+|.++......++...+......++|.|+++++|.++.+.|...+...+...+++ +..|+++||+|||+.+..+.....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~-~~~G~l~Dr~grr~~~~~~~~~~~ 79 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQ-PLFGLISDKLGLKKHLLWIISGLL 79 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHH
Confidence 3667777888888888888889999999998899999999999999999999999 788999999999998877665554
Q ss_pred HHHHHH---HhcCC----ch-hHHH-HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 325 INMFIC---SISWS----AW-VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (445)
Q Consensus 325 ~~~~~~---~~~~~----~~-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 395 (445)
+..... ...+. .+ .... ..+.+++.+...+....+..+..+ +++...|......++|..++|.+.|.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~ 157 (396)
T TIGR00882 80 VLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILF 157 (396)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhh
Confidence 433321 11111 11 1111 244466666667777777766433 3456778888889999999999998876
Q ss_pred HhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 396 ALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
+. ++. ..|.+.+++.++..+..+..++
T Consensus 158 ~~--------~~~-~~f~~~~~~~~~~~~~~~~~~~ 184 (396)
T TIGR00882 158 SI--------DPQ-IVFWLGSGFALILMLLLMFAKP 184 (396)
T ss_pred cc--------Cch-HHHHHHHHHHHHHHHHHHHhCC
Confidence 53 222 2355555555554444444333
No 192
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.31 E-value=8.1e-08 Score=90.54 Aligned_cols=359 Identities=11% Similarity=0.110 Sum_probs=204.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHh-hhhccccccccCchhHhHH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVM-MPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~-~~~~G~l~Dr~Grr~~l~~ 86 (445)
+.+....+..|+..+++++.-|.=..+.. +..+.....+.++-+...+...+. .++.+++++|++|++++-.
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~lKD~lvv-------~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~ 79 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRDTKDTLVV-------TAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhheee-------cccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHH
Confidence 34555666667777777766554433321 111222245677777777777776 8999999999999999988
Q ss_pred HHHHHHHHHHHHHhh--cCcch--------------------------hHHHHHHHHHhhhccchhHHH-HHHHHHhcCC
Q 013312 87 PLTLSIIPLAILAYR--RSISF--------------------------FYAYYALRTLTAMVCEGSINC-LALAYVADNI 137 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~--~~~~~--------------------------~~~l~~~r~l~G~~~~g~~~~-~~~~~i~~~~ 137 (445)
....+.....++++. |+.+. .|..-+..+...+ -+....+ ...++.+|.+
T Consensus 80 ~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el-w~~~vvS~lFW~fandi~ 158 (472)
T TIGR00769 80 VISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL-WGSVVLSLLFWGFANQIT 158 (472)
T ss_pred HHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHhcC
Confidence 877777777666654 11100 1222233334444 2233333 7789999999
Q ss_pred CccchhhHHHHHHHHHhhhhhhhhhhhhhhc------------h----hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCc
Q 013312 138 SERQRASAFGILLGVLSASFVCGTLAARFLS------------T----TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDD 201 (445)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~------------w----~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~ 201 (445)
+.+|-.|.++++..+.++|.++|+.+...+. | +..+.+.++...+. +.+...+.+....+++.
T Consensus 159 t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~-~~~~~~l~~~~~~~~~~ 237 (472)
T TIGR00769 159 TIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAI-ILLYWWVNRNVLTDPRS 237 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCccc
Confidence 9999999999999999999999998776642 2 12333333333333 33333443322111110
Q ss_pred CCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCch
Q 013312 202 DLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK 281 (445)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 281 (445)
.+ . +. ++++++.+....+.++.+.++|.++.+.+...+++......+...-...++.+ -|+
T Consensus 238 ~~--------------~-~~---~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~ 298 (472)
T TIGR00769 238 YN--------------P-AL---KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSP 298 (472)
T ss_pred cc--------------h-hh---ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCH
Confidence 00 0 00 11112224467788888899999988888888887777777665666666644 344
Q ss_pred hh----HHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH---HHHHHHhcCCc----------hhHHHHHH
Q 013312 282 NQ----FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI---NMFICSISWSA----------WVPYATTA 344 (445)
Q Consensus 282 ~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~~ 344 (445)
.+ .|.+....++..++.+ +..+++.+|+|-+....+.-++..+ +++.+....+. .......+
T Consensus 299 ~~~~~f~g~~~~~~gi~tl~~~-l~~~~l~~~~Gw~~~a~i~Pii~lit~~~Ff~~~~f~~~~~~~~~~l~~~pl~l~v~ 377 (472)
T TIGR00769 299 NEYSAFMGDFSTWTGVVSVTMM-LLSGNVIRKYGWLTAALITPLVMLLTGVAFFSLIFFGGPAAPLVAKLGMTPLLLAVY 377 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhhccChHHHHHH
Confidence 33 3444556666666666 4448999999987655443333333 33322222211 11111111
Q ss_pred HHhhh-hh-------hhhhHHHHHhcccCCccchhHHHHHHHHH-HHHHHHHHHHHHHHH
Q 013312 345 FSVLV-VF-------ATPSFRSIVSKQVGPNEQGKAQGCISGIS-SFANIVSPLIFSPLT 395 (445)
Q Consensus 345 ~g~~~-~~-------~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~i~~~~~g~l~ 395 (445)
.|... .. ..-...=..--..++|.|.++=+....+. ++|-..|..+...+.
T Consensus 378 ~g~~~~v~~k~~kYsl~dp~kEmly~pld~e~K~K~Ka~iD~v~~r~Gks~gs~i~~~l~ 437 (472)
T TIGR00769 378 VGAIQNILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAIDVVAARLGKSGGALIQQGLL 437 (472)
T ss_pred HHHHHHHHHHHhhhccccHHHHHhcccCCHHHHHHhHhhhhhhhhhhhhHHHHHHHHHHH
Confidence 11111 11 11111112222356788888888777766 477777776555433
No 193
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.29 E-value=5.7e-10 Score=106.60 Aligned_cols=139 Identities=10% Similarity=-0.016 Sum_probs=101.0
Q ss_pred HHHHHhhhhhhHHHHHHHHHhhcC---Cchhh---HHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHH
Q 013312 255 AFFSGLSEGGMQASFLYFLKAQFH---FNKNQ---FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (445)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~---~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (445)
.++...-... ..+...++.++++ .+..+ .+..++...++..+++ ++.|+++||+|||+.+..+.....++.+
T Consensus 31 ~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~-~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 31 NLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGG-WLFGRIADKHGRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 3333333333 4444445555553 44443 3334455555555877 7889999999999999999999999999
Q ss_pred HHHhcCCch--------hHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 329 ICSISWSAW--------VPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (445)
Q Consensus 329 ~~~~~~~~~--------~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 395 (445)
..++.++.. .+... ++.|++.+...+...+++.|..|+++||+..++.+.....|..+++.+...+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 184 (432)
T PRK10406 109 VIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQ 184 (432)
T ss_pred HHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877643 23333 67799999999999999999999999999999888888888888776655544
No 194
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.27 E-value=4.4e-11 Score=105.97 Aligned_cols=148 Identities=16% Similarity=0.184 Sum_probs=128.9
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhh
Q 013312 277 FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPS 355 (445)
Q Consensus 277 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~ 355 (445)
.+-+..++|+++....+...+.+ .+.|.+.||+|+|..+.+|+.++..+.+++++.++.+..+++ .+-|++.......
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvn-p~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVN-PFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhc-ccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 35566789999999999999999 777899999999999999999999999999999999887777 8889999999999
Q ss_pred HHHHHhcccCCcc-chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCC
Q 013312 356 FRSIVSKQVGPNE-QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 433 (445)
Q Consensus 356 ~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (445)
..++++|.+|+|+ |++++|+.-....+|-.+||..+|.++|.. ++. ++|++.++++++...+.+...+.+
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~-------aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKS-------APFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCc-------CcHHHHHHHHHHHHHHHHheeCcc
Confidence 9999999999875 699999999999999999999999999986 333 356788877777777666655543
No 195
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.27 E-value=6.1e-11 Score=111.92 Aligned_cols=160 Identities=13% Similarity=0.049 Sum_probs=115.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHH
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 89 (445)
+.......+............+|.+.++. .+.+..+.+...+...++..++.++.|+++||+|||+.+.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 293 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQT-------LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 44445555555566666677788887543 24445667888888999999999999999999999998775554
Q ss_pred HHHHHH-H-HHHhh--cCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHH-HHHHhhhhhhhhhhh
Q 013312 90 LSIIPL-A-ILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGIL-LGVLSASFVCGTLAA 164 (445)
Q Consensus 90 ~~~~~~-~-~~~~~--~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~l~ 164 (445)
+..+.. . ...+. ++ .+.+....++.|+ +.+...+...+++.|.+|+++|+++.++. +....+|..++|.++
T Consensus 294 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~ 369 (394)
T TIGR00883 294 LAALLAVPLLMALLDSGS---FTLFFFLVLGLAL-IGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA 369 (394)
T ss_pred HHHHHHHHHHHHHhcCCc---hHHHHHHHHHHHH-HHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence 443332 2 22222 34 6667777888888 77777888999999999999999999874 555677888888888
Q ss_pred hhh----c-hhhHHHHHHHHH
Q 013312 165 RFL----S-TTSAFQAATIVS 180 (445)
Q Consensus 165 ~~~----~-w~~~f~~~~~~~ 180 (445)
+.+ + |+..++......
T Consensus 370 g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 370 AALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHHcCcchhHHHHHHHHH
Confidence 764 5 777666655443
No 196
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.26 E-value=4.7e-11 Score=115.81 Aligned_cols=147 Identities=14% Similarity=0.073 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHh---hcCcc-----hhHHHHHHHHHhhh
Q 013312 48 LAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY---RRSIS-----FFYAYYALRTLTAM 119 (445)
Q Consensus 48 ~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~-----~~~~l~~~r~l~G~ 119 (445)
.+....++......++..++.++.|+++||+|||+.+..+..+.+++.++..+ ..... ....+....+..+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (481)
T TIGR00879 316 VSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAF 395 (481)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHH
Confidence 33355678888889999999999999999999999999988888887776662 11110 12233333333333
Q ss_pred ccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----hchhhHHHHHHHHHHHHHHHHHHhccCCC
Q 013312 120 VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDV 195 (445)
Q Consensus 120 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~ 195 (445)
......+....++.|.+|+++|++++++.+....+|..++|.+.+. .+|++.|++.++++++..+...+..||++
T Consensus 396 -~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 396 -FAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred -HHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 2223336677788999999999999999999999999999987765 37999999888887777777666667654
No 197
>PRK09952 shikimate transporter; Provisional
Probab=99.26 E-value=6.3e-10 Score=106.37 Aligned_cols=146 Identities=10% Similarity=-0.009 Sum_probs=105.0
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHhhc--CCchhhHHHHHH-----HHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 013312 250 QAAVVAFFSGLSEGGMQASFLYFLKAQF--HFNKNQFADLML-----IAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (445)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~g~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (445)
...+..++...-...+....|.+..+.+ +.++.+ +...+ ...++..+++ ++.|++.||+|||+.+..+..+
T Consensus 26 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~~~G~l~Dr~Grr~~l~~~~~~ 103 (438)
T PRK09952 26 GSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGG-VVFGHFGDRLGRKRMLMLTVWM 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHH-HHHHHHHHhhccHHHHHHHHHH
Confidence 3333444443333333334455555544 566653 54432 2334455666 6779999999999999999999
Q ss_pred HHHHHHHHHhcCCch--------hHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 013312 323 ACINMFICSISWSAW--------VPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (445)
Q Consensus 323 ~~~~~~~~~~~~~~~--------~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 393 (445)
..++.++.++.++.+ .+... .+.|++.+...+....++.|..|+++||...+..+....+|..+++.+.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~ 183 (438)
T PRK09952 104 MGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSL 183 (438)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988765 23333 677999999999999999999999999999999988888888888877776
Q ss_pred HHHh
Q 013312 394 LTAL 397 (445)
Q Consensus 394 l~~~ 397 (445)
+...
T Consensus 184 l~~~ 187 (438)
T PRK09952 184 ISMM 187 (438)
T ss_pred HHHh
Confidence 6543
No 198
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.26 E-value=8e-10 Score=104.60 Aligned_cols=168 Identities=13% Similarity=0.122 Sum_probs=122.1
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-----cchh-HHHHHHHHHHH
Q 013312 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAK-LLSLGLFAACI 325 (445)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~-~~~~~~~~~~~ 325 (445)
+..++............+|.|+++ .|+|.+++|++...... .+.. ++.|+++||+ |||| .+..+....++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~-~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFK-FLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHH-HHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 445566666777778899999998 59999999998665554 4556 7778999999 6665 67777888877
Q ss_pred HHHHHHhcC---CchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 013312 326 NMFICSISW---SAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK 401 (445)
Q Consensus 326 ~~~~~~~~~---~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~ 401 (445)
+...+.+.+ +.+.+... ++.+.......+...+++.|.+|+|+|+++.++......+|..+++.+.+.+.+...
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~-- 158 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVL-- 158 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhccc--
Confidence 777766653 23433333 455677777889999999999999999999999999999999999999988877421
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013312 402 GAPFNFPGFSIMCIGLASMVAFIQSLMMS 430 (445)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (445)
++.. .+.+.+++.++........+
T Consensus 159 ----gw~~-~f~i~a~~~l~~~l~~~~~~ 182 (402)
T PRK11902 159 ----GWGN-TYLLMAGLMLAGALTTLWAP 182 (402)
T ss_pred ----CHHH-HHHHHHHHHHHHHHHHHhcC
Confidence 2222 35555555554444434443
No 199
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.24 E-value=3.9e-10 Score=105.97 Aligned_cols=161 Identities=11% Similarity=0.112 Sum_probs=124.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
.++.+.+..++............|.+.+| .+.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.
T Consensus 206 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~ 277 (382)
T PRK11128 206 TVWRFLLCVSLLQGSHAAYYGFSAIYWQA--------AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSA 277 (382)
T ss_pred hHHHHHHHHHHHHHHhHhHHHHHHHHHHH--------CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 34444555555555555556666777643 2455567888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHH-HHHhhhhhhhhhhhhhh
Q 013312 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARFL 167 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~~ 167 (445)
+..+++.+..+..++ .+.+++..++.|+ +.+...+....++.+. +++++++..+..+ ...++|..+||.++|.+
T Consensus 278 ~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l 352 (382)
T PRK11128 278 ICGVVRWGLMGSTTA---LPWLIVIQILHCG-TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFL 352 (382)
T ss_pred HHHHHHHHHHHhhhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888888888 8888999999999 8888888889988887 5667788888886 55677888889888875
Q ss_pred ----chhhHHHHHHHHHHHH
Q 013312 168 ----STTSAFQAATIVSMLA 183 (445)
Q Consensus 168 ----~w~~~f~~~~~~~~i~ 183 (445)
++ ..|+..+.+.++.
T Consensus 353 ~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 353 YQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHhccH-HHHHHHHHHHHHH
Confidence 54 4566666555444
No 200
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.24 E-value=1.7e-08 Score=93.80 Aligned_cols=308 Identities=14% Similarity=0.068 Sum_probs=193.7
Q ss_pred HHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcC
Q 013312 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADN 136 (445)
Q Consensus 57 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~ 136 (445)
.++-.....+.+++.+.+.|+.|.|+.+.++...+..-.+.+-+-+. +.+++.-.+.|+ |.+..+...-.+++|.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~----y~~yfssallG~-Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNS----YYLYFSSALLGF-GAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcch----HHHHHHHHHhhh-hHHheecccceehhhc
Confidence 66677788888999999999999999999999999888877777665 778899999999 8899898899999999
Q ss_pred CCccchhhHHHHHHHHHhhhhhhhhhhhhhh------------chh-h----------HHHHHHHHHHHHHHHHHHhccC
Q 013312 137 ISERQRASAFGILLGVLSASFVCGTLAARFL------------STT-S----------AFQAATIVSMLAAAYMRVFLKD 193 (445)
Q Consensus 137 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~------------~w~-~----------~f~~~~~~~~i~~~~~~~~~~e 193 (445)
.+++++.+..++.-.....+.++|...-..+ +.+ . ...+.+++..+..+...-...+
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~ 210 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL 210 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec
Confidence 9999999999999988888888886554332 111 1 1111111111111111111111
Q ss_pred CCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHH
Q 013312 194 DVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL 273 (445)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (445)
+.+..... . +..+....+.++...+.+ +++++..+....+..+..........|..+
T Consensus 211 p~~~~~~~-------------------~---~~~~~~~~~~l~~~~~l~-~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i 267 (461)
T KOG3098|consen 211 PSKDVVNC-------------------K---SSSETSFSELLKLTFKLL-KTPKMLLLFPFFFYTGLETSFWISIYPTCI 267 (461)
T ss_pred Cccchhhh-------------------h---hhccccHHHHHHHHHHHh-cCHhHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 11000000 0 000011122334444444 455555555555544444444445555543
Q ss_pred Hh--hcCCchh-hHHHHHHHHHHHHHHHHHHHHHHhhh---hhcchhHHHHHHHHHHHHHHHHHhcCC------------
Q 013312 274 KA--QFHFNKN-QFADLMLIAGLAGTISQLLFMPLLAP---ILGEAKLLSLGLFAACINMFICSISWS------------ 335 (445)
Q Consensus 274 ~~--~~g~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 335 (445)
.- ..+.+.. ..+......+.+.++++ ...+.+.| ++|+++.+.++..+..++.++.....+
T Consensus 268 ~ft~~~~~n~~~~~ai~~~~~g~g~v~~g-~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~ 346 (461)
T KOG3098|consen 268 SFTRKLGSNTTYLIAIYSIGIGLGEVIGG-LDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPP 346 (461)
T ss_pred hhhhhccCcchhHHHHHHHHHhHHHHHHH-HHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccc
Confidence 22 1233332 34555566667777766 44456665 457788888888777777666544211
Q ss_pred ------c-hhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 336 ------A-WVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 336 ------~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 394 (445)
. ...++..+.|++........+.++.+.. +++|.++.++...-+.++..++-......
T Consensus 347 ~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 347 LLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred cccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 1 1222347778888888899999999988 58899999998888888887766555544
No 201
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.24 E-value=4.9e-10 Score=106.66 Aligned_cols=176 Identities=16% Similarity=0.216 Sum_probs=141.9
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCch--hHh
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK--AML 84 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr--~~l 84 (445)
.|.+...+++.++..-+.+.+......|.++ +++.+..+...+.-+..+...+++.++|++.||+|.| +++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~-------~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l 352 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATE-------VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTL 352 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 4566667777787777778788888888764 4566667777788888999999999999999999999 898
Q ss_pred HHHHHHHHHHHHHHHh--------hcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhh
Q 013312 85 TLPLTLSIIPLAILAY--------RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (445)
Q Consensus 85 ~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (445)
+.++..+.+..+...+ .++ .+.+.+.-++.|+ ..|..++...++.+|..|+++.+..+|++....-..
T Consensus 353 ~~~l~~~~~i~~~g~~G~~~~~~g~~~---~~~f~~~a~~~G~-~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~s 428 (477)
T PF11700_consen 353 LISLILWIIIPLYGLFGFWPSFFGLKS---PWEFWVLAVLIGL-FMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKAS 428 (477)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCccc---HHHHHHHHHHHHH-HhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 8888877555555444 445 6888889999999 889999999999999999999999999999999999
Q ss_pred hhhhhhhhhhh-----chhhHHHHHHHHHHHHHHHHHHhccCC
Q 013312 157 FVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDD 194 (445)
Q Consensus 157 ~~~g~~l~~~~-----~w~~~f~~~~~~~~i~~~~~~~~~~e~ 194 (445)
..+||.+.+.+ +.|+.+....++.++.+++. ..++++
T Consensus 429 s~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~ 470 (477)
T PF11700_consen 429 SWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVE 470 (477)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccch
Confidence 99999988875 36888887777765555444 555553
No 202
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.23 E-value=3.8e-10 Score=109.57 Aligned_cols=152 Identities=7% Similarity=-0.082 Sum_probs=111.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc---------CCc---hhHHHH-HH
Q 013312 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---------WSA---WVPYAT-TA 344 (445)
Q Consensus 278 g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~-~~ 344 (445)
+.++.+.++..+...++..+++ ++.|+++||+|||+.+..+..+..++.+..++. ++. +.++.. ++
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~-~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGG-ALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 8888999999999999999998 788999999999999999988888877766542 111 222333 77
Q ss_pred HHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCcccchhHHHHHHHHHHHHH
Q 013312 345 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG-APFNFPGFSIMCIGLASMVAF 423 (445)
Q Consensus 345 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 423 (445)
.|++.+...+...++++|.+|+++||++.++.+....+|..+++.+.+.+.....+.. ..+++.. .+.+.++..++..
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~-~f~~~~~~~~~~~ 208 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRY-MFASEAIPALLFL 208 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHH-HHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999988776655543211111 1123333 3555555555544
Q ss_pred HHHHhccC
Q 013312 424 IQSLMMSH 431 (445)
Q Consensus 424 ~~~~~~~~ 431 (445)
+..+.+++
T Consensus 209 ~~~~~l~~ 216 (479)
T PRK10077 209 MLLYFVPE 216 (479)
T ss_pred HHHHcCCC
Confidence 44444444
No 203
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.23 E-value=5.1e-10 Score=100.57 Aligned_cols=131 Identities=18% Similarity=0.113 Sum_probs=108.0
Q ss_pred HHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCch---hHHHH
Q 013312 266 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW---VPYAT 342 (445)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 342 (445)
..-+...+++.+|+|+.|.+++.++..+.+.+.+ +..+.+.||+|.|+....+.++..+-.+.+.++...+ .++.+
T Consensus 33 ~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallR-l~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~ 111 (417)
T COG2223 33 FSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLR-LPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVI 111 (417)
T ss_pred HHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHH-HHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHH
Confidence 3344445557799999999999999999999999 6668999999999999999999998888888866444 55554
Q ss_pred HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 343 TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.++....+..+......+++.+|+|++|.++|++. .+|+|..+...+.+.+....
T Consensus 112 gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 112 GLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 33333344567788889999999999999999998 99999999999999888876
No 204
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.22 E-value=1.5e-10 Score=114.64 Aligned_cols=137 Identities=13% Similarity=0.144 Sum_probs=113.1
Q ss_pred hhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC------
Q 013312 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW------ 334 (445)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 334 (445)
...++....-..+++++++++.+.|++.+...++..+.. +..+++.||.+||+.+.++.++.+++.+++++.+
T Consensus 47 ~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~-i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y 125 (633)
T TIGR00805 47 LYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLI-IFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRY 125 (633)
T ss_pred HHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHH-HHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCc
Confidence 333343333344556699999999999999999999988 6778999999999999999999999988877642
Q ss_pred -------------------------------------------C-ch-hHHHH-HHHHhhhhhhhhhHHHHHhcccCCcc
Q 013312 335 -------------------------------------------S-AW-VPYAT-TAFSVLVVFATPSFRSIVSKQVGPNE 368 (445)
Q Consensus 335 -------------------------------------------~-~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~ 368 (445)
+ .+ .+++. ++.|++.+...+...+++.|.+|+++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~ 205 (633)
T TIGR00805 126 SYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKN 205 (633)
T ss_pred cccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccc
Confidence 0 12 22233 77899999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 369 QGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 369 ~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
|+...|+.+....+|..+|+.+++.+.+.+
T Consensus 206 ~~~~~~i~~~~~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 206 SPLYIGILESIAVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHHHHhcc
Confidence 999999999999999999999999988764
No 205
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.22 E-value=1.1e-10 Score=92.60 Aligned_cols=133 Identities=18% Similarity=0.235 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCcc
Q 013312 290 IAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNE 368 (445)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~ 368 (445)
...++..++. +..+++.||++||+.+..+.....++.+.....++.+..... .+.+++.+...+....+..|..|+++
T Consensus 6 ~~~~~~~~~~-~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 6 GYALGQLIYS-PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred eehhHHHHHH-hhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 3456666777 777899999999999998888888888777777776655554 67788888888999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 369 QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 369 ~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
|+++.+..+....++..++|.+.+.+.+.. ++.. .+.+.+.+.+++.+......+
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFL-------GWRA-PFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhccc-------chHH-HHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999988754 2222 344555555555555544443
No 206
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.22 E-value=4.9e-10 Score=104.22 Aligned_cols=132 Identities=14% Similarity=0.114 Sum_probs=108.0
Q ss_pred hhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH
Q 013312 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT 342 (445)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (445)
......+|.+.++ +|.|+.+.++..+...++..++. +..|++.||+|+|+.+..+..+..++.+.. ..++.+.++..
T Consensus 17 ~~~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLA-PLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 3345567776665 89999999999999999999998 888999999999999999888877777665 55565555443
Q ss_pred -HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 343 -TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 343 -~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.+.|++.+...+.....+.|..| ++|+++.+..+....+|..+++.+.+.+.+..
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 149 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHS 149 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66678777777777778888776 68999999999999999999999999887764
No 207
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.21 E-value=1.7e-10 Score=111.52 Aligned_cols=121 Identities=12% Similarity=0.052 Sum_probs=105.1
Q ss_pred hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc--CCchhHHHH-HHHHhhhhhh
Q 013312 276 QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS--WSAWVPYAT-TAFSVLVVFA 352 (445)
Q Consensus 276 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~g~~~~~~ 352 (445)
++++++.+.|.+.+...++..+++ +..|++.||+|+|+.+..+.++..++.++..+. .+.+.++.. ++.|++.+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~ 148 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQ-IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSV 148 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHH-cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccc
Confidence 478999999999999999999998 788999999999999999888877776665443 344444443 7789999999
Q ss_pred hhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 353 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
.|....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~ 193 (465)
T TIGR00894 149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES 193 (465)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999998875
No 208
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.21 E-value=1.7e-09 Score=105.48 Aligned_cols=142 Identities=14% Similarity=0.018 Sum_probs=109.5
Q ss_pred HHHHHHhhhhhhHHHHHHHHHhh----cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHH
Q 013312 254 VAFFSGLSEGGMQASFLYFLKAQ----FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (445)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (445)
..+....-........|..-.+. .+.++.+.+++.+...++.+++. +..+++.||+|||+.+..+.++..++.++
T Consensus 24 ~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~-~~~g~l~d~~Grr~~~~~~~~~~~v~~~~ 102 (502)
T TIGR00887 24 GFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQ-LFFGWLADKLGRKRVYGMELIIMIIATVA 102 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 33444333333444445443321 23456677888999999999988 78899999999999999998888888877
Q ss_pred HHhcCC------chhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 330 CSISWS------AWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 330 ~~~~~~------~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
..+.++ .+.++.. ++.|++.+...+....+++|.+|+++||++.++.+....+|..+++.+...+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~ 176 (502)
T TIGR00887 103 SGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLA 176 (502)
T ss_pred HHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777654 2333343 777999999999999999999999999999999999999999999988877654
No 209
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.20 E-value=6.3e-09 Score=100.73 Aligned_cols=166 Identities=13% Similarity=0.089 Sum_probs=115.6
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHH-HHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHH
Q 013312 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQA-IIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (445)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s-~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 95 (445)
.++...+........+.+..+ +.+.+..+.|+... ...++..++.++.|+++||+|||+.+..+.++.+++.
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~-------~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIR-------GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 344444444444445555543 23566677888874 5568999999999999999999998877666555544
Q ss_pred HHH---Hhh-cCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh----h
Q 013312 96 AIL---AYR-RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----L 167 (445)
Q Consensus 96 ~~~---~~~-~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~----~ 167 (445)
+.. +.. ++ .+.+...-++..+ +.+...+...++..+..+++.+++..++.+...++|..+++.+++. .
T Consensus 304 l~~~~l~~~~~~---~~~l~~~~~l~~~-~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~ 379 (491)
T PRK11010 304 AGYWLLSITDKN---LYSMGAAVFFENL-CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH 379 (491)
T ss_pred HHHHHHHhcccc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 332 232 23 4555556666665 5555667778889999999999999999999999998777666655 4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCC
Q 013312 168 STTSAFQAATIVSMLAAAYMRVFLKDD 194 (445)
Q Consensus 168 ~w~~~f~~~~~~~~i~~~~~~~~~~e~ 194 (445)
||+..|.+.++++++..+... .++++
T Consensus 380 G~~~~f~~~~~~~l~~l~~~~-~~~~~ 405 (491)
T PRK11010 380 GWPTFYLFSVAAAVPGLLLLL-VCRQT 405 (491)
T ss_pred ChHHHHHHHHHHHHHHHHHHH-HHHhc
Confidence 899999988888877655554 34543
No 210
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.19 E-value=1.5e-09 Score=101.03 Aligned_cols=165 Identities=11% Similarity=0.097 Sum_probs=113.9
Q ss_pred hhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-----cchhH-HHHHHHHHHHHHHHHHhcCC--
Q 013312 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAKL-LSLGLFAACINMFICSISWS-- 335 (445)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~-- 335 (445)
......|.+.++ .|+|..+.|+.... .+...+ . ++.|++.||+ ||||. +..+.+..++....+.+..+
T Consensus 6 ~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~-~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 6 LVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-K-FLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred hHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-H-HHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 345567888877 79999999988654 444444 5 6778999997 78775 56667777776666666532
Q ss_pred -chhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHH
Q 013312 336 -AWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIM 413 (445)
Q Consensus 336 -~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~ 413 (445)
.+.+... .+.+.+.....+...+++.|.+|+|+|+++.|+......+|..+++.+.+.+.++.+.....-+.....+.
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 2223222 44566677778889999999999999999999999999999999999999998876321100011223456
Q ss_pred HHHHHHHHHHHHHHhccCC
Q 013312 414 CIGLASMVAFIQSLMMSHT 432 (445)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~ 432 (445)
+.+++.++.....++..|+
T Consensus 162 i~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 162 WTALLILPGLLVTLFLAKE 180 (356)
T ss_pred HHHHHHHHHHHHHHHhccC
Confidence 6666666655555544343
No 211
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.19 E-value=7.1e-10 Score=102.00 Aligned_cols=181 Identities=15% Similarity=0.186 Sum_probs=148.0
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcC----CchhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchhHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH----FNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSL 318 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~ 318 (445)
++|.++.++..-+.--++++++...+..|+....+ +|++++.-++..++...-... +++||++|| +|+|+.+..
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~-i~GG~laDr~LG~~~tI~l 97 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTP-IIGGWLADRVLGTRRTIVL 97 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHH-HHHHHHHHHhcchhHHHHH
Confidence 45677788888899999999999999999988888 999987777777766666655 888999998 599999999
Q ss_pred HHHHHHHHHHHHHhcC--CchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCc--cchhHHHHHHHHHHHHHHHHHHHHHH
Q 013312 319 GLFAACINMFICSISW--SAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPN--EQGKAQGCISGISSFANIVSPLIFSP 393 (445)
Q Consensus 319 ~~~~~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~i~~~~~g~ 393 (445)
|.++..++.+.++..+ ....+++ ..+..+|.|..-+...+++.|.+|++ +|-..+++..+..++|+.++|.+.++
T Consensus 98 Gail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~ 177 (498)
T COG3104 98 GAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGL 177 (498)
T ss_pred HHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHH
Confidence 9999999999998874 4444444 46677999999999999999999865 36778888889999999999999999
Q ss_pred HHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCC
Q 013312 394 LTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 433 (445)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (445)
+.++. ++. ..|..+++-...+++..+..+++.
T Consensus 178 ~~~~~-------g~~-~gF~~aavGm~~gl~~f~~~~r~~ 209 (498)
T COG3104 178 LAINY-------GWH-VGFGLAAVGMIIGLVIFLLGRRHV 209 (498)
T ss_pred HHHhh-------CHH-HHHHHHHHHHHHHHHHHHHccchh
Confidence 99986 333 347777777788888777766543
No 212
>PTZ00207 hypothetical protein; Provisional
Probab=99.19 E-value=3.7e-09 Score=102.32 Aligned_cols=129 Identities=8% Similarity=0.088 Sum_probs=97.8
Q ss_pred hhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc------CCch
Q 013312 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS------WSAW 337 (445)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 337 (445)
.+..+.| .+++.+|+|..+.+.+.+.... ..... +..|++.||+|+|+++.++.++..++.++.++. .+.+
T Consensus 45 ~fsv~s~-~L~~~lgls~~~l~~i~svg~~-~g~~~-lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~ 121 (591)
T PTZ00207 45 AFNLISG-AMQARYNLTQRDLSTITTVGIA-VGYFL-LPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVV 121 (591)
T ss_pred HHHHHHH-HHHHHhCcCHHHHHHHHHHHHH-HHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHH
Confidence 3444444 4566699999999988776333 33444 467999999999999999999999999888886 3455
Q ss_pred hHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 338 VPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 338 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
.+.+. .+.|++.+...+.....+.+.+| ++||++.|+......+|..+.+.+...+..
T Consensus 122 ~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 122 RLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444 66688887778888888888887 789999999999999999865555544443
No 213
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.18 E-value=1.3e-09 Score=117.42 Aligned_cols=154 Identities=12% Similarity=0.112 Sum_probs=116.8
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCch--hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHH
Q 013312 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK--NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (445)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (445)
++++.++.+++..++..+........+..++...++.+. ...++..+...+...+++ +..|+++||+|||+++..+.
T Consensus 6 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~G~l~Dr~grk~~l~~~~ 84 (1146)
T PRK08633 6 LKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLS-SPAGFLADKFSKNRVIRIVK 84 (1146)
T ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHh-hhHhhhcccccHHHHHHHHH
Confidence 345566666666666666665555555555544455543 346777888888888888 77899999999999998887
Q ss_pred HHHHHHHHHHH---hcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 321 FAACINMFICS---ISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 321 ~~~~~~~~~~~---~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
++..+..++.. ...+.+.+++. ++.|++.+...+...+++.|.+|+++|++++|+.+....+|..+||.+++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66554444333 23455555544 777899999999999999999999999999999999999999999999999987
Q ss_pred h
Q 013312 397 L 397 (445)
Q Consensus 397 ~ 397 (445)
.
T Consensus 165 ~ 165 (1146)
T PRK08633 165 S 165 (1146)
T ss_pred h
Confidence 6
No 214
>PRK15075 citrate-proton symporter; Provisional
Probab=99.18 E-value=1.6e-09 Score=103.54 Aligned_cols=147 Identities=14% Similarity=0.038 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHH-HHH-----HHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLM-LIA-----GLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~-~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (445)
....++..++...-...+....|...++ ++.++.+.+... +.. .+...+++ +..|++.||+|||+.+..+..
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~-~~~G~l~Dr~Grr~~l~~~~~ 94 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGA-IVLGAYIDRVGRRKGLIVTLS 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHH-HHHHHHhhhhchHHHHHHHHH
Confidence 3334555555555555666666665555 788777654332 221 11223455 677999999999999999999
Q ss_pred HHHHHHHHHHhcCCchh--------HHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 013312 322 AACINMFICSISWSAWV--------PYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 392 (445)
Q Consensus 322 ~~~~~~~~~~~~~~~~~--------~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 392 (445)
+..++..+.++.++.+. ++.. ++.|++.+...+....++.|.+|+++|+++.++.+...+++..+++.+.+
T Consensus 95 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~ 174 (434)
T PRK15075 95 IMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGY 174 (434)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988887653 2233 67788888888888899999999999999999999999999888888877
Q ss_pred HHHH
Q 013312 393 PLTA 396 (445)
Q Consensus 393 ~l~~ 396 (445)
.+..
T Consensus 175 ~l~~ 178 (434)
T PRK15075 175 LLNQ 178 (434)
T ss_pred HHHH
Confidence 7654
No 215
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.15 E-value=3.7e-08 Score=90.00 Aligned_cols=323 Identities=15% Similarity=0.100 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHH
Q 013312 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (445)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~ 132 (445)
.|.+.-+..+...+..+...+..+|+..+.=...+..+..++.++.+++++ .+.=+++-.+.++ +.|..-....++
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~---v~~~l~Gv~las~-ssg~GE~tfL~l 136 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPS---VWVRLLGVVLASL-SSGLGEVTFLSL 136 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccc---hhHHHHHHHHHhh-hhhhhHHHHHHH
Confidence 355666677788888888888999988765566677788889999999999 8888889999998 777666666665
Q ss_pred HhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh---h--chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCcccc
Q 013312 133 VADNISERQRASAFGILLGVLSASFVCGTLAARF---L--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPI 207 (445)
Q Consensus 133 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~---~--~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~ 207 (445)
.. .+++ ...+.++.+.+.+.++|+..-.. + +-|..+.+...+.++..+..++.+|+++++.... +.+..
T Consensus 137 t~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~-~~~~~ 210 (402)
T PF02487_consen 137 TH-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQ-ESESE 210 (402)
T ss_pred HH-hcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCc-ccCCC
Confidence 44 4443 24566666666666666543322 2 3477777777666555555555666543322111 11000
Q ss_pred chhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhh-HHHHHHHH-HhhcCCchhhHH
Q 013312 208 ITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGM-QASFLYFL-KAQFHFNKNQFA 285 (445)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~g~~~~~~g 285 (445)
+.. +++..+++.++ .+.....+...++.++.. |.+....+-.++..+..+.+ ....|... .+...-...+.-
T Consensus 211 -~~~-~~~~~~~~~~~-~~~~~~~~~~~~~k~~~~---k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~ 284 (402)
T PF02487_consen 211 -DEA-EDDLLESETSE-SKPDSSSKLSFKEKLKRL---KPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYR 284 (402)
T ss_pred -Ccc-ccccccccccc-ccccccchhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHH
Confidence 000 00000000000 001111112223322222 21221222222233333333 22223322 111122233455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHH---HHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHh
Q 013312 286 DLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI---CSISWSAWVPYAT-TAFSVLVVFATPSFRSIVS 361 (445)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ 361 (445)
++...+.++..+.+ -....+ |+++.+++.+-..+-.+.+++ +-+.++.|.++.. +..|+..|..+......+.
T Consensus 285 ~Y~~~YQ~GVFISR-SS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~ 361 (402)
T PF02487_consen 285 WYQLLYQLGVFISR-SSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRIS 361 (402)
T ss_pred HHHHHHHHHHhhhh-cceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 66666776665554 111111 333333332222222222211 2224556655543 5568888999998899999
Q ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 362 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 362 ~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 394 (445)
|..|+++|-.++|.......+|..++..++=++
T Consensus 362 ~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 362 EEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred hcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999999999998888877655433
No 216
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.15 E-value=2.5e-09 Score=114.89 Aligned_cols=155 Identities=15% Similarity=0.052 Sum_probs=106.5
Q ss_pred hcchhhHHHHHHHHHHHhhhhhhHHHHHHH----HHhhcCCc-hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHH
Q 013312 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYF----LKAQFHFN-KNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (445)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (445)
++++.++.++...++..+..+.....++.+ +.+..+.+ ....++..+...+...+.+ ++.|+++||++||+++.
T Consensus 8 ~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~-~~~G~laDr~~rk~~~~ 86 (1140)
T PRK06814 8 MKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFS-ALAGQLADKYDKAKLAK 86 (1140)
T ss_pred hhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHh-hhHHhhhhhccHHHHHH
Confidence 344556656666666555544332222222 22212222 2346777777888888888 78899999999999753
Q ss_pred HHHH--HHHHHHHHH-HhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 013312 318 LGLF--AACINMFIC-SISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (445)
Q Consensus 318 ~~~~--~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 393 (445)
.... +.......+ ...++.+.+++. ++.|++.+...|...+++.+.+|++++++++|+.++...+|..+||.++|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~ 166 (1140)
T PRK06814 87 ILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGL 166 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3211 121122222 223566666654 777999999999999999999999999999999999999999999999999
Q ss_pred HHHhh
Q 013312 394 LTALF 398 (445)
Q Consensus 394 l~~~~ 398 (445)
+.+..
T Consensus 167 l~~~~ 171 (1140)
T PRK06814 167 ATISG 171 (1140)
T ss_pred HHhcc
Confidence 98864
No 217
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.14 E-value=4.2e-09 Score=99.76 Aligned_cols=184 Identities=11% Similarity=0.024 Sum_probs=129.6
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhh----hhcchhHHHH-HHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP----ILGEAKLLSL-GLFA 322 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~-~~~~ 322 (445)
+..+....+..++++.....+.+.|+++ +|.++...+.+.....+...+.+ ++.|+++| |+|||+.... +...
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~-Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQ-PLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-hHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 3344555566667777778888888866 89999999999999999999999 78899999 5999998766 4666
Q ss_pred HHHHHHHHHhcCCch-----------------hHHH-HHHHHhhhhhhhhhHHHHHhcccCCccc--hhHHHHHHHHHHH
Q 013312 323 ACINMFICSISWSAW-----------------VPYA-TTAFSVLVVFATPSFRSIVSKQVGPNEQ--GKAQGCISGISSF 382 (445)
Q Consensus 323 ~~~~~~~~~~~~~~~-----------------~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~ 382 (445)
..+++.++.+..+.+ .... ..+..++.....+...+++.|.+|+++| +.+.+..+....+
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l 163 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI 163 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH
Confidence 666767776654421 1111 1334557777788889999999998865 6799999999999
Q ss_pred HHHHHHHHHHHH--HHhhh--cCCC-Cc--ccchhHHHHHHHHHHHHHHHHHhccCCC
Q 013312 383 ANIVSPLIFSPL--TALFL--SKGA-PF--NFPGFSIMCIGLASMVAFIQSLMMSHTP 433 (445)
Q Consensus 383 g~~i~~~~~g~l--~~~~~--~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (445)
|+.+|+.+.+.. .+.+. +.+. .. ......|.+.+++.+++.......-||+
T Consensus 164 G~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 164 GNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 999999988865 22211 0000 00 0122346777777777776666554443
No 218
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.14 E-value=3.5e-09 Score=98.91 Aligned_cols=176 Identities=14% Similarity=0.184 Sum_probs=138.0
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (445)
+.+...++..++...+...+....+.+.+|.. +.+....|.+.++..+.-...-...+++..|+|.|+++.++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~g-------g~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a 279 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELG-------GYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLA 279 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 34556667778888888888889999987641 13334567777788888888889999999999999999999
Q ss_pred HHHHHHHHHHHHhh-cCcchhHHH----HHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHH-Hhhhhhhhh
Q 013312 88 LTLSIIPLAILAYR-RSISFFYAY----YALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV-LSASFVCGT 161 (445)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~~~~l----~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~ 161 (445)
.+.+++=..+++.. ++ .+.. +....+.|+ +-+..+.+...++.+..|++.|+++.++++.. .++|..+|.
T Consensus 280 ~~~~~vR~~l~a~~~~~---~~~~~~~~~l~q~lhG~-tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~ 355 (400)
T PF03825_consen 280 LVAYAVRWLLYAYFSDP---WPFIVALQLLGQLLHGL-TFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGS 355 (400)
T ss_pred HHHHHHHHHHHHHhcCC---cHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999988 44 3332 333567999 88999999999999999999999999998864 689999999
Q ss_pred hhhhhh----------chhhHHHHHHHHHHHHHHHHHHhccCC
Q 013312 162 LAARFL----------STTSAFQAATIVSMLAAAYMRVFLKDD 194 (445)
Q Consensus 162 ~l~~~~----------~w~~~f~~~~~~~~i~~~~~~~~~~e~ 194 (445)
.++|.+ .|...+.+.+.+.++..++.++..||+
T Consensus 356 ~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 356 LIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 988874 344556667766666666666666664
No 219
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.13 E-value=2.1e-09 Score=101.32 Aligned_cols=164 Identities=10% Similarity=0.010 Sum_probs=116.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHH-HHHHhhhhccccccccCchhHhHHHH
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
++......++...+........+.+.+| .+.+..+.|++...... ...++.++.|++.||+|+|+.+..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~--------~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD--------AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh--------cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4444555556666666666677777754 36666788988887764 66677899999999999999998877
Q ss_pred HHHHHHHHHHHh------hcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCc-cchhhHHHHHHHHHhhhhhhhh
Q 013312 89 TLSIIPLAILAY------RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLGVLSASFVCGT 161 (445)
Q Consensus 89 ~~~~~~~~~~~~------~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~ 161 (445)
...++....... .++ ...+.....+.++ +.+...+...+...+..++ +++++.++..+...++|..+||
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~ 357 (390)
T TIGR02718 282 GLAGSLALLWFAQAAFWLAPG---IAVAWSCSAFGSL-ITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIAS 357 (390)
T ss_pred HHHHHHHHHHHHHHHcccCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHH
Confidence 665333332221 122 3444555556666 6667777777887777776 7899999999999999999999
Q ss_pred hhhhh----hchhhHHHHHHHHHHHHHH
Q 013312 162 LAARF----LSTTSAFQAATIVSMLAAA 185 (445)
Q Consensus 162 ~l~~~----~~w~~~f~~~~~~~~i~~~ 185 (445)
.+++. .|++..|.+.+++.++..+
T Consensus 358 ~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 358 SIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99886 3788888888776655543
No 220
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.12 E-value=5.4e-09 Score=96.04 Aligned_cols=182 Identities=11% Similarity=0.065 Sum_probs=141.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~ 87 (445)
|.+|.+.+........++......|.|..+.. ++.+.+....|++.+...+.-.+.-.+..++.+|+|.|+.++++
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f----~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Llla 295 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF----QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLA 295 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHH
Confidence 34444444333333344555555777776643 44466667899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHH-HHHHhhhhhhhhhhhhh
Q 013312 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGIL-LGVLSASFVCGTLAARF 166 (445)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~l~~~ 166 (445)
..+.++=.++++++++ .+.+.+.+.+.|+ .-+....+...|+++.+|+|..++...+. +.+.++|..+.+.++|.
T Consensus 296 g~i~~iRi~~~~~~~~---~~~i~~~klLH~~-e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 296 GVIMAIRIIGSGFATN---PWVISLIKLLHAL-EFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGY 371 (412)
T ss_dssp HHHHHHHHHHHHT--S---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcc---hHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence 9999999999999999 9999999999999 88899999999999999988877777774 56778888887777776
Q ss_pred ----hchhhHHHHHHHHHHHHHHHHHHhccCCCCC
Q 013312 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (445)
Q Consensus 167 ----~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~ 197 (445)
+|.+..|++.+.+.+...++..+.++++++.
T Consensus 372 lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 372 LYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred hHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 4788899999988888888888888876543
No 221
>TIGR00898 2A0119 cation transport protein.
Probab=99.12 E-value=2e-09 Score=105.22 Aligned_cols=135 Identities=18% Similarity=0.152 Sum_probs=104.6
Q ss_pred HHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCC
Q 013312 59 IIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS 138 (445)
Q Consensus 59 ~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~ 138 (445)
...+....+.++.++++||+|||+.+..+.++.+++.++..+.++.. .+...+.-++.++ +.+...+....+..|.+|
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDL-YFLRTALAVLGKF-GITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCc-hHHHHHHHHHHHH-HHHHHHHHHHHHhccccc
Confidence 44566677888899999999999999999999999888888876521 2444455556666 556667788899999999
Q ss_pred ccchhhHHHHHHHHHhhhhhhhhhhhhh--hchhhHHHHHHHHHHHHHHHHHHhccCCCC
Q 013312 139 ERQRASAFGILLGVLSASFVCGTLAARF--LSTTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (445)
Q Consensus 139 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~--~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~ 196 (445)
++.|++++|+.+....+|.+++|.+.+. .++..++.+.+...++..+.. +++||+..
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lpet~~ 499 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILT-LFLPETKG 499 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCcCCCC
Confidence 9999999999999999999999998873 245667777776666655444 56787654
No 222
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=99.11 E-value=3.8e-09 Score=91.91 Aligned_cols=354 Identities=15% Similarity=0.089 Sum_probs=216.6
Q ss_pred HHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhh
Q 013312 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRAS 144 (445)
Q Consensus 65 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~ 144 (445)
.+.-.+.=.+.|..-.||+++.-.+.......+..+.++ .+.+-+..+..|. ..+.. .+.++++-+..+++++.+
T Consensus 56 Lv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~s---V~~mQvlE~FyG~-~tAaE-IAYysYIYs~Vd~~~Yqr 130 (433)
T KOG3810|consen 56 LVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPS---VKAMQVLEFFYGP-ATAAE-IAYYSYIYSKVDPEMYKR 130 (433)
T ss_pred HHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCC---chheeeehhhcCh-HHHHH-HhhhheeeeecCHHHHHH
Confidence 444444555889999999999988888888888999999 8999999999998 65555 589999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhh------chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccC
Q 013312 145 AFGILLGVLSASFVCGTLAARFL------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQN 218 (445)
Q Consensus 145 ~~~~~~~~~~~g~~~g~~l~~~~------~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (445)
+.+...++.-.|...|..++..+ +....-.+......++.++ ..++|..++..-.+.+.++.. ..+.
T Consensus 131 vt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~-A~fLP~v~rSl~f~~~~~~~~------v~~~ 203 (433)
T KOG3810|consen 131 VTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLL-ALFLPRVKRSLYFHRLEDKIS------VGDL 203 (433)
T ss_pred HHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHH-HhhCCCCchhhhhhcccccce------eccc
Confidence 99999999988888888887764 3333333433332333333 356776553211111110000 0000
Q ss_pred CCCCCcccccc---cccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCc-hhhHHHHHHHHHHH
Q 013312 219 ESNSPVKIPVC---KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN-KNQFADLMLIAGLA 294 (445)
Q Consensus 219 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~g~~~~~~~~~ 294 (445)
++..++.+... .....+.+-+....++|.+..-.+=..+...+++....+.....++...-+ ....|..-++..+.
T Consensus 204 e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlL 283 (433)
T KOG3810|consen 204 EEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLL 283 (433)
T ss_pred hhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHH
Confidence 01011000000 000011111223445666555444445555555555555555555532111 11234555666667
Q ss_pred HHHHHHHHHHHhhhhhcch--hHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchh
Q 013312 295 GTISQLLFMPLLAPILGEA--KLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGK 371 (445)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 371 (445)
++++. +..|.+.-++.|. .++.++....+...+++....+.|..+.. .++........+.....+++....|.-|-
T Consensus 284 Ga~~~-~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gL 362 (433)
T KOG3810|consen 284 GAIAA-LAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGL 362 (433)
T ss_pred HHHHH-HHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhhee
Confidence 77776 6667775544443 34556666666667777777888888886 66777777778888888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh---hcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCCC
Q 013312 372 AQGCISGISSFANIVSPLIFSPLTALF---LSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 434 (445)
Q Consensus 372 ~~g~~~~~~~~g~~i~~~~~g~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (445)
.+|++....-+-+.+-..+ +.|.- .+....+...+..|++.+.+.+++....+...++.+
T Consensus 363 vFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~~~ 425 (433)
T KOG3810|consen 363 VFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCRRNK 425 (433)
T ss_pred eeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999888776655554433 23421 122233344555688888888887666555444443
No 223
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.11 E-value=8.6e-10 Score=97.35 Aligned_cols=117 Identities=14% Similarity=0.041 Sum_probs=99.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhH
Q 013312 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSF 356 (445)
Q Consensus 278 g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 356 (445)
+.+....|++-+.+++...+.+ ...|.++||+|||.++.+|.+..++..++.+.+.+...+... ++.|+..+ .....
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS-~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~ 141 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISS-PLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVI 141 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhh-hhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHH
Confidence 3455567888899999999998 777999999999999999999999999998888887444443 45555544 45677
Q ss_pred HHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 357 RSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 357 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
.++++|.+++|+|+.+++.++....+|.++||.++|++..
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 8999999999999999999999999999999999999988
No 224
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.07 E-value=4.5e-09 Score=100.77 Aligned_cols=168 Identities=15% Similarity=0.210 Sum_probs=117.2
Q ss_pred HHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh----hcchh-HHHHHHHHHHHHHHHHH
Q 013312 257 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAK-LLSLGLFAACINMFICS 331 (445)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~-~~~~~~~~~~~~~~~~~ 331 (445)
..+........+++.|+.+.+|.++.+.|.+.+...+...+.. ++.|+++|| +|||| .+..+....+++.+.+.
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~-p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITD-PIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcc-chheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 3445556667888899998899999999999999999999999 778999997 56644 56677777777777666
Q ss_pred hcCCch------hHH-HHHHHHhhhhhhhhhHHHHHhccc-CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 013312 332 ISWSAW------VPY-ATTAFSVLVVFATPSFRSIVSKQV-GPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 403 (445)
Q Consensus 332 ~~~~~~------~~~-~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~ 403 (445)
..++.+ ... ...+++.+.+.......++..|.. ++++|++..+..+....+|..+++.+.+.+....++...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~ 168 (437)
T TIGR00792 89 TTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDD 168 (437)
T ss_pred hCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 554321 111 124456666666777778888876 468899999999999999999988888888765432111
Q ss_pred CcccchhHHHHHHHHHHHHHHHH
Q 013312 404 PFNFPGFSIMCIGLASMVAFIQS 426 (445)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~ 426 (445)
..++.. .+.+.+++.++.....
T Consensus 169 ~~g~~~-~~~i~~~l~~~~~~~~ 190 (437)
T TIGR00792 169 KFGWFM-FALVLALIGVVSLIIC 190 (437)
T ss_pred cccHHH-HHHHHHHHHHHHHHHH
Confidence 222222 3444444444444443
No 225
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.07 E-value=2.6e-09 Score=96.21 Aligned_cols=176 Identities=13% Similarity=0.172 Sum_probs=138.2
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
++.+...+++.++..=+.+-+...-..+.. .+++++..+..+..-...+..+++++++|++.||+|.|+++..
T Consensus 251 ~~~i~~FLiA~~~~~DGv~til~~~~~fg~-------~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~ 323 (438)
T COG2270 251 RKNLVLFLIARFFYIDGVNTILAMGGVFGA-------ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI 323 (438)
T ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHHH-------HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH
Confidence 445666666666665555555555555643 5678888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
+.++..+.++..-+... -..+.+.-.+.|. ..|..+....++.++.+|++|-++.+|+++...-.+..+||.+-+.
T Consensus 324 ~lvi~~~~~~~~~~~~~---~~~f~i~gll~g~-s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 324 GLVILSIAALYLIFLEG---ELDFWILGLLVGT-SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred HHHHHHHHHHHHHHccc---cHHHHHHHHHHHH-hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH
Confidence 99999988888777776 5666777888898 7888889999999999999999999999999999999999998877
Q ss_pred h-----chhhHHHHHHHHHHHHHHHHHHhccCC
Q 013312 167 L-----STTSAFQAATIVSMLAAAYMRVFLKDD 194 (445)
Q Consensus 167 ~-----~w~~~f~~~~~~~~i~~~~~~~~~~e~ 194 (445)
+ +-|..+....++..+.+ .....+|++
T Consensus 400 ~t~iTg~~r~g~~~i~vll~iGl-~~L~~v~~~ 431 (438)
T COG2270 400 ITQITGSSRAGVLSIIVLLLIGL-LLLLRVKVP 431 (438)
T ss_pred HHHHhcchhhHHHHHHHHHHhhH-hhEEeecCC
Confidence 5 34666665555543333 333455543
No 226
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.01 E-value=4.2e-09 Score=99.67 Aligned_cols=150 Identities=11% Similarity=0.109 Sum_probs=125.1
Q ss_pred hhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC--CchhHHHH-HHHHhhhhh
Q 013312 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW--SAWVPYAT-TAFSVLVVF 351 (445)
Q Consensus 275 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~g~~~~~ 351 (445)
..+++++.+-+++++....+.+++. +.++++.||+|.|+++..+.++.++..++..++. +.+.++++ ++.|++.+.
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~-iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQ-IPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHH-cCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 4588999999999999999999999 7779999999999999999999999988887754 34444445 888999999
Q ss_pred hhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcCCCCcccchhHHHHHHHHHHHHHHHHHhcc
Q 013312 352 ATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL-FLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 430 (445)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (445)
.+|....+..+-.|+++|++..++.....++|.+++-++.|.+.+. . ||....++...+..+...++.+...
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~-------GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSL-------GWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC-------CCchHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999987 4 6666645555445555555555554
Q ss_pred CC
Q 013312 431 HT 432 (445)
Q Consensus 431 ~~ 432 (445)
++
T Consensus 218 d~ 219 (466)
T KOG2532|consen 218 DS 219 (466)
T ss_pred CC
Confidence 43
No 227
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.01 E-value=5.2e-08 Score=87.32 Aligned_cols=134 Identities=15% Similarity=0.073 Sum_probs=113.3
Q ss_pred hhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCC--chhHH
Q 013312 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS--AWVPY 340 (445)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 340 (445)
...+..+.+.+++.++.+..+++.+......+..+.+ +..+++.||+|+|+-+..|..+.+++..++.-+.+ .+...
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~-lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~F 107 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMS-LPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFF 107 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHh-ccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 3345555666777799999999999999999988888 77799999999999999999999999988764432 23333
Q ss_pred H--HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 341 A--TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 341 ~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
+ .++.+.|.+......+.++....|++....-+.+.+.++.+|+.++|.+.+.+..+
T Consensus 108 L~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils 166 (422)
T COG0738 108 LVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS 166 (422)
T ss_pred HHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 3 36678889999999999999999999999999999999999999999999999874
No 228
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.99 E-value=8.9e-09 Score=98.75 Aligned_cols=172 Identities=18% Similarity=0.281 Sum_probs=145.0
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccC--chhHhH
Q 013312 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG--RKAMLT 85 (445)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G--rr~~l~ 85 (445)
+.+..+.+...+..++.......+|.+.++ .+.+..+...+.++..+...++.+..|+++|+.. ++.+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~--------~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~ 369 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKS--------LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFL 369 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHH
Confidence 456667777888888888888888888754 3455577889999999999999999999999988 556677
Q ss_pred HHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhh
Q 013312 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (445)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (445)
++++..+++...+.+.++ ++.+...-.+.|+ +.|.........+.|..+.++-+.++|+.....+++.++||.+++
T Consensus 370 ~~ll~~gl~~~~~p~~~~---~~~l~~~~~~fG~-~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag 445 (509)
T KOG2504|consen 370 LTLLIAGLARLFLPFATT---YVGLIVFSILFGF-CVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAG 445 (509)
T ss_pred HHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccce
Confidence 888889999999999999 9999999999999 888887777779999999999999999999999999999999998
Q ss_pred hh-----chhhHHHHHHHHHHHHHHHHHHhcc
Q 013312 166 FL-----STTSAFQAATIVSMLAAAYMRVFLK 192 (445)
Q Consensus 166 ~~-----~w~~~f~~~~~~~~i~~~~~~~~~~ 192 (445)
.+ +|...|+.+++..++..... +..|
T Consensus 446 ~~~d~tg~Y~~~f~~~g~~~~~s~~~~-~~~~ 476 (509)
T KOG2504|consen 446 LLYDITGNYDHAFYFCGLCFLLSAVLL-LILR 476 (509)
T ss_pred eeeeccCCeeeehhhcChHHHHHHHHH-HHhH
Confidence 75 48888998887766655443 4444
No 229
>PRK09848 glucuronide transporter; Provisional
Probab=98.98 E-value=3.4e-09 Score=101.88 Aligned_cols=151 Identities=11% Similarity=0.086 Sum_probs=112.0
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
+|.+....+..++............|.+.++. .+.+....++......++..++.+++++++||+|+|+++..
T Consensus 227 n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~ 299 (448)
T PRK09848 227 NRPLFMLCIGALCVLISTFAVSASSLFYVRYV-------LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (448)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhheeeEeee-------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 34455556666666666666656666665432 23344444454555567788899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccc-------hhhHHHHHHHHHhhhhhh
Q 013312 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ-------RASAFGILLGVLSASFVC 159 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~-------r~~~~~~~~~~~~~g~~~ 159 (445)
+.++.+++.+...+.++.+ ++.+++..++.|+ +.+...+...++.+|..|++| +|..++..+....+|..+
T Consensus 300 g~~~~~i~~~~~~~~~~~~-~~~~~~~~~l~g~-G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ai 377 (448)
T PRK09848 300 GALLGTCGYLLFFWVSVWS-LPVALVALAIASI-GQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAI 377 (448)
T ss_pred HHHHHHHHHHHHHHcCchh-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHH
Confidence 9998888887777754221 6667777888999 888888999999999987643 588899999999999999
Q ss_pred hhhhhhh
Q 013312 160 GTLAARF 166 (445)
Q Consensus 160 g~~l~~~ 166 (445)
|+.+.+.
T Consensus 378 g~~i~g~ 384 (448)
T PRK09848 378 GGSIPAF 384 (448)
T ss_pred HHHHHHH
Confidence 8877665
No 230
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.95 E-value=4.2e-08 Score=88.94 Aligned_cols=157 Identities=11% Similarity=0.018 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
.++...+..|+.......+...++.|++|. ...+.+..+.++..+.+..+..++.+..+++.||+|+|+.+..+.
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~-----~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~ 215 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDP-----HALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA 215 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 344444555554445666667778888642 335677788999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh-
Q 013312 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~- 167 (445)
.+..++.++....++ ... ...-++.|+ +.+..+|...+...+..|++ .+++.++. ....+|..++|.+.|.+
T Consensus 216 ~l~~~~~~l~~~~~~---~~~-~~~~~l~g~-~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 216 FLAVLLSIGAALTHG---YVA-MWFVLALGL-FNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred HHHHHHHHHHHHcCC---HHH-HHHHHHHHH-HHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 888887766666554 322 235557888 88889999999998888753 45566665 45668889999876664
Q ss_pred ---chhhHHHHHH
Q 013312 168 ---STTSAFQAAT 177 (445)
Q Consensus 168 ---~w~~~f~~~~ 177 (445)
+.+..|++..
T Consensus 289 d~~g~~~a~~v~~ 301 (310)
T TIGR01272 289 DCLGIQLAFALPV 301 (310)
T ss_pred HhccchHHHHHHH
Confidence 5567776444
No 231
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.95 E-value=3.5e-08 Score=95.38 Aligned_cols=146 Identities=15% Similarity=0.189 Sum_probs=109.2
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhh----hhcc-hhHHHHHHHHHHHH
Q 013312 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP----ILGE-AKLLSLGLFAACIN 326 (445)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~~~-~~~~~~~~~~~~~~ 326 (445)
.+..+..++.......+++.|+.+..|.++..+|.++.+.-+...+.. ++.|+++| |+|| |+.+..+....+++
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~d-p~~G~lsD~t~sr~Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAIND-PIMGWIVNNTRSRWGKFKPWILIGTLANSVV 90 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhh-chheeehhcCCCCCCCcchhHhhhhHHHHHH
Confidence 344455566677778889999999999999999999999999999998 77799999 4587 55666777777777
Q ss_pred HHHHHhcCCc-------hhHHHHHHHHhhhhhhhhhHHHHHhccc-CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 327 MFICSISWSA-------WVPYATTAFSVLVVFATPSFRSIVSKQV-GPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 327 ~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+.++...++. |......++..+.........++..|.. ++++|.+..+......++|+.+.+.+...+.+..
T Consensus 91 ~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~ 170 (473)
T PRK10429 91 LFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYV 170 (473)
T ss_pred HHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6555443311 1111124456777778888889999988 5789999999888888888778777666665544
No 232
>PRK09669 putative symporter YagG; Provisional
Probab=98.94 E-value=2.1e-08 Score=96.26 Aligned_cols=144 Identities=12% Similarity=0.125 Sum_probs=105.7
Q ss_pred HHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh----hcc-hhHHHHHHHHHHHHHH
Q 013312 254 VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGE-AKLLSLGLFAACINMF 328 (445)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~----~~~-~~~~~~~~~~~~~~~~ 328 (445)
..+..+........+++.|+.+.+|+|+..+|.++.+..+...+.. ++.|+++|| +|| |+.+..+.+..+++..
T Consensus 17 g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~d-p~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 17 GDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTD-PLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHccc-ceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 3344455556667889999999999999999999999999999999 778999998 555 4556666666666665
Q ss_pred HHHhcCCc------hhHHH-HHHHHhhhhhhhhhHHHHHhccc-CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 329 ICSISWSA------WVPYA-TTAFSVLVVFATPSFRSIVSKQV-GPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 329 ~~~~~~~~------~~~~~-~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
+....++. +.... ..+++.+.........++..|.. ++++|++..+.......+|..+++.+...+....
T Consensus 96 l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~ 173 (444)
T PRK09669 96 LTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDIL 173 (444)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54444321 11111 24455566666777778888877 4578999999999999999999988877777655
No 233
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.92 E-value=4.5e-08 Score=83.10 Aligned_cols=148 Identities=17% Similarity=0.196 Sum_probs=115.1
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
+..+|.+...++..+....-...+-|.+.+ +.+++|+...+-+.+......++.+|+.|.++||+|++..++.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~-------~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~ 335 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQ-------KRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVA 335 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHH-------HhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHH
Confidence 456788888888888877666666666665 4567777778888888888889999999999999999988887
Q ss_pred HHHHHHH-HHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhh
Q 013312 87 PLTLSII-PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (445)
Q Consensus 87 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 165 (445)
+..+..+ +.....++. +.=+++..+.|+ +....-.+....++...|+++.|++.|..+...++|..+.|++++
T Consensus 336 ~a~~~tl~~H~~l~Ft~-----lsPy~~m~~lGL-sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag 409 (459)
T KOG4686|consen 336 SACILTLLGHSGLFFTF-----LSPYTSMTFLGL-SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAG 409 (459)
T ss_pred HHHHHHHHHhhhHHhhh-----ccHHHHHHHHhh-hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhh
Confidence 6655444 444433332 222466778888 666665557778899999999999999999999999999999998
Q ss_pred hh
Q 013312 166 FL 167 (445)
Q Consensus 166 ~~ 167 (445)
.+
T Consensus 410 ~i 411 (459)
T KOG4686|consen 410 FI 411 (459)
T ss_pred ee
Confidence 75
No 234
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.89 E-value=8.7e-08 Score=92.42 Aligned_cols=123 Identities=16% Similarity=0.135 Sum_probs=90.5
Q ss_pred HHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHH
Q 013312 267 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAF 345 (445)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 345 (445)
..++...+| .|-++. ..++.....+...+.. .+.|+++|.+|||+.++.+.++..++.++.+.+++...++.. .+.
T Consensus 65 ~~l~~I~~d-iG~~~~-~~w~~~~~~l~~av~~-~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~ 141 (599)
T PF06609_consen 65 SILPYINAD-IGGSDN-WSWFSTAWTLASAVSF-PFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLY 141 (599)
T ss_pred HHHHHHHHh-cCCCcc-chHHHHHHHHHHHHHH-HhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHH
Confidence 334444444 676654 4777888888888877 777999999999999999999999999999999988777775 777
Q ss_pred HhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 013312 346 SVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (445)
Q Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 393 (445)
|++.+... .....++|..|.+.|+...++.....-.....+|.+...
T Consensus 142 GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~ 188 (599)
T PF06609_consen 142 GVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQL 188 (599)
T ss_pred HHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHH
Confidence 88766554 445568999999999877766554443333344444433
No 235
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.88 E-value=9.8e-07 Score=78.23 Aligned_cols=350 Identities=12% Similarity=-0.001 Sum_probs=198.3
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccc-----ccCch
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-----QYGRK 81 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Grr 81 (445)
++.+..+.....+..+..++.. .+|.+++.. +.|-+..+...-+ ... ...-+.|.++.| |+|||
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak--------~vSyt~~a~fS~a-y~P-~sLKllWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK--------GVSYTSQAIFSFA-YWP-FSLKLLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC--------Ccchhhhhhhhhh-hhH-HHHHHHHHhhhHHHHHHhhccc
Confidence 4456666677777888888888 889988631 2222333331111 111 223467889999 99999
Q ss_pred hHhHH-HHHHHHHHHHHHHhhcCc------ch--hHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHH
Q 013312 82 AMLTL-PLTLSIIPLAILAYRRSI------SF--FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV 152 (445)
Q Consensus 82 ~~l~~-~~~~~~~~~~~~~~~~~~------~~--~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 152 (445)
|..++ +..+.+..+...+.-.+. .. ...+....++.-+ .++....+...+.-....+++.+.+..-...+
T Consensus 99 ksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnf-laAtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 99 KSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNF-LAATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred cceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHH-HHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 98664 334433333333332111 00 2233334455666 66788888999999999999988888877777
Q ss_pred Hhhhhhhhhhhhhhh-----------ch---------hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhh
Q 013312 153 LSASFVCGTLAARFL-----------ST---------TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEET 212 (445)
Q Consensus 153 ~~~g~~~g~~l~~~~-----------~w---------~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 212 (445)
.+.|..+|..+--.+ +| ..-.++.+.+..+.-.+..+.-+|+++...++
T Consensus 178 ~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e----------- 246 (510)
T KOG3574|consen 178 QTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEE----------- 246 (510)
T ss_pred HhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhh-----------
Confidence 777777664332111 22 11233444444444444434333332221110
Q ss_pred cccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHH
Q 013312 213 EGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAG 292 (445)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~ 292 (445)
.........+- ++...+-|.+..+.......-.++.+.....+.-+.| .|.+..+.+.+....-
T Consensus 247 --------------~~~~i~~~yk~-l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~ 310 (510)
T KOG3574|consen 247 --------------LELGIHESYKL-LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLV 310 (510)
T ss_pred --------------hhcCHHHHHHH-HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehh
Confidence 11111112222 2233445566666777777778888888888888888 6999998776654444
Q ss_pred HHHHHHHHHHHHHhhh-h-----hcchhHHHHHHHHHHHHHHHHHhcCC-------ch-hHHH--H---HHHHhhhhhhh
Q 013312 293 LAGTISQLLFMPLLAP-I-----LGEAKLLSLGLFAACINMFICSISWS-------AW-VPYA--T---TAFSVLVVFAT 353 (445)
Q Consensus 293 ~~~~~~~~~~~~~l~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~--~---~~~g~~~~~~~ 353 (445)
-..++.. ...|++.. + +-|+....+....... .+....++ .. ..++ + .+.+......+
T Consensus 311 plqI~l~-~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t--~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~f 387 (510)
T KOG3574|consen 311 PLQIALP-LYIGKWTAGPRPLNVFLKAVPYRLGGGLVQT--ALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMF 387 (510)
T ss_pred hHHHhhh-hhheeecCCCCcchHHHHhhhHHHHHHHHHH--HHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHH
Confidence 4444444 22233322 1 1111122222222222 22222111 10 1111 1 23344444456
Q ss_pred hhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
....+..++..||...|+.+.+.|+..++|+-.-..+..++.|.+
T Consensus 388 v~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 388 VSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 666777899999999999999999999999999989999998865
No 236
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.85 E-value=4.8e-08 Score=93.27 Aligned_cols=148 Identities=18% Similarity=0.184 Sum_probs=123.9
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH
Q 013312 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (445)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 86 (445)
+|.+..++...++..++..+.....+.+.++.++.+ ...+.+..+..++..++.+++++++||+|+|+.+..
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~--------~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~ 295 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE--------GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYII 295 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc--------hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhh
Confidence 466777888888888998888888888888754221 245677778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhc--CcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCcc-------chhhHHHHHHHHHhhhh
Q 013312 87 PLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER-------QRASAFGILLGVLSASF 157 (445)
Q Consensus 87 ~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~ 157 (445)
+..+.+++.++..+.+ | .+.+++.-++.|+ +.+..++...++++|..+.+ +.|..++..+....+|.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~---~~~~~i~~~l~gi-~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 296 GLLLAALGFLLLFFLGPGS---PWLVLILFILAGI-GYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred hHHHHHHHHHHHHHHHhhh---HHHHHHHHHHhHh-hhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHH
Confidence 9999999999988886 6 8999999999999 88888899999999999843 34777888888888888
Q ss_pred hhhhhhhhh
Q 013312 158 VCGTLAARF 166 (445)
Q Consensus 158 ~~g~~l~~~ 166 (445)
.+++.+.+.
T Consensus 372 ~la~~i~g~ 380 (428)
T PF13347_consen 372 GLAGAIVGL 380 (428)
T ss_pred HHHHHHHHH
Confidence 888776654
No 237
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.83 E-value=5.5e-08 Score=81.81 Aligned_cols=299 Identities=11% Similarity=0.037 Sum_probs=157.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHH
Q 013312 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSIN 126 (445)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~ 126 (445)
+....++|.+.-+..-..++...+.|.++||-|||+.-+.-. +..+++........+-.++++|.+.|+ +.+..+
T Consensus 68 gFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtyc----itYiLsCiTKhSpqYkVLmVGR~LGGi-aTsLLF 142 (454)
T KOG4332|consen 68 GFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC----ITYILSCITKHSPQYKVLMVGRVLGGI-ATSLLF 142 (454)
T ss_pred CccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeeh----HHHHHHHHhhcCCceEEEeehhhhhhH-HHHHHH
Confidence 333455677776777777888889999999999999755444 444444444333338899999999999 777777
Q ss_pred HHHHHHH-hcCCCccchhhHHHHHHHHHh----hhh----hhhhh----hhhh--hchhhHHHHHHHHHHHHHHHHHHhc
Q 013312 127 CLALAYV-ADNISERQRASAFGILLGVLS----ASF----VCGTL----AARF--LSTTSAFQAATIVSMLAAAYMRVFL 191 (445)
Q Consensus 127 ~~~~~~i-~~~~~~~~r~~~~~~~~~~~~----~g~----~~g~~----l~~~--~~w~~~f~~~~~~~~i~~~~~~~~~ 191 (445)
.+..++. .|.. ++|+.-.-+....++ +|. +++.+ +... +|--.+|-..+.+..+...+....-
T Consensus 143 SaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W 220 (454)
T KOG4332|consen 143 SAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSW 220 (454)
T ss_pred HHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhh
Confidence 6666654 4544 233332222222221 222 22222 2222 2445677665555444444333333
Q ss_pred cCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhh-HHHHH
Q 013312 192 KDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGM-QASFL 270 (445)
Q Consensus 192 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 270 (445)
.|+..++.+.+ .-....+...+.+..++++..+-....+.-...+.+ ..|-|
T Consensus 221 ~ENygdps~~k---------------------------dlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTP 273 (454)
T KOG4332|consen 221 SENYGDPSENK---------------------------DLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 273 (454)
T ss_pred hhccCChhhhH---------------------------HHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecc
Confidence 33322211110 000122222333444454433333332222222222 22223
Q ss_pred HHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc--hhHHHHHHHHHHHHHHHHHhc----CC---ch-hHH
Q 013312 271 YFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE--AKLLSLGLFAACINMFICSIS----WS---AW-VPY 340 (445)
Q Consensus 271 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~---~~-~~~ 340 (445)
..-.+.-+. --|.+++......++++.+. .++..|-.. ...+.+.+.+....+.+.... ++ +. .++
T Consensus 274 aLspn~e~i---PhGfiFatFMlASmLGSSla-~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i 349 (454)
T KOG4332|consen 274 ALSPNDEEI---PHGFIFATFMLASMLGSSLA-SRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLI 349 (454)
T ss_pred cCCCCcccC---CchhHHHHHHHHHHHhhHHH-HHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHH
Confidence 222111121 23788888888888888444 455544333 234444444444443332221 11 11 223
Q ss_pred HHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHH
Q 013312 341 ATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 383 (445)
Q Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 383 (445)
...++-...|..+|...-+-++..|++.|++.+-.+..--++-
T Consensus 350 ~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnif 392 (454)
T KOG4332|consen 350 GFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIF 392 (454)
T ss_pred HHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHh
Confidence 3355667888899999999999999999988877665544443
No 238
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.83 E-value=1.2e-07 Score=89.11 Aligned_cols=152 Identities=16% Similarity=0.132 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcch-----h-HHHHHHHHHhhhc
Q 013312 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISF-----F-YAYYALRTLTAMV 120 (445)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-----~-~~l~~~r~l~G~~ 120 (445)
+++....-++.........+..++...+.||+|||+.++.+..+..+..+++........ . +..+++.++..++
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~ 380 (485)
T KOG0569|consen 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIIS 380 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 555556667777778888899999999999999999999999998888777765432111 1 1223344443331
Q ss_pred cchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhh----hhhhhhhchhhHHHHHHHHHHHHHHHHHHhccCCCC
Q 013312 121 CEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG----TLAARFLSTTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (445)
Q Consensus 121 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g----~~l~~~~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~ 196 (445)
-+-+..|...-+.+|.+|++.|+.++++.....-+...+- |.+...+|- ..|.+..+.+++..++.++.+||++.
T Consensus 381 f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 381 FAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred hhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 2222347888999999999999999999887776655432 455555666 77777788888888999999999875
Q ss_pred CCC
Q 013312 197 NDD 199 (445)
Q Consensus 197 ~~~ 199 (445)
+..
T Consensus 460 r~~ 462 (485)
T KOG0569|consen 460 RTP 462 (485)
T ss_pred CCH
Confidence 443
No 239
>PRK11462 putative transporter; Provisional
Probab=98.81 E-value=2.4e-07 Score=89.05 Aligned_cols=146 Identities=16% Similarity=0.178 Sum_probs=110.6
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh----hcch-hHHHHHHHHHHHHH
Q 013312 253 VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEA-KLLSLGLFAACINM 327 (445)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~----~~~~-~~~~~~~~~~~~~~ 327 (445)
+..+..+........++..|+.+..|.++..+|.++.+.-+.-.+.- ++.|+++|| +||| +.+..+.+..+++.
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~D-p~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~ 94 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISD-PCMGLLADRTRSRWGKFRPWVLFGALPFGIVC 94 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHh-hhheehhccCCCCCCCcchhHhHHHHHHHHHH
Confidence 34444555666677889999999999999999999999999999998 777999996 4664 45566767777776
Q ss_pred HHHHhcCC--ch--hHHH---HHHHHhhhhhhhhhHHHHHhcccC-CccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013312 328 FICSISWS--AW--VPYA---TTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 399 (445)
Q Consensus 328 ~~~~~~~~--~~--~~~~---~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 399 (445)
.++...++ .. ..+. ..++..+.........++..|..+ +++|++..+.......+|..+++.+...+.+..+
T Consensus 95 ~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g 174 (460)
T PRK11462 95 VLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIG 174 (460)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 65554432 11 1122 245677777778888888888876 6889999999999999999999888877776654
No 240
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.81 E-value=1.1e-06 Score=86.82 Aligned_cols=139 Identities=17% Similarity=0.119 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccccc-cCchhHhHHHHHHHHHHHHHHHhhcCc-----chhHHHHHHHHHhhhccch
Q 013312 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSI-----SFFYAYYALRTLTAMVCEG 123 (445)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~g 123 (445)
......+...+....-+...++|.++|+ +||++.+.++.++..++..+.++.... ......+++-.+..+ |.|
T Consensus 22 ~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~-G~G 100 (654)
T TIGR00926 22 ESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL-GTG 100 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh-hcc
Confidence 3444555666666667778889999996 599999999999999999888775321 112335566666666 778
Q ss_pred hHHHHHHHHHhcCCCcc---chhhHHHHHHHHHhhhhhhhhhhhhhh-----------chhhHHHHHHHHHHHHHHHHHH
Q 013312 124 SINCLALAYVADNISER---QRASAFGILLGVLSASFVCGTLAARFL-----------STTSAFQAATIVSMLAAAYMRV 189 (445)
Q Consensus 124 ~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~l~~~~-----------~w~~~f~~~~~~~~i~~~~~~~ 189 (445)
..-|...+...|.++++ +|.+.+.++..+.++|..+++.+...+ +|...|.+.++..++..+....
T Consensus 101 giKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 101 GIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred ccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999864 366778888888899998887665543 4888998888887766655443
No 241
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.80 E-value=3.1e-07 Score=83.41 Aligned_cols=162 Identities=23% Similarity=0.309 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHH
Q 013312 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (445)
Q Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~ 92 (445)
.....+....+.....+..+.+..+... +. . . ...++..+.+.++..++.++.|.++||+|||+.+..+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 80 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSL---SS-G-R-LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFL 80 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCC---Cc-h-h-HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHH
Confidence 3444455556677777777777765311 11 0 0 467889999999999999999999999999988888887666
Q ss_pred HHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCc-cchhhHHHHHHH-HHhhhhhhhhhhhhhh---
Q 013312 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLG-VLSASFVCGTLAARFL--- 167 (445)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~l~~~~--- 167 (445)
++.+...+..+ ...+.+++.|+.+|+ +.+...+...+++.|+.|+ ++|+...+.... ...+|..++|.+++.+
T Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 81 LGTLLLALAPN-VGLALLLILRLLQGL-GGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHhCcc-chHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666655 337899999999999 8888889999999999998 688999998888 5788888888776653
Q ss_pred ---chhhHHHHHHHHHHH
Q 013312 168 ---STTSAFQAATIVSML 182 (445)
Q Consensus 168 ---~w~~~f~~~~~~~~i 182 (445)
+||..|.........
T Consensus 159 ~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 159 LLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HhcchHHHHHHHHHHHHH
Confidence 688877666655433
No 242
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.79 E-value=5.4e-07 Score=88.05 Aligned_cols=112 Identities=15% Similarity=0.050 Sum_probs=99.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHh
Q 013312 283 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVS 361 (445)
Q Consensus 283 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ 361 (445)
+.+++.+...++..++. +..|+++|++|||+.+..+.+...++.++.+++.+.+.+... ++.|+|.+........+.+
T Consensus 90 ~~s~~~s~~~lga~~g~-l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGS-LLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 44899999999999999 888999999999999999999999999999999988888887 8889999999999999999
Q ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 362 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 362 ~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
|..|++.||...+..+....+|..++ .+.+...+
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~ 202 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTS 202 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhc
Confidence 99999999999999999999888777 44444443
No 243
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.73 E-value=1e-07 Score=88.22 Aligned_cols=163 Identities=17% Similarity=0.218 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHH
Q 013312 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (445)
Q Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~ 92 (445)
+++..++...+.+.+...+-..++|. +......|........+-.+.-++.+++.+|+|+-+++..++.+..
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHled~--------~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~ 447 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLEDL--------GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNV 447 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhc--------CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHH
Confidence 34455556666677777776666553 3334566777777788888888999999999999999999999999
Q ss_pred HHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHH-hhhhhhhhhhhhh----h
Q 013312 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVL-SASFVCGTLAARF----L 167 (445)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~-~~g~~~g~~l~~~----~ 167 (445)
+=.+..++.+| .|..+...+++|+ ..+..+.+..+|+++..||+-|..+.++.+... ++|--+|.++|+. +
T Consensus 448 ~Rf~~~S~L~n---~W~vLPieilqgi-t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f 523 (618)
T KOG3762|consen 448 GRFLYYSYLQN---PWMVLPIEILQGI-THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF 523 (618)
T ss_pred HHHHHHHHhcC---chheeeHHHHHHH-HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee
Confidence 99999999999 9999999999999 999999999999999999999999999988654 6677777777766 5
Q ss_pred chhhHHHHHHHHHHHHHHHH
Q 013312 168 STTSAFQAATIVSMLAAAYM 187 (445)
Q Consensus 168 ~w~~~f~~~~~~~~i~~~~~ 187 (445)
+-|..|.+.++.+++.+++.
T Consensus 524 g~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 524 GARTTFRIFGIACLVTLALF 543 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 77888888777666554443
No 244
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.73 E-value=1.2e-06 Score=75.46 Aligned_cols=155 Identities=12% Similarity=0.197 Sum_probs=102.5
Q ss_pred HHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC-------CchhHH
Q 013312 268 SFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW-------SAWVPY 340 (445)
Q Consensus 268 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 340 (445)
.....+++.+|+|.++...+-....++..+ + +..|.+.|++|++..+.+|.....++...+...- +.|.+.
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~ 100 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-G-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC 100 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-c-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH
Confidence 344556677999999999988888888876 4 6679999999999999999999999988776532 233333
Q ss_pred HH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHH
Q 013312 341 AT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLAS 419 (445)
Q Consensus 341 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (445)
+. .+.+.+.............+.+| ++||++.|+.-....+++.+-..+...+++. + ......+......
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~----~----~~~fll~la~~~~ 171 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD----D----PSSFLLFLAVLPA 171 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC----C----hHHHHHHHHHHHH
Confidence 22 23334444444555555567888 6899999999999987777666555444432 1 1222233333344
Q ss_pred HHHHHHHHhccCCC
Q 013312 420 MVAFIQSLMMSHTP 433 (445)
Q Consensus 420 ~~~~~~~~~~~~~~ 433 (445)
+++++....+++.+
T Consensus 172 ~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 172 VVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHhhheeccC
Confidence 44555555555543
No 245
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.73 E-value=1.1e-05 Score=72.19 Aligned_cols=150 Identities=15% Similarity=0.005 Sum_probs=102.6
Q ss_pred hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhh
Q 013312 276 QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATP 354 (445)
Q Consensus 276 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~ 354 (445)
.+|++..+++.++......+.+.+ .+.|.++||+|||+.-+...++..++.+..- .++.+.+++. ++.|++....+.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g-~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~~~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFG-TFVGSLADRYGRKKACLLFCILYSLSCLTKH-SSNYPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHH
Confidence 489999999999998888888888 6779999999999998888888888876533 4556666665 777888888888
Q ss_pred hHHHHH-h----cccCCccchhHHHHHHH-HHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHh
Q 013312 355 SFRSIV-S----KQVGPNEQGKAQGCISG-ISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 428 (445)
Q Consensus 355 ~~~~~~-~----~~~~~~~~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (445)
..-++. . +-+|++..+..++.... .+.+-.+++..++-++.+..+ . .+..+|.....+.+++.+....
T Consensus 141 ~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~-~-----g~vaPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 141 AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG-F-----GPVAPFDAAIVLLAVAAVLILK 214 (354)
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC-C-----CCcchHHHHHHHHHHHHHHHHh
Confidence 887775 2 23455555666665552 234444555555555555541 1 1233567676666666666655
Q ss_pred ccCCC
Q 013312 429 MSHTP 433 (445)
Q Consensus 429 ~~~~~ 433 (445)
..+|+
T Consensus 215 ~W~EN 219 (354)
T PF05631_consen 215 TWPEN 219 (354)
T ss_pred ccccc
Confidence 44444
No 246
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=3e-07 Score=90.24 Aligned_cols=122 Identities=14% Similarity=0.051 Sum_probs=109.5
Q ss_pred hhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhh
Q 013312 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFAT 353 (445)
Q Consensus 275 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~ 353 (445)
+..+.+.....+..+...++..+|. ++.|.++||+|||+++..+.++..++.+..+++++.+.+... ++.|++.+...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~-~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGS-LIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHH-hhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 3356677777888888889999988 778999999999999999999999999999999999988887 88899999999
Q ss_pred hhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.....+..|.+++++|+.+..+ ......++.+++...+++...+
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~W 233 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDW 233 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhH
Confidence 9999999999999999999999 8888889999999999888743
No 247
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.68 E-value=1.3e-06 Score=81.53 Aligned_cols=181 Identities=14% Similarity=0.244 Sum_probs=132.0
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh----cc-hhHHHHHHHHHHH
Q 013312 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL----GE-AKLLSLGLFAACI 325 (445)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~----~~-~~~~~~~~~~~~~ 325 (445)
.-...+..++.+.....++..|..|+.|.++..+|.++.+.=+.-++.- ++.|.+.||. || |+.++.+.+..++
T Consensus 17 Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~D-P~~G~i~D~t~~r~GrfRP~lL~g~ip~~i 95 (467)
T COG2211 17 YGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITD-PIMGFIVDRTRSRWGRFRPWLLWGAIPFAI 95 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhc-chheeeecccccccccccHHHHHHhHHHHH
Confidence 3445566667777888999999999999999999999999999999998 7779999964 44 4466677676666
Q ss_pred HHHHHHhcCC-----chhH--HHHHHHHhhhhhhhhhHHHHHhcccC-CccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 326 NMFICSISWS-----AWVP--YATTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 326 ~~~~~~~~~~-----~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
...++...++ .+.. +.-.+++++.........++..+..+ +++|.+..+.-+....+|..+...+.+.+...
T Consensus 96 ~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~ 175 (467)
T COG2211 96 VAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKL 175 (467)
T ss_pred HHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666665552 1222 22367788888888888888877764 57999999999999999999999999999998
Q ss_pred hhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCC
Q 013312 398 FLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 433 (445)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (445)
.++.+...++... ..+.+++..+..++.++--||+
T Consensus 176 ~g~~~~~~g~~~~-~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 176 FGGGDKALGYQGT-ALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred hCCCcchhhHHHH-HHHHHHHHHHHHHHHHHHhhcc
Confidence 8665444443333 3334444444455555444443
No 248
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.67 E-value=9.9e-07 Score=84.03 Aligned_cols=154 Identities=19% Similarity=0.097 Sum_probs=118.0
Q ss_pred hhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhh
Q 013312 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFAT 353 (445)
Q Consensus 275 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~ 353 (445)
+..+....+.+...+...++.+++. +..+.+.||++..+.+....++..+..++....++.+.+++. ++.|+..+..+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~-~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQ-FPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGW 152 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHH-hhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccc
Confidence 4467888899999999999999999 788999999996666655555554444444446677777665 88999999999
Q ss_pred hhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
|....++...+.+++||..+|+......+|+++|+.+...+...- +.....+|.. .|++-+++.+...+..++.-|
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~-~~~~~~gW~~-~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLN-GSGGLAGWRW-LFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhc-CCCCcCCcee-ehhHHHHHHHHHHheEEEEec
Confidence 999999999999999999999999999999999999998877632 2222223333 467777666666555544433
No 249
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.67 E-value=1.2e-05 Score=74.47 Aligned_cols=374 Identities=11% Similarity=0.039 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccc-----ccCchhHhHH
Q 013312 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-----QYGRKAMLTL 86 (445)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Grr~~l~~ 86 (445)
.+.+..++.++..++....+|.++++. .-+.|-.+.|... .....+- .-++|.++.| |+||||..++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~------~~~~sy~q~~~fS-la~~PfS-lKlLWaPiVDs~y~~~~GRRKSWii 75 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSM------AKKVSYSQQAIFS-LASYPFS-LKLLWAPIVDSVYSKRIGRRKSWII 75 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccc------cCCCChhHheeee-eeechhH-HHHhhhhhhhhhcccccCCcchhhh
Confidence 455566677777777777788888751 1122333333311 1111111 1234555555 8999998776
Q ss_pred HH-HHHHHHHHHHHhhc---------------Cc-ch-----hHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhh
Q 013312 87 PL-TLSIIPLAILAYRR---------------SI-SF-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRAS 144 (445)
Q Consensus 87 ~~-~~~~~~~~~~~~~~---------------~~-~~-----~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~ 144 (445)
-. .+.++..+..+... +. +. ...+....++.=+ -.+....+...+.-....+++++.
T Consensus 76 P~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~f-l~ATQDIAVDGWALT~Ls~~n~~~ 154 (544)
T PF13000_consen 76 PIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVF-LCATQDIAVDGWALTMLSPENVGY 154 (544)
T ss_pred HHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHH-HHccCCceeehhhhhhcChhhcch
Confidence 43 34444333333222 00 00 1122233323333 345566677777777778888888
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhc-------h-------------hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCc
Q 013312 145 AFGILLGVLSASFVCGTLAARFLS-------T-------------TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLT 204 (445)
Q Consensus 145 ~~~~~~~~~~~g~~~g~~l~~~~~-------w-------------~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~ 204 (445)
+..-...+.+.|..++-.+--.++ | ..-..+.+...++..++..++-+|.+..+... +.
T Consensus 155 ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~-~~ 233 (544)
T PF13000_consen 155 ASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLP-KI 233 (544)
T ss_pred HHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCc-cc
Confidence 777766666666666543321110 0 11122334444444455545556654322211 11
Q ss_pred cccchhhhcccccCCCCCCcc----cccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCc
Q 013312 205 RPIITEETEGVNQNESNSPVK----IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN 280 (445)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 280 (445)
+...+...+..+...+.++.. ++....++..+..++.+ |-|.+..+.+..+..-+++..-......-+.| .|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~il-kLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~ 311 (544)
T PF13000_consen 234 EPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKIL-KLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLS 311 (544)
T ss_pred cccccccccccccceecccccccchhhhhhHHHHHHHHHHHH-cCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCC
Confidence 110000000000000000000 00011122344444443 55667777778888888888887777777777 6999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc---------------------------hhHHHHHHHHHHHHH----HH
Q 013312 281 KNQFADLMLIAGLAGTISQLLFMPLLAPILGE---------------------------AKLLSLGLFAACINM----FI 329 (445)
Q Consensus 281 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------------------~~~~~~~~~~~~~~~----~~ 329 (445)
.++.+.+..+..-..++.. ...++.+.--.+ -+....++..-.+.. ..
T Consensus 312 KE~LAl~~li~~P~qii~~-~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~i 390 (544)
T PF13000_consen 312 KEDLALLVLIDFPFQIILP-YYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLI 390 (544)
T ss_pred HHHhHHHHHHhhhHHHHHH-HHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHhe
Confidence 9997776655554555544 333333321111 011112222111111 11
Q ss_pred HHhcC--C---chhHHH---H-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 330 CSISW--S---AWVPYA---T-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 330 ~~~~~--~---~~~~~~---~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
....+ . .+.+.+ . .+..+.....+....+.-++..+|..=|+.+.+.|+..++|+-.-..+.=++.|.+
T Consensus 391 V~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 391 VYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred EEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 11122 1 111111 1 33345555567777888899999999999999999999999988888888888865
No 250
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.67 E-value=1.8e-06 Score=83.14 Aligned_cols=172 Identities=12% Similarity=0.095 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----chhHHHHHHHHH
Q 013312 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG-----EAKLLSLGLFAA 323 (445)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~ 323 (445)
......++..+.. +......+.++++.+|.|+.+++.+.+...+...+-. + .|.++||++ ||+.+..+.++.
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l-~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKP-F-AGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-H-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence 3344456666666 6667778888888899999999999999999988844 4 789999996 666666666655
Q ss_pred -HHHHHHHHhcCCchhHH--HHHHHHhhhhhhhhhHHHHHhcccCCccchh---HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 324 -CINMFICSISWSAWVPY--ATTAFSVLVVFATPSFRSIVSKQVGPNEQGK---AQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 324 -~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~---~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
.+....+...++..... ..++.+++.+........+..|..+ |+++. ..+.......+|..+++.+.|.+.+.
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~ 184 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK 184 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh
Confidence 24433333333322222 2355677778888888999999888 55544 34444445568999999999999987
Q ss_pred hhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCC
Q 013312 398 FLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 432 (445)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (445)
. ++.. .+.+.+.+.++........+++
T Consensus 185 ~-------~~~~-~f~~~a~l~ll~~~~~~~~~E~ 211 (468)
T TIGR00788 185 T-------LTRI-LFLITAALLLLQLFVSNLSKER 211 (468)
T ss_pred c-------Ccch-HHHHHHHHHHHHHHHHHhcccc
Confidence 5 3333 3455555555554444555543
No 251
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.64 E-value=7.2e-06 Score=70.67 Aligned_cols=120 Identities=18% Similarity=0.125 Sum_probs=93.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcc----hhHHHHHHHHHhhh
Q 013312 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSIS----FFYAYYALRTLTAM 119 (445)
Q Consensus 44 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~ 119 (445)
++++.+..+...+.++..+|..+ .++.|.+.||+|.|.++.++.+...+|......+-+.. .+|.+.+..++.|.
T Consensus 30 ~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~ 108 (250)
T PF06813_consen 30 SRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGN 108 (250)
T ss_pred HHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcc
Confidence 45566667788888888899876 58889999999999999999999999988887652211 27777777788877
Q ss_pred ccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 120 VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 120 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
+.+....+......+.+| ++||++.|+.-...+++..+=..+...
T Consensus 109 -s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~ 153 (250)
T PF06813_consen 109 -SSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSA 153 (250)
T ss_pred -cHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHH
Confidence 666666666666678887 689999999999999987665544443
No 252
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.60 E-value=2.9e-06 Score=75.24 Aligned_cols=167 Identities=17% Similarity=0.134 Sum_probs=122.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccccc-CchhHhHHHH
Q 013312 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPL 88 (445)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~ 88 (445)
-|.+.+-.-+.....+....-+|.+..|. +.|..+.|.+.+...+.+...++....+++|. ++|+......
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~~--------G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILIDR--------GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHc--------CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 34444444455566677778888888653 77778899999999999999999999999965 6677888888
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccch-hhHHHHHHHHHhhhhhhhhhhhhhh
Q 013312 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQR-ASAFGILLGVLSASFVCGTLAARFL 167 (445)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (445)
....++...+.+.+....+ ..-++.|+ +.|..+|.....+.+..++.++ ++..++.+....+=..+||.+.|++
T Consensus 282 ~~~l~G~~G~~~~P~~~~~----lw~~llG~-G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLPI----LWALLLGL-GQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHHHHHHHHHhhhhHHH----HHHHHHhC-ccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 8899999888888873322 22489999 8888889999999998875443 3444444444444446689998886
Q ss_pred -----chhhHHHHHHHHHHHHHHHHHH
Q 013312 168 -----STTSAFQAATIVSMLAAAYMRV 189 (445)
Q Consensus 168 -----~w~~~f~~~~~~~~i~~~~~~~ 189 (445)
+|+......+...++..+..+.
T Consensus 357 hDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 357 HDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 7888887777666555554433
No 253
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.59 E-value=0.00052 Score=65.53 Aligned_cols=246 Identities=12% Similarity=0.122 Sum_probs=146.3
Q ss_pred HHHHHHHHHHH-HHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhh--cCcch----------------------
Q 013312 52 LSGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR--RSISF---------------------- 106 (445)
Q Consensus 52 ~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~---------------------- 106 (445)
.+.++-....+ ...+......+++||++|.+++-+....+.....++++. |+.+.
T Consensus 59 ~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i 138 (491)
T PF03219_consen 59 VIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFI 138 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHH
Confidence 34444443333 345556779999999999999887777666666655543 11100
Q ss_pred ----hHHHHHHHHHhhhccchhHHH-HHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhhc-------------
Q 013312 107 ----FYAYYALRTLTAMVCEGSINC-LALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS------------- 168 (445)
Q Consensus 107 ----~~~l~~~r~l~G~~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~------------- 168 (445)
.|...+..+..-+ -+....+ .-..+.+|.++.+|-.|..+++..+.++|.++++.+...+.
T Consensus 139 ~~~~~Wt~slfYv~aEl-wgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~ 217 (491)
T PF03219_consen 139 AMFRNWTFSLFYVMAEL-WGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDA 217 (491)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccc
Confidence 1222233333333 2222222 46788999999999999999999999999998876655432
Q ss_pred hhhHHH-HHHHHH--HHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcc
Q 013312 169 TTSAFQ-AATIVS--MLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (445)
Q Consensus 169 w~~~f~-~~~~~~--~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (445)
|..... +..++. .+........+.+...++++. ..+..+++.++.+.+.++.++.+.++
T Consensus 218 ~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~------------------~~~~~~~kk~k~k~s~~es~k~l~kS 279 (491)
T PF03219_consen 218 WELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRF------------------YPSAKKKKKKKPKMSLKESFKLLLKS 279 (491)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcccc------------------chhhhcccccCCCccHHHHHHHHHhC
Confidence 322221 111111 111122222333221111110 00011222334445778888889999
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhh----HHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ----FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (445)
|.+..+.+....++......+...-..+++.+. |+.+ .|......++..++.. ++++.+.+|+|-+....+
T Consensus 280 ~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~-~l~~~iir~~GW~~~Ali 354 (491)
T PF03219_consen 280 KYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMM-FLSSNIIRRFGWRTAALI 354 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHH
Confidence 999988888888888877777766667766443 3333 2445566677777766 777899999997765544
No 254
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.46 E-value=1.3e-05 Score=79.34 Aligned_cols=166 Identities=11% Similarity=0.064 Sum_probs=117.1
Q ss_pred hhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhh-hhcchhHHHHHHHHHHHHHHHHHhcCCc---
Q 013312 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP-ILGEAKLLSLGLFAACINMFICSISWSA--- 336 (445)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 336 (445)
+++++...+..|+.+.+|++...+..++.......-+.. +++++++| ++|+++.+..+.++..++..++.+....
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~p-ilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTP-LIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 456677788888888899999887777766666666655 77789999 4799999999999999988887764311
Q ss_pred -----hhHH-HHHHHHhhhhhhhhhHHHHHhcccCCc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCccc
Q 013312 337 -----WVPY-ATTAFSVLVVFATPSFRSIVSKQVGPN---EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNF 407 (445)
Q Consensus 337 -----~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~ 407 (445)
...+ ...+..+|.+..-|...+...|.++++ .+-+.+.++....++|+.+++.+.+++-+..+....- ..
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~-~~ 159 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQ-DC 159 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC-cc
Confidence 1122 235567888888999999999888754 3677888888899999999999998887553211100 01
Q ss_pred chhHHHHHHHHHHHHHHHHHh
Q 013312 408 PGFSIMCIGLASMVAFIQSLM 428 (445)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~ 428 (445)
....|.+.+++.+++++....
T Consensus 160 ~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 160 YPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 222455566666665555443
No 255
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.45 E-value=5.8e-06 Score=75.57 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=92.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC---Cc----hhHHHH-HHHHhhhh
Q 013312 279 FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW---SA----WVPYAT-TAFSVLVV 350 (445)
Q Consensus 279 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~-~~~g~~~~ 350 (445)
+++...+.+.....++.++++ +..|++.||+|||++....++++.++.+..+... ++ +.+.+. .++|+|.|
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQ-l~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQ-LFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG 159 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHH-HHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence 556667888899999999999 7779999999999999999998888887655532 11 122222 77899999
Q ss_pred hhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 351 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
.-+|...++.+|....+.||.-.+.+..++..|...|..+.-.+..
T Consensus 160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~ 205 (538)
T KOG0252|consen 160 GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSA 205 (538)
T ss_pred CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHH
Confidence 9999999999999999999999998888887777666655544443
No 256
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.44 E-value=1.2e-05 Score=73.05 Aligned_cols=168 Identities=18% Similarity=0.177 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcccccc-ccCchhHhHHHHHH
Q 013312 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-QYGRKAMLTLPLTL 90 (445)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-r~Grr~~l~~~~~~ 90 (445)
..+...++..++.++..+++.+|- .+-++.+..+..-+.+....+..++-...|++.. |.++|+.-.+++..
T Consensus 212 ~f~~fl~l~t~a~~~QD~iLEPyg-------g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~ 284 (403)
T PF03209_consen 212 RFFVFLFLGTLAFFMQDVILEPYG-------GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLL 284 (403)
T ss_pred HHHHHHHHHHHHHHhhHHHcCCch-------hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 344455566666676666666663 4667888888999999999999999999998888 67888888888888
Q ss_pred HHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh---
Q 013312 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--- 167 (445)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~--- 167 (445)
.+++..+..++...++.+.+...-++.|+ +.|.+.....+...|..++++.|..+|.+...+.++..+|..+++..
T Consensus 285 ~~~~f~lii~a~~~~~~~~~~~~~~l~G~-g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 285 GALAFALIILAGPLGSPWLFRPGVFLLGL-GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHH-hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776665554332227899999999999 99999999999999999999999999999999988887777777652
Q ss_pred -----------chhhHHHHHHHHHHHHHHHH
Q 013312 168 -----------STTSAFQAATIVSMLAAAYM 187 (445)
Q Consensus 168 -----------~w~~~f~~~~~~~~i~~~~~ 187 (445)
++...|.+.+++.+++..+.
T Consensus 364 ~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 364 VRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 35566777776655544433
No 257
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.43 E-value=1.2e-06 Score=60.78 Aligned_cols=76 Identities=20% Similarity=0.252 Sum_probs=69.3
Q ss_pred HHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHH
Q 013312 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA 99 (445)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~ 99 (445)
..++.+.+.|.+|.+++| .++|..+.|++.+.+.+|+.++++...++.++..+++.+..+.+...+..+.++
T Consensus 4 mGigRFayTplLP~M~~~--------~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQAD--------GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA 75 (85)
T ss_pred hhhHHHHHHhHhHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 356788899999999864 367778999999999999999999999999998899999999999999999999
Q ss_pred hhcC
Q 013312 100 YRRS 103 (445)
Q Consensus 100 ~~~~ 103 (445)
+.++
T Consensus 76 ~~~~ 79 (85)
T PF06779_consen 76 LTHS 79 (85)
T ss_pred HHhc
Confidence 9998
No 258
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.38 E-value=1.7e-05 Score=74.41 Aligned_cols=183 Identities=16% Similarity=0.156 Sum_probs=121.3
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHh-hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc-hhHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKA-QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAA 323 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~ 323 (445)
|.++...+..++.......+..-.-.|+++ ..+.+.+..|+..+...++..+.+ +..++...|.+. |+.++.+.++.
T Consensus 34 rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~-liF~~Ws~k~~~~k~Pli~s~ii~ 112 (488)
T KOG2325|consen 34 RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFS-LIFGIWSNKTGSVKKPLIVSFLIA 112 (488)
T ss_pred HhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcc-hhhcccccccCCcccCHHHHHHHH
Confidence 345566666676666665554444455544 346777788999999999999999 777888888775 77788899999
Q ss_pred HHHHHHHH-hc--CC--chhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013312 324 CINMFICS-IS--WS--AWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 324 ~~~~~~~~-~~--~~--~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 397 (445)
.++.+++. .. ++ .+.+.++ ++.|+|.+. .....+++++..-.++|.++++..+....+|..+||.+...+...
T Consensus 113 ~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L 191 (488)
T KOG2325|consen 113 IIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL 191 (488)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh
Confidence 98888773 32 22 2333334 555555443 566788888877789999999999988888999988766554432
Q ss_pred hhcCC------CCcccchhHHHHHHHHHHHHHHHHHhccC
Q 013312 398 FLSKG------APFNFPGFSIMCIGLASMVAFIQSLMMSH 431 (445)
Q Consensus 398 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (445)
+.+. ..+.....+-++.+++.++.+++....-+
T Consensus 192 -g~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~ 230 (488)
T KOG2325|consen 192 -GEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFK 230 (488)
T ss_pred -cCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhee
Confidence 1221 11222333445555666666555554433
No 259
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.34 E-value=9.4e-09 Score=99.01 Aligned_cols=112 Identities=13% Similarity=0.051 Sum_probs=98.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC---CchhHHHH-HHHHhhhhhhhhhHH
Q 013312 282 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW---SAWVPYAT-TAFSVLVVFATPSFR 357 (445)
Q Consensus 282 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~g~~~~~~~~~~~ 357 (445)
.+.++..+...++..+++ ++.|+++||+|||+.+..+..+..++.++..+++ +.+.+... ++.|++.+...+...
T Consensus 46 ~~~~~~~~~~~~g~~~G~-~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGA-LIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHHHhhhcccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 346788889999999998 8889999999999999999999999999999988 77777666 888999999999999
Q ss_pred HHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 358 SIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 358 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 394 (445)
.++.|..|++.||...++.+....+|..++..+.-.+
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~ 161 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV 161 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999888888877654333
No 260
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.32 E-value=1.3e-05 Score=63.71 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=84.8
Q ss_pred HHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCC
Q 013312 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (445)
Q Consensus 58 s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~ 137 (445)
++......+.+++.+.+.+++|.|+.++++.+.+.+-.... +-++ .+.++.+-.+.|+ +.+..+++.-.++.+..
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~---~~~l~~~s~l~G~-~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPN---SYTLYPASALLGF-GAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhhh---HHHHHHHHHHHhh-hhHHhhHhhhHHHHHcC
Confidence 44455556666777788999999999999999988655443 4566 7889999999999 99999999999999999
Q ss_pred CccchhhHHHHHHHHHhhhhhhhhhhh
Q 013312 138 SERQRASAFGILLGVLSASFVCGTLAA 164 (445)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (445)
++++|++..++.-.....+.++|.++.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998888888888876654
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.31 E-value=2.2e-06 Score=59.10 Aligned_cols=70 Identities=21% Similarity=0.242 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHH
Q 013312 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (445)
Q Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 90 (445)
+-...++...+.+...|.+|.+.+ +.+++..++|.+.++..+...++.|++|.++||++|++..+.....
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~--------~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLK--------QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhh--------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 445566777788888999999975 3488889999999999999999999999999999998887765544
No 262
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.19 E-value=6.1e-05 Score=71.45 Aligned_cols=131 Identities=15% Similarity=0.158 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHhhhhhhhhhHHHHHhcccCCccchh
Q 013312 292 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGK 371 (445)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 371 (445)
++...+.+ ...|.++||+|||..+........+......+.. .|.+. ..-...+.........++++|....++|..
T Consensus 72 ~~~~~i~s-~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 72 GLLTLISS-PLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred HHHHHHHH-hhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh-hcccccchhhhhhhhhhheeeccchhHHHH
Confidence 66777777 6668999999999998888887777766666554 22222 211234456677888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCC
Q 013312 372 AQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 433 (445)
Q Consensus 372 ~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (445)
..|+.+.....+..++|.+.+.+.+.. .....+.+..+..++.........|++
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~--------~~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFL--------GIALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhc--------CchHHHHHHHHHHHHHHHHHhhccccc
Confidence 999999999999999999999998874 333356777777777777777666554
No 263
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.19 E-value=2.4e-05 Score=53.91 Aligned_cols=70 Identities=21% Similarity=0.251 Sum_probs=59.5
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 013312 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (445)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (445)
+-...++...+.+....++|.|+++ .|+|+.++|.+.++..+...++. .+.|+++||.++++........
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~-pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAP-PLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCccHHHHHHHHH
Confidence 3445667777888889999999998 79999999999999999999998 7789999999998877655543
No 264
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.16 E-value=8.3e-05 Score=68.16 Aligned_cols=128 Identities=14% Similarity=-0.009 Sum_probs=90.2
Q ss_pred HHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCc---hhHH--HH-
Q 013312 269 FLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA---WVPY--AT- 342 (445)
Q Consensus 269 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~- 342 (445)
...|.++.|| +...+-+...++.+..+... +.+-|+.||+|-|....++.....++..+=..+..+ ..+. +.
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~g-f~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~ 144 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFG-FAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTH 144 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHh-hHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhH
Confidence 4446667677 66666788888888888887 777899999999999999999999987775554322 1111 11
Q ss_pred ---HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 343 ---TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 343 ---~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.+.+...........-+..--+|+++|+.+..+..+.+.+|.+++..+...+..+.
T Consensus 145 ~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 145 TGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 22222222222222233455689999999999999999999999988888777653
No 265
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.12 E-value=0.00017 Score=64.42 Aligned_cols=135 Identities=14% Similarity=-0.007 Sum_probs=106.1
Q ss_pred hhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHH
Q 013312 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPY 340 (445)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (445)
........+..-+.+..|.+..+..++......+..+++ ...+.++|++|||+..........+.-.+-...++...+.
T Consensus 92 m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga-~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~ 170 (528)
T KOG0253|consen 92 MEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGA-MVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLC 170 (528)
T ss_pred HHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhh-hhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhh
Confidence 333445555566677778888888888888888999988 6668999999999998888888777777777777766655
Q ss_pred HH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 341 AT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 341 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.. .+.++|.+. .|...++-.|..|..+|+.-+-.. ....+|.+....+.-....++
T Consensus 171 ~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 171 VFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 54 777888777 899999999999999998877766 778888888887766666655
No 266
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.10 E-value=0.009 Score=55.87 Aligned_cols=257 Identities=12% Similarity=0.082 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHH-HHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhc---------C-----------c-c--h
Q 013312 51 YLSGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR---------S-----------I-S--F 106 (445)
Q Consensus 51 ~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~---------~-----------~-~--~ 106 (445)
..+.++-+..-+ +..+..++.+.++++..|.+++-.-...+....+++++.- + . + +
T Consensus 61 e~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~ 140 (509)
T COG3202 61 ESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKW 140 (509)
T ss_pred hhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcccee
Confidence 345666666666 6678888999999999999999888777777777776531 1 0 0 0
Q ss_pred ------hHHHHHHHHHhhhccchhHH-HHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhhc-h---------
Q 013312 107 ------FYAYYALRTLTAMVCEGSIN-CLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS-T--------- 169 (445)
Q Consensus 107 ------~~~l~~~r~l~G~~~~g~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~-w--------- 169 (445)
.|..-+.....-+ -+.... -.-.....|.++.+|-.|.++.++...+++..++..+...++ +
T Consensus 141 ~ili~~~Ws~s~~Yi~aEL-WgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~ 219 (509)
T COG3202 141 FILIVGEWSYSLFYIMAEL-WGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFK 219 (509)
T ss_pred eeEeecchHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHH
Confidence 1333333333333 222222 256678899999999999999999999999988877766642 2
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcc
Q 013312 170 ----TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (445)
Q Consensus 170 ----~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (445)
+..+.+.+..+.++.... .++...-.+.+.-. .....+++.++.+....+.++.+.++
T Consensus 220 ~~~~~~~~~vi~~~~~i~~~l~-~~~~r~il~~~~f~-----------------~~~~~kk~~~k~k~~~~~s~k~i~~S 281 (509)
T COG3202 220 DLLLQILFIVIVILGIIAILLY-RYINRNVLTDPLFY-----------------LRAKKKKKKKKLKLGLIESFKMILRS 281 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhhcccCcchh-----------------HHHhcccccccccCcHHHHHHHHHhh
Confidence 223333333333333222 22222111111000 00000112223334667778888899
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhh---HHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ---FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (445)
|.++.+.+...+++.+...+....-.-.++.+..+.+. .|.+....++...+.....++.+.+|.|-.....+.-++
T Consensus 282 kyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv 361 (509)
T COG3202 282 KYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLV 361 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHH
Confidence 98888888888887777766655544444433322222 244455666665566667788888988876655444443
Q ss_pred HHHH
Q 013312 323 ACIN 326 (445)
Q Consensus 323 ~~~~ 326 (445)
..++
T Consensus 362 ~lit 365 (509)
T COG3202 362 MLIT 365 (509)
T ss_pred HHHH
Confidence 3333
No 267
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=98.08 E-value=1.4e-05 Score=68.98 Aligned_cols=319 Identities=15% Similarity=0.061 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHH
Q 013312 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (445)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~ 132 (445)
.|.+.-+..+...+..+......||+---.=..+..++.+.+..+.+++.+ .++-+.+-.+..+ ++|.--....++
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s---~~~sL~GV~~aSi-ssGlGEiTFL~l 139 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNS---VPMSLLGVVFASI-SSGLGEITFLAL 139 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccc---hhHHHhhhhhhhh-cCCcceeehhhh
Confidence 466666677788888888888999875433345567788889999999999 7877777777777 656554333333
Q ss_pred HhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh------hchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCC-cCCcc
Q 013312 133 VADNISERQRASAFGILLGVLSASFVCGTLAARF------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD-DDLTR 205 (445)
Q Consensus 133 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~------~~w~~~f~~~~~~~~i~~~~~~~~~~e~~~~~~~-~~~~~ 205 (445)
+..+++. ..+.++.+.+.+.++|..--.. ++-|...++...+-++.....++.+++++..... .++..
T Consensus 140 -ss~Y~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~ 214 (409)
T KOG3880|consen 140 -SSRYPSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPST 214 (409)
T ss_pred -hccCCCc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccc
Confidence 3333322 2333333333333444321111 2446666666655555555555666654433211 11111
Q ss_pred ccchhhhcccccCCCCCCcccccccccchhHHHHHHhhcchhhHHHHHHHHHHHhhhhhhHH-HHHHHHHh-hcCCch--
Q 013312 206 PIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQA-SFLYFLKA-QFHFNK-- 281 (445)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~g~~~-- 281 (445)
+..++.... .+..+ .+...+.....++.++.+ +.+....+-.+...+..+.++. ..+...-+ ..|++.
T Consensus 215 ~~~~~~~~~---~~a~e--~~sv~s~~~~~~e~~~~i---~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~ 286 (409)
T KOG3880|consen 215 EIIPSQYLP---FEAAE--EKSVPSRRLGLKETLKRI---KPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSK 286 (409)
T ss_pred eeccCCCCc---ccccc--cccCchhhhcHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccch
Confidence 111111000 00000 000111111223322222 1111122222222233333322 12221110 123322
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH------HHHHHHhcCCchhHHHHHHH-Hhhhhhhh
Q 013312 282 -NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI------NMFICSISWSAWVPYATTAF-SVLVVFAT 353 (445)
Q Consensus 282 -~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-g~~~~~~~ 353 (445)
.+.-++...+.++..+.+ =+-|+=+-+.+..-.++..+ .-..+.+.++.|.+.+.+++ |+..|..+
T Consensus 287 ~sqYRwyqvlYQlGVFiSR------SS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasY 360 (409)
T KOG3880|consen 287 DSQYRWYQVLYQLGVFISR------SSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASY 360 (409)
T ss_pred hhcchhhheeeeeeEEEEe------ccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHH
Confidence 234455555554443322 11122122222222222222 22334456677766665554 77777778
Q ss_pred hhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 354 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 394 (445)
....--+.+..++++|--+++.......+|-.++..+.=.+
T Consensus 361 VNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 361 VNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 77777788888889999999988888888777776655333
No 268
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.01 E-value=0.0039 Score=61.00 Aligned_cols=136 Identities=18% Similarity=0.157 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccccccc-CchhHhHHHHHHHHHHHHHHHhhcCc----------------------chh
Q 013312 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPLTLSIIPLAILAYRRSI----------------------SFF 107 (445)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~----------------------~~~ 107 (445)
..+.-..+.+.-......+..+.++|-| ||-+++.++.++..++..+..+.... ...
T Consensus 73 ~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~ 152 (571)
T KOG1237|consen 73 GGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQL 152 (571)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHH
Confidence 3344455666666777778899999965 89999999998888886555432110 013
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHhcCCC---ccc---hhhHHHHHHHHHhhhhhhhhhhhhh----hchhhHHHHHH
Q 013312 108 YAYYALRTLTAMVCEGSINCLALAYVADNIS---ERQ---RASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAAT 177 (445)
Q Consensus 108 ~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~---~~~---r~~~~~~~~~~~~~g~~~g~~l~~~----~~w~~~f~~~~ 177 (445)
..++.+.-+..+ |.|..-|...++-+|-++ +++ +...+.++....+.|..++-.+-.+ .+|.+.|.+..
T Consensus 153 ~~~~~~l~lia~-G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~ 231 (571)
T KOG1237|consen 153 AVLYGALYLIAL-GAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPT 231 (571)
T ss_pred HHHHHHHHHhee-ccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHH
Confidence 467777777777 778888999999999998 322 2356788888888888777554433 58999998888
Q ss_pred HHHHHHHHHH
Q 013312 178 IVSMLAAAYM 187 (445)
Q Consensus 178 ~~~~i~~~~~ 187 (445)
+...++.++.
T Consensus 232 ~~~~lai~iF 241 (571)
T KOG1237|consen 232 VLNALAILIF 241 (571)
T ss_pred HHHHHHHHHH
Confidence 7766655444
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.97 E-value=0.006 Score=57.93 Aligned_cols=52 Identities=12% Similarity=0.071 Sum_probs=41.0
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHH
Q 013312 339 PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 390 (445)
Q Consensus 339 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 390 (445)
.+...++|+..|-.......+..+.+++++|-.+-.+....-.+|-.+|..+
T Consensus 376 ~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 376 IILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345788999999999999999999998888777777777777777777654
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.96 E-value=0.00075 Score=53.67 Aligned_cols=106 Identities=16% Similarity=0.126 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHHhcccCCc
Q 013312 289 LIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIVSKQVGPN 367 (445)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~ 367 (445)
++......+.. ++.|.+.+++|.|+.+.++.+...+-....... +.+.++. ..+.|++.+..+...-.++.+...++
T Consensus 44 ai~Y~~~~~s~-l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~-~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 44 AILYGSFAISC-LFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP-NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHH-HhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 34444445555 667899999999999999999888766554433 4444444 58889999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 368 EQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 368 ~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
.+++..|+.-.+...+..+|..+.-.+..
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999888888866555443
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.93 E-value=0.0004 Score=66.12 Aligned_cols=131 Identities=20% Similarity=0.292 Sum_probs=94.6
Q ss_pred HHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-----cchhHHHHHHHHHHHHHHHHHhcCC----c
Q 013312 266 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAKLLSLGLFAACINMFICSISWS----A 336 (445)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~----~ 336 (445)
..-...|+++.+|.++.+...+.....+...+ . ++.|.++|-+ +||+.+.++.++..++.+.++..+. .
T Consensus 9 ~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 9 RLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-K-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-h-hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 34455677888999999999888888887766 4 5558999975 3555667777777665555555432 2
Q ss_pred hhHH-HHHHHHhhhhhhhhhHHHHHhcccC--CccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 337 WVPY-ATTAFSVLVVFATPSFRSIVSKQVG--PNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 337 ~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
.... ..++..++.........+...|... ++.+|..++.......+|+.++..+.|.+.+..
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~ 151 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF 151 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC
Confidence 2222 2355567777777777777776652 233889999999999999999999999998875
No 272
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.83 E-value=0.00026 Score=66.22 Aligned_cols=105 Identities=16% Similarity=0.136 Sum_probs=80.6
Q ss_pred hHhHHHHHHHHHHHHHHHhhcCcch------hHHHHHHHHHhhhccchhHHHHHHHHHhcCCCcc---chhhHHHHHHHH
Q 013312 82 AMLTLPLTLSIIPLAILAYRRSISF------FYAYYALRTLTAMVCEGSINCLALAYVADNISER---QRASAFGILLGV 152 (445)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~ 152 (445)
|.+.++.+++.+|.++..++..... .+.++++-.+.++ |.|..-|...++.+|.++++ +|.+.+.++..+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~-G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAV-GTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHH-HHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHh-ccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 5678888999999888554432111 3678889999999 88999999999999999875 467788889999
Q ss_pred Hhhhhhhhhhhhhh----hchhhHHHHHHHHHHHHHHHH
Q 013312 153 LSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYM 187 (445)
Q Consensus 153 ~~~g~~~g~~l~~~----~~w~~~f~~~~~~~~i~~~~~ 187 (445)
.++|..+++.+..+ .+|.+.|.+.++..++..+..
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 99999998776665 489999999887766655443
No 273
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.71 E-value=6.6e-06 Score=79.90 Aligned_cols=172 Identities=10% Similarity=0.098 Sum_probs=2.6
Q ss_pred hhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcC-----
Q 013312 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW----- 334 (445)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 334 (445)
....++....-.-++++++++..+.|++.+.+-++..+.. +...+..+|..|.+.+-.|.++++++.+++++.+
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~-~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVV-LFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 3444444444456677899999999999999999999988 5556888888888888899999999988876511
Q ss_pred ------C---------------------------------------chhHHHH-HHHHhhhhhhhhhHHHHHhcccCCcc
Q 013312 335 ------S---------------------------------------AWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNE 368 (445)
Q Consensus 335 ------~---------------------------------------~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~ 368 (445)
+ .+.+++. ++.|+|....++...+|+-|.+++++
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~ 174 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKN 174 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccccc
Confidence 0 0112222 66788888899999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC------------CCc--ccchhHHHHHHHHHHHHHHHHHhccCC
Q 013312 369 QGKAQGCISGISSFANIVSPLIFSPLTALFLSKG------------APF--NFPGFSIMCIGLASMVAFIQSLMMSHT 432 (445)
Q Consensus 369 ~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (445)
.+...|+...+..+|-++|-.+++...+.+.+.. .|- |..++-|++.+.+.++..+....++|+
T Consensus 175 splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 175 SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999888888775432211 111 122233556666666655555555543
No 274
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.63 E-value=0.018 Score=52.98 Aligned_cols=113 Identities=10% Similarity=0.000 Sum_probs=60.9
Q ss_pred HHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHh
Q 013312 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY 100 (445)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~ 100 (445)
...+++....-+.+.++.-.. +. +.......+....+...+....--.+.-|. |+++.........+....+.+
T Consensus 31 LlpWN~fiTa~~y~~~~~~~~--~~---~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~il~i~~l~~ 104 (406)
T KOG1479|consen 31 LLPWNMFITASDYYYYRFPGY--HN---SKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAILFIVTLDL 104 (406)
T ss_pred ccchHhhhccHHHHHhhcCCC--ch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 345677777777777664211 11 445555666666777777777777777772 222222222222222222222
Q ss_pred hc--Cc----chhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccc
Q 013312 101 RR--SI----SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ 141 (445)
Q Consensus 101 ~~--~~----~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~ 141 (445)
+. +. ..+...++.-.+.+. +.+..........++. |++.
T Consensus 105 ~~v~~~~~~~~ff~vt~~~vv~~~~-a~a~~qgs~~G~a~~~-P~~y 149 (406)
T KOG1479|consen 105 ALVKTDTWTNGFFLVTLIIVVLLNL-ANAVVQGSLYGLAGLF-PSEY 149 (406)
T ss_pred HhhccCCccchhHHHHHHHHHHHhh-hhhhhccchhhhhhcC-CHHH
Confidence 21 11 116666777777887 7777776666655554 5443
No 275
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.58 E-value=0.0045 Score=55.80 Aligned_cols=136 Identities=16% Similarity=0.153 Sum_probs=98.3
Q ss_pred hhhhhhHHHHHHHHHhhcCCch--hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCC--
Q 013312 260 LSEGGMQASFLYFLKAQFHFNK--NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS-- 335 (445)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~--~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 335 (445)
..........+.+..+ .+.+. ...++......+...++. +..|++.||.|||+.+..+......+.+...+..+
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGS-LLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVG 93 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHh-hhhhhccccccchHHHHHHHHHHHHHHHHHHhCccch
Confidence 3444445566666666 44444 467888888888888887 78899999999998777777654444445555544
Q ss_pred chhHHHH-HHHHhhhhhhhhhHHHHHhcccCC-ccchhHHHHHHH-HHHHHHHHHHHHHHHHHHh
Q 013312 336 AWVPYAT-TAFSVLVVFATPSFRSIVSKQVGP-NEQGKAQGCISG-ISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 336 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~ 397 (445)
.+..... ...+++.+...+...++..+..|+ ++|+...+.... ...++..++|.+.+.+.+.
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333 446778888889999999999987 678999998888 5788888888777777765
No 276
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.56 E-value=0.00037 Score=68.58 Aligned_cols=188 Identities=9% Similarity=0.075 Sum_probs=136.1
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHH
Q 013312 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (445)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (445)
+.+..++....+......++....-..++++++++..+.|++...+-++..+.. ....+...|..|.+.+-.|.+++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i-~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLI-IFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhh-HhHHHhccccCccceeeechhHHHH
Confidence 333333333333333333555555566788899999999999999999988877 5556888888888888899999999
Q ss_pred HHHHHHhcC-------------------C--------------------------------chhHHH-H-HHHHhhhhhh
Q 013312 326 NMFICSISW-------------------S--------------------------------AWVPYA-T-TAFSVLVVFA 352 (445)
Q Consensus 326 ~~~~~~~~~-------------------~--------------------------------~~~~~~-~-~~~g~~~~~~ 352 (445)
+.++.++.+ + +|.+++ . ++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 888876520 0 122222 2 6678999999
Q ss_pred hhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CC--------Cc--ccchhHHHHHHHHHHH
Q 013312 353 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK-GA--------PF--NFPGFSIMCIGLASMV 421 (445)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~-~~--------~~--~~~~~~~~~~~~~~~~ 421 (445)
++...+|+-|.+.+++.....|+...+..+|-++|-.+++.+...+.+. .. |- |..+.-|++++.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888765444 11 11 2223346777888888
Q ss_pred HHHHHHhccCCCC
Q 013312 422 AFIQSLMMSHTPA 434 (445)
Q Consensus 422 ~~~~~~~~~~~~~ 434 (445)
+.+..++++++.+
T Consensus 335 ~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 335 SAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHhCcccCc
Confidence 7777777776544
No 277
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.54 E-value=0.0013 Score=45.74 Aligned_cols=77 Identities=14% Similarity=0.118 Sum_probs=65.8
Q ss_pred hhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchh
Q 013312 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV 338 (445)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (445)
++-+.+...+|...+| .++|..+.|++-+.+.++..++. +...++.++.++++.+..+.+...+..+.+++.++.+.
T Consensus 6 igRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GA-l~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGA-LLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred hHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 4445667788888877 79999999999999999999999 77788888888889999999999999999988877654
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.41 E-value=0.024 Score=52.58 Aligned_cols=134 Identities=13% Similarity=0.076 Sum_probs=99.8
Q ss_pred hhhhHHHHHHHHHhh-cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHH
Q 013312 262 EGGMQASFLYFLKAQ-FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPY 340 (445)
Q Consensus 262 ~~~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (445)
+-....++..|+.+. .|++..+..--......=+-+...+....+.|.++.|++++.+.+...+...++.+.++.+.+-
T Consensus 19 frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq 98 (412)
T PF01770_consen 19 FRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQ 98 (412)
T ss_pred cCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHH
Confidence 445678888899886 7999888654333322222233335557889999999999999999888888888888877666
Q ss_pred HH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 341 AT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 341 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
+. +.+|..... ....++++-..+|+++--++.+......-+|..++..++=.+..
T Consensus 99 ~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 99 LMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 556655544 67777888888899998999999999988888888866655554
No 279
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.20 E-value=0.058 Score=51.57 Aligned_cols=126 Identities=11% Similarity=-0.010 Sum_probs=85.5
Q ss_pred HHHhhcCC-----chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc----CC-------
Q 013312 272 FLKAQFHF-----NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS----WS------- 335 (445)
Q Consensus 272 ~~~~~~g~-----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~------- 335 (445)
-++|.... +.+...++.+..-+...+....+.+++++|++|+++...........++++++. .+
T Consensus 28 ~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~ 107 (472)
T TIGR00769 28 DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTAL 107 (472)
T ss_pred hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHH
Confidence 34565544 345677777766666666633667899999999998776666555555554432 00
Q ss_pred --------------------chhHHHH-HHHHhhhhhhhh-hHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 013312 336 --------------------AWVPYAT-TAFSVLVVFATP-SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (445)
Q Consensus 336 --------------------~~~~~~~-~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 393 (445)
.|..... ....+......+ ..+++.+|....++..+-.++.....++|..+++.+..+
T Consensus 108 ~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~ 187 (472)
T TIGR00769 108 ADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKY 187 (472)
T ss_pred HHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 112233333444 778899999999999999999999999999999998888
Q ss_pred HHHh
Q 013312 394 LTAL 397 (445)
Q Consensus 394 l~~~ 397 (445)
+.+.
T Consensus 188 ~~~~ 191 (472)
T TIGR00769 188 FSKL 191 (472)
T ss_pred HHHh
Confidence 7753
No 280
>PRK03612 spermidine synthase; Provisional
Probab=97.00 E-value=0.083 Score=51.57 Aligned_cols=143 Identities=11% Similarity=0.083 Sum_probs=84.4
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHH---HHHHHHHHHHH
Q 013312 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS---LGLFAACINMF 328 (445)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~ 328 (445)
.+..++.+++...+.....-.+...+|-+....+.+.+.+..+..+|+ .+++++.++..++.... ++.+......+
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs-~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~l 98 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGA-LLSKYLLRDAAAGFVAVELLLALLGGLSALI 98 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555666666666666777788888888888888888888887 56566653322222111 11111111111
Q ss_pred HH---HhcCCchh--HHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 329 IC---SISWSAWV--PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 329 ~~---~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
+. .+...... ....++.++..|+..|....+..+.. .++.|+..|-......+|+.+|+.+.+.+.-
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 99 LYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 11 11101111 11124456777777777777665432 2345778888899999999999999998765
No 281
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.94 E-value=0.029 Score=52.04 Aligned_cols=110 Identities=12% Similarity=0.159 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHH--HHHHH---HHHHHhhcCcchhHHHHHHHHHhhhccchh
Q 013312 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT--LSIIP---LAILAYRRSISFFYAYYALRTLTAMVCEGS 124 (445)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~--~~~~~---~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~ 124 (445)
..+..+.+.+|.+|-.++.--...+ |+ |+..+.+.+ +..+. ....-+.++ .|.+++.-+..|+ .+|.
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fips---i~ivf~lif~eGL-lGGa 351 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPS---IWIVFVLIFYEGL-LGGA 351 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHH-hhhH
Confidence 3566777888888877775543322 34 444443332 22222 223334567 8888899999999 7788
Q ss_pred HHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh
Q 013312 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (445)
Q Consensus 125 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (445)
.+......+.|-.|+++|..++|..+.+-+.|..++..++-.+
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 8888899999999999999999999999999999988877543
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.84 E-value=0.045 Score=51.76 Aligned_cols=111 Identities=17% Similarity=0.212 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHhhhhccccc---cccCchhHhHHHHHHHHHHHHHHHhhcCcc---------------hhHHHHHHHH
Q 013312 54 GFQQAIIGLGTLVMMPVIGNLS---DQYGRKAMLTLPLTLSIIPLAILAYRRSIS---------------FFYAYYALRT 115 (445)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~---Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~r~ 115 (445)
++-.-...++..+++.+.+.++ +|+||++.+.++..+..++.++.-...... .+...++.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 3333334455555556566665 467999999999988888877766532110 1567788889
Q ss_pred HhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 116 LTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 116 l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
+.|+ +.+......+.++.+.. +++|..+.++...-..++..++-.....
T Consensus 362 l~G~-~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 362 LLGF-GDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHhh-HHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999 99999999999999999 5888899999988888887776555444
No 283
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.78 E-value=0.002 Score=59.46 Aligned_cols=144 Identities=12% Similarity=0.079 Sum_probs=106.3
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh----hcchh-HHHHHHH
Q 013312 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAK-LLSLGLF 321 (445)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~-~~~~~~~ 321 (445)
.+.....+.+...+++..-.++.|+|+++ .|.+....+......-+.+.+.+ .+.|..+|| +|||| .+..+..
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQ-P~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQ-PLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceec-ccccccccccccccccccchHHHhhH
Confidence 34445556666677777778899999988 79999999998888888888988 677899995 66665 5566667
Q ss_pred HHHHHHHHHHhcCC----------c----hhHHH----HHHHHhhhhhhhhhHHHHHhcccCCccchh-HHHHHHHHHHH
Q 013312 322 AACINMFICSISWS----------A----WVPYA----TTAFSVLVVFATPSFRSIVSKQVGPNEQGK-AQGCISGISSF 382 (445)
Q Consensus 322 ~~~~~~~~~~~~~~----------~----~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~~ 382 (445)
...+++.++.++.+ . +.+.. .-++-+..........++..|...++++-+ +++.+..+..+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 77777777766432 1 11111 123345566677888999999988777777 99999999999
Q ss_pred HHHHHHHHHH
Q 013312 383 ANIVSPLIFS 392 (445)
Q Consensus 383 g~~i~~~~~g 392 (445)
|+.+|-.+.+
T Consensus 191 GnvLGY~~g~ 200 (498)
T KOG0637|consen 191 GNVLGYALGS 200 (498)
T ss_pred cceeeeeccc
Confidence 9998876665
No 284
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.62 E-value=0.048 Score=49.20 Aligned_cols=76 Identities=18% Similarity=0.231 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~ 88 (445)
....+..+.++...+.-+-.-....++.+.. +-|......-...-....++..++.|.+.|+..|+|++...+
T Consensus 28 ~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~-------gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L 100 (503)
T KOG2601|consen 28 TVIFLYLGYFLTTWGDRMWEFSVSLFMILLG-------GNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL 100 (503)
T ss_pred eeehhhHHHHHhHhhHhHHHHHHHHHHHHHc-------CceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH
Confidence 3445666777777666555555566655431 111223333344445667788889999999999999988766
Q ss_pred HHH
Q 013312 89 TLS 91 (445)
Q Consensus 89 ~~~ 91 (445)
.+.
T Consensus 101 ~lq 103 (503)
T KOG2601|consen 101 LLQ 103 (503)
T ss_pred hhc
Confidence 543
No 285
>PRK03612 spermidine synthase; Provisional
Probab=96.50 E-value=0.19 Score=49.14 Aligned_cols=117 Identities=14% Similarity=0.010 Sum_probs=66.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHH---HHHHHHHHHhhcCc--chhHHHHHHHHHhhhcc
Q 013312 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL---SIIPLAILAYRRSI--SFFYAYYALRTLTAMVC 121 (445)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~---~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~ 121 (445)
+.+....+.+.+++..+..+|+.+.|++.++--|+.. ..-..+ ..++..+....... .....++..-++.++ .
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-l 123 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL-L 123 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 5555677999999999999999998887643322222 111111 11111111111110 001222334455666 6
Q ss_pred chhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 122 EGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 122 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
.|...|....+..+... ++-++..|.......+|.++|+++.++
T Consensus 124 ~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 124 IGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 67777877776655432 234566788888888888888877765
No 286
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.31 E-value=0.19 Score=43.31 Aligned_cols=50 Identities=0% Similarity=-0.124 Sum_probs=31.8
Q ss_pred cchhhHHHHHHHHHhhhhhhh--hhhhh-----h--hchhhHHHHHHHHHHHHHHHHHH
Q 013312 140 RQRASAFGILLGVLSASFVCG--TLAAR-----F--LSTTSAFQAATIVSMLAAAYMRV 189 (445)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~~g--~~l~~-----~--~~w~~~f~~~~~~~~i~~~~~~~ 189 (445)
++|+........++++|.++. |.+-. . -+|++.+.+.+++.++-+++...
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~i 60 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYII 60 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666667777777654 43332 1 27999998888887665554433
No 287
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.22 E-value=0.072 Score=49.86 Aligned_cols=111 Identities=13% Similarity=0.061 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHHHHHHHhc--C-Cc------hhHHH-HHHHHhhhhhhhhhHHHHHhcccCCc---cchhHHHHHHHHH
Q 013312 314 KLLSLGLFAACINMFICSIS--W-SA------WVPYA-TTAFSVLVVFATPSFRSIVSKQVGPN---EQGKAQGCISGIS 380 (445)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~--~-~~------~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~ 380 (445)
+.+..+.++..++.+++..+ + .. +.++. ..+.++|.|..-|...++..|.++++ +|.+.+..+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 45677888888887774442 2 11 33444 46779999999999999999999866 3567778888999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCC
Q 013312 381 SFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 432 (445)
Q Consensus 381 ~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (445)
++|..+++...+++-++. + ....|.+.++..+++.+..+.-++.
T Consensus 82 n~G~~~~~~~~~~i~~~~-------~-~~~~f~i~~~~~~~~~~~f~~~~~~ 125 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY-------G-WFLGFGIPAIGMLLALIVFLSGRKR 125 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS---------HHHHHHHHHHHHHHHHHHHHCCCCT
T ss_pred hhhhHhhcccchhhcccc-------c-hhhhhhHHHHHHHHHHHHHHhCCcC
Confidence 999999999999998764 2 3334677777777776666554443
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.67 E-value=0.0035 Score=56.82 Aligned_cols=52 Identities=17% Similarity=0.163 Sum_probs=3.7
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHH
Q 013312 339 PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 390 (445)
Q Consensus 339 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 390 (445)
.+...++++..|-.......+..+.+++++|..+-.+....-..|-.+|..+
T Consensus 252 ~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 252 IILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ---------------HHHH---------------------------------
T ss_pred HHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345778899999999999999999998888777776666666666666544
No 289
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.46 E-value=0.46 Score=44.96 Aligned_cols=132 Identities=14% Similarity=0.063 Sum_probs=92.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHH---hhcCcc----hhHHHHHHHHHhhh
Q 013312 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA---YRRSIS----FFYAYYALRTLTAM 119 (445)
Q Consensus 47 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~----~~~~l~~~r~l~G~ 119 (445)
+.+...+|..-+...+....+.....++.+|+|..|.=+++.........++. +.+..+ ....++.+-.+.=+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 77778999999999999999999999999999998888877765544433332 222211 12333333333333
Q ss_pred ccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhhchhhHHHHHHHH
Q 013312 120 VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQAATIV 179 (445)
Q Consensus 120 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~w~~~f~~~~~~ 179 (445)
|-=.+.-+..-++.|..|+++|+...|.-....++-.++-..++-.+....-|.....+
T Consensus 369 -GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~lv~i 427 (432)
T PF06963_consen 369 -GLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFGWLVLI 427 (432)
T ss_pred -HHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcChHHHh
Confidence 22244567888899999999999999999998888887777666665555445444433
No 290
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.99 E-value=0.8 Score=41.90 Aligned_cols=142 Identities=12% Similarity=0.075 Sum_probs=76.9
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhh-----hhcchhHH-HH
Q 013312 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP-----ILGEAKLL-SL 318 (445)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~-~~ 318 (445)
++.+..+...+.+.+...+... .+|..++. -|.|-++.+.......=-. + - ++...+.| |+||||.- .-
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~s-L-K-llWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPFS-L-K-LLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHHH-H-H-HHHHhhhHHHHHHhhccccceeee
Confidence 3456666666666665555444 88888885 3666666554333221111 1 1 22334555 99998743 33
Q ss_pred HHHHHHHHHHHHHhcCC---------chhHHH---HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHH
Q 013312 319 GLFAACINMFICSISWS---------AWVPYA---TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 386 (445)
Q Consensus 319 ~~~~~~~~~~~~~~~~~---------~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 386 (445)
+..+....+..+....+ +..... .+++-+....--.....+......+|+.|-+..........|.++
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL 184 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL 184 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh
Confidence 44444444444444222 111222 133344444445566667777778888887776666666666666
Q ss_pred HHHHH
Q 013312 387 SPLIF 391 (445)
Q Consensus 387 ~~~~~ 391 (445)
+..++
T Consensus 185 ~~~if 189 (510)
T KOG3574|consen 185 GNVVF 189 (510)
T ss_pred hccee
Confidence 55443
No 291
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.84 E-value=0.012 Score=50.06 Aligned_cols=146 Identities=13% Similarity=0.011 Sum_probs=80.2
Q ss_pred cchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 013312 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (445)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (445)
++-.+....+...+.-...+....++|.|..+...++....+++-.+..+.+...+.+..-.--++...|.....|.++-
T Consensus 199 ~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiw 278 (412)
T KOG4830|consen 199 GHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIW 278 (412)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHH
Confidence 33445555666666666667778888998888788877777776666666655554221111111112222333344444
Q ss_pred HHHHHHHHhcCCchh---HHHHHHHHhhhhhhhhhHHHHHhcccCC--ccchhHHHHHHHHHHHHHHHHHH
Q 013312 324 CINMFICSISWSAWV---PYATTAFSVLVVFATPSFRSIVSKQVGP--NEQGKAQGCISGISSFANIVSPL 389 (445)
Q Consensus 324 ~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~i~~~ 389 (445)
..+...+.+.+..|- ..+..+.|+..........++.++.... +..+...|..+....+...++-.
T Consensus 279 ifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~GiA~~ 349 (412)
T KOG4830|consen 279 IFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNGIAYQ 349 (412)
T ss_pred HHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcccHHHH
Confidence 334333333333332 2223556777766665555555555443 44566677777777776666543
No 292
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.76 E-value=0.75 Score=39.90 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccCch--hHhHHHHHHHHHHHHHHH----hhcCcchhHHHHHHHHHhhhccchhHH
Q 013312 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRK--AMLTLPLTLSIIPLAILA----YRRSISFFYAYYALRTLTAMVCEGSIN 126 (445)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr--~~l~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~r~l~G~~~~g~~~ 126 (445)
-|.+.+.+++..++++-+..++..|-..| +.+.+..+.......+.. .+|+.+....-+++..+.-. +.|.++
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~-cvGlfw 362 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEA-CVGLFW 362 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHH-HHhhcc
Confidence 38889999999999999998888876554 344444444443333322 23332223333555566666 778899
Q ss_pred HHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhh----hhhhchhhHHHHHHHHHHHHHHHH
Q 013312 127 CLALAYVADNISERQRASAFGILLGVLSASFVCGTLA----ARFLSTTSAFQAATIVSMLAAAYM 187 (445)
Q Consensus 127 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l----~~~~~w~~~f~~~~~~~~i~~~~~ 187 (445)
|..+-+-+++.|+++|...+.++..-.++=.-++-.. +--.+-|..|-++.+...+..+..
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHH
Confidence 9999999999999999998888765544332222111 111355788888877765554443
No 293
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=93.61 E-value=5.3 Score=35.98 Aligned_cols=69 Identities=13% Similarity=0.044 Sum_probs=49.6
Q ss_pred HHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCC
Q 013312 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS 138 (445)
Q Consensus 65 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~ 138 (445)
...+.+.+.+..++|-|+.+.++...+......- +-+. +..++.+-...|+ +.+..+..--+|+++...
T Consensus 72 ~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~pr---~~tlVPa~~~~G~-aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 72 IDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEPR---YETLVPAGLVLGM-AAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cchh---HHhhccHHHhhcc-ccccccccCcceecHHHH
Confidence 4444455578899999999999888876643322 2233 7888999999999 888887766666666554
No 294
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.43 E-value=1.7 Score=41.51 Aligned_cols=148 Identities=15% Similarity=0.120 Sum_probs=88.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHH-HHHHHHHHHHHHHHHHhhhhccccccccCch-hHhHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAI-YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK-AMLTL 86 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr-~~l~~ 86 (445)
..+...+..++.++-.-.+.|.+....+. ++.+.+. +..-....++.++-.+|..+..+. ..-++| +.+.+
T Consensus 270 ki~~~~~~vf~~F~vTL~vFPgv~~~i~~------~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~-~~p~~~~~~l~i 342 (437)
T TIGR00939 270 KVWLLAFSVVFVFTVTLSVFPAITTAVTS------SGLGLSNWFYPIICFLLFNLFDWLGRSLTSKF-MWPDEDSRWLPI 342 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceEEEeec------cCCCCCccHHHHHHHHHHHHHHHHHhhhhhee-EeeCCCccchHH
Confidence 44555555555554444444443222211 1111111 355677888888888888855432 112222 12223
Q ss_pred HHHH---HHHHHHHHHhhc------CcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhh
Q 013312 87 PLTL---SIIPLAILAYRR------SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF 157 (445)
Q Consensus 87 ~~~~---~~~~~~~~~~~~------~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 157 (445)
..+. +.-..++|..-+ -..+-+..++.-++.|+ ..|......+.+..+..+++||..+-.+...+..+|.
T Consensus 343 ~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gl-tnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl 421 (437)
T TIGR00939 343 LSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGF-SNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGL 421 (437)
T ss_pred HHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHH-hhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2322 222233333221 00115667778999999 8898888999999999999999999888888888888
Q ss_pred hhhhhhh
Q 013312 158 VCGTLAA 164 (445)
Q Consensus 158 ~~g~~l~ 164 (445)
.+|..++
T Consensus 422 ~~Gs~l~ 428 (437)
T TIGR00939 422 ALGAVLS 428 (437)
T ss_pred HHHHHHH
Confidence 8887654
No 295
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.14 E-value=8.9 Score=37.23 Aligned_cols=117 Identities=12% Similarity=0.012 Sum_probs=72.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc---------CCc--------------
Q 013312 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---------WSA-------------- 336 (445)
Q Consensus 280 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-------------- 336 (445)
+++.+.++-...-+...+....+..++++++++.++...........+.++++. ++.
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 555555554433343333333556799999999987765555554444444331 110
Q ss_pred --------hhHHHHHHH-Hhhhhhhh-hhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 337 --------WVPYATTAF-SVLVVFAT-PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 396 (445)
Q Consensus 337 --------~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 396 (445)
|...+..+. -+...... -..+.+.+|..+.++..+..++.....++|..+++.+..++.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 11122222 3568889999999999999999999999999999888888777
No 296
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=91.63 E-value=7.8 Score=38.46 Aligned_cols=146 Identities=13% Similarity=0.090 Sum_probs=94.0
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchhHHHHHHHHHHHHHHH
Q 013312 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFAACINMFI 329 (445)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 329 (445)
.+....+-..+..+....+-.|+.+.++.+...+.-............. +.+++++|- .||-+.+.++.++..++..+
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~-l~g~~laD~f~gry~tI~~~s~i~~~G~~~ 120 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLP-LLGAFLADSFLGRYFTINIGSLISLLGLFG 120 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 3444445555666666777888888888888666655555555555544 777899995 57888888888877777555
Q ss_pred HHhcC----------------------Cch---hHHH-HHHHHhhhhhhhhhHHHHHhcccCC----ccc--hhHHHHHH
Q 013312 330 CSISW----------------------SAW---VPYA-TTAFSVLVVFATPSFRSIVSKQVGP----NEQ--GKAQGCIS 377 (445)
Q Consensus 330 ~~~~~----------------------~~~---~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~----~~~--g~~~g~~~ 377 (445)
+.... +.. .++. ..+..+|.+..-|...++-.|-+++ +.+ ..-+....
T Consensus 121 lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~y 200 (571)
T KOG1237|consen 121 LTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFY 200 (571)
T ss_pred HHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHH
Confidence 44311 000 1111 1344568888889999999888872 222 35666777
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 013312 378 GISSFANIVSPLIFSPLTAL 397 (445)
Q Consensus 378 ~~~~~g~~i~~~~~g~l~~~ 397 (445)
...+.|..++..+.-++-++
T Consensus 201 f~~~~g~l~a~t~~vyiq~~ 220 (571)
T KOG1237|consen 201 FSQNGGALLAQTVLVYIQDN 220 (571)
T ss_pred HHHHHHHHHHHHHHHhhhhc
Confidence 77777777777666555443
No 297
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=91.38 E-value=9.1 Score=33.31 Aligned_cols=29 Identities=7% Similarity=0.006 Sum_probs=13.0
Q ss_pred hhhhhHHHHHHHHHhhc----CCchhhHHHHHH
Q 013312 261 SEGGMQASFLYFLKAQF----HFNKNQFADLML 289 (445)
Q Consensus 261 ~~~~~~~~~~~~~~~~~----g~~~~~~g~~~~ 289 (445)
..++.+..=..|.+++- +.|.....+.++
T Consensus 193 vlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs 225 (254)
T PF07857_consen 193 VLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFS 225 (254)
T ss_pred HHHhcccchHHHHHhCccccCCCCCcchheeHH
Confidence 34444333345666643 334444444443
No 298
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=90.74 E-value=5.4 Score=34.20 Aligned_cols=77 Identities=12% Similarity=0.082 Sum_probs=36.1
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHHHHh-hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 013312 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKA-QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (445)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (445)
.|.++..+...|+.-++.-.....+..-..+ .+|.- .|- ...-.++..++- +.+..++.|+..|.+.+.+.++.
T Consensus 206 spifikaFsltF~aEwGDRSQlaTI~laA~en~~gV~---~G~-~iGH~lCT~lAV-igGk~lAskIS~rtVt~~ggi~F 280 (294)
T KOG2881|consen 206 SPIFIKAFSLTFLAEWGDRSQLATIALAADENPLGVA---IGA-IIGHALCTGLAV-IGGKYLASKISVRTVTLIGGILF 280 (294)
T ss_pred cHHHHHHHHHHHHHHhccHHHHHHHHHhcccCcceee---ecc-HHHHHHHHHHHH-hhhHHHhhhheeEEEEEecchhH
Confidence 4556666666666665555443333222222 11111 011 111222222322 33356788998888766665554
Q ss_pred HHH
Q 013312 324 CIN 326 (445)
Q Consensus 324 ~~~ 326 (445)
.+.
T Consensus 281 i~F 283 (294)
T KOG2881|consen 281 IIF 283 (294)
T ss_pred HHH
Confidence 443
No 299
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=85.64 E-value=3.5 Score=36.76 Aligned_cols=106 Identities=14% Similarity=0.075 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHhhhhccccccccCchh-Hh-----HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhH
Q 013312 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA-ML-----TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSI 125 (445)
Q Consensus 52 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~-~l-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~ 125 (445)
|.-|.+..|.+|-.+ .+=+-|+=|-+ .. ..-..++.+.-....+.++ +|..++.-+.-|+ -+|..
T Consensus 289 qYRwyqvlYQlGVFi-----SRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftps---i~ivf~lI~~EGL-lGGas 359 (409)
T KOG3880|consen 289 QYRWYQVLYQLGVFI-----SRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPS---IWIVFALILFEGL-LGGAS 359 (409)
T ss_pred cchhhheeeeeeEEE-----EeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHhh-cCchH
Confidence 456777777765433 22222322222 11 1223445555666677888 8888999999999 44555
Q ss_pred HHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhh
Q 013312 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (445)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 166 (445)
+....--+.+-.++++|..+++....+-+.|..++..++-.
T Consensus 360 YVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 360 YVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 55566666676778999999999999999988887766543
No 300
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=84.79 E-value=7.6 Score=36.24 Aligned_cols=129 Identities=11% Similarity=0.127 Sum_probs=83.9
Q ss_pred hhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHH-HHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHH-----
Q 013312 26 MVVPAITDVTMMALCPGLDECSLAIYLSGFQQAI-IGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA----- 99 (445)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~-~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~----- 99 (445)
....+.|-+..+. .++...+.+..-.+... +.+.-.+|.+...++-++= ||...+. .++..+..-++.
T Consensus 261 VTLsiFPg~~~~~----~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~-v~lR~lfiPlF~~cn~~ 334 (406)
T KOG1479|consen 261 VTLSIFPGFCSEV----KSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIP-VLLRLLFIPLFLLCNYP 334 (406)
T ss_pred eeeEecchhhccc----ccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHH-HHHHHHHHHHHHHhccC
Confidence 3344667666553 12222244566666777 8899999987777766654 3333332 222222222222
Q ss_pred ----hhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhh
Q 013312 100 ----YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (445)
Q Consensus 100 ----~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 164 (445)
+-++ -++.+..-.+.|+ ..|-.....+.+..+..|++++..+-.+.......|...|..++
T Consensus 335 ~~~v~~~~---~~~~~~l~~~lgl-snGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 335 PLPVVFES---DGWFIFLMSLLGL-SNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CCCceecC---chHHHHHHHHHHh-ccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 2333 5778889999999 88988889999999999999988777777777777777776554
No 301
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=83.13 E-value=9.4 Score=36.67 Aligned_cols=142 Identities=13% Similarity=0.059 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHh-hcCCchhhHHHHH--HHHHHHHHHHHHHHHHHhhhhhcchhHH-HHHHHHHHH
Q 013312 250 QAAVVAFFSGLSEGGMQASFLYFLKA-QFHFNKNQFADLM--LIAGLAGTISQLLFMPLLAPILGEAKLL-SLGLFAACI 325 (445)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~g~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~ 325 (445)
.+++.+++.+...+....-.|..+++ ..+.|-.+.|.+. +...-.-++-+.++=....+|+||||.- +-...+.++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~ 83 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGI 83 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHH
Confidence 34556666666665555678888877 1144444444322 1122222233323333445689998743 334444444
Q ss_pred HHHHHHhcC-------------------CchhH-----HHHH-HHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHH
Q 013312 326 NMFICSISW-------------------SAWVP-----YATT-AFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS 380 (445)
Q Consensus 326 ~~~~~~~~~-------------------~~~~~-----~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 380 (445)
.++.++... ....+ ...+ ++-+...---.....+.-....+++++-+.......+
T Consensus 84 ~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~ 163 (544)
T PF13000_consen 84 LMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQ 163 (544)
T ss_pred HHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHh
Confidence 444443221 01111 1111 1111222222334445555667788777766655555
Q ss_pred HHHHHHHHHHH
Q 013312 381 SFANIVSPLIF 391 (445)
Q Consensus 381 ~~g~~i~~~~~ 391 (445)
++|.+++-.++
T Consensus 164 ~~Gyfls~tvF 174 (544)
T PF13000_consen 164 TAGYFLSFTVF 174 (544)
T ss_pred hhhHHHHHHHH
Confidence 66666655444
No 302
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=82.99 E-value=46 Score=32.07 Aligned_cols=125 Identities=13% Similarity=0.002 Sum_probs=77.6
Q ss_pred HHHhhcC---CchhhHHHHHHHHHH-HHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc---------CC---
Q 013312 272 FLKAQFH---FNKNQFADLMLIAGL-AGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS---------WS--- 335 (445)
Q Consensus 272 ~~~~~~g---~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--- 335 (445)
-++|.+. .+++...++-...-+ .+++.. .+..++.+++.+.++..+-.......++++++. ++
T Consensus 48 ~lKDslvv~~~gae~I~FlK~~~vlP~avif~-~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~ 126 (509)
T COG3202 48 SLKDSLVVTRQGAESISFLKTWGVLPSAVIFT-IIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEF 126 (509)
T ss_pred HhhhheEeecCcchhhHHHHHHHhchHHHHHH-HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHH
Confidence 3455443 345566666555555 333333 666789999999888766666555555555431 11
Q ss_pred --------c------------hhHHHHHHHH-hhhhh-hhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 013312 336 --------A------------WVPYATTAFS-VLVVF-ATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 393 (445)
Q Consensus 336 --------~------------~~~~~~~~~g-~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 393 (445)
+ |......+.. +-... ..-..+...+|....++..+-.++.+...+++..++..+..+
T Consensus 127 ~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 127 SRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred HHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2111221111 11222 223566778999999999999999999999998888888887
Q ss_pred HHHh
Q 013312 394 LTAL 397 (445)
Q Consensus 394 l~~~ 397 (445)
+..+
T Consensus 207 ~~k~ 210 (509)
T COG3202 207 LSKH 210 (509)
T ss_pred Hhhc
Confidence 7663
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.89 E-value=17 Score=26.47 Aligned_cols=33 Identities=18% Similarity=0.043 Sum_probs=28.3
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013312 366 PNEQGKAQGCISGISSFANIVSPLIFSPLTALF 398 (445)
Q Consensus 366 ~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 398 (445)
++.++.+.++-.....+++.+.....||+.|++
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456788888888888999999999999999998
No 304
>PRK15015 carbon starvation protein A; Provisional
Probab=77.03 E-value=85 Score=31.51 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=53.2
Q ss_pred HHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHH-hcCCCc
Q 013312 61 GLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYV-ADNISE 139 (445)
Q Consensus 61 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i-~~~~~~ 139 (445)
.....++..-+|.++-+-|..---+ .+..++...+..+.. ++.-++.+=+.+. -..-..|+..-.= .|+.|.
T Consensus 11 ~~~a~~ga~~~~~~al~rge~mnal---~lv~aa~~~y~iaYr---fYgr~ia~kv~~l-D~~r~TPA~~~~DG~DYvPt 83 (701)
T PRK15015 11 TVLSVMGAFALGYIALNRGEQINAL---WIVVASVCIYLIAYR---FYGLYIAKNVLAV-DPTRMTPAVRHNDGLDYVPT 83 (701)
T ss_pred HHHHHHHHHHheeeeecCCCchhHH---HHHHHHHHHHHHHHH---HHHHHHHHHhccC-CCCCCCCceECCCCCCcCcC
Confidence 3444566666777777666652211 111112222222222 3333444445555 3333323221111 244453
Q ss_pred cchhhHHHHHHHH-HhhhhhhhhhhhhhhchhhH
Q 013312 140 RQRASAFGILLGV-LSASFVCGTLAARFLSTTSA 172 (445)
Q Consensus 140 ~~r~~~~~~~~~~-~~~g~~~g~~l~~~~~w~~~ 172 (445)
+|-..+|-+-.+ .+.|.++||.++..+||--.
T Consensus 84 -~k~VLfGHHFasIAGAGPivGPvlAa~~GwlP~ 116 (701)
T PRK15015 84 -DKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPG 116 (701)
T ss_pred -CccchhHHHHHHHhccCccHHHHHHHHHcchHH
Confidence 444667766544 57789999999999999643
No 305
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=76.11 E-value=58 Score=29.73 Aligned_cols=93 Identities=18% Similarity=0.122 Sum_probs=47.3
Q ss_pred HHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHhhhhhhhhhHHHHH--------hcc---cCCcc
Q 013312 301 LFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVPYA-TTAFSVLVVFATPSFRSIV--------SKQ---VGPNE 368 (445)
Q Consensus 301 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~--------~~~---~~~~~ 368 (445)
...+.+.+++|-|+.+.++..........=. -+.....+. ....|++.+..+..--+++ .+. ..+..
T Consensus 76 m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl-~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~ 154 (390)
T KOG3097|consen 76 MFMPLLIRFLGTKWTMVLAVFPYALYIAANL-EPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGM 154 (390)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc-chhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCce
Confidence 4445888999999998877666544322111 111112222 3556666665554333333 222 11122
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 369 QGKAQGCISGISSFANIVSPLIFSPL 394 (445)
Q Consensus 369 ~g~~~g~~~~~~~~g~~i~~~~~g~l 394 (445)
..+-.|.+..+...+..+|..+...+
T Consensus 155 ~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 155 KVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred eeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 24556666666665555555444444
No 306
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=75.83 E-value=1.1 Score=40.73 Aligned_cols=150 Identities=18% Similarity=0.188 Sum_probs=3.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHH-HHHHHHHHHHHHhhhhccccccc-cCchhHhHH
Q 013312 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSG-FQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTL 86 (445)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~ 86 (445)
..+...+..++..+......|.+..-.+.. ... ..+.+..- .+...+.++-.+|....++.-=+ ..+|+....
T Consensus 144 ~i~~~~~~i~~~f~vTl~~FP~it~~v~s~----~~~-~~~~~f~pv~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~ 218 (309)
T PF01733_consen 144 KIWPYALSIFLVFFVTLSVFPGITSAVQSS----NNP-DWSSYFVPVVLFLLFNLGDFIGRFLASWPRWPGPSPRWLWIL 218 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhheeeeccceeeeeecc----ccC-CCccHHHHHHHHHHHHHHHHhcchhcceeEecccccccHHHH
Confidence 344455555555555444555553322211 011 11112221 35667888888888876653211 034444433
Q ss_pred HH--HHHHHHHHHHHhhcC-------cchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhh
Q 013312 87 PL--TLSIIPLAILAYRRS-------ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF 157 (445)
Q Consensus 87 ~~--~~~~~~~~~~~~~~~-------~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 157 (445)
+. +++.-..++|-.-++ ..+-+..++.-++.|+ ..|......+.+..+..++++|..+-.+.......|.
T Consensus 219 s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~-TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl 297 (309)
T PF01733_consen 219 SLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGF-TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGL 297 (309)
T ss_dssp -------------------------------------------------HHHH---------------------------
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHH-ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 22 222222223312111 0114666778889999 8888888999999999999999888888888888888
Q ss_pred hhhhhhh
Q 013312 158 VCGTLAA 164 (445)
Q Consensus 158 ~~g~~l~ 164 (445)
.+|..++
T Consensus 298 ~~Gs~ls 304 (309)
T PF01733_consen 298 FIGSVLS 304 (309)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 8877654
No 307
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=75.03 E-value=20 Score=32.80 Aligned_cols=100 Identities=22% Similarity=0.130 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccccCchhHhHH--HHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHH
Q 013312 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL--PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (445)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~ 128 (445)
..-|..-++..+..+++.+..|.+--++.|..-+++ +....+...++++.+.+ +|..+++..+... .-....+.
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~---Iw~~Ya~yvlfr~-~y~l~iti 346 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQH---IWVCYAGYVLFRV-IYQLTITI 346 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccc---eehhhhhHHHHHh-hHhhhhhH
Confidence 456888888899999999999999988888654444 44444555556666677 7877777777766 55566677
Q ss_pred HHHHHhcCCCccchhhHHHHHHHHHh
Q 013312 129 ALAYVADNISERQRASAFGILLGVLS 154 (445)
Q Consensus 129 ~~~~i~~~~~~~~r~~~~~~~~~~~~ 154 (445)
+..-+++..+++.-|..+|+.....-
T Consensus 347 A~~~iA~nL~~e~~gLvFGiNTFvAl 372 (433)
T KOG3810|consen 347 ATFQIARNLSSELFGLVFGINTFVAL 372 (433)
T ss_pred HHHHHHHhhhhhhheeeeehHHHHHH
Confidence 77888888888888888888776543
No 308
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.45 E-value=13 Score=27.12 Aligned_cols=39 Identities=18% Similarity=0.226 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccccccc-CchhHhHHHH
Q 013312 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPL 88 (445)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~ 88 (445)
....++-.+.-+++..+.....|++.||| |-+|..++..
T Consensus 41 ~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 41 GYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 34445556666777777788889999987 4455444433
No 309
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=66.48 E-value=79 Score=26.66 Aligned_cols=49 Identities=10% Similarity=0.113 Sum_probs=25.0
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh--hcchhHHHHHHHHHHHH
Q 013312 277 FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI--LGEAKLLSLGLFAACIN 326 (445)
Q Consensus 277 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 326 (445)
.|.+..................+..++.++.++ .+++. +.-|.++..++
T Consensus 152 ~g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG 202 (206)
T TIGR02840 152 LGLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLG 202 (206)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHH
Confidence 355555555555555555444443454445554 35554 56666655554
No 310
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=63.99 E-value=53 Score=28.77 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhhhhccccccc-cCchhHhH----HHHHHHHHHHHHH-HhhcCcc-hhHHHHHHHHHhhhcc
Q 013312 53 SGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLT----LPLTLSIIPLAIL-AYRRSIS-FFYAYYALRTLTAMVC 121 (445)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~----~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~r~l~G~~~ 121 (445)
.....-++..+..++....|.+... +.||+.+. .+.+...+..+.. ...++.. .+..+++.-++.|++.
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 3455566677777888888888774 45555443 2234444443332 1222211 1566777788888733
No 311
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=60.65 E-value=1.8e+02 Score=28.78 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcc
Q 013312 288 MLIAGLAGTISQLLFMPLLAPILGE 312 (445)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (445)
.....+.+.+++ ..++++-+.++.
T Consensus 303 i~~y~~~~~iaG-y~S~~~yk~~~g 326 (521)
T PF02990_consen 303 IILYALTSFIAG-YVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHhhHHH-HHHHHHHHHcCC
Confidence 344445555554 555666665554
No 312
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=54.37 E-value=1.8e+02 Score=26.92 Aligned_cols=84 Identities=12% Similarity=0.016 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccccCchhHhH----HHHHHHHHHHHHH-HhhcCcc-hhHHHHHHHHHhhhccchh
Q 013312 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT----LPLTLSIIPLAIL-AYRRSIS-FFYAYYALRTLTAMVCEGS 124 (445)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~----~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~r~l~G~~~~g~ 124 (445)
.+.+.+.+.|.....+++...-++.|.--.-+... .+++.-.-...+. .|+.+.. .-+.+++.-++.|. -.|.
T Consensus 43 lq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~-LVG~ 121 (508)
T COG4262 43 LQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV-LVGA 121 (508)
T ss_pred eehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH-HHhc
Confidence 44566777778888888888877777543332222 2222211111222 3333321 26788888999998 7899
Q ss_pred HHHHHHHHHhc
Q 013312 125 INCLALAYVAD 135 (445)
Q Consensus 125 ~~~~~~~~i~~ 135 (445)
..|..+.++..
T Consensus 122 EiPL~mrml~~ 132 (508)
T COG4262 122 EIPLLMRMLQR 132 (508)
T ss_pred chHHHHHHHHH
Confidence 99999988876
No 313
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=53.05 E-value=1.9e+02 Score=26.79 Aligned_cols=116 Identities=16% Similarity=0.126 Sum_probs=56.4
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc-hhH---HHHHHH---HHHHHHHHHHhcC--CchhHHH-HHHHH
Q 013312 277 FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKL---LSLGLF---AACINMFICSISW--SAWVPYA-TTAFS 346 (445)
Q Consensus 277 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~---~~~~~~---~~~~~~~~~~~~~--~~~~~~~-~~~~g 346 (445)
.|-+..+.+.+.+.+-...-+++ ....++.|.--. |.+ +..|.+ ...+..+.++.-. +.+.++. ..++|
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs-~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG 116 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGS-LLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIG 116 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhh-hhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 45555666666666555555555 333343332111 111 112222 1222222222222 2334444 36678
Q ss_pred hhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013312 347 VLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 395 (445)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 395 (445)
.-.|.-.|....+.++.. ++.....+.....-++|...+..+..++.
T Consensus 117 ~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 117 VLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHH
Confidence 778888888888887622 22222333334446777776666666554
No 314
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=51.71 E-value=85 Score=24.91 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=26.1
Q ss_pred hhhHHHHHhcccCCccchhHHHHHHHHHHHHHHH
Q 013312 353 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 386 (445)
Q Consensus 353 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 386 (445)
..+.|.+++..-++++.|+..|+-..-.+++...
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4455666777788888999999988888876544
No 315
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=50.50 E-value=1.3e+02 Score=25.79 Aligned_cols=14 Identities=21% Similarity=0.280 Sum_probs=7.9
Q ss_pred hhhhhhHHHHHHHH
Q 013312 260 LSEGGMQASFLYFL 273 (445)
Q Consensus 260 ~~~~~~~~~~~~~~ 273 (445)
+..++....+|.++
T Consensus 145 f~~ggliPLlp~~~ 158 (225)
T cd02434 145 FLVFGIIPLLPYLL 158 (225)
T ss_pred HHHHHHHHHHHHHH
Confidence 34445566666654
No 316
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=50.12 E-value=2.3e+02 Score=26.88 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=19.6
Q ss_pred chhHHHHHHHHHhcCCCccc--hhhHHHHHHHHH
Q 013312 122 EGSINCLALAYVADNISERQ--RASAFGILLGVL 153 (445)
Q Consensus 122 ~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~ 153 (445)
.+..+.+..++..+.+++.+ |+..++.....+
T Consensus 175 tg~~~~avaalf~qL~~~a~~t~g~~f~llG~af 208 (536)
T COG3559 175 TGMVFTAVAALFAQLSPSARFTRGVAFALLGTAF 208 (536)
T ss_pred HHHHHHHHHHHHHHhCccccccchhHHHHHHHHH
Confidence 35566677778888888654 444555544444
No 317
>PRK11469 hypothetical protein; Provisional
Probab=48.97 E-value=1.5e+02 Score=24.51 Aligned_cols=53 Identities=19% Similarity=0.113 Sum_probs=31.5
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHH
Q 013312 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (445)
Q Consensus 278 g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (445)
|.+..................+..++.++.+++++|.-+.-|.++..++.-.+
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444445555555453555566677787777777777777776543
No 318
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=48.35 E-value=1.7e+02 Score=24.67 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=15.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhchhhHH
Q 013312 145 AFGILLGVLSASFVCGTLAARFLSTTSAF 173 (445)
Q Consensus 145 ~~~~~~~~~~~g~~~g~~l~~~~~w~~~f 173 (445)
.....-.+..+|.++|..+...++.+...
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~~al~ 195 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGFWALL 195 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 34444455556666666666666654333
No 319
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=48.34 E-value=48 Score=24.27 Aligned_cols=51 Identities=12% Similarity=0.075 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc
Q 013312 282 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (445)
Q Consensus 282 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (445)
...|-.+..++-..++.+ +..++..|+..+.+.=.+|..++.++..++.+.
T Consensus 54 ~~fGRvYAAYGGvfI~~S-l~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVAS-LLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHH-HHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 445777888888888888 777899999988877777777777776655443
No 320
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=47.02 E-value=1.8e+02 Score=24.78 Aligned_cols=71 Identities=24% Similarity=0.144 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc---chhHHHHHHH
Q 013312 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG---EAKLLSLGLF 321 (445)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~ 321 (445)
.+......+...+.--+..+....|.. ..-|+.+-+..+..+++++...- +..|..++++. ||+....+..
T Consensus 132 ~~~~~~lG~~wG~lPCGlVYs~l~~A~--~tgS~~~Gal~mlaFGlGTlP~l-l~~G~~s~~~s~~~r~~~~rl~~g 205 (232)
T COG2836 132 LPGALFLGMLWGLLPCGLVYSALAYAL--STGSAFEGALVMLAFGLGTLPNL-LAMGIFSSKLSKSSRKRLNRLSGG 205 (232)
T ss_pred chHHHHHHHHhcccchHHHHHHHHHHH--HcCCHHHHHHHHHHHhhcccHHH-HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 444444455444333232222222332 24577777788888888887765 66677777653 4444444333
No 321
>PRK02237 hypothetical protein; Provisional
Probab=44.72 E-value=81 Score=23.20 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhc
Q 013312 283 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (445)
Q Consensus 283 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (445)
..|-.+..++-..++.+ +..++..|+..+.+.=.+|..+..++..++.+.
T Consensus 57 ~~GRvYAAYGGvyI~~S-l~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGS-LLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhHHHHhhhHHHHHH-HHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 46778888888888888 777899999888777777777777776555443
No 322
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=41.00 E-value=32 Score=25.14 Aligned_cols=51 Identities=18% Similarity=0.100 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhc
Q 013312 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (445)
Q Consensus 52 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~ 102 (445)
..|-..++|.-.+.+.++.+++..|+.-+.+-=.++..+..++..+..+.|
T Consensus 55 ~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 55 AFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred cchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 357788888999999999999999999887777777777777766655443
No 323
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=38.06 E-value=1.5e+02 Score=21.12 Aligned_cols=50 Identities=2% Similarity=-0.148 Sum_probs=30.6
Q ss_pred chhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHH
Q 013312 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA 294 (445)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~ 294 (445)
++..+.+....+...+++.....+.|..+.....-+....|+......+.
T Consensus 15 ~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~~ 64 (91)
T PF04341_consen 15 RRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQIV 64 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHHH
Confidence 34455566666666677777788888888665442345556655544443
No 324
>PRK09664 tryptophan permease TnaB; Provisional
Probab=37.13 E-value=3.8e+02 Score=25.60 Aligned_cols=20 Identities=15% Similarity=-0.135 Sum_probs=12.3
Q ss_pred HHHHHhhhhhhhhhHHHHHh
Q 013312 342 TTAFSVLVVFATPSFRSIVS 361 (445)
Q Consensus 342 ~~~~g~~~~~~~~~~~~~~~ 361 (445)
+++..++.....|....+..
T Consensus 201 Vl~~SFgfh~iIPsl~~y~~ 220 (415)
T PRK09664 201 VCLASFGFHGNIPSLIICYG 220 (415)
T ss_pred HHHHhhhCCCcchHHHHHhC
Confidence 35556666666677666643
No 325
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=36.60 E-value=85 Score=21.86 Aligned_cols=20 Identities=5% Similarity=0.120 Sum_probs=14.3
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 013312 170 TSAFQAATIVSMLAAAYMRV 189 (445)
Q Consensus 170 ~~~f~~~~~~~~i~~~~~~~ 189 (445)
|+..++.+++-+++++.+.+
T Consensus 23 RYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHheee
Confidence 67777888888777665544
No 326
>PRK02237 hypothetical protein; Provisional
Probab=35.11 E-value=57 Score=23.94 Aligned_cols=50 Identities=12% Similarity=-0.001 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccCchhHhHHHHHHHHHHHHHHHhhc
Q 013312 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (445)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~ 102 (445)
.|-+.++|.-.+.+.++.+++..|+.-.-+-=.++..+..++..+..+.|
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 57888889999999999999999999877666677777777765554443
No 327
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=34.91 E-value=1.9e+02 Score=21.37 Aligned_cols=36 Identities=11% Similarity=0.091 Sum_probs=24.1
Q ss_pred hhcchhhHHHHHHHHHHHhhhhhhHHHHHHHHHhhc
Q 013312 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF 277 (445)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (445)
+.+.+.+.........+.++++....+..+++.+.+
T Consensus 45 l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L 80 (106)
T PF11872_consen 45 LSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQL 80 (106)
T ss_pred hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556666667777788888888877776643
No 328
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=34.31 E-value=3.9e+02 Score=24.94 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=25.2
Q ss_pred cchhhHHHHHHHH-HhhhhhhhhhhhhhhchhhHH
Q 013312 140 RQRASAFGILLGV-LSASFVCGTLAARFLSTTSAF 173 (445)
Q Consensus 140 ~~r~~~~~~~~~~-~~~g~~~g~~l~~~~~w~~~f 173 (445)
.+|-..++..-.. .+.|.++||.++..+||--.+
T Consensus 52 ~~~~vlfghhf~sIAGaGPI~GPi~aa~~GwlPa~ 86 (376)
T PF02554_consen 52 TNKWVLFGHHFASIAGAGPIVGPILAAQFGWLPAL 86 (376)
T ss_pred CchHHhhHHHHHHHhccccchHHHHHHHhcchHHH
Confidence 4455677776544 578899999999999997443
No 329
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=32.43 E-value=3.4e+02 Score=24.28 Aligned_cols=56 Identities=16% Similarity=0.043 Sum_probs=32.5
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhhhhhhhh
Q 013312 110 YYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (445)
Q Consensus 110 l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~ 167 (445)
.-..|.+.|+ ---.+ ...+++++-.+|++++--..--...+.+++.++-|++|-.+
T Consensus 22 ~~~lr~~~g~-~~vlf-~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGF-PFVLF-LPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHH-HHHHH-hccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888888 43333 45888899998865443223223333444445556665543
No 330
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=31.85 E-value=3.4e+02 Score=23.48 Aligned_cols=14 Identities=7% Similarity=0.392 Sum_probs=7.8
Q ss_pred hhhhhhHHHHHHHH
Q 013312 260 LSEGGMQASFLYFL 273 (445)
Q Consensus 260 ~~~~~~~~~~~~~~ 273 (445)
+..++....+|+++
T Consensus 161 F~ig~liPLLPf~~ 174 (234)
T cd02433 161 FALGALIPVLPFLF 174 (234)
T ss_pred HHHHHHHHHHHHHH
Confidence 34445566666654
No 331
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=30.51 E-value=3.1e+02 Score=24.46 Aligned_cols=105 Identities=10% Similarity=0.095 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHH-
Q 013312 315 LLSLGLFAACINMFICSISWSAWVPYAT-TAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS- 392 (445)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g- 392 (445)
++........++++.-...+++|..... .+.+++.++.... ..|+...|+...+..+-...+|.-.+
T Consensus 2 L~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml~~~-----------G~r~~~i~~~~Ll~~v~t~~~~~~~~~ 70 (284)
T PF12805_consen 2 LIATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGMLGVY-----------GPRAATIGFATLLVAVYTMAGPSPGPE 70 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH-----------hhHHHHHHHHHHHHHHHHHhCCCcchH
Q ss_pred HHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHHhccCCCCCCCCcccc
Q 013312 393 PLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPASSKSQNQC 442 (445)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (445)
+..... .+.+.++...+-.+..+.++|.++.++.-.+|
T Consensus 71 ~~~~~~------------l~~~Gglwy~~lsl~~~~l~p~r~~rqaLa~~ 108 (284)
T PF12805_consen 71 ALEHAL------------LFLAGGLWYLLLSLLWWPLRPYRPVRQALAEC 108 (284)
T ss_pred HHHHHH------------HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
No 332
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=30.00 E-value=4.8e+02 Score=24.68 Aligned_cols=147 Identities=13% Similarity=0.071 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH------
Q 013312 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA------ 323 (445)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------ 323 (445)
.+....++...+.-........|+.+..|-+-...+..-.+-+....+.+ .+.|...|+..|+|++.....+.
T Consensus 31 ~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg-~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 31 FLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLG-PIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred hhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhH-HHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 35566666777777777777778877656555555555455555555555 44467778888888665444332
Q ss_pred HHHHHHHHh-cC------CchhHHHHHHHHhhhhhh---hhhHHH------HH---hcccCCccchhHHHHHHHHHHHHH
Q 013312 324 CINMFICSI-SW------SAWVPYATTAFSVLVVFA---TPSFRS------IV---SKQVGPNEQGKAQGCISGISSFAN 384 (445)
Q Consensus 324 ~~~~~~~~~-~~------~~~~~~~~~~~g~~~~~~---~~~~~~------~~---~~~~~~~~~g~~~g~~~~~~~~g~ 384 (445)
+.+.++..+ .+ .++.. .+.+.....+.+ ...... ++ ++--+++......+.....-....
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t-~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFT-VCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHhhheeecchhcccccHHH-HHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 112222222 22 23222 222221111111 111111 11 121222333334466666777888
Q ss_pred HHHHHHHHHHHHhh
Q 013312 385 IVSPLIFSPLTALF 398 (445)
Q Consensus 385 ~i~~~~~g~l~~~~ 398 (445)
.+.|.+.|.+.+..
T Consensus 189 ~Lapv~tg~Iitfv 202 (503)
T KOG2601|consen 189 LLAPVITGLIITFV 202 (503)
T ss_pred chhhhhhcccceee
Confidence 99999999988765
No 333
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=29.17 E-value=3.6e+02 Score=22.98 Aligned_cols=14 Identities=21% Similarity=0.356 Sum_probs=8.1
Q ss_pred hhhhhhHHHHHHHH
Q 013312 260 LSEGGMQASFLYFL 273 (445)
Q Consensus 260 ~~~~~~~~~~~~~~ 273 (445)
+..++....+|+++
T Consensus 147 f~lg~liPllpy~~ 160 (218)
T cd02432 147 FSVGALLPLLAILL 160 (218)
T ss_pred HHHHHHHHHHHHHH
Confidence 34455666677654
No 334
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=28.06 E-value=7e+02 Score=25.90 Aligned_cols=48 Identities=21% Similarity=0.179 Sum_probs=29.0
Q ss_pred hcccccccc----CchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhh
Q 013312 70 VIGNLSDQY----GRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAM 119 (445)
Q Consensus 70 ~~G~l~Dr~----Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 119 (445)
+.+.++|.= ||.+-++++..+++++++...+.... .|.+...-++.++
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~--p~~~~~~l~~~tf 93 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPK--PWLFPFLLTLLTF 93 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHH
Confidence 344566643 55677788888888888777766552 3444444444443
No 335
>PRK11588 hypothetical protein; Provisional
Probab=27.32 E-value=6.1e+02 Score=24.98 Aligned_cols=28 Identities=25% Similarity=0.247 Sum_probs=17.1
Q ss_pred hcccCCccchhHHHHHHHHHHHHHHHHHH
Q 013312 361 SKQVGPNEQGKAQGCISGISSFANIVSPL 389 (445)
Q Consensus 361 ~~~~~~~~~g~~~g~~~~~~~~g~~i~~~ 389 (445)
.|... -.|..+.-.++......+.+.|.
T Consensus 433 ad~lG-isrq~avlAfq~GDg~tNlI~Pt 460 (506)
T PRK11588 433 ADLVG-VNRQVAVLAFQLGDGFTNIIYPT 460 (506)
T ss_pred HHHcC-CCHHHHHHHHHHHhHHHHHhhhh
Confidence 44444 33455666667777777777775
No 336
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=27.29 E-value=5.5e+02 Score=24.44 Aligned_cols=46 Identities=9% Similarity=0.025 Sum_probs=19.7
Q ss_pred HHHHHhhhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHH
Q 013312 342 TTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 388 (445)
Q Consensus 342 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~ 388 (445)
.++.|...+........+. +...-++.-.+..+....+-.|....+
T Consensus 296 A~iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~g 341 (404)
T TIGR03644 296 ATLIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVP 341 (404)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHH
Confidence 3444444444433333333 334444444455544444444444333
No 337
>COG1288 Predicted membrane protein [Function unknown]
Probab=27.27 E-value=5.7e+02 Score=24.58 Aligned_cols=29 Identities=21% Similarity=0.257 Sum_probs=17.4
Q ss_pred HhcccCCccchhHHHHHHHHHHHHHHHHHH
Q 013312 360 VSKQVGPNEQGKAQGCISGISSFANIVSPL 389 (445)
Q Consensus 360 ~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~ 389 (445)
.+|.+. -.|..+.-.++....+.+.+.|.
T Consensus 410 LaD~vg-v~RqvvV~Afq~g~G~~n~I~PT 438 (481)
T COG1288 410 LADLVG-VPRQVVVLAFQLGDGFSNIIAPT 438 (481)
T ss_pred hHHhcC-CCHHHhhhhhhhcchhhheecCc
Confidence 455554 33555555566777777777763
No 338
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=27.07 E-value=6.7e+02 Score=26.05 Aligned_cols=47 Identities=15% Similarity=0.053 Sum_probs=27.9
Q ss_pred ccccccc----cCchhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhh
Q 013312 71 IGNLSDQ----YGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAM 119 (445)
Q Consensus 71 ~G~l~Dr----~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 119 (445)
.+.++|. -||.+-+.++.++++++++...+.... .|.+...-++.++
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~--p~lf~~~l~~~tf 93 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK--PWLFAVGLTVSTF 93 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHH
Confidence 3556664 356666778888888777777665542 3444444444444
No 339
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=26.46 E-value=1.2e+02 Score=25.05 Aligned_cols=21 Identities=19% Similarity=0.358 Sum_probs=14.1
Q ss_pred HHHHHHHhhhhccccccccCc
Q 013312 60 IGLGTLVMMPVIGNLSDQYGR 80 (445)
Q Consensus 60 ~~l~~~~~~~~~G~l~Dr~Gr 80 (445)
|.+++.+.+.+.|++.||..+
T Consensus 91 yL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 355666677777777777664
No 340
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=26.38 E-value=5.6e+02 Score=24.28 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=26.3
Q ss_pred CccchhhHHHHHHHHHhhhhhhhhhhhhhhchhh
Q 013312 138 SERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171 (445)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~w~~ 171 (445)
++++.+..+.+.....+.|...-|..++.-||-.
T Consensus 2 ~~~d~~w~~~l~gt~IGaGiL~LP~~ag~~G~i~ 35 (397)
T TIGR00814 2 TKTDTGWMLGLYGTAIGAGVLFLPIQAGLGGLWV 35 (397)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 4567788888999999999988888876666543
No 341
>COG2095 MarC Multiple antibiotic transporter [Intracellular trafficking and secretion]
Probab=25.78 E-value=4.1e+02 Score=22.42 Aligned_cols=77 Identities=12% Similarity=0.070 Sum_probs=40.7
Q ss_pred hhhhhhhhHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccchhHHHHHHHHHHHHHHHHH
Q 013312 348 LVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 427 (445)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (445)
...........-+.+..++++|-+..=-.+......-.+....+..+.+.+ +..--.+-+.+.+.+.-..+-.
T Consensus 18 ~dP~G~ipvf~slt~~~~~~~r~~v~~ra~i~a~~ill~f~~~G~~il~~f-------gIsi~a~rIAGGilLf~ia~~m 90 (203)
T COG2095 18 IDPIGNLPVFISLTKGLSPEERNRVALRASIIALLILLVFLLLGEGILRFF-------GISIDAFRIAGGILLFLIALRM 90 (203)
T ss_pred hCCCchhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCchhHHHHhhhHHHHHHHHHH
Confidence 333333334444556677788776665555555555555555666667765 3333345566555554444433
Q ss_pred hccC
Q 013312 428 MMSH 431 (445)
Q Consensus 428 ~~~~ 431 (445)
...+
T Consensus 91 l~~~ 94 (203)
T COG2095 91 LFGP 94 (203)
T ss_pred hcCC
Confidence 3333
No 342
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=25.16 E-value=2e+02 Score=18.67 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=14.5
Q ss_pred hhHHHHHHHH---HHHHHHHHHHhccCCC
Q 013312 170 TSAFQAATIV---SMLAAAYMRVFLKDDV 195 (445)
Q Consensus 170 ~~~f~~~~~~---~~i~~~~~~~~~~e~~ 195 (445)
|..|.+...+ .++.-++.++.+|+.+
T Consensus 32 Rl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 32 RLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 6666555543 2334445567788765
No 343
>PF01350 Flavi_NS4A: Flavivirus non-structural protein NS4A; InterPro: IPR000404 Flaviviruses encode a single polyprotein. This is cleaved into three structural and seven non-structural proteins. The NS4A protein is small and poorly conserved among the Flaviviruses. NS4A contains multiple hydrophobic potential membrane spanning regions []. NS4A has only been found in cells infected by Kunjin virus [].; GO: 0016032 viral reproduction, 0016070 RNA metabolic process, 0044423 virion part
Probab=24.78 E-value=1.6e+02 Score=23.07 Aligned_cols=30 Identities=27% Similarity=0.324 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCcccccCC
Q 013312 416 GLASMVAFIQSLMMSHTPASSKSQNQCCLA 445 (445)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (445)
+...++.+++...+.||+.+++..+||++|
T Consensus 102 Ag~~lv~filmvVLiPEpg~QRS~~DN~LA 131 (144)
T PF01350_consen 102 AGVLLVFFILMVVLIPEPGKQRSQQDNQLA 131 (144)
T ss_pred HHHHHHHHHHHHhcccCCCCcCCcccchHH
Confidence 344455555555666676666666676653
No 344
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=23.30 E-value=2.4e+02 Score=18.95 Aligned_cols=33 Identities=12% Similarity=0.238 Sum_probs=17.2
Q ss_pred hhhhch-----hhHHHHHHHHH------HHHHHHHHHhccCCCC
Q 013312 164 ARFLST-----TSAFQAATIVS------MLAAAYMRVFLKDDVP 196 (445)
Q Consensus 164 ~~~~~w-----~~~f~~~~~~~------~i~~~~~~~~~~e~~~ 196 (445)
+.+++| |..|.+..... ++.-++.++.+|+.+.
T Consensus 22 a~yf~id~tlVRll~vl~~~~~~~~~~~ii~Yiia~~imP~~~~ 65 (70)
T COG1983 22 AEYFGIDPTLVRLLFVLLTLFGGLTGFGIIAYIIAALIMPSEED 65 (70)
T ss_pred HHHhCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHCCCCcc
Confidence 445665 44454444443 3444555677776544
No 345
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=23.28 E-value=4.6e+02 Score=22.17 Aligned_cols=15 Identities=27% Similarity=0.498 Sum_probs=8.3
Q ss_pred hhhhhHHHHHHHHHh
Q 013312 261 SEGGMQASFLYFLKA 275 (445)
Q Consensus 261 ~~~~~~~~~~~~~~~ 275 (445)
..++....+|.++..
T Consensus 143 ~lg~liPllp~~~~~ 157 (213)
T PF01988_consen 143 ILGGLIPLLPYFFLP 157 (213)
T ss_pred HHHHHHHHHHHHHhh
Confidence 344455666666644
No 346
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=23.27 E-value=6.3e+02 Score=24.43 Aligned_cols=128 Identities=11% Similarity=-0.085 Sum_probs=0.0
Q ss_pred CcchhhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCc
Q 013312 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (445)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 80 (445)
++.+...+....+-+-.++..++..+..|.+ -..+.+++..+..++.+...+...++.++--....++|-
T Consensus 9 ~~~~~~~~~~~~lglQH~lamfg~~V~VPli----------vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~ 78 (451)
T COG2233 9 VDERLPLGKLLLLGLQHLLAMFGATVLVPLL----------VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGS 78 (451)
T ss_pred ccccCChHHHHHHHHHHHHHHHhcchHhhHH----------hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCccc
Q ss_pred hhHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCc
Q 013312 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE 139 (445)
Q Consensus 81 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~ 139 (445)
|-....+.-...++-.+.............+.+-+..|+ ......+.....+.+.+||
T Consensus 79 ~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~-~~~li~~~~~~~l~rlfPP 136 (451)
T COG2233 79 GLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGL-VYFLISPIVKIRLARLFPP 136 (451)
T ss_pred CCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCC
No 347
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=22.51 E-value=2e+02 Score=25.38 Aligned_cols=61 Identities=21% Similarity=0.259 Sum_probs=43.9
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHH---------Hhhhhhcchh
Q 013312 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMP---------LLAPILGEAK 314 (445)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~---------~l~~~~~~~~ 314 (445)
-+.-+..........+++-.|+++ .|.++...+.++....+...+.. ++.| +-.||+|||+
T Consensus 23 GvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st-~ftGi~~d~nll~~~idr~G~~~ 92 (412)
T KOG4830|consen 23 GVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAIST-PFTGIFSDSNLLPACIDRIGRRM 92 (412)
T ss_pred chhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhc-ccccccccccccHHHhhhhccee
Confidence 444556666666777888888888 58898888888888888877776 4333 3457888874
No 348
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=22.45 E-value=2.4e+02 Score=18.66 Aligned_cols=29 Identities=10% Similarity=0.198 Sum_probs=14.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhccCCCCC
Q 013312 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (445)
Q Consensus 169 w~~~f~~~~~~~~i~~~~~~~~~~e~~~~ 197 (445)
|...+.+...+.++.+-.+-..+||..++
T Consensus 30 ~Aav~~~~~~~~l~~~~~iG~~LPe~s~~ 58 (67)
T PF11511_consen 30 YAAVFFLGLWFLLVALYFIGLLLPERSRQ 58 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSTTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchhccc
Confidence 33444444444344444444678886544
No 349
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=22.20 E-value=7.2e+02 Score=24.02 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=24.1
Q ss_pred CccchhhHHHHHHHHHhhhhhhhhhhhhhhc
Q 013312 138 SERQRASAFGILLGVLSASFVCGTLAARFLS 168 (445)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~~~ 168 (445)
.+++.+...++...+.+.|.+.-|+..+..|
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~G 48 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGFGG 48 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhcch
Confidence 3456677888888888888888888877754
No 350
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=22.07 E-value=1.5e+02 Score=21.84 Aligned_cols=29 Identities=10% Similarity=-0.026 Sum_probs=21.4
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHhccCCC
Q 013312 167 LSTTSAFQAATIVSMLAAAYMRVFLKDDV 195 (445)
Q Consensus 167 ~~w~~~f~~~~~~~~i~~~~~~~~~~e~~ 195 (445)
.+|+.+|++...++++.+.+.+.+.||+.
T Consensus 57 e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 57 EGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 48899998877777776666666777654
No 351
>PF04964 Flp_Fap: Flp/Fap pilin component; InterPro: IPR007047 This entry is for the fimbriae associated protein Flp/Fap pilin component.
Probab=21.35 E-value=1.5e+02 Score=17.85 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=21.1
Q ss_pred HHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 013312 273 LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI 309 (445)
Q Consensus 273 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 309 (445)
++|+-|-+..+++++.....+..+.+..-+++.+.++
T Consensus 2 ~~de~GaTaiEYali~alia~~ii~~~~~~g~~~~~~ 38 (46)
T PF04964_consen 2 LRDERGATAIEYALIAALIAVAIIAAVTNLGTALNTA 38 (46)
T ss_pred CcccccchHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3455677788888877766665554432333333333
No 352
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=21.15 E-value=6.5e+02 Score=23.95 Aligned_cols=196 Identities=9% Similarity=-0.049 Sum_probs=0.0
Q ss_pred cchhhHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHhhhhccccccccCch
Q 013312 2 GMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK 81 (445)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr 81 (445)
+.+....+.....+..++..+++.-.+.....-..+. .-.....+.....++-+...+.|+.-+|
T Consensus 188 ~~~~~~~n~~~~~lGt~lLw~gW~gFN~Gs~~~~~~~---------------~~~a~~nT~lA~a~g~l~~~~~~~~~~g 252 (403)
T TIGR00836 188 PVAIRPHNVPLVVLGTFILWFGWFGFNAGSALAANGT---------------AAYAAVNTNLAAAAGGLTWLLIDWLKHG 252 (403)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhcccchhhcccchH---------------HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q ss_pred hHhHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHhhhccchhHHHHHHHHHhcCCCccchhhHHHHHHHHHhhhhhhhh
Q 013312 82 AMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (445)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 161 (445)
|.=.....--.++.+....+.. -..--..-++.|+ .++........++.+..+-++---+...+....-+|.+..+
T Consensus 253 k~~~~~~~nG~LAGLVaita~a---~~v~p~~A~viG~-iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~g 328 (403)
T TIGR00836 253 KPTLLGACNGILAGLVAITPGC---GVVTPWGAIIIGL-VAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATG 328 (403)
T ss_pred CCCHHHHHhhhhhhheeecCCC---CCCCHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHH
Q ss_pred hhh-----------------hhhchhhH-HHHHHHHHHHHHHHHHHhccCCCCCCCCcCCccccchhhhcccc
Q 013312 162 LAA-----------------RFLSTTSA-FQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVN 216 (445)
Q Consensus 162 ~l~-----------------~~~~w~~~-f~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 216 (445)
+.+ ..+++|.. -.+....+.+......+.++....-+..+++++.-.+..+...+
T Consensus 329 lfa~~~~~~~~~g~~~~~~~~~l~~Ql~g~~~~~~~s~~~~~ii~~il~~~~~lRv~~e~E~~GlD~~~hg~~ 401 (403)
T TIGR00836 329 LFAAPKVGGVGTGGLLGGNGKQLGVQLIGIAAIIAWAFVVTFIILKILDKTIGLRVSEEEEKIGLDLAEHGEF 401 (403)
T ss_pred HhcccccccccCCccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHhCCChhhhCcc
No 353
>COG3619 Predicted membrane protein [Function unknown]
Probab=21.10 E-value=5.4e+02 Score=22.14 Aligned_cols=27 Identities=11% Similarity=-0.006 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHhhhhccccccccCc
Q 013312 54 GFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (445)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 80 (445)
........+...++......+..|..|
T Consensus 58 a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 58 AVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444444455555554444444444443
No 354
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=21.03 E-value=1.2e+02 Score=20.59 Aligned_cols=29 Identities=17% Similarity=0.147 Sum_probs=24.1
Q ss_pred ccccCchhHhHHHHHHHHHHHHHHHhhcC
Q 013312 75 SDQYGRKAMLTLPLTLSIIPLAILAYRRS 103 (445)
Q Consensus 75 ~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 103 (445)
-|+-.|++-+.+.+.+-..+.++..+...
T Consensus 11 ~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~ 39 (73)
T PF11298_consen 11 QDQRRRRRRYLIMMGIRIPCFVLAAVVYR 39 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46778899999999998888888888776
No 355
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=20.38 E-value=5.6e+02 Score=22.02 Aligned_cols=51 Identities=12% Similarity=0.118 Sum_probs=33.2
Q ss_pred HHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHH
Q 013312 273 LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (445)
Q Consensus 273 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (445)
+.+..+.++.+.|..........+ +....+.||.+.++....|.....++.
T Consensus 122 ~a~~~~~s~~~ig~~~g~if~i~i----l~ss~i~r~~~~~~p~~LG~~Mi~~Gl 172 (224)
T PF09930_consen 122 LAPSIGLSGWEIGLVLGLIFFILI----LLSSFIFRRLKKPYPIILGNFMIFLGL 172 (224)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHH----HHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 334578888888887765555544 344677778886666666666655554
No 356
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.17 E-value=60 Score=24.93 Aligned_cols=15 Identities=27% Similarity=0.191 Sum_probs=7.1
Q ss_pred hhHHHHHHHHHHHHH
Q 013312 170 TSAFQAATIVSMLAA 184 (445)
Q Consensus 170 ~~~f~~~~~~~~i~~ 184 (445)
||++++..++.++++
T Consensus 1 RW~l~~iii~~i~l~ 15 (130)
T PF12273_consen 1 RWVLFAIIIVAILLF 15 (130)
T ss_pred CeeeHHHHHHHHHHH
Confidence 455555444443333
Done!