Query 013317
Match_columns 445
No_of_seqs 171 out of 1485
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 08:18:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3otr_A Enolase; structural gen 100.0 5E-105 2E-109 801.3 45.3 442 1-443 1-445 (452)
2 3qtp_A Enolase 1; glycolysis, 100.0 3E-102 1E-106 781.7 47.6 432 2-442 6-440 (441)
3 3uj2_A Enolase 1; enzyme funct 100.0 3.4E-95 1.2E-99 743.7 45.8 419 2-437 26-447 (449)
4 3tqp_A Enolase; energy metabol 100.0 7.9E-95 2.7E-99 737.7 47.4 415 2-437 3-421 (428)
5 3qn3_A Enolase; structural gen 100.0 5.9E-95 2E-99 736.4 44.2 408 1-429 4-411 (417)
6 2al1_A Enolase 1, 2-phospho-D- 100.0 1.7E-92 5.7E-97 724.3 44.8 429 3-442 1-434 (436)
7 2akz_A Gamma enolase, neural; 100.0 7.6E-92 2.6E-96 720.0 44.5 428 3-442 1-431 (439)
8 2ptz_A Enolase; lyase, glycoly 100.0 1.8E-87 6.1E-92 688.6 46.9 427 1-438 3-431 (432)
9 2fym_A Enolase; RNA degradosom 100.0 2.9E-82 9.8E-87 651.5 46.5 421 2-441 1-430 (431)
10 2pa6_A Enolase; glycolysis, ly 100.0 8.5E-82 2.9E-86 647.9 47.1 418 2-441 9-426 (427)
11 1w6t_A Enolase; bacterial infe 100.0 6.1E-82 2.1E-86 650.5 45.5 422 1-440 11-441 (444)
12 1kcz_A Beta-methylaspartase; b 100.0 3E-51 1E-55 419.3 22.0 330 19-429 51-411 (413)
13 1kko_A 3-methylaspartate ammon 100.0 7E-51 2.4E-55 416.0 22.5 331 19-428 51-410 (413)
14 4hnl_A Mandelate racemase/muco 100.0 5E-50 1.7E-54 411.4 25.4 313 2-399 26-350 (421)
15 3fcp_A L-Ala-D/L-Glu epimerase 100.0 5.2E-49 1.8E-53 398.7 28.4 304 1-401 4-321 (381)
16 3vcn_A Mannonate dehydratase; 100.0 2.8E-49 9.7E-54 405.3 26.6 311 1-398 23-355 (425)
17 3dgb_A Muconate cycloisomerase 100.0 1E-48 3.5E-53 396.5 29.0 304 3-403 7-324 (382)
18 3rcy_A Mandelate racemase/muco 100.0 7.5E-49 2.6E-53 402.6 26.5 317 1-398 1-327 (433)
19 2ox4_A Putative mandelate race 100.0 1.2E-48 4.2E-53 399.3 27.9 317 2-398 3-335 (403)
20 2qq6_A Mandelate racemase/muco 100.0 5.8E-49 2E-53 402.4 25.2 320 2-398 6-336 (410)
21 3v3w_A Starvation sensing prot 100.0 1.3E-48 4.4E-53 400.4 27.7 310 2-398 23-354 (424)
22 3tji_A Mandelate racemase/muco 100.0 7.7E-49 2.6E-53 401.5 25.9 311 2-398 27-350 (422)
23 3r4e_A Mandelate racemase/muco 100.0 1.4E-48 4.6E-53 399.7 27.1 310 1-398 16-348 (418)
24 3i4k_A Muconate lactonizing en 100.0 3.1E-48 1.1E-52 393.2 29.1 304 2-403 6-324 (383)
25 3r0u_A Enzyme of enolase super 100.0 1.5E-48 5E-53 394.4 26.4 297 1-397 2-314 (379)
26 3sbf_A Mandelate racemase / mu 100.0 1.7E-48 6E-53 397.2 26.9 311 2-398 6-329 (401)
27 4dwd_A Mandelate racemase/muco 100.0 3.1E-48 1.1E-52 393.8 28.2 311 2-402 3-318 (393)
28 3i6e_A Muconate cycloisomerase 100.0 3.4E-48 1.2E-52 393.1 27.6 303 1-403 7-322 (385)
29 3t6c_A RSPA, putative MAND fam 100.0 3E-48 1E-52 398.9 27.5 311 2-398 27-368 (440)
30 4hpn_A Putative uncharacterize 100.0 4.7E-48 1.6E-52 391.7 28.1 303 2-401 1-317 (378)
31 2gl5_A Putative dehydratase pr 100.0 6.9E-48 2.4E-52 394.6 27.9 319 1-398 2-344 (410)
32 4h1z_A Enolase Q92ZS5; dehydra 100.0 5.2E-48 1.8E-52 394.9 26.2 282 20-398 75-358 (412)
33 3sjn_A Mandelate racemase/muco 100.0 1.2E-47 4.2E-52 387.7 28.5 301 1-398 2-320 (374)
34 3my9_A Muconate cycloisomerase 100.0 3.5E-48 1.2E-52 392.2 24.2 303 1-402 5-320 (377)
35 4e4f_A Mannonate dehydratase; 100.0 1.1E-47 3.9E-52 393.3 26.9 312 1-399 22-357 (426)
36 3rr1_A GALD, putative D-galact 100.0 2.1E-47 7.2E-52 389.0 28.3 301 1-398 1-304 (405)
37 3jva_A Dipeptide epimerase; en 100.0 1.9E-47 6.4E-52 383.8 26.7 304 2-408 1-319 (354)
38 1wue_A Mandelate racemase/muco 100.0 1.2E-47 3.9E-52 389.7 25.3 306 1-408 19-336 (386)
39 4e5t_A Mandelate racemase / mu 100.0 3.1E-47 1.1E-51 388.2 28.2 321 2-398 2-332 (404)
40 2chr_A Chloromuconate cycloiso 100.0 3.2E-47 1.1E-51 384.6 27.8 305 2-403 1-318 (370)
41 2poz_A Putative dehydratase; o 100.0 1.2E-47 4.1E-52 390.5 24.5 316 1-399 2-326 (392)
42 1chr_A Chloromuconate cycloiso 100.0 1.1E-47 3.8E-52 387.8 23.9 304 2-402 1-317 (370)
43 2o56_A Putative mandelate race 100.0 2.8E-47 9.6E-52 389.7 26.8 318 2-399 4-342 (407)
44 4h83_A Mandelate racemase/muco 100.0 4.8E-47 1.6E-51 385.0 28.0 300 2-399 20-332 (388)
45 1tkk_A Similar to chloromucona 100.0 7.4E-47 2.5E-51 381.4 28.6 304 2-404 1-318 (366)
46 3ik4_A Mandelate racemase/muco 100.0 4.8E-47 1.6E-51 382.0 26.9 296 2-399 5-316 (365)
47 4e4u_A Mandalate racemase/muco 100.0 8.7E-47 3E-51 385.4 29.1 318 2-398 1-325 (412)
48 3mkc_A Racemase; metabolic pro 100.0 3.6E-47 1.2E-51 386.5 26.0 310 1-399 9-333 (394)
49 3dip_A Enolase; structural gen 100.0 1.2E-46 4.3E-51 384.2 30.1 319 2-399 4-340 (410)
50 3mwc_A Mandelate racemase/muco 100.0 1.2E-46 4.1E-51 383.2 29.9 311 1-409 6-340 (400)
51 3tcs_A Racemase, putative; PSI 100.0 7.2E-47 2.5E-51 383.0 27.9 303 1-399 22-326 (388)
52 3s5s_A Mandelate racemase/muco 100.0 5E-47 1.7E-51 384.6 26.0 297 2-399 5-317 (389)
53 1wuf_A Hypothetical protein LI 100.0 2.6E-47 8.9E-52 387.9 24.0 300 1-402 19-330 (393)
54 4dye_A Isomerase; enolase fami 100.0 2.7E-47 9.3E-52 387.3 23.7 303 1-401 23-338 (398)
55 3mqt_A Mandelate racemase/muco 100.0 1.2E-46 4.2E-51 382.8 27.9 309 2-399 5-328 (394)
56 3qld_A Mandelate racemase/muco 100.0 6E-47 2.1E-51 383.9 25.6 305 2-408 1-324 (388)
57 3q45_A Mandelate racemase/muco 100.0 8.7E-47 3E-51 380.7 26.4 303 2-405 1-316 (368)
58 3gd6_A Muconate cycloisomerase 100.0 1.6E-46 5.6E-51 381.4 28.3 309 2-402 1-316 (391)
59 3ro6_B Putative chloromuconate 100.0 2.2E-47 7.4E-52 383.6 21.4 303 2-404 1-316 (356)
60 3u9i_A Mandelate racemase/muco 100.0 2.7E-47 9.1E-52 387.0 21.7 301 2-399 27-346 (393)
61 3dg3_A Muconate cycloisomerase 100.0 1.9E-46 6.6E-51 378.1 27.7 296 2-398 1-311 (367)
62 2zad_A Muconate cycloisomerase 100.0 6.7E-47 2.3E-51 378.7 23.6 295 1-399 1-311 (345)
63 1nu5_A Chloromuconate cycloiso 100.0 2.5E-46 8.4E-51 378.1 27.5 305 2-404 1-319 (370)
64 4dxk_A Mandelate racemase / mu 100.0 1.2E-46 4E-51 383.4 25.3 323 2-399 1-337 (400)
65 3ozy_A Putative mandelate race 100.0 1.1E-46 3.8E-51 382.4 25.0 302 1-399 2-323 (389)
66 4e8g_A Enolase, mandelate race 100.0 3.9E-46 1.3E-50 378.2 28.6 299 1-399 22-335 (391)
67 3stp_A Galactonate dehydratase 100.0 9.7E-47 3.3E-51 384.6 24.1 302 2-399 23-352 (412)
68 3vc5_A Mandelate racemase/muco 100.0 3.2E-46 1.1E-50 383.4 27.2 315 1-398 22-357 (441)
69 2p8b_A Mandelate racemase/muco 100.0 1.6E-46 5.3E-51 379.4 24.4 304 2-404 1-317 (369)
70 3eez_A Putative mandelate race 100.0 3.6E-46 1.2E-50 377.4 27.0 295 1-399 2-314 (378)
71 3tj4_A Mandelate racemase; eno 100.0 2.1E-46 7.1E-51 378.4 25.1 304 2-399 1-321 (372)
72 4a35_A Mitochondrial enolase s 100.0 1.8E-46 6E-51 385.6 24.9 306 2-396 5-371 (441)
73 3fv9_G Mandelate racemase/muco 100.0 9.4E-46 3.2E-50 375.1 29.0 299 2-399 3-320 (386)
74 3ddm_A Putative mandelate race 100.0 3.6E-46 1.2E-50 378.7 25.9 300 1-399 9-327 (392)
75 3vdg_A Probable glucarate dehy 100.0 4.6E-46 1.6E-50 382.4 26.8 314 2-398 28-362 (445)
76 2ovl_A Putative racemase; stru 100.0 1.4E-45 4.8E-50 372.6 29.5 300 1-399 1-313 (371)
77 3toy_A Mandelate racemase/muco 100.0 4.1E-46 1.4E-50 377.2 25.6 296 2-399 27-335 (383)
78 3cyj_A Mandelate racemase/muco 100.0 9.4E-46 3.2E-50 374.0 27.1 293 2-399 6-311 (372)
79 3go2_A Putative L-alanine-DL-g 100.0 1.4E-45 4.7E-50 376.6 27.7 320 1-399 2-337 (409)
80 3ugv_A Enolase; enzyme functio 100.0 6.9E-46 2.4E-50 376.4 24.5 299 2-399 28-341 (390)
81 2ps2_A Putative mandelate race 100.0 2.4E-45 8.2E-50 371.0 27.3 295 1-398 3-313 (371)
82 2pp0_A L-talarate/galactarate 100.0 7.9E-46 2.7E-50 377.5 24.0 301 1-400 25-343 (398)
83 3ekg_A Mandelate racemase/muco 100.0 2E-45 7E-50 372.6 26.0 276 19-399 59-334 (404)
84 2qgy_A Enolase from the enviro 100.0 6E-45 2.1E-49 370.3 28.9 302 2-399 11-322 (391)
85 2pge_A MENC; OSBS, NYSGXRC, PS 100.0 3.4E-46 1.2E-50 377.7 18.7 315 1-405 2-342 (377)
86 2qde_A Mandelate racemase/muco 100.0 5.5E-45 1.9E-49 371.4 27.2 299 2-398 3-316 (397)
87 3bjs_A Mandelate racemase/muco 100.0 5.4E-45 1.9E-49 374.3 27.2 302 2-399 39-357 (428)
88 1sjd_A N-acylamino acid racema 100.0 1.2E-44 4.1E-49 365.5 29.3 294 2-397 1-306 (368)
89 2gdq_A YITF; mandelate racemas 100.0 6.9E-45 2.4E-49 368.8 27.5 297 2-402 4-313 (382)
90 1r0m_A N-acylamino acid racema 100.0 4.5E-45 1.6E-49 369.5 25.7 294 1-397 7-312 (375)
91 1rvk_A Isomerase/lactonizing e 100.0 1.1E-44 3.8E-49 367.5 27.9 306 2-400 1-324 (382)
92 3va8_A Probable dehydratase; e 100.0 7.4E-45 2.5E-49 373.4 25.9 312 2-398 27-360 (445)
93 2zc8_A N-acylamino acid racema 100.0 1.2E-44 4.1E-49 365.7 26.4 293 2-397 1-305 (369)
94 2qdd_A Mandelate racemase/muco 100.0 3E-44 1E-48 363.8 27.8 295 2-399 3-314 (378)
95 2nql_A AGR_PAT_674P, isomerase 100.0 2E-44 7E-49 366.1 26.3 281 20-398 52-332 (388)
96 2rdx_A Mandelate racemase/muco 100.0 7.3E-44 2.5E-48 361.1 29.9 297 2-401 3-314 (379)
97 2og9_A Mandelate racemase/muco 100.0 2.1E-44 7.1E-49 366.6 25.7 300 2-400 13-330 (393)
98 3fxg_A Rhamnonate dehydratase; 100.0 9.2E-45 3.2E-49 371.2 22.8 275 19-399 65-339 (455)
99 2pgw_A Muconate cycloisomerase 100.0 1.6E-44 5.6E-49 366.5 24.1 295 1-398 3-317 (384)
100 1mdl_A Mandelate racemase; iso 100.0 2.8E-44 9.4E-49 361.7 24.8 297 1-399 3-311 (359)
101 4h2h_A Mandelate racemase/muco 100.0 1E-43 3.5E-48 359.4 28.9 296 2-399 10-321 (376)
102 3p0w_A Mandelate racemase/muco 100.0 3.6E-44 1.2E-48 370.7 25.3 311 2-399 8-375 (470)
103 3mzn_A Glucarate dehydratase; 100.0 5.3E-44 1.8E-48 368.1 26.3 314 2-399 5-357 (450)
104 2p3z_A L-rhamnonate dehydratas 100.0 6.4E-44 2.2E-48 363.9 26.6 275 20-399 71-345 (415)
105 3pfr_A Mandelate racemase/muco 100.0 1.2E-43 4E-48 366.0 24.2 314 2-399 9-360 (455)
106 2hxt_A L-fuconate dehydratase; 100.0 2.7E-43 9.1E-48 363.5 23.4 304 1-395 1-365 (441)
107 1tzz_A Hypothetical protein L1 100.0 2E-42 7E-47 351.9 24.6 304 2-400 6-340 (392)
108 2hzg_A Mandelate racemase/muco 100.0 5.1E-43 1.7E-47 357.4 19.6 300 2-398 3-320 (401)
109 4g8t_A Glucarate dehydratase; 100.0 4.1E-42 1.4E-46 355.8 25.5 316 3-398 27-376 (464)
110 3ijl_A Muconate cycloisomerase 100.0 8.5E-43 2.9E-47 347.6 17.2 275 18-403 26-302 (338)
111 3v5c_A Mandelate racemase/muco 100.0 1.7E-41 5.7E-46 344.3 21.2 294 1-398 11-329 (392)
112 3p3b_A Mandelate racemase/muco 100.0 5.8E-42 2E-46 348.4 17.8 294 2-402 12-331 (392)
113 2oz8_A MLL7089 protein; struct 100.0 8.6E-41 2.9E-45 339.5 21.2 292 2-399 3-311 (389)
114 2okt_A OSB synthetase, O-succi 100.0 2.6E-40 8.8E-45 330.4 17.2 275 2-398 2-288 (342)
115 1jpd_X L-Ala-D/L-Glu epimerase 100.0 1.9E-39 6.6E-44 321.8 16.9 281 3-400 3-296 (324)
116 4gfi_A Mandelate racemase/muco 100.0 7.5E-36 2.6E-40 296.7 21.5 272 14-403 22-297 (329)
117 1r6w_A OSB synthase, O-succiny 100.0 5.5E-36 1.9E-40 296.6 12.7 267 2-399 1-284 (322)
118 2ozt_A TLR1174 protein; struct 100.0 1.4E-35 5E-40 294.7 14.5 283 18-429 28-324 (332)
119 3caw_A O-succinylbenzoate synt 100.0 5.3E-34 1.8E-38 283.4 18.2 252 1-396 1-268 (330)
120 2opj_A O-succinylbenzoate-COA 99.9 3.9E-26 1.3E-30 226.0 14.4 138 223-399 108-247 (327)
121 3hgj_A Chromate reductase; TIM 96.7 0.011 3.8E-07 58.2 12.0 72 277-352 234-317 (349)
122 1z41_A YQJM, probable NADH-dep 96.2 0.036 1.2E-06 54.3 11.9 73 277-353 224-307 (338)
123 3noy_A 4-hydroxy-3-methylbut-2 95.8 0.071 2.4E-06 51.8 11.6 98 280-383 44-142 (366)
124 3kru_A NADH:flavin oxidoreduct 95.8 0.068 2.3E-06 52.4 11.8 70 278-352 226-306 (343)
125 3l5l_A Xenobiotic reductase A; 95.2 0.057 2E-06 53.4 9.0 70 279-352 243-324 (363)
126 1ps9_A 2,4-dienoyl-COA reducta 95.0 0.071 2.4E-06 57.1 9.6 72 277-352 223-309 (671)
127 3aty_A Tcoye, prostaglandin F2 94.9 0.081 2.8E-06 52.6 9.1 70 278-353 262-336 (379)
128 1icp_A OPR1, 12-oxophytodienoa 94.8 0.056 1.9E-06 53.7 7.6 69 279-352 253-329 (376)
129 1vyr_A Pentaerythritol tetrani 93.7 0.37 1.3E-05 47.5 10.9 70 279-353 248-323 (364)
130 2r14_A Morphinone reductase; H 92.8 0.45 1.5E-05 47.2 9.9 70 278-352 251-327 (377)
131 2gou_A Oxidoreductase, FMN-bin 92.7 0.63 2.1E-05 45.9 10.8 71 278-353 246-322 (365)
132 3gr7_A NADPH dehydrogenase; fl 92.7 0.52 1.8E-05 46.0 10.1 71 278-352 225-306 (340)
133 3gka_A N-ethylmaleimide reduct 92.5 0.37 1.3E-05 47.4 8.8 67 281-352 249-315 (361)
134 4ab4_A Xenobiotic reductase B; 92.4 0.39 1.3E-05 47.3 8.7 67 281-352 241-307 (362)
135 3lab_A Putative KDPG (2-keto-3 91.2 0.47 1.6E-05 43.1 7.2 109 280-405 23-138 (217)
136 2hsa_B 12-oxophytodienoate red 90.1 0.8 2.7E-05 45.7 8.4 71 278-353 256-348 (402)
137 3l5a_A NADH/flavin oxidoreduct 88.3 2.5 8.6E-05 42.4 10.6 71 278-352 260-345 (419)
138 4e38_A Keto-hydroxyglutarate-a 86.7 1.4 4.8E-05 40.5 7.1 109 280-405 44-153 (232)
139 1ydn_A Hydroxymethylglutaryl-C 86.5 3.1 0.00011 39.4 9.7 123 278-407 22-176 (295)
140 1f76_A Dihydroorotate dehydrog 85.6 3.1 0.00011 40.1 9.3 44 309-354 276-319 (336)
141 1wa3_A 2-keto-3-deoxy-6-phosph 83.3 5.3 0.00018 35.2 9.2 110 280-405 20-130 (205)
142 1o94_A Tmadh, trimethylamine d 83.3 4.5 0.00015 43.4 10.2 42 308-352 279-320 (729)
143 3k30_A Histamine dehydrogenase 80.3 6.5 0.00022 41.8 10.1 71 277-352 239-323 (690)
144 3f4w_A Putative hexulose 6 pho 79.3 22 0.00075 31.2 11.9 119 280-406 11-134 (211)
145 4af0_A Inosine-5'-monophosphat 79.3 10 0.00035 39.0 10.5 94 309-409 310-416 (556)
146 1i4n_A Indole-3-glycerol phosp 78.4 9 0.00031 35.4 9.1 97 279-382 61-158 (251)
147 4g9p_A 4-hydroxy-3-methylbut-2 77.6 8.8 0.0003 37.9 9.1 87 295-384 52-147 (406)
148 2e6f_A Dihydroorotate dehydrog 74.9 10 0.00035 36.0 8.8 43 309-354 232-274 (314)
149 3ble_A Citramalate synthase fr 70.4 42 0.0014 32.2 12.0 125 278-407 37-190 (337)
150 3eeg_A 2-isopropylmalate synth 70.4 22 0.00074 34.1 9.9 147 278-428 24-194 (325)
151 1vr6_A Phospho-2-dehydro-3-deo 68.4 87 0.003 30.2 13.7 91 282-380 156-247 (350)
152 1pii_A N-(5'phosphoribosyl)ant 66.9 13 0.00043 37.6 7.6 97 278-381 67-164 (452)
153 1ydo_A HMG-COA lyase; TIM-barr 66.5 37 0.0013 32.2 10.5 123 278-407 24-178 (307)
154 3tsm_A IGPS, indole-3-glycerol 64.7 21 0.00071 33.4 8.2 95 278-381 78-176 (272)
155 3tdn_A FLR symmetric alpha-bet 64.6 10 0.00036 34.5 6.1 44 306-353 65-108 (247)
156 1nvm_A HOA, 4-hydroxy-2-oxoval 64.2 65 0.0022 30.9 12.1 127 277-408 25-171 (345)
157 1jub_A Dihydroorotate dehydrog 64.0 19 0.00066 33.9 8.1 47 309-357 229-275 (311)
158 2ftp_A Hydroxymethylglutaryl-C 63.8 36 0.0012 32.1 9.9 123 278-407 26-180 (302)
159 3igs_A N-acetylmannosamine-6-p 61.1 34 0.0012 30.9 8.9 111 280-403 34-153 (232)
160 1vhn_A Putative flavin oxidore 61.1 7.8 0.00027 37.0 4.7 62 289-355 146-215 (318)
161 3zwt_A Dihydroorotate dehydrog 60.8 30 0.001 33.7 8.9 45 309-355 285-329 (367)
162 3b0p_A TRNA-dihydrouridine syn 60.1 82 0.0028 30.2 11.9 67 280-352 142-224 (350)
163 3nvt_A 3-deoxy-D-arabino-heptu 59.1 73 0.0025 31.2 11.4 94 279-381 190-284 (385)
164 3tml_A 2-dehydro-3-deoxyphosph 58.9 28 0.00096 32.8 8.0 87 280-374 72-158 (288)
165 1zco_A 2-dehydro-3-deoxyphosph 58.8 52 0.0018 30.4 9.8 92 282-381 73-165 (262)
166 2c6q_A GMP reductase 2; TIM ba 56.6 88 0.003 30.1 11.4 92 309-408 149-254 (351)
167 1vs1_A 3-deoxy-7-phosphoheptul 56.4 72 0.0025 29.7 10.3 92 282-381 88-180 (276)
168 2cw6_A Hydroxymethylglutaryl-C 56.0 46 0.0016 31.2 9.1 124 277-407 22-177 (298)
169 2r6o_A Putative diguanylate cy 54.6 1.4E+02 0.0046 27.8 12.9 82 312-404 169-259 (294)
170 2wqp_A Polysialic acid capsule 52.1 34 0.0012 33.2 7.5 36 279-315 88-123 (349)
171 4ef8_A Dihydroorotate dehydrog 50.9 62 0.0021 31.3 9.2 45 307-354 263-307 (354)
172 2qkf_A 3-deoxy-D-manno-octulos 50.5 69 0.0024 29.9 9.2 95 280-382 70-165 (280)
173 3sz8_A 2-dehydro-3-deoxyphosph 49.4 58 0.002 30.5 8.4 36 278-313 73-108 (285)
174 1yxy_A Putative N-acetylmannos 48.9 86 0.003 27.8 9.5 43 305-352 172-214 (234)
175 1vzw_A Phosphoribosyl isomeras 48.6 47 0.0016 29.8 7.6 44 307-353 177-222 (244)
176 3ivs_A Homocitrate synthase, m 47.9 2E+02 0.0068 28.5 12.5 126 277-407 56-201 (423)
177 1h7n_A 5-aminolaevulinic acid 47.8 91 0.0031 29.8 9.4 131 226-381 183-329 (342)
178 1pv8_A Delta-aminolevulinic ac 47.1 76 0.0026 30.2 8.7 108 226-348 172-295 (330)
179 4avf_A Inosine-5'-monophosphat 46.7 1.5E+02 0.005 29.9 11.7 111 289-407 235-362 (490)
180 3ewb_X 2-isopropylmalate synth 46.1 1.2E+02 0.0041 28.3 10.2 146 278-427 23-192 (293)
181 3q58_A N-acetylmannosamine-6-p 45.0 60 0.0021 29.2 7.7 111 280-403 34-153 (229)
182 3oix_A Putative dihydroorotate 44.9 76 0.0026 30.5 8.8 57 309-367 262-319 (345)
183 1o60_A 2-dehydro-3-deoxyphosph 44.7 88 0.003 29.4 9.0 94 281-382 74-168 (292)
184 4a3u_A NCR, NADH\:flavin oxido 44.2 81 0.0028 30.4 8.9 37 312-352 278-314 (358)
185 3fs2_A 2-dehydro-3-deoxyphosph 44.1 54 0.0018 31.0 7.3 88 279-374 95-182 (298)
186 3rmj_A 2-isopropylmalate synth 43.6 73 0.0025 31.0 8.5 128 278-409 30-180 (370)
187 1w1z_A Delta-aminolevulinic ac 43.1 1.4E+02 0.0046 28.4 9.7 107 226-348 174-295 (328)
188 3nav_A Tryptophan synthase alp 42.7 2E+02 0.0067 26.6 11.0 117 280-405 32-179 (271)
189 3ffs_A Inosine-5-monophosphate 41.9 1.5E+02 0.005 29.2 10.4 91 309-407 173-276 (400)
190 3igs_A N-acetylmannosamine-6-p 41.7 1.8E+02 0.0061 26.0 10.3 41 307-352 169-209 (232)
191 3q58_A N-acetylmannosamine-6-p 41.3 1.6E+02 0.0056 26.3 10.0 41 307-352 169-209 (229)
192 1vhc_A Putative KHG/KDPG aldol 41.3 1.5E+02 0.0051 26.4 9.7 109 280-405 27-136 (224)
193 1wa3_A 2-keto-3-deoxy-6-phosph 41.0 1.1E+02 0.0039 26.3 8.8 76 295-382 82-158 (205)
194 1qop_A Tryptophan synthase alp 40.5 82 0.0028 28.9 8.0 92 280-378 29-151 (268)
195 1l6s_A Porphobilinogen synthas 40.5 1.1E+02 0.0037 29.0 8.6 107 226-348 168-288 (323)
196 3khj_A Inosine-5-monophosphate 40.2 1.9E+02 0.0065 27.8 10.9 91 309-407 134-237 (361)
197 2nwr_A 2-dehydro-3-deoxyphosph 40.0 1.2E+02 0.0042 27.9 9.1 96 279-382 58-154 (267)
198 1ujp_A Tryptophan synthase alp 40.0 1.1E+02 0.0039 28.1 8.9 89 310-406 81-174 (271)
199 3jr2_A Hexulose-6-phosphate sy 40.0 1.6E+02 0.0056 25.7 9.7 93 280-378 17-113 (218)
200 1geq_A Tryptophan synthase alp 39.8 1.2E+02 0.004 27.1 8.9 45 304-352 175-219 (248)
201 3qja_A IGPS, indole-3-glycerol 39.8 43 0.0015 31.2 5.9 114 279-406 72-189 (272)
202 1jvn_A Glutamine, bifunctional 39.4 27 0.00092 36.1 4.9 68 307-377 483-550 (555)
203 1vrd_A Inosine-5'-monophosphat 38.8 2.1E+02 0.007 28.7 11.4 93 307-406 264-369 (494)
204 4f3h_A Fimxeal, putative uncha 37.9 1.8E+02 0.0063 25.8 9.9 63 323-389 157-226 (250)
205 1vli_A Spore coat polysacchari 37.7 61 0.0021 31.8 6.8 35 279-314 98-132 (385)
206 1wbh_A KHG/KDPG aldolase; lyas 37.5 1.7E+02 0.0056 25.9 9.3 109 280-405 26-135 (214)
207 1mzh_A Deoxyribose-phosphate a 37.4 97 0.0033 27.6 7.8 68 279-349 129-200 (225)
208 4fo4_A Inosine 5'-monophosphat 37.0 1.9E+02 0.0065 28.0 10.3 92 309-407 137-241 (366)
209 2w6r_A Imidazole glycerol phos 36.6 36 0.0012 31.0 4.8 66 308-377 188-253 (266)
210 2vp8_A Dihydropteroate synthas 36.2 1.6E+02 0.0055 27.9 9.4 114 245-385 44-171 (318)
211 3qtg_A Pyruvate kinase, PK; TI 35.7 1.9E+02 0.0066 28.9 10.2 126 278-406 178-322 (461)
212 2agk_A 1-(5-phosphoribosyl)-5- 35.5 41 0.0014 31.0 5.0 46 307-355 188-238 (260)
213 1ka9_F Imidazole glycerol phos 35.5 41 0.0014 30.3 5.0 66 308-377 184-249 (252)
214 3usb_A Inosine-5'-monophosphat 35.1 2E+02 0.007 29.1 10.6 100 302-408 278-390 (511)
215 4fxs_A Inosine-5'-monophosphat 35.1 2.6E+02 0.009 28.1 11.4 95 307-408 258-365 (496)
216 3t05_A Pyruvate kinase, PK; te 34.7 1.4E+02 0.0048 31.1 9.3 125 278-406 190-332 (606)
217 3qfe_A Putative dihydrodipicol 33.2 2.3E+02 0.0079 26.6 10.1 125 225-381 63-202 (318)
218 3g8r_A Probable spore coat pol 32.2 79 0.0027 30.6 6.5 35 280-315 76-110 (350)
219 3oa3_A Aldolase; structural ge 31.9 1.2E+02 0.004 28.5 7.4 86 279-377 185-279 (288)
220 3gg8_A Pyruvate kinase; malari 31.6 1.2E+02 0.0043 30.7 8.1 125 278-405 204-346 (511)
221 1w8s_A FBP aldolase, fructose- 31.4 61 0.0021 29.8 5.4 71 338-409 98-182 (263)
222 2ekc_A AQ_1548, tryptophan syn 31.2 3E+02 0.01 24.9 12.6 116 280-405 29-176 (262)
223 1vc4_A Indole-3-glycerol phosp 31.1 87 0.003 28.6 6.4 93 279-381 65-161 (254)
224 1jcn_A Inosine monophosphate d 31.1 2.6E+02 0.0088 28.2 10.6 108 293-407 264-388 (514)
225 3obk_A Delta-aminolevulinic ac 31.0 2E+02 0.007 27.5 8.9 107 226-348 187-309 (356)
226 1w5q_A Delta-aminolevulinic ac 30.8 3.3E+02 0.011 25.9 10.2 107 226-348 179-302 (337)
227 3s83_A Ggdef family protein; s 30.5 2.9E+02 0.0099 24.5 12.7 63 323-389 153-222 (259)
228 3vk5_A MOEO5; TIM barrel, tran 30.3 2E+02 0.0067 26.9 8.6 63 288-355 191-258 (286)
229 3ajx_A 3-hexulose-6-phosphate 30.0 2.6E+02 0.0089 23.9 12.2 93 280-379 11-108 (207)
230 1vzw_A Phosphoribosyl isomeras 30.0 2.9E+02 0.0098 24.3 10.2 41 310-354 65-105 (244)
231 1mxs_A KDPG aldolase; 2-keto-3 29.6 1.5E+02 0.005 26.6 7.6 109 280-405 36-145 (225)
232 2cu0_A Inosine-5'-monophosphat 29.2 1.5E+02 0.005 29.8 8.4 91 309-409 257-360 (486)
233 3iwp_A Copper homeostasis prot 29.2 72 0.0025 29.9 5.5 95 330-425 44-152 (287)
234 1eep_A Inosine 5'-monophosphat 29.1 2.7E+02 0.0091 27.0 10.1 91 309-406 182-285 (404)
235 3t7v_A Methylornithine synthas 29.0 3.1E+02 0.011 25.7 10.4 108 279-393 91-222 (350)
236 3gr4_A Pyruvate kinase isozyme 28.7 1.9E+02 0.0064 29.7 8.9 124 278-405 239-380 (550)
237 1i4n_A Indole-3-glycerol phosp 28.7 1.1E+02 0.0038 27.9 6.7 56 295-353 172-230 (251)
238 1thf_D HISF protein; thermophI 28.2 49 0.0017 29.8 4.2 66 308-377 183-248 (253)
239 4hb7_A Dihydropteroate synthas 27.8 2.8E+02 0.0094 25.6 9.1 115 244-385 8-136 (270)
240 2qr6_A IMP dehydrogenase/GMP r 27.4 1.6E+02 0.0055 28.5 8.0 40 308-352 199-238 (393)
241 1yxy_A Putative N-acetylmannos 27.4 1.4E+02 0.0049 26.3 7.2 108 283-403 37-157 (234)
242 1pii_A N-(5'phosphoribosyl)ant 27.0 3E+02 0.01 27.5 9.9 101 227-365 144-250 (452)
243 3fdb_A Beta C-S lyase, putativ 26.8 2.1E+02 0.0073 26.5 8.7 94 282-381 91-190 (377)
244 1y0e_A Putative N-acetylmannos 26.3 75 0.0026 27.9 5.0 42 308-353 163-204 (223)
245 1qo2_A Molecule: N-((5-phospho 26.3 77 0.0026 28.3 5.1 42 308-352 176-222 (241)
246 2ztj_A Homocitrate synthase; ( 26.1 4.5E+02 0.015 25.3 11.2 123 277-405 20-163 (382)
247 3khd_A Pyruvate kinase; malari 25.4 2E+02 0.0068 29.3 8.3 125 278-405 213-355 (520)
248 3nmy_A Xometc, cystathionine g 25.4 1.4E+02 0.0047 29.0 7.1 94 283-382 93-190 (400)
249 1gvf_A Tagatose-bisphosphate a 25.4 1.6E+02 0.0054 27.5 7.1 65 313-382 67-138 (286)
250 3e96_A Dihydrodipicolinate syn 25.0 3.7E+02 0.013 25.1 9.9 123 225-381 64-195 (316)
251 3glc_A Aldolase LSRF; TIM barr 24.8 1.7E+02 0.006 27.3 7.4 70 338-408 131-211 (295)
252 1h5y_A HISF; histidine biosynt 24.7 82 0.0028 27.9 5.0 42 308-353 65-106 (253)
253 1wv2_A Thiazole moeity, thiazo 24.2 1E+02 0.0035 28.5 5.4 60 289-353 149-216 (265)
254 1rpx_A Protein (ribulose-phosp 24.1 2.6E+02 0.009 24.4 8.3 69 308-382 56-126 (230)
255 2i9x_A Putative septation prot 23.8 91 0.0031 23.7 4.2 27 2-29 4-30 (87)
256 1h5y_A HISF; histidine biosynt 23.7 84 0.0029 27.8 4.9 66 308-377 186-251 (253)
257 4drs_A Pyruvate kinase; glycol 23.6 2.5E+02 0.0087 28.6 8.8 126 278-406 212-362 (526)
258 3r2g_A Inosine 5'-monophosphat 23.6 3.2E+02 0.011 26.3 9.2 41 309-353 129-169 (361)
259 3sy8_A ROCR; TIM barrel phosph 22.6 4.1E+02 0.014 25.3 10.0 72 311-389 281-359 (400)
260 1tv5_A Dhodehase, dihydroorota 22.5 84 0.0029 31.4 4.9 45 309-355 360-404 (443)
261 3hqn_D Pyruvate kinase, PK; TI 22.3 2.1E+02 0.0071 29.0 7.7 124 278-405 189-330 (499)
262 3kki_A CAI-1 autoinducer synth 22.1 3.7E+02 0.013 25.3 9.6 85 289-381 137-223 (409)
263 3txv_A Probable tagatose 6-pho 22.1 3.5E+02 0.012 27.0 9.2 34 396-429 279-312 (450)
264 3vnd_A TSA, tryptophan synthas 22.0 4.6E+02 0.016 23.9 11.2 117 280-405 30-177 (267)
265 2nli_A Lactate oxidase; flavoe 21.9 4.8E+02 0.016 25.0 10.2 94 307-408 216-315 (368)
266 3e9k_A Kynureninase; kynurenin 21.8 1.8E+02 0.0063 28.3 7.4 100 281-380 137-250 (465)
267 3i65_A Dihydroorotate dehydrog 21.7 46 0.0016 33.0 2.7 45 309-355 332-376 (415)
268 3f9t_A TDC, L-tyrosine decarbo 21.7 1.7E+02 0.0057 27.3 6.8 83 295-381 123-208 (397)
269 2yci_X 5-methyltetrahydrofolat 21.6 4.6E+02 0.016 24.0 9.5 60 314-382 72-133 (271)
270 3gbx_A Serine hydroxymethyltra 21.3 1E+02 0.0035 29.3 5.3 49 333-381 156-204 (420)
271 2d73_A Alpha-glucosidase SUSB; 21.2 2E+02 0.0068 30.7 7.6 93 335-427 370-500 (738)
272 4fb5_A Probable oxidoreductase 21.1 1.2E+02 0.0042 28.7 5.8 47 335-383 108-154 (393)
273 2fli_A Ribulose-phosphate 3-ep 21.0 2.3E+02 0.0079 24.4 7.2 67 309-381 50-116 (220)
274 3s1x_A Probable transaldolase; 21.0 4.5E+02 0.015 23.4 11.3 91 280-376 65-160 (223)
275 3nvt_A 3-deoxy-D-arabino-heptu 20.6 5.8E+02 0.02 24.6 11.1 113 280-404 154-281 (385)
276 4eb5_C NIFU protein (NIFU-1); 20.5 1E+02 0.0035 26.0 4.3 63 72-140 66-131 (153)
277 1eye_A DHPS 1, dihydropteroate 20.2 3.7E+02 0.013 24.8 8.6 114 245-384 8-134 (280)
No 1
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=100.00 E-value=5e-105 Score=801.27 Aligned_cols=442 Identities=61% Similarity=1.010 Sum_probs=425.1
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcc-cCCccHHHHHHHHHHhHhhhcc
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWD-YHGRGVLKAVQNVNSIIGPALV 79 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~-y~~~~~~~a~~~i~~~l~p~Li 79 (445)
|++|++|.+|+|+||+|+|||+|+|+|++|.+ ++++|+|+|||.+|+.+++|+++. |.|+++.++++.||+.|+|.|+
T Consensus 1 m~~I~~i~areildSrGnpTvEv~v~~~~G~~-ra~vPsGaStG~~Ea~elrD~d~~~y~Gkgv~kAv~~vn~~Iap~Li 79 (452)
T 3otr_A 1 MVVIKDIVAREILDSRGNPTIEVDVSTEGGVF-RAAVPSGASTGIYEALELRDKDPKRYLGKGVLNAVEIVRQEIKPALL 79 (452)
T ss_dssp CCCCCEEEEEEEECTTSCEEEEEEEEETTEEE-EEECCCCBSSCSSSCBCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT
T ss_pred CCcceEEEEEEEEcCCCCEEEEEEEEECCccE-EEeccccCCCCcceEEeecCCCcccccCccHHHHHHHHHHHHHHHHc
Confidence 77999999999999999999999999999987 999999999999999999999865 9999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCC--cceeeeeeEEe
Q 013317 80 GKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNK--TLVLPVPAFNV 157 (445)
Q Consensus 80 G~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~--~~~ip~p~~~~ 157 (445)
|+|+.+|++||+.|.+.++|++|+|||+++.+|.||+.|||+|++.+.|+..|+|||+|||.+.|.. ...+|+|++++
T Consensus 80 g~d~~dQ~~iD~~m~~~lDgT~n~~~~~ks~lGaNail~vSlAvakAaA~~~~~PLy~yi~~l~g~~~~~~~lPvP~~nv 159 (452)
T 3otr_A 80 GKDPCDQKGIDMLMVEQLDGTKNEWGYSKSKLGANAILGVSIACCRAGAASKGLPLYKYIATLAGKTIDKMVMPVPFFNV 159 (452)
T ss_dssp TCCTTCHHHHHHHHHHTTTCCEETTEECCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSSSEEECEECEEE
T ss_pred CCChHhHHHHHHHHHHHhcCCCCcccccccccCcchhhHHHHHHHHHHHHhcCCcHHHHHHHhcCCCCcceecccceEEE
Confidence 9999999999999986899999999999999999999999999999999999999999999888865 56899999999
Q ss_pred ecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHH
Q 013317 158 INGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIA 237 (445)
Q Consensus 158 ~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~ 237 (445)
++||.|+++++++||||++|.++.+++|+++++.++|+++|+.||.|+|...+.+||+|||.|++++.++.|+.+.+|++
T Consensus 160 inGG~ha~n~l~~QEfmi~P~ga~sf~ealr~g~evyh~Lk~vl~~k~g~~~t~vgDEGgfap~~~~~~eaL~ll~~Ai~ 239 (452)
T 3otr_A 160 INGGEHAGNGLALQEFLIAPVGAPNIREAIRYGSETYHHLKNVIKNKYGLDATNVGDEGGFAPNVATAEEALNLLVEAIK 239 (452)
T ss_dssp EECGGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCCSHHHHHHHHHHHHH
T ss_pred ecCcccCCCCCCcCeEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998789999999999999999999999999999
Q ss_pred hcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHH
Q 013317 238 KGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTG 317 (445)
Q Consensus 238 ~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~ 317 (445)
++||+++|.|++|+++++||++++++|+++|++++.+.++.+|++|++++|.+++++|||.||||||+++|+++|++|++
T Consensus 240 ~aGy~~~i~i~lD~Aasefy~~~~g~Y~l~fk~~~~~~~~~~t~~Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~Lt~ 319 (452)
T 3otr_A 240 AAGYEGKIKIAFDAAASEFYKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFTK 319 (452)
T ss_dssp HHTCTTTSEEEEECCGGGGEETTTTEEETTTTCSSCCGGGEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHH
T ss_pred HcCCCceEEEccccchHhheeccCCeEEeeccCCCCcccccccHHHHHHHHHHHHhhhCceEEecCCChhhHHHHHHHHH
Confidence 99998899999999999999876789999998776666678999999999999999999999999999999999999999
Q ss_pred HhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhh
Q 013317 318 KIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVG 397 (445)
Q Consensus 318 ~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a 397 (445)
+++.++||+|||++++++++++++++.++||+++||++|+||||++++++++|+++|+.+|+||+++||+|++++|||||
T Consensus 320 ~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvnQIGgITEalka~~lA~~~G~~vmvshrSGETeD~~iAdLaVg 399 (452)
T 3otr_A 320 DVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLKVNQIGSVTEAIEACLLAQKSGWGVQVSHRSGETEDSFIADLVVG 399 (452)
T ss_dssp HHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHH
T ss_pred hhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEeeccccccHHHHHHHHHHHHHcCCeEEEeCCCCCCchhHHHHHHHH
Confidence 99878999999998899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccccCCCCCchhHHHHHHHHHHHHHhCCCccccCccCCCCCC
Q 013317 398 LATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTKFRTPVQ 443 (445)
Q Consensus 398 ~~~~~~~~G~~~~~er~~k~n~ll~i~~~l~~~~~~~~~~~~~~~~ 443 (445)
++++|||.|+|+|+||++||||||||||||++.+.|.|++||+|-.
T Consensus 400 l~~gqIKtGap~rsER~aKyNqLlrIeeelg~~a~~~g~~~~~~~~ 445 (452)
T 3otr_A 400 LRCGQIKSGSPCRSERLCKYNQLMRIEESLGADCVYAGESFRHPKR 445 (452)
T ss_dssp TTCCEEECCCSCSHHHHHHHHHHHHHHHHHGGGEEECGGGTTSCC-
T ss_pred cCCCccccCCCcchhHHHHHHHHHHHHHHhCccceecccccCCCcc
Confidence 9999999999999999999999999999999999999999999964
No 2
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=100.00 E-value=2.8e-102 Score=781.70 Aligned_cols=432 Identities=60% Similarity=0.966 Sum_probs=415.2
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcc-cCCccHHHHHHHHHHhHhhhccC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWD-YHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~-y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
|.|++|++|+|+||+|+|||+|+|+|++|.+ ++++|||+|||.+|+.+++|+++. |.|+++.++++.||+.|+|.|+|
T Consensus 6 m~I~~i~ar~ildsrGnptvev~v~~~~g~~-ra~vPsgaStG~~Ea~elrd~d~~~y~Gkgv~kAv~~vn~~iap~Lig 84 (441)
T 3qtp_A 6 MSIQKVHAREILDSRGNPTIEVEITTGKGMF-RSCVPSGASTGVHEAVELRDGDKKRYGGKGVLKAVENVNTIIGPALLG 84 (441)
T ss_dssp TBCCEEEEEEEECTTSCEEEEEEEEETTEEE-EEECCCCCSCCSSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHTT
T ss_pred cEEEEEEEEEEECCCCCEEEEEEEEECCCcE-EEecccCCCCCcceeEeecCCCcccccCccHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999988 999999999999999999999865 99999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecC
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVING 160 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~g 160 (445)
+|+.+|++||+.|. .++|++| ++++|.||+.|||+|+|++.|+..|+|||+|||.+.|.....+|+|++++++|
T Consensus 85 ~~~~dQ~~iD~~m~-~lDgT~n-----ks~lGaNail~vSlAvakAaA~~~~~PLy~~l~~l~g~~~~~lPvP~~nvinG 158 (441)
T 3qtp_A 85 KNVLNQAELDEMMI-KLDGTNN-----KGKLGANAILGCSMSICRAAAAEKGLPLYKYLAELTGHKEMTMPVPCFNVING 158 (441)
T ss_dssp CBTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCCCCBCEEEEEEEEC
T ss_pred CChhhHHHHHHHHH-hccCCCC-----ccCCCccchhhHHHHHHHHHHHhcCCcHHHHHHhhcCCCCceeccceEeeecC
Confidence 99999999999999 8999999 79999999999999999999999999999999988887777899999999999
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcC
Q 013317 161 GSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGG 240 (445)
Q Consensus 161 g~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G 240 (445)
|.|+++++++||||++|.++.+++|+++++.++|+++|+.+|.|+|...+.+||+|||.|++++.++.|+.+.+|++++|
T Consensus 159 G~ha~n~l~~QEfmi~P~ga~sf~ealr~~~evyh~Lk~~l~~k~g~~~t~vgdEGgfap~~~~~~eaL~ll~~Ai~~aG 238 (441)
T 3qtp_A 159 GAHAGNALAMQEFMICPTGATNFHEALRMAAETYQCLKVVIKAKYGQDATNVGDEGGFAPNVSGAREALDLLVEAIAKAG 238 (441)
T ss_dssp GGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCSSHHHHHHHHHHHHHHHT
T ss_pred CccCCCccccceeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCcccCCCCCCHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999998788999999999999999999999999999999
Q ss_pred CCcceEEEEeccccccccccCcceeecccCC--CCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHH
Q 013317 241 YIGKIVIGMDVAASEFYDRKDKTYDLNFKEE--NNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGK 318 (445)
Q Consensus 241 ~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~--~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~ 318 (445)
|+++|.|++|+++++||+.++++|+++|+++ +.+.++.+|++|++++|.+++++|||.||||||+++|+++|++|+++
T Consensus 239 y~~~i~i~lD~Aasefy~~~~g~Y~l~f~~~~~~~~~~~~~t~~elid~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~ 318 (441)
T 3qtp_A 239 YTGKIEIAMDCAASEFYNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVE 318 (441)
T ss_dssp CTTTCEEEEECCGGGGEETTTTEEETTTTSCGGGCCGGGEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHH
T ss_pred CCceEEEccchhHHHhhhccCCeEEeecCCcccccccccccCHHHHHHHHHHHhhhcceeeecCCCChHHHHHHHHHHHh
Confidence 9888999999999999998778999998766 44555679999999999999999999999999999999999999999
Q ss_pred hCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhh
Q 013317 319 IGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGL 398 (445)
Q Consensus 319 ~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~ 398 (445)
++ ++||+|||++++++++++++++.++||+++||++|+||||++++++++|+++|+.+|+||+++||+|++++|||||+
T Consensus 319 lg-~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmvsHrsgETeDt~iAdLAVal 397 (441)
T 3qtp_A 319 HG-NFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMASHRSGETEDTFIADLVVGL 397 (441)
T ss_dssp TT-TSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHT
T ss_pred cC-CceEEeccccccCHHHHHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEEeCCCCCccHhHHHHHHHHh
Confidence 96 69999999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCCCCchhHHHHHHHHHHHHHhCCCccccCccCCCCC
Q 013317 399 ATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTKFRTPV 442 (445)
Q Consensus 399 ~~~~~~~G~~~~~er~~k~n~ll~i~~~l~~~~~~~~~~~~~~~ 442 (445)
++.|+|.|+|+|+||++||||||||||||++ +.|.|++||.|.
T Consensus 398 ~~gqIKtGap~rseR~aKyNqLlrIeeelg~-a~~~g~~~~~~~ 440 (441)
T 3qtp_A 398 NCKQIKTGAPCRSERLCKYNQLMRIEEELGN-IPYAGKNWRNST 440 (441)
T ss_dssp TCEEEECCCSCSHHHHHHHHHHHHHHHHHSS-CCBCTTCCBCCC
T ss_pred CCCccccCCCcchhHHHHHHHHHHHHHHhCc-CeecccccccCC
Confidence 9999999999999999999999999999999 999999999986
No 3
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=100.00 E-value=3.4e-95 Score=743.72 Aligned_cols=419 Identities=51% Similarity=0.823 Sum_probs=391.8
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcc-cCCccHHHHHHHHHHhHhhhccC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWD-YHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~-y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
|+|++|++|+|+||+|+|||+|+|+|++|++|+|++|+|+|||.+|+.+++|+++. |.|+++.++++.|++.|+|.|+|
T Consensus 26 m~I~~i~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~g~~v~~av~~v~~~iap~LiG 105 (449)
T 3uj2_A 26 LEIEKVIGREIIDSRGNPTVEAEVYLAGGVTGRGTAPSGASTGEFEALELRDGDKGRFGGKGVTKAVQNINTEISEILSG 105 (449)
T ss_dssp TBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHTT
T ss_pred eEEEEEEEEEEECCCCCCeEEEEEEECCCCEEEEeccCCCcCcceeEEEeccCCcccccchhHHHHHHHHHHHHHHHHcc
Confidence 79999999999999999999999999999999999999999999999999998874 99999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecC
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVING 160 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~g 160 (445)
+||.+|++||+.|. .++++.| ++.++.+|++||||||||+.||.+|+|||+||| |..++++|+|+|++++|
T Consensus 106 ~d~~~~e~i~~~m~-~~dgt~~-----k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLG---G~~~~~lpvp~~n~inG 176 (449)
T 3uj2_A 106 MDASDIYAVDRAMI-DADGTKD-----KSKFGANAVLAVSIACAKAAAAALGVPLYRFLG---GLNANRLPVPMMNILNG 176 (449)
T ss_dssp SBTTCHHHHHHHHH-HHHCSSS-----CTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---GGGCCBCCEECEEEEEC
T ss_pred CCccCHHHHHHHHH-HhcCcCC-----cchhhHHHHHHHHHHHHHHHHHHhCCCHHHHhC---CCCCCceeeeeEEEecC
Confidence 99999999999999 7887765 678899999999999999999999999999999 98888999999999999
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcC
Q 013317 161 GSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGG 240 (445)
Q Consensus 161 g~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G 240 (445)
|.|+++++++||+|++|.++.+++++++++.++|+++|..+|.| | ...++|++|+|.|+++++++.++.+++|+|++|
T Consensus 177 G~ha~~~~~~qEfmi~P~ga~~~~ea~~~~~egy~~lK~~lk~~-g-~~t~vGdeggfap~~~~~~e~l~~i~~AIr~ag 254 (449)
T 3uj2_A 177 GAHAANTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSK-G-LATSVGDEGGFAPDLASDEEAIEYILEAVKLAG 254 (449)
T ss_dssp STTSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-T-CCCCBCTTSCBCCCCSCHHHHHHHHHHHHHHTT
T ss_pred cccCCCccchhhhhhCCcccccHHHHHHHHHHHHHHHHHHHhhc-C-CccccCCCCCcCCCccCHHHHHHHHHHHHHHhc
Confidence 99998889999999999999999999999999999999888876 5 567899999999999888999999999999999
Q ss_pred CC-c-ceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHH
Q 013317 241 YI-G-KIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGK 318 (445)
Q Consensus 241 ~~-~-~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~ 318 (445)
|+ + ++.|++|+|+++||++++++|++. +.++.||++|+++++.+++++|+|.||||||+++|+++|++|+++
T Consensus 255 y~~G~dv~l~vD~aase~~~~~~g~Y~l~------~~~~~~t~~eai~~~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~ 328 (449)
T 3uj2_A 255 YEPGRDFVLAMDAASSEWKGEKKGEYILP------KCKRKFASEELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRE 328 (449)
T ss_dssp CCBTTTBEEEEECCGGGCBCSSTTEEECT------TTCCEEEHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHH
T ss_pred cccCCceEEEEEcchhhhccccCceeecc------CcccccCHHHHHHHHHHHHHhcCceEEECCCCcchHHHHHHHHHH
Confidence 86 4 799999999999998777899874 124579999999998888899999999999999999999999999
Q ss_pred hCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhh
Q 013317 319 IGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGL 398 (445)
Q Consensus 319 ~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~ 398 (445)
++.++||+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|++|+++||++++++|||||+
T Consensus 329 ~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v~H~sgET~d~~iadLaVa~ 408 (449)
T 3uj2_A 329 LGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVVSHRSGETEDTTIADLAVAL 408 (449)
T ss_dssp HTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHT
T ss_pred hCCCceEECCcceeCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHh
Confidence 95559999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCCCCchhHHHHHHHHHHHHHhCCCccccCcc
Q 013317 399 ATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTK 437 (445)
Q Consensus 399 ~~~~~~~G~~~~~er~~k~n~ll~i~~~l~~~~~~~~~~ 437 (445)
++.|+|.|+|+|+||++||||||||||+|++.+.|.|+.
T Consensus 409 ~~~~ik~G~~~r~er~akyn~llriee~l~~~~~~~~~~ 447 (449)
T 3uj2_A 409 NTGQIKTGAPSRSERVAKYNQLLRIEEELGDSAVYPGFT 447 (449)
T ss_dssp TCCEEECCCSCSHHHHHHHHHHHHHHHHHGGGCBCCGGG
T ss_pred CCCcccCCCCchhhHHHHHHHHHHHHHHhccccEeCCcc
Confidence 999999999999999999999999999999999998863
No 4
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=7.9e-95 Score=737.70 Aligned_cols=415 Identities=49% Similarity=0.811 Sum_probs=385.4
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcc-cCCccHHHHHHHHHHhHhhhccC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWD-YHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~-y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
++|++|++|+|+||+|+|||+|+|+|++|++|+|++|+|+|||.+|+.+++|+++. |.|+++.++++.|++.|+|.|+|
T Consensus 3 ~~i~~~~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~gkgv~~av~~v~~~iap~LiG 82 (428)
T 3tqp_A 3 ATITDINAHEILDSRANPTLEVRVTLSSQAYGCAAVPSGASTGEREAVELRDNDLERYGGKGVLQAVENVNGPIRDALLG 82 (428)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBCC---CCSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHTT
T ss_pred ceEEEEEEEEEEcCCCCCEEEEEEEECCCCEEEEeccccccCCcceeEeecCCCccccccccHHHHHHHHHHHHHHHhcC
Confidence 48999999999999999999999999999999999999999999999999998864 99999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhC-CCcceeeeeeEEeec
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAG-NKTLVLPVPAFNVIN 159 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G-~~~~~ip~p~~~~~~ 159 (445)
+||.+|++||+.|. .++++.| ++.++.||++||||||||+.||.+|+|||+||| | ..+.++|+|+|++++
T Consensus 83 ~d~~~~~~i~~~m~-~~dgt~~-----k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLG---G~~~~~~~pvp~~~~in 153 (428)
T 3tqp_A 83 QDPRSQEEIDRIMI-ELDGTEN-----KANLGANAILGVSLAVAYAAANNADLPLYRYLG---GDGGPFSMPVPMMNIIN 153 (428)
T ss_dssp CCTTCHHHHHHHHH-HHHCCTT-----CTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH---TTTCCCCBCEEEEEEEE
T ss_pred CCccCHHHHHHHHH-HhcCcCC-----cCccchhHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCceeeeEEEEEec
Confidence 99999999999999 7888766 678889999999999999999999999999999 9 655679999999999
Q ss_pred CCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhc
Q 013317 160 GGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKG 239 (445)
Q Consensus 160 gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~ 239 (445)
||.|+++++++||+|++|.++.+++++++++.++|+++|.+++.| |. .+++|++|+|.|+++++++.++.+.+|+|++
T Consensus 154 GG~ha~~~~~~qefmi~P~ga~~~~ea~~~~~egy~~lK~~l~~~-g~-~t~vGdegg~ap~~~~~~e~l~~i~~Air~a 231 (428)
T 3tqp_A 154 GGAHATNNLDFQEFMIVPVGAPTFAEALRYGAEVFHALKKRLVSR-GL-MSAVGDEGGFAPDLPNNEAAFELILEAIEDA 231 (428)
T ss_dssp CC----CCCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHT
T ss_pred CcccCCCccchhHHhhcCcchhhHHHHHHHHHHHHHhHhhhhccc-cc-ccccCCCCCcCCCcccHHHHHHHHHHHHHHh
Confidence 999998889999999999999999999999999999999988876 53 6789999999999888899999988999999
Q ss_pred CCC--cceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHH
Q 013317 240 GYI--GKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTG 317 (445)
Q Consensus 240 G~~--~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~ 317 (445)
||+ +++.|++|+|+++||++ ++|+++ |+.||++++++++.+++++|+|.||||||+++|+++|++|++
T Consensus 232 gy~~G~dv~l~vD~aase~~~~--g~Y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~eg~~~L~~ 301 (428)
T 3tqp_A 232 NYVPGKDIYLALDAASSELYQN--GRYDFE--------NNQLTSEEMIDRLTEWTKKYPVISIEDGLSENDWAGWKLLTE 301 (428)
T ss_dssp TCCBTTTBEEEEECCGGGSEET--TEECCS--------SSCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHH
T ss_pred hcccCCceEEEEecchhhhccC--Cceecc--------ccccCHHHHHHHHHHHHhhcccceEeCCCCcccHHHHHHHHH
Confidence 886 38999999999999975 589874 789999999999888789999999999999999999999999
Q ss_pred HhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhh
Q 013317 318 KIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVG 397 (445)
Q Consensus 318 ~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a 397 (445)
+++.++||+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|+||+++||++++++|||||
T Consensus 302 ~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v~H~sGEted~~iadLaVa 381 (428)
T 3tqp_A 302 RLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIISHRSGETEDTTIADLAVA 381 (428)
T ss_dssp HHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHH
T ss_pred hcCCCcceeccccccCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHH
Confidence 99877999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccccCCCCCchhHHHHHHHHHHHHHhCCCccccCcc
Q 013317 398 LATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTK 437 (445)
Q Consensus 398 ~~~~~~~~G~~~~~er~~k~n~ll~i~~~l~~~~~~~~~~ 437 (445)
+++.|+|.|+|+|+||++||||||||||+|++.+.|.|++
T Consensus 382 ~~~~~ik~G~p~r~er~akyn~llriee~l~~~~~~~~~~ 421 (428)
T 3tqp_A 382 TDARQIKTGSLCRSDRVAKYNRLLQIERELNDQAPYAGKE 421 (428)
T ss_dssp TTCEEEECCCSSSHHHHHHHHHHHHHHHHHTTSSCBCGGG
T ss_pred cCCCcccCCCCcchhHHHHHhHHHHHHHHhCcccEecCcc
Confidence 9999999999999999999999999999999999999863
No 5
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=100.00 E-value=5.9e-95 Score=736.36 Aligned_cols=408 Identities=48% Similarity=0.773 Sum_probs=387.4
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccC
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
|++|++|++|+|+||+|+|||+|+|+|++|.+|++++|+|+|||.+|+.+++|+++.|.|+++.+++..|++.|+|.|+|
T Consensus 4 ~~~i~~i~~r~i~dsrG~ptvev~v~t~~g~~g~a~vpsgastg~~ea~elrd~~~~y~gkgv~~av~~v~~~iap~LiG 83 (417)
T 3qn3_A 4 MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTGSKEALELRDNDERFGGKGVLKAVANVNETIADEILG 83 (417)
T ss_dssp CSBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCBSSCSSSCBCCCCCSTGGGGTCCHHHHHHHHTHHHHHHTT
T ss_pred CceeeEEEEEEEEcCCCCceEEEEEEECCCCEEEEecCCCCccccceeeeecCCCccccCccHHHHHHHHHHHHHHHHCC
Confidence 67899999999999999999999999999999999999999999999999999997799999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecC
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVING 160 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~g 160 (445)
+||.+|++||+.|. .++++.| +++++.+|++||||||||+.||.+|+|||+||| |..++++|+|++++++|
T Consensus 84 ~d~~~~~~id~~m~-~~dgt~~-----k~~lg~nAi~aVs~Al~da~ak~~g~PLy~lLG---G~~~~~lPv~~~nvinG 154 (417)
T 3qn3_A 84 LDAFNQTQLDDTLR-ELDGTNN-----YSNLGANATLGVSMATARAAAAALGMPLYRYLG---GANASILPVPMCNIING 154 (417)
T ss_dssp SBTTCHHHHHHHHH-HHHCSSS-----CTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH---GGGCCEECEEEEEEEEC
T ss_pred CCccCHHHHHHHHH-HhhccCC-----CCchhhhhHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCcceeeeeeeeecC
Confidence 99999999999999 7887766 688999999999999999999999999999999 98788999999999999
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcC
Q 013317 161 GSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGG 240 (445)
Q Consensus 161 g~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G 240 (445)
|.|+++++++||+|++|.++.+++++++++.++|+++|..++.| |. ..++|++|+|.|++++.++.++.+++|+|++|
T Consensus 155 G~ha~~~~~~qe~mi~P~ga~~~~ea~~~G~evy~~lK~~l~~k-g~-~t~vGdegg~ap~~~~~~e~l~~i~~Air~aG 232 (417)
T 3qn3_A 155 GAHANNNVDFQEFMIMPFGFTSFKEALRSVCEIYAILKKELANS-GH-STALGDEGGFAPNLANNTEPIDLLMTCIKKAG 232 (417)
T ss_dssp GGGSSSSCCCSEEEEEECSCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSSSHHHHHHHHHHHHTT
T ss_pred cccCCCcccHHHHhcCccchHHHHHHHHHhHHHHHHHHHHHHhc-Cc-ccccCCCCCcCCCcCCHHHHHHHHHHHHHHcC
Confidence 99998889999999999999999999999999999999988877 54 67899999999998888899999999999999
Q ss_pred CCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhC
Q 013317 241 YIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIG 320 (445)
Q Consensus 241 ~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~ 320 (445)
|++++.|++|+|+++||++ ++|+++ ++.||++++++++.+++++|+|.||||||+++|+++|++|+++++
T Consensus 233 y~~dv~l~vD~~ase~~~~--g~y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g 302 (417)
T 3qn3_A 233 YENRVKIALDVASTEFFKD--GKYHME--------GKAFSSEALIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLG 302 (417)
T ss_dssp CTTTEEEEEECCGGGGEET--TEEEET--------TEEECHHHHHHHHHHHHHHSCEEEEESSSCTTCHHHHHHHHHHHT
T ss_pred CCCCceEEEECCchhhccC--CeeecC--------CCccCHHHHHHHHHHHHhhcceeEEecCCCcccHHHHHHHHHhhC
Confidence 8779999999999999975 689974 467999999999888889999999999999999999999999995
Q ss_pred CceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcC
Q 013317 321 RHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLAT 400 (445)
Q Consensus 321 ~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~ 400 (445)
.++||+|||++++++++++++++.+++|+++||++|+||||++++++++|+++|+.+|+||+++||+|++++|||||+++
T Consensus 303 ~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~sgEt~d~~iadlava~~~ 382 (417)
T 3qn3_A 303 NKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNT 382 (417)
T ss_dssp TTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTC
T ss_pred CCCceecCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHhCC
Confidence 56999999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCchhHHHHHHHHHHHHHhCC
Q 013317 401 GQIKTGAPCRSERLAKYNQLLRIEEELGP 429 (445)
Q Consensus 401 ~~~~~G~~~~~er~~k~n~ll~i~~~l~~ 429 (445)
+|+|+|+|+|+||++||||||||||||++
T Consensus 383 ~~ik~G~~~r~er~akyn~llriee~l~~ 411 (417)
T 3qn3_A 383 GQIKTGALARGERTAKYNRLLEIEFESDE 411 (417)
T ss_dssp SEEECCCSCSHHHHHHHHHHHHHTTTCCE
T ss_pred CccccCCCcchhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999964
No 6
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=100.00 E-value=1.7e-92 Score=724.29 Aligned_cols=429 Identities=59% Similarity=0.932 Sum_probs=403.5
Q ss_pred ceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcc-cCCccHHHHHHHHHHhHhhhcc--
Q 013317 3 TINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWD-YHGRGVLKAVQNVNSIIGPALV-- 79 (445)
Q Consensus 3 ~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~-y~~~~~~~a~~~i~~~l~p~Li-- 79 (445)
.|++|++|+|+||+|+|+|+|+|+|++| +|+|++|+++|||.+|+.+++|+++. |.|+++.++++.|++.|+|.|+
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G-~G~g~~psgastG~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li~~ 79 (436)
T 2al1_A 1 AVSKVYARSVYDSRGNPTVEVELTTEKG-VFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKA 79 (436)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHH
T ss_pred CeeEEEEEEEEcCCCCcEEEEEEEECCc-eEEEeecccccCCcceeeeeccCccccccCccHHHHHHHHHHHHHHHHHHC
Confidence 4999999999999999999999999999 99999999999999999999998765 9999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCC--cceeeeeeEEe
Q 013317 80 GKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNK--TLVLPVPAFNV 157 (445)
Q Consensus 80 G~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~--~~~ip~p~~~~ 157 (445)
|+||.+|+.||+.|. .++++.+ +++++.+|++||||||||+.||.+|+|||+|||++.|.. ++++|+|+|++
T Consensus 80 G~d~~~~~~i~~~m~-~~dgt~~-----~~~lg~~Ai~aVd~Al~Da~ak~~g~PLy~lLG~l~G~~~~~~~lpvp~~n~ 153 (436)
T 2al1_A 80 NIDVKDQKAVDDFLI-SLDGTAN-----KSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNV 153 (436)
T ss_dssp TCCTTCHHHHHHHHH-HHHCSTT-----STTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTCCCTTEEECEEEEEE
T ss_pred CCChhhHHHHHHHHH-HhcCCcc-----cchhHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCcCceeeEEEEEe
Confidence 999999999999998 7777765 577889999999999999999999999999999888876 67899999999
Q ss_pred ecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHH
Q 013317 158 INGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIA 237 (445)
Q Consensus 158 ~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~ 237 (445)
++||.|+++++++||+|++|.++.+++++++++.++|+++|..+|.|+|...+++|++|+|.|+.+++++.++.++++++
T Consensus 154 inGg~ha~~~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~l~~k~G~~a~~vGdegg~~p~~~~~~~~l~~i~~ai~ 233 (436)
T 2al1_A 154 LNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK 233 (436)
T ss_dssp EECGGGSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHHHHHHHHHHHHH
T ss_pred ecCccccCCccccccceecCcccccHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988886657899999999988888999999999999
Q ss_pred hcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHH
Q 013317 238 KGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTG 317 (445)
Q Consensus 238 ~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~ 317 (445)
++|+++++.|++|+++++||+ +++|+++|.+++.+.|+.||++|+++++.+++++|+|.||||||+++|+++|++|++
T Consensus 234 ~~G~~g~v~l~vD~aase~~~--n~~y~~~~~~~~~~~~~~~t~~eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~ 311 (436)
T 2al1_A 234 AAGHDGKVKIGLDCASSEFFK--DGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFK 311 (436)
T ss_dssp HHTCTTTCEEEEECCGGGGEE--TTEECTTTTCTTCCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHT
T ss_pred HcCCCcceEEEEechhhhhcc--CCceEEecccccccccccCCHHHHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHh
Confidence 899754699999999999996 468988776655567899999999999899999999999999999999999999999
Q ss_pred HhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhh
Q 013317 318 KIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVG 397 (445)
Q Consensus 318 ~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a 397 (445)
+++ +||+|||++++|+++++++++.+++|+++||++|+||||++++++++|+++|+.+|++|+++||++++++|||++
T Consensus 312 ~~~--ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~qiGGitea~~ia~lA~~~g~~~~~sh~sgEt~~~~iA~lava 389 (436)
T 2al1_A 312 TAG--IQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389 (436)
T ss_dssp TCC--SEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHH
T ss_pred cCC--CeEEECCcccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEEecCCCchHHHHHHHHHHH
Confidence 977 999999997789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccccCCCCCchhHHHHHHHHHHHHHhCCCccccCccCCCCC
Q 013317 398 LATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTKFRTPV 442 (445)
Q Consensus 398 ~~~~~~~~G~~~~~er~~k~n~ll~i~~~l~~~~~~~~~~~~~~~ 442 (445)
+.++|+|.|+|+|+||++||||||||||+|++.+.|.|++|+.|.
T Consensus 390 ~~~~~ik~G~~~r~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~~ 434 (436)
T 2al1_A 390 LRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGENFHHGD 434 (436)
T ss_dssp TTCSEEECCCSCSHHHHHHHHHHHHHHHHHGGGEEECGGGCTTGG
T ss_pred hcCCcCcCCCCccchHHHHHHHHHHHHHHhccccEeCccccCCCC
Confidence 999999999999999999999999999999999999999998874
No 7
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=100.00 E-value=7.6e-92 Score=719.97 Aligned_cols=428 Identities=69% Similarity=1.097 Sum_probs=401.6
Q ss_pred ceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCc-ccCCccHHHHHHHHHHhHhhhcc--
Q 013317 3 TINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGW-DYHGRGVLKAVQNVNSIIGPALV-- 79 (445)
Q Consensus 3 ~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~-~y~~~~~~~a~~~i~~~l~p~Li-- 79 (445)
+|++|++|+|+||+|+|+|+|+|+|++|+ |+|++|+++|||.+|+.+++|+++ .|.++++.+++..|++.|+|.|+
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G~-G~~~~psgastG~~Ea~el~d~~~~~~~g~~v~~av~~v~~~iap~Li~~ 79 (439)
T 2akz_A 1 SIEKIWAREILDSRGNPTVEVDLYTAKGL-FRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISS 79 (439)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEE-EEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHH
T ss_pred CeeEEEEEEEEcCCCCceEEEEEEECCCc-eEeeccCCCceeEEEEeeccCCCccccCCCcHHHHHHHHHHHHHHHHHhC
Confidence 49999999999999999999999999999 999999999999999999998765 49999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeec
Q 013317 80 GKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVIN 159 (445)
Q Consensus 80 G~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~ 159 (445)
|+||.+|+.||+.|. .++++.| +++++.+|++||||||||+.||.+|+|||+|||.++|..++++|+|+|++++
T Consensus 80 G~d~~~~~~i~~~m~-~~dgt~~-----~~~lg~nAi~aVs~Al~Da~ak~~g~PLy~lLG~~~G~~~~~lpvp~~~~in 153 (439)
T 2akz_A 80 GLSVVEQEKLDNLML-ELDGTEN-----KSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGNSDLILPVPAFNVIN 153 (439)
T ss_dssp CCCTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSCCBCEEEEEEEE
T ss_pred CCChhhHHHHHHHHH-HhcCCcc-----cchHHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCceeEEEEEEEec
Confidence 999999999999998 7787765 5778899999999999999999999999999998889777789999999999
Q ss_pred CCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhc
Q 013317 160 GGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKG 239 (445)
Q Consensus 160 gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~ 239 (445)
||.|+++++++||+|++|.++.+++++++++.++|+++|..+|.|+|...+++|++|+|.|+.+++++.++.++++++++
T Consensus 154 Gg~ha~~~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~lk~k~G~~~~~vGdegg~~p~~~~~~e~l~~i~~ai~~~ 233 (439)
T 2akz_A 154 GGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKA 233 (439)
T ss_dssp CGGGSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCSCCCHHHHHHHHHHHHHHH
T ss_pred CccccccccccccceecCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCcccHHHHHHHHHHHHHHc
Confidence 99999889999999999999999999999999999999999999988766789999999998888899999999999989
Q ss_pred CCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHh
Q 013317 240 GYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKI 319 (445)
Q Consensus 240 G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~ 319 (445)
|+++++.|++|++++++|++ ++|++++.++ .+.|+.||++|+++++.+++++|+|.||||||+++|+++|++|++++
T Consensus 234 G~~g~v~l~vD~a~se~~~~--g~y~l~~~~~-~~~~~~~t~~e~~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~ 310 (439)
T 2akz_A 234 GYTEKIVIGMDVAASEFYRD--GKYDLDFKSP-TDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANV 310 (439)
T ss_dssp TCTTTCEEEEECCGGGGEET--TEECTTTTSS-CCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTC
T ss_pred CCccceEEEEechHhhhccC--CeeEEecccc-ccccccCCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCC
Confidence 97557999999999999964 5898765443 35578999999999999999999999999999999999999999997
Q ss_pred CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhc
Q 013317 320 GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLA 399 (445)
Q Consensus 320 ~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~ 399 (445)
+ +||+|||++++++++++++++.+++|+++||++|+||||++++++++|+++|+.+|+||+++||++++++|||+|++
T Consensus 311 ~--ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~sh~~gEt~~~~iA~lava~~ 388 (439)
T 2akz_A 311 G--IQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLC 388 (439)
T ss_dssp S--SEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHT
T ss_pred C--CEEEeCCCccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHCCCeEEeecCCCccHHHHHHHHHHHhc
Confidence 7 99999998778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCchhHHHHHHHHHHHHHhCCCccccCccCCCCC
Q 013317 400 TGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTKFRTPV 442 (445)
Q Consensus 400 ~~~~~~G~~~~~er~~k~n~ll~i~~~l~~~~~~~~~~~~~~~ 442 (445)
++|+|+|+|+|+||++||||||||||+|++++.|.|++||.|-
T Consensus 389 ~~~ik~G~~~r~er~~kyn~llriee~l~~~~~~~~~~~~~~~ 431 (439)
T 2akz_A 389 TGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNPS 431 (439)
T ss_dssp CSEEECCCSCSHHHHHHHHHHHHHHHHHGGGCCBCGGGTTCGG
T ss_pred CCcccCCCCccchhHHHHHHHHHHHHHhccCcEecCccCCCcc
Confidence 9999999999999999999999999999999999999999884
No 8
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=100.00 E-value=1.8e-87 Score=688.57 Aligned_cols=427 Identities=58% Similarity=0.921 Sum_probs=393.6
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCc-ccCCccHHHHHHHHHHhHhhhcc
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGW-DYHGRGVLKAVQNVNSIIGPALV 79 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~-~y~~~~~~~a~~~i~~~l~p~Li 79 (445)
||+|++|++++|++++++|+|+|+|+|++| +|||++|++++||.+|+.+++|+++ .|.++++.+++..|++.|+|.|+
T Consensus 3 ~m~I~~i~~~~v~~~~~~p~v~V~v~td~G-~G~ge~~sgastg~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li 81 (432)
T 2ptz_A 3 HMTIQKVHGREVLDSRGNPTVEVEVTTEKG-VFRSAVPSGASTGVYEACELRDGDKKRYVGKGCLQAVKNVNEVIGPALI 81 (432)
T ss_dssp TTSCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTTGGGTCCHHHHHHHHHTHHHHHT
T ss_pred CCEEEEEEEEEEecCCCCcEEEEEEEeCCc-EEEEEEecccccCcceeeeeccCcccccccccHHHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999999 9999999999999999999999875 49999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeec
Q 013317 80 GKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVIN 159 (445)
Q Consensus 80 G~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~ 159 (445)
|+||.+++.||+.|. .++++.+ ++.++.+|++||||||||+.||.+|+|||+|||.++|..+..+|+|+|++++
T Consensus 82 G~d~~~~~~i~~~m~-~~~~~~~-----~~~~~~~Ai~aVd~AlwD~~ak~~g~Ply~lLG~~~G~~~~~~pvp~~~~i~ 155 (432)
T 2ptz_A 82 GRDELKQEELDTLML-RLDGTPN-----KGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGTKELRLPVPCFNVIN 155 (432)
T ss_dssp TCCTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCSCCEECEEEEEEEE
T ss_pred CCChhhHHHHHHHHH-HhhCCCC-----cchHHHHHHHHHHHHHHHHHHHHhCCcHHHHhccccCCCCcCCceeEEEEec
Confidence 999999999999998 7777655 5678889999999999999999999999999998888766679999999999
Q ss_pred CCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhc
Q 013317 160 GGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKG 239 (445)
Q Consensus 160 gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~ 239 (445)
||.|+.++++++|+|++|.++.++++++++..++|+++|..++.|+|...+.+|++|+|.|+.++.++.++.+.+++|++
T Consensus 156 gg~~a~~~~~~qe~mi~p~~~~~~~ea~~~~~eg~~~lK~~l~~k~G~~at~vgdegg~~p~~~~~~~~l~~i~~Air~~ 235 (432)
T 2ptz_A 156 GGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEA 235 (432)
T ss_dssp CSTTSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGCCBCTTSSBCCSCCCTTTHHHHHHHHHHHT
T ss_pred CcccccCCCCHHHhcccCcccCCHHHHHHHHHHHHHHHHHHhHhhcCCCccccCCccCcCCCcccHHHHHHHHHHHHHHh
Confidence 99988778889999999999999999999999999999988888888655789999999998877788899877999988
Q ss_pred CCCcceEEEEeccccccccccCcceeecccCCCCCC-CCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHH
Q 013317 240 GYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDG-SQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGK 318 (445)
Q Consensus 240 G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~-n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~ 318 (445)
|+++++.|++|+|++.||+..+++|++.+. +. ++.|++.++++++.+++++|+|.||||||+++|+++|++|+++
T Consensus 236 G~~g~v~l~vDan~~~~~~~~~~~y~~~~~----~~~~~~~~a~~~~~~~~~~l~~y~i~~iEdPl~~~D~~g~~~l~~~ 311 (432)
T 2ptz_A 236 GHRGKFAICMDCAASETYDEKKQQYNLTFK----SPEPTWVTAEQLRETYCKWAHDYPIVSIEDPYDQDDFAGFAGITEA 311 (432)
T ss_dssp TCTTSCEEEEECCGGGGEETTTTEEETTTT----SSSCCEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHH
T ss_pred CCcCCcEEEEECcccccccccCceeEeecc----ccccCCCCHHHHHHHHHHHHHhCCceEEECCCCcchHHHHHHHHHh
Confidence 864479999999999999765578987321 01 4668999999999889999999999999999999999999999
Q ss_pred hCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhh
Q 013317 319 IGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGL 398 (445)
Q Consensus 319 ~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~ 398 (445)
++.++||+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|++|+++||++++++|||+|+
T Consensus 312 ~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~lA~~~g~~v~~~h~~get~~~~~a~lava~ 391 (432)
T 2ptz_A 312 LKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWSVMVSHRSGETEDTYIADLVVAL 391 (432)
T ss_dssp TTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHH
T ss_pred cCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecCCCCccHHHHHHHHHHHh
Confidence 94449999999877899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCCCCchhHHHHHHHHHHHHHhCCCccccCccC
Q 013317 399 ATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTKF 438 (445)
Q Consensus 399 ~~~~~~~G~~~~~er~~k~n~ll~i~~~l~~~~~~~~~~~ 438 (445)
+++|+|+|+|+|+||++||||||||||+|++.+.|.|++|
T Consensus 392 ~~~~ik~G~~~r~er~~kyn~llrie~~l~~~~~~~~~~~ 431 (432)
T 2ptz_A 392 GSGQIKTGAPCRGERTAKLNQLLRIEEELGAHAKFGFPGW 431 (432)
T ss_dssp TCSEEECCSSCSHHHHHHHHHHHHHHHHHCTTCEESCGGG
T ss_pred CCCCCCCCCCccchhHHHHHHHHHHHHHhccCcCccCCCC
Confidence 9999999999999999999999999999999999999887
No 9
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=100.00 E-value=2.9e-82 Score=651.48 Aligned_cols=421 Identities=52% Similarity=0.812 Sum_probs=385.4
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCc-ccCCccHHHHHHHHHHhHhhhccC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGW-DYHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~-~y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
|+|++|++++|+||+|+++|+|+|+|++|++|.+++|++.++|.+|+.+++|+++ .|.|+++.+++..|++.|+|.|+|
T Consensus 1 ~~I~~v~~~~v~~srg~~~v~V~v~td~G~~Gge~~p~~~~~G~~ea~e~rd~~~~~y~g~~~~~~~~~i~~~l~p~LiG 80 (431)
T 2fym_A 1 SKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIG 80 (431)
T ss_dssp CBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCCCSSCSSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHTT
T ss_pred CeeEEEEEEEEEcCCCCeeEEEEEEECCCCccceecCcccccCcccceeccCCcccccccccHHHHHHHHHHHHHHHHcC
Confidence 6999999999999999999999999999999944789999999999999999775 489999999999999889999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce----eeeeeEE
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV----LPVPAFN 156 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~----ip~p~~~ 156 (445)
+||.++++||+.|. .++++++ ++.++.+|++||||||||+.||.+|+|||+||| |..++. +|+|+|+
T Consensus 81 ~d~~~~~~i~~~l~-~~~g~~~-----~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLG---G~~~~~~~~~~pv~~~~ 151 (431)
T 2fym_A 81 KDAKDQAGIDKIMI-DLDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIA---ELNGTPGKYSMPVPMMN 151 (431)
T ss_dssp SBTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHH---HHTTCTTCCCCCEECEE
T ss_pred CCHHHHHHHHHHHH-HhhCCCc-----ccchhHHHHHHHHHHHHHHHHHHhCCcHHHHhc---CcccccccccccceeEe
Confidence 99999999999998 6777655 467788999999999999999999999999999 865555 9999999
Q ss_pred eecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHH
Q 013317 157 VINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAI 236 (445)
Q Consensus 157 ~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai 236 (445)
+++||.|+++.++++++|++|.++.+++++++...++|+++|..++.+ |. ..++|++|+|.++++++.+.+++||+++
T Consensus 152 ~~~gg~~~~~~l~~~~~mi~p~~~~~~~~a~~~~~~g~~~lK~~l~~~-g~-~~kvG~~gg~~~~~~~d~~~l~~vreai 229 (431)
T 2fym_A 152 IINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAK-GM-NTAVGDEGGYAPNLGSNAEALAVIAEAV 229 (431)
T ss_dssp EEECGGGSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHH
T ss_pred eccCccccccccCcchhcccCccchhHHHHHHHHHHHHHHHHHHHHhc-Cc-ccccCcccCCCCCccchHHHHHHHHHHH
Confidence 999999988788899999999888999999999999999999888866 53 3678899999999888899999999999
Q ss_pred HhcCCC-c-ceEEEEeccccccccccCcceeecccCCCCCCC-CCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHH
Q 013317 237 AKGGYI-G-KIVIGMDVAASEFYDRKDKTYDLNFKEENNDGS-QKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYA 313 (445)
Q Consensus 237 ~~~G~~-~-~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n-~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~ 313 (445)
+++|++ + ++.|++|+++++||+ +++|++.+ .| +.||.+++++++.++.++|++.||||||+++|+++|+
T Consensus 230 ~~~g~~~G~dv~l~vDaaas~~~~--~~~Y~~~~------~n~~~~t~~~ai~~~~~L~~~~~i~~iEePl~~~d~~~~~ 301 (431)
T 2fym_A 230 KAAGYELGKDITLAMDCAASEFYK--DGKYVLAG------EGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFA 301 (431)
T ss_dssp HHTTCCBTTTBEEEEECCGGGGEE--TTEEEEGG------GTTEEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHH
T ss_pred HHhccCCCCccEEEEeechhhccc--cCceeecc------CCCCCCCHHHHHHHHHHHHHhCCceEEECCCCcccHHHHH
Confidence 999997 3 799999999999997 46898853 26 8899999999987754459999999999999999999
Q ss_pred HHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHH
Q 013317 314 ELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIAD 393 (445)
Q Consensus 314 ~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~ 393 (445)
+|+++++.++||++||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|++|+++||.+++++|
T Consensus 302 ~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~g~~~~~~h~~get~~~~~a~ 381 (431)
T 2fym_A 302 YQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIAD 381 (431)
T ss_dssp HHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHH
T ss_pred HHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHCCCeEEEeCCCCCchHHHHHH
Confidence 99999943499999994478899999999999999999999999999999999999999999999999988999999999
Q ss_pred HHhhhcCCccccCCCCCchhHHHHHHHHHHHHHhCCCccccC-ccCCCC
Q 013317 394 LSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAG-TKFRTP 441 (445)
Q Consensus 394 la~a~~~~~~~~G~~~~~er~~k~n~ll~i~~~l~~~~~~~~-~~~~~~ 441 (445)
||+++.++++++|+|+++||++|||||||||++|+++..|.| ++|+.|
T Consensus 382 la~a~~~~~i~~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~~ 430 (431)
T 2fym_A 382 LAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQ 430 (431)
T ss_dssp HHHHTTCEEEECCCSCSHHHHHHHHHHHHHHHHHGGGSCCCGGGGSTTC
T ss_pred HHHhcCCCccccCCCccchHHHHHHHHHHHHHHhccCceecChhhccCC
Confidence 999999999999999999999999999999999999999999 789887
No 10
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=8.5e-82 Score=647.88 Aligned_cols=418 Identities=56% Similarity=0.896 Sum_probs=387.7
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGK 81 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 81 (445)
|||++|+++.+.+++++++|+|+|+|++|++|+|++|++.+||.+|+.+++|+++.|.++++.+++..|++.|+|.|+|+
T Consensus 9 MkI~~i~~~~v~~s~g~~~v~V~v~td~G~~G~G~~~~~~~tg~~ea~~~~d~~~~~~g~~~~~~~~~i~~~l~p~LiG~ 88 (427)
T 2pa6_A 9 FEIKDIVAREVIDSRGNPTVEVEVITKGNGYGSAIVPSGASTGTHEALELRDKEKRFGGKGVLMAVENVNSIIRPEILGY 88 (427)
T ss_dssp GBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCCSSCSSSCCCCCCCSSGGGGTCCHHHHHHHHHTHHHHHTTC
T ss_pred CEEEEEEEEEEEcCCCCceEEEEEEECCCCeeeEecccccccCcceeEeecCCccccccccHHHHHHHHHHHHHHHHcCC
Confidence 79999999999999999999999999999999999999999999999999999888999999999999998999999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCC
Q 013317 82 DPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGG 161 (445)
Q Consensus 82 d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg 161 (445)
||.+++++|+.|. .++++.+ ++.++.+|++||||||||+.||.+|+|||+||| |..++++|+|++++++||
T Consensus 89 d~~~~~~i~~~l~-~~~~~~~-----~~~~~~~A~~avd~AlwDl~ak~~g~Pl~~lLG---g~~~~~vp~~~~~~~~gg 159 (427)
T 2pa6_A 89 DARMQREIDTIMI-ELDGTPN-----KSRLGANAILAVSLAVAKAAAATAKIPLYKYLG---GFNSYVMPVPMMNVINGG 159 (427)
T ss_dssp BTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---CSCCCEECEECEEEEECS
T ss_pred CHHHHHHHHHHHH-HhhCCCc-----cccchHHHHHHHHHHHHHHHHHHhCCcHHHHhc---Cccccccccchhcccccc
Confidence 9999999999998 6665543 355677999999999999999999999999999 977778999999888999
Q ss_pred ccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCC
Q 013317 162 SHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGY 241 (445)
Q Consensus 162 ~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~ 241 (445)
.|+++.++++++|+.|.++.+++++.+...++|+++|..+|.|+|....++|++|++.++.+.+.+++++||++++++|+
T Consensus 160 ~~~~~~l~~~~~~~~p~~~~~~~~a~~~~~~g~~~lK~~l~~K~G~~~~~vg~~gg~~~~~~~d~~~v~~vreav~~~G~ 239 (427)
T 2pa6_A 160 KHAGNDLDLQEFMIMPVGATSISEAVRMGSEVYHVLKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKKAGY 239 (427)
T ss_dssp TTTSSSCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCTTSCCBCTTSCBCCSCCSHHHHHHHHHHHHHHHTC
T ss_pred ccccCCcCHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCcCCcCCCccchHHHHHHHHHHHHHhCC
Confidence 88777889999999998889999999999999999998888888876678899999988888889999999999988885
Q ss_pred CcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCC
Q 013317 242 IGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGR 321 (445)
Q Consensus 242 ~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~ 321 (445)
++++.|+||+|+++||+ |++|++. |+.||++++++++.+++++|++.|||||++++|+++|++|+++++
T Consensus 240 ~~~~~L~vDa~as~~~~--n~~~~~~--------n~~~~~~~ai~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~- 308 (427)
T 2pa6_A 240 EDEVVFALDAAASEFYK--DGYYYVE--------GKKLTREELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKELD- 308 (427)
T ss_dssp TTTCEEEEECCGGGGEE--TTEEEET--------TEEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHSS-
T ss_pred CCCcEEEEEcchhcccc--CCceeec--------CCCCCHHHHHHHHHHHHhhCCCcEEEcCCChhhHHHHHHHHhhCC-
Confidence 33799999999999996 5789874 789999999998877889999999999999999999999999987
Q ss_pred ceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCC
Q 013317 322 HVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATG 401 (445)
Q Consensus 322 ~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~ 401 (445)
+||++||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++++||+++||.+++++|||++..++
T Consensus 309 -ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~~~~~h~~~es~i~~aa~l~~a~~~~ 387 (427)
T 2pa6_A 309 -IQIVGDDLFVTNVERLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVVSHRSGETEDTTIADLSVALNSG 387 (427)
T ss_dssp -SEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEEECCSSCCSCCHHHHHHHHTTCS
T ss_pred -CeEEeCccccCCHHHHHHHHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCChHHHHHHHHHHhCCC
Confidence 9999999877889999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHHhCCCccccCccCCCC
Q 013317 402 QIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTKFRTP 441 (445)
Q Consensus 402 ~~~~G~~~~~er~~k~n~ll~i~~~l~~~~~~~~~~~~~~ 441 (445)
++++|+|+++||++|||||||||++|++ +.|.|++|+-|
T Consensus 388 ~~~~G~~~~~er~~kyn~llri~~~~~~-~~~~~~~~~~~ 426 (427)
T 2pa6_A 388 QIKTGAPARGERTAKYNQLIRIEQELGL-SKYAGRNFRCP 426 (427)
T ss_dssp EEECCSSCSHHHHHHHHHHHHHHHHSSS-CEECGGGCSCC
T ss_pred ccccCCCcchhHHHHHHHHHHHHHHhcc-cccccccccCC
Confidence 9999999999999999999999999998 99999889765
No 11
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=100.00 E-value=6.1e-82 Score=650.54 Aligned_cols=422 Identities=51% Similarity=0.832 Sum_probs=381.4
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcc-cCCccHHHHHHHHHHhHhhhcc
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWD-YHGRGVLKAVQNVNSIIGPALV 79 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~-y~~~~~~~a~~~i~~~l~p~Li 79 (445)
|..|++|++|+|+||+|+++|+|+|+|++|++|.+++|++.++|.+|+.+++|+++. |.++++.+++..|++.|+|.|+
T Consensus 11 ~~~i~~~~~r~i~dsrg~~~v~V~V~td~G~~Gge~~p~~~~tG~~ea~elrd~~~~~~~g~~v~~a~~~i~~~l~p~Li 90 (444)
T 1w6t_A 11 MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAII 90 (444)
T ss_dssp TTBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT
T ss_pred hhhcceeEEEEEEcCCCCceEEEEEEECCCCEeeEecccccccccceeeeeccCcccccccccHHHHHHHHHHHHHHHHc
Confidence 678999999999999999999999999999999447888999999999999988764 8999999999999989999999
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeec
Q 013317 80 GKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVIN 159 (445)
Q Consensus 80 G~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~ 159 (445)
|+||.++++||+.|. .++++.+ ++.++.+|++||||||||+.||.+|+|||+||| |..++++|+|++++++
T Consensus 91 G~d~~~~~~i~~~l~-~~~g~~~-----~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLG---G~~~~~vp~~~~~~~~ 161 (444)
T 1w6t_A 91 GYDVRDQQAIDRAMI-ALDGTPN-----KGKLGANAILGVSIAVARAAADYLEIPLYSYLG---GFNTKVLPTPMMNIIN 161 (444)
T ss_dssp TSBTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHH---CTTCCEECEECEEEEE
T ss_pred CCCHHHHHHHHHHHH-HhhCCCc-----cccchhHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCcccccccccceec
Confidence 999999999999998 6776654 456778999999999999999999999999999 9777889999999999
Q ss_pred CCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhc
Q 013317 160 GGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKG 239 (445)
Q Consensus 160 gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~ 239 (445)
||.|+++++++||+|++|.++.+++++++...++|+++|..+|.| |. ..++|++|+|.++++.+.+.+++||++++++
T Consensus 162 gg~~a~~~l~~qe~mi~p~~~~~~~~a~~~~~~g~~~lK~~lk~k-g~-~~kvG~~gg~~~~~~~d~~~l~avreav~~a 239 (444)
T 1w6t_A 162 GGSHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR-GL-ETAVGDEGGFAPRFEGTEDGVETILAAIEAA 239 (444)
T ss_dssp CGGGCSSSCCCSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHT
T ss_pred cccccccccchhHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhc-CC-ccccCCCCCCCCchHhHHHHHHHHHHHHHHh
Confidence 998887788999999999888899999999999999999888877 53 3778899999988888899999999999999
Q ss_pred CCCc--ceEEEEeccccccccccCcceeecccCCCCCCCCC-----cChHHHHHHHHHhhhcCCeeEEECCCCccCHHHH
Q 013317 240 GYIG--KIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQK-----VSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHY 312 (445)
Q Consensus 240 G~~~--~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~-----~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~ 312 (445)
||.+ ++.|+||+++++||+.++++|+++ . |++ ||++++++++.++.++|++.||||||+++|+++|
T Consensus 240 gy~pG~dv~L~vDaaas~~~~~~n~~y~~~-~------n~~~~~~~~t~~eai~~~~~l~~~~~i~~iEePl~~~d~~~~ 312 (444)
T 1w6t_A 240 GYVPGKDVFLGFDCASSEFYDKERKVYDYT-K------FEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDENDWDGW 312 (444)
T ss_dssp TCCBTTTBEEEEECCGGGGBC--CCCEETH-H------HHCTTCCEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHH
T ss_pred ccCCCCCcEEEEEccchhcccccCCceeec-c------ccCcccCCCCHHHHHHHHHHHHHhCCcEEEECCCChhhHHHH
Confidence 8873 799999999999997666788762 1 345 9999999998776667999999999999999999
Q ss_pred HHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHH
Q 013317 313 AELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIA 392 (445)
Q Consensus 313 ~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~ 392 (445)
++|+++++.++||++||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++++||+++||.+++++
T Consensus 313 ~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~v~~~h~~get~i~~~a 392 (444)
T 1w6t_A 313 KALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIA 392 (444)
T ss_dssp HHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHH
T ss_pred HHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHCCCeEEecCCCCCchHHHHH
Confidence 99999993349999999856889999999999999999999999999999999999999999999999998899999999
Q ss_pred HHHhhhcCCccccCCCCCchhHHHHHHHHHHHHHhCCCccccC-ccCCC
Q 013317 393 DLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAG-TKFRT 440 (445)
Q Consensus 393 ~la~a~~~~~~~~G~~~~~er~~k~n~ll~i~~~l~~~~~~~~-~~~~~ 440 (445)
|||++++++++++|+|+++||++|||||||||++|+++..|.| ++|+.
T Consensus 393 ~lava~~~~~i~~G~~~r~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~ 441 (444)
T 1w6t_A 393 DIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAEYRGLKSFYN 441 (444)
T ss_dssp HHHHHTTCCEEECCCSSSHHHHHHHHHHHHHHHHHGGGCEECGGGGCTT
T ss_pred HHHHhcCCCcccCCCCcccccHHHHHHHHHHHHHhccccccCChhhhcc
Confidence 9999999999999999999999999999999999999999998 77853
No 12
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=100.00 E-value=3e-51 Score=419.25 Aligned_cols=330 Identities=17% Similarity=0.246 Sum_probs=243.0
Q ss_pred CeEEEEEEeCCCcEEEEecc-CCCc-cccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHh
Q 013317 19 PTVEVDVSLSDGTLARAAVP-SGAS-TGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGKDPTEQTQIDNFMVQQ 96 (445)
Q Consensus 19 ~~v~V~V~td~G~~G~g~~~-~~~~-~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~ 96 (445)
.+++|+|+|++|++|||.++ .+.+ +|..|+ .++..+++..|++.++|.|+|+||.+++.+|+.|. .
T Consensus 51 ~~v~V~v~td~G~~G~GE~~~~~~~g~g~~e~-----------~~~~~~~~~~i~~~l~p~L~G~d~~~~~~i~~~l~-~ 118 (413)
T 1kcz_A 51 ESISVLLVLEDGQVAHGDCAAVQYSGAGGRDP-----------LFLAKDFIPVIEKEIAPKLIGREITNFKPMAEEFD-K 118 (413)
T ss_dssp CEEEEEEEETTSCEEEEEECCCTTTTSTTSCS-----------CCCHHHHHHHHHHHTHHHHTTCBCCCHHHHHHHHH-H
T ss_pred cEEEEEEEECCCCEEEEEEccccccccCcccc-----------cccHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHH-h
Confidence 56999999999999999554 3221 221111 12345667778888999999999999999999996 4
Q ss_pred hccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCC-----CcceeeeeeEEeecCCccCCCccccc
Q 013317 97 LDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGN-----KTLVLPVPAFNVINGGSHADNKLAMQ 171 (445)
Q Consensus 97 l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~-----~~~~ip~p~~~~~~gg~~~~~~~~~~ 171 (445)
.... ...++.+|++|||+||||+.||.+|+|||+||| |. .++ |+|+|+.. |+... .
T Consensus 119 ~~~~-------g~~~~~~a~~aid~AlwDl~ak~~g~Pl~~lLG---g~~~~~~~~~--~vp~~~~~-g~~~~----~-- 179 (413)
T 1kcz_A 119 MTVN-------GNRLHTAIRYGITQAILDAVAKTRKVTMAEVIR---DEYNPGAEIN--AVPVFAQS-GDDRY----D-- 179 (413)
T ss_dssp CEET-------TEECCHHHHHHHHHHHHHHHHHHHTSCHHHHHH---HHHSTTCCCC--CCCEECCC-TTCTT----H--
T ss_pred cccC-------CcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhc---ccccCcCccC--CeeeeEec-Ccccc----C--
Confidence 3210 123557899999999999999999999999999 63 333 55556532 21100 0
Q ss_pred ceeeccCCcccHHHHHHHHHHH-HHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH----HHHHHHHHHHh-cCCCcce
Q 013317 172 EFMILPIGASTFKEAMKMGVEV-YHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE----GFELLKTAIAK-GGYIGKI 245 (445)
Q Consensus 172 e~~~~p~~~~~~~ea~~~~~~~-~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~----~l~~v~~ai~~-~G~~~~i 245 (445)
.++..++++.+...++ |+++| .|+| ..+ ....+ .++.+ +++|+ +| +++
T Consensus 180 ------~~~~~~~~a~~~~~~G~~~~~K----iKvG-------~~~------~~~~~~~~~d~~~v-~avR~~~G--~~~ 233 (413)
T 1kcz_A 180 ------NVDKMIIKEADVLPHALINNVE----EKLG-------LKG------EKLLEYVKWLRDRI-IKLRVRED--YAP 233 (413)
T ss_dssp ------HHHHHHHTTCSEEEECCCCCCC----CCCC-------TTS------HHHHHHHHHHHHHH-HHHCSSTT--CCC
T ss_pred ------CHHHHHHHHHHHHHhcchhhee----eccC-------CCc------cchhhHHHHHHHHH-HHHHHhcC--CCc
Confidence 0011222332222334 54432 3333 110 00122 44555 45554 56 479
Q ss_pred EEEEecccc--ccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcC--Cee-EEECCCC----ccCHHHHHHHH
Q 013317 246 VIGMDVAAS--EFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH--PIV-SIEDPFD----QDDWEHYAELT 316 (445)
Q Consensus 246 ~l~vD~~a~--~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~--~i~-~iEdP~~----~~D~~~~~~L~ 316 (445)
.|+||+|.. ++| .||.+++++++.+ ++++ ++. |||||++ ++|+++|++|+
T Consensus 234 ~l~vDaN~~~~~~~--------------------~~~~~~a~~~~~~-L~~~~~~i~~~iEqP~~~~~~~~d~~~~~~l~ 292 (413)
T 1kcz_A 234 IFHIDVYGTIGAAF--------------------DVDIKAMADYIQT-LAEAAKPFHLRIEGPMDVEDRQKQMEAMRDLR 292 (413)
T ss_dssp EEEEECTTHHHHHT--------------------TTCHHHHHHHHHH-HHHHHTTSCEEEECSBCCSSHHHHHHHHHHHH
T ss_pred eEEEecCCCccccc--------------------CCCHHHHHHHHHH-HHhhcCCcceEEecCCCCCCCcccHHHHHHHH
Confidence 999999532 211 0788999998665 6777 766 9999995 56999999999
Q ss_pred HH-----hCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHH
Q 013317 317 GK-----IGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFI 391 (445)
Q Consensus 317 ~~-----~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~ 391 (445)
++ ++ +||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++|++.||.++.+
T Consensus 293 ~~l~~~g~~--ipIa~dE~-~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~~~~~es~i~~~ 369 (413)
T 1kcz_A 293 AELDGRGVD--AELVADEW-CNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCGGTCNETNRSAE 369 (413)
T ss_dssp HHHHHHTCC--EEEEECTT-CCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEECCCTTSCHHHHH
T ss_pred HhhhcCCCC--CcEEeCCC-cCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCCCCCCHHHHH
Confidence 99 66 99999998 578999999999999999999999999999999999999999999998887789988765
Q ss_pred H--HHHhhhcCCcccc--CCCCCchhHHHHHHHHHHHHHhCC
Q 013317 392 A--DLSVGLATGQIKT--GAPCRSERLAKYNQLLRIEEELGP 429 (445)
Q Consensus 392 ~--~la~a~~~~~~~~--G~~~~~er~~k~n~ll~i~~~l~~ 429 (445)
+ |||+++++.+++- |.+.+++|++|||||+|||++|..
T Consensus 370 a~~hlaaa~~~~~i~~~pG~~~~~g~~~~~n~~~r~~~~~~~ 411 (413)
T 1kcz_A 370 VTTNIGMACGARQVLAKPGMGVDEGMMIVKNEMNRVLALVGR 411 (413)
T ss_dssp HHHHHHHHHTCSEEECCSSSSSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCceeecCCCCCCcchhhhHHHHHHHHHHHhc
Confidence 5 8888888888886 999998999999999999999854
No 13
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=100.00 E-value=7e-51 Score=416.02 Aligned_cols=331 Identities=18% Similarity=0.201 Sum_probs=242.4
Q ss_pred CeEEEEEEeCCCcEEEEecc----CCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHH
Q 013317 19 PTVEVDVSLSDGTLARAAVP----SGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGKDPTEQTQIDNFMV 94 (445)
Q Consensus 19 ~~v~V~V~td~G~~G~g~~~----~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~ 94 (445)
++++|+|+|++|++|||+++ +|++.. ++.|.++ .....+++.++|.|+|+||.+++.+|+.|.
T Consensus 51 ~~v~V~v~td~G~~G~GE~~~~~~sGa~~r----------~~~~~~~---~~~~~i~~~l~p~LiG~d~~~~~~i~~~l~ 117 (413)
T 1kko_A 51 ECVSVQLILENGAVAVGDCAAVQYSGAGGR----------DPLFLAE---HFIPFLNDHIKPLLEGRDVDAFLPNARFFD 117 (413)
T ss_dssp EEEEEEEEETTSCEEEEEECCCTTTTSTTC----------CCCCCHH---HHHHHHHHHTHHHHTTCBCSCSHHHHHHHH
T ss_pred ceEEEEEEECCCCEEEEEeccccccccccc----------CccccHH---HHHHHHHHHHHHHHcCCChHhHHHHHHHHH
Confidence 56999999999999999654 333310 1234443 344457778999999999999999999997
Q ss_pred HhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc---eeeeeeEEeecCCccCCCccccc
Q 013317 95 QQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL---VLPVPAFNVINGGSHADNKLAMQ 171 (445)
Q Consensus 95 ~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~---~ip~p~~~~~~gg~~~~~~~~~~ 171 (445)
..... .+....+|++||||||||+.||.+|+|||+||| |.... +-++|+|++ +|.+..+.+
T Consensus 118 -~~~~~-------~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLG---g~~~~~l~~~~vp~y~~--~g~~~~~~~--- 181 (413)
T 1kko_A 118 -KLRID-------GNLLHTAVRYGLSQALLDATALASGRLKTEVVC---DEWQLPCVPEAIPLFGQ--SGDDRYIAV--- 181 (413)
T ss_dssp -HCEET-------TEECCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---HHTTCCCCCCCCCEECC--CTTCTTHHH---
T ss_pred -hhhcc-------cCccHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CccccccccCCeEEEEe--cCccccCCH---
Confidence 43210 111346899999999999999999999999999 74211 125666764 443321100
Q ss_pred ceeeccCCcccHHHHHHHHHHH-HHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH----HHHHHHHHHHh-cCCCcce
Q 013317 172 EFMILPIGASTFKEAMKMGVEV-YHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE----GFELLKTAIAK-GGYIGKI 245 (445)
Q Consensus 172 e~~~~p~~~~~~~ea~~~~~~~-~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~----~l~~v~~ai~~-~G~~~~i 245 (445)
+ +.++++.+...++ |+.+ |.|+| .+ .+.+.+ .++.+ +++|+ +| +++
T Consensus 182 ~--------~~~~~~~~~~~~G~~~~i----K~KvG-------~~------~~~~~~~l~~d~~~v-~aiR~~~G--~~~ 233 (413)
T 1kko_A 182 D--------KMILKGVDVLPHALINNV----EEKLG-------FK------GEKLREYVRWLSDRI-LSLRSSPR--YHP 233 (413)
T ss_dssp H--------HHHHTTCSEEEETTCCCC----CCCCC-------TT------SHHHHHHHHHHHHHH-HHHCSSTT--CCC
T ss_pred H--------HHHHHHHHHHhCCCccEE----EEecC-------CC------hhhHHHHHHHHHHHH-HHHHHhhC--CCC
Confidence 0 0011111111112 3322 23333 11 111222 22344 55654 56 479
Q ss_pred EEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhc--CCee-EEECCCC----ccCHHHHHHHHHH
Q 013317 246 VIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD--HPIV-SIEDPFD----QDDWEHYAELTGK 318 (445)
Q Consensus 246 ~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~--~~i~-~iEdP~~----~~D~~~~~~L~~~ 318 (445)
.|+||+|. +|.+. ..||.+++++++.+ +++ +++. |||||++ ++|+++|++|+++
T Consensus 234 ~L~vDan~---------~~~~~---------~~~~~~~A~~~~~~-L~~~~~~~~l~iEqP~~~~~~~~d~~~~~~l~~~ 294 (413)
T 1kko_A 234 TLHIDVYG---------TIGLI---------FDMDPVRCAEYIAS-LEKEAQGLPLYIEGPVDAGNKPDQIRMLTAITKE 294 (413)
T ss_dssp EEEEECTT---------HHHHH---------TTTCHHHHHHHHHH-TGGGGTTSCEEEECCCCCSSHHHHHHHHHHHHHH
T ss_pred eEEEECCC---------ccccc---------cCCCHHHHHHHHHH-HHhccCCcceEEECCcCCCCCcccHHHHHHHHHh
Confidence 99999952 23221 15899999998765 566 2322 9999999 7899999999999
Q ss_pred -----hCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh--HHH
Q 013317 319 -----IGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED--TFI 391 (445)
Q Consensus 319 -----~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~--~~~ 391 (445)
++ +||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++|+++||.+ +++
T Consensus 295 l~~~g~~--ipIa~dE~-~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~~et~i~~aa~ 371 (413)
T 1kko_A 295 LTRLGSG--VKIVADEW-CNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTCNETEISARTC 371 (413)
T ss_dssp HHHHTCC--CEEEECTT-CCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCTTSCHHHHHHH
T ss_pred cccCCCC--CcEEcCCC-CCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCCCCCHHHHHHH
Confidence 66 99999997 678999999999999999999999999999999999999999999999887679988 678
Q ss_pred HHHHhhhcCCcc--ccCCCCCchhHHHHHHHHHHHHHhC
Q 013317 392 ADLSVGLATGQI--KTGAPCRSERLAKYNQLLRIEEELG 428 (445)
Q Consensus 392 ~~la~a~~~~~~--~~G~~~~~er~~k~n~ll~i~~~l~ 428 (445)
+|||+++++.++ ++|...+++|++|||||+|||+++.
T Consensus 372 ~hlaaa~~~~~ip~kpG~g~~~~~~~~~n~l~r~~~~~~ 410 (413)
T 1kko_A 372 VHVALAARPMRMLIKPGMGFDEGLNIVFNEMNRTIALLQ 410 (413)
T ss_dssp HHHHHHHCCSEEECCSCSSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCcccCCCCCCCCccHHHHHHHHHHHHHHHh
Confidence 999999999999 9999999999999999999999874
No 14
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=100.00 E-value=5e-50 Score=411.36 Aligned_cols=313 Identities=18% Similarity=0.257 Sum_probs=234.2
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGK 81 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 81 (445)
++||+|++..+...+. +.|+|||+||+|++|||++... +. ..++...|++.|+|.|+|+
T Consensus 26 ~~It~v~~~~v~~~~~-~~vlV~v~Td~G~~G~GEa~~~-----------------~~---~~~~~~~i~~~lap~LiG~ 84 (421)
T 4hnl_A 26 TIITDVKSFAIKPDRH-NLVVVKVETNKGISGLGCSTFQ-----------------FR---PLAVKTVVDEYLRPLLMGR 84 (421)
T ss_dssp CBEEEEEEEEECSSSS-CEEEEEEEETTSCCEEEECCCT-----------------TS---HHHHHHHHHHTHHHHHTTC
T ss_pred ceEEEEEEEEECCCCc-eEEEEEEEECCCCEEEEeccCC-----------------CC---HHHHHHHHHHHHHHHHCCC
Confidence 3799999999876544 5799999999999999965431 11 2344556888899999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCC
Q 013317 82 DPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGG 161 (445)
Q Consensus 82 d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg 161 (445)
||.+++++|+.|. ... . ++.+.+..+|+|||||||||+.||.+|+|||+||| |+.++++|+ |+++.+.
T Consensus 85 dp~~ie~i~~~~~-~~~-~-----~~~~~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---G~~r~~v~~--y~~~~~~ 152 (421)
T 4hnl_A 85 DANEIEDIWQVMN-VNS-Y-----WRNGPITNNAISGIDMALWDIKGQLADMPLYQLLG---GKARTAIPA--YTHAVAD 152 (421)
T ss_dssp BTTCHHHHHHHHH-HTT-S-----SCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSCEEE--EEEEEES
T ss_pred ChhhHHHHHHHHH-hhc-c-----ccCCchHHHHHHHHHHHHHHHHHHHhCCCHHHhcC---CccCcccce--ecccCCC
Confidence 9999999999997 321 1 22445667899999999999999999999999999 988888776 4443211
Q ss_pred ccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcc----cCCCCCCC----CCccCchHHHHHHH
Q 013317 162 SHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATN----VGDEGGFA----PNIQESYEGFELLK 233 (445)
Q Consensus 162 ~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~----~~~~g~~~----~~~~~~~~~l~~v~ 233 (445)
+ .++..+++.+...++|+++ |.|+|..... ...+..+. ...+..++.++.+
T Consensus 153 -------~---------~~~~~~~a~~~~~~G~~~~----K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v- 211 (421)
T 4hnl_A 153 -------N---------LDDLYHEIDRFLAAGYRYI----RCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMF- 211 (421)
T ss_dssp -------S---------HHHHHHHHHHHHHTTCSEE----EEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHH-
T ss_pred -------C---------HHHHHHHHHHHHHhhHHHH----hhccccccCCchhccccccccccccccchhHHHHHHHHH-
Confidence 0 1234566666677778765 4566532111 01111111 1111123344444
Q ss_pred HHHH-hcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHH
Q 013317 234 TAIA-KGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHY 312 (445)
Q Consensus 234 ~ai~-~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~ 312 (445)
+++| ++| +++.|++|+ |+.||.++++++. +.+++|++.|||||++++|+++|
T Consensus 212 ~avR~a~G--~~~~l~vDa------------------------n~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~d~~~~ 264 (421)
T 4hnl_A 212 AAIKEKYG--NQFQMLHDV------------------------HERLHPNQAIQFA-KAAEPYQLFFLEDILPPDQSHWL 264 (421)
T ss_dssp HHHHHHHT--TSSEEEEEC------------------------TTCSCHHHHHHHH-HHHGGGCCSEEECCSCGGGGGGH
T ss_pred HHHHHHhC--CCceEeccc------------------------cccCCHHHHHHHH-HHhhhhhhcccccCCcccchHHH
Confidence 2333 346 689999999 4678999999974 56899999999999999999999
Q ss_pred HHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCC-ChhH--
Q 013317 313 AELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGE-TEDT-- 389 (445)
Q Consensus 313 ~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~e-t~~~-- 389 (445)
++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +.+ +.++
T Consensus 265 ~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~a~d~v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~-~~~~s~i~~a 340 (421)
T 4hnl_A 265 TQLRSQSA--TPIATGELF-NNPMEWQELVKNRQIDFMRAHVSQIGGITPALKLAHFCDAMGVRIAWHT-PSDISPVGLA 340 (421)
T ss_dssp HHHHTTCC--CCEEECTTC-CSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCC-CSSSCHHHHH
T ss_pred HHHHhcCC--CCeecCcce-ehhHHHHHHHhcCCceEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeC-CcchhHHHHH
Confidence 99999998 999999985 6799999999999999999999999999999999999999999986444 555 5455
Q ss_pred HHHHHHhhhc
Q 013317 390 FIADLSVGLA 399 (445)
Q Consensus 390 ~~~~la~a~~ 399 (445)
+.+||++++.
T Consensus 341 a~~hl~aa~~ 350 (421)
T 4hnl_A 341 VNTHLNIHLH 350 (421)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHhCC
Confidence 4556665543
No 15
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=5.2e-49 Score=398.67 Aligned_cols=304 Identities=18% Similarity=0.187 Sum_probs=232.7
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEec-cCCCccccccceeeccCCcccCCccHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAV-PSGASTGIYEALELRDGGWDYHGRGVLKAV 67 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~-~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~ 67 (445)
||||++|+++.+. .+.+ +..++|+|+||+|++|||.+ |.+. +.|.+++..++.
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td~G~~G~GE~~~~~~--------------~~y~~e~~~~~~ 69 (381)
T 3fcp_A 4 TATVEQIESWIVDVPTIRPHKLSMTTMGCQSLVIVRLTRSDGICGIGEATTIGG--------------LSYGVESPEAIS 69 (381)
T ss_dssp CCBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEEECSTT--------------TTSSSCCHHHHH
T ss_pred CcEEEEEEEEEEeccccCCeEecccEEEeeeEEEEEEEECCCCEEEeccccCCC--------------CccCCCCHHHHH
Confidence 3899999999883 2233 35699999999999999954 3321 236667788888
Q ss_pred HHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 68 QNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
..|++.++|.|+|+||.+++++|+.|++.+.+ ..+|++|||+||||+.||.+|+|||+||| |..+
T Consensus 70 ~~i~~~l~p~l~G~d~~~~~~~~~~l~~~~~g------------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r 134 (381)
T 3fcp_A 70 SAITHYLTPLLKGQPADNLNALTARMNGAIKG------------NTFAKSAIETALLDAQGKALGLPVSALLG---GALQ 134 (381)
T ss_dssp HHHHHTHHHHHTTSBSSCHHHHHHHHHHHCCS------------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSC
T ss_pred HHHHHHHHHHhcCCCcCCHHHHHHHHHHHhcC------------cHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCC
Confidence 88888899999999999999999999843321 14799999999999999999999999999 9877
Q ss_pred ceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCch
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESY 226 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~ 226 (445)
+++|++ .++..+ + .++.++++.+... .||+++ |.|+|. .+.+.+.
T Consensus 135 ~~v~~~--~t~~~~-------~---------~~~~~~~~~~~~~~~G~~~~----KiKvg~------------~~~~~d~ 180 (381)
T 3fcp_A 135 TALPVL--WTLASG-------D---------TAKDIAEGEKLLAEGRHRAF----KLKIGA------------RELATDL 180 (381)
T ss_dssp SEEEBC--EEECSS-------C---------HHHHHHHHHHHTC----CEE----EEECCS------------SCHHHHH
T ss_pred CceeeE--EEecCC-------C---------hHHHHHHHHHHHHhCCCCEE----EEecCC------------CChHHHH
Confidence 888874 322221 0 1123344544444 367655 456552 1122234
Q ss_pred HHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCc
Q 013317 227 EGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~ 306 (445)
+.++++|++ +| +++.|++|+ |+.||.+++++++ +.+++|++.|||||+++
T Consensus 181 ~~v~avR~a---~g--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~ 230 (381)
T 3fcp_A 181 RHTRAIVEA---LG--DRASIRVDV------------------------NQAWDAATGAKGC-RELAAMGVDLIEQPVSA 230 (381)
T ss_dssp HHHHHHHHH---TC--TTCEEEEEC------------------------TTCBCHHHHHHHH-HHHHHTTCSEEECCBCT
T ss_pred HHHHHHHHH---cC--CCCeEEEEC------------------------CCCCCHHHHHHHH-HHHhhcCccceeCCCCc
Confidence 444444443 45 579999999 5778999999875 56899999999999999
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.|+
T Consensus 231 ~d~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es 306 (381)
T 3fcp_A 231 HDNAALVRLSQQIE--TAILADEAV-ATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGT-MLEG 306 (381)
T ss_dssp TCHHHHHHHHHHSS--SEEEESTTC-CSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECC-SCCC
T ss_pred ccHHHHHHHHHhCC--CCEEECCCc-CCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCC-CCcc
Confidence 99999999999998 999999985 6799999999999999999999999999999999999999999998777 5788
Q ss_pred hhHHHHHHHhhhcCC
Q 013317 387 EDTFIADLSVGLATG 401 (445)
Q Consensus 387 ~~~~~~~la~a~~~~ 401 (445)
.++..+.++++...+
T Consensus 307 ~i~~aa~~hlaaa~~ 321 (381)
T 3fcp_A 307 TVGTVASLHAWSTLP 321 (381)
T ss_dssp HHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhCC
Confidence 777655555544333
No 16
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=100.00 E-value=2.8e-49 Score=405.32 Aligned_cols=311 Identities=16% Similarity=0.220 Sum_probs=235.1
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccC
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
|||||+|+...+ +.++..++|+|+||+|++|||++... +. ..++...|++.|+|.|+|
T Consensus 23 ~mkIt~v~~~~~--~~~~~~v~V~v~td~G~~G~GE~~~~-----------------~~---~~~~~~~i~~~l~p~LiG 80 (425)
T 3vcn_A 23 MLKIIDAKVIVT--CPGRNFVTLKITTEDGITGVGDATLN-----------------GR---ELSVVSFLQDHMVPSLIG 80 (425)
T ss_dssp CCBEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCCT-----------------TC---HHHHHHHHHHTTHHHHTT
T ss_pred CCEEEEEEEEEE--cCCCcEEEEEEEECCCCEEEEeccCC-----------------CC---hHHHHHHHHHHHHHHhCC
Confidence 799999998766 33457899999999999999975321 00 234455677789999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecC
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVING 160 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~g 160 (445)
+||.+++++|+.|++... |+++.+..+|+|||||||||+.||.+|+|||+||| |+.++++|+ |.++.+
T Consensus 81 ~dp~~ie~i~~~~~~~~~-------~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~ 148 (425)
T 3vcn_A 81 RDAHQIEDIWQFFYRGSY-------WRGGPVAMTALAAVDMALWDIKGKVAGLPVYQLLG---GACRTGVTV--YGHANG 148 (425)
T ss_dssp CBTTCHHHHHHHHHHHTS-------SCCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSSSSEEE--EEEEEE
T ss_pred CChhhHHHHHHHHHhhcc-------cCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC---CCCCCeeeE--EEeCCC
Confidence 999999999999983221 22334456899999999999999999999999999 988888887 433322
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCC----cccCCCCC-CCC------C--------
Q 013317 161 GSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDA----TNVGDEGG-FAP------N-------- 221 (445)
Q Consensus 161 g~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~----~~~~~~g~-~~~------~-------- 221 (445)
. + +++..+++.+...+||+++ |.|+|... ...+..+. +.+ .
T Consensus 149 ~-------~---------~e~~~~~a~~~~~~Gf~~i----KlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~ 208 (425)
T 3vcn_A 149 E-------T---------IEDTIAEAVKYKAMGYKAI----RLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAK 208 (425)
T ss_dssp S-------S---------HHHHHHHHHHHHHTTCSEE----EEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHH
T ss_pred C-------C---------HHHHHHHHHHHHHcCCCEE----EEeecCccccccccccccccccCcccccccccccccchh
Confidence 1 1 1234556666666788766 45666310 00000000 011 1
Q ss_pred -ccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEE
Q 013317 222 -IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSI 300 (445)
Q Consensus 222 -~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~i 300 (445)
++.+.+.+++||+++ | +++.|++|+ |++||.++++++. +.++++++.||
T Consensus 209 ~~~~d~e~v~avR~a~---G--~d~~l~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~~i 258 (425)
T 3vcn_A 209 YLNSVPKLFERAREVL---G--WDVHLLHDV------------------------HHRLTPIEAARLG-KDLEPYRLFWL 258 (425)
T ss_dssp HHTTTHHHHHHHHHHH---C--SSSEEEEEC------------------------TTCCCHHHHHHHH-HHHGGGCCSEE
T ss_pred HHHHHHHHHHHHHHHc---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCEE
Confidence 233456666666655 5 579999999 4678999999874 56899999999
Q ss_pred ECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEec
Q 013317 301 EDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMAS 380 (445)
Q Consensus 301 EdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~ 380 (445)
|||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++
T Consensus 259 EqP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h 335 (425)
T 3vcn_A 259 EDSVPAENQAGFRLIRQHTT--TPLAVGEIF-AHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCH 335 (425)
T ss_dssp ECCSCCSSTTHHHHHHHHCC--SCEEECTTC-CSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCC
T ss_pred ECCCChhhHHHHHHHHhcCC--CCEEeCCCc-CCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeec
Confidence 99999999999999999998 999999985 679999999999999999999999999999999999999999998766
Q ss_pred CCCCCChhHHH--HHHHhhh
Q 013317 381 HRSGETEDTFI--ADLSVGL 398 (445)
Q Consensus 381 ~~~~et~~~~~--~~la~a~ 398 (445)
++..++.++.+ +||+.++
T Consensus 336 ~~~~~s~ig~aA~~hlaaa~ 355 (425)
T 3vcn_A 336 GATDLSPVTMAAALHFDMSI 355 (425)
T ss_dssp CCTTSCHHHHHHHHHHHHTC
T ss_pred cCCcccHHHHHHHHHHHHhC
Confidence 54336766654 5555543
No 17
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=100.00 E-value=1e-48 Score=396.49 Aligned_cols=304 Identities=18% Similarity=0.227 Sum_probs=236.1
Q ss_pred ceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEec-cCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 3 TINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAV-PSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 3 ~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~-~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
+|++|+++.+. .+.+ +..++|+|+||+|++|||++ |.+ .+.|.+++..++...
T Consensus 7 ~I~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~--------------~~~y~~e~~~~~~~~ 72 (382)
T 3dgb_A 7 AIESIETIIVDLPTIRPHKLAMHTMQNQTLVLIRLRCADGIEGLGESTTIG--------------GLAYGNESPDSIKTN 72 (382)
T ss_dssp BEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECST--------------TTTSSSCCHHHHHHH
T ss_pred eeeEEEEEEEeeccCCCeEecCeEEeeeeEEEEEEEECCCCEEEEecccCC--------------CCccCCCCHHHHHHH
Confidence 49999998772 3444 35699999999999999954 322 123666778888888
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
|++.++|.|+|+||.+++++|+.|++.+.+ ..+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 73 i~~~l~p~liG~d~~~~~~~~~~l~~~~~g------------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~ 137 (382)
T 3dgb_A 73 IDRFVAPLLIGQDASNINAAMLRLEQSIRG------------NTFAKSGIESALLDAQGKRLGLPVSELLG---GRVRDA 137 (382)
T ss_dssp HHHTHHHHHTTSBTTCHHHHHHHHHHHCCS------------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSE
T ss_pred HHHHHHHHhcCCCccCHHHHHHHHHHHhcC------------chHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCe
Confidence 888899999999999999999999843321 14799999999999999999999999999 987788
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
+|++ .++..+ + ..+.++++.+... .||+++ |.|+|. .+.+.+.+.
T Consensus 138 v~~~--~t~~~~-------~---------~~~~~~~~~~~~~~~G~~~~----KiKvg~------------~~~~~d~~~ 183 (382)
T 3dgb_A 138 LPVA--WTLASG-------D---------TAKDIAEAQKMLDLRRHRIF----KLKIGA------------GEVDRDLAH 183 (382)
T ss_dssp EEBC--EEECSS-------C---------HHHHHHHHHHHHHTTSCSEE----EEECCS------------SCHHHHHHH
T ss_pred eeEE--EEecCC-------C---------hHHHHHHHHHHHHhCCCCEE----EEeeCC------------CCHHHHHHH
Confidence 8874 222211 0 1123345544444 356554 345542 112334555
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
+++||+++ | +++.|++|+ |++||.++++++. +.++++++.|||||++++|
T Consensus 184 v~avR~a~---g--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~~d 233 (382)
T 3dgb_A 184 VIAIKKAL---G--DSASVRVDV------------------------NQAWDEAVALRAC-RILGGNGIDLIEQPISRNN 233 (382)
T ss_dssp HHHHHHHH---G--GGSEEEEEC------------------------TTCBCHHHHHHHH-HHHHTTTCCCEECCBCTTC
T ss_pred HHHHHHHc---C--CCCeEEEeC------------------------CCCCCHHHHHHHH-HHHhhcCcCeeeCCCCccC
Confidence 65565555 4 579999999 5678999999875 5689999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.|+.+
T Consensus 234 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i 309 (382)
T 3dgb_A 234 RAGMVRLNASSP--APIMADESI-ECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGT-MLEGGI 309 (382)
T ss_dssp HHHHHHHHHHCS--SCEEESTTC-SSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SCCCHH
T ss_pred HHHHHHHHHhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecC-CCccHH
Confidence 999999999998 999999985 6799999999999999999999999999999999999999999998777 578887
Q ss_pred HHHHHHHhhhcCCcc
Q 013317 389 TFIADLSVGLATGQI 403 (445)
Q Consensus 389 ~~~~~la~a~~~~~~ 403 (445)
+..+.++++...+++
T Consensus 310 g~aa~~hlaaa~~~~ 324 (382)
T 3dgb_A 310 GTLASAHAFLTLNKL 324 (382)
T ss_dssp HHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHHcCCCC
Confidence 766655555444443
No 18
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=100.00 E-value=7.5e-49 Score=402.64 Aligned_cols=317 Identities=13% Similarity=0.124 Sum_probs=231.7
Q ss_pred CcceeEEEEEEEecC----CCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhh
Q 013317 1 MVTINAVKARQIFDS----RGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGP 76 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~----~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p 76 (445)
||||++|+++.+... .++..++|+|+||+|++|||++.... ++ ..++...|++.++|
T Consensus 1 mMkIt~i~~~~~~~p~~~~~~~~~v~V~v~Td~G~~G~GE~~~~~----------------~~---~~~v~~~i~~~l~p 61 (433)
T 3rcy_A 1 MVKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAAS----------------VG---PEAMRAVIEDVFAR 61 (433)
T ss_dssp -CCEEEEEEEEECCCTTCTTCSCEEEEEEEETTSCEEEEEECCCS----------------SC---HHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEEcCCCCccCCceEEEEEEEECCCCEEEEeccCCC----------------CC---HHHHHHHHHHHHHH
Confidence 899999999988431 14578999999999999999743211 11 23445567788999
Q ss_pred hccCCCCCCHHHHHHHHHHhhccCCCcccccccc-ccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeE
Q 013317 77 ALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQK-LGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAF 155 (445)
Q Consensus 77 ~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~-~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~ 155 (445)
.|+|+||.+++++|+.|++... |+++. +.++|+|||||||||+.||.+|+|||+||| |+.++++|+ |
T Consensus 62 ~LiG~dp~~ie~~~~~l~~~~~-------~~~g~~~~~~A~saID~ALWDl~gK~~g~Pv~~LLG---G~~r~~v~~--y 129 (433)
T 3rcy_A 62 HMEGENPENIELMFRRVYSSGF-------TQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLG---GKMNPRIRA--Y 129 (433)
T ss_dssp HTTTSCTTCHHHHHHHHHHTTT-------CCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSCSSEEE--E
T ss_pred HhCCCCcccHHHHHHHHHhccc-------ccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCeEEE--E
Confidence 9999999999999999983211 11222 456799999999999999999999999999 987888877 5
Q ss_pred Eeec--CCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCC---CccCchHHHH
Q 013317 156 NVIN--GGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAP---NIQESYEGFE 230 (445)
Q Consensus 156 ~~~~--gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~---~~~~~~~~l~ 230 (445)
+++. +|....... ..+++..+++.+...+||+++ |.|+|..... ..|..+ +++.+.+.++
T Consensus 130 ~~~~~~~g~~~~~~~--------~~~e~~~~~a~~~~~~Gf~~i----Klk~g~~~~~---~~G~~~~~~~~~~d~e~v~ 194 (433)
T 3rcy_A 130 TYLYPLPHHPITPFW--------TSADMAAESAADCVARGYTAV----KFDPAGPYTL---RGGHMPAMTDISLSVEFCR 194 (433)
T ss_dssp EECCCCTTSCHHHHT--------TCHHHHHHHHHHHHHTTCSEE----EECCSCCCBT---TCCBCCCHHHHHHHHHHHH
T ss_pred EEEcccCCcccccCC--------CCHHHHHHHHHHHHHcCCCEE----EEcCCCCccc---ccCCCcchhhHHHHHHHHH
Confidence 4431 120000000 011234556666666677665 3455432110 011122 1222334444
Q ss_pred HHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHH
Q 013317 231 LLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~ 310 (445)
+||+++ | +++.|++|+ |++||.++++++. +.++++++.|||||++++|++
T Consensus 195 avR~av---G--~d~~L~vDa------------------------n~~~t~~~A~~~~-~~Le~~~i~~iEeP~~~~~~~ 244 (433)
T 3rcy_A 195 KIRAAV---G--DKADLLFGT------------------------HGQFTTAGAIRLG-QAIEPYSPLWYEEPVPPDNVG 244 (433)
T ss_dssp HHHHHH---T--TSSEEEECC------------------------CSCBCHHHHHHHH-HHHGGGCCSEEECCSCTTCHH
T ss_pred HHHHHh---C--CCCeEEEeC------------------------CCCCCHHHHHHHH-HHhhhcCCCEEECCCChhhHH
Confidence 444444 6 579999999 4678899999874 568999999999999999999
Q ss_pred HHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHH
Q 013317 311 HYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTF 390 (445)
Q Consensus 311 ~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~ 390 (445)
++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|+ .++.++.
T Consensus 245 ~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~g~~D~v~~d~~~~GGit~~~kia~lA~~~gv~~~-~h~-~~s~i~~ 319 (433)
T 3rcy_A 245 AMAQVARAVR--IPVATGERL-TTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMA-PHL-YAGPVEW 319 (433)
T ss_dssp HHHHHHHHSS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHTTTCEEC-CCC-SSCHHHH
T ss_pred HHHHHHhccC--CCEEecCCC-CCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEE-ecC-CCCHHHH
Confidence 9999999998 999999984 7799999999999999999999999999999999999999999986 553 4887765
Q ss_pred HHHHHhhh
Q 013317 391 IADLSVGL 398 (445)
Q Consensus 391 ~~~la~a~ 398 (445)
++.++++.
T Consensus 320 aa~lhlaa 327 (433)
T 3rcy_A 320 AANVHFAA 327 (433)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55544443
No 19
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=100.00 E-value=1.2e-48 Score=399.25 Aligned_cols=317 Identities=18% Similarity=0.184 Sum_probs=236.9
Q ss_pred cceeEEEEEEEecCCCCC--eEEEEEEeCCCcEEEEec-cCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhc
Q 013317 2 VTINAVKARQIFDSRGNP--TVEVDVSLSDGTLARAAV-PSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPAL 78 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~--~v~V~V~td~G~~G~g~~-~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~L 78 (445)
|||++|+++.+..+.+++ +++|+|+|++|++|||++ +.. | .+..++...|++ |+|.|
T Consensus 3 MkI~~i~~~~~~~~~~~~~~~v~V~v~td~G~~G~Ge~~~~~---g----------------~~~~~~~~~i~~-l~p~l 62 (403)
T 2ox4_A 3 LKITKIEIFHVHTRPQSGQRPILVKVSTDEGIYGLGEAGIAY---G----------------VGGSAAAGILKD-YAALL 62 (403)
T ss_dssp CCEEEEEEEEECCCTTTCCCCEEEEEEETTSCEEEEEESCSS---S----------------SCHHHHHHHHHH-HHHHH
T ss_pred CeEEEEEEEEecCCCCCCccceEEEEEeCCCCEEEEeecCCC---C----------------CchHHHHHHHHH-HHHHc
Confidence 799999999998766555 689999999999999976 541 1 113455566776 99999
Q ss_pred cCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEe-
Q 013317 79 VGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNV- 157 (445)
Q Consensus 79 iG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~- 157 (445)
+|+||.+++++|+.|. .... |..++++++.+|++|||+||||+.||.+|+|||+||| |..++++| +|++
T Consensus 63 ~G~d~~~~~~i~~~l~-~~~~----~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~vp--~y~~~ 132 (403)
T 2ox4_A 63 IGEDPFNTEAIWEKLF-KKTF----WGQGGGTVIFSGISAFDIAFWDIKGKALNLPVYKLLG---GKNREDLR--VYASQ 132 (403)
T ss_dssp TTCCTTCHHHHHHHHH-HSSS----GGGTCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSSEE--EEEEC
T ss_pred CCCCHHHHHHHHHHHH-Hhcc----cccCCcHHHHhHHHHHHHHHHHHhHhHcCCcHHHHcC---CCCCCcee--eeEee
Confidence 9999999999999998 3220 1012345567899999999999999999999999999 97666555 4765
Q ss_pred ec-C-CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhc------CCCCcccCCCCCCCC--CccCchH
Q 013317 158 IN-G-GSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKY------GQDATNVGDEGGFAP--NIQESYE 227 (445)
Q Consensus 158 ~~-g-g~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~------G~~~~~~~~~g~~~~--~~~~~~~ 227 (445)
++ | +.|+.+..+.++ .++++.+...++|+.+| .|. |.. -.+..+++.+ +.+.+.+
T Consensus 133 i~~g~~~~~~~~~~~e~---------~~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~--~~s~~~g~~~~~~~~~~~e 197 (403)
T 2ox4_A 133 LQFGWGKERKSKGRKEE---------YAEEALKAVAEGYDAVK----VDVLAHDRNGSR--EGVFLEGPLPSETIKIGVE 197 (403)
T ss_dssp GGGCSSSSCCCCCSHHH---------HHHHHHHHHHTTCSEEE----ECCSSSCTTSCC--TTCCCSSSCCHHHHHHHHH
T ss_pred ccCCccccccccCCHHH---------HHHHHHHHHHcCCCEEE----EeccccCCcccc--ccCcccCCCchHHHHHHHH
Confidence 55 4 445443333332 34566666667777664 332 211 0111223221 1122334
Q ss_pred HHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCcc
Q 013317 228 GFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~ 307 (445)
.+++||++ +| +++.|++|+ |++||.+++++++. .+++|++.|||||++++
T Consensus 198 ~v~avr~a---vG--~d~~l~vDa------------------------n~~~~~~~ai~~~~-~l~~~~i~~iE~P~~~~ 247 (403)
T 2ox4_A 198 RVEAIRNA---VG--PDVDIIVEN------------------------HGHTDLVSAIQFAK-AIEEFNIFFYEEINTPL 247 (403)
T ss_dssp HHHHHHHH---HC--TTSEEEEEC------------------------TTCSCHHHHHHHHH-HHGGGCEEEEECCSCTT
T ss_pred HHHHHHHH---hC--CCCeEEEEC------------------------CCCCCHHHHHHHHH-HHHhhCCCEEeCCCChh
Confidence 44444444 46 579999999 45688999999855 58999999999999999
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||++ .++++++++++.+++|+++||++|+||||++++++++|+++|+++++++ +. +.
T Consensus 248 d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~-~~-s~ 322 (403)
T 2ox4_A 248 NPRLLKEAKKKID--IPLASGERI-YSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHV-AG-TG 322 (403)
T ss_dssp STHHHHHHHHTCC--SCEEECTTC-CHHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCC-CS-CH
T ss_pred hHHHHHHHHHhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecC-CC-CH
Confidence 9999999999988 999999996 5599999999999999999999999999999999999999999987654 44 77
Q ss_pred hHHH--HHHHhhh
Q 013317 388 DTFI--ADLSVGL 398 (445)
Q Consensus 388 ~~~~--~~la~a~ 398 (445)
++.. +||+.++
T Consensus 323 i~~aa~~hlaaa~ 335 (403)
T 2ox4_A 323 VAEAASLHAEIAI 335 (403)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhC
Confidence 6654 4555543
No 20
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=5.8e-49 Score=402.38 Aligned_cols=320 Identities=13% Similarity=0.117 Sum_probs=242.8
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGK 81 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 81 (445)
|||++|+++.+. +. .++++|+|+||+| +|||+++.+ .+..++...|++ ++|.|+|+
T Consensus 6 MkI~~i~~~~~~-~~-~~~v~V~v~td~G-~G~Ge~~~g--------------------~~~~~~~~~i~~-l~p~liG~ 61 (410)
T 2qq6_A 6 PRITRVETAAIR-AV-GPSVLVRVWAGDE-HGLGECYPS--------------------APAAGIHHIVMN-MEEQLLGE 61 (410)
T ss_dssp CCCCEEEEEEEC-CC--CEEEEEEEETTE-EEEEEECCC--------------------SCHHHHHHHHHT-THHHHTTC
T ss_pred ceEeEEEEEEEC-CC-CCEEEEEEEECCc-EEEEEecCC--------------------CChHHHHHHHHH-HHHHhCCC
Confidence 699999999997 44 4589999999999 999976432 125666677776 99999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeec-C
Q 013317 82 DPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVIN-G 160 (445)
Q Consensus 82 d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~-g 160 (445)
||.+++++|+.|.+...++.+ +++++.+|++||||||||+.||.+|+|||+||| |..++++| +|++++ |
T Consensus 62 d~~~~~~i~~~l~~~~~~~~~-----~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~~~~~vp--~y~~~~~g 131 (410)
T 2qq6_A 62 DPRDVERLYEKMRRWNIFTGG-----QAGAVITALSGIETALWDLAGKLQGVPVYRLLG---GAFRRRVR--LYADCNAG 131 (410)
T ss_dssp CTTCHHHHHHHHHHHTTTTTS-----SSSHHHHHHHHHHHHHHHHHHHHHTSCGGGGTT---CCSCSEEE--EEEECCCS
T ss_pred CccHHHHHHHHHHHhhhcccC-----CchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCccCcee--EEEecccc
Confidence 999999999999832212111 345667899999999999999999999999999 97665555 476655 4
Q ss_pred -CccCCCcc-cccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhc----CCCCcccCCCCCCCC--CccCchHHHHHH
Q 013317 161 -GSHADNKL-AMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKY----GQDATNVGDEGGFAP--NIQESYEGFELL 232 (445)
Q Consensus 161 -g~~~~~~~-~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~----G~~~~~~~~~g~~~~--~~~~~~~~l~~v 232 (445)
+.|+.+.+ +++++++.| ++.++++.+...+||+.+| .|. |..... ++|++.+ +.+.+.+.+++|
T Consensus 132 ~~~h~~~~~~~~~~~~~~~--~~~~~~a~~~~~~Gf~~vK----ik~~~~~G~~~~~--~~G~~~~~~~~~~~~e~v~av 203 (410)
T 2qq6_A 132 TVDAAAHHIEGGLFEEGSN--EEYIAVAREAVERGFDAIK----LDVDDITGPLHRD--FWNGAISPREHEAMVARVAAV 203 (410)
T ss_dssp EECTTCCEEECCTTCSTHH--HHHHHHHHHHHHTTCSEEE----EECCCSSSTTCSC--SSSCCCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCH--HHHHHHHHHHHHcCCCEEE----eeccccCCcccCC--cCccccchhhHHHHHHHHHHH
Confidence 45554433 355655433 3455667776667777664 343 321111 3455543 223334555555
Q ss_pred HHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHH
Q 013317 233 KTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHY 312 (445)
Q Consensus 233 ~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~ 312 (445)
|+++ | +++.|++|+ |++||.+++++++ +.+++|++.|||||++++|++++
T Consensus 204 Rea~---G--~d~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i~~iEeP~~~~d~~~~ 253 (410)
T 2qq6_A 204 REAV---G--PEVEVAIDM------------------------HGRFDIPSSIRFA-RAMEPFGLLWLEEPTPPENLDAL 253 (410)
T ss_dssp HHHH---C--SSSEEEEEC------------------------TTCCCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHHH
T ss_pred HHhc---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHhhcCCCeEECCCChhhHHHH
Confidence 5544 5 579999999 3568889999985 55899999999999999999999
Q ss_pred HHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHH-
Q 013317 313 AELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFI- 391 (445)
Q Consensus 313 ~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~- 391 (445)
++|+++++ +||++||+. .++++++++++.+++|++++|++|+||||++++++++|+++|+++++++ +. +.++..
T Consensus 254 ~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~-~~-s~i~~aa 328 (410)
T 2qq6_A 254 AEVRRSTS--TPICAGENV-YTRFDFRELFAKRAVDYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHN-VS-SPVGTVA 328 (410)
T ss_dssp HHHHTTCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBC-CS-CHHHHHH
T ss_pred HHHHhhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecC-CC-cHHHHHH
Confidence 99999988 999999985 6799999999999999999999999999999999999999999987644 44 776654
Q ss_pred -HHHHhhh
Q 013317 392 -ADLSVGL 398 (445)
Q Consensus 392 -~~la~a~ 398 (445)
+||+.++
T Consensus 329 ~~hlaaa~ 336 (410)
T 2qq6_A 329 AAHVCAAV 336 (410)
T ss_dssp HHHHHHSC
T ss_pred HHHHHHhC
Confidence 5555544
No 21
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=100.00 E-value=1.3e-48 Score=400.35 Aligned_cols=310 Identities=14% Similarity=0.204 Sum_probs=231.6
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGK 81 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 81 (445)
||||+|+...+ +.++..++|+|+||+|++|||++... +. ..++...|++.|+|.|+|+
T Consensus 23 mkIt~v~~~~~--~~~~~~v~V~v~td~Gi~G~GE~~~~-----------------~~---~~~~~~~i~~~l~p~LiG~ 80 (424)
T 3v3w_A 23 MKIVDAKVIVT--CPGRNFVTLKIVTDQGIYGIGDATLN-----------------GR---EKSVVSYLEDYLIPVLIGR 80 (424)
T ss_dssp CCEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCCT-----------------TC---HHHHHHHHHHTHHHHHTTS
T ss_pred CEEEEEEEEEE--cCCCCEEEEEEEECCCCEEEEeccCC-----------------CC---hHHHHHHHHHHHHHHhcCC
Confidence 79999988766 33456899999999999999975321 00 2344556777899999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCC
Q 013317 82 DPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGG 161 (445)
Q Consensus 82 d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg 161 (445)
||.+++++|+.|++... |+++.+..+|+|||||||||+.||.+|+|||+||| |+.++++|+ |.++++.
T Consensus 81 dp~~ie~i~~~~~~~~~-------~~~g~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~ 148 (424)
T 3v3w_A 81 DPQQIEDIWQFFYRGAY-------WRRGPVGMTALAAIDVALWDIKAKLANMPLYQLLG---GKSRERILS--YTHANGK 148 (424)
T ss_dssp CTTCHHHHHHHHHHHTS-------SCCCHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHT---CCSCSSEEE--EEEEEES
T ss_pred ChhhHHHHHHHHHhccc-------cCCCchHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CcCCCceeE--EEeCCCC
Confidence 99999999999983221 22334446899999999999999999999999999 988888887 4333221
Q ss_pred ccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCc--ccCC--C-CCCC------CC---------
Q 013317 162 SHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDAT--NVGD--E-GGFA------PN--------- 221 (445)
Q Consensus 162 ~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~--~~~~--~-g~~~------~~--------- 221 (445)
+ +++..+++.+...+||+++ |.|+|.... ..+. . ..+. +.
T Consensus 149 -------~---------~e~~~~~a~~~~~~Gf~~i----KlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~ 208 (424)
T 3v3w_A 149 -------D---------LDSTLEAVRKAKDKGYKAI----RVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKY 208 (424)
T ss_dssp -------S---------HHHHHHHHHHHHHTTCSEE----EEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHH
T ss_pred -------C---------HHHHHHHHHHHHHcCCCEE----EEeccCccccccccccccccccccccccccccccccchhH
Confidence 1 1234556666666788766 456663100 0000 0 0001 11
Q ss_pred ccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEE
Q 013317 222 IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIE 301 (445)
Q Consensus 222 ~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iE 301 (445)
++.+.+.+++||++ +| +++.|++|+ |++||.++++++. +.++++++.|||
T Consensus 209 ~~~d~e~v~avR~a---vG--~d~~l~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~~iE 258 (424)
T 3v3w_A 209 LNYIPDVFAAVRKE---FG--PDIHLLHDV------------------------HHRLTPIEAARLG-KALEPYHLFWME 258 (424)
T ss_dssp HHHHHHHHHHHHHH---HC--SSSEEEEEC------------------------TTCCCHHHHHHHH-HHHGGGCCSEEE
T ss_pred HHHHHHHHHHHHHH---cC--CCCcEEEeC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEE
Confidence 12223444444444 46 589999999 4678999999875 568999999999
Q ss_pred CCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecC
Q 013317 302 DPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASH 381 (445)
Q Consensus 302 dP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~ 381 (445)
||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++++
T Consensus 259 qP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 335 (424)
T 3v3w_A 259 DAVPAENQESFKLIRQHTT--TPLAVGEVF-NSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHG 335 (424)
T ss_dssp CCSCCSSTTHHHHHHHHCC--SCEEECTTC-CSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECC
T ss_pred CCCChHhHHHHHHHHhhCC--CCEEEccCc-CCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecC
Confidence 9999999999999999998 999999985 6799999999999999999999999999999999999999999987666
Q ss_pred CCCCChhHH--HHHHHhhh
Q 013317 382 RSGETEDTF--IADLSVGL 398 (445)
Q Consensus 382 ~~~et~~~~--~~~la~a~ 398 (445)
+..++.++. .+||+.++
T Consensus 336 ~~~~s~ig~aA~~hlaaa~ 354 (424)
T 3v3w_A 336 ATDLSPVCMGAALHFDYWV 354 (424)
T ss_dssp CTTSCHHHHHHHHHHHHHC
T ss_pred CCcccHHHHHHHHHHHHhC
Confidence 433676654 45555554
No 22
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=100.00 E-value=7.7e-49 Score=401.54 Aligned_cols=311 Identities=18% Similarity=0.238 Sum_probs=230.7
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGK 81 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 81 (445)
||||+|++..+.. .+...++|+|+||+|++|||++... +. ..+....|++.|+|.|+|+
T Consensus 27 mkIt~v~~~~~~~-~~~~~v~V~v~td~Gi~G~GE~~~~-----------------~~---~~~~~~~i~~~l~p~LiG~ 85 (422)
T 3tji_A 27 VIIKNIECFITRP-DRHNLVTVRVTTEQGITGHGCATFQ-----------------QR---PLAVKTLVDEYLQPLMIGR 85 (422)
T ss_dssp CBEEEEEEEEECS-SSSCEEEEEEEETTSCCEEEECCCT-----------------TS---HHHHHHHHHHTHHHHHTTS
T ss_pred cEEEEEEEEEEcC-CCccEEEEEEEECCCCEEEEeccCC-----------------CC---HHHHHHHHHHHHHHHhCCC
Confidence 8999999887632 1236899999999999999965321 11 2344556777899999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCC
Q 013317 82 DPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGG 161 (445)
Q Consensus 82 d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg 161 (445)
||.+++++|+.|+ ... +|+++.+..+|+|||||||||+.||.+|+|||+||| |+.++++|+ |+++++.
T Consensus 86 dp~~ie~~~~~l~-~~~------~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~ 153 (422)
T 3tji_A 86 DANNIEDLWQMMN-VNA------YWRNGPLMNNAISGVDMALWDIKGQLAGMPLYQLFG---GKSRDAIPA--YSHASGE 153 (422)
T ss_dssp BTTCHHHHHHHHH-HTT------SSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSCEEE--EEEEEES
T ss_pred CcccHHHHHHHHH-Hhh------hccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCCeEEE--EEEeCCC
Confidence 9999999999998 321 122334456899999999999999999999999999 988888876 4433221
Q ss_pred ccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCccc----C----CCCCCCCC---ccCchHHHH
Q 013317 162 SHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNV----G----DEGGFAPN---IQESYEGFE 230 (445)
Q Consensus 162 ~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~----~----~~g~~~~~---~~~~~~~l~ 230 (445)
+ +++..+++.+...+||+++ |.|+|...... . ..|.+... ++.+.+.++
T Consensus 154 -------~---------~e~~~~~a~~~~~~G~~~i----KlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~ 213 (422)
T 3tji_A 154 -------T---------LEALFASVDALIAQGYRHI----RCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFH 213 (422)
T ss_dssp -------S---------HHHHHHHHHHHHHTTCSEE----EEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHH
T ss_pred -------C---------HHHHHHHHHHHHHcCCCEE----EEeeccCCcccccccccccccccccccchhHHHHHHHHHH
Confidence 1 1233456666666778765 45666321000 0 00000000 112234444
Q ss_pred HHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHH
Q 013317 231 LLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~ 310 (445)
+||++ +| +++.|++|+ |++||.++++++. +.++++++.|||||++++|++
T Consensus 214 avR~a---vG--~d~~L~vDa------------------------N~~~~~~~A~~~~-~~Le~~~i~~iEqP~~~~d~~ 263 (422)
T 3tji_A 214 ALREK---YG--WKLHILHDV------------------------HERLFPQQAVQLA-KQLEPFQPYFIEDILPPQQSA 263 (422)
T ss_dssp HHHHH---HC--SSSEEEEEC------------------------TTCSCHHHHHHHH-HHHGGGCCSEEECCSCGGGGG
T ss_pred HHHHH---cC--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhhCCCeEECCCChhhHH
Confidence 44444 46 589999999 4678999999874 568999999999999999999
Q ss_pred HHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHH
Q 013317 311 HYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTF 390 (445)
Q Consensus 311 ~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~ 390 (445)
++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++++..++.++.
T Consensus 264 ~~~~l~~~~~--iPIa~dE~~-~~~~~~~~ll~~ga~d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~~~~s~Ig~ 340 (422)
T 3tji_A 264 WLEQVRQQSC--VPLALGELF-NNPAEWHDLIVNRRIDFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGPGDMTPIGV 340 (422)
T ss_dssp GHHHHHHHCC--CCEEECTTC-CSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSSSCHHHH
T ss_pred HHHHHHhhCC--CCEEEeCCc-CCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCCCccHHHH
Confidence 9999999998 999999985 6799999999999999999999999999999999999999999986555433677665
Q ss_pred H--HHHHhhh
Q 013317 391 I--ADLSVGL 398 (445)
Q Consensus 391 ~--~~la~a~ 398 (445)
+ +||+.++
T Consensus 341 aA~~hlaaa~ 350 (422)
T 3tji_A 341 AVNTHLNIHL 350 (422)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 4 5555554
No 23
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=100.00 E-value=1.4e-48 Score=399.70 Aligned_cols=310 Identities=16% Similarity=0.177 Sum_probs=231.9
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccC
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
+||||+|+...+ +.++..++|+|+||+|++|||++... +. ..++...|++.|+|.|+|
T Consensus 16 ~mkIt~v~~~~~--~~~~~~~~V~v~td~G~~G~GE~~~~-----------------~~---~~~~~~~i~~~l~p~LiG 73 (418)
T 3r4e_A 16 HMKITAARVIIT--CPGRNFVTLKIETDQGVYGIGDATLN-----------------GR---ELSVVAYLQEHVAPCLIG 73 (418)
T ss_dssp CCCEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCCT-----------------TC---HHHHHHHHHHTHHHHHTT
T ss_pred CCEEEEEEEEEE--cCCCcEEEEEEEECCCCEEEEeccCC-----------------CC---hHHHHHHHHHHHHHHhcC
Confidence 389999998766 33457899999999999999975321 00 234455677789999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecC
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVING 160 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~g 160 (445)
+||.+++++|+.|++... |+++.+..+|+|||||||||+.||.+|+|||+||| |+.++++|++ .++.+
T Consensus 74 ~dp~~ie~l~~~~~~~~~-------~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y--~~~~~ 141 (418)
T 3r4e_A 74 MDPRRIEDIWQYVYRGAY-------WRRGPVTMRAIAAVDMALWDIKAKMAGMPLYQLLG---GRSRDGIMVY--GHANG 141 (418)
T ss_dssp SCTTCHHHHHHHHHHHTS-------SCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSCSSEEEE--EEEEE
T ss_pred CChhhHHHHHHHHHHhcc-------cCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CccCCeeeEE--EeCCC
Confidence 999999999999983221 22334446899999999999999999999999999 9888888874 33322
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCccc--C--C--------CCCCCCC-------
Q 013317 161 GSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNV--G--D--------EGGFAPN------- 221 (445)
Q Consensus 161 g~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~--~--~--------~g~~~~~------- 221 (445)
. + +++..+++.+...+||+++ |+|+|...... + + .++ .+.
T Consensus 142 ~-------~---------~e~~~~~a~~~~~~Gf~~~----K~k~G~~~~~~~~g~~~~~~~~~~~~~~-~p~~~~~~~~ 200 (418)
T 3r4e_A 142 S-------D---------IAETVEAVGHYIDMGYKAI----RAQTGVPGIKDAYGVGRGKLYYEPADAS-LPSVTGWDTR 200 (418)
T ss_dssp S-------S---------HHHHHHHHHHHHHTTCSEE----EEEECCTTC------------------C-CCCEEEECHH
T ss_pred C-------C---------HHHHHHHHHHHHHcCCCEE----EEecCCcccccccccccccccccccccc-ccccccccch
Confidence 1 1 1233456666666778766 45666311000 0 0 000 011
Q ss_pred --ccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeE
Q 013317 222 --IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVS 299 (445)
Q Consensus 222 --~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~ 299 (445)
++.+.+.+++||+++ | +++.|++|+ |++||.++++++. +.++++++.|
T Consensus 201 ~~~~~d~~~v~avR~a~---G--~d~~l~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~~ 250 (418)
T 3r4e_A 201 KALNYVPKLFEELRKTY---G--FDHHLLHDG------------------------HHRYTPQEAANLG-KMLEPYQLFW 250 (418)
T ss_dssp HHHHHHHHHHHHHHHHH---C--SSSEEEEEC------------------------TTCSCHHHHHHHH-HHHGGGCCSE
T ss_pred hHHHHHHHHHHHHHHHc---C--CCCeEEEeC------------------------CCCCCHHHHHHHH-HHHHhhCCCE
Confidence 122334444444444 6 589999999 4678999999875 5689999999
Q ss_pred EECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEe
Q 013317 300 IEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMA 379 (445)
Q Consensus 300 iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~ 379 (445)
||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++
T Consensus 251 iEqP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 327 (418)
T 3r4e_A 251 LEDCTPAENQEAFRLVRQHTV--TPLAVGEIF-NTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGC 327 (418)
T ss_dssp EESCSCCSSGGGGHHHHHHCC--SCEEECTTC-CSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEE
T ss_pred EECCCCccCHHHHHHHHhcCC--CCEEEcCCc-CCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEee
Confidence 999999999999999999998 999999985 67999999999999999999999999999999999999999999876
Q ss_pred cCCCCCChhHH--HHHHHhhh
Q 013317 380 SHRSGETEDTF--IADLSVGL 398 (445)
Q Consensus 380 ~~~~~et~~~~--~~~la~a~ 398 (445)
+++..++.++. .+||+.++
T Consensus 328 h~~~~~s~ig~aA~~hlaaa~ 348 (418)
T 3r4e_A 328 HGPTDLSPVTMGCALHFDTWV 348 (418)
T ss_dssp CCCTTSCHHHHHHHHHHHHHC
T ss_pred cCCCCccHHHHHHHHHHHHhC
Confidence 66433676654 45665554
No 24
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.1e-48 Score=393.24 Aligned_cols=304 Identities=19% Similarity=0.227 Sum_probs=237.0
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEec-cCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAV-PSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~-~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
|||++|+++.+. .+.+ +..++|+|+||+|++|||++ +.+ ++.|.+++..++..
T Consensus 6 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~--------------~~~~~~e~~~~~~~ 71 (383)
T 3i4k_A 6 LTIQKVESRILDVPLIRPHGFATTTSTEQHILLVSVHLENGVIGYGEGVVPG--------------GPWWGGESVETMKA 71 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCSS--------------STTTTSCCHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEecceEEEeeeEEEEEEEECCCCEEEEecccCC--------------CCccCCCCHHHHHH
Confidence 799999998773 3433 35699999999999999954 332 12366777888888
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
.|++.++|.|+|+||.+++++|+.|++.+.+ ..+|++|||+||||+.||.+|+|||+||| |..++
T Consensus 72 ~i~~~l~p~l~G~d~~~~~~~~~~l~~~~~~------------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~ 136 (383)
T 3i4k_A 72 LVDGYLAPVLIGRAVSELAGIMADLERVVAR------------ARYAKAAVDVAMHDAWARSLNVPVRDLLG---GTVRD 136 (383)
T ss_dssp HHHHTTHHHHTTSBGGGHHHHHHHHHHHCCS------------CHHHHHHHHHHHHHHHHHHTTSBGGGGTT---CCSCS
T ss_pred HHHhhhhHHHcCCCccCHHHHHHHHHHHhcC------------CHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCC
Confidence 8988899999999999999999999843321 24799999999999999999999999999 98778
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE 227 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 227 (445)
++|++ .+++.+ + +++.++++.+...+ ||+++ |.|+|. .+ ..+
T Consensus 137 ~v~~~--~t~~~~-------~---------~~~~~~~a~~~~~~~G~~~~----K~Kvg~------------~~---~~~ 179 (383)
T 3i4k_A 137 KVDVT--WALGVL-------P---------LDVAVAEIEERIEEFGNRSF----KLKMGA------------GD---PAE 179 (383)
T ss_dssp EEEBC--EEECSC-------C---------HHHHHHHHHHHHHHHCCSEE----EEECCS------------SC---HHH
T ss_pred eEEEe--EEeeCC-------C---------HHHHHHHHHHHHHhcCCcEE----EEeeCC------------CC---HHH
Confidence 88874 333211 0 12334556555555 67655 456552 11 233
Q ss_pred HHHHHHHHHHh-cCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCc
Q 013317 228 GFELLKTAIAK-GGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQ 306 (445)
Q Consensus 228 ~l~~v~~ai~~-~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~ 306 (445)
.++.+ +++|+ +| +++.|++|+ |++||.++++++. +.++++++.|||||+++
T Consensus 180 d~~~v-~avR~a~g--~~~~l~vDa------------------------n~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~ 231 (383)
T 3i4k_A 180 DTRRV-AELAREVG--DRVSLRIDI------------------------NARWDRRTALHYL-PILAEAGVELFEQPTPA 231 (383)
T ss_dssp HHHHH-HHHHHTTT--TTSEEEEEC------------------------TTCSCHHHHHHHH-HHHHHTTCCEEESCSCT
T ss_pred HHHHH-HHHHHHcC--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCCh
Confidence 44444 33443 45 579999999 4678999999875 56899999999999999
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ +||++||+. +++++++++++.+++|++|||++++||||++++++++|+++|++++++|+ .|+
T Consensus 232 ~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es 307 (383)
T 3i4k_A 232 DDLETLREITRRTN--VSVMADESV-WTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGATS-LEG 307 (383)
T ss_dssp TCHHHHHHHHHHHC--CEEEESTTC-SSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECCS-CCC
T ss_pred hhHHHHHHHHhhCC--CCEEecCcc-CCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCCC-Ccc
Confidence 99999999999998 999999984 67999999999999999999999999999999999999999999988884 688
Q ss_pred hhHHHHHHHhhhcCCcc
Q 013317 387 EDTFIADLSVGLATGQI 403 (445)
Q Consensus 387 ~~~~~~~la~a~~~~~~ 403 (445)
.++..+.++++...+++
T Consensus 308 ~i~~aa~~hlaaa~p~~ 324 (383)
T 3i4k_A 308 PIGTAASLQFAASTKAI 324 (383)
T ss_dssp HHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 77655544444333433
No 25
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=100.00 E-value=1.5e-48 Score=394.40 Aligned_cols=297 Identities=20% Similarity=0.245 Sum_probs=231.0
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||||++|+++.+. ++.+ +..++|+|+||+|++|||+++.. +.|++++..++..
T Consensus 2 ~MkI~~i~~~~~~~Pl~~p~~~a~~~~~~~~~~~V~v~td~G~~G~Ge~~~~---------------~~~~get~~~~~~ 66 (379)
T 3r0u_A 2 VSKIIDIKTSIIKIPLKRTFITAVRSTNHIDSLAVELTLDNGVKGYGVAPAT---------------TAITGDTLQGMQY 66 (379)
T ss_dssp CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECC---------------HHHHCCCHHHHHH
T ss_pred CCEEEEEEEEEEEeecCCceEccCceEEEeEEEEEEEEECCCCEEEEEEECC---------------CCccCCCHHHHHH
Confidence 5899999998662 3444 35699999999999999965431 1255666777777
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
.|++.++|.|+|+||.+++++|+.|.+.+. ...+|++|||+||||+.||.+|+|||+||| |. ++
T Consensus 67 ~i~~~l~p~l~G~d~~~~~~~~~~~~~~~~------------~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~-r~ 130 (379)
T 3r0u_A 67 IIREIFAPVILGSDLSDYKQTLELAFKKVM------------FNSAAKMAIDLAYHDLLAKEQDISVAKLLG---AK-AN 130 (379)
T ss_dssp HHHHTTHHHHTTCBGGGHHHHHHHHHTTCS------------SCHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC-CC
T ss_pred HHHHHhHHHhcCCCcccHHHHHHHHHHhcc------------cchHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CC
Confidence 888889999999999999999999883221 125799999999999999999999999999 86 67
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
++|++ .+++.+ + +++.++++.+...+||+.+ |.|+|. +.+.+.+.
T Consensus 131 ~v~~y--~t~g~~-------~---------~e~~~~~a~~~~~~Gf~~~----KlK~g~-------------~~~~d~~~ 175 (379)
T 3r0u_A 131 SIVTD--VSISCG-------N---------VAETIQNIQNGVEANFTAI----KVKTGA-------------DFNRDIQL 175 (379)
T ss_dssp EEEBC--EEECCC-------C---------HHHHHHHHHHHHHTTCCEE----EEECSS-------------CHHHHHHH
T ss_pred eEEEE--EEecCC-------C---------HHHHHHHHHHHHHcCCCEE----eeecCC-------------CHHHHHHH
Confidence 77764 333111 0 1223455555555567654 345441 12233444
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhc--CCeeEEECCCCc
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD--HPIVSIEDPFDQ 306 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~--~~i~~iEdP~~~ 306 (445)
+++||++ +| +++.|++|+ |++||.++++++. +.+++ +++.|||||+++
T Consensus 176 v~avR~a---~g--~~~~L~vDa------------------------N~~w~~~~A~~~~-~~l~~~~~~l~~iEeP~~~ 225 (379)
T 3r0u_A 176 LKALDNE---FS--KNIKFRFDA------------------------NQGWNLAQTKQFI-EEINKYSLNVEIIEQPVKY 225 (379)
T ss_dssp HHHHHHH---CC--TTSEEEEEC------------------------TTCCCHHHHHHHH-HHHHTSCCCEEEEECCSCT
T ss_pred HHHHHHh---cC--CCCeEEEeC------------------------CCCcCHHHHHHHH-HHHhhcCCCcEEEECCCCc
Confidence 4444443 45 579999999 5678999999874 56899 889999999999
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ +||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|+++++++ +.|+
T Consensus 226 ~d~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~-~~es 301 (379)
T 3r0u_A 226 YDIKAMAEITKFSN--IPVVADES-VFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAGISCMVGC-MMES 301 (379)
T ss_dssp TCHHHHHHHHHHCS--SCEEESTT-CSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCC
T ss_pred ccHHHHHHHHhcCC--CCEEeCCc-cCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEeC-CCcc
Confidence 99999999999998 99999998 47799999999999999999999999999999999999999999998766 5788
Q ss_pred hhH--HHHHHHhh
Q 013317 387 EDT--FIADLSVG 397 (445)
Q Consensus 387 ~~~--~~~~la~a 397 (445)
.++ +++|||++
T Consensus 302 ~i~~aa~~hlaaa 314 (379)
T 3r0u_A 302 PAGILATASFALA 314 (379)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 765 45566665
No 26
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=100.00 E-value=1.7e-48 Score=397.22 Aligned_cols=311 Identities=17% Similarity=0.220 Sum_probs=230.5
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGK 81 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 81 (445)
||||+|++..+.. .+...++|+|+||+|++|||++... +. ..+....|++.|+|.|+|+
T Consensus 6 mkIt~v~~~~~~~-~~~~~~~V~v~td~G~~G~GE~~~~-----------------~~---~~~~~~~i~~~l~p~liG~ 64 (401)
T 3sbf_A 6 TIISDIHCIITKP-DRHNLITVVVETNEGVTGFGCATFQ-----------------QR---PLAVKTMVDEYLKPILIGK 64 (401)
T ss_dssp CBEEEEEEEEECS-SSSCEEEEEEEETTSCEEEEECCCT-----------------TS---HHHHHHHHHHTHHHHHTTS
T ss_pred eEEEEEEEEEEcC-CCceEEEEEEEeCCCCEEEEccccC-----------------CC---HHHHHHHHHHHHHHHHcCC
Confidence 7999999987732 1236899999999999999965321 11 2344556777899999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCC
Q 013317 82 DPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGG 161 (445)
Q Consensus 82 d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg 161 (445)
||.+++++|+.|++... |+++.+..+|+|||||||||+.||.+|+|||+||| |+.++++|+ |+++++.
T Consensus 65 d~~~~e~~~~~~~~~~~-------~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~~ 132 (401)
T 3sbf_A 65 NANNIEDLWQMMMVNAY-------WRNGPVINNAISGVDMALWDIKAKLAGMPLHQLFG---GKSRDAIPV--YTHATSD 132 (401)
T ss_dssp BTTCHHHHHHHHHHTTS-------SCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSSSSEEE--EEEEEES
T ss_pred ChhhHHHHHHHHHHhcc-------cCCCcHHHHHHHHHHHHHHHHhHhHhCCcHHHHhC---CCcCCeeeE--EEeCCCC
Confidence 99999999999983211 22334446899999999999999999999999999 987888877 4433221
Q ss_pred ccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccC--------CCCCCCCC---ccCchHHHH
Q 013317 162 SHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVG--------DEGGFAPN---IQESYEGFE 230 (445)
Q Consensus 162 ~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~--------~~g~~~~~---~~~~~~~l~ 230 (445)
+ +++..+++.+...+||+++ |.|+|....... ..|.+... ++.+.+.++
T Consensus 133 -------~---------~e~~~~~a~~~~~~G~~~~----K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~ 192 (401)
T 3sbf_A 133 -------T---------MEGIYDLVEGFLEKGYKHI----RCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFK 192 (401)
T ss_dssp -------S---------HHHHHHHHHHHHHTTCCEE----EEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHH
T ss_pred -------C---------HHHHHHHHHHHHHcCCCEE----EEeeccCCcccccccccccccccccccchHHHHHHHHHHH
Confidence 1 1233456666666678765 456664211000 00100000 112234444
Q ss_pred HHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHH
Q 013317 231 LLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~ 310 (445)
+||+++ | +++.|++|+ |++||.++++++. +.++++++.|||||++++|++
T Consensus 193 avR~a~---G--~d~~l~vDa------------------------n~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~~~~~ 242 (401)
T 3sbf_A 193 SLREKY---G--NQFHILHDV------------------------HERLFPNQAIQFA-KEVEQYKPYFIEDILPPNQTE 242 (401)
T ss_dssp HHHHHH---T--TSSEEEEEC------------------------TTCSCHHHHHHHH-HHHGGGCCSCEECSSCTTCGG
T ss_pred HHHHHc---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCChhHHH
Confidence 444444 5 579999999 4678999999975 568999999999999999999
Q ss_pred HHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHH
Q 013317 311 HYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTF 390 (445)
Q Consensus 311 ~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~ 390 (445)
++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++++..+|.++.
T Consensus 243 ~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~~~s~i~~ 319 (401)
T 3sbf_A 243 WLDNIRSQSS--VSLGLGELF-NNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAPDMTPIGA 319 (401)
T ss_dssp GHHHHHTTCC--CCEEECTTC-CSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCTTSCHHHH
T ss_pred HHHHHHhhCC--CCEEeCCcc-CCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCcccchHHH
Confidence 9999999988 999999984 6799999999999999999999999999999999999999999986555433676665
Q ss_pred --HHHHHhhh
Q 013317 391 --IADLSVGL 398 (445)
Q Consensus 391 --~~~la~a~ 398 (445)
.+||+.++
T Consensus 320 aA~~hlaaa~ 329 (401)
T 3sbf_A 320 AVNTHLNVHL 329 (401)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhC
Confidence 45555554
No 27
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=100.00 E-value=3.1e-48 Score=393.83 Aligned_cols=311 Identities=16% Similarity=0.224 Sum_probs=231.3
Q ss_pred cceeEEEEEEEecCC----CCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhh
Q 013317 2 VTINAVKARQIFDSR----GNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPA 77 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~----g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~ 77 (445)
|||++|+++.+.-.. .++.++|+|+||+|++|||++.. +++..++...+.+.|+|.
T Consensus 3 MkI~~i~~~~~~~p~~~~~~~~~~~V~v~td~G~~G~GE~~~--------------------~~~~~~~~~~~~~~l~p~ 62 (393)
T 4dwd_A 3 LKIAKVEALSVAMGDGTGWMPTSAFVRITAEDGTVGWGEASP--------------------MLGGIASLGVVARDIAPF 62 (393)
T ss_dssp CBEEEEEEEEEECCC-----CEEEEEEEEETTSCEEEEEECC--------------------GGGGHHHHHHHHHHTHHH
T ss_pred CEEEEEEEEEEcCCCcccccceEEEEEEEECCCCEEEEEccC--------------------cHHHHHHHHHHHHHHHHH
Confidence 899999999885331 14579999999999999997652 112344433334559999
Q ss_pred ccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEe
Q 013317 78 LVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNV 157 (445)
Q Consensus 78 LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~ 157 (445)
|+|+||.+++++|+.|++.+... |++++..+|++|||+||||+.||.+|+|||+||| |..++++|+ |.+
T Consensus 63 liG~d~~~~e~~~~~l~~~~~~~------g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~~r~~v~~--y~s 131 (393)
T 4dwd_A 63 LEGQEVLDHAVLLDRMMHRLVKL------GPEGIATAALAACDIALWDLKGKLLGQPIYKLLG---GAWRTRLPC--YSS 131 (393)
T ss_dssp HTTSBGGGHHHHHHHHHHHTGGG------CCTTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEE--EEE
T ss_pred HCCCCcccHHHHHHHHHHHHHhc------CCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCceee--EEe
Confidence 99999999999999998443321 2334556899999999999999999999999999 987777776 554
Q ss_pred ecCCccCCCcccccceeeccCCcccHHHH-HHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHH
Q 013317 158 INGGSHADNKLAMQEFMILPIGASTFKEA-MKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAI 236 (445)
Q Consensus 158 ~~gg~~~~~~~~~~e~~~~p~~~~~~~ea-~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai 236 (445)
+.|+.. + .+++..+++ .+...+||+++ |.|+|..... ...+.+.+.+.+++||+++
T Consensus 132 ~~g~~~-----~--------~~e~~~~~a~~~~~~~G~~~~----KlKvG~~~~~------~~~~~~~d~~~v~avR~a~ 188 (393)
T 4dwd_A 132 IGGNAA-----R--------SVDEVVREVARRVEAEQPAAV----KIRWDGDRTR------CDVDIPGDIAKARAVRELL 188 (393)
T ss_dssp ECCCSS-----S--------CHHHHHHHHHHHHHHHCCSEE----EEECCCCTTC------CSCCHHHHHHHHHHHHHHH
T ss_pred cCccCC-----C--------CHHHHHHHHHHHHHHcCCCEE----EEccCCCCcc------cccCHHHHHHHHHHHHHHh
Confidence 422211 0 012334555 55556677665 4566531100 0112333444555554444
Q ss_pred HhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHH
Q 013317 237 AKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELT 316 (445)
Q Consensus 237 ~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~ 316 (445)
| +++.|++|+ |++||.++++++. +.++++++.|||||++++|++++++|+
T Consensus 189 ---g--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~~d~~~~~~l~ 238 (393)
T 4dwd_A 189 ---G--PDAVIGFDA------------------------NNGYSVGGAIRVG-RALEDLGYSWFEEPVQHYHVGAMGEVA 238 (393)
T ss_dssp ---C--TTCCEEEEC------------------------TTCCCHHHHHHHH-HHHHHTTCSEEECCSCTTCHHHHHHHH
T ss_pred ---C--CCCeEEEEC------------------------CCCCCHHHHHHHH-HHHHhhCCCEEECCCCcccHHHHHHHH
Confidence 5 579999999 4678999999875 568999999999999999999999999
Q ss_pred HHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHh
Q 013317 317 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSV 396 (445)
Q Consensus 317 ~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~ 396 (445)
++++ +||++||+. .++++++++++.+ +|++|+|++++||||++++++++|+++|+++++++ + ++.++.++++++
T Consensus 239 ~~~~--iPIa~dE~~-~~~~~~~~~i~~~-~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~-~-~~~i~~aa~~hl 312 (393)
T 4dwd_A 239 QRLD--ITVSAGEQT-YTLQALKDLILSG-VRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQ-T-QPGVGHFANIHV 312 (393)
T ss_dssp HHCS--SEEEBCTTC-CSHHHHHHHHHHT-CCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCC-C-CSSHHHHHHHHH
T ss_pred hhCC--CCEEecCCc-CCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecC-C-CcHHHHHHHHHH
Confidence 9998 999999985 6799999999999 99999999999999999999999999999987555 4 677665555544
Q ss_pred hhcCCc
Q 013317 397 GLATGQ 402 (445)
Q Consensus 397 a~~~~~ 402 (445)
+...+.
T Consensus 313 aaa~p~ 318 (393)
T 4dwd_A 313 LSTLMH 318 (393)
T ss_dssp HHTCTT
T ss_pred HHhCCC
Confidence 433333
No 28
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=100.00 E-value=3.4e-48 Score=393.10 Aligned_cols=303 Identities=16% Similarity=0.177 Sum_probs=232.3
Q ss_pred CcceeEEEEEEEe--------cCCC-----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG-----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAV 67 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g-----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~ 67 (445)
||||++|+++.+. ++.+ +..++|+|+||+|++|||++.... .|. ++..++.
T Consensus 7 ~mkI~~i~~~~~~~Pl~~p~~~s~g~~~~~~~~~~V~v~td~G~~G~GE~~~~~---------------~~~-e~~~~~~ 70 (385)
T 3i6e_A 7 EQKIIAMDLWHLALPVVSARDHGIGRVEGSCEIVVLRLVAEGGAEGFGEASPWA---------------VFT-GTPEASY 70 (385)
T ss_dssp CSBEEEEEEEEEECCC--------------CEEEEEEEEETTSCEEEEEECCCT---------------TTT-CCHHHHH
T ss_pred hcEEEEEEEEEEecccCCCeeccCcEEeceeeEEEEEEEECCCCEEEEeeccCC---------------CcC-CCHHHHH
Confidence 6899999998883 2322 246999999999999999543211 022 4567777
Q ss_pred HHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 68 QNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
..|++.++|.|+|+||.+++++|+.|++.+.+ ..+|++|||+||||+.||.+|+|||+||| |..+
T Consensus 71 ~~i~~~l~p~l~G~d~~~~~~~~~~l~~~~~~------------~~~A~said~ALwDl~gk~~g~Pl~~LLG---g~~r 135 (385)
T 3i6e_A 71 AALDRYLRPLVIGRRVGDRVAIMDEAARAVAH------------CTEAKAALDSALLDLAGRISNLPVWALLG---GKCR 135 (385)
T ss_dssp HHHHHTTHHHHTTCBGGGHHHHHHHHHHHSSS------------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSC
T ss_pred HHHHHHHHHHHCCCCccCHHHHHHHHHHHhcC------------CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---cccC
Confidence 78888899999999999999999999843321 24799999999999999999999999999 9877
Q ss_pred ceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE 227 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 227 (445)
+++|+ |.+++.+ ..++.++++.+...+||+++ |.|+|. .+.+.+.+
T Consensus 136 ~~v~~--~~t~~~~----------------~~~~~~~~a~~~~~~G~~~~----K~Kvg~------------~~~~~d~~ 181 (385)
T 3i6e_A 136 DTIPL--SCSIANP----------------DFDADIALMERLRADGVGLI----KLKTGF------------RDHAFDIM 181 (385)
T ss_dssp SEEEB--EEEECCS----------------SHHHHHHHHHHHHHHTCCEE----EEECSS------------SCHHHHHH
T ss_pred CceEE--EEEcCCC----------------CHHHHHHHHHHHHHcCCCEE----EEecCC------------CCHHHHHH
Confidence 78876 4333211 01223455555555677655 355542 11223344
Q ss_pred HHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCcc
Q 013317 228 GFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~ 307 (445)
.+++||+++ +++.|++|+ |++||.+++++++ +.++++++.|||||++++
T Consensus 182 ~v~avR~a~------~~~~l~vDa------------------------n~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~~ 230 (385)
T 3i6e_A 182 RLELIARDF------PEFRVRVDY------------------------NQGLEIDEAVPRV-LDVAQFQPDFIEQPVRAH 230 (385)
T ss_dssp HHHHHHHHC------TTSEEEEEC------------------------TTCCCGGGHHHHH-HHHHTTCCSCEECCSCTT
T ss_pred HHHHHHHhC------CCCeEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCCcc
Confidence 454444443 578999999 4678889999875 567999999999999999
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.|+.
T Consensus 231 d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~ 306 (385)
T 3i6e_A 231 HFELMARLRGLTD--VPLLADESV-YGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGD-MFEAG 306 (385)
T ss_dssp CHHHHHHHHTTCS--SCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCH
T ss_pred cHHHHHHHHHhCC--CCEEEeCCc-CCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeCC-CCccH
Confidence 9999999999988 999999984 6799999999999999999999999999999999999999999998776 57888
Q ss_pred hHHHHHHHhhhcCCcc
Q 013317 388 DTFIADLSVGLATGQI 403 (445)
Q Consensus 388 ~~~~~~la~a~~~~~~ 403 (445)
++..+.++++...+++
T Consensus 307 i~~aa~~hlaaa~~~~ 322 (385)
T 3i6e_A 307 LAHLAGTHMIAATPEI 322 (385)
T ss_dssp HHHHHHHHHHHTCTTE
T ss_pred HHHHHHHHHHHhCCCC
Confidence 7765555444444443
No 29
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=100.00 E-value=3e-48 Score=398.90 Aligned_cols=311 Identities=15% Similarity=0.187 Sum_probs=230.6
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCC-CcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSD-GTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~-G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
||||+|++..+. ..+...++|+|+||+ |++|||++... +. ..++...|++.|+|.|+|
T Consensus 27 mkIt~v~~~~~~-~~~~~~v~V~v~Td~~Gi~G~GE~~~~-----------------~~---~~~~~~~i~~~l~p~LiG 85 (440)
T 3t6c_A 27 LFITNVKTILTA-PGGIDLVVVKIETNEPGLYGLGCATFT-----------------QR---IYAVQSAIDEYLAPFLIG 85 (440)
T ss_dssp CCEEEEEEEEEC-TTSSCEEEEEEEESSTTCEEEEECCCG-----------------GG---HHHHHHHHHTTHHHHHTT
T ss_pred CEEEEEEEEEEC-CCCceEEEEEEEEcCCCCEEEEeeccC-----------------CC---HHHHHHHHHHHHHHHHcC
Confidence 799999988763 222267999999999 99999965321 11 234455677779999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecC
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVING 160 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~g 160 (445)
+||.+++++|+.|++.. +|+++.+..+|+||||+||||+.||.+|+|||+||| |+.++++|+ |.++++
T Consensus 86 ~dp~~ie~i~~~~~~~~-------~~~~g~~~~~A~saID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~ 153 (440)
T 3t6c_A 86 KDPARIEDIWQSAAVSG-------YWRNGPVMNNALSGIDMALWDIKGKQAGLPVYELLG---GKCRDGIAL--YVHTDG 153 (440)
T ss_dssp CCTTCHHHHHHHHHHTT-------SCCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSSEEE--EEEECC
T ss_pred CChhhHHHHHHHHHHhc-------ccCCCcchhhHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCeeEE--EEECCC
Confidence 99999999999998321 122334446899999999999999999999999999 988888876 443322
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCc-----------ccCCCCCCC---------C
Q 013317 161 GSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDAT-----------NVGDEGGFA---------P 220 (445)
Q Consensus 161 g~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~-----------~~~~~g~~~---------~ 220 (445)
. + +++..+++.+...+||+++ |.|+|.... ++..+.++. +
T Consensus 154 ~-------~---------~e~~~~~a~~~~~~Gf~~~----K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (440)
T 3t6c_A 154 A-------D---------EVEVEDSARAKMEEGYQYI----RCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAP 213 (440)
T ss_dssp S-------S---------HHHHHHHHHHHHHTTCSEE----EECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCS
T ss_pred C-------C---------HHHHHHHHHHHHHcCCCEE----EEeeccCCccccccccccccccccccccccccccccccc
Confidence 1 1 1233456666666778766 456553210 000000000 0
Q ss_pred C--------ccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhh
Q 013317 221 N--------IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI 292 (445)
Q Consensus 221 ~--------~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~ 292 (445)
. ++.+.+.+++||+++ | +++.|++|+ |++||.++++++. +.+
T Consensus 214 ~~~~~~~~~~~~d~~~v~avR~a~---G--~d~~L~vDa------------------------N~~~~~~~A~~~~-~~L 263 (440)
T 3t6c_A 214 GIYFDPEAYAKSIPRLFDHLRNKL---G--FSVELLHDA------------------------HERITPINAIHMA-KAL 263 (440)
T ss_dssp SEECCHHHHHHHHHHHHHHHHHHH---C--SSSEEEEEC------------------------TTCSCHHHHHHHH-HHT
T ss_pred cccccchhhHHHHHHHHHHHHHhc---C--CCCeEEEEC------------------------CCCCCHHHHHHHH-HHh
Confidence 0 112234444444444 5 589999999 4678999999875 567
Q ss_pred hcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHH
Q 013317 293 SDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKR 372 (445)
Q Consensus 293 ~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~ 372 (445)
+++++.|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|++
T Consensus 264 ~~~~i~~iEeP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~ 340 (440)
T 3t6c_A 264 EPYQLFFLEDPVAPENTEWLKMLRQQSS--TPIAMGELF-VNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSEL 340 (440)
T ss_dssp GGGCCSEEECSSCGGGGGGHHHHHHHCC--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHH
T ss_pred hhcCCCEEECCCChhhHHHHHHHHhhcC--CCEEeCccc-CCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 999999985 6799999999999999999999999999999999999999
Q ss_pred cCCcEEecCCCCCChhHH--HHHHHhhh
Q 013317 373 AGWGVMASHRSGETEDTF--IADLSVGL 398 (445)
Q Consensus 373 ~g~~~~~~~~~~et~~~~--~~~la~a~ 398 (445)
+|++++++++..+|.++. .+||+.++
T Consensus 341 ~gi~~~~h~~~~~s~Ig~aa~~hlaaa~ 368 (440)
T 3t6c_A 341 NGVRTAWHSPGDISPIGVCANMHLDLSS 368 (440)
T ss_dssp TTCEECCCCSSSSCHHHHHHHHHHHHHC
T ss_pred cCCEEEeccCCCccHHHHHHHHHHHHhC
Confidence 999986555434777664 45555554
No 30
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=100.00 E-value=4.7e-48 Score=391.72 Aligned_cols=303 Identities=15% Similarity=0.189 Sum_probs=228.0
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +..++|+|+||+|++|||++... ......
T Consensus 1 MKIt~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~i~td~G~~G~GE~~~~-----------------------~~~~~~ 57 (378)
T 4hpn_A 1 MKITAVRTHLLEHRLDTPFESASMRFDRRAHVLVEIECDDGTVGWGECLGP-----------------------ARPNAA 57 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECSC-----------------------HHHHHH
T ss_pred CEEEEEEEEEEeccCCCCeECCCEEEEEEEEEEEEEEECCCCEEEEEecCC-----------------------cchHHH
Confidence 699999998762 3444 35699999999999999965431 111234
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+.+.++|.|+|+||.+++++|+.|.+.+.. .+..++..+|++|||+||||+.||.+|+|||+||| |+.++.
T Consensus 58 ~~~~~~~~liG~d~~~~e~~~~~l~~~~~~------~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLG---g~~~~~ 128 (378)
T 4hpn_A 58 VVQAYSGWLIGQDPRQTEKIWAVLYNALRD------QGQRGLSLTALSGIDIALWDIKGKHYGASISMLLG---GRWRES 128 (378)
T ss_dssp HHHHHHTTTTTSCTTCHHHHHHHHHHHTCT------TCSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSE
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHhhh------cccccchHHHHHHHHHHHHHHhhhhccCccccccC---CccccC
Confidence 567899999999999999999999844332 12344556899999999999999999999999999 988887
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|+ |++ ++.... +..+ ..+..+++.+...+||+++ |.|+|. +.+.+.+.+
T Consensus 129 ~~~--y~~--~~~~~~---~~~~------~~~~~~~~~~~~~~Gf~~~----K~k~g~-------------~~~~di~~v 178 (378)
T 4hpn_A 129 VRA--YAT--GSFKRD---NVDR------VSDNASEMAERRAEGFHAC----KIKIGF-------------GVEEDLRVI 178 (378)
T ss_dssp EEE--EEE--CCCBCT---TCCH------HHHHHHHHHHHHHTTCSEE----EEECCS-------------CHHHHHHHH
T ss_pred cce--eee--eccccc---cchh------HHHHHHHHHHHHHhcccee----cccccC-------------ChHHHHHHH
Confidence 776 443 221110 0100 1122344444444555543 334331 123334555
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCH
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~ 309 (445)
+.+|+++ | +++.|+||+ |+.||.+++++++ +.++++++.|||||++++|+
T Consensus 179 ~avr~~~---g--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~d~ 228 (378)
T 4hpn_A 179 AAVREAI---G--PDMRLMIDA------------------------NHGYTVTEAITLG-DRAAGFGIDWFEEPVVPEQL 228 (378)
T ss_dssp HHHHHHH---T--TTSEEEEEC------------------------TTCCCHHHHHHHH-HHHGGGCCSCEECCSCTTCH
T ss_pred HHHHHhc---C--CcEEEEEec------------------------CcccCHHHHHHHH-hhhhhcccchhhcCCCccch
Confidence 5555554 5 589999999 5778999999985 45899999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhH
Q 013317 310 EHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++ ++|+ .++..+
T Consensus 229 ~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~v-~~h~-~~~~i~ 303 (378)
T 4hpn_A 229 DAYARVRAGQP--IPVAGGETW-HGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRI-VPHV-WGTGVQ 303 (378)
T ss_dssp HHHHHHHHHSS--SCEEECTTC-CHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHHTCEE-CCBC-CSSHHH
T ss_pred hhhHHHHhhCC--ceeeCCcCc-cchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHHHcCCeE-EeCC-CCcHHH
Confidence 99999999998 999999985 669999999999999999999999999999999999999999996 6885 466554
Q ss_pred --HHHHHHhhhcCC
Q 013317 390 --FIADLSVGLATG 401 (445)
Q Consensus 390 --~~~~la~a~~~~ 401 (445)
+.+|++.++.+.
T Consensus 304 ~aa~~h~~aa~~~~ 317 (378)
T 4hpn_A 304 IAAALQFMAAMTPD 317 (378)
T ss_dssp HHHHHHHHHHCCCS
T ss_pred HHHHHHHHHHcCcc
Confidence 556666665443
No 31
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=100.00 E-value=6.9e-48 Score=394.56 Aligned_cols=319 Identities=15% Similarity=0.196 Sum_probs=234.7
Q ss_pred CcceeEEEEEEEec--CCCCC----eEEEEEEeCCCcEEEEec-cCCCccccccceeeccCCcccCCccHHHHHHHHHHh
Q 013317 1 MVTINAVKARQIFD--SRGNP----TVEVDVSLSDGTLARAAV-PSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSI 73 (445)
Q Consensus 1 ~~~I~~v~~~~i~~--~~g~~----~v~V~V~td~G~~G~g~~-~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~ 73 (445)
.|||++|+++.+.. +.+.+ +++|+|+||+|++|||++ +.. | .+..++...|++
T Consensus 2 ~MkI~~i~~~~~~~pl~~~~~~~~~~v~V~v~td~G~~G~Ge~~~~~---g----------------~~~~~~~~~i~~- 61 (410)
T 2gl5_A 2 SLKITSIEVFDCELKKRDQTMSSYNPVLIRVNTDSGLSGIGEVGLAY---G----------------AGAKAGVGIIRD- 61 (410)
T ss_dssp CCCEEEEEEEECCGGGTCGGGTTCCCEEEEEEETTSCEEEEEESCSS---S----------------TTHHHHHHHHHH-
T ss_pred CceEEEEEEEEecccccccCcccccceEEEEEeCCCCEEEEeecCcC---C----------------CChHHHHHHHHH-
Confidence 07999999999965 22122 579999999999999976 541 1 123445566776
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeee
Q 013317 74 IGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVP 153 (445)
Q Consensus 74 l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p 153 (445)
|+|.|+|+||.+++++|+.|. .... |..+++++..+|++||||||||+.||.+|+|||+||| |..++++|+
T Consensus 62 l~p~liG~d~~~~~~i~~~l~-~~~~----~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~vp~- 132 (410)
T 2gl5_A 62 LAPLIVGEDPLNIEKIWEFFF-RKTF----WGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLG---GKTNEKLRT- 132 (410)
T ss_dssp HGGGTTTSCTTCHHHHHHHHH-HSSS----GGGSCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---SCSCSSEEE-
T ss_pred HHHHhCCCChHHHHHHHHHHH-Hhcc----cccCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCccCceeE-
Confidence 999999999999999999998 3220 1112345567899999999999999999999999999 976666554
Q ss_pred eEEe-ec-C-CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhc------CCC----CcccCCCCCCCC
Q 013317 154 AFNV-IN-G-GSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKY------GQD----ATNVGDEGGFAP 220 (445)
Q Consensus 154 ~~~~-~~-g-g~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~------G~~----~~~~~~~g~~~~ 220 (445)
|++ ++ | +.|+.+..+.++ .++++.+...++|+.+| .|. |.. ..+. ..||+.+
T Consensus 133 -y~~~i~~g~~~~~~~~~~~~~---------~~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~~~~~~~~~-~~GG~~~ 197 (410)
T 2gl5_A 133 -YASQLQFGWGDKNHILVTPEE---------YAEAARAALDDGYDAIK----VDPLEIDRNGDDCVFQNRNR-NYSGLLL 197 (410)
T ss_dssp -EEECGGGCCTTCCSCCCSHHH---------HHHHHHHHHHTTCSEEE----ECSSSBCTTSCBTTTSSCCG-GGGSCCC
T ss_pred -eEecccCCccccccccCCHHH---------HHHHHHHHHHcCCCEEE----EeccccCCcccccccccccc-cccCccc
Confidence 665 55 4 444433322222 34566666666777664 332 210 0000 1333332
Q ss_pred --CccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCee
Q 013317 221 --NIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIV 298 (445)
Q Consensus 221 --~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~ 298 (445)
+.+.+.+.++.||+++ | +++.|++|+ |++||.+++++++. .+++|++.
T Consensus 198 ~~~~~~~~e~v~avR~a~---G--~d~~l~vDa------------------------n~~~~~~~ai~~~~-~l~~~~i~ 247 (410)
T 2gl5_A 198 ADQLKMGEARIAAMREAM---G--DDADIIVEI------------------------HSLLGTNSAIQFAK-AIEKYRIF 247 (410)
T ss_dssp HHHHHHHHHHHHHHHHHH---C--SSSEEEEEC------------------------TTCSCHHHHHHHHH-HHGGGCEE
T ss_pred hhHHHHHHHHHHHHHHhc---C--CCCEEEEEC------------------------CCCCCHHHHHHHHH-HHHhcCCC
Confidence 2222344555555544 6 579999999 45688999999864 58999999
Q ss_pred EEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEE
Q 013317 299 SIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVM 378 (445)
Q Consensus 299 ~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~ 378 (445)
|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|++++
T Consensus 248 ~iE~P~~~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~ 324 (410)
T 2gl5_A 248 LYEEPIHPLNSDNMQKVSRSTT--IPIATGERS-YTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQ 324 (410)
T ss_dssp EEECSSCSSCHHHHHHHHHHCS--SCEEECTTC-CTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEC
T ss_pred eEECCCChhhHHHHHHHHhhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEe
Confidence 9999999999999999999998 999999985 5799999999999999999999999999999999999999999987
Q ss_pred ecCCCCCChhHHH--HHHHhhh
Q 013317 379 ASHRSGETEDTFI--ADLSVGL 398 (445)
Q Consensus 379 ~~~~~~et~~~~~--~~la~a~ 398 (445)
+++ + ++.++.. +||+.++
T Consensus 325 ~h~-~-~s~i~~aa~~hlaaa~ 344 (410)
T 2gl5_A 325 VHV-C-GGPVSTVAALHMETAI 344 (410)
T ss_dssp CCC-C-SSHHHHHHHHHHHHHC
T ss_pred ecC-C-CCHHHHHHHHHHHHhC
Confidence 654 4 4776654 5655554
No 32
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=100.00 E-value=5.2e-48 Score=394.86 Aligned_cols=282 Identities=11% Similarity=0.146 Sum_probs=214.1
Q ss_pred eEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhcc
Q 013317 20 TVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDG 99 (445)
Q Consensus 20 ~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~ 99 (445)
+|+|||+||+|++|||++.... +.....+.|++.|+|.|+|+||.+++.+|+.|.+.+..
T Consensus 75 ~VlVri~td~G~~G~GE~~~~~--------------------~~~~~~~~i~~~lap~liG~dp~~~~~i~~~l~~~~~~ 134 (412)
T 4h1z_A 75 SVLVRIETENGAVGWGETYGLV--------------------APRATMEIIDDLLADFTIGRDPFDAAAIHDDLYDLMRV 134 (412)
T ss_dssp EEEEEEEETTCCEEEEEEECSS--------------------CHHHHHHHHHHTHHHHHTTSCGGGHHHHHHHHHTTTGG
T ss_pred cEEEEEEECCCCEEEEecCCCC--------------------CHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHh
Confidence 4899999999999998653211 13445567888999999999999999999999832221
Q ss_pred CCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCCccCCCcccccceeeccCC
Q 013317 100 TVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIG 179 (445)
Q Consensus 100 ~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~ 179 (445)
.. ..+++..+|+|||||||||+.||.+|+|||+||| |..++++|+ |++ +. .. +. .
T Consensus 135 ~~-----~~~g~~~~A~saiD~ALwDl~gK~~g~Pl~~LLG---G~~~~~v~~--y~s--~~-~~----~~--------~ 189 (412)
T 4h1z_A 135 RG-----YTGGFYVDALAAIDIALWDLAGKLAGLPVCKLLG---GQRRDRIAA--YIS--GL-PE----DT--------R 189 (412)
T ss_dssp GT-----CCSHHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCCCSEEEE--EEC--CC-CC----SS--------H
T ss_pred cc-----cccchHHHHHHHHHHHHHHHHHHHcCCCHHHhcC---CCCCceEEE--Eec--cC-CC----Cc--------H
Confidence 11 0233445799999999999999999999999999 988888776 432 11 10 00 1
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccc
Q 013317 180 ASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDR 259 (445)
Q Consensus 180 ~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~ 259 (445)
++..+.+.+...+||+++| .|.|. ..+.+.+.++++|+++ | +++.|++|+
T Consensus 190 ~~~~~~a~~~~~~G~~~~K----~k~g~-------------~~~~~~~~v~~vR~~~---g--~~~~l~vDa-------- 239 (412)
T 4h1z_A 190 AKRAELAAAWQAKGFSSFK----FASPV-------------ADDGVAKEMEILRERL---G--PAVRIACDM-------- 239 (412)
T ss_dssp HHHHHHHHHHHHTTCCEEE----EEGGG-------------CTTCHHHHHHHHHHHH---C--SSSEEEEEC--------
T ss_pred HHHHHHHHHHHhcCcceec----ccccc-------------chhhHHHHHHHHHhcc---C--CeEEEEecc--------
Confidence 1223344444445665443 33321 1123456676666665 5 689999999
Q ss_pred cCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHH
Q 013317 260 KDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVE 339 (445)
Q Consensus 260 ~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~ 339 (445)
|+.||.+++++++ +.++++++.|||||++++|++++++|+++++ +||++||+. .++++++
T Consensus 240 ----------------N~~~~~~~A~~~~-~~l~~~~l~~iEqP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~ 299 (412)
T 4h1z_A 240 ----------------HWAHTASEAVALI-KAMEPHGLWFAEAPVRTEDIDGLARVAASVS--TAIAVGEEW-RTVHDMV 299 (412)
T ss_dssp ----------------CSCCCHHHHHHHH-HHHGGGCEEEEECCSCTTCHHHHHHHHHHCS--SEEEECTTC-CSHHHHH
T ss_pred ----------------ccCCCHHHHHHHH-HhhcccccceecCCCCccchHHHHHHHhhcC--CccccCCcc-cchHhHH
Confidence 5678999999985 5689999999999999999999999999998 999999985 6799999
Q ss_pred HHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHH--HHHHHhhh
Q 013317 340 KAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTF--IADLSVGL 398 (445)
Q Consensus 340 ~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~--~~~la~a~ 398 (445)
++++.+++|++|+|+++ ||||++++++++|+++|+++++++ +.++.++. .+|++.++
T Consensus 300 ~~i~~~a~div~~d~~~-GGit~~~kia~~A~~~gi~v~~h~-~~~~~i~~aa~lhl~aa~ 358 (412)
T 4h1z_A 300 PRVARRALAIVQPEMGH-KGITQFMRIGAYAHVHHIKVIPHA-TIGAGIFLAASLQASAAL 358 (412)
T ss_dssp HHHHTTCCSEECCCHHH-HHHHHHHHHHHHHHHTTCEECCCC-CSSCSHHHHHHHHHHHHC
T ss_pred HHHHcCCCCEEEecCCC-CChHHHHHHHHHHHHCCCcEEecC-CcchHHHHHHHHHHHHhC
Confidence 99999999999999986 999999999999999999986544 56776654 45555554
No 33
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=100.00 E-value=1.2e-47 Score=387.68 Aligned_cols=301 Identities=15% Similarity=0.187 Sum_probs=230.2
Q ss_pred CcceeEEEEEEEecC----C---CCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHh
Q 013317 1 MVTINAVKARQIFDS----R---GNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSI 73 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~----~---g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~ 73 (445)
||||++|+++.+... . +...++|+|+||+|++|||+.+. +...+...|++.
T Consensus 2 ~MkI~~i~~~~~~~P~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~----------------------~~~~~~~~i~~~ 59 (374)
T 3sjn_A 2 VLKITDIEVLHLRVPAMDADCEWGEDAVIVKVHTDKGIVGVGEADS----------------------SPLVVQACIEAP 59 (374)
T ss_dssp CCBEEEEEEEEEESSCTTSCCCTTSEEEEEEEEETTSCEEEEEESS----------------------CHHHHHHHHHCC
T ss_pred CcEEEEEEEEEEeccCcCCcCcccceEEEEEEEECCCCEEEEcCCC----------------------ChHHHHHHHHhh
Confidence 489999999988422 1 12238999999999999987321 234555567666
Q ss_pred --------HhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q 013317 74 --------IGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGN 145 (445)
Q Consensus 74 --------l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~ 145 (445)
++|.|+|+||.+++++|+.|++.+... +++++..+|++|||+||||+.||.+|+|||+||| |+
T Consensus 60 ~~~~~~~~l~p~liG~d~~~~~~~~~~l~~~~~~~------~~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~ 130 (374)
T 3sjn_A 60 QTNFYCNGLKRLLIGENALEIERLWNKMYWGSNYM------GRRGAGIHAISAIDIALWDIAGQFYGVPVHTLLG---GK 130 (374)
T ss_dssp CSBTTBCCHHHHHTTSBTTCHHHHHHHHHHHTTTT------CSSBHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CC
T ss_pred hccchHhHHHHHHcCCCcccHHHHHHHHHHhhhhc------CCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---CC
Confidence 999999999999999999998433321 2355667899999999999999999999999999 97
Q ss_pred CcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCc
Q 013317 146 KTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQES 225 (445)
Q Consensus 146 ~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~ 225 (445)
.++++|++ ..+ + . .+ .++...+++.+...+||+++ |.|+|.. | .+.+.+
T Consensus 131 ~r~~v~~y--~~~--~--~---~~--------~~e~~~~~a~~~~~~Gf~~i----Klk~g~~-------g---~~~~~d 179 (374)
T 3sjn_A 131 YRDKIRCY--GTF--I--P---AD--------KPEDNVAIVQGLKDQGFSSI----KFGGGVM-------G---DDPDTD 179 (374)
T ss_dssp SCSEEEEE--EEE--C--C---CS--------SGGGGHHHHHHHHTTTCSEE----EEECTTT-------T---SCHHHH
T ss_pred cCCceeEE--ecc--C--C---CC--------CHHHHHHHHHHHHHcCCCEE----EeccCCC-------C---CCHHHH
Confidence 78888874 211 1 0 00 01234556666666677665 3555521 1 112334
Q ss_pred hHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcC-hHHHHHHHHHhhhcCCeeEEECCC
Q 013317 226 YEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVS-GDGLKNVYRSFISDHPIVSIEDPF 304 (445)
Q Consensus 226 ~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t-~~~~i~~~~~~~~~~~i~~iEdP~ 304 (445)
.+.+++||+++ | +++.|++|+ |++|| .++++++. +.++++++.|||||+
T Consensus 180 ~~~v~avR~a~---g--~~~~l~vDa------------------------n~~~~d~~~A~~~~-~~l~~~~i~~iEqP~ 229 (374)
T 3sjn_A 180 YAIVKAVREAA---G--PEMEVQIDL------------------------ASKWHTCGHSAMMA-KRLEEFNLNWIEEPV 229 (374)
T ss_dssp HHHHHHHHHHH---C--SSSEEEEEC------------------------TTTTCSHHHHHHHH-HHSGGGCCSEEECSS
T ss_pred HHHHHHHHHHh---C--CCCeEEEEC------------------------CCCCCCHHHHHHHH-HHhhhcCceEEECCC
Confidence 55555555544 5 589999999 46788 99999875 568999999999999
Q ss_pred CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCC
Q 013317 305 DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSG 384 (445)
Q Consensus 305 ~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~ 384 (445)
+++|++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|+++++++ +
T Consensus 230 ~~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~-~- 304 (374)
T 3sjn_A 230 LADSLISYEKLSRQVS--QKIAGGESL-TTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIPHG-F- 304 (374)
T ss_dssp CTTCHHHHHHHHHHCS--SEEEECTTC-CHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHHTCEECCBC-C-
T ss_pred CcccHHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC-C-
Confidence 9999999999999998 999999985 6699999999999999999999999999999999999999999987655 4
Q ss_pred CChhHHHH--HHHhhh
Q 013317 385 ETEDTFIA--DLSVGL 398 (445)
Q Consensus 385 et~~~~~~--~la~a~ 398 (445)
++.++.++ ||+.++
T Consensus 305 ~~~i~~aa~~hlaaa~ 320 (374)
T 3sjn_A 305 STGILLHASVHFLAAC 320 (374)
T ss_dssp SCHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHhC
Confidence 67766544 555544
No 34
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=100.00 E-value=3.5e-48 Score=392.23 Aligned_cols=303 Identities=15% Similarity=0.165 Sum_probs=230.9
Q ss_pred CcceeEEEEEEEe--------cCCC----CC-eEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NP-TVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAV 67 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~-~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~ 67 (445)
||||++|+++.+. ++.+ +. .++|+|+||+|++|||++.... .|. ++..++.
T Consensus 5 ~~kI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~---------------~~~-e~~~~~~ 68 (377)
T 3my9_A 5 DSVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWE---------------VFT-GTPEAAF 68 (377)
T ss_dssp CCBEEEEEEEEEEECEEC----------CCEEEEEEEEEETTSCEEEEEECCC---------------------CHHHHH
T ss_pred cCEEEEEEEEEEeccccCCeeccceEEEeeeeEEEEEEEECCCCEEEEecccCC---------------CcC-CCHHHHH
Confidence 7899999998873 2333 35 7999999999999999543211 021 4466777
Q ss_pred HHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 68 QNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
..|++.++|.|+|+||.+++++|+.|++.+.+ ..+|++|||+||||+.||.+|+|||+||| |..+
T Consensus 69 ~~i~~~l~p~liG~d~~~~~~~~~~l~~~~~~------------~~~A~said~AlwDl~gk~~g~Pl~~LLG---g~~r 133 (377)
T 3my9_A 69 SALDIYLRPLILGAPIKRVRELMARMDKMLVG------------HGEAKAAVEMALLDILGKATGLSVADLLG---GRVR 133 (377)
T ss_dssp HHHHTTTHHHHTTCBTTCHHHHHHHHHHHSCS------------CHHHHHHHHHHHHHHHHHHHTCBTTGGGT---CCSC
T ss_pred HHHHHHHHHHhCCCCcCCHHHHHHHHHHHhcC------------chhHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCC
Confidence 77877799999999999999999999833321 24799999999999999999999999999 9877
Q ss_pred ceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE 227 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 227 (445)
+++|++ .+++.+ ..+..++++.+...+||+++ |.|+|. .+.+.+.+
T Consensus 134 ~~v~~~--~t~~~~----------------~~~~~~~~a~~~~~~G~~~~----K~Kvg~------------~~~~~d~~ 179 (377)
T 3my9_A 134 DRIPLS--FSIADP----------------DFDADLERMRAMVPAGHTVF----KMKTGV------------KPHAEELR 179 (377)
T ss_dssp SEEEBC--EEECCS----------------SHHHHHHHHHHHTTTTCCEE----EEECSS------------SCHHHHHH
T ss_pred CeEEEE--EecCCC----------------CHHHHHHHHHHHHHcCCCEE----EEccCC------------CcHHHHHH
Confidence 888874 332211 01223445555555566654 345542 11233455
Q ss_pred HHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCcc
Q 013317 228 GFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~ 307 (445)
.+++||+++ | +++.|++|+ |++||.++++++. +.++++++.|||||++++
T Consensus 180 ~v~avR~~~---g--~~~~l~vDa------------------------n~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~~ 229 (377)
T 3my9_A 180 ILETMRGEF---G--ERIDLRLDF------------------------NQALTPFGAMKIL-RDVDAFRPTFIEQPVPRR 229 (377)
T ss_dssp HHHHHHHHH---G--GGSEEEEEC------------------------TTCCCTTTHHHHH-HHHHTTCCSCEECCSCTT
T ss_pred HHHHHHHHh---C--CCCeEEEeC------------------------CCCcCHHHHHHHH-HHHhhcCCCEEECCCCcc
Confidence 565565555 5 579999999 4678888999874 568999999999999999
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.|+.
T Consensus 230 d~~~~~~l~~~~~--ipIa~dE~-~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~-~~es~ 305 (377)
T 3my9_A 230 HLDAMAGFAAALD--TPILADES-CFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGT-LWEGG 305 (377)
T ss_dssp CHHHHHHHHHHCS--SCEEESTT-CSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCE-ECCSH
T ss_pred CHHHHHHHHHhCC--CCEEECCc-cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEecCC-CCCcH
Confidence 9999999999998 99999998 46799999999999999999999999999999999999999999998776 57887
Q ss_pred hHHHHHHHhhhcCCc
Q 013317 388 DTFIADLSVGLATGQ 402 (445)
Q Consensus 388 ~~~~~~la~a~~~~~ 402 (445)
++..+.++++...++
T Consensus 306 i~~aa~~hlaaa~~~ 320 (377)
T 3my9_A 306 IALAAGTQLIAATPG 320 (377)
T ss_dssp HHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHhCCC
Confidence 765554444433333
No 35
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=100.00 E-value=1.1e-47 Score=393.34 Aligned_cols=312 Identities=15% Similarity=0.201 Sum_probs=228.0
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccC
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
+||||+|+...+ ..+++.++|+|+||+|++|||++... ++ ...+...|++.++|.|+|
T Consensus 22 ~mkIt~v~~~~~--~~~~~~v~V~v~td~Gi~G~GE~~~~-------------------g~-~~~~~~~l~~~l~p~LiG 79 (426)
T 4e4f_A 22 SMKIVSAEVFVT--CPGRNFVTLKITTDSGLTGLGDATLN-------------------GR-ELPVASYLNDHVCPQLIG 79 (426)
T ss_dssp CCBEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCCT-------------------TC-HHHHHHHHHHTHHHHHTT
T ss_pred CcEEEEEEEEEE--cCCCCEEEEEEEECCCCEEEEecccC-------------------CC-cHHHHHHHHHHHHHHHcC
Confidence 589999998766 33567899999999999999975421 11 123445678889999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecC
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVING 160 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~g 160 (445)
+||.+++++|+.|++.. +|+++.+..+|++||||||||+.||.+|+|||+||| |+.++++|++.+ ..+
T Consensus 80 ~dp~~ie~i~~~l~~~~-------~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~~--~~~ 147 (426)
T 4e4f_A 80 RDAHQIEDIWQYFYKGA-------YWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLG---GASRTGVMVYCH--TTG 147 (426)
T ss_dssp SBTTCHHHHHHHHHHHT-------SSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSSSSEEEEEE--ECC
T ss_pred CChhhHHHHHHHHHhhc-------cccCCccchhhHHHHHHHHHHHhHhHcCCcHHHHcC---CCCCCceeEeEe--CCC
Confidence 99999999999998321 122344456899999999999999999999999999 988777877443 221
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcc--c----CCCCCCCCCc------------
Q 013317 161 GSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATN--V----GDEGGFAPNI------------ 222 (445)
Q Consensus 161 g~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~--~----~~~g~~~~~~------------ 222 (445)
. +. ++..+++.+...+||+++ |+|+|..... . +..-.+.+..
T Consensus 148 ~-------~~---------~~~~~~~~~~~~~Gf~~i----KikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (426)
T 4e4f_A 148 H-------SI---------DEVLDDYAKHRDQGFKAI----RVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWST 207 (426)
T ss_dssp S-------SH---------HHHHHHHHHHHHTTCSEE----EECC-------------------CCSEESSSCCEEEECH
T ss_pred C-------CH---------HHHHHHHHHHHHcCCCEE----EEeccCCccccccccccccccccccccccccccccccch
Confidence 1 11 223445555556678765 3455532100 0 0000000100
Q ss_pred ----cCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCee
Q 013317 223 ----QESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIV 298 (445)
Q Consensus 223 ----~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~ 298 (445)
+.+.+.+++||+++ | +++.|++|+ |++||.++++++. +.++++++.
T Consensus 208 ~~~~~~~~e~v~avR~a~---G--~d~~L~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~ 257 (426)
T 4e4f_A 208 EKYLDFTPKLFEAVRDKF---G--FNEHLLHDM------------------------HHRLTPIEAARFG-KSVEDYRLF 257 (426)
T ss_dssp HHHHHHHHHHHHHHHHHH---T--TSSEEEEEC------------------------TTCSCHHHHHHHH-HHTGGGCCS
T ss_pred hHHHHHHHHHHHHHHHHh---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHhhcCCC
Confidence 00123444454444 5 589999999 4678999999875 568999999
Q ss_pred EEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEE
Q 013317 299 SIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVM 378 (445)
Q Consensus 299 ~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~ 378 (445)
|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++
T Consensus 258 ~iEeP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~v~ 334 (426)
T 4e4f_A 258 WMEDPTPAENQACFRLIRQHTV--TPIAVGEVF-NSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRIADFASLYQVRTG 334 (426)
T ss_dssp EEECCSCCSSGGGGHHHHTTCC--SCEEECTTC-CSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEE
T ss_pred EEECCCChHHHHHHHHHHhcCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEe
Confidence 9999999999999999999998 999999985 6799999999999999999999999999999999999999999975
Q ss_pred ecCCCCCChhHH--HHHHHhhhc
Q 013317 379 ASHRSGETEDTF--IADLSVGLA 399 (445)
Q Consensus 379 ~~~~~~et~~~~--~~~la~a~~ 399 (445)
..+.+.++.++. ++||+.++.
T Consensus 335 ~h~~~~~s~i~~aa~~hlaaa~p 357 (426)
T 4e4f_A 335 SHGPSDLSPICMAAALHFDLWVP 357 (426)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHCT
T ss_pred eeCCCCccHHHHHHHHHHHHhCC
Confidence 333345776654 456655543
No 36
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=100.00 E-value=2.1e-47 Score=388.96 Aligned_cols=301 Identities=15% Similarity=0.194 Sum_probs=224.8
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccC
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
|||||+|+++.+ ..+.++|+|+||+|++|+|++... | +..+....++ .++|.|+|
T Consensus 1 mMkIt~i~~~~~----~~~~~~V~v~td~G~~G~GE~~~~---g-----------------~~~~~~~~i~-~l~p~liG 55 (405)
T 3rr1_A 1 MVKITRLTTYRL----PPRWMFLKVETDEGVTGWGEPVIE---G-----------------RARTVEAAVH-ELSDYLIG 55 (405)
T ss_dssp CCCEEEEEEEEE----TTTEEEEEEEETTSCEEEECCCCT---T-----------------CHHHHHHHHH-HHGGGTTT
T ss_pred CCeEEEEEEEEE----CCCEEEEEEEECCCCEEEEeCCCC---C-----------------CHHHHHHHHH-HHHHHHCC
Confidence 899999999988 245799999999999999965431 1 0233334454 49999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecC
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVING 160 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~g 160 (445)
+||.+++++|+.|. .... ++++.+..+|++||||||||+.||.+|+|||+||| |+.++++|+ |.++++
T Consensus 56 ~dp~~~e~~~~~l~-~~~~------~~g~~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~~~ 123 (405)
T 3rr1_A 56 QDPSRINDLWQTMY-RAGF------YRGGPILMSAIAGIDQALWDIKGKVLGVPVYELLG---GLVRDKMRT--YSWVGG 123 (405)
T ss_dssp SCTTCHHHHHHHHH-HTSS------SCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSCEEE--EEECCC
T ss_pred CCcccHHHHHHHHH-Hhhc------ccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---ccccCceee--eEeCCC
Confidence 99999999999998 3211 11233446799999999999999999999999999 987778776 444321
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHh-c
Q 013317 161 GSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAK-G 239 (445)
Q Consensus 161 g~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~-~ 239 (445)
. + +++..+++.+...+||+++| . +|... ..+.......++.++.+ +++|+ +
T Consensus 124 ~-------~---------~e~~~~~a~~~~~~G~~~iK----l-~G~~~------~~~~~~~~~~~~d~e~v-~avR~av 175 (405)
T 3rr1_A 124 D-------R---------PADVIAGMKALQAGGFDHFK----L-NGCEE------MGIIDTSRAVDAAVARV-AEIRSAF 175 (405)
T ss_dssp S-------S---------HHHHHHHHHHHHHTTCCEEE----E-ESCCS------SSCBCSHHHHHHHHHHH-HHHHHTT
T ss_pred C-------C---------HHHHHHHHHHHHHcCCCEEE----E-ecCCc------ccccccchhHHHHHHHH-HHHHHHh
Confidence 1 1 12234455555555666553 2 23210 01111111223445555 34443 5
Q ss_pred CCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHh
Q 013317 240 GYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKI 319 (445)
Q Consensus 240 G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~ 319 (445)
| +++.|++|+ |++||.++++++. +.++++++.|||||++++|++++++|++++
T Consensus 176 G--~d~~L~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~ 228 (405)
T 3rr1_A 176 G--NTVEFGLDF------------------------HGRVSAPMAKVLI-KELEPYRPLFIEEPVLAEQAETYARLAAHT 228 (405)
T ss_dssp G--GGSEEEEEC------------------------CSCBCHHHHHHHH-HHHGGGCCSCEECSSCCSSTHHHHHHHTTC
T ss_pred C--CCceEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCCcccHHHHHHHHhcC
Confidence 5 689999999 4678999999875 568999999999999999999999999998
Q ss_pred CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHH--HHHHHhh
Q 013317 320 GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTF--IADLSVG 397 (445)
Q Consensus 320 ~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~--~~~la~a 397 (445)
+ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++++ + ++.++. .+||+.+
T Consensus 229 ~--iPIa~dE~i-~~~~~~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~-~-~s~i~~aa~~hlaaa 303 (405)
T 3rr1_A 229 H--LPIAAGERM-FSRFDFKRVLEAGGVSILQPDLSHAGGITECVKIAAMAEAYDVALAPHC-P-LGPIALAACLHVDFV 303 (405)
T ss_dssp S--SCEEECTTC-CSHHHHHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHTTTCEECCBC-C-SCHHHHHHHHHHHHH
T ss_pred C--CCEEecCCc-CCHHHHHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCC-C-CcHHHHHHHHHHHHh
Confidence 8 999999984 6799999999999999999999999999999999999999999987554 3 576655 4555554
Q ss_pred h
Q 013317 398 L 398 (445)
Q Consensus 398 ~ 398 (445)
+
T Consensus 304 ~ 304 (405)
T 3rr1_A 304 S 304 (405)
T ss_dssp C
T ss_pred C
Confidence 3
No 37
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=100.00 E-value=1.9e-47 Score=383.77 Aligned_cols=304 Identities=17% Similarity=0.215 Sum_probs=235.3
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ ++.++|+|+||+|++|||++... +.|++++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~a~~~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~ge~~~~~~~~ 65 (354)
T 3jva_A 1 MKIKQVHVRASKIKLKETFTIALGTIESADSAIVEIETEEGLVGYGEGGPG---------------IFITGETLAGTLET 65 (354)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCC---------------TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEEeccCCEEecCcEEeeceEEEEEEEECCCCEEEEeecCC---------------CCcCCCCHHHHHHH
Confidence 699999998772 3333 35699999999999999954321 12456667777777
Q ss_pred HHHhHh---hhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCC
Q 013317 70 VNSIIG---PALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNK 146 (445)
Q Consensus 70 i~~~l~---p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~ 146 (445)
|+ .++ |.|+|+||.+++++|+.|. .+ ..+|++|||+||||+.||.+|+|||+||| | .
T Consensus 66 i~-~l~~~~p~l~G~d~~~~~~~~~~l~---~~------------~~~A~~aid~AlwDl~gk~~g~Pl~~llG---g-~ 125 (354)
T 3jva_A 66 IE-LFGQAIIGLNPFNIEKIHEVMDKIS---AF------------APAAKAAIDIACYDLMGQKAQLPLYQLLG---G-Y 125 (354)
T ss_dssp HH-HHHTTSTTCCTTCHHHHHHHHHHHC---SS------------CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---C-S
T ss_pred HH-HHhhcCccccCCCcccHHHHHHHHh---cc------------cHHHHHHHHHHHHHHHHHHcCCcHHHHhh---c-c
Confidence 77 789 9999999999999998775 11 13699999999999999999999999999 8 5
Q ss_pred cceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCch
Q 013317 147 TLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESY 226 (445)
Q Consensus 147 ~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~ 226 (445)
++++|+.. .++.+ .++...+++.+...+||+++ |.|+|.. .+.+.
T Consensus 126 ~~~v~~~~--~~~~~----------------~~~~~~~~a~~~~~~G~~~~----K~K~g~~-------------~~~d~ 170 (354)
T 3jva_A 126 DNQVITDI--TLGID----------------EPNVMAQKAVEKVKLGFDTL----KIKVGTG-------------IEADI 170 (354)
T ss_dssp CSEEECCE--EECSC----------------CHHHHHHHHHHHHHTTCSEE----EEECCSC-------------HHHHH
T ss_pred CCeeeeeE--EeCCC----------------CHHHHHHHHHHHHHhCCCeE----EEEeCCC-------------HHHHH
Confidence 67777632 22111 11233456666666677655 3455421 12345
Q ss_pred HHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCc
Q 013317 227 EGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~ 306 (445)
+.+++||+++ | +++.|++|+ |++||.+++++++ +.++++++.|||||+++
T Consensus 171 ~~v~avR~a~---g--~~~~l~vDa------------------------n~~~~~~~a~~~~-~~L~~~~i~~iEqP~~~ 220 (354)
T 3jva_A 171 ARVKAIREAV---G--FDIKLRLDA------------------------NQAWTPKDAVKAI-QALADYQIELVEQPVKR 220 (354)
T ss_dssp HHHHHHHHHH---C--TTSEEEEEC------------------------TTCSCHHHHHHHH-HHTTTSCEEEEECCSCT
T ss_pred HHHHHHHHHc---C--CCCeEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCCh
Confidence 5555555554 5 579999999 4678999999885 45799999999999999
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ +||++||+ ++++++++++++.+++|++++|++++||+|++++++++|+++|++++++|+.+|+
T Consensus 221 ~d~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~es 297 (354)
T 3jva_A 221 RDLEGLKYVTSQVN--TTIMADES-CFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMAEET 297 (354)
T ss_dssp TCHHHHHHHHHHCS--SEEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCTTCC
T ss_pred hhHHHHHHHHHhCC--CCEEEcCC-cCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCCCccc
Confidence 99999999999998 99999998 5779999999999999999999999999999999999999999999988875599
Q ss_pred hhHHHHHHHhhhcCCccccCCC
Q 013317 387 EDTFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 387 ~~~~~~~la~a~~~~~~~~G~~ 408 (445)
.++..+.++++...++......
T Consensus 298 ~i~~~a~~hlaaa~~~~~~~e~ 319 (354)
T 3jva_A 298 TIGITAAAHLAAAQKNITRADL 319 (354)
T ss_dssp HHHHHHHHHHHHHCTTEEEECC
T ss_pred HHHHHHHHHHHhcCCCCCcccc
Confidence 8876666655554455444343
No 38
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.2e-47 Score=389.70 Aligned_cols=306 Identities=15% Similarity=0.175 Sum_probs=238.1
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||||++|+++.+. .+.+ +++++|+|+|++|++|||+++... .+.|.++++.+++.
T Consensus 19 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~G~GE~~~~~-------------~~~~~~e~~~~~~~ 85 (386)
T 1wue_A 19 HMNIQSIETYQVRLPLKTPFVTSYGRLEEKAFDLFVITDEQGNQGFGELVAFE-------------QPDYVQETLVTERF 85 (386)
T ss_dssp CCCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCS-------------STTSSSCCHHHHHH
T ss_pred cCEEEEEEEEEEecccCCCccccceEEecCcEEEEEEEECCCCEEEEEeecCC-------------CCcccCCcHHHHHH
Confidence 5899999998772 3333 357999999999999999665421 12377788888888
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
.|++.++|.|+|+|+.+++++|+.|. .+++ +.+|++|||+||||+.||.+|+|||+||| | .++
T Consensus 86 ~i~~~l~p~l~G~d~~~~~~l~~~l~-~~~g------------~~~A~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~ 148 (386)
T 1wue_A 86 IIQQHLIPLLLTEAIEQPQEVSTIFE-EVKG------------HWMGKAALETAIWDLYAKRQQKSLTEFFG---P-TRR 148 (386)
T ss_dssp HHHHTHHHHHTTSCCCSTHHHHHHGG-GSCS------------CHHHHHHHHHHHHHHHHHHTTSBGGGGSS---S-CCS
T ss_pred HHHHHHHHHHcCCCccCHHHHHHHHH-HccC------------chHHHHHHHHHHHHHHHHHhCCcHHHHhC---C-CCC
Confidence 89888999999999999999999887 4321 15799999999999999999999999999 8 567
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
++|++. ++ |.. .+. ++.++++.+...+||+++| .|+| + +.+.+.
T Consensus 149 ~v~~~~--~~--g~~----~~~---------~~~~~~a~~~~~~G~~~~K----iKvg-------------~--~~d~~~ 192 (386)
T 1wue_A 149 KIPVGI--SL--GIQ----EDL---------PQLLKQVQLAVEKGYQRVK----LKIR-------------P--GYDVEP 192 (386)
T ss_dssp EEECCE--EE--CCC----SCH---------HHHHHHHHHHHHTTCSCEE----EECB-------------T--TBSHHH
T ss_pred eeEeeE--Ee--cCC----CCH---------HHHHHHHHHHHHhhhheEE----EeeC-------------c--HHHHHH
Confidence 788754 22 110 011 2234566666666776553 3433 1 123566
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
+++||+++ +++.|++|+ |+.||.+++ ++ .+.+++|++.|||||++++|
T Consensus 193 v~avr~a~------~~~~l~vDa------------------------N~~~~~~~a-~~-~~~l~~~~i~~iEqP~~~~d 240 (386)
T 1wue_A 193 VALIRQHF------PNLPLMVDA------------------------NSAYTLADL-PQ-LQRLDHYQLAMIEQPFAADD 240 (386)
T ss_dssp HHHHHHHC------TTSCEEEEC------------------------TTCCCGGGH-HH-HHGGGGSCCSCEECCSCTTC
T ss_pred HHHHHHhC------CCCeEEEeC------------------------CCCCCHHHH-HH-HHHHHhCCCeEEeCCCCccc
Confidence 66666553 579999999 456788888 76 56789999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
+++|++|+++++ +||++||++ .++++++++++.+++|++|||++++||||++++++++|+++|++++++|+ .|+.+
T Consensus 241 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~-~es~i 316 (386)
T 1wue_A 241 FLDHAQLQRELK--TRICLDENI-RSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLGGM-FESGV 316 (386)
T ss_dssp SHHHHHHHTTCS--SCEEECTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCC-CCCHH
T ss_pred HHHHHHHHHhcC--CCEEeCCcc-CCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEECCC-cccHH
Confidence 999999999988 999999985 56999999999999999999999999999999999999999999998884 68988
Q ss_pred HHHHHHHhhhcCCccccCCC
Q 013317 389 TFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 389 ~~~~~la~a~~~~~~~~G~~ 408 (445)
+..++++++..+.+..++++
T Consensus 317 ~~aa~~hlaa~~~~~~~~~~ 336 (386)
T 1wue_A 317 GRALNLQFASQPTFSFPGDI 336 (386)
T ss_dssp HHHHHHHHHTSTTCCSCCSC
T ss_pred HHHHHHHHHhCCCCCccccc
Confidence 77666666533333333443
No 39
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=100.00 E-value=3.1e-47 Score=388.22 Aligned_cols=321 Identities=12% Similarity=0.115 Sum_probs=230.1
Q ss_pred cceeEEEEEEEecC----CCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhh
Q 013317 2 VTINAVKARQIFDS----RGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPA 77 (445)
Q Consensus 2 ~~I~~v~~~~i~~~----~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~ 77 (445)
|||++|+++.+... .++..++|+|+||+|++|||++.... +. ..+....|++.++|.
T Consensus 2 MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~~G~GE~~~~~----------------~~---~~~~~~~i~~~l~p~ 62 (404)
T 4e5t_A 2 MRLSDIETFVVGNPPPRHGGRYFIFVKLVTACGITGYGEIYNAT----------------FG---PDLVAKMAEDVFARQ 62 (404)
T ss_dssp CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSCEEEEEECCCS----------------SC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEeccCCcccCCCceEEEEEEECCCCEEEEeeccCC----------------Cc---hHHHHHHHHHHHHHH
Confidence 69999999988532 13567999999999999999764311 11 234445677788999
Q ss_pred ccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEe
Q 013317 78 LVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNV 157 (445)
Q Consensus 78 LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~ 157 (445)
|+|+||.+++++|+.|++.. ++.+.+....+|+|||||||||+.||.+|+|||+||| |+.++++|++. +
T Consensus 63 liG~dp~~~e~~~~~~~~~~------~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~--~ 131 (404)
T 4e5t_A 63 FAGEDPHHIEKLWHKTYGAG------YTQRPDVTVMGVLSGLEMACWDIIGKAAGKPAYELLG---GKVHERLRSYT--Y 131 (404)
T ss_dssp TTTSCTTCHHHHHHHHHTTT------SCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCCCSSEEEEE--E
T ss_pred hcCCChhHHHHHHHHHHHhh------hhcCCchHHHHHHHHHHHHHHHHhhhHcCCcHHHHcC---CCCcCeEEEEE--E
Confidence 99999999999999997221 1111223335799999999999999999999999999 98788888743 3
Q ss_pred ecCCc-c--CCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCC---ccCchHHHHH
Q 013317 158 INGGS-H--ADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPN---IQESYEGFEL 231 (445)
Q Consensus 158 ~~gg~-~--~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~---~~~~~~~l~~ 231 (445)
+.... + -+...... +..+++..+++.+...+||+++ |.|.|.... +..| ..+. .+.+.+.+++
T Consensus 132 ~~~~~~~~~p~~d~~~~----~~~~e~~~~~a~~~~~~G~~~~----KlK~g~~~~--~~~g-~~~~~~~~~~d~~~v~a 200 (404)
T 4e5t_A 132 LYPTDGDVYPDPDKPNV----YNDADMAAEAAAKAVDQGFTAV----KFDPAGAYT--IYDG-HQPSLEDLERSEAFCKQ 200 (404)
T ss_dssp CCC----------CCCT----TTCHHHHHHHHHHHHHHTCSEE----EECCSCCCB--TTCS-BCCCHHHHHHHHHHHHH
T ss_pred ecccccccccccccccc----CCCHHHHHHHHHHHHHcCCCEE----eeCCCCCCc--cccc-ccccHHHHHHHHHHHHH
Confidence 21000 0 00000000 0112334555666666777765 345552110 0111 1121 2223444555
Q ss_pred HHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHH
Q 013317 232 LKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEH 311 (445)
Q Consensus 232 v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~ 311 (445)
||+++ | +++.|++|+ |++||.++++++. +.++++++.|||||++++|+++
T Consensus 201 vR~a~---G--~d~~l~vDa------------------------n~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~~~~~ 250 (404)
T 4e5t_A 201 IRAAV---G--TKADLLFGT------------------------HGQFTVSGAKRLA-RRLEAYDPLWFEEPIPPEKPED 250 (404)
T ss_dssp HHHHH---G--GGSEEEECC------------------------CSCBCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHH
T ss_pred HHHHc---C--CCCeEEEeC------------------------CCCcCHHHHHHHH-HHHhhcCCcEEECCCCcccHHH
Confidence 55444 5 579999999 5678999999874 5689999999999999999999
Q ss_pred HHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHH
Q 013317 312 YAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFI 391 (445)
Q Consensus 312 ~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~ 391 (445)
+++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|+ .++.++.+
T Consensus 251 ~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~~ia~~A~~~gi~~~-~h~-~~s~i~~a 325 (404)
T 4e5t_A 251 MAEVARYTS--IPVATGERL-CTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAMAECHSAQIA-PHL-YCGPLVAL 325 (404)
T ss_dssp HHHHHHHCS--SCEEECTTC-CHHHHHHHHHHHTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEEC-CCC-SSCHHHHH
T ss_pred HHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEe-ecC-CCcHHHHH
Confidence 999999998 999999985 6799999999999999999999999999999999999999999975 564 35766554
Q ss_pred HHHHhhh
Q 013317 392 ADLSVGL 398 (445)
Q Consensus 392 ~~la~a~ 398 (445)
+.++++.
T Consensus 326 a~~hlaa 332 (404)
T 4e5t_A 326 ANIQLAT 332 (404)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 40
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=3.2e-47 Score=384.57 Aligned_cols=305 Identities=17% Similarity=0.179 Sum_probs=227.9
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +..++|+|+|| |++|||++.... .+.|.+++.+++...
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~v~V~i~td-G~~G~GE~~~~~-------------~p~~~~e~~~~~~~~ 66 (370)
T 2chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVYSE-GLVGVGEGGSVG-------------GPVWSAECAETIKII 66 (370)
T ss_dssp CCCCEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEBT-TBCCEEECCCST-------------TTTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEcccCCceEccceEEEEEEEEEEEEEEC-CcEEEEEecCCC-------------CCccCcccHHHHHHH
Confidence 699999998762 3444 35699999985 999999543211 123677778888888
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
|++.++|.|+|+||.+++++|+.|.+.+.+ ..+|++|||+||||+.||.+|+|||+||| |..++.
T Consensus 67 i~~~l~p~liG~d~~~~~~~~~~~~~~~~~------------~~~A~said~AlwDl~gK~~g~Pl~~lLG---g~~~~~ 131 (370)
T 2chr_A 67 VERYLAPHLLGTDAFNVSGALQTMARAVTG------------NASAKAAVEMALLDLKARALGVSIAELLG---GPLRSA 131 (370)
T ss_dssp HHHHTHHHHTTSCTTCHHHHHHHHHTTCSS------------CHHHHHHHHHHHHHHHHHHTTCCHHHHTT---CCSCSE
T ss_pred HHHHHHHHhcCCCcccHHHHHHHHhhcccc------------cHHHHHHHHHHHHHHHHHhcCCccccccC---Cccccc
Confidence 999999999999999999999999832211 13699999999999999999999999999 988777
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
+|+ +..+..+. . .+...+..+... .+|+.+ |.|+| . ....+.
T Consensus 132 ~~~--~~~~~~~~-------~---------~~~~~~~~~~~~~~g~~~~----K~Kvg-------~--------~~~~~d 174 (370)
T 2chr_A 132 IPI--AWTLASGD-------T---------KRDLDSAVEMIERRRHNRF----KVKLG-------F--------RSPQDD 174 (370)
T ss_dssp EEB--EEEECSSC-------H---------HHHHHHHHHHHHTTSCCEE----EEECS-------S--------SCHHHH
T ss_pred cce--eeeeccCc-------h---------hhhHHHHHHHHhhccccee----ecccc-------c--------CChHHH
Confidence 765 33322221 0 011112211111 122222 23333 1 112444
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
++.++...+.+| +++.|++|+ |+.||.++++++. +.++++++.|||||++++|
T Consensus 175 ~~~v~avr~~~g--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~~~~iEeP~~~~d 227 (370)
T 2chr_A 175 LIHMEALSNSLG--SKAYLRVDV------------------------NQAWDEQVASVYI-PELEALGVELIEQPVGREN 227 (370)
T ss_dssp HHHHHHHHHHTT--TTSEEEEEC------------------------TTCCCTHHHHHHH-HHHHTTTCCEEECCSCSSC
T ss_pred HHHHHHHHHhcC--CCcEEEecC------------------------CCCCCHHHHHHHH-HHHHhcCCceecCCCChhh
Confidence 555532222356 689999999 5678999999975 5579999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.++.+
T Consensus 228 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~~~~i 303 (370)
T 2chr_A 228 TQALRRLSDNNR--VAIMADESL-STLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGT-MLDSTI 303 (370)
T ss_dssp HHHHHHHHHHCS--SEEEESSSC-CSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCC-CSCCHH
T ss_pred hhhhhHHhhhcc--CCccCCccC-CCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCC-CcccHH
Confidence 999999999998 999999985 6799999999999999999999999999999999999999999988777 468877
Q ss_pred HHHHHHHhhhcCCcc
Q 013317 389 TFIADLSVGLATGQI 403 (445)
Q Consensus 389 ~~~~~la~a~~~~~~ 403 (445)
+.++.++++...+++
T Consensus 304 ~~aa~~hlaa~~p~~ 318 (370)
T 2chr_A 304 GTSVALQLYSTVPSL 318 (370)
T ss_dssp HHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHHhCCCC
Confidence 765555555444443
No 41
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=100.00 E-value=1.2e-47 Score=390.51 Aligned_cols=316 Identities=18% Similarity=0.177 Sum_probs=232.6
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhh-hcc
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGP-ALV 79 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p-~Li 79 (445)
.|||++|+++.+. +.+.++++|+|+|++|++|||+++.. | +++..++...|+ .|+| .|+
T Consensus 2 ~mkI~~i~~~~v~-~~~~~~v~V~v~td~G~~G~GE~~~~-----------------~-g~~~~~~~~~i~-~l~~~~l~ 61 (392)
T 2poz_A 2 SLKITGVNIYLLK-SGRLHPVLVEISTDEGITGAGEAGIA-----------------Y-GVGGTAAAGMIK-DLSERFLI 61 (392)
T ss_dssp -CCEEEEEEEECC-BTTBCCEEEEEEETTSCCEEEEESCS-----------------S-SSCHHHHHHHHH-HHHHHHTT
T ss_pred CCeEEEEEEEEEe-cCCccEEEEEEEECCCCEEEEeecCC-----------------c-CCchHHHHHHHH-HhhHhhhc
Confidence 0899999999998 65556799999999999999976531 1 334566666776 4999 999
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeec
Q 013317 80 GKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVIN 159 (445)
Q Consensus 80 G~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~ 159 (445)
|+||.+++.+|+.|.+...++.+ .++++.+|++|||+||||+.||.+|+|||+||| |..++++ |+|++
T Consensus 62 G~d~~~~~~i~~~l~~~~~~~~~-----~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~~~~~v--~~y~~-- 129 (392)
T 2poz_A 62 GKDPSRIEELWSTMYDHSFWAKN-----GGAIIFAGISAIEQALWDIKGKCLGVPVYELFG---GKIRDRV--RAYAN-- 129 (392)
T ss_dssp TCCTTCHHHHHHHHHHHSSTTTT-----CCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEE--EEEEC--
T ss_pred CCChhHHHHHHHHHHHhcccccC-----CchHHHHHHHHHHHHHHHHhhhhcCCcHHHHcC---CCccCce--EEEEe--
Confidence 99999999999999833232211 334557899999999999999999999999999 9766655 45664
Q ss_pred CCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCC------CCccCchHHHHHHH
Q 013317 160 GGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFA------PNIQESYEGFELLK 233 (445)
Q Consensus 160 gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~------~~~~~~~~~l~~v~ 233 (445)
| +..+..+. ++..+++.+...++|+.+| .|.|..... +..+++. .+.+.+.+.+++||
T Consensus 130 -g-~~~~~~~~---------~~~~~~a~~~~~~Gf~~vK----ik~g~~~~g-~~~~~~~~gg~~~~~~~~~~e~v~avr 193 (392)
T 2poz_A 130 -G-WYGAADTP---------DEFARAVERPLKEGYGALK----FYPLAQRVG-SALQHVTRRSMSAEAIELAYRRVKAVR 193 (392)
T ss_dssp -S-CCTTCCSH---------HHHHHHTHHHHHTTCSEEE----ECCCCEEET-TEEECCBTTBCCHHHHHHHHHHHHHHH
T ss_pred -c-cccCCCCH---------HHHHHHHHHHHHcCCCEEE----Eeccccccc-ccccccccCCcchhhHHHHHHHHHHHH
Confidence 2 11100112 2234556665666776553 444411000 0000111 11222344454444
Q ss_pred HHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHH
Q 013317 234 TAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYA 313 (445)
Q Consensus 234 ~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~ 313 (445)
++ +| +++.|++|+ |++||.+++++++. .+++|++.|||||++++|+++++
T Consensus 194 ~a---~G--~d~~l~vD~------------------------n~~~~~~~a~~~~~-~l~~~~i~~iE~P~~~~~~~~~~ 243 (392)
T 2poz_A 194 DA---AG--PEIELMVDL------------------------SGGLTTDETIRFCR-KIGELDICFVEEPCDPFDNGALK 243 (392)
T ss_dssp HH---HC--TTSEEEEEC------------------------TTCSCHHHHHHHHH-HHGGGCEEEEECCSCTTCHHHHH
T ss_pred Hh---cC--CCCEEEEEC------------------------CCCCCHHHHHHHHH-HHHhcCCCEEECCCCcccHHHHH
Confidence 44 46 579999999 45688999999854 58999999999999999999999
Q ss_pred HHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHH--H
Q 013317 314 ELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTF--I 391 (445)
Q Consensus 314 ~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~--~ 391 (445)
+|+++++ +||++||++ .++++++++++.+++|++++|++|+||||++++++++|+++|+++++++ ++ +.++. .
T Consensus 244 ~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~-~~-s~i~~aa~ 318 (392)
T 2poz_A 244 VISEQIP--LPIAVGERV-YTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHV-CG-SSLIETAT 318 (392)
T ss_dssp HHHHHCS--SCEEECTTC-CHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCC-CS-SHHHHHHH
T ss_pred HHHhhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecCC-CC-CHHHHHHH
Confidence 9999998 999999995 5599999999999999999999999999999999999999999987654 55 77654 4
Q ss_pred HHHHhhhc
Q 013317 392 ADLSVGLA 399 (445)
Q Consensus 392 ~~la~a~~ 399 (445)
+||+.++.
T Consensus 319 ~hlaaa~~ 326 (392)
T 2poz_A 319 LQLEANIT 326 (392)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhCC
Confidence 56665543
No 42
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=100.00 E-value=1.1e-47 Score=387.75 Aligned_cols=304 Identities=18% Similarity=0.193 Sum_probs=232.5
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .|.+ +..++|+|+ |+|++|||++.... ++.|.+++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~~G~GE~~~~~-------------~~~~~~e~~~~~~~~ 66 (370)
T 1chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVY-SEGLVGVGEGGSVG-------------GPVWSAECAETIKII 66 (370)
T ss_dssp CCCCCCCEECCCCCCCCCCTTCCSSCCCCCCEECCBC-SSSCBCCEECCCBT-------------TBTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEccCCCCeEccceEEeeeeEEEEEEE-ECCcEEEEccccCC-------------CCCCCCCCHHHHHHH
Confidence 699999998773 2222 356999999 99999999653210 123677788888888
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
|++.++|.|+|+||.+++++|+.|++.+.+ ..+|++||||||||+.||.+|+|||+||| |..+++
T Consensus 67 i~~~l~p~l~G~d~~~~~~~~~~l~~~~~g------------~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~ 131 (370)
T 1chr_A 67 VERYLAPHLLGTDAFNVSGALQTMARAVTG------------NASAKAAVEMALLDLKARALGVSIAELLG---GPLRSA 131 (370)
T ss_dssp HHHHTHHHHTTSCTTCHHHHHHHHHHHCSS------------CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSE
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHHHHhcC------------cHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCc
Confidence 988899999999999999999999843321 14799999999999999999999999999 987888
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
+|+ +.++..+. . .+.++++.+... ++|+++ |.|+|. .+.+.+.+.
T Consensus 132 v~~--~~t~~~~~-------~---------~~~~~~~~~~~~~~G~~~~----KiKvg~------------~~~~~d~~~ 177 (370)
T 1chr_A 132 IPI--AWTLASGD-------T---------KRDLDSAVEMIERRRHNRF----KVKLGF------------RSPQDDLIH 177 (370)
T ss_dssp EEB--EEEECSSS-------H---------HHHHHHHHHHHHTTCCCEE----EEECSS------------SCSHHHHHH
T ss_pred eeE--EEEecCCC-------c---------HHHHHHHHHHHHHCCCCEE----EEecCC------------CCHHHHHHH
Confidence 887 33332221 0 122344444443 355543 345441 112233444
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
+++||++ +| +++.|++|+ |++||.++++++. +.++++++.|||||++++|
T Consensus 178 v~avR~~---~g--~~~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~~ 227 (370)
T 1chr_A 178 MEALSNS---LG--SKAYLRVDV------------------------NQAWDEQVASVYI-PELEALGVELIEQPVGREN 227 (370)
T ss_dssp HHHHHHH---SS--TTCCEEEEC------------------------TTCCCTTHHHHHT-HHHHTTTEEEEECCSCTTC
T ss_pred HHHHHHh---cC--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCCccc
Confidence 4444443 45 579999999 4678888999874 5689999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.|+.+
T Consensus 228 ~~~~~~l~~~~~--iPia~dE~~-~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i 303 (370)
T 1chr_A 228 TQALRRLSDNNR--VAIMADESL-STLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGT-MLDSTI 303 (370)
T ss_dssp HHHHHHHHHHSC--SEEEESSSC-CSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECC-SCCTTH
T ss_pred HHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecC-CCccHH
Confidence 999999999998 999999984 6799999999999999999999999999999999999999999998777 468877
Q ss_pred HHHHHHHhhhcCCc
Q 013317 389 TFIADLSVGLATGQ 402 (445)
Q Consensus 389 ~~~~~la~a~~~~~ 402 (445)
+..+.++++...++
T Consensus 304 ~~aa~~hlaaa~~~ 317 (370)
T 1chr_A 304 GTSVALQLYSTVPS 317 (370)
T ss_dssp HHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHhCCC
Confidence 76555555443444
No 43
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=100.00 E-value=2.8e-47 Score=389.69 Aligned_cols=318 Identities=15% Similarity=0.205 Sum_probs=232.3
Q ss_pred cceeEEEEEEEecCCCCC-----eEEEEEEeCCCcEEEEec-cCCCccccccceeeccCCcccCCccHHHHHHHHHHhHh
Q 013317 2 VTINAVKARQIFDSRGNP-----TVEVDVSLSDGTLARAAV-PSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIG 75 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~-----~v~V~V~td~G~~G~g~~-~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~ 75 (445)
|||++|+++.+..+..+| +++|+|+||+|++|||++ +.. | .+..++...|++ ++
T Consensus 4 MkI~~i~~~~~~~p~~~p~~~~~~v~V~v~td~G~~G~Ge~a~~~---g----------------~~~~~~~~~i~~-l~ 63 (407)
T 2o56_A 4 MKITSVDIIDVANDFASATSKWRPVVVKINTDEGISGFGEVGLAY---G----------------VGASAGIGMAKD-LS 63 (407)
T ss_dssp CCEEEEEEEECCCCC-----CCCCEEEEEEETTSCEEEEEESCSS---S----------------SCHHHHHHHHHH-HH
T ss_pred CEEEEEEEEEeccccCCCcccceeEEEEEEeCCCCEEEEeeccCC---C----------------CchHHHHHHHHH-HH
Confidence 799999999997765555 679999999999999976 531 1 113445566776 99
Q ss_pred hhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeE
Q 013317 76 PALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAF 155 (445)
Q Consensus 76 p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~ 155 (445)
|.|+|+||.+++++|+.|. ... +|..+.+++..+|++|||+||||+.||.+|+|||+||| |..++++|+ |
T Consensus 64 p~liG~d~~~~~~i~~~l~-~~~----~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~vp~--y 133 (407)
T 2o56_A 64 AIIIGMDPMNNEAIWEKML-KKT----FWGQGGGGIFSAAMSGIDIALWDIKGKAWGVPLYKMLG---GKSREKIRT--Y 133 (407)
T ss_dssp HHHTTSCTTCHHHHHHHHH-HSS----SGGGGCBHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSSEEE--E
T ss_pred HHhCCCChHHHHHHHHHHH-Hhc----cccCCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCCCCeeee--e
Confidence 9999999999999999998 322 01112344567899999999999999999999999999 976666554 6
Q ss_pred Ee-ec-C-CccC--CCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhc------CCCCcccCCCCCCCC--Cc
Q 013317 156 NV-IN-G-GSHA--DNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKY------GQDATNVGDEGGFAP--NI 222 (445)
Q Consensus 156 ~~-~~-g-g~~~--~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~------G~~~~~~~~~g~~~~--~~ 222 (445)
++ ++ | +.|+ ++..+.+ +.++++.+...++|+.+| .|. |.. ..++.+++.+ +.
T Consensus 134 ~~~i~~g~~~~~~~~~~~~~~---------~~~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~--~~s~~~~~~~~~~~ 198 (407)
T 2o56_A 134 ASQLQFGWGDGSDKDMLTEPE---------QYAQAALTAVSEGYDAIK----VDTVAMDRHGNW--NQQNLNGPLTDKIL 198 (407)
T ss_dssp EECGGGCCSTTCTTCCCCSHH---------HHHHHHHHHHHTTCSEEE----ECCSSBCTTSCB--SCSCCCSSCCHHHH
T ss_pred eeeccCCccccccccccCCHH---------HHHHHHHHHHHcCCCEEE----EcccccCCcCcc--ccCcccCCCchhHH
Confidence 65 44 3 2222 0111122 234566666666776664 332 211 1112233221 11
Q ss_pred cCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEEC
Q 013317 223 QESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIED 302 (445)
Q Consensus 223 ~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEd 302 (445)
+.+.+.+++||++ +| +++.|++|+ |++||.+++++++. .+++|++.||||
T Consensus 199 ~~~~e~v~avR~a---~G--~d~~l~vDa------------------------n~~~~~~~a~~~~~-~l~~~~i~~iE~ 248 (407)
T 2o56_A 199 RLGYDRMAAIRDA---VG--PDVDIIAEM------------------------HAFTDTTSAIQFGR-MIEELGIFYYEE 248 (407)
T ss_dssp HHHHHHHHHHHHH---HC--TTSEEEEEC------------------------TTCSCHHHHHHHHH-HHGGGCCSCEEC
T ss_pred HHHHHHHHHHHHh---cC--CCCEEEEEC------------------------CCCCCHHHHHHHHH-HHHhcCCCEEeC
Confidence 2233444444444 46 579999999 45688999999854 589999999999
Q ss_pred CCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCC
Q 013317 303 PFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~ 382 (445)
|++++|++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|+++++++
T Consensus 249 P~~~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~- 324 (407)
T 2o56_A 249 PVMPLNPAQMKQVADKVN--IPLAAGERI-YWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHV- 324 (407)
T ss_dssp SSCSSSHHHHHHHHHHCC--SCEEECTTC-CHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCC-
T ss_pred CCChhhHHHHHHHHHhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecC-
Confidence 999999999999999998 999999985 5699999999999999999999999999999999999999999987654
Q ss_pred CCCChhHH--HHHHHhhhc
Q 013317 383 SGETEDTF--IADLSVGLA 399 (445)
Q Consensus 383 ~~et~~~~--~~~la~a~~ 399 (445)
+. +.++. .+||+.++.
T Consensus 325 ~~-s~i~~aa~~hlaaa~~ 342 (407)
T 2o56_A 325 CG-GPISTAVALHMETAIP 342 (407)
T ss_dssp CS-CHHHHHHHHHHHHHCT
T ss_pred CC-CHHHHHHHHHHHHhCC
Confidence 44 77665 456655543
No 44
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=100.00 E-value=4.8e-47 Score=385.00 Aligned_cols=300 Identities=16% Similarity=0.151 Sum_probs=224.8
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +..++|+|+||+|++|||.+... +++..++...
T Consensus 20 MkIt~Ie~~~~~~Pl~~p~~~s~g~~~~~~~vlV~i~td~G~~G~Ge~~~~-------------------~~~~~~~~~~ 80 (388)
T 4h83_A 20 LTITRIETIPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDE-------------------HETMFDIDRI 80 (388)
T ss_dssp CBEEEEEEEEEEEEC----------CCEEEEEEEEEEETTSCEEEEEECCC-------------------CTTHHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCEECCCEEEEEEEEEEEEEEECCCCEEEEEecCC-------------------cccHHHHHHH
Confidence 799999998773 2333 35699999999999999865321 2235566677
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
|++.|+|.|+|+||.+++++|+.|. .... +.++.+....+|+|||||||||+.||.+|+|||+||| |. +++
T Consensus 81 i~~~lap~LiG~dp~~ie~l~~~~~-~~~~----~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pl~~LLG---g~-~~~ 151 (388)
T 4h83_A 81 IHEELAPTLIGQDAMAIERLWDSGY-KVTF----DILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWG---GY-RNE 151 (388)
T ss_dssp HHHTTHHHHTTSBTTCHHHHHHHHG-GGGC----CTTSCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CS-CSE
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHH-hhhh----hhccCCchhHHHHHHHHHHHHHHHHHHcCCChhhhcC---CC-cCc
Confidence 8899999999999999999999998 3221 1112234456899999999999999999999999999 85 556
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|++.++. ... . + .+...+++.+...+||+++ |.|+|. .+.+.+.+.+
T Consensus 152 ~~~y~~~~----~~~-~--~---------~~~~~~~~~~~~~~G~~~~----Kikvg~------------~~~~~d~~~v 199 (388)
T 4h83_A 152 LPMIAIGG----YYG-E--P---------LGSIADEMHNYQELGLAGV----KFKVGG------------LSAAEDAARI 199 (388)
T ss_dssp EEEEEEEC----CTT-C--T---------TCSHHHHHHHHHHHTBSEE----EEECSS------------SCHHHHHHHH
T ss_pred eEEEeecc----ccC-C--C---------HHHHHHHHHHHHHcCCceE----eecCCC------------CCHHHHHHHH
Confidence 77644322 110 0 0 1123445555555667654 345431 1223344555
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCc-cC
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQ-DD 308 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~-~D 308 (445)
+.+|+++ | +++.|+||+ |+.||.+++++++ +.++++++.|||||+++ +|
T Consensus 200 ~avR~~~---G--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~~~~iEeP~~~~~d 249 (388)
T 4h83_A 200 TAAREAA---G--DDFIICIDA------------------------NQGYKPAVAVDLS-RRIADLNIRWFEEPVEWHND 249 (388)
T ss_dssp HHHHHHH---C--SSSEEEEEC------------------------TTCBCHHHHHHHH-HHTTTSCCCCEESCBCSTTH
T ss_pred HHHHHhc---C--CCeEEEEec------------------------CcCCCHHHHHHHH-HHhhhcCcceeecCcccccc
Confidence 5555554 6 689999999 5778999999985 45799999999999986 57
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|+++ .+|. ++
T Consensus 250 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~kia~~A~~~gv~v-~~h~--~~-- 321 (388)
T 4h83_A 250 KRSMRDVRYQGS--VPVCAGQTE-FSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQM-GHHE--EP-- 321 (388)
T ss_dssp HHHHHHHHHHSS--SCEEECTTC-SSHHHHHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHHTTCEE-CCCS--CH--
T ss_pred hHHHHHHHhhcC--CCccCCccc-cChHhHHHHHHcCCCCeEeecceeCCCHHHHHHHHHHHHHCCCEE-EecC--HH--
Confidence 999999999998 999999985 679999999999999999999999999999999999999999985 4552 33
Q ss_pred HHHHHHHhhhc
Q 013317 389 TFIADLSVGLA 399 (445)
Q Consensus 389 ~~~~~la~a~~ 399 (445)
+..+|++.++.
T Consensus 322 ~~~~h~~aa~~ 332 (388)
T 4h83_A 322 QVSTHLLASQP 332 (388)
T ss_dssp HHHHHHHHHST
T ss_pred HHHHHHHHHhh
Confidence 34577777654
No 45
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=100.00 E-value=7.4e-47 Score=381.39 Aligned_cols=304 Identities=19% Similarity=0.264 Sum_probs=238.2
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +++++|+|+|++|++|||.++.. +.|++++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~~~~~~~~~~~ 65 (366)
T 1tkk_A 1 MKIIRIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPPT---------------LVITGDSMDSIESA 65 (366)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCC---------------TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecCeeEEEeeEEEEEEEECCCCEEEEEecCC---------------CCcCCCCHHHHHHH
Confidence 699999998762 3433 25799999999999999965432 12567778888888
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
|++.++|.|+|+||.+++.+|+.|.+.+.+ ..+|++|||+||||+.||.+|+|||+||| | .+++
T Consensus 66 l~~~l~~~l~g~~~~~~~~~~~~l~~~~~~------------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~ 129 (366)
T 1tkk_A 66 IHHVLKPALLGKSLAGYEAILHDIQHLLTG------------NMSAKAAVEMALYDGWAQMCGLPLYQMLG---G-YRDT 129 (366)
T ss_dssp HHHTHHHHHTTCBGGGHHHHHHHHHHSSSS------------CHHHHHHHHHHHHHHHHHHTTSBHHHHHT---C-CCSE
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHHHHhcC------------CHHHHHHHHHHHHHHHHHHcCCCHHHHhC---C-CCCc
Confidence 888899999999999999999999832221 24799999999999999999999999999 8 5677
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|++. +++++ +. ++..+++.+...++|+.+| .|+|. .+.+.+.+.+
T Consensus 130 v~~~~--~~~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~~d~~~v 175 (366)
T 1tkk_A 130 LETDY--TVSVN-------SP---------EEMAADAENYLKQGFQTLK----IKVGK------------DDIATDIARI 175 (366)
T ss_dssp EEBCE--EECSC-------CH---------HHHHHHHHHHHHHTCCEEE----EECCS------------SCHHHHHHHH
T ss_pred eeeeE--EecCC-------CH---------HHHHHHHHHHHHcCCCeEE----EEeCC------------CCHHHHHHHH
Confidence 87743 33222 11 1234556666666776553 45441 1223345555
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhc--CCeeEEECCCCcc
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD--HPIVSIEDPFDQD 307 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~--~~i~~iEdP~~~~ 307 (445)
+++|+++ | +++.|++|+ |++||.+++++++. .+++ +++.|||||++++
T Consensus 176 ~avr~a~---g--~~~~l~vDa------------------------n~~~~~~~a~~~~~-~l~~~~~~i~~iEqP~~~~ 225 (366)
T 1tkk_A 176 QEIRKRV---G--SAVKLRLDA------------------------NQGWRPKEAVTAIR-KMEDAGLGIELVEQPVHKD 225 (366)
T ss_dssp HHHHHHH---C--SSSEEEEEC------------------------TTCSCHHHHHHHHH-HHHHTTCCEEEEECCSCTT
T ss_pred HHHHHHh---C--CCCeEEEEC------------------------CCCCCHHHHHHHHH-HHhhcCCCceEEECCCCcc
Confidence 5555554 5 579999999 46688999999854 5888 9999999999999
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+ ++++++++++++.+++|++++|++++||+|++++++++|+++|++++++|+ .||.
T Consensus 226 d~~~~~~l~~~~~--ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~ 301 (366)
T 1tkk_A 226 DLAGLKKVTDATD--TPIMADES-VFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVGSM-IETK 301 (366)
T ss_dssp CHHHHHHHHHHCS--SCEEECTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCS-SCCH
T ss_pred cHHHHHHHHhhCC--CCEEEcCC-CCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEecCc-cccH
Confidence 9999999999988 99999998 477999999999999999999999999999999999999999999988885 7998
Q ss_pred hHHHHHHHhhhcCCccc
Q 013317 388 DTFIADLSVGLATGQIK 404 (445)
Q Consensus 388 ~~~~~~la~a~~~~~~~ 404 (445)
++.+++++++...+.+.
T Consensus 302 i~~~a~~~laaa~~~~~ 318 (366)
T 1tkk_A 302 LGITAAAHFAASKRNIT 318 (366)
T ss_dssp HHHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHHHHcCCCCc
Confidence 88776666654444433
No 46
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=100.00 E-value=4.8e-47 Score=382.04 Aligned_cols=296 Identities=20% Similarity=0.229 Sum_probs=226.5
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +..++|+|+||+|++|||++... +.|++++..++...
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 69 (365)
T 3ik4_A 5 TTIQAISAEAINLPLTEPFAIASGAQAVAANVLVKVQLADGTLGLGEAAPF---------------PAVSGETQTGTSAA 69 (365)
T ss_dssp TBEEEEEEEEEEEEBSCC--------CEEEEEEEEEEETTSCEEEEEECCC---------------CTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEEecCCCeEccCeEEEeeeEEEEEEEECCCCEEEEecccC---------------CCcCcCCHHHHHHH
Confidence 799999998773 2333 25699999999999999965321 12567777777777
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+ +.+.|.|+|+||.+++++|+.|.+.+. ...+|++|||+||||+.||.+|+|||+||| |.. ++
T Consensus 70 l-~~l~~~l~G~d~~~~~~~~~~l~~~~~------------~~~~a~said~ALwDl~gk~~g~Pl~~LLG---g~~-~~ 132 (365)
T 3ik4_A 70 I-ERLQSHLLGADVRGWRKLAAMLDHAEH------------EAAAARCGLEMAMLDALTRHYHMPLHVFFG---GVS-KQ 132 (365)
T ss_dssp H-HHHGGGTTTCBGGGHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SE
T ss_pred H-HHHHHHHcCCCccCHHHHHHHHHHHhc------------ccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cc
Confidence 7 479999999999999999999983221 124799999999999999999999999999 875 56
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|+ |.+++.+ .+++.++++.+...+||+++ |.|+|. .+.+.+.+.+
T Consensus 133 v~~--~~~~~~~----------------~~e~~~~~a~~~~~~G~~~i----K~Kvg~------------~~~~~d~~~v 178 (365)
T 3ik4_A 133 LET--DMTITAG----------------DEVHAAASAKAILARGIKSI----KVKTAG------------VDVAYDLARL 178 (365)
T ss_dssp EEB--CEEECCS----------------CHHHHHHHHHHHHHTTCCCE----EEECCS------------SCHHHHHHHH
T ss_pred eee--eEEecCC----------------CHHHHHHHHHHHHHcCCCEE----EEEeCC------------CCHHHHHHHH
Confidence 665 3332211 11223455555555667655 345542 1122334445
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhh--hcCCeeEEECCCCcc
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI--SDHPIVSIEDPFDQD 307 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~--~~~~i~~iEdP~~~~ 307 (445)
++||+++ +++.|++|+ |+.||.+++++++ +.+ ++|++.|||||++++
T Consensus 179 ~avr~~~------~~~~l~vDa------------------------N~~~~~~~A~~~~-~~L~~~~~~i~~iEeP~~~~ 227 (365)
T 3ik4_A 179 RAIHQAA------PTAPLIVDG------------------------NCGYDVERALAFC-AACKAESIPMVLFEQPLPRE 227 (365)
T ss_dssp HHHHHHS------SSCCEEEEC------------------------TTCCCHHHHHHHH-HHHHHTTCCEEEEECCSCTT
T ss_pred HHHHHhC------CCCeEEEEC------------------------CCCCCHHHHHHHH-HHHhhCCCCceEEECCCCcc
Confidence 4444443 468999999 5778999999875 457 889999999999999
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+ ++++++++++++.+++|++|||+++ ||||++++++++|+++|+++++++ +.|+.
T Consensus 228 d~~~~~~l~~~~~--ipIa~dE~-~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~i~~~A~~~gi~~~~~~-~~es~ 302 (365)
T 3ik4_A 228 DWAGMAQVTAQSG--FAVAADES-ARSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQAAGLGLMIGG-MVESI 302 (365)
T ss_dssp CHHHHHHHHHHSS--SCEEESTT-CSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECC-SSCCH
T ss_pred cHHHHHHHHhhCC--CCEEECCC-CCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHHHHHHHHHcCCeEEecC-CcccH
Confidence 9999999999998 99999998 5779999999999999999999999 999999999999999999998777 46887
Q ss_pred hHH--HHHHHhhhc
Q 013317 388 DTF--IADLSVGLA 399 (445)
Q Consensus 388 ~~~--~~~la~a~~ 399 (445)
++. .+|||.+++
T Consensus 303 ig~aa~~hlaaa~p 316 (365)
T 3ik4_A 303 LAMSFSANLAAGNG 316 (365)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCC
Confidence 654 556555543
No 47
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=100.00 E-value=8.7e-47 Score=385.43 Aligned_cols=318 Identities=12% Similarity=0.072 Sum_probs=230.5
Q ss_pred cceeEEEEEEEecC----CCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhh
Q 013317 2 VTINAVKARQIFDS----RGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPA 77 (445)
Q Consensus 2 ~~I~~v~~~~i~~~----~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~ 77 (445)
|||++|+++.+... .++..++|+|+||+|++|||++.... +. ..+....|++.++|.
T Consensus 1 MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~~G~GE~~~~~----------------~~---~~~~~~~i~~~l~p~ 61 (412)
T 4e4u_A 1 MKIVSLETHIVAVPPPHVGGMYWIFVKLKTDDGIEGVGEIYSAT----------------FG---PKAMAPIIDDVFERH 61 (412)
T ss_dssp CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSCEEEEEECCCS----------------SC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEccCCCccCCCceEEEEEEECCCCEEEEeecCCC----------------CC---HHHHHHHHHHHhHHH
Confidence 69999999988532 23567999999999999999764311 11 234445677788999
Q ss_pred ccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEe
Q 013317 78 LVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNV 157 (445)
Q Consensus 78 LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~ 157 (445)
|+|+||.+++++|+.|++... +.+......+|+|||||||||+.||.+|+|||+||| |+.++++|++ .+
T Consensus 62 LiG~dp~~~e~~~~~l~~~~~------~~~~~~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y--as 130 (412)
T 4e4u_A 62 LLNRDPHHVERLFRQAYSSGF------TQRPDLTMMGVVSGLEMACWDIIGKAAAKPVYELLG---GRIHERLRSY--TY 130 (412)
T ss_dssp TTTSCTTCHHHHHHHHHHTTT------CCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCCCSSEEEE--EE
T ss_pred hCCCChhHHHHHHHHHHHhhh------hcCCcchHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCcCCeeEEE--Ee
Confidence 999999999999999973211 111222335799999999999999999999999999 9877888874 33
Q ss_pred ecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCC---ccCchHHHHHHHH
Q 013317 158 INGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPN---IQESYEGFELLKT 234 (445)
Q Consensus 158 ~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~---~~~~~~~l~~v~~ 234 (445)
+..+. ...... +..+++..+++.+...+||+++ |.|.|.... +. ++..+. .+.+.+.+++||+
T Consensus 131 ~~~~~-~~~~~~------~~~~e~~~~~a~~~~~~G~~~i----KlK~g~~~~--~~-~g~~~~~~~~~~d~~~v~avR~ 196 (412)
T 4e4u_A 131 LYPKN-AKGEYD------YDDPDLAAECAAENVKLGFTAV----KFDPAGPYT--AY-SGHQLSLEVLDRCELFCRRVRE 196 (412)
T ss_dssp CCCBC-TTSCBC------SSCHHHHHHHHHHHHHHTCSEE----EECCSCCCB--TT-CCBCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCc-cccccc------CCCHHHHHHHHHHHHHcCCCEE----EECCCCCCc--cc-cccccchhhHHHHHHHHHHHHH
Confidence 21110 000000 0112334556666666778765 345542110 01 111221 2223444444444
Q ss_pred HHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHH
Q 013317 235 AIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAE 314 (445)
Q Consensus 235 ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~ 314 (445)
+ +| +++.|++|+ |++||.++++++. +.++++++.|||||++++|++++++
T Consensus 197 a---~G--~d~~l~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~d~~~~~~ 246 (412)
T 4e4u_A 197 A---VG--SKADLLFGT------------------------HGQMVPSSAIRLA-KRLEKYDPLWFEEPVPPGQEEAIAQ 246 (412)
T ss_dssp H---HT--TSSEEEECC------------------------CSCBCHHHHHHHH-HHHGGGCCSEEECCSCSSCHHHHHH
T ss_pred H---hC--CCCeEEEEC------------------------CCCCCHHHHHHHH-HHhhhcCCcEEECCCChhhHHHHHH
Confidence 4 45 579999999 4678999999874 5689999999999999999999999
Q ss_pred HHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHH
Q 013317 315 LTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADL 394 (445)
Q Consensus 315 L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~l 394 (445)
|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|+ .++.++.++.+
T Consensus 247 l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~v~-~h~-~~s~i~~aa~~ 321 (412)
T 4e4u_A 247 VAKHTS--IPIATGERL-TTKYEFHKLLQAGGASILQLNVARVGGLLEAKKIATLAEVHYAQIA-PHL-YNGPVGAAASI 321 (412)
T ss_dssp HHHTCS--SCEEECTTC-CHHHHHHHHHHTTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCEEC-CCC-CSCHHHHHHHH
T ss_pred HHhhCC--CCEEecCcc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEE-ecC-CCcHHHHHHHH
Confidence 999998 999999985 6799999999999999999999999999999999999999999975 553 35766654444
Q ss_pred Hhhh
Q 013317 395 SVGL 398 (445)
Q Consensus 395 a~a~ 398 (445)
+++.
T Consensus 322 hlaa 325 (412)
T 4e4u_A 322 QLAT 325 (412)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 48
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=100.00 E-value=3.6e-47 Score=386.54 Aligned_cols=310 Identities=17% Similarity=0.150 Sum_probs=225.0
Q ss_pred CcceeEEEEEEEecC---CCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHH------
Q 013317 1 MVTINAVKARQIFDS---RGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVN------ 71 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~---~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~------ 71 (445)
||||++|+++.+.-. ..+.+++|+|+||+|++|||++... .......++
T Consensus 9 ~mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~~G~GE~~~~----------------------~~~~~~~~~~~~~~~ 66 (394)
T 3mkc_A 9 VAPIKSIEFIPVNYQASNWSQNTVVVKVTDENGVYGLGEADGS----------------------PDAILAYANIETEHK 66 (394)
T ss_dssp CCCEEEEEEEEEEEC----CEEEEEEEEEETTSCEEEEEECSC----------------------HHHHHHHHTCCCCBT
T ss_pred CCeEEEEEEEEEecCCCCCCccEEEEEEEECCCCeEEEEecCc----------------------HHHHHHHHhcccchh
Confidence 689999999988422 2346799999999999999965431 111111222
Q ss_pred --HhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 72 --SIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 72 --~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+.++|.|+|+||.+++++|+.|++... | .|+++...+|++||||||||+.||.+|+|||+||| |..+++
T Consensus 67 ~~~~l~p~liG~dp~~~e~~~~~l~~~~~-----~-~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~ 137 (394)
T 3mkc_A 67 WLTNITEKAIGRLPIEINAIWDAMYDATQ-----W-QGMRGLGMFALSGIDMALYDLAGKQLGVPAYQLLG---GTNKDK 137 (394)
T ss_dssp TBCCTTTTTTTSCTTCHHHHHHHHHHHTH-----H-HHSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSE
T ss_pred hHHHHHHHhCCCChhHHHHHHHHHHHhhh-----h-cCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCcCCe
Confidence 248999999999999999999983321 0 11233446899999999999999999999999999 987777
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHh-hcCCCCcccCCCCCCCCCccCchHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKK-KYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~-k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
+|+ |.++..... ...+.++ ++ ++..+++.+...+||+++ |. |+|.. ..+.+.+.+.
T Consensus 138 v~~--y~s~~~~~~--~~~~~~~-~~----~~~~~~a~~~~~~G~~~~----K~~k~g~~----------~~~~~~d~e~ 194 (394)
T 3mkc_A 138 VHP--YLTLYPAIP--VDASLDV-AI----KGYAPLLEKAKAHNIRAV----KVCVPIKA----------DWSTKEVAYY 194 (394)
T ss_dssp ECC--EEECCCSCC---CCCHHH-HH----HHHHHHHHHHHHTTCSEE----EEECCTTC----------CCCHHHHHHH
T ss_pred eEE--EEecCCcCC--CCcchhh-hH----HHHHHHHHHHHHcCCCEE----EeCccCCC----------ccCHHHHHHH
Confidence 776 543221010 0000000 00 012234444445566554 33 44410 0122334455
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCc-ChHHHHHHHHHhhhcCCeeEEECCCCcc
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKV-SGDGLKNVYRSFISDHPIVSIEDPFDQD 307 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~-t~~~~i~~~~~~~~~~~i~~iEdP~~~~ 307 (445)
+++||+++ | +++.|++|+ |++| |.++++++. +.++++++.|||||++++
T Consensus 195 v~avR~a~---G--~d~~l~vDa------------------------N~~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~ 244 (394)
T 3mkc_A 195 LRELRGIL---G--HDTDMMVDY------------------------LYRFTDWYEVARLL-NSIEDLELYFAEATLQHD 244 (394)
T ss_dssp HHHHHHHH---C--SSSEEEEEC------------------------TTCCCCHHHHHHHH-HHTGGGCCSEEESCSCTT
T ss_pred HHHHHHHh---C--CCCeEEEeC------------------------CCCCCCHHHHHHHH-HHhhhcCCeEEECCCCch
Confidence 55555544 5 579999999 5678 899999985 567999999999999999
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|++ ++.
T Consensus 245 d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~~-~s~ 319 (394)
T 3mkc_A 245 DLSGHAKLVENTR--SRICGAEMS-TTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANNVQVM-PHNW-KTG 319 (394)
T ss_dssp CHHHHHHHHHHCS--SCBEECTTC-CHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEC-CCCC-SCH
T ss_pred hHHHHHHHHhhCC--CCEEeCCCC-CCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe-ecCC-CcH
Confidence 9999999999998 999999985 6699999999999999999999999999999999999999999986 5544 887
Q ss_pred hHH--HHHHHhhhc
Q 013317 388 DTF--IADLSVGLA 399 (445)
Q Consensus 388 ~~~--~~~la~a~~ 399 (445)
++. .+||+.++.
T Consensus 320 i~~aa~~hlaaa~p 333 (394)
T 3mkc_A 320 ITSAAAIHYQFAVG 333 (394)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCC
Confidence 765 456655543
No 49
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=100.00 E-value=1.2e-46 Score=384.25 Aligned_cols=319 Identities=15% Similarity=0.163 Sum_probs=225.0
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGK 81 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 81 (445)
||||+|+...+- .++..++|+|+||+|++|||++.. + .++....|.+.++|.|+|+
T Consensus 4 mkIt~v~~~~~~--~~~~~~~V~v~td~G~~G~GE~~~--------------------~--~~~~~~~i~~~l~p~liG~ 59 (410)
T 3dip_A 4 PRITALRTIRLP--ERPKLIWVEVETEDGLTGLGETFR--------------------G--AQAVEAVLHEQTAPAIIGR 59 (410)
T ss_dssp CBEEEEEEEEET--TEEEEEEEEEEETTSCEEEEEEES--------------------C--HHHHHHHHHHTHHHHHTTS
T ss_pred CeEEEEEEEEEC--CCCCEEEEEEEECCCCEEEEeCCC--------------------C--hHHHHHHHHHHHHHHhcCC
Confidence 799999987763 345679999999999999987321 1 1344456777899999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCC
Q 013317 82 DPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGG 161 (445)
Q Consensus 82 d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg 161 (445)
||.+++++|+.|+ . . .++|++++...+|+|||||||||+.||.+|+|||+||| |+.++++|++.+....+|
T Consensus 60 dp~~~e~~~~~~~-~--~---~~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~yas~~~~~g 130 (410)
T 3dip_A 60 AAENITSISSELL-N--P---YVGFGSSSAEVRAASAVDIALWDLAGQRAGVPLHVALG---GAARDRVPVYATCAGYDF 130 (410)
T ss_dssp BTTCHHHHHHHHT-C--C---SSSCSSCCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEEEEEECTTTC
T ss_pred CcchHHHHHHHHH-H--H---HHhhCCccHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CCcCCceeEEEecccccc
Confidence 9999999999997 2 1 12344455566899999999999999999999999999 988888888543211112
Q ss_pred ccCCCcc-------cccceeeccC--CcccHHHHHHHHHHHHHHHHHH-H---HhhcCCCCcccCCCCCCCC--CccCch
Q 013317 162 SHADNKL-------AMQEFMILPI--GASTFKEAMKMGVEVYHHLKAV-I---KKKYGQDATNVGDEGGFAP--NIQESY 226 (445)
Q Consensus 162 ~~~~~~~-------~~~e~~~~p~--~~~~~~ea~~~~~~~~~~~k~~-l---k~k~G~~~~~~~~~g~~~~--~~~~~~ 226 (445)
....... +.+..+--|. .....+.+.+...+||+++|.. + +.|.| .... +++.+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~~~~~~~~K~G----------~~~~~~~~~~d~ 200 (410)
T 3dip_A 131 NTSLGGRRSIGSAELSTGPYDDQVAFMRDAGVLAESLVAEGYAAMKIWPFDDFASITP----------HHISLTDLKDGL 200 (410)
T ss_dssp ----------------------------CHHHHHHHHHHTTCSEEEECTTHHHHTTCT----------TCCCHHHHHHHH
T ss_pred cccccccccccccccccccccchhhhhhhHHHHHHHHHHcCCCEEEECCccCcccccc----------CcCCHHHHHHHH
Confidence 1000000 0000000000 0011222333444566655310 0 00322 1101 112234
Q ss_pred HHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECC-CC
Q 013317 227 EGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDP-FD 305 (445)
Q Consensus 227 ~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP-~~ 305 (445)
+.+++||+++ | +++.|++|+ |++||.++++++. +.++++++.||||| ++
T Consensus 201 e~v~avR~a~---g--~d~~l~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~ 250 (410)
T 3dip_A 201 EPFRKIRAAV---G--QRIEIMCEL------------------------HSLWGTHAAARIC-NALADYGVLWVEDPIAK 250 (410)
T ss_dssp HHHHHHHHHH---T--TSSEEEEEC------------------------TTCBCHHHHHHHH-HHGGGGTCSEEECCBSC
T ss_pred HHHHHHHHHc---C--CCceEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCCC
Confidence 4555555544 5 579999999 4678999999874 56899999999999 89
Q ss_pred ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 013317 306 QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGE 385 (445)
Q Consensus 306 ~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~e 385 (445)
++|++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|+++++++ +
T Consensus 251 ~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~-~-- 324 (410)
T 3dip_A 251 MDNIPAVADLRRQTR--APICGGENL-AGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPHX-T-- 324 (410)
T ss_dssp TTCHHHHHHHHHHHC--CCEEECTTC-CSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEECS-S--
T ss_pred cccHHHHHHHHhhCC--CCEEecCCc-CCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeeeC-c--
Confidence 999999999999998 999999984 7799999999999999999999999999999999999999999987554 4
Q ss_pred ChhH--HHHHHHhhhc
Q 013317 386 TEDT--FIADLSVGLA 399 (445)
Q Consensus 386 t~~~--~~~~la~a~~ 399 (445)
+.++ +.+||+.++.
T Consensus 325 s~i~~aa~~hlaaa~p 340 (410)
T 3dip_A 325 GPVALMAGLHLALHAP 340 (410)
T ss_dssp CHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHhCC
Confidence 5554 5566666543
No 50
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=100.00 E-value=1.2e-46 Score=383.18 Aligned_cols=311 Identities=17% Similarity=0.147 Sum_probs=240.5
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||||++|+++.+. .+.+ +..++|+|+| +|++|||++.... .+.|++++..++..
T Consensus 6 ~MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~lV~v~t-~G~~G~GE~~~~~-------------~p~~~~et~~~~~~ 71 (400)
T 3mwc_A 6 SARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIRE-GDLFGYGESAPFE-------------EPFYLGETLETTKV 71 (400)
T ss_dssp CCCCCEEEEEEEEEECSSCCCBTTBCCCEEEEEEEEEEE-TTEEEEEEECCBS-------------STTSTTCBHHHHHH
T ss_pred CcEEEEEEEEEEeccccCceEccCceEeeeeEEEEEEEE-CCeEEEEecccCC-------------CCccccCcHHHHHH
Confidence 3799999998873 2333 3569999999 9999999553211 12377888888888
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhC----
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAG---- 144 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G---- 144 (445)
.|++.++|.|+|+||.+++++|+.|.+.+. + ..+|++|||+||||+.||.+|+|||+||| |
T Consensus 72 ~i~~~l~p~liG~d~~~~e~~~~~l~~~~~----------g--~~~A~said~ALwDl~gk~~g~Pl~~LLG---G~~~~ 136 (400)
T 3mwc_A 72 ILKNHLLPMILGKEPLSIEEFNHLIKNGIR----------G--NHFARCGVENAYWDLIAKKNKISLKAMIE---KKMKN 136 (400)
T ss_dssp HHHHTHHHHHTTCCCSSHHHHHHHHHHSCC----------S--CHHHHHHHHHHHHHHHHHHTTCBHHHHHH---HHHHH
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHHhc----------C--CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---Ccccc
Confidence 898889999999999999999999982121 1 13699999999999999999999999999 7
Q ss_pred --------CCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCC
Q 013317 145 --------NKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEG 216 (445)
Q Consensus 145 --------~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g 216 (445)
..++++|+ |.++ |... .. .+++..+++.+...+||+++| .|++
T Consensus 137 ~~~~~~~~~~r~~v~~--~~s~--g~~~--~~---------~~e~~~~~a~~~~~~G~~~iK----lKv~---------- 187 (400)
T 3mwc_A 137 LGVKQEYLASNNYIES--GAAL--GIPE--DG---------RIETLIHQVEESLQEGYRRIK----IKIK---------- 187 (400)
T ss_dssp TTCCGGGGCBCSEEEB--CEEE--CCCT--TC---------CHHHHHHHHHHHHHHTCSCEE----EECB----------
T ss_pred cccccccccCCCeEEe--eEEe--ccCC--CC---------CHHHHHHHHHHHHHcCCCEEE----EEeC----------
Confidence 66677776 3332 2110 00 012334556555556676553 3432
Q ss_pred CCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCC
Q 013317 217 GFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 296 (445)
Q Consensus 217 ~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~ 296 (445)
+ +.+.+.+++||+++ | +++.|++|+ |++||.++ ++++ +.+++++
T Consensus 188 ---~--~~d~~~v~avR~a~---G--~~~~L~vDa------------------------N~~w~~~~-~~~~-~~l~~~~ 231 (400)
T 3mwc_A 188 ---P--GWDVEPLQETRRAV---G--DHFPLWTDA------------------------NSSFELDQ-WETF-KAMDAAK 231 (400)
T ss_dssp ---T--TBSHHHHHHHHHHH---C--TTSCEEEEC------------------------TTCCCGGG-HHHH-HHHGGGC
T ss_pred ---c--chHHHHHHHHHHhc---C--CCCEEEEeC------------------------CCCCCHHH-HHHH-HHHHhcC
Confidence 1 23477777777766 5 579999999 46788888 8875 5689999
Q ss_pred eeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCc
Q 013317 297 IVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWG 376 (445)
Q Consensus 297 i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~ 376 (445)
+.|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++
T Consensus 232 i~~iEqP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~ 308 (400)
T 3mwc_A 232 CLFHEQPLHYEALLDLKELGERIE--TPICLDESL-ISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIK 308 (400)
T ss_dssp CSCEESCSCTTCHHHHHHHHHHSS--SCEEESTTC-CSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCE
T ss_pred CCEEeCCCChhhHHHHHHHHhhCC--CCEEEeCCc-CCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCE
Confidence 999999999999999999999998 999999985 67999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCChhHHHHHHHhhhcCCccccCCCC
Q 013317 377 VMASHRSGETEDTFIADLSVGLATGQIKTGAPC 409 (445)
Q Consensus 377 ~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~~ 409 (445)
+++++ +.|+.++..+.++++..+.+..++++.
T Consensus 309 ~~~~~-~~es~i~~aa~~hlaa~~~~~~~~d~~ 340 (400)
T 3mwc_A 309 LWGGT-MPESGLGARFLISLASFRGFVFPADVA 340 (400)
T ss_dssp EEECC-SCCCHHHHHHHHHHTTBTTBCSCBCCC
T ss_pred EEecC-CCCCHHHHHHHHHHHcCCCCcceeccC
Confidence 98777 579988877766666533444444443
No 51
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=100.00 E-value=7.2e-47 Score=382.97 Aligned_cols=303 Identities=14% Similarity=0.217 Sum_probs=219.2
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccC
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
|||||+|+.... .+.++|+|+||+|++|||+++. |. .......+.+.|+|.|+|
T Consensus 22 ~mkIt~v~~~~~-----~~~~~V~v~Td~G~~G~GE~~~------------------~~---~~~~~~~i~~~l~p~LiG 75 (388)
T 3tcs_A 22 SMKLKAIETFTN-----DAVGFVRVTTQDGAQGWGQVST------------------YH---ADITCTVLHRQVAPWMLG 75 (388)
T ss_dssp -CBEEEEEEEEC-----SSCEEEEEEETTSCEEEEECCS------------------SS---HHHHHHHHHHHTHHHHTT
T ss_pred ccEEEEEEEEEe-----CCeEEEEEEECCCCEEEEeccC------------------Cc---cHHHHHHHHHHHHHHhCC
Confidence 589999987653 2469999999999999997643 11 123345577889999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecC
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVING 160 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~g 160 (445)
+||.+++++|+.|++..... .+.....|++||||||||+.||.+|+|||+||| |.. +++|+ |.+..+
T Consensus 76 ~d~~~~e~l~~~~~~~~~~~-------~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---g~~-~~v~~--y~s~~~ 142 (388)
T 3tcs_A 76 QDITDLDDLLDIVTEREHKF-------PGSYLRRAMAGVDTAIWDLRGKQQGKPVAEVLG---GTP-GLIRA--YASSMK 142 (388)
T ss_dssp SBCTTHHHHHHHHHHHTTTC-------CBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC-EEEEE--EEECCC
T ss_pred CCcccHHHHHHHHHHhhhcc-------CCcHHHHHHHHHHHHHHHHHHhHcCCcHHHHhC---CCC-CceEE--EEecCc
Confidence 99999999999998322110 122334699999999999999999999999999 874 55655 543211
Q ss_pred CccCCCcccccceeeccCCcccHHHHHHH-HHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhc
Q 013317 161 GSHADNKLAMQEFMILPIGASTFKEAMKM-GVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKG 239 (445)
Q Consensus 161 g~~~~~~~~~~e~~~~p~~~~~~~ea~~~-~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~ 239 (445)
. ..+. .+..+++.+. ..+||+++ |.|+|... +.+ .....+.+.+.++++|+++
T Consensus 143 ~-----~~~~---------~~~~~~~~~~~~~~Gf~~~----K~KvG~~~---~~d--~~~~~~~~~~~v~avReav--- 196 (388)
T 3tcs_A 143 R-----DITP---------RDEAERLKRLRDTQGFTAF----KVRAGAEV---GRN--RDEWPGRTEEIIPTMRREL--- 196 (388)
T ss_dssp S-----SSCH---------HHHHHHHHHHHHHHCCCEE----EEECSCTT---CTT--CCSSTTHHHHHHHHHHHHH---
T ss_pred C-----CCCh---------HHHHHHHHHHHHhcCCCEE----EEccCCCc---ccc--cccchhHHHHHHHHHHHHh---
Confidence 0 0110 1122333332 24566655 45655310 000 0000111234555555554
Q ss_pred CCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHh
Q 013317 240 GYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKI 319 (445)
Q Consensus 240 G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~ 319 (445)
| +++.|++|+ |++||.++++++. +.++++++.|||||++++|++++++|++++
T Consensus 197 G--~d~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~ 249 (388)
T 3tcs_A 197 G--DDVDLLIDA------------------------NSCYTPDRAIEVG-HMLQDHGFCHFEEPCPYWELAQTKQVTDAL 249 (388)
T ss_dssp C--SSSEEEEEC------------------------TTCCCHHHHHHHH-HHHHHTTCCEEECCSCTTCHHHHHHHHHHC
T ss_pred C--CCCeEEEeC------------------------CCCcCHHHHHHHH-HHHhhcCCeEEECCCCccCHHHHHHHHHhc
Confidence 5 589999999 5678999999975 568999999999999999999999999999
Q ss_pred CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh-hHHHHHHHhhh
Q 013317 320 GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE-DTFIADLSVGL 398 (445)
Q Consensus 320 ~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~-~~~~~~la~a~ 398 (445)
+ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++ +|.+.++. ..+.+||+.++
T Consensus 250 ~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~d~~~~GGit~a~kia~~A~~~gv~~~-~h~~~~~~~~~a~~hl~aa~ 325 (388)
T 3tcs_A 250 D--IDVTGGEQD-CDLPTWQRMIDMRAVDIVQPDILYLGGICRTLRVVEMARAAGLPVT-PHCANWSLVTLFTMHLLRAI 325 (388)
T ss_dssp S--SCEEECTTC-CCHHHHHHHHHHTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCCBC-CCCCSTTTHHHHHHHHHTTC
T ss_pred C--CCEEcCCcc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEE-ecCCCcHHHHHHHHHHHHhC
Confidence 8 999999984 7799999999999999999999999999999999999999999986 45444432 23455666665
Q ss_pred c
Q 013317 399 A 399 (445)
Q Consensus 399 ~ 399 (445)
.
T Consensus 326 p 326 (388)
T 3tcs_A 326 P 326 (388)
T ss_dssp T
T ss_pred C
Confidence 4
No 52
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=100.00 E-value=5e-47 Score=384.65 Aligned_cols=297 Identities=20% Similarity=0.251 Sum_probs=230.4
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. ++.| +..++|+|+||+|++|||++... +.|++++..++...
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 69 (389)
T 3s5s_A 5 TLIRRVSIEALDIPLHEPFGIAGGAQERAANLLVTVELADGTLGFGEAAPL---------------PAFNGETQDGSRAA 69 (389)
T ss_dssp TBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCC---------------HHHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEEEecCCceeccCceEEeeeEEEEEEEECCCCEEEEeccCC---------------CCcCccCHHHHHHH
Confidence 799999998772 3444 35699999999999999965321 12456667777776
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+ +.++|.|+|+||.+++++|+.|.+.+.+ ...+|++|||+||||+.||.+|+|||+||| |.. ++
T Consensus 70 l-~~l~~~l~G~d~~~~~~~~~~l~~~~~~-----------~~~~A~said~ALwDl~gk~~g~Pl~~LLG---g~~-~~ 133 (389)
T 3s5s_A 70 A-VSLREAVVGSDARAWRAVARALREASGG-----------GAGAARCAIETAILDALTKRAGMPLWAFFG---GSG-TA 133 (389)
T ss_dssp H-HHTHHHHTTSBGGGHHHHHHHHHHHHTT-----------CCHHHHHHHHHHHHHHHHHTTTCBHHHHTT---CSC-SE
T ss_pred H-HHHHHHhcCCCccCHHHHHHHHHHhhcc-----------ChHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cc
Confidence 7 4699999999999999999999833321 113799999999999999999999999999 875 56
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|+ +.+++.+ .+++.++++.+...+||+++ |.|+|. .+.+.+.+.+
T Consensus 134 v~~--~~t~~~~----------------~~e~~~~~a~~~~~~G~~~i----KlKvg~------------~~~~~d~~~v 179 (389)
T 3s5s_A 134 LTT--DITITTG----------------SPERAEEAARRAAAMGFRAL----KVKVGG------------RLAASDPARI 179 (389)
T ss_dssp EEC--CEEECSS----------------CSHHHHHHHHHHHHHTCCEE----EEECCG------------GGTTTHHHHH
T ss_pred eEE--EeeecCC----------------CHHHHHHHHHHHHHcCCCeE----EEEecC------------CChHHHHHHH
Confidence 665 3332211 12334556666666777665 456552 1123345566
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhh--hcCCeeEEECCCCcc
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI--SDHPIVSIEDPFDQD 307 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~--~~~~i~~iEdP~~~~ 307 (445)
++||+++ +++.|+||+ |+.||.+++++++ +.+ ++|++.|||||++++
T Consensus 180 ~avR~~~------~~~~L~vDa------------------------N~~w~~~~A~~~~-~~L~~~~~~i~~iEeP~~~~ 228 (389)
T 3s5s_A 180 EAIHAAA------PGASLILDG------------------------NGGLTAGEALALV-AHARRLGADVALLEQPVPRD 228 (389)
T ss_dssp HHHHHHC------TTCEEEEEC------------------------TTCSCHHHHHHHH-HHHHHTTCEEEEEECCSCTT
T ss_pred HHHHHhC------CCCeEEEEC------------------------CCCCCHHHHHHHH-HHHhhCCCCeEEEECCCCcc
Confidence 6565554 568999999 5778999999885 457 789999999999999
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++|||+++ ||||++++++++|+++|+++++++ +.|+.
T Consensus 229 d~~~~~~l~~~~~--iPIa~dEs~-~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~i~~~A~~~gi~~~~~~-~~es~ 303 (389)
T 3s5s_A 229 DWDGMKEVTRRAG--VDVAADESA-ASAEDVLRVAAERAATVVNIKLMK-GGIAEALDIAAVARAAGLGLMIGG-MVESV 303 (389)
T ss_dssp CHHHHHHHHHHSS--SCEEESTTC-SSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHHHHHHHHHTTCEEEECC-SSCCH
T ss_pred cHHHHHHHHhhCC--CCEEECCCC-CCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHcCCeEEecC-CcccH
Confidence 9999999999998 999999985 679999999999999999999999 999999999999999999998777 46887
Q ss_pred hH--HHHHHHhhhc
Q 013317 388 DT--FIADLSVGLA 399 (445)
Q Consensus 388 ~~--~~~~la~a~~ 399 (445)
++ +.+||+.+++
T Consensus 304 ig~aa~~hlaaa~p 317 (389)
T 3s5s_A 304 LAMTASACFAAGLG 317 (389)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhCC
Confidence 65 4556655543
No 53
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=2.6e-47 Score=387.86 Aligned_cols=300 Identities=17% Similarity=0.187 Sum_probs=234.2
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||||++|+++.+. .+.+ +++++|+|+|++|++|||+++... .+.|.++++.+++.
T Consensus 19 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~G~GE~~~~~-------------~~~~~~e~~~~~~~ 85 (393)
T 1wuf_A 19 HMYFQKARLIHAELPLLAPFKTSYGELKSKDFYIIELINEEGIHGYGELEAFP-------------LPDYTEETLSSAIL 85 (393)
T ss_dssp CEECCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSCEEEEEECCCS-------------STTSSSCCHHHHHH
T ss_pred cCEEEEEEEEEEeeeccCCeEecceeEecCcEEEEEEEECCCCEEEEEeecCC-------------CCcccCCCHHHHHH
Confidence 5899999998772 3333 357999999999999999665421 12366778888888
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
.|++.++|.|+|+|+.+++.+|+.|. .+++ +.+|++|||+||||+.||.+|+|||+||| | .++
T Consensus 86 ~i~~~l~p~l~G~d~~~~~~l~~~l~-~~~g------------~~~a~~aid~AlwDl~gk~~g~Pl~~lLG---g-~~~ 148 (393)
T 1wuf_A 86 IIKEQLLPLLAQRKIRKPEEIQELFS-WIQG------------NEMAKAAVELAVWDAFAKMEKRSLAKMIG---A-TKE 148 (393)
T ss_dssp HHHHTTHHHHHHCEESSTTHHHHHHT-TSCS------------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---C-CCS
T ss_pred HHHHHHHHHHcCCCccCHHHHHHHHH-HccC------------chHHHHHHHHHHHHHHHHHhCCcHHHHhC---C-CCC
Confidence 88888999999999999999999887 4322 25799999999999999999999999999 8 567
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
++|++. +++.+ . +. ++.++++.+...+||+++| .|+| + +.+.+.
T Consensus 149 ~v~~~~--~~g~~----~--~~---------e~~~~~a~~~~~~G~~~~K----iKvg-------------~--~~d~~~ 192 (393)
T 1wuf_A 149 SIKVGV--SIGLQ----Q--NV---------ETLLQLVNQYVDQGYERVK----LKIA-------------P--NKDIQF 192 (393)
T ss_dssp EEEBCE--EECCC----S--CH---------HHHHHHHHHHHHHTCCEEE----EECB-------------T--TBSHHH
T ss_pred cceeeE--EeCCC----C--CH---------HHHHHHHHHHHHHhhHhhe----eccC-------------h--HHHHHH
Confidence 788754 22111 0 11 2234566666666776553 3432 1 123455
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
+++||++ + +++.|++|+ |+.||.+++ +++ +.+++|++.|||||++++|
T Consensus 193 v~avr~a-----~-~~~~l~vDa------------------------N~~~~~~~a-~~~-~~l~~~~i~~iEqP~~~~d 240 (393)
T 1wuf_A 193 VEAVRKS-----F-PKLSLMADA------------------------NSAYNREDF-LLL-KELDQYDLEMIEQPFGTKD 240 (393)
T ss_dssp HHHHHTT-----C-TTSEEEEEC------------------------TTCCCGGGH-HHH-HTTGGGTCSEEECCSCSSC
T ss_pred HHHHHHH-----c-CCCEEEEEC------------------------CCCCCHHHH-HHH-HHHHhCCCeEEECCCCCcC
Confidence 5444443 2 579999999 456788888 775 6689999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
+++|++|+++++ +||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +.|+.+
T Consensus 241 ~~~~~~l~~~~~--ipIa~dE~-~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i 316 (393)
T 1wuf_A 241 FVDHAWLQKQLK--TRICLDEN-IRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCGG-MLEAGV 316 (393)
T ss_dssp SHHHHHHHTTCS--SEEEECTT-CCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEECC-CCCCHH
T ss_pred HHHHHHHHHhCC--CCEEECCC-cCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEecC-CcccHH
Confidence 999999999988 99999998 47799999999999999999999999999999999999999999998887 468988
Q ss_pred HHHHHHHhhhcCCc
Q 013317 389 TFIADLSVGLATGQ 402 (445)
Q Consensus 389 ~~~~~la~a~~~~~ 402 (445)
+..++++++..+.+
T Consensus 317 ~~aa~~hlaa~~~~ 330 (393)
T 1wuf_A 317 GRAHNIALAARNEF 330 (393)
T ss_dssp HHHHHHHHHTSSSC
T ss_pred HHHHHHHHHhCCCC
Confidence 77666666533333
No 54
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=100.00 E-value=2.7e-47 Score=387.30 Aligned_cols=303 Identities=16% Similarity=0.150 Sum_probs=226.8
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||||++|+++.+. .+.+ +..++|+|+||+|++|||++..+ + ....
T Consensus 23 mMkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~g--------------------~---~~~~ 79 (398)
T 4dye_A 23 MMKITDVDVWVVNLPLVNPFTSSFETKTGETRTVVRVRTDSGVEGWGETMWG--------------------A---PVAA 79 (398)
T ss_dssp CCCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECS--------------------H---HHHH
T ss_pred CceEEEEEEEEEeecccccccccccccccceEEEEEEEECCCCEEEEeecCc--------------------h---HHHH
Confidence 8999999998773 3433 35699999999999999865432 1 1233
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
.| +.++|.|+|+||.+++.+|+.|.+... .+ +..+.+|++|||+||||+.||.+|+|||+||| |..++
T Consensus 80 ~i-~~l~p~liG~d~~~~~~~~~~l~~~~~------~~--g~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~ 147 (398)
T 4dye_A 80 IV-RRMAPDLIGTSPFALEAFHRKQHMVPF------FY--GYLGYAAIAAVDVACWDAMGKATGQSVTDLLG---GAVRD 147 (398)
T ss_dssp HH-HHHHHHHTTCCTTCHHHHHHHTTTHHH------HH--HHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCS
T ss_pred HH-HHHHHHHcCCCccCHHHHHHHHHhhhh------hh--ccccHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCcCC
Confidence 45 679999999999999999998862110 01 11235899999999999999999999999999 98777
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE 227 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 227 (445)
++|++ .++.. ...++..... .+++.++++.+...+ ||+++ |.|+|. +.+.+.+
T Consensus 148 ~v~~y--~s~~~-~~~~g~~~~~------~~e~~~~~a~~~~~~~G~~~~----K~KvG~-------------~~~~d~~ 201 (398)
T 4dye_A 148 EVPIT--ALITR-ADAPGATPAD------LPKAMAEHAVRVVEEGGFDAV----KLKGTT-------------DCAGDVA 201 (398)
T ss_dssp EEEBE--EEECG-GGSTTCCTTT------HHHHHHHHHHHHHHHHCCSEE----EEECCS-------------CHHHHHH
T ss_pred eEEEE--EEEec-cccCCcccCC------CHHHHHHHHHHHHHhcCCCEE----EEecCC-------------CHHHHHH
Confidence 88874 33210 0000000000 012334556555566 67655 345441 1223344
Q ss_pred HHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCcc
Q 013317 228 GFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~ 307 (445)
.+++||+++ +++.|+||+ |+.||.++++++. +.++++++.|||||++
T Consensus 202 ~v~avR~~~------~~~~l~vDa------------------------N~~w~~~~A~~~~-~~l~~~~i~~iEqP~~-- 248 (398)
T 4dye_A 202 ILRAVREAL------PGVNLRVDP------------------------NAAWSVPDSVRAG-IALEELDLEYLEDPCV-- 248 (398)
T ss_dssp HHHHHHHHC------TTSEEEEEC------------------------TTCSCHHHHHHHH-HHHGGGCCSEEECCSS--
T ss_pred HHHHHHHhC------CCCeEEeeC------------------------CCCCCHHHHHHHH-HHHhhcCCCEEcCCCC--
Confidence 554444443 579999999 5778999999875 5679999999999999
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|+++++++ ++|+.
T Consensus 249 d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~-~~e~~ 324 (398)
T 4dye_A 249 GIEGMAQVKAKVR--IPLCTNMCV-VRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFGLGMNLHS-GGELG 324 (398)
T ss_dssp HHHHHHHHHHHCC--SCEEESSSC-CSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SCCCH
T ss_pred CHHHHHHHHhhCC--CCEEeCCcC-CCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEEcC-CcchH
Confidence 8999999999998 999999984 6799999999999999999999999999999999999999999998766 78998
Q ss_pred hHHHHHHHhhhcCC
Q 013317 388 DTFIADLSVGLATG 401 (445)
Q Consensus 388 ~~~~~~la~a~~~~ 401 (445)
++.+++++++...+
T Consensus 325 i~~aa~l~laaa~p 338 (398)
T 4dye_A 325 IATAAHLAVVSSTP 338 (398)
T ss_dssp HHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHhcCC
Confidence 88777777665433
No 55
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=100.00 E-value=1.2e-46 Score=382.77 Aligned_cols=309 Identities=17% Similarity=0.170 Sum_probs=223.7
Q ss_pred cceeEEEEEEEecC---CCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHH-------
Q 013317 2 VTINAVKARQIFDS---RGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVN------- 71 (445)
Q Consensus 2 ~~I~~v~~~~i~~~---~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~------- 71 (445)
|||++|+++.+.-. ..+.+++|+|+||+|++|||++... .......++
T Consensus 5 mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~~G~GE~~~~----------------------~~~~~~~~~~~~~~~~ 62 (394)
T 3mqt_A 5 ANIVSVEFIPVNVAATNWSENTVIVKVTDENGVYGLGEADGP----------------------PECMKAFSEIENEHKW 62 (394)
T ss_dssp CCEEEEEEEEEECC-----CEEEEEEEEETTSCEEEEEECSC----------------------HHHHHHHHTCCCCBTT
T ss_pred CeEeEEEEEEEecCCCCCCccEEEEEEEECCCCEEEEEECCc----------------------HHHHHHHHhcccchhh
Confidence 89999999988532 2356799999999999999975431 111111222
Q ss_pred -HhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccee
Q 013317 72 -SIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVL 150 (445)
Q Consensus 72 -~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~i 150 (445)
+.++|.|+|+||.+++++|+.|++... | .|+++...+|+|||||||||+.||.+|+|||+||| |..++++
T Consensus 63 ~~~l~p~liG~dp~~~e~~~~~l~~~~~-----~-~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v 133 (394)
T 3mqt_A 63 LNNIKEAVIGRDPLEFRANYNRMYDTTK-----W-IGMRGLGLFAISGIDMALYDLAGKQLGVPAYKLMG---GAQKAQL 133 (394)
T ss_dssp BCCGGGGTTTSCTTCHHHHHHHHHHHTT-----T-TCSSBHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCCSSSB
T ss_pred HHHHHHHhCCCChhHHHHHHHHHHHhhh-----h-hCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---CCCCCeE
Confidence 249999999999999999999983321 1 12234446899999999999999999999999999 9877777
Q ss_pred eeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHh-hcCCCCcccCCCCCCCCCccCchHHH
Q 013317 151 PVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKK-KYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 151 p~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~-k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
|+ |.++..... ...+.++ ++ ++..+++.+...+||+++ |. |+|.. ..+.+.+.+.+
T Consensus 134 ~~--y~s~~~~~~--~~~~~~~-~i----~~~~~~a~~~~~~G~~~~----K~~k~g~~----------~~~~~~d~~~v 190 (394)
T 3mqt_A 134 TP--YFTLYPSVA--ADATLSE-IV----EAYKPLIAKAKERGAKAV----KVCIIPND----------KVSDKEIVAYL 190 (394)
T ss_dssp CC--EEECCCCCC--TTCCHHH-HH----HHHHHHHHHHHHTTCSEE----EEECCCCT----------TSCHHHHHHHH
T ss_pred EE--EEEecCCCC--CCcchhh-hH----HHHHHHHHHHHHcCCCEE----EecccCCC----------ccCHHHHHHHH
Confidence 76 443221010 0000000 00 012234444444566554 33 44310 01223344555
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCc-ChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKV-SGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~-t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
++||+++ | +++.|++|+ |++| |.++++++. +.++++++.|||||++++|
T Consensus 191 ~avR~a~---G--~d~~l~vDa------------------------n~~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~~ 240 (394)
T 3mqt_A 191 RELREVI---G--WDMDMMVDC------------------------LYRWTDWQKARWTF-RQLEDIDLYFIEACLQHDD 240 (394)
T ss_dssp HHHHHHH---C--SSSEEEEEC------------------------TTCCSCHHHHHHHH-HHTGGGCCSEEESCSCTTC
T ss_pred HHHHHHh---C--CCCeEEEEC------------------------CCCCCCHHHHHHHH-HHHhhcCCeEEECCCCccc
Confidence 5555544 5 589999999 4678 899999975 5689999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|++ ++.+
T Consensus 241 ~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~~-~s~i 315 (394)
T 3mqt_A 241 LIGHQKLAAAIN--TRLCGAEMS-TTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHNAQLM-PHNW-KTGI 315 (394)
T ss_dssp HHHHHHHHHHSS--SEEEECTTC-CHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHTCEEC-CCCC-SCHH
T ss_pred HHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe-ccCC-CchH
Confidence 999999999998 999999985 6799999999999999999999999999999999999999999986 5544 8877
Q ss_pred HH--HHHHHhhhc
Q 013317 389 TF--IADLSVGLA 399 (445)
Q Consensus 389 ~~--~~~la~a~~ 399 (445)
+. .+||+.++.
T Consensus 316 ~~aa~~hlaaa~p 328 (394)
T 3mqt_A 316 TAAAARHFGIVCH 328 (394)
T ss_dssp HHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCC
Confidence 65 455555543
No 56
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=100.00 E-value=6e-47 Score=383.93 Aligned_cols=305 Identities=13% Similarity=0.133 Sum_probs=236.6
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.| +..++|+|+||+|++|||.+.... .+.|.+++..++...
T Consensus 1 MkI~~i~~~~~~lpl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~-------------~p~~~~e~~~~~~~~ 67 (388)
T 3qld_A 1 MSLQTCVLHRLSLPLKFPMRTAHGHIREKQAILVQLVDADGIEGWSECVALA-------------EPTYTEECTDTAWVM 67 (388)
T ss_dssp -CEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEECCCS-------------STTSSSCCHHHHHHH
T ss_pred CEEEEEEEEEEecccCCceEccceEEEeeeEEEEEEEECCCCEEEEecccCC-------------CCccccccHHHHHHH
Confidence 699999998772 3444 356999999999999999543211 123677788888888
Q ss_pred HHHhHhhhcc-------CCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhh
Q 013317 70 VNSIIGPALV-------GKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANL 142 (445)
Q Consensus 70 i~~~l~p~Li-------G~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~ 142 (445)
|++.|.|.|+ |+++.+++++++.|. .+.+ ..+|++||||||||+.||.+|+|||+|||
T Consensus 68 l~~~l~p~l~~~~~~~~G~~~~~~~~~~~~~~-~~~g------------~~~A~said~ALwDl~gk~~g~Pl~~LLG-- 132 (388)
T 3qld_A 68 LVHHLVPRFARWLRAASQDQDVDPRTVCEALR-DVRG------------NRMSVAAIEMAVWDWYAARTGQPLVGLLG-- 132 (388)
T ss_dssp HHHTHHHHHHHHHTSGGGSSCCCGGGGGGGGT-TCCS------------CHHHHHHHHHHHHHHHHHHHTCCHHHHTT--
T ss_pred HHHHHHHHHhhhhcccCCCCccCHHHHHHHHH-HccC------------cHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 9889999999 999999999887765 3321 25799999999999999999999999999
Q ss_pred hCCCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCc
Q 013317 143 AGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI 222 (445)
Q Consensus 143 ~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~ 222 (445)
| .++++|+ |.+++.+ + .+++..+++.+...+||+++| .|+|.
T Consensus 133 -g-~r~~v~~--~~~~~~~-------~--------~~e~~~~~~~~~~~~G~~~~K----~Kv~~--------------- 174 (388)
T 3qld_A 133 -G-GRDRVEV--SATLGMS-------E--------SLDVLIQSVDAAVEQGFRRVK----LKIAP--------------- 174 (388)
T ss_dssp -C-CCSEEEB--EEEECCC-------S--------CHHHHHHHHHHHHHTTCSEEE----EECBT---------------
T ss_pred -C-CCCeEEE--eEEecCC-------C--------CHHHHHHHHHHHHHhCCCeEE----EEeCc---------------
Confidence 8 4667776 4433211 0 012334555555556676553 44331
Q ss_pred cCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEEC
Q 013317 223 QESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIED 302 (445)
Q Consensus 223 ~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEd 302 (445)
+.+.+.+++||+++ +++.|++|+ |+.||.+++++ + +.+++|++.||||
T Consensus 175 ~~d~~~v~avR~~~------~~~~l~vDa------------------------N~~~~~~~A~~-~-~~l~~~~i~~iEe 222 (388)
T 3qld_A 175 GRDRAAIKAVRLRY------PDLAIAADA------------------------NGSYRPEDAPV-L-RQLDAYDLQFIEQ 222 (388)
T ss_dssp TBSHHHHHHHHHHC------TTSEEEEEC------------------------TTCCCGGGHHH-H-HHGGGGCCSCEEC
T ss_pred HHHHHHHHHHHHHC------CCCeEEEEC------------------------CCCCChHHHHH-H-HHHhhCCCcEEEC
Confidence 23466777676654 579999999 46788889885 4 4579999999999
Q ss_pred CCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCC
Q 013317 303 PFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~ 382 (445)
|++++|++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++++|
T Consensus 223 P~~~~d~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~- 298 (388)
T 3qld_A 223 PLPEDDWFDLAKLQASLR--TPVCLDESV-RSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWVGG- 298 (388)
T ss_dssp CSCTTCHHHHHHHHHHCS--SCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-
T ss_pred CCCcccHHHHHHHHHhCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHCCCeEEecC-
Confidence 999999999999999998 999999985 6799999999999999999999999999999999999999999998887
Q ss_pred CCCChhHHHHHHHhhhcCCccccCCC
Q 013317 383 SGETEDTFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 383 ~~et~~~~~~~la~a~~~~~~~~G~~ 408 (445)
+.|+.++.+++++++..+.+..++++
T Consensus 299 ~~es~i~~aa~~~laa~~~~~~~~~~ 324 (388)
T 3qld_A 299 MYETGVGRVHGLIAAALPLMRYATDL 324 (388)
T ss_dssp CCCCHHHHHHHHHHHTSTTBCSCBSC
T ss_pred ccchHHHHHHHHHHHcCCCCCccccc
Confidence 47998887777777753333333343
No 57
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=100.00 E-value=8.7e-47 Score=380.70 Aligned_cols=303 Identities=18% Similarity=0.230 Sum_probs=231.5
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +..++|+|+||+|++|||++... +.|++++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 65 (368)
T 3q45_A 1 MIITQVELYKSPVKLKEPFKISLGILTHANNVIVRIHTASGHIGYGECSPF---------------MTIHGESMDTAFIV 65 (368)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCEEEEEECCC---------------HHHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEEeecCCCEEccCceEeeeeEEEEEEEECCCCEEEeeccCC---------------CCcCCCCHHHHHHH
Confidence 699999998772 2333 35699999999999999965321 11445666666666
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+ +.++|.|+|+||.+++++|+.|++.+.+ ..+|++|||+||||+.||.+|+|||+||| |.. .+
T Consensus 66 ~-~~l~~~l~G~d~~~~~~~~~~l~~~~~~------------~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~-~~ 128 (368)
T 3q45_A 66 G-QYLAKGLIGTSCLDIVSNSLLMDAIIYG------------NSCIKSAFNIALYDLAAQHAGLPLYAFLG---GKK-DK 128 (368)
T ss_dssp H-HHHHHHHTTSBTTCHHHHHHHHHHHCSC------------CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC-CS
T ss_pred H-HHHHHHhcCCChhhHHHHHHHHHHHhcC------------CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Ce
Confidence 6 4799999999999999999999843321 14799999999999999999999999999 874 45
Q ss_pred e-eeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 150 L-PVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 150 i-p~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
+ |+ +..++.+ .+++..+++.+...+||+++ |.|+|. +.+.+.+.
T Consensus 129 v~~~--~~~~~~~----------------~~e~~~~~a~~~~~~G~~~~----K~KvG~-------------~~~~d~~~ 173 (368)
T 3q45_A 129 IIQT--DYTVSID----------------EPHKMAADAVQIKKNGFEII----KVKVGG-------------SKELDVER 173 (368)
T ss_dssp CEEB--CEEECSC----------------CHHHHHHHHHHHHHTTCSEE----EEECCS-------------CHHHHHHH
T ss_pred eeee--EEEecCC----------------CHHHHHHHHHHHHHcCCCeE----EEEecC-------------CHHHHHHH
Confidence 6 54 3222111 11233455655555677655 345541 12334555
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
+++||+++ | +++.|++|+ |++||.+++++++ +.++++++.|||||++++|
T Consensus 174 v~avR~~~---g--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~~~ 223 (368)
T 3q45_A 174 IRMIREAA---G--DSITLRIDA------------------------NQGWSVETAIETL-TLLEPYNIQHCEEPVSRNL 223 (368)
T ss_dssp HHHHHHHH---C--SSSEEEEEC------------------------TTCBCHHHHHHHH-HHHGGGCCSCEECCBCGGG
T ss_pred HHHHHHHh---C--CCCeEEEEC------------------------CCCCChHHHHHHH-HHHhhcCCCEEECCCChhH
Confidence 55555554 5 579999999 5678999999875 5679999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.|+.+
T Consensus 224 ~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i 299 (368)
T 3q45_A 224 YTALPKIRQACR--IPIMADESC-CNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGG-FLESRL 299 (368)
T ss_dssp GGGHHHHHHTCS--SCEEESTTC-CSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC-SSCCHH
T ss_pred HHHHHHHHhhCC--CCEEEcCCc-CCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecC-ccccHH
Confidence 999999999988 999999984 7799999999999999999999999999999999999999999998877 468877
Q ss_pred HHHHHHHhhhcCCcccc
Q 013317 389 TFIADLSVGLATGQIKT 405 (445)
Q Consensus 389 ~~~~~la~a~~~~~~~~ 405 (445)
+..+.++++...++...
T Consensus 300 ~~aa~~hlaaa~p~~~~ 316 (368)
T 3q45_A 300 GFTAAAHVALVSKTICY 316 (368)
T ss_dssp HHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHHcCCCCce
Confidence 65555555543444433
No 58
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=100.00 E-value=1.6e-46 Score=381.45 Aligned_cols=309 Identities=16% Similarity=0.141 Sum_probs=229.0
Q ss_pred cceeEEEEEEEecCCCC----CeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhh
Q 013317 2 VTINAVKARQIFDSRGN----PTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPA 77 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~----~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~ 77 (445)
|||++|+++.+...... ..++|+|+||+|++|||++.... . .+.|.+++. .+.+.++|.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~V~v~td~G~~G~GE~~~~~---~---------~p~~~~e~~-----~i~~~l~p~ 63 (391)
T 3gd6_A 1 MKITDLELHAVGIPRHTGFVNKHVIVKIHTDEGLTGIGEMSDFS---H---------LPLYSVDLH-----DLKQGLLSI 63 (391)
T ss_dssp CCEEEEEEEEEEEEBTTSCEEEEEEEEEEETTSCEEEEEECCCS---S---------SSSCCCCHH-----HHHHHHHHH
T ss_pred CEEEEEEEEEEecccCCCcccceEEEEEEECCCCEEEecccccc---C---------CCccchhHH-----HHHHHHHHH
Confidence 69999999988532222 46999999999999999653210 0 012445544 466789999
Q ss_pred ccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEe
Q 013317 78 LVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNV 157 (445)
Q Consensus 78 LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~ 157 (445)
|+|+||.+++++|+.|.+.+.... +++ ++ +.+|++||||||||+.||.+|+|||+||| |..++++|++ .+
T Consensus 64 liG~d~~~~~~~~~~l~~~~~~~~--~~~-~g--~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~y--~t 133 (391)
T 3gd6_A 64 LLGQNPFDLMKINKELTDNFPETM--YYY-EK--GSFIRNGIDNALHDLCAKYLDISVSDFLG---GRVKEKIKVC--YP 133 (391)
T ss_dssp HTTCCTTCHHHHHHHHHHHSCCCS--CTT-CH--HHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEBC--EE
T ss_pred hCCCCccCHHHHHHHHHHHhhhcc--ccc-Cc--chHHHHHHHHHHHHHHhcccCCcHHHHhC---CCcCCeEEee--EE
Confidence 999999999999999984432111 111 11 35799999999999999999999999999 9877788874 33
Q ss_pred ecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHH
Q 013317 158 INGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIA 237 (445)
Q Consensus 158 ~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~ 237 (445)
++..... . .++..++++.+...+||+++ |.|+|. +.+.+.+.+++||+++
T Consensus 134 ~~~~~~~----~--------~~e~~~~~a~~~~~~G~~~~----KiKvG~-------------~~~~d~~~v~avR~a~- 183 (391)
T 3gd6_A 134 IFRHRFS----E--------EVESNLDVVRQKLEQGFDVF----RLYVGK-------------NLDADEEFLSRVKEEF- 183 (391)
T ss_dssp ECCCSST----T--------HHHHHHHHHHHHHHTTCCEE----EEECSS-------------CHHHHHHHHHHHHHHH-
T ss_pred ecccccC----C--------CHHHHHHHHHHHHHcCCCEE----EEeeCC-------------CHHHHHHHHHHHHHHc-
Confidence 3210000 0 01223445555555566654 345441 1233455565555555
Q ss_pred hcCCCcceEEE-EeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCe--eEEECCCCccCHHHHHH
Q 013317 238 KGGYIGKIVIG-MDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPI--VSIEDPFDQDDWEHYAE 314 (445)
Q Consensus 238 ~~G~~~~i~l~-vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i--~~iEdP~~~~D~~~~~~ 314 (445)
| +++.|+ +|+ |++||.++++++. +.++++++ .|||||++++|++++++
T Consensus 184 --g--~~~~l~~vDa------------------------n~~~~~~~A~~~~-~~l~~~~i~~~~iEqP~~~~d~~~~~~ 234 (391)
T 3gd6_A 184 --G--SRVRIKSYDF------------------------SHLLNWKDAHRAI-KRLTKYDLGLEMIESPAPRNDFDGLYQ 234 (391)
T ss_dssp --G--GGCEEEEEEC------------------------TTCSCHHHHHHHH-HHHTTCCSSCCEEECCSCTTCHHHHHH
T ss_pred --C--CCCcEEEecC------------------------CCCcCHHHHHHHH-HHHHhcCCCcceecCCCChhhHHHHHH
Confidence 5 579999 999 4678999999874 56899999 99999999999999999
Q ss_pred HHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHH
Q 013317 315 LTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADL 394 (445)
Q Consensus 315 L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~l 394 (445)
|+++++ +|| ||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.|+.++.++.+
T Consensus 235 l~~~~~--iPI--dE~-~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~ 308 (391)
T 3gd6_A 235 LRLKTD--YPI--SEH-VWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGT-TQELSVGTAAMA 308 (391)
T ss_dssp HHHHCS--SCE--EEE-CCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CCCCHHHHHHHH
T ss_pred HHHHcC--CCc--CCC-CCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecC-CCccHHHHHHHH
Confidence 999998 998 887 57799999999999999999999999999999999999999999998777 468877655554
Q ss_pred HhhhcCCc
Q 013317 395 SVGLATGQ 402 (445)
Q Consensus 395 a~a~~~~~ 402 (445)
+++...+.
T Consensus 309 hlaaa~~~ 316 (391)
T 3gd6_A 309 HLGCSLTN 316 (391)
T ss_dssp HHHTTCSS
T ss_pred HHHHhCCC
Confidence 44433333
No 59
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=100.00 E-value=2.2e-47 Score=383.58 Aligned_cols=303 Identities=19% Similarity=0.225 Sum_probs=231.4
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +..++|+|+||+|++|||++... +.|++++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 65 (356)
T 3ro6_B 1 MKIADIQVRTEHFPLTRPYRIAFRSIEEIDNLIVEIRTADGLLGLGAASPE---------------RHVTGETLEACHAA 65 (356)
T ss_dssp CBEEEEEEEEEEEEBC----------CEEEEEEEEEEETTSCEEEEEECCC---------------HHHHCCCHHHHHHH
T ss_pred CEEEEEEEEEEEecccCCEEecCeEEEeeeEEEEEEEECCCCEEEecccCC---------------CCcCcCCHHHHHHH
Confidence 699999998773 2333 25699999999999999965431 11456667777777
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
|++.++|.|+|+||.+++++|+.|++.+.+ ..+|++|||+||||+.||.+|+|||+||| |. +++
T Consensus 66 l~~~l~~~l~G~~~~~~~~~~~~l~~~~~~------------~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~-~~~ 129 (356)
T 3ro6_B 66 LDHDRLGWLMGRDIRTLPRLCRELAERLPA------------APAARAALDMALHDLVAQCLGLPLVEILG---RA-HDS 129 (356)
T ss_dssp HCGGGCTTTTTCBGGGHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHHHHHHHTSBHHHHTC---CC-CSC
T ss_pred HHHHhHHHhcCCCccCHHHHHHHHHHhhcc------------chhHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCc
Confidence 888899999999999999999999843321 24799999999999999999999999999 86 556
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|+ |..++.+ .++...+++.+...+||+++ |.|+|. +.+.+.+.+
T Consensus 130 v~~--~~~~~~~----------------~~~~~~~~a~~~~~~G~~~~----K~K~G~-------------~~~~d~~~v 174 (356)
T 3ro6_B 130 LPT--SVTIGIK----------------PVEETLAEAREHLALGFRVL----KVKLCG-------------DEEQDFERL 174 (356)
T ss_dssp EEB--CEEECSC----------------CHHHHHHHHHHHHHTTCCEE----EEECCS-------------CHHHHHHHH
T ss_pred eee--eEEEcCC----------------CHHHHHHHHHHHHHcCCCEE----EEEeCC-------------CHHHHHHHH
Confidence 766 3333211 01233455555555667654 345441 123345555
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCH
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~ 309 (445)
+++|+++ | +++.|++|+ |++||.++++++. +.++++++.|||||++++|+
T Consensus 175 ~avR~~~---g--~~~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~ 224 (356)
T 3ro6_B 175 RRLHETL---A--GRAVVRVDP------------------------NQSYDRDGLLRLD-RLVQELGIEFIEQPFPAGRT 224 (356)
T ss_dssp HHHHHHH---T--TSSEEEEEC------------------------TTCCCHHHHHHHH-HHHHHTTCCCEECCSCTTCH
T ss_pred HHHHHHh---C--CCCEEEEeC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCCCCcH
Confidence 5555554 5 579999999 4678999999875 56799999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcC-CCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 310 EHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEK-TCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 310 ~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~-a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
+++++|+++++ +||++||+. .++++++++++.+ ++|++|||++++||||++++++++|+++|++++++| +.|+.+
T Consensus 225 ~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~-~~es~i 300 (356)
T 3ro6_B 225 DWLRALPKAIR--RRIAADESL-LGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGC-MDESRI 300 (356)
T ss_dssp HHHHTSCHHHH--HTEEESTTC-CSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTCEEEECC-CSCCHH
T ss_pred HHHHHHHhcCC--CCEEeCCcC-CCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCCEEEecC-CcccHH
Confidence 99999999998 999999984 6799999999999 999999999999999999999999999999998877 578877
Q ss_pred HHHHHHHhhhcCCccc
Q 013317 389 TFIADLSVGLATGQIK 404 (445)
Q Consensus 389 ~~~~~la~a~~~~~~~ 404 (445)
+..+.++++...+...
T Consensus 301 ~~aa~~hlaaa~p~~~ 316 (356)
T 3ro6_B 301 SIAAALHAALACPATR 316 (356)
T ss_dssp HHHHHHHHHHTCTTEE
T ss_pred HHHHHHHHHhcCCCCC
Confidence 6544444443333333
No 60
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=100.00 E-value=2.7e-47 Score=386.98 Aligned_cols=301 Identities=18% Similarity=0.196 Sum_probs=225.2
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. ++.+ +..++|+|+||+|++|||++... +.|++++..++...
T Consensus 27 mkI~~i~~~~~~~Pl~~p~~~a~g~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 91 (393)
T 3u9i_A 27 TTIRALTVAPLDIPLHEPFGIASGAQEVARNLLVAVELTDGTRGYGEAAPF---------------PAFNGETQDMAHAA 91 (393)
T ss_dssp TBEEEEEEEEEEEEBCC----------EEEEEEEEEEETTSCEEEEEECCC---------------HHHHSCCHHHHHHH
T ss_pred cEEEEEEEEEEEEecCCceEccCceEEeeeEEEEEEEECCCCEEEEEeeCC---------------CCcCcCCHHHHHHH
Confidence 799999998773 2333 25699999999999999965431 12456667777777
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
++ .++|.|+|+||.+++++|+.|. .... ...+|++|||+||||+.||.+|+|||+||| |.. ++
T Consensus 92 l~-~l~p~l~G~d~~~~~~~~~~l~-~~~~-----------~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~ 154 (393)
T 3u9i_A 92 IL-AARSLVEGADVREWRRIALALP-ALPG-----------MTGSARCAIETAILDALTRRARLPLWAFFG---GAA-TS 154 (393)
T ss_dssp HH-HTHHHHTTSBGGGHHHHHHHGG-GSTT-----------CCHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SE
T ss_pred HH-HHHHHhcCCCcCCHHHHHHHHH-HhcC-----------ccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cc
Confidence 74 6999999999999999999887 3210 124799999999999999999999999999 875 56
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCC---ccCch
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPN---IQESY 226 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~---~~~~~ 226 (445)
+|++ ..++.+ .+++.++++.+...+||+++ |.|+|... ..... .+.+.
T Consensus 155 v~~~--~t~~~~----------------~~e~~~~~a~~~~~~Gf~~i----KlKvg~~~-------~~~~~~~~~~~di 205 (393)
T 3u9i_A 155 LETD--VTITTG----------------SVTAAARAAQAIVARGVTTI----KIKIGAGD-------PDATTIRTMEHDL 205 (393)
T ss_dssp EECC--EEEC-------------------CHHHHHHHHHHHTTTCCEE----EEECC--------------CHHHHHHHH
T ss_pred eEEE--EEecCC----------------CHHHHHHHHHHHHHcCCCeE----EEEeCCCc-------ccccccccHHHHH
Confidence 6653 322211 11234556666666677665 45655210 00000 22234
Q ss_pred HHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhh--hcCCeeEEECCC
Q 013317 227 EGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI--SDHPIVSIEDPF 304 (445)
Q Consensus 227 ~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~--~~~~i~~iEdP~ 304 (445)
+.+++||+++ +++.|+||+ |+.||.+++++++ +.+ ++|++.|||||+
T Consensus 206 ~~v~avR~a~------~d~~L~vDa------------------------N~~w~~~~A~~~~-~~L~~~~~~i~~iEeP~ 254 (393)
T 3u9i_A 206 ARIVAIRDVA------PTARLILDG------------------------NCGYTAPDALRLL-DMLGVHGIVPALFEQPV 254 (393)
T ss_dssp HHHHHHHHHS------TTSEEEEEC------------------------CSCCCHHHHHHHH-HTTTTTTCCCSEEECCS
T ss_pred HHHHHHHHHC------CCCeEEEEc------------------------cCCCCHHHHHHHH-HHHhhCCCCeEEEECCC
Confidence 4444444433 468999999 5778999999875 568 789999999999
Q ss_pred CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCC
Q 013317 305 DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSG 384 (445)
Q Consensus 305 ~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~ 384 (445)
+++|++++++|+++++ +||++||+. .++++++++++.+++|++|||+++ ||||++++++++|+++|+++++++ +.
T Consensus 255 ~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~i~~k~~~-GGit~~~~ia~~A~~~gi~~~~~~-~~ 329 (393)
T 3u9i_A 255 AKDDEEGLRRLTATRR--VPVAADESV-ASATDAARLARNAAVDVLNIKLMK-CGIVEALDIAAIARTAGLHLMIGG-MV 329 (393)
T ss_dssp CTTCTTHHHHHHHTCS--SCEEESTTC-CSHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECC-SS
T ss_pred CCCcHHHHHHHHhhCC--CcEEeCCcC-CCHHHHHHHHHcCCCCEEEecccc-cCHHHHHHHHHHHHHcCCeEEecC-Cc
Confidence 9999999999999988 999999984 679999999999999999999999 999999999999999999998776 46
Q ss_pred CChhHH--HHHHHhhhc
Q 013317 385 ETEDTF--IADLSVGLA 399 (445)
Q Consensus 385 et~~~~--~~~la~a~~ 399 (445)
|+.++. .+||+.+++
T Consensus 330 es~ig~aa~~hlaaa~p 346 (393)
T 3u9i_A 330 ESLLAMTVSACFAAGQG 346 (393)
T ss_dssp CCHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHhcCC
Confidence 887654 455555543
No 61
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=100.00 E-value=1.9e-46 Score=378.14 Aligned_cols=296 Identities=19% Similarity=0.201 Sum_probs=231.6
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +..++|+|+|++|++|||+++.. +.|++++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 65 (367)
T 3dg3_A 1 MKIVAIGAIPFSIPYTKPLRFASGEVHAAEHVLVRVHTDDGIVGVAEAPPR---------------PFTYGETQTGIVAV 65 (367)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEECCC---------------TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCeeccCeEEeeeeEEEEEEEECCCCEEEEeccCC---------------CCccCCCHHHHHHH
Confidence 699999998873 2222 35699999999999999965432 12567777888888
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
|++.++|.|+|+||.+++++|+.|. ...+ ..+|++|||+||||+.||.+|+|||+||| | .+++
T Consensus 66 i~~~l~~~l~G~d~~~~~~~~~~l~-~~~~------------~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g-~~~~ 128 (367)
T 3dg3_A 66 IEQYFAPALIGLTLTEREVAHTRMA-RTVG------------NPTAKAAIDMAMWDALGQSLRLSVSEMLG---G-YTDR 128 (367)
T ss_dssp HHHTHHHHHTTCBTTCHHHHHHHHT-TSCS------------CHHHHHHHHHHHHHHHHHHHTCBHHHHHT---C-CCSE
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHH-hccC------------chHHHHHHHHHHHHHHHHHcCCcHHHHhC---C-CCCe
Confidence 8889999999999999999999887 3211 24799999999999999999999999999 8 6677
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
+|+ +.+++.+ .+++.++++.+...+ ||+++ |.|+|.. +. +.+.+.
T Consensus 129 v~~--~~~~~~~----------------~~~~~~~~a~~~~~~~G~~~~----K~K~g~~-----------~~-~~d~~~ 174 (367)
T 3dg3_A 129 MRV--SHMLGFD----------------DPVKMVAEAERIRETYGINTF----KVKVGRR-----------PV-QLDTAV 174 (367)
T ss_dssp EEE--EEEEESS----------------CHHHHHHHHHHHHHHHCCCEE----EEECCCS-----------ST-HHHHHH
T ss_pred EEE--EEEecCC----------------CHHHHHHHHHHHHHhcCccEE----EEeeCCC-----------hh-hhHHHH
Confidence 776 4333211 012334566666666 67655 4565521 11 124555
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
+++||+++ | +++.|++|+ |++||.++++++. +.++++++.|||||++++|
T Consensus 175 v~avR~a~---g--~~~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d 224 (367)
T 3dg3_A 175 VRALRERF---G--DAIELYVDG------------------------NRGWSAAESLRAM-REMADLDLLFAEELCPADD 224 (367)
T ss_dssp HHHHHHHH---G--GGSEEEEEC------------------------TTCSCHHHHHHHH-HHTTTSCCSCEESCSCTTS
T ss_pred HHHHHHHh---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHHhCCCEEECCCCccc
Confidence 66666555 5 579999999 5678999999875 5689999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++ |||++++++++|+++|++++++| +.|+.+
T Consensus 225 ~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ia~~A~~~gi~~~~~~-~~es~i 299 (367)
T 3dg3_A 225 VLSRRRLVGQLD--MPFIADESV-PTPADVTREVLGGSATAISIKTART-GFTGSTRVHHLAEGLGLDMVMGN-QIDGQI 299 (367)
T ss_dssp HHHHHHHHHHCS--SCEEECTTC-SSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHHHHHHHHHHTCEEEECC-SSCCHH
T ss_pred HHHHHHHHHhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHHHHHHHHHcCCeEEECC-cCCcHH
Confidence 999999999998 999999984 6799999999999999999999999 99999999999999999998877 468877
Q ss_pred HHHH--HHHhhh
Q 013317 389 TFIA--DLSVGL 398 (445)
Q Consensus 389 ~~~~--~la~a~ 398 (445)
+..+ ||+.++
T Consensus 300 ~~aa~~hlaaa~ 311 (367)
T 3dg3_A 300 GTACTVSFGTAF 311 (367)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHhC
Confidence 6544 554443
No 62
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=100.00 E-value=6.7e-47 Score=378.72 Aligned_cols=295 Identities=18% Similarity=0.172 Sum_probs=230.9
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||||++|+++.+. .+.+ +++++|+|+|++|++|||.++.. +.|.+++..+++.
T Consensus 1 MmkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~ 65 (345)
T 2zad_A 1 MSRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASPS---------------FRVNGERVEALLA 65 (345)
T ss_dssp -CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCC---------------HHHHCCCHHHHHH
T ss_pred CCEEEEEEEEEEEeeccCCEEecCeeEeeceEEEEEEEECCCCEEEEEecCC---------------CCcCCCCHHHHHH
Confidence 8999999998772 2333 35799999999999999965431 1245667788887
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
.+++ ++|.|+|+||.+++.+|+.|. .+ ....+|++|||+||||+.||.+|+|||+||| | .++
T Consensus 66 ~i~~-l~~~l~g~d~~~~~~~~~~l~-~~------------~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~ 127 (345)
T 2zad_A 66 IENA-VREMITGIDVRNYARIFEITD-RL------------FGFPSLKAAVQFATLDALSQELGTQVCYLLG---G-KRD 127 (345)
T ss_dssp THHH-HHHHHTTCBGGGHHHHHHHHT-TC------------TTSHHHHHHHHHHHHHHHHHHHTSCHHHHTT---C-CCS
T ss_pred HHHH-HHHHhCCCChhhHHHHHHHHH-Hh------------ccchHHHHHHHHHHHHHHHHHcCCcHHHHhC---C-CCC
Confidence 8887 999999999999999998883 32 1235799999999999999999999999999 8 567
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
++|++. +++++ +. ++..+++.+...+||+.+| .|+|. +..+.
T Consensus 128 ~v~~~~--~~~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~----------------~~~~d 169 (345)
T 2zad_A 128 EIETDK--TVGID-------TV---------ENRVKEAKKIFEEGFRVIK----IKVGE----------------NLKED 169 (345)
T ss_dssp EEEBCE--EECSC-------CH---------HHHHHHHHHHHHTTCSEEE----EECCS----------------CHHHH
T ss_pred ceeeeE--EecCC-------CH---------HHHHHHHHHHHHcCcCEEE----EeecC----------------CHHHH
Confidence 777743 33322 11 1224555555556666553 34431 12444
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCee--EEECCCCc
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIV--SIEDPFDQ 306 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~--~iEdP~~~ 306 (445)
++.+ +++|++| +++.|++|+ |++||.+++++++ +.+++|++. |||||+++
T Consensus 170 ~~~v-~avr~~g--~~~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i~~~~iE~P~~~ 221 (345)
T 2zad_A 170 IEAV-EEIAKVT--RGAKYIVDA------------------------NMGYTQKEAVEFA-RAVYQKGIDIAVYEQPVRR 221 (345)
T ss_dssp HHHH-HHHHHHS--TTCEEEEEC------------------------TTCSCHHHHHHHH-HHHHHTTCCCSEEECCSCT
T ss_pred HHHH-HHHHhhC--CCCeEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCeeeeeCCCCc
Confidence 5555 5555555 689999999 4668899999985 558999999 99999999
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ +||++||+. .++++++++++.+++|++++|++| ||+|++++++++|+++|++++++|+ .||
T Consensus 222 ~~~~~~~~l~~~~~--ipia~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~~-~es 296 (345)
T 2zad_A 222 EDIEGLKFVRFHSP--FPVAADESA-RTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSGLKLMIGCM-GES 296 (345)
T ss_dssp TCHHHHHHHHHHSS--SCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHHHHHHHTTTCEEEECCS-SCC
T ss_pred ccHHHHHHHHHhCC--CCEEEeCCc-CCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHHHHHHHHcCCeEEEecC-ccc
Confidence 99999999999998 999999985 679999999999999999999999 9999999999999999999988885 788
Q ss_pred hhHH--HHHHHhhhc
Q 013317 387 EDTF--IADLSVGLA 399 (445)
Q Consensus 387 ~~~~--~~~la~a~~ 399 (445)
.++. .+||+.+++
T Consensus 297 ~i~~aa~~hlaa~~~ 311 (345)
T 2zad_A 297 SLGINQSVHFALGTG 311 (345)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCC
Confidence 8765 456655544
No 63
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=2.5e-46 Score=378.12 Aligned_cols=305 Identities=18% Similarity=0.243 Sum_probs=236.2
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEec-cCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAV-PSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~-~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
|||++|+++.+. .+.+ +++++|+|+| +|++|||++ |.+ ++.|.+++..++..
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-~G~~G~GE~~~~~--------------~~~~~~e~~~~~~~ 65 (370)
T 1nu5_A 1 MKIEAISTTIVDVPTRRPLQMSFTTVHKQSYVIVQVKA-GGLVGIGEGGSVG--------------GPTWGSESAETIKV 65 (370)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEEECCST--------------TTTTSSCCHHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecceEEEeceeEEEEEEE-CCEEEEEEeccCC--------------CCcccCCCHHHHHH
Confidence 699999998662 2332 3569999999 999999954 432 12366777888888
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
.|++.++|.|+|+||.+++.+|+.|.+.+. ...+|++|||+||||+.||.+|+|||+||| |..++
T Consensus 66 ~i~~~l~~~l~G~d~~~~~~~~~~l~~~~~------------~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~ 130 (370)
T 1nu5_A 66 IIDNYLAPLLVGKDASNLSQARVLMDRAVT------------GNLSAKAAIDIALHDLKARALNLSIADLIG---GTMRT 130 (370)
T ss_dssp HHHHTHHHHHTTSBTTCHHHHHHHHHHHCS------------SCHHHHHHHHHHHHHHHHHHTTCBHHHHHT---CCSCS
T ss_pred HHHHhhHHHHcCCCcccHHHHHHHHHHHhc------------CCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCcCC
Confidence 898889999999999999999999983221 124799999999999999999999999999 98777
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE 227 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 227 (445)
++|++ .+++++ +. +..++++.+... +||+.+| .|+|. .+.+.+.+
T Consensus 131 ~v~~~--~~~~~~-------~~---------e~~~~~a~~~~~~~Gf~~iK----ik~g~------------~~~~~~~e 176 (370)
T 1nu5_A 131 SIPIA--WTLASG-------DT---------ARDIDSALEMIETRRHNRFK----VKLGA------------RTPAQDLE 176 (370)
T ss_dssp EEEBC--EEECSS-------CH---------HHHHHHHHHHHHTTSCSEEE----EECSS------------SCHHHHHH
T ss_pred ceEee--EEecCC-------CH---------HHHHHHHHHHHHhCCccEEE----EecCC------------CChHHHHH
Confidence 78875 333322 11 122345555554 5665543 34431 12233455
Q ss_pred HHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCcc
Q 013317 228 GFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~ 307 (445)
.++++|+++ | +++.|++|+ |++||.+++++++ +.++++++.|||||++++
T Consensus 177 ~v~avr~a~---g--~~~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~ 226 (370)
T 1nu5_A 177 HIRSIVKAV---G--DRASVRVDV------------------------NQGWDEQTASIWI-PRLEEAGVELVEQPVPRA 226 (370)
T ss_dssp HHHHHHHHH---G--GGCEEEEEC------------------------TTCCCHHHHHHHH-HHHHHHTCCEEECCSCTT
T ss_pred HHHHHHHhc---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCcceEeCCCCcc
Confidence 566665555 4 579999999 4568899999985 568999999999999999
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+ ++++++++++++.+++|++++|++++||+|++++++++|+++|++++++| +.||.
T Consensus 227 ~~~~~~~l~~~~~--ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~ 302 (370)
T 1nu5_A 227 NFGALRRLTEQNG--VAILADES-LSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGT-MLDST 302 (370)
T ss_dssp CHHHHHHHHHHCS--SEEEESTT-CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SSCCH
T ss_pred cHHHHHHHHHhCC--CCEEeCCC-CCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecC-CcchH
Confidence 9999999999998 99999998 47899999999999999999999999999999999999999999998777 57998
Q ss_pred hHHHHHHHhhhcCCccc
Q 013317 388 DTFIADLSVGLATGQIK 404 (445)
Q Consensus 388 ~~~~~~la~a~~~~~~~ 404 (445)
++..+.++++...+++.
T Consensus 303 i~~aa~~hlaaa~~~~~ 319 (370)
T 1nu5_A 303 VGTAAALHVYATLPSLP 319 (370)
T ss_dssp HHHHHHHHHHTTSSCCT
T ss_pred HHHHHHHHHHhcCCCCC
Confidence 87665555554344433
No 64
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=100.00 E-value=1.2e-46 Score=383.42 Aligned_cols=323 Identities=13% Similarity=0.097 Sum_probs=221.2
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGK 81 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 81 (445)
||||+|+...+. ..+..++|+|+||+|++|||++.. .+ .+....+.+.++|.|+|+
T Consensus 1 MkIt~ie~~~~~--~~~~~~~V~v~td~G~~G~GE~~~-------------------~~---~~~~~~i~~~l~p~liG~ 56 (400)
T 4dxk_A 1 MKITKLETVRVA--ERTNLLWVLVHTDEGITGLGETFF-------------------GA---ETVETYVHEYIAPRVIGR 56 (400)
T ss_dssp CCEEEEEEEEET--TSTTEEEEEEEETTSCCEEEEEES-------------------CH---HHHHHHHHHTHHHHHTTS
T ss_pred CeEEEEEEEEEC--CCCCEEEEEEEECCCCEEEEcCCC-------------------Cc---cHHHHHHHHHHHHHhCCC
Confidence 699999998873 345689999999999999987321 12 222234556799999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCC
Q 013317 82 DPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGG 161 (445)
Q Consensus 82 d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg 161 (445)
||.+++++|+.|. .+ |+++++++..+|+|||||||||+.||.+|+|||+||| |+.++++|++......+|
T Consensus 57 dp~~~~~~~~~~~-~~------~~~~~~g~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~yas~~~~~~ 126 (400)
T 4dxk_A 57 DPLQIDLLAQDLV-GY------LGFRSSGAEVRGNSAFDIALWDIFGKATNQPIAQLLG---GFSRREIRTYNTCAGTEY 126 (400)
T ss_dssp CTTCHHHHHHHHC-CS------SSCSSCSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSCEEEEBC------
T ss_pred CcchHHHHHHHHH-HH------hccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CCccCceeEEEecccccc
Confidence 9999999999883 32 2223445556899999999999999999999999999 988888887542110011
Q ss_pred c-cCCC--------cccccceeecc-CCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCC--CccCchHHH
Q 013317 162 S-HADN--------KLAMQEFMILP-IGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAP--NIQESYEGF 229 (445)
Q Consensus 162 ~-~~~~--------~~~~~e~~~~p-~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~--~~~~~~~~l 229 (445)
. +... .....+.+. | ......+.+.+...+||+++| .|.|.... .++.+++.. +.+.+.+.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~a~~~~~~G~~~~K----ik~g~~~~-~~~~~g~~~~~~~~~d~~~v 200 (400)
T 4dxk_A 127 IKKATGQQTANYGLSGGKDYDDL-NGFLHRADELAHSLLEDGITAMK----IWPFDAAA-EKTRGQYISMPDLKSALEPF 200 (400)
T ss_dssp -----------------------------CHHHHHHHHHHTTCCEEE----ECTTHHHH-HHHTTSCCCHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhc-ccccccHHHHHHHHHHhCCCEEE----EcCCCccc-cccccCcCCHHHHHHHHHHH
Confidence 0 0000 000000000 0 000011223334445666553 34330000 000011111 122234455
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCH
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~ 309 (445)
++||+++ | +++.|++|+ |++||.++++++. +.++++++.|||||++++|+
T Consensus 201 ~avR~a~---g--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~~~ 250 (400)
T 4dxk_A 201 EKIRKAV---G--DKMDIMVEF------------------------HSMWQLLPAMQIA-KALTPYQTFWHEDPIKMDSL 250 (400)
T ss_dssp HHHHHHH---G--GGSEEEEEC------------------------TTCBCHHHHHHHH-HHTGGGCCSEEECCBCTTSG
T ss_pred HHHHHHc---C--CCceEEEEC------------------------CCCCCHHHHHHHH-HHHhhcCCCEEEcCCCcccH
Confidence 5555544 5 579999999 4678999999874 56899999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhH
Q 013317 310 EHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|+++++++ +. +.++
T Consensus 251 ~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h~-~~-s~i~ 325 (400)
T 4dxk_A 251 SSLTRYAAVSP--APISASETL-GSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVAPHX-CT-GPVV 325 (400)
T ss_dssp GGHHHHHHHCS--SCEEECTTC-CHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC--CC-CHHH
T ss_pred HHHHHHHHhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC-CC-ChHH
Confidence 99999999998 999999985 6799999999999999999999999999999999999999999987544 43 6554
Q ss_pred --HHHHHHhhhc
Q 013317 390 --FIADLSVGLA 399 (445)
Q Consensus 390 --~~~~la~a~~ 399 (445)
+.+||+.++.
T Consensus 326 ~aa~~hlaaa~p 337 (400)
T 4dxk_A 326 LCASTHLSLNAP 337 (400)
T ss_dssp HHHHHHHHHHCT
T ss_pred HHHHHHHHHhCC
Confidence 4556665543
No 65
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=100.00 E-value=1.1e-46 Score=382.44 Aligned_cols=302 Identities=17% Similarity=0.204 Sum_probs=226.1
Q ss_pred CcceeEEEEEEEecC----------CC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHH
Q 013317 1 MVTINAVKARQIFDS----------RG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKA 66 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~----------~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a 66 (445)
||||++|+++.+... .+ +..++|+|+||+|++|||++.. . + +. .++.
T Consensus 2 ~MkI~~i~~~~~~~pl~~~~p~~~a~~~~~~~~~~~V~v~td~G~~G~GE~~~-~----~-----------~~---~~~~ 62 (389)
T 3ozy_A 2 SLKITEVKAHALSTPIPERMRVESGAGLKLNRQMILVEVRTDEGVTGVGSPSG-P----Y-----------DL---AVLK 62 (389)
T ss_dssp CCCEEEEEEEEEEEECCGGGCCEETTEEBCEEEEEEEEEEETTSCCEEECCCS-S----S-----------CH---HHHH
T ss_pred CCEEEEEEEEEEeccCcCCCcccccccccccceEEEEEEEECCCCEEEEecCC-C----C-----------Cc---hHHH
Confidence 589999999887421 11 3569999999999999996542 1 1 11 2233
Q ss_pred HHHHHHhHhhhccCCCCCCHHHHHHHHHHh--hccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhC
Q 013317 67 VQNVNSIIGPALVGKDPTEQTQIDNFMVQQ--LDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAG 144 (445)
Q Consensus 67 ~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~--l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G 144 (445)
...++ .++|.|+|+||.+++++|+.|++. +.+ .|+++...+|++|||+||||+.||.+|+|||+||| |
T Consensus 63 ~~~i~-~l~p~l~G~d~~~~~~~~~~l~~~~~~~~------~g~~~~~~~A~said~AlwDl~gK~~g~Pl~~LLG---g 132 (389)
T 3ozy_A 63 RAIED-VIGPQLIGEDPANINYLWHKVFHGEVSRN------LGHRSVGIAAMSGVDIALWDLKGRAMNQPIYQLLG---G 132 (389)
T ss_dssp HHHHH-TTHHHHTTSCTTCHHHHHHHHHHHTHHHH------HCSBSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---S
T ss_pred HHHHH-HHHHHHcCCCcchHHHHHHHHHhhhhhhc------cCCchHHHHHHHHHHHHHHHHhHhHcCCCHHHHhC---C
Confidence 33454 599999999999999999999832 221 12334456899999999999999999999999999 9
Q ss_pred CCcce-eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCcc
Q 013317 145 NKTLV-LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQ 223 (445)
Q Consensus 145 ~~~~~-ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~ 223 (445)
..+++ +|+ |.++.|... + ++...+++.+...+||+++ |.|+|. +.+
T Consensus 133 ~~r~~~v~~--y~~~~~~~~-----~---------~e~~~~~a~~~~~~G~~~i----KiKvG~-------------~~~ 179 (389)
T 3ozy_A 133 KFHTRGVRA--YASSIYWDL-----T---------PDQAADELAGWVEQGFTAA----KLKVGR-------------APR 179 (389)
T ss_dssp CSSTTCEEE--EEEEECSSC-----C---------HHHHHHHHHHHHHTTCSEE----EEECCS-------------CHH
T ss_pred cccCCceee--EEecCCCCC-----C---------HHHHHHHHHHHHHCCCCEE----eeccCC-------------CHH
Confidence 87777 776 444311000 0 1223344544445566654 345441 223
Q ss_pred CchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECC
Q 013317 224 ESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDP 303 (445)
Q Consensus 224 ~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP 303 (445)
.+.+.+++||+++ | +++.|++|+ |++||.++++++. +.++++++.|||||
T Consensus 180 ~d~~~v~avR~a~---g--~d~~l~vDa------------------------n~~~~~~~A~~~~-~~l~~~~i~~iEqP 229 (389)
T 3ozy_A 180 KDAANLRAMRQRV---G--ADVEILVDA------------------------NQSLGRHDALAML-RILDEAGCYWFEEP 229 (389)
T ss_dssp HHHHHHHHHHHHH---C--TTSEEEEEC------------------------TTCCCHHHHHHHH-HHHHHTTCSEEESC
T ss_pred HHHHHHHHHHHHc---C--CCceEEEEC------------------------CCCcCHHHHHHHH-HHHHhcCCCEEECC
Confidence 3455555555554 5 579999999 4678999999875 56899999999999
Q ss_pred CCccCHHHHHHHH-HHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCC
Q 013317 304 FDQDDWEHYAELT-GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 304 ~~~~D~~~~~~L~-~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~ 382 (445)
++++|++++++|+ ++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++ |+
T Consensus 230 ~~~~d~~~~~~l~~~~~~--iPIa~dE~i-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~-h~ 305 (389)
T 3ozy_A 230 LSIDDIEGHRILRAQGTP--VRIATGENL-YTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNP-HT 305 (389)
T ss_dssp SCTTCHHHHHHHHTTCCS--SEEEECTTC-CHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECC-CC
T ss_pred CCcccHHHHHHHHhcCCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe-cC
Confidence 9999999999999 8888 999999985 66999999999999999999999999999999999999999999865 43
Q ss_pred CCCChhH--HHHHHHhhhc
Q 013317 383 SGETEDT--FIADLSVGLA 399 (445)
Q Consensus 383 ~~et~~~--~~~~la~a~~ 399 (445)
.++.++ +.+||+.++.
T Consensus 306 -~~~~i~~aa~~hlaaa~~ 323 (389)
T 3ozy_A 306 -FNDIITVAANLHLVAASP 323 (389)
T ss_dssp -TTSHHHHHHHHHHHHHCC
T ss_pred -CCcHHHHHHHHHHHHhCC
Confidence 467665 4556665544
No 66
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=100.00 E-value=3.9e-46 Score=378.16 Aligned_cols=299 Identities=14% Similarity=0.129 Sum_probs=226.0
Q ss_pred CcceeEEEEEEEec---------CCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHH
Q 013317 1 MVTINAVKARQIFD---------SRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAV 67 (445)
Q Consensus 1 ~~~I~~v~~~~i~~---------~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~ 67 (445)
+|||++|+++.+.- |.| +..++|+|+||+|++|||++.... +.|..++...+.
T Consensus 22 ~MkI~~i~~~~~~~pl~~~p~~~s~g~~~~~~~~~V~i~td~G~~G~GE~~~~~--------------~~~~~~~~~~~~ 87 (391)
T 4e8g_A 22 SMKIAEIHVYAHDLPVKDGPYTIASSTVWSLQTTLVKIVADSGLAGWGETCPVG--------------PTYAPSHALGAR 87 (391)
T ss_dssp -CCEEEEEEEEEEC---------------CCEEEEEEEEETTSCEEEEEECCSS--------------TTTSSCCHHHHH
T ss_pred CCEEEEEEEEEEeeeCCCCCcccccceeeeeeEEEEEEEECCCCEEEecCcCCC--------------CccCCccHHHHH
Confidence 48999999988742 222 356999999999999999543210 124444566666
Q ss_pred HHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 68 QNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
..|++ +.|.|+|+||.+++.+|+.|.+.+.+ ..+|++|||+||||+.||.+|+|||+||| |..+
T Consensus 88 ~~l~~-l~p~l~G~d~~~~~~~~~~l~~~~~g------------~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r 151 (391)
T 4e8g_A 88 AALAE-MAPGLIGANPLQPLVLRRRMDGLLCG------------HNYAKAAIDIAAYDLMGKHYGVRVADLLG---GVAA 151 (391)
T ss_dssp HHHHH-HGGGGTTCCTTCHHHHHHHHHTTCSS------------CHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCSC
T ss_pred HHHHH-HHHHHCCCCcCCHHHHHHHHHHHhcC------------cHHHHHHHHHHHHHHHHHHcCChHHHhcC---CCCC
Confidence 66765 99999999999999999999832211 14799999999999999999999999999 9877
Q ss_pred ceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE 227 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 227 (445)
+++|++ .+++.+ .+++..+++.+...+||+.+ |.|+|. .+.+.+.+
T Consensus 152 ~~v~~y--~s~~~~----------------~~e~~~~~a~~~~~~G~~~~----KlKvg~------------~~~~~d~~ 197 (391)
T 4e8g_A 152 ERVPSY--YATGIG----------------QPDEIARIAAEKVAEGFPRL----QIKIGG------------RPVEIDIE 197 (391)
T ss_dssp SEEECC--EEECSC----------------CHHHHHHHHHHHHHTTCSEE----EEECCS------------SCHHHHHH
T ss_pred CcEEEe--EEcCCC----------------CHHHHHHHHHHHHHcCCcEE----EEcCCC------------CCHHHHHH
Confidence 778774 333211 11233455555555667655 345542 11233345
Q ss_pred HHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCcc
Q 013317 228 GFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~ 307 (445)
.++++|+++ |- +++.|++|+ |+.||.+++++++ +.+++|++ |||||+ +
T Consensus 198 ~v~avR~a~---gg-~~~~L~vDa------------------------N~~w~~~~A~~~~-~~L~~~~i-~iEeP~--~ 245 (391)
T 4e8g_A 198 TVRKVWERI---RG-TGTRLAVDG------------------------NRSLPSRDALRLS-RECPEIPF-VLEQPC--N 245 (391)
T ss_dssp HHHHHHHHH---TT-TTCEEEEEC------------------------TTCCCHHHHHHHH-HHCTTSCE-EEESCS--S
T ss_pred HHHHHHHHh---CC-CCCeEEEeC------------------------CCCCCHHHHHHHH-HHHhhcCe-EEecCC--c
Confidence 555554444 30 369999999 5778999999875 55799999 999996 5
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++|+ .|+.
T Consensus 246 ~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es~ 321 (391)
T 4e8g_A 246 TLEEIAAIRGRVQ--HGIYLDESG-EDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARALPHSCDDA-WGGD 321 (391)
T ss_dssp SHHHHHHHGGGCC--SCEEESTTC-CSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCCEEEECS-SCSH
T ss_pred cHHHHHHHHhhCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEeCCc-CCCH
Confidence 8999999999998 999999985 67999999999999999999999999999999999999999999998884 6887
Q ss_pred hHHH--HHHHhhhc
Q 013317 388 DTFI--ADLSVGLA 399 (445)
Q Consensus 388 ~~~~--~~la~a~~ 399 (445)
++.. +||+.++.
T Consensus 322 i~~aa~~hlaaa~p 335 (391)
T 4e8g_A 322 IIAAACTHIGATVQ 335 (391)
T ss_dssp HHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhCC
Confidence 7654 55555543
No 67
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=100.00 E-value=9.7e-47 Score=384.65 Aligned_cols=302 Identities=20% Similarity=0.256 Sum_probs=228.3
Q ss_pred cceeEEEEEEEe------------------------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeecc
Q 013317 2 VTINAVKARQIF------------------------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRD 53 (445)
Q Consensus 2 ~~I~~v~~~~i~------------------------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d 53 (445)
|||++|+++.+- ++++ +.+++|+|+||+|++|||.+...
T Consensus 23 m~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~lV~v~td~G~~G~GE~~~~------------- 89 (412)
T 3stp_A 23 MKIKSVRTRVWTWKGPTVPPQGNFCTNASDALWMKGDAMSSFRFHQWLTCEVETEDGTIGIGNAALA------------- 89 (412)
T ss_dssp CCEEEEEEEEEEECSCCCCCCSSSCCCGGGGSCCCSCTTTTTCCCEEEEEEEEETTSCEEEEEECSS-------------
T ss_pred cEEEEEEEEEEeccCCCCCCCCCCCCCchhccCCCCCcceEEEeccEEEEEEEECCCCEEEEeccCC-------------
Confidence 799999998773 2222 24599999999999999954321
Q ss_pred CCcccCCccHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCC
Q 013317 54 GGWDYHGRGVLKAVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKI 133 (445)
Q Consensus 54 ~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~ 133 (445)
...+...|++.|+|.|+|+||.+++++|+.|++... .+|++++..+|++||||||||+.||.+|+
T Consensus 90 ---------~~~~~~~i~~~l~p~LiG~dp~~~e~l~~~~~~~~~------~~g~~g~~~~A~saiD~ALwDl~gK~~g~ 154 (412)
T 3stp_A 90 ---------PSVVKKVIDDWYAPLVIGEDPFDYAYIWEKMYRRSH------AWGRKGIGMTAISAIDIAIWDLMGKLVGK 154 (412)
T ss_dssp ---------HHHHHHHHHHTTHHHHTTSCGGGHHHHHHHHHHHTH------HHHSSTHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ---------HHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHhh------hcCCcchHHHHHHHHHHHHHHHHhhhcCC
Confidence 124455677789999999999999999999984322 12234445689999999999999999999
Q ss_pred chHHHHHhhhCCCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccC
Q 013317 134 PLYQHIANLAGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVG 213 (445)
Q Consensus 134 Pl~~lLG~~~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~ 213 (445)
|||+||| |..++++|+ |++. .+ . ..++...+++.+...+||+.+ |.|+|....
T Consensus 155 Pv~~LLG---G~~r~~v~~--y~s~-~~--~------------~~~e~~~~~a~~~~~~Gf~~i----Kik~g~gp~--- 207 (412)
T 3stp_A 155 PVFKLLG---GRTKDRIPV--YYSK-LY--A------------GSIEAMQKEAEEAMKGGYKAF----KSRFGYGPK--- 207 (412)
T ss_dssp BHHHHHT---CCSSSSEEE--EEEC-CC--S------------CCHHHHHHHHHHHHTTTCSEE----EEECCCCGG---
T ss_pred CHHHhcC---CCCCceEEE--EEEe-cC--C------------CCHHHHHHHHHHHHHcCCCEE----EEecccCcc---
Confidence 9999999 987778776 4431 01 0 011223445555555567655 345542100
Q ss_pred CCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhh
Q 013317 214 DEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFIS 293 (445)
Q Consensus 214 ~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~ 293 (445)
+|+ .+++.+.+.+++||+++ | +++.|++|+ |++||.++++++. +.++
T Consensus 208 -dg~--~~~~~die~v~avReav---G--~d~~L~vDa------------------------N~~~~~~~Ai~~~-~~Le 254 (412)
T 3stp_A 208 -DGM--PGMRENLKRVEAVREVI---G--YDNDLMLEC------------------------YMGWNLDYAKRML-PKLA 254 (412)
T ss_dssp -GHH--HHHHHHHHHHHHHHHHH---C--SSSEEEEEC------------------------TTCSCHHHHHHHH-HHHG
T ss_pred -ccc--chHHHHHHHHHHHHHHc---C--CCCeEEEEC------------------------CCCCCHHHHHHHH-HHHH
Confidence 011 11122344555555544 5 589999999 4678999999875 5689
Q ss_pred cCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHc
Q 013317 294 DHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRA 373 (445)
Q Consensus 294 ~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~ 373 (445)
++++.|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++
T Consensus 255 ~~~i~~iEeP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~li~~~a~D~v~ik~~~~GGit~a~kia~~A~a~ 331 (412)
T 3stp_A 255 PYEPRWLEEPVIADDVAGYAELNAMNI--VPISGGEHE-FSVIGCAELINRKAVSVLQYDTNRVGGITAAQKINAIAEAA 331 (412)
T ss_dssp GGCCSEEECCSCTTCHHHHHHHHHTCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHH
T ss_pred hcCCCEEECCCCcccHHHHHHHHhCCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEecChhhcCCHHHHHHHHHHHHHc
Confidence 999999999999999999999999988 999999985 67999999999999999999999999999999999999999
Q ss_pred CCcEEecCCCCCChhHHHHHHHhhhc
Q 013317 374 GWGVMASHRSGETEDTFIADLSVGLA 399 (445)
Q Consensus 374 g~~~~~~~~~~et~~~~~~~la~a~~ 399 (445)
|+++++++ +.++.+||++|+.
T Consensus 332 gi~v~~h~-----~~aa~~hlaaA~~ 352 (412)
T 3stp_A 332 QIPVIPHA-----GQMHNYHLTMANT 352 (412)
T ss_dssp TCCBCCSS-----CSHHHHHHHHTCT
T ss_pred CCEEEecc-----HHHHHHHHHHhCC
Confidence 99986554 4677889987754
No 68
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=100.00 E-value=3.2e-46 Score=383.44 Aligned_cols=315 Identities=14% Similarity=0.144 Sum_probs=223.6
Q ss_pred CcceeEEEEEEEec-------CCC--C---CeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIFD-------SRG--N---PTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~~-------~~g--~---~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||||++|+++.+.- +.| . ..++|+|+||+|++|+|+++. + .....
T Consensus 22 ~mkI~~i~~~~v~~P~~~~~~~~g~~~~~~~~~~V~v~td~G~~G~GE~~g--------------------~---~~v~~ 78 (441)
T 3vc5_A 22 SMLIREVRVTPVAFRDPPLLNAAGVHQPWALRTIVEVVTDEGITGLGETYG--------------------D---LAHLE 78 (441)
T ss_dssp -CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTCCEEEEEEEC--------------------C---HHHHH
T ss_pred CcEEEEEEEEEEecCCcccccccCccccceeEEEEEEEECCCCEEEEeCCC--------------------h---HHHHH
Confidence 58999999998842 222 1 248999999999999987642 1 12233
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCcccccccc------ccchhHHHHHHHHHHHHHHhcCCchHHHHHhh
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQK------LGANAILAVSLAVCKAGAMVKKIPLYQHIANL 142 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~------~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~ 142 (445)
.| +.++|.|+|+||.+++++|+.|++.+.+....-.+|+.+ +...|++|||+||||+.||.+|+|||+|||
T Consensus 79 ~i-~~l~p~LiG~d~~~~e~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG-- 155 (441)
T 3vc5_A 79 QV-RAAAARLPGLDVYALHRIYRRVADVVGANIVTDMHGLTGSSSRVKTVDRVFAAFEVACLDIQGKAAGRPVADLLG-- 155 (441)
T ss_dssp HH-HHHHHTCTTSBTTCHHHHHHHHHHHHTTCCCCCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT--
T ss_pred HH-HHHHHHhCCCChhHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 45 469999999999999999999985432210000011222 334799999999999999999999999999
Q ss_pred hCCCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCC
Q 013317 143 AGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPN 221 (445)
Q Consensus 143 ~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~ 221 (445)
|..++++|++.|....-..+ ++. .......+..+++.++++.+...+ ||+++ |.|+|. .+
T Consensus 156 -G~~rd~v~~~a~~~~~~~~~-~g~-~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~----KlKvG~------------~~ 216 (441)
T 3vc5_A 156 -GKVRDAVPYSAYLFYKWAGH-PGK-PEDRFGPALDPDGIVAQARLLIGEYGFRSI----KLKGGV------------FP 216 (441)
T ss_dssp -CCSSSEEEBCEEEECBCSBC-TTS-CBCTTCCBCSHHHHHHHHHHHHHHHCCSSE----EEECSS------------SC
T ss_pred -CCCCCeEEEEEeeccccccC-CCc-cccccccCCCHHHHHHHHHHHHHhcCCCEE----EEccCC------------CC
Confidence 98888899865532110000 000 000000001123345555555543 67655 345442 11
Q ss_pred ccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEE
Q 013317 222 IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIE 301 (445)
Q Consensus 222 ~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iE 301 (445)
.+.+.+++++||+++ +++.|+||+ |+.||.++++++. +.++++ +.|||
T Consensus 217 ~~~Di~rv~avRea~------pd~~L~vDa------------------------N~~w~~~~Ai~~~-~~L~~~-l~~iE 264 (441)
T 3vc5_A 217 PEQEAEAIQALRDAF------PGLPLRLDP------------------------NAAWTVETSIRVG-RALDGV-LEYLE 264 (441)
T ss_dssp HHHHHHHHHHHHHHS------TTCCEEEEC------------------------TTCSCHHHHHHHH-HHTTTT-CSEEE
T ss_pred HHHHHHHHHHHHHhC------CCCcEeccC------------------------CCCCCHHHHHHHH-HHHHHH-HHHhh
Confidence 122344454454443 579999999 5789999999985 457899 99999
Q ss_pred CCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecC
Q 013317 302 DPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASH 381 (445)
Q Consensus 302 dP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~ 381 (445)
||++ |++++++|+++++ +||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|+++++ |
T Consensus 265 eP~~--~~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~l~~~a~dii~~d~~~~GGitea~kia~lA~~~gv~v~~-h 338 (441)
T 3vc5_A 265 DPTP--GIDGMARVAAEVP--MPLATNMC-VVTPEHLPAAVERRPIGVLLIDHHYWGGLVRSAHIATLCATFGIELSM-H 338 (441)
T ss_dssp CCSS--SHHHHHHHHTTSS--SCEEESSS-CCSGGGHHHHHHHCCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEE-C
T ss_pred ccCC--CHHHHHHHHhcCC--CCEEeCCC-CCCHHHHHHHHHhCCCCEEeechhhcCCHHHHHHHHHHHHHcCCEEEe-c
Confidence 9995 8999999999998 99999998 477999999999999999999999999999999999999999999864 5
Q ss_pred CCCCChhHHH--HHHHhhh
Q 013317 382 RSGETEDTFI--ADLSVGL 398 (445)
Q Consensus 382 ~~~et~~~~~--~~la~a~ 398 (445)
.+.|+.++.+ +||++++
T Consensus 339 ~~~e~~i~~aa~~hlaaa~ 357 (441)
T 3vc5_A 339 SNSHLGISLAAMTHLAAAT 357 (441)
T ss_dssp CCSCCHHHHHHHHHHHHTC
T ss_pred CCcccHHHHHHHHHHHHhC
Confidence 4678877654 4665543
No 69
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=100.00 E-value=1.6e-46 Score=379.45 Aligned_cols=304 Identities=21% Similarity=0.270 Sum_probs=237.3
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +++++|+|+|++|++|||.++.. +.|.+++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~G~GE~~~~---------------~~~~~~~~~~~~~~ 65 (369)
T 2p8b_A 1 MKITAIHLYAIRLPLRNPFVISYGSYSDMPSIIVKMETDEGIIGYGEGVAD---------------DHVTGESWESTFHT 65 (369)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCC---------------HHHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEecceeEEeeeEEEEEEEECCCCEEEEEecCC---------------CCcCCCCHHHHHHH
Confidence 699999988662 2333 35799999999999999966431 12456677888888
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
|++.++|.|+|+||.+++++|+.|. .... ...+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 66 i~~~l~~~l~g~d~~~~~~~~~~l~-~~~~-----------~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~ 130 (369)
T 2p8b_A 66 LKHTLTPALIGQNPMNIEKIHDMMD-NTIY-----------GVPTAKAAIDIACFDIMGKKLNQPVYQLIG---GRYHEE 130 (369)
T ss_dssp HHHTHHHHHTTCCTTCHHHHHHHHH-HHCS-----------CCHHHHHHHHHHHHHHHHHHTTSBGGGGTT---CCCCSC
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHH-HHhc-----------CChHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCc
Confidence 8888999999999999999999998 3321 124799999999999999999999999999 976677
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|++ .+++++ +. ++..+++.+...+||+.+| .|.|. +.+.+.+.+
T Consensus 131 v~~~--~~i~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~-------------~~~~~~e~v 175 (369)
T 2p8b_A 131 FPVT--HVLSIA-------DP---------ENMAEEAASMIQKGYQSFK----MKVGT-------------NVKEDVKRI 175 (369)
T ss_dssp EECC--EEECSC-------CH---------HHHHHHHHHHHHTTCCEEE----EECCS-------------CHHHHHHHH
T ss_pred eeee--EEecCC-------Ch---------HHHHHHHHHHHHcCcCEEE----EEeCC-------------CHHHHHHHH
Confidence 7764 333322 11 1224455555555665543 34331 123335555
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHH-HHHHHhhhcCCeeEEECCCCccC
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLK-NVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i-~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
+.+|+++ | +++.|++|+ |++||.++++ +++ +.++++++.|||||++++|
T Consensus 176 ~avr~a~---g--~~~~l~vDa------------------------n~~~~~~~a~~~~~-~~l~~~~i~~iEqP~~~~d 225 (369)
T 2p8b_A 176 EAVRERV---G--NDIAIRVDV------------------------NQGWKNSANTLTAL-RSLGHLNIDWIEQPVIADD 225 (369)
T ss_dssp HHHHHHH---C--TTSEEEEEC------------------------TTTTBSHHHHHHHH-HTSTTSCCSCEECCBCTTC
T ss_pred HHHHHHh---C--CCCeEEEEC------------------------CCCCCHHHHHHHHH-HHHHhCCCcEEECCCCccc
Confidence 5555554 5 579999999 4567888998 885 5689999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+ ++++++++++++.+++|++++|++++||+|++++++++|+++|++++++| +.|+.+
T Consensus 226 ~~~~~~l~~~~~--iPI~~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i 301 (369)
T 2p8b_A 226 IDAMAHIRSKTD--LPLMIDEG-LKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGS-MVESSV 301 (369)
T ss_dssp HHHHHHHHHTCC--SCEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-SSCCHH
T ss_pred HHHHHHHHHhCC--CCEEeCCC-CCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecC-CCccHH
Confidence 999999999988 99999998 47799999999999999999999999999999999999999999998888 479988
Q ss_pred HHHHHHHhhhcCCccc
Q 013317 389 TFIADLSVGLATGQIK 404 (445)
Q Consensus 389 ~~~~~la~a~~~~~~~ 404 (445)
+.+++++++...+...
T Consensus 302 ~~~a~~~laa~~~~~~ 317 (369)
T 2p8b_A 302 ASSAGFHVAFSKKIIT 317 (369)
T ss_dssp HHHHHHHHHTTCTTEE
T ss_pred HHHHHHHHHHcCCCCc
Confidence 8777777765544443
No 70
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=100.00 E-value=3.6e-46 Score=377.37 Aligned_cols=295 Identities=14% Similarity=0.170 Sum_probs=225.5
Q ss_pred CcceeEEEEEEEe--------cCCC------CCeEEEEEEeCCCcEEEEec-cCCCccccccceeeccCCcccCCccHHH
Q 013317 1 MVTINAVKARQIF--------DSRG------NPTVEVDVSLSDGTLARAAV-PSGASTGIYEALELRDGGWDYHGRGVLK 65 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g------~~~v~V~V~td~G~~G~g~~-~~~~~~g~~e~~~~~d~~~~y~~~~~~~ 65 (445)
||||++|+++.+. .+.| +..++|+|+||+|++|||++ |.+. .|.+++..+
T Consensus 2 ~MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~---------------~~~~~~~~~ 66 (378)
T 3eez_A 2 SLKITRITVYQVDLPLEHPYWLSGGRLKFELLDATLVKLETDAGITGWGEGTPWGH---------------TYVPAHGPG 66 (378)
T ss_dssp -CCEEEEEEEEEEEEBSSCCC------CCCEEEEEEEEEEETTCCCEEEEECCSCS---------------SSSSCCHHH
T ss_pred CcEEEEEEEEEEeccCCCceeecCCcceeeeeeEEEEEEEECCCCEEEecccCCCC---------------ccCCCcHHH
Confidence 5899999998873 2323 24699999999999999954 3321 255556666
Q ss_pred HHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q 013317 66 AVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGN 145 (445)
Q Consensus 66 a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~ 145 (445)
+...|+ .++|.|+|+||.+++++|+.|.+.+.+ ..+|++|||+||||+.||.+|+|||+||| |.
T Consensus 67 ~~~~l~-~l~p~l~G~d~~~~~~~~~~l~~~~~g------------~~~A~said~ALwDl~gk~~g~Pl~~LlG---g~ 130 (378)
T 3eez_A 67 IRAGIE-TMAPFVLGLDPRRLLDVERAMDIALPG------------HLYAKSPIDMACWDIAGQAAGLPIADLMG---GG 130 (378)
T ss_dssp HHHHHH-HHHHHHTTSCTTCHHHHHHHHHHHSSS------------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC
T ss_pred HHHHHH-HHHHHhcCCCcCCHHHHHHHHHHHhcC------------cHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC
Confidence 666674 599999999999999999999843321 14799999999999999999999999999 98
Q ss_pred CcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCc
Q 013317 146 KTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQES 225 (445)
Q Consensus 146 ~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~ 225 (445)
.++++|+ |.++.++ + ++...+++.+...+||+.+ |.|+|. + .
T Consensus 131 ~r~~v~~--~~~~~~~-------~---------~e~~~~~a~~~~~~G~~~i----KiK~G~-------------~---~ 172 (378)
T 3eez_A 131 SRTPRPI--ASSVGAK-------S---------VEETRAVIDRYRQRGYVAH----SVKIGG-------------D---V 172 (378)
T ss_dssp CCSCEEB--BCCBCSC-------C---------HHHHHHHHHHHHHTTCCEE----EEECCS-------------C---H
T ss_pred CCCeEEE--EEEecCC-------C---------HHHHHHHHHHHHhCCCCEE----EeccCC-------------C---H
Confidence 7777877 3332111 0 1223344444444566544 345441 1 2
Q ss_pred hHHHHHHHHHHHh-cCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCC
Q 013317 226 YEGFELLKTAIAK-GGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPF 304 (445)
Q Consensus 226 ~~~l~~v~~ai~~-~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~ 304 (445)
.+.++.+ +++|+ +| +++.|++|+ |++||.++++++. +.++++++ |||||+
T Consensus 173 ~~d~~~v-~avR~a~g--~~~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i-~iEqP~ 223 (378)
T 3eez_A 173 ERDIARI-RDVEDIRE--PGEIVLYDV------------------------NRGWTRQQALRVM-RATEDLHV-MFEQPG 223 (378)
T ss_dssp HHHHHHH-HHHTTSCC--TTCEEEEEC------------------------TTCCCHHHHHHHH-HHTGGGTC-CEECCS
T ss_pred HHHHHHH-HHHHHHcC--CCceEEEEC------------------------CCCCCHHHHHHHH-HHhccCCe-EEecCC
Confidence 4455555 44554 55 579999999 4678999999875 56789999 999999
Q ss_pred CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCC
Q 013317 305 DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSG 384 (445)
Q Consensus 305 ~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~ 384 (445)
+ |++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||+|++++++++|+++|++++++|+ .
T Consensus 224 ~--~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~~-~ 297 (378)
T 3eez_A 224 E--TLDDIAAIRPLHS--APVSVDECL-VTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMAT-G 297 (378)
T ss_dssp S--SHHHHHHTGGGCC--CCEEECTTC-CSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECS-S
T ss_pred C--CHHHHHHHHhhCC--CCEEECCCC-CCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCCC-C
Confidence 8 8999999999998 999999984 67999999999999999999999999999999999999999999998985 6
Q ss_pred CChhHHH--HHHHhhhc
Q 013317 385 ETEDTFI--ADLSVGLA 399 (445)
Q Consensus 385 et~~~~~--~~la~a~~ 399 (445)
|+.++.. +||+.++.
T Consensus 298 es~i~~aa~~hlaaa~~ 314 (378)
T 3eez_A 298 GSVLADAEALHLAATIP 314 (378)
T ss_dssp CSHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 8876654 55555543
No 71
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=100.00 E-value=2.1e-46 Score=378.44 Aligned_cols=304 Identities=17% Similarity=0.165 Sum_probs=224.1
Q ss_pred cceeEEEEEEEe---------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 2 VTINAVKARQIF---------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 2 ~~I~~v~~~~i~---------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
|||++|+++.+. ++.+ ...++|+|+||+|++|||++.... + . .+..++..
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~~a~~~~~~~~~v~V~v~td~G~~G~GE~~~~~----~-----------~--~~~~~~~~ 63 (372)
T 3tj4_A 1 MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHA----H-----------L--PSDRLITS 63 (372)
T ss_dssp CBEEEEEEEEEEEECC------------EEEEEEEEEEETTSCEEEEEEEECC----C-----------H--HHHHHHHH
T ss_pred CEEEEEEEEEEEecCCCCccCCCccccCceeEEEEEEEECCCCEEEEeccCcc----c-----------c--CcHHHHHH
Confidence 699999998773 1222 246999999999999998643210 0 0 01234455
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccc--cccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCC
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQ--KLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNK 146 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~--~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~ 146 (445)
.|++.++|.|+|+||.+++++|+.|++... + .+++ ++..+|++|||+||||+.||.+|+|||+||| |..
T Consensus 64 ~i~~~l~p~liG~d~~~~~~~~~~l~~~~~-----~-~~~g~~g~~~~A~said~AlwDl~gk~~g~Pv~~llG---g~~ 134 (372)
T 3tj4_A 64 CISDCYAPLLLGEDASDHSRLWTKLARYPS-----L-QWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLG---GAR 134 (372)
T ss_dssp HHHHTTHHHHTTSBTTCHHHHHHHHHTCHH-----H-HTTCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCS
T ss_pred HHHHHHHHHhCCCChhhHHHHHHHHHHhhH-----h-hcCCcccHHHHHHHHHHHHHHHHhccccCCcHHHHcC---CCC
Confidence 677789999999999999999999983221 0 0112 4456899999999999999999999999999 977
Q ss_pred cceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCccCc
Q 013317 147 TLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQES 225 (445)
Q Consensus 147 ~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~ 225 (445)
+.++|+ |.++ +|... . ..++.++++.+...+ ||+++ |.|+|. ++.+.+
T Consensus 135 ~~~v~~--y~s~-~~~~~---~---------~~~~~~~~a~~~~~~~G~~~~----K~Kvg~------------~~~~~d 183 (372)
T 3tj4_A 135 TAGVEA--YNTD-IGWLS---F---------TLEDLLAGSARAVEEDGFTRL----KIKVGH------------DDPNID 183 (372)
T ss_dssp CSCEEE--EECT-TCCTT---S---------CHHHHHHHHHHHHHTTCCCEE----EEECCC------------SSHHHH
T ss_pred CCCeEE--EEec-CCccC---C---------CHHHHHHHHHHHHHccCCCEE----EEcCCC------------CCHHHH
Confidence 665665 5542 22110 0 112334555555555 67655 345542 112223
Q ss_pred hHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCC
Q 013317 226 YEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFD 305 (445)
Q Consensus 226 ~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~ 305 (445)
.+.+++||++ +| +++.|++|+ |++||.+++++++ +.++++++.|||||++
T Consensus 184 ~~~v~avR~~---~g--~~~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i~~iEqP~~ 233 (372)
T 3tj4_A 184 IARLTAVRER---VD--SAVRIAIDG------------------------NGKWDLPTCQRFC-AAAKDLDIYWFEEPLW 233 (372)
T ss_dssp HHHHHHHHHH---SC--TTCEEEEEC------------------------TTCCCHHHHHHHH-HHTTTSCEEEEESCSC
T ss_pred HHHHHHHHHH---cC--CCCcEEeeC------------------------CCCCCHHHHHHHH-HHHhhcCCCEEECCCC
Confidence 4444444443 45 579999999 4678999999875 4589999999999999
Q ss_pred ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCC-CC
Q 013317 306 QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHR-SG 384 (445)
Q Consensus 306 ~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~-~~ 384 (445)
++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++++. +.
T Consensus 234 ~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~g~~~ 310 (372)
T 3tj4_A 234 YDDVTSHARLARNTS--IPIALGEQL-YTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMS 310 (372)
T ss_dssp TTCHHHHHHHHHHCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCCBCCCCTTTT
T ss_pred chhHHHHHHHHhhcC--CCEEeCCCc-cCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCchHH
Confidence 999999999999998 999999984 67999999999999999999999999999999999999999999865441 23
Q ss_pred CChhHHHHHHHhhhc
Q 013317 385 ETEDTFIADLSVGLA 399 (445)
Q Consensus 385 et~~~~~~~la~a~~ 399 (445)
+ +.+|++.++.
T Consensus 311 ~----~~~~l~aa~~ 321 (372)
T 3tj4_A 311 Q----VHVHLSYWHP 321 (372)
T ss_dssp T----THHHHHHHCT
T ss_pred H----HHHHHhhhCC
Confidence 3 3578877754
No 72
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=100.00 E-value=1.8e-46 Score=385.63 Aligned_cols=306 Identities=18% Similarity=0.181 Sum_probs=222.9
Q ss_pred cceeEEEEEEEec----------CCC----CCeEEEEEEeCC--CcEEEEeccCCCccccccceeeccCCcccCCccHHH
Q 013317 2 VTINAVKARQIFD----------SRG----NPTVEVDVSLSD--GTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLK 65 (445)
Q Consensus 2 ~~I~~v~~~~i~~----------~~g----~~~v~V~V~td~--G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~ 65 (445)
|||++|+++.+.- +.. ...++|+|+||+ |++|+|++... +.+...
T Consensus 5 mkI~~i~~~~v~~p~~~~~~~s~~~~~~~~~~~~~V~i~Td~~dG~~G~Ge~~~~-------------------g~~~~~ 65 (441)
T 4a35_A 5 GRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTL-------------------GKGTEV 65 (441)
T ss_dssp CBEEEEEEEEEECCGGGTTCCCCSSCSSCCCEEEEEEEEESSCSCCCEEEEEEEC-------------------STTHHH
T ss_pred CEEEEEEEEEEEecCCCCCCCccceeccCcceEEEEEEEECCCCCCEEEEeeeCC-------------------CCChHH
Confidence 7999999998841 111 246999999998 99999965431 111334
Q ss_pred HHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCcccc-c-cccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhh
Q 013317 66 AVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGW-C-KQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLA 143 (445)
Q Consensus 66 a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~-~-~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~ 143 (445)
+...+ +.++|.|+|+||.+++++|+.|++.+.... .+.| | .+++...|+||||+||||+.||.+|+|||+|||
T Consensus 66 ~~~~i-~~l~~~liG~d~~~i~~~~~~~~~~l~~~~-~~~~~g~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLG--- 140 (441)
T 4a35_A 66 VVCAV-NALAHHVLNKDLKDIVGDFRGFYRQLTSDG-QLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLV--- 140 (441)
T ss_dssp HHHHH-HHHGGGTTTCBHHHHHTTHHHHHHHHHSCT-TGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHH---
T ss_pred HHHHH-HHHHHHhCCCCHHHHHHHHHHHHHHHhhcc-ceeecCCCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---
Confidence 44445 569999999999999877766664443211 1112 2 133446899999999999999999999999999
Q ss_pred CCCcceee---------------------------------------eeeEEeecCCccCCCcccccceeeccCCcccHH
Q 013317 144 GNKTLVLP---------------------------------------VPAFNVINGGSHADNKLAMQEFMILPIGASTFK 184 (445)
Q Consensus 144 G~~~~~ip---------------------------------------~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ 184 (445)
|+.+++++ +|.|++. +|+.. .+ +++..+
T Consensus 141 G~~r~~i~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~p~y~~~-~g~~~---~~---------~e~~~~ 207 (441)
T 4a35_A 141 DMDPRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTS-CAWLG---YS---------DDTLKQ 207 (441)
T ss_dssp HSCHHHHHTTCCCTTTTTTCCHHHHHHHHHHTTTTHHHHHHHHHHHCEEEEECT-TCCTT---CC---------HHHHHH
T ss_pred CCCcccceecccccccccccchhhhhhhhhhcccccchhhhhhcccCcceEEec-cccCC---CC---------HHHHHH
Confidence 87655543 4556642 12211 01 122344
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcce
Q 013317 185 EAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTY 264 (445)
Q Consensus 185 ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y 264 (445)
++.+...+||+++ |.|+|. +.+.+.++++++|+++ | +++.|++|+
T Consensus 208 ~a~~~~~~Gf~~~----KlKvG~-------------~~~~d~~~v~avR~a~---G--~~~~l~vDa------------- 252 (441)
T 4a35_A 208 LCAQALKDGWTRF----KVKVGA-------------DLQDDMRRCQIIRDMI---G--PEKTLMMDA------------- 252 (441)
T ss_dssp HHHHHHHTTCCEE----EEECSS-------------CHHHHHHHHHHHHHHH---C--TTSEEEEEC-------------
T ss_pred HHHHHHHCCCCEE----EEcCCC-------------CHHHHHHHHHHHHHHh---C--CCCeEEEEC-------------
Confidence 5555555667655 345441 2233455555555554 6 579999999
Q ss_pred eecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHH---hCCceEEEeccccccCHHHHHHH
Q 013317 265 DLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGK---IGRHVQIVGDDLLVTNPKRVEKA 341 (445)
Q Consensus 265 ~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~---~~~~~pI~gde~~~~~~~~~~~~ 341 (445)
|+.||.+++++++ +.+++|++.|||||++++|++++++|+++ ++ +||++||+. .++++++++
T Consensus 253 -----------N~~~~~~~A~~~~-~~L~~~~~~~iEeP~~~~d~~~~~~l~~~l~~~~--iPIa~gE~~-~~~~~~~~~ 317 (441)
T 4a35_A 253 -----------NQRWDVPEAVEWM-SKLAKFKPLWIEEPTSPDDILGHATISKALVPLG--IGIATGEQC-HNRVIFKQL 317 (441)
T ss_dssp -----------TTCCCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHHHHHHHHHHGGGT--CEEEECTTC-CSHHHHHHH
T ss_pred -----------CCCCCHHHHHHHH-HhhcccCccEEeCCCCcccHHHHHHHHHhccCCC--CCEEeCCcc-ccHHHHHHH
Confidence 5778999999985 56899999999999999999999999998 66 999999985 679999999
Q ss_pred HhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHH-HHHHHh
Q 013317 342 IKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTF-IADLSV 396 (445)
Q Consensus 342 i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~-~~~la~ 396 (445)
++.+++|++|+|++++||||++++++++|+++|+++ .+|.+ ..+.+. .+||++
T Consensus 318 l~~~a~div~~d~~~~GGit~~~kia~lA~~~gv~v-~~H~~-~ig~aa~~~hl~~ 371 (441)
T 4a35_A 318 LQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPV-CPHAG-GVGLCELVQHLII 371 (441)
T ss_dssp HHTTCCSEECCCTTTSSHHHHHHHHHHHHHHTTCCB-CCCCC-TTTHHHHHHHHHH
T ss_pred HHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEE-EEeCC-hHHHHHHHHHHhh
Confidence 999999999999999999999999999999999997 57743 333433 346653
No 73
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=100.00 E-value=9.4e-46 Score=375.12 Aligned_cols=299 Identities=18% Similarity=0.259 Sum_probs=229.1
Q ss_pred cceeEEEEEEEe---------cCCC-----CCeEEEEEEeCCCcEEEEec-cCCCccccccceeeccCCcccCCccHHHH
Q 013317 2 VTINAVKARQIF---------DSRG-----NPTVEVDVSLSDGTLARAAV-PSGASTGIYEALELRDGGWDYHGRGVLKA 66 (445)
Q Consensus 2 ~~I~~v~~~~i~---------~~~g-----~~~v~V~V~td~G~~G~g~~-~~~~~~g~~e~~~~~d~~~~y~~~~~~~a 66 (445)
|||++|+++.+. .+.+ +..++|+|+||+|++|||++ |.+. .|.+++..++
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~~s~g~~~~~~~~~~V~v~td~G~~G~GE~~~~~~---------------~~~~e~~~~~ 67 (386)
T 3fv9_G 3 LKITRIDIHRTDLPVRGGVYRLSGGREYHSYDATIVSIETDTGLTGWGESTPFGS---------------TYIAAHAGGT 67 (386)
T ss_dssp CCEEEEEEEEEEEEBSSSCEEETTTEEESEEEEEEEEEEETTSCEEEEEECCSTT---------------SSSSCCHHHH
T ss_pred CEEEEEEEEEEEeecCCCceEecCceEEeeeeEEEEEEEECCCCEEEEecccCCC---------------ccCcccHHHH
Confidence 899999998773 1223 24699999999999999954 3321 2556666777
Q ss_pred HHHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCC
Q 013317 67 VQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNK 146 (445)
Q Consensus 67 ~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~ 146 (445)
.+.|+ .++|.|+|+||.+++++|+.|.+.+.+ ..+|++|||+||||+.||.+|+|||+||| |..
T Consensus 68 ~~~l~-~l~~~l~G~d~~~~~~~~~~l~~~~~g------------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~ 131 (386)
T 3fv9_G 68 RAALE-LLAPAILGMDPRQHDRIWDRMRDTLKG------------HRDARAALDIACWDIAAQAAGLPLCDMTG---GRV 131 (386)
T ss_dssp HHHHH-HHHHHHTTSCTTCHHHHHHHHHHHCSS------------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCC
T ss_pred HHHHH-HHHHHhCCCCcCCHHHHHHHHHHHhcC------------cHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCC
Confidence 77774 599999999999999999999843321 14799999999999999999999999999 987
Q ss_pred cceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCch
Q 013317 147 TLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESY 226 (445)
Q Consensus 147 ~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~ 226 (445)
++++|+ |.+++.+ + +++..+++.+...+||+++ |.|+|.. .. ..+..
T Consensus 132 ~~~v~~--y~s~~~~-------~---------~e~~~~~a~~~~~~G~~~~----K~Kvg~~-------~~----~~~~~ 178 (386)
T 3fv9_G 132 AGPVPV--ISSIGGD-------T---------PEAMRAKVARHRAQGFKGH----SIKIGAS-------EA----EGGPA 178 (386)
T ss_dssp SSCBCE--EEEECSC-------C---------HHHHHHHHHHHHHTTCCEE----EEECCCC-------TT----TTHHH
T ss_pred CCceee--eEecCCC-------C---------HHHHHHHHHHHHHCCCCEE----EEeccCC-------CC----CCCHH
Confidence 777776 4433211 1 1223445555555667655 4565521 00 01124
Q ss_pred HHHHHHHHHHHh-cCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhh-hcCCeeEEECCC
Q 013317 227 EGFELLKTAIAK-GGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI-SDHPIVSIEDPF 304 (445)
Q Consensus 227 ~~l~~v~~ai~~-~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~-~~~~i~~iEdP~ 304 (445)
+.++.+ +++|+ +| +++.|++|+ |+.||.+++++++. .+ +++++ |||||+
T Consensus 179 ~d~~~v-~avR~a~G--~~~~L~vDa------------------------N~~~~~~~A~~~~~-~l~~~~~i-~iEeP~ 229 (386)
T 3fv9_G 179 LDAERI-TACLADRQ--PGEWYLADA------------------------NNGLTVEHALRMLS-LLPPGLDI-VLEAPC 229 (386)
T ss_dssp HHHHHH-HHHTTTCC--TTCEEEEEC------------------------TTCCCHHHHHHHHH-HSCSSCCC-EEECCC
T ss_pred HHHHHH-HHHHHHcC--CCCeEEEEC------------------------CCCCCHHHHHHHHH-HhhccCCc-EEecCC
Confidence 455666 44554 56 689999999 56789999998754 57 78999 999999
Q ss_pred CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCC
Q 013317 305 DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSG 384 (445)
Q Consensus 305 ~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~ 384 (445)
+ |++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++|+ .
T Consensus 230 ~--~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~-~ 303 (386)
T 3fv9_G 230 A--SWAETKSLRARCA--LPLLLDELI-QTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQDT-V 303 (386)
T ss_dssp S--SHHHHHHHHTTCC--SCEEESTTC-CSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECS-S
T ss_pred C--CHHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEeCCC-C
Confidence 8 8999999999988 999999985 67999999999999999999999999999999999999999999999995 6
Q ss_pred CChhHHHH--HHHhhhc
Q 013317 385 ETEDTFIA--DLSVGLA 399 (445)
Q Consensus 385 et~~~~~~--~la~a~~ 399 (445)
|+.++..+ ||+.++.
T Consensus 304 es~i~~aa~~hlaaa~~ 320 (386)
T 3fv9_G 304 GSQISFAAILHLAQSTP 320 (386)
T ss_dssp CCHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 88776544 5555443
No 74
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=100.00 E-value=3.6e-46 Score=378.70 Aligned_cols=300 Identities=17% Similarity=0.200 Sum_probs=225.3
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||||++|+++.+. .+.+ +..++|+|+||+|++|||++.... .+. +.+..++
T Consensus 9 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-~~~--------------~~~~~~~-- 71 (392)
T 3ddm_A 9 SITPARVRAHVFRYPVSTPVKTSFGTMHDRPAVLVEVEDSDGAVGWGEVWCNF-PAC--------------GAEHRAR-- 71 (392)
T ss_dssp CBCCCEEEEEEEEEEC-----------CEEEEEEEEEECTTSCEEEEECCCCS-STT--------------HHHHHHH--
T ss_pred CCEEEEEEEEEEeccCCCcccCcCceeecceEEEEEEEECCCCEEEEEeccCC-CCC--------------chHHHHH--
Confidence 6899999998773 2222 356999999999999999763100 000 1112222
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHh----hccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhC
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQ----LDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAG 144 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~----l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G 144 (445)
.|++.++|.|+|+||.+++++|+.|.+. ... .|..+...+|++|||+||||+.||.+|+|||+||| |
T Consensus 72 ~i~~~l~p~liG~d~~~~~~~~~~l~~~~~~~~~~------~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g 142 (392)
T 3ddm_A 72 LVETVLAPLLTARAFADPAQAFAHLEARTAVLAIQ------TGEPGPLAQAIAGLDIALCDLAARRAGQPLWAWLG---G 142 (392)
T ss_dssp HHHHTHHHHHTTSCBSSHHHHHHHHHHTTHHHHHH------HTCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---C
T ss_pred HHHHHHHHHhCCCCcCCHHHHHHHHHhhhhhhhhh------cCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---C
Confidence 4577899999999999999999999832 110 01122345799999999999999999999999999 8
Q ss_pred CCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccC
Q 013317 145 NKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQE 224 (445)
Q Consensus 145 ~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~ 224 (445)
.. +++|+ |++ |. . +++..+++.+...+||+++ |.|+|. +.+.
T Consensus 143 ~~-~~v~~--y~~---g~------~---------~e~~~~~a~~~~~~G~~~i----KlK~g~-------------~~~~ 184 (392)
T 3ddm_A 143 SG-DRIGV--YAS---GI------N---------PENPEDVVARKAAEGYRAF----KLKVGF-------------DDAR 184 (392)
T ss_dssp SC-CEEEE--EEE---EE------C---------SSSHHHHHHHHHHHTCCCE----EEECSS-------------CHHH
T ss_pred CC-CceeE--Eee---cC------C---------HHHHHHHHHHHHHcCCCEE----EEecCC-------------CHHH
Confidence 76 67776 543 21 1 1233455666666677655 345541 2233
Q ss_pred chHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCC
Q 013317 225 SYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPF 304 (445)
Q Consensus 225 ~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~ 304 (445)
+.+.+++||+++ | +++.|++|+ |++||.++++++. +.++++++.|||||+
T Consensus 185 d~~~v~avR~a~---g--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~~iEeP~ 234 (392)
T 3ddm_A 185 DVRNALHVRELL---G--AATPLMADA------------------------NQGWDLPRARQMA-QRLGPAQLDWLEEPL 234 (392)
T ss_dssp HHHHHHHHHHHH---C--SSSCEEEEC------------------------TTCCCHHHHHHHH-HHHGGGCCSEEECCS
T ss_pred HHHHHHHHHHhc---C--CCceEEEeC------------------------CCCCCHHHHHHHH-HHHHHhCCCEEECCC
Confidence 455555555554 5 579999999 5678999999874 568999999999999
Q ss_pred CccC-HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCC
Q 013317 305 DQDD-WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRS 383 (445)
Q Consensus 305 ~~~D-~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~ 383 (445)
+++| ++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++ +|+
T Consensus 235 ~~~d~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~- 309 (392)
T 3ddm_A 235 RADRPAAEWAELAQAAP--MPLAGGENI-AGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLRYC-PHY- 309 (392)
T ss_dssp CTTSCHHHHHHHHHHCS--SCEEECTTC-CSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHTTCEEC-CEE-
T ss_pred CccchHHHHHHHHHhcC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEE-ecC-
Confidence 9999 999999999998 999999984 7799999999999999999999999999999999999999999985 775
Q ss_pred CCChhHH--HHHHHhhhc
Q 013317 384 GETEDTF--IADLSVGLA 399 (445)
Q Consensus 384 ~et~~~~--~~~la~a~~ 399 (445)
.|+.++. .+||+.+++
T Consensus 310 ~~~~i~~aa~~hl~aa~p 327 (392)
T 3ddm_A 310 LGAGIGLQASAHLLAAVP 327 (392)
T ss_dssp CSCHHHHHHHHHHHHHSC
T ss_pred CchHHHHHHHHHHHHhCC
Confidence 5787654 455655543
No 75
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=100.00 E-value=4.6e-46 Score=382.40 Aligned_cols=314 Identities=14% Similarity=0.145 Sum_probs=223.9
Q ss_pred cceeEEEEEEEec-------CCC-----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIFD-------SRG-----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~~-------~~g-----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+.- +.| ...++|+|+||+|++|+|+++. + ......
T Consensus 28 mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~G~~G~GE~~g--------------------~---~~~~~~ 84 (445)
T 3vdg_A 28 IRITGARVTPVAFADPPLLNTVGVHQPYALRAVIQLDTDAGLTGLGETYA--------------------D---TVHLER 84 (445)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEECC--------------------C---HHHHHH
T ss_pred CEEEEEEEEEEecCCccccccccccccceeEEEEEEEECCCCeEEEeCCC--------------------h---HHHHHH
Confidence 8999999998842 222 2348999999999999987642 1 122334
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCcccccccc------ccchhHHHHHHHHHHHHHHhcCCchHHHHHhhh
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQK------LGANAILAVSLAVCKAGAMVKKIPLYQHIANLA 143 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~------~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~ 143 (445)
| +.++|.|+|+||.+++++|+.|++.+.+....-.+|+.+ +...|++|||+||||+.||.+|+|||+|||
T Consensus 85 i-~~l~p~LiG~d~~~ie~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG--- 160 (445)
T 3vdg_A 85 L-QAAAHAIVGRSVFSTNVIRALISDALGGDRTGDGSGLAGMITSASVVDRVFSPFEVACLDVQGQVTGRPVSDLLG--- 160 (445)
T ss_dssp H-HHHHHHHTTCBTTCHHHHHHHHHHHHTSCCCSCCTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT---
T ss_pred H-HHHHHHhCCCChhhHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---
Confidence 5 469999999999999999999985443211000011212 345799999999999999999999999999
Q ss_pred CCCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCc
Q 013317 144 GNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNI 222 (445)
Q Consensus 144 G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~ 222 (445)
|..++++|++.|....-..+ ++. .......+..+++.++++.+...+ ||+++ |.|+|. .+.
T Consensus 161 G~~r~~v~~~a~~~~~~~~~-~g~-~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~----KlKvG~------------~~~ 222 (445)
T 3vdg_A 161 GAVRDAVPFSAYLFYKWAAH-PGA-EPDGWGAALDPDGIVAQARRMIDEYGFSAI----KLKGGV------------FAP 222 (445)
T ss_dssp CCSSSEEEBCEEEECBCSSS-TTS-CCCSSCCBCSHHHHHHHHHHHHHHHCCSSE----EEECSS------------SCH
T ss_pred CCCCCeEEEeeeeccccccc-CCc-cccccccCCCHHHHHHHHHHHHHhcCCCEE----EECCCC------------CCH
Confidence 98888899865432110000 000 000000001123345555555543 67655 345442 112
Q ss_pred cCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEEC
Q 013317 223 QESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIED 302 (445)
Q Consensus 223 ~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEd 302 (445)
+.+.+++++||+++ +++.|+||+ |+.||.++++++. +.++++ +.||||
T Consensus 223 ~~Di~~v~avRea~------~d~~L~vDa------------------------N~~w~~~~Ai~~~-~~L~~~-l~~iEe 270 (445)
T 3vdg_A 223 EEEMAAVEALRAAF------PDHPLRLDP------------------------NAAWTPQTSVKVA-AGLEGV-LEYLED 270 (445)
T ss_dssp HHHHHHHHHHHHHC------TTSCEEEEC------------------------TTCSCHHHHHHHH-HHTTTT-CSEEEC
T ss_pred HHHHHHHHHHHHhC------CCCcEEEEC------------------------CCCCCHHHHHHHH-HHHhhH-HHeeeC
Confidence 22344454444443 578999999 5789999999985 457999 999999
Q ss_pred CCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCC
Q 013317 303 PFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~ 382 (445)
|++ |++++++|+++++ +||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++ +|.
T Consensus 271 P~~--~~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~l~~~a~div~~d~~~~GGitea~kia~lA~~~gv~v~-~h~ 344 (445)
T 3vdg_A 271 PTP--GLDGMAEVAAQAP--MPLATNMC-VVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRSRLLAGICDTFGLGLS-MHS 344 (445)
T ss_dssp CSS--SHHHHHHHHHHCS--SCEEESSS-CCSGGGHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEE-ECC
T ss_pred CCC--CHHHHHHHHhcCC--CCEEcCCc-CCCHHHHHHHHHcCCCCEEeeCcceeCCHHHHHHHHHHHHHcCCEEE-EeC
Confidence 995 8999999999998 99999998 47799999999999999999999999999999999999999999976 555
Q ss_pred CCCChhHHH--HHHHhhh
Q 013317 383 SGETEDTFI--ADLSVGL 398 (445)
Q Consensus 383 ~~et~~~~~--~~la~a~ 398 (445)
+.|+.++.+ +||++++
T Consensus 345 ~~e~~i~~aa~~hlaaa~ 362 (445)
T 3vdg_A 345 NSHLGISLAAMVHLAAAT 362 (445)
T ss_dssp CSCCHHHHHHHHHHHHTC
T ss_pred CcchHHHHHHHHHHHHhC
Confidence 678877654 5665543
No 76
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=100.00 E-value=1.4e-45 Score=372.65 Aligned_cols=300 Identities=20% Similarity=0.233 Sum_probs=226.0
Q ss_pred CcceeEEEEEEEe--------cCCCC-----CeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRGN-----PTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAV 67 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g~-----~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~ 67 (445)
||||++|+++.+. ++.+. ++++|+|+|++|++|||.++.. +++..++.
T Consensus 1 M~kI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~V~v~td~G~~G~Ge~~~~-------------------g~~~~~~~ 61 (371)
T 2ovl_A 1 MSLIERVRTDLYRIPLPTRLTDSTHGAMMDFELITVRIEDSDGATGLGYTYTV-------------------NHGGAAVA 61 (371)
T ss_dssp --CEEEEEEEEEEEEEEEEEBCTTTCCEEEEEEEEEEEEETTSCEEEEEEEEE-------------------SSSHHHHH
T ss_pred CCceEEEEEEEEeccCCCCCccccccccCcceEEEEEEEECCCCEEEEeecCC-------------------CCchHHHH
Confidence 8999999998772 34443 3699999999999999965431 01134555
Q ss_pred HHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 68 QNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
..|++.++|.|+|+||.+++.+|+.|.+.+.+. +++++..+|++|||+||||+.||.+|+|||+||| |. +
T Consensus 62 ~~i~~~l~~~l~G~d~~~~~~~~~~l~~~~~~~------~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~ 131 (371)
T 2ovl_A 62 TMVDKDLRGCLLGADAEQIEKIWQSMWWRLHYA------GRGGHATSAISAVDIALWDLKGIRARTPLWKLFG---GY-D 131 (371)
T ss_dssp HHHHHTTHHHHTTSCTTCHHHHHHHHHHHTCTT------CSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC-C
T ss_pred HHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhc------CCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-C
Confidence 667788999999999999999999998433321 2344557899999999999999999999999999 86 4
Q ss_pred ceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE 227 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 227 (445)
+++| +|++ +|.+. .+. ++..+++.+...+||+.+| .|.|. .+.+.+.+
T Consensus 132 ~~v~--~y~~--~~~~~---~~~---------e~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~~~~e 179 (371)
T 2ovl_A 132 PVVP--VYAG--GIDLE---LPV---------ADLKTQADRFLAGGFRAIK----MKVGR------------PDLKEDVD 179 (371)
T ss_dssp SEEE--EEEE--CCBTT---SCH---------HHHHHHHHHHHHTTCSCEE----EECCC------------SSHHHHHH
T ss_pred CCee--EEEe--CCCcC---CCH---------HHHHHHHHHHHHcCCCEEE----ECCCC------------CCHHHHHH
Confidence 5555 4654 33210 111 1224455555555665543 34431 12233355
Q ss_pred HHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCcc
Q 013317 228 GFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~ 307 (445)
.+++||+++ | +++.|++|+ |++||.+++++++. .++++++.|||||++++
T Consensus 180 ~v~avr~a~---G--~d~~l~vDa------------------------n~~~~~~~a~~~~~-~l~~~~i~~iEqP~~~~ 229 (371)
T 2ovl_A 180 RVSALREHL---G--DSFPLMVDA------------------------NMKWTVDGAIRAAR-ALAPFDLHWIEEPTIPD 229 (371)
T ss_dssp HHHHHHHHH---C--TTSCEEEEC------------------------TTCSCHHHHHHHHH-HHGGGCCSEEECCSCTT
T ss_pred HHHHHHHHh---C--CCCeEEEEC------------------------CCCCCHHHHHHHHH-HHHhcCCCEEECCCCcc
Confidence 555555554 5 579999999 46788999999854 58999999999999999
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|+++||++++||+|++++++++|+++|++++++++ .|
T Consensus 230 d~~~~~~l~~~~~--iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~~-~~-- 303 (371)
T 2ovl_A 230 DLVGNARIVRESG--HTIAGGENL-HTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTSHGV-HD-- 303 (371)
T ss_dssp CHHHHHHHHHHHC--SCEEECTTC-CSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEECSC-HH--
T ss_pred cHHHHHHHHhhCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEccccH-HH--
Confidence 9999999999998 999999985 67999999999999999999999999999999999999999999987553 22
Q ss_pred hHHHHHHHhhhc
Q 013317 388 DTFIADLSVGLA 399 (445)
Q Consensus 388 ~~~~~~la~a~~ 399 (445)
+.+||+.++.
T Consensus 304 --a~~hlaaa~~ 313 (371)
T 2ovl_A 304 --LTVHALASVP 313 (371)
T ss_dssp --HHHHHHTSCT
T ss_pred --HHHHHHhhCC
Confidence 5677776654
No 77
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=100.00 E-value=4.1e-46 Score=377.23 Aligned_cols=296 Identities=17% Similarity=0.195 Sum_probs=225.7
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. ++.+ +..++|+|+||+|++|||++.... . +...++..
T Consensus 27 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~------------------~-~~~~~~~~ 87 (383)
T 3toy_A 27 AAITGVTARAVITPMKRPLRNAFGVIDSGPLVLIDVTTDQGVTGHSYLFAYT------------------R-LALKPLVH 87 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEESSSCEEEEEEECSS------------------G-GGHHHHHH
T ss_pred CEEEEEEEEEEeccCCCcccCccccccceeEEEEEEEECCCCEEEEEeeCCC------------------C-chHHHHHH
Confidence 799999998772 3333 356999999999999999653311 0 12334455
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+.+.++|.|+|+||.+++ +|+.|.+.+.. .|++++..+|++|||+||||+.||.+|+|||+||| |.. ++
T Consensus 88 i~~~l~p~l~G~d~~~~e-~~~~l~~~~~~------~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~ 156 (383)
T 3toy_A 88 LVEDIGRELAGKALVPVD-LMKAMDAKFRL------LGWQGLVGMAVSGLDMAFWDALGQLAGKPVVELLG---GSA-RP 156 (383)
T ss_dssp HHHHHHHHTTTCBCCHHH-HHHHHHHHTTT------TCCSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC-CC
T ss_pred HHHHHHHHhCCCCCCcHH-HHHHHHHHHhh------cCCcchHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cc
Confidence 667899999999999999 99999843321 12234446899999999999999999999999999 864 55
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
+|+ |++ +|.. .+++.++++.+...+ ||+++ |.|+|. .+.+.+.+.
T Consensus 157 v~~--y~s--~g~~--------------~~e~~~~~a~~~~~~~G~~~~----KlKvG~------------~~~~~d~~~ 202 (383)
T 3toy_A 157 IPA--YDS--YGVL--------------DARDDERTLRTACDEHGFRAI----KSKGGH------------GDLATDEAM 202 (383)
T ss_dssp EEE--EEE--CSSC--------------CHHHHHHHHHHHHHTSCCCEE----EEECCS------------SCHHHHHHH
T ss_pred eEE--eEe--cCCC--------------CHHHHHHHHHHHHHccCCcEE----EEecCC------------CCHHHHHHH
Confidence 655 554 2321 112344566666656 67655 455552 122334555
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
+++||+++ | +++.|++|+ |++||.+++++++ +.++++++.|||||++++|
T Consensus 203 v~avR~a~---G--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~d 252 (383)
T 3toy_A 203 IKGLRALL---G--PDIALMLDF------------------------NQSLDPAEATRRI-ARLADYDLTWIEEPVPQEN 252 (383)
T ss_dssp HHHHHHHH---C--TTSEEEEEC------------------------TTCSCHHHHHHHH-HHHGGGCCSEEECCSCTTC
T ss_pred HHHHHHHh---C--CCCeEEEeC------------------------CCCCCHHHHHHHH-HHHHhhCCCEEECCCCcch
Confidence 55555554 5 579999999 5678999999885 5689999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +.
T Consensus 253 ~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~-~~---- 324 (383)
T 3toy_A 253 LSGHAAVRERSE--IPIQAGENW-WFPRGFAEAIAAGASDFIMPDLMKVGGITGWLNVAGQADAASIPMSSHI-LP---- 324 (383)
T ss_dssp HHHHHHHHHHCS--SCEEECTTC-CHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCCBCCCS-CH----
T ss_pred HHHHHHHHhhcC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecC-HH----
Confidence 999999999998 999999985 6799999999999999999999999999999999999999999986544 32
Q ss_pred HHHHHHHhhhc
Q 013317 389 TFIADLSVGLA 399 (445)
Q Consensus 389 ~~~~~la~a~~ 399 (445)
.+.+|++.++.
T Consensus 325 ~a~lhl~aa~p 335 (383)
T 3toy_A 325 EASAHVLPVTP 335 (383)
T ss_dssp HHHHHHGGGCT
T ss_pred HHHHHHHHhCC
Confidence 35678877653
No 78
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=9.4e-46 Score=373.96 Aligned_cols=293 Identities=15% Similarity=0.142 Sum_probs=225.9
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +++++|+|+|+ |++|||+++++ .++...
T Consensus 6 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td-G~~G~Ge~~~~-----------------------~~~~~~ 61 (372)
T 3cyj_A 6 PRVERLEVSAYTVPTDYPESDGTLQWDSTTMILVEAHGG-GRKGLGYTYGD-----------------------VSVGRF 61 (372)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEET-TEEEEEEEESC-----------------------THHHHH
T ss_pred CEEeEEEEEEEeccCCCcccCcccccccccEEEEEEEeC-CcEEEEeccCc-----------------------HHHHHH
Confidence 799999988662 2332 35689999999 99999976431 123455
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+++.++|.|+|+||.+++.+|+.|.+.++++. ++++..+|++|||+||||+.||.+|+|||+||| |. +++
T Consensus 62 i~~~l~~~l~g~d~~~~~~i~~~l~~~~~~~~------~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~-~~~ 131 (372)
T 3cyj_A 62 VESKLAGVAEGSDALSPPAVWARMQAAIRNAG------RPGVGAMAVSAVDIALWDLKARLLGLPLADALP---RF-HAE 131 (372)
T ss_dssp HHHHTHHHHTTSBTTCHHHHHHHHHHHTTTTC------SSBHHHHHHHHHHHHHHHHHHHHTTCBHHHHSC---CC-CSS
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHHHHHHhcC------CchHHHHHHHHHHHHHHHHhhhHcCCcHHHHhC---CC-CCC
Confidence 77789999999999999999999984444321 244557899999999999999999999999999 86 455
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|+ |++ +|.+. .+. ++.++++.+...++|+++| .|+|. +.+.+.+.+
T Consensus 132 vp~--~~~--~g~~~---~~~---------~~~~~~a~~~~~~G~~~~K----iKvG~-------------~~~~d~~~v 178 (372)
T 3cyj_A 132 VPV--YGS--GGFTS---YPL---------RRLQEQLGGWAAAGIPRVK----MKVGR-------------EPEKDPERV 178 (372)
T ss_dssp EEE--EEE--CCCTT---SCH---------HHHHHHHHHHHHTTCCEEE----EECCS-------------SGGGHHHHH
T ss_pred ceE--EEE--cCCCC---CCH---------HHHHHHHHHHHHcCCCEEE----EcCCC-------------CHHHHHHHH
Confidence 555 554 23221 111 2245666666666776653 45441 233446666
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcC-CeeEEECCCCccC
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH-PIVSIEDPFDQDD 308 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~-~i~~iEdP~~~~D 308 (445)
+++|+++ | +++.|++|+ |+.||.+++++++. .+++| ++.|||||++++|
T Consensus 179 ~avr~a~---g--~~~~l~vDa------------------------N~~~~~~~a~~~~~-~l~~~~~i~~iEqP~~~~d 228 (372)
T 3cyj_A 179 RAAREAI---G--ESVELMVDA------------------------NGAYTRKQALYWAG-AFAREAGISYLEEPVSSED 228 (372)
T ss_dssp HHHHHHH---C--TTSEEEEEC------------------------TTCSCHHHHHHHHH-HHHHHHCCCEEECSSCTTC
T ss_pred HHHHHHh---C--CCCeEEEEC------------------------CCCCCHHHHHHHHH-HHHhhcCCcEEECCCCccc
Confidence 6666665 5 579999999 46788999999865 58999 9999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
+++|++|+++++.++||++||++ .+..+++++ .+++|++|||++++||||++++++++|+++|++++++++ .
T Consensus 229 ~~~~~~l~~~~~~~ipIa~dE~~-~~~~~~~~~--~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~-----~ 300 (372)
T 3cyj_A 229 REGLRLLRDRGPGGVAIAAGEYE-WTLPQLHDL--AGCVDILQADVTRCGGITGLLRVDGICRGHQIPFSAHCA-----P 300 (372)
T ss_dssp HHHHHHHHHHSCTTCEEEECTTC-CSHHHHHHH--HTTCSEEEECTTTTTHHHHHTTHHHHHHHHTCCEEECSC-----H
T ss_pred HHHHHHHHHhCCCCCCEECCCCc-cCHHHHHHH--hCCCCEEecCchhhCCHHHHHHHHHHHHHcCCeecccch-----H
Confidence 99999999998734699999995 568999998 899999999999999999999999999999999987774 3
Q ss_pred HHHHHHHhhhc
Q 013317 389 TFIADLSVGLA 399 (445)
Q Consensus 389 ~~~~~la~a~~ 399 (445)
++.+|++.++.
T Consensus 301 ~a~lhlaaa~~ 311 (372)
T 3cyj_A 301 AVSAHACCAVE 311 (372)
T ss_dssp HHHHHHGGGCT
T ss_pred HHHHHHHHhCC
Confidence 55677776654
No 79
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=100.00 E-value=1.4e-45 Score=376.59 Aligned_cols=320 Identities=14% Similarity=0.106 Sum_probs=224.6
Q ss_pred CcceeEEEEEEEecCCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccC
Q 013317 1 MVTINAVKARQIFDSRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVG 80 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG 80 (445)
.|||++|++..+- ...++.++|+|+||+|++|||++... |..+++. ..+ +.|+|.|+|
T Consensus 2 ~MkI~~i~~~~~~-~~~~~~~~V~v~td~G~~G~GE~~~~-----------------~~~~~~~---~~i-~~l~p~liG 59 (409)
T 3go2_A 2 SLKVVSVDTLCCD-AGWRNYHFVKLTTDEGIVGWSEFDEG-----------------FGSPGVT---AVI-EQLGKRLVG 59 (409)
T ss_dssp CCBEEEEEEEEEE-CSSSEEEEEEEEETTCCEEEEEECST-----------------TTCTTHH---HHH-HHHHHHHTT
T ss_pred CCEEEEEEEEEEC-CCCccEEEEEEEECCCCEEEEeecCC-----------------CCcHHHH---HHH-HHHHHHhcC
Confidence 1899999998874 33456899999999999999965321 2222333 234 569999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecC
Q 013317 81 KDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVING 160 (445)
Q Consensus 81 ~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~g 160 (445)
+||.+++++|+.|++.+. ++++++..+|+|||||||||+.||.+|+|||+||| |+.++++|+ |.+..+
T Consensus 60 ~d~~~~e~~~~~~~~~~~-------~~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~s~~~ 127 (409)
T 3go2_A 60 ASVMEHERFFAEAYCLTR-------PATGGVVSEGIGAIENALLDAKAKTLNVPCYELLG---GKLRDRVPV--YWSHCP 127 (409)
T ss_dssp SBTTCHHHHHHHHHHHHG-------GGCSHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSCSEEEE--EECSTT
T ss_pred CChhhHHHHHHHHHHHhc-------cCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC---CCCCCeEEE--EEeecC
Confidence 999999999999984433 12344456899999999999999999999999999 987888887 432111
Q ss_pred CccCCCcccc-cceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCc------ccCCCCCCCCCcc-------Cch
Q 013317 161 GSHADNKLAM-QEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDAT------NVGDEGGFAPNIQ-------ESY 226 (445)
Q Consensus 161 g~~~~~~~~~-~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~------~~~~~g~~~~~~~-------~~~ 226 (445)
+... ..++. .+. ...+++..+++.+...+||+++| +|++.... ..|..+.+.++.+ .+.
T Consensus 128 ~~~i-~~~~~~~~~--~~~~e~~~~~a~~~~~~Gf~~iK----lKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~ 200 (409)
T 3go2_A 128 TWRI-NHPKFFGPP--VTDLDGVKRTAEEARERQFRAIK----TNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLR 200 (409)
T ss_dssp HHHH-HCTTTSSSC--CCSHHHHHHHHHHHHHTTCCEEE----ECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHH
T ss_pred cccc-ccccccccC--CCCHHHHHHHHHHHHHcCCCEEE----EcccccccccccccccCCCccCCcccccchHHHHHHH
Confidence 1100 00000 000 00112234455555556776653 44410000 0010000112211 113
Q ss_pred HHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCc
Q 013317 227 EGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~ 306 (445)
+.+++||++ +| +++.|++|+ |++||.+++++++ +.++++++.|||||+
T Consensus 201 e~v~avR~a---vG--~d~~l~vDa------------------------N~~~~~~~A~~~~-~~L~~~~i~~iE~P~-- 248 (409)
T 3go2_A 201 AHLEALRDG---AG--PDVEILLDL------------------------NFNAKPEGYLKIL-RELADFDLFWVEIDS-- 248 (409)
T ss_dssp HHHHHHHHH---HC--TTSEEEEEC------------------------TTCSCHHHHHHHH-HHTTTSCCSEEECCC--
T ss_pred HHHHHHHHH---hC--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHhhcCCeEEEeCc--
Confidence 344444444 46 589999999 5678999999975 567999999999997
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ +||++||+. .++++++++++.+++|++|||+++ ||||++++++++|+++|+++++ |+ .|+
T Consensus 249 ~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~-GGit~~~~ia~~A~~~gi~~~~-h~-~~s 322 (409)
T 3go2_A 249 YSPQGLAYVRNHSP--HPISSCETL-FGIREFKPFFDANAVDVAIVDTIW-NGVWQSMKIAAFADAHDINVAP-HN-FYG 322 (409)
T ss_dssp SCHHHHHHHHHTCS--SCEEECTTC-CHHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHTTCEEEE-CC-CSC
T ss_pred CCHHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHhCCCCEEEeCCCC-CCHHHHHHHHHHHHHcCCEEee-cC-CCc
Confidence 49999999999998 999999985 669999999999999999999999 9999999999999999999975 74 688
Q ss_pred hhHH--HHHHHhhhc
Q 013317 387 EDTF--IADLSVGLA 399 (445)
Q Consensus 387 ~~~~--~~~la~a~~ 399 (445)
.++. .+||+.++.
T Consensus 323 ~i~~aa~~hlaaa~p 337 (409)
T 3go2_A 323 HLCTMINANFAAAVP 337 (409)
T ss_dssp HHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCC
Confidence 7664 456655543
No 80
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=100.00 E-value=6.9e-46 Score=376.40 Aligned_cols=299 Identities=17% Similarity=0.179 Sum_probs=226.0
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. ++.+ +..++|+|+||+|++|||++.... . +....+..
T Consensus 28 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~------------------~-~~~~~~~~ 88 (390)
T 3ugv_A 28 LTFRKLTARPVLLKLQRPVTARIATIPDWPLILIDIETEEGVPGRAYLEPYV------------------P-KAMKYLVP 88 (390)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCCEEEEECCSC------------------G-GGHHHHHH
T ss_pred CEEEEEEEEEEEecCCCCccCcccccccceEEEEEEEECCCCEEEEEeecCC------------------C-chHHHHHH
Confidence 799999998772 3444 356999999999999999654311 1 12334455
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+.+.++|.|+|+||.++ ++|+.|.+.+.. .|++++..+|++|||+||||+.||.+|+|||+||| |.. ++
T Consensus 89 ~~~~l~p~liG~d~~~~-~~~~~l~~~~~~------~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~ 157 (390)
T 3ugv_A 89 ALHDMSDMLAGQPLAPA-EIYDKTRKSLHF------VGYAGLSMIAASGVDMAVWDALARAANMPLCTLLG---GTP-GS 157 (390)
T ss_dssp HHHHHHHHHTTSBCCHH-HHHHHHHHHTGG------GCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCC-CE
T ss_pred HHHHHHHHHCCCCcchH-HHHHHHHHHHHh------hCCcchHHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCC-Cc
Confidence 66789999999999999 999999843321 11234446899999999999999999999999999 864 56
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH---HHHHHHHHHHhhcCCCCcccCCCCCCCCCccCch
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVE---VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESY 226 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~---~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~ 226 (445)
+|+ |.+++ ++.. . .+++.++++.+...+ ||+++ |.|+|. .+.+.+.
T Consensus 158 v~~--y~s~g-~~~~-~-----------~~e~~~~~a~~~~~~~~~G~~~i----KlKvG~------------~~~~~d~ 206 (390)
T 3ugv_A 158 VKA--YNSNG-LWLK-S-----------PAEVAAEAVELKAEGQGTGFKGL----KLRMGR------------DDPAVDI 206 (390)
T ss_dssp EEE--EECSC-CCSS-C-----------HHHHHHHHHHHHHTTCTTCCSEE----EEECCC------------SSHHHHH
T ss_pred eEE--EEecc-cccC-C-----------CHHHHHHHHHHHHHhhhCCCcEE----EEecCC------------CCHHHHH
Confidence 665 65432 2110 0 112334555555555 67654 355542 1223345
Q ss_pred HHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCc
Q 013317 227 EGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~ 306 (445)
+.+++||+++ | +++.|++|+ |++||.+++++++ +.++++++.|||||+++
T Consensus 207 ~~v~avR~a~---G--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~ 256 (390)
T 3ugv_A 207 ETAEAVWDAV---G--RDTALMVDF------------------------NQGLDMAEAMHRT-RQIDDLGLEWIEEPVVY 256 (390)
T ss_dssp HHHHHHHHHH---C--TTSEEEEEC------------------------TTCCCHHHHHHHH-HHHTTSCCSEEECCSCT
T ss_pred HHHHHHHHHh---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhhCCCEEECCCCc
Confidence 5555555554 5 579999999 5678999999875 56899999999999999
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ +||++||+ +.++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +
T Consensus 257 ~d~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~-~--- 329 (390)
T 3ugv_A 257 DNFDGYAQLRHDLK--TPLMIGEN-FYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTHL-Y--- 329 (390)
T ss_dssp TCHHHHHHHHHHCS--SCEEECTT-CCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBCCBS-C---
T ss_pred ccHHHHHHHHHhcC--CCEEeCCC-cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecC-H---
Confidence 99999999999998 99999998 47799999999999999999999999999999999999999999986554 3
Q ss_pred hhHHHHHHHhhhc
Q 013317 387 EDTFIADLSVGLA 399 (445)
Q Consensus 387 ~~~~~~~la~a~~ 399 (445)
..+.+|++.++.
T Consensus 330 -~~a~lhl~aa~p 341 (390)
T 3ugv_A 330 -PEVGAHVMRVTE 341 (390)
T ss_dssp -HHHHHHHHTTCT
T ss_pred -HHHHHHHHHhCC
Confidence 234578777653
No 81
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=100.00 E-value=2.4e-45 Score=370.98 Aligned_cols=295 Identities=19% Similarity=0.249 Sum_probs=226.7
Q ss_pred CcceeEEEEEEEec---------CCC-----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHH
Q 013317 1 MVTINAVKARQIFD---------SRG-----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKA 66 (445)
Q Consensus 1 ~~~I~~v~~~~i~~---------~~g-----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a 66 (445)
||||++|+++.+.- +.+ +++++|+|+||+|++|||++... ++.|.+++..++
T Consensus 3 ~MkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~--------------~~~~~~~~~~~~ 68 (371)
T 2ps2_A 3 DLKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGIEGWGESTPF--------------GSNYIASHPRGV 68 (371)
T ss_dssp CCCEEEEEEEEEEECBTTSCCCCC-------EEEEEEEEEETTSCEEEEEECCS--------------TTTSSSCCHHHH
T ss_pred CCEEEEEEEEEEecccCCCCeeecccceeccCceEEEEEEECCCCEEEEEEecC--------------CcccCCCCHHHH
Confidence 37999999987741 112 24599999999999999965321 012667777888
Q ss_pred HHHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCC
Q 013317 67 VQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNK 146 (445)
Q Consensus 67 ~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~ 146 (445)
...|++ ++|.|+|+||.+++.+|+.|.+.+.+ ..+|++|||+||||+.||.+|+|||+||| |..
T Consensus 69 ~~~i~~-l~~~l~g~d~~~~~~~~~~l~~~~~~------------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~ 132 (371)
T 2ps2_A 69 RAGIAT-MAPSLIGLDPRRVDRINDAMDDALLG------------HEDAKTAIDVACWDIFGKSVGLPVCELLG---GRT 132 (371)
T ss_dssp HHHHHH-HHHHHTTSCTTCHHHHHHHHHHHCSS------------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCC
T ss_pred HHHHHH-HHHHHCCCCcccHHHHHHHHHHHhcc------------cHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC
Confidence 888876 99999999999999999999832211 24799999999999999999999999999 976
Q ss_pred cceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCch
Q 013317 147 TLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESY 226 (445)
Q Consensus 147 ~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~ 226 (445)
++++|+ |.+++++ +. ++..+++.+...+||+.+| .|.|. + ..
T Consensus 133 ~~~vp~--~~~~~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~-------------~---~~ 174 (371)
T 2ps2_A 133 NTRLPL--ISSIYVG-------EP---------EDMRARVAKYRAKGYKGQS----VKISG-------------E---PV 174 (371)
T ss_dssp SSCEEB--EEEECSC-------CH---------HHHHHHHHHHHTTTCCEEE----EECCS-------------C---HH
T ss_pred CCceEE--EEEeCCC-------CH---------HHHHHHHHHHHHhChheEE----eecCC-------------C---HH
Confidence 666665 6555332 11 1233455555445565442 34331 1 23
Q ss_pred HHHHHHHHHHHh-cCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhh-hcCCeeEEECCC
Q 013317 227 EGFELLKTAIAK-GGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI-SDHPIVSIEDPF 304 (445)
Q Consensus 227 ~~l~~v~~ai~~-~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~-~~~~i~~iEdP~ 304 (445)
..++.+ +++|+ +| +++.|++|+ |++||.+++++++. .+ +++++ |||||+
T Consensus 175 ~~~e~v-~avr~a~g--~~~~l~vDa------------------------n~~~~~~~a~~~~~-~l~~~~~i-~iE~P~ 225 (371)
T 2ps2_A 175 TDAKRI-TAALANQQ--PDEFFIVDA------------------------NGKLSVETALRLLR-LLPHGLDF-ALEAPC 225 (371)
T ss_dssp HHHHHH-HHHTTTCC--TTCEEEEEC------------------------TTBCCHHHHHHHHH-HSCTTCCC-EEECCB
T ss_pred HHHHHH-HHHHHhcC--CCCEEEEEC------------------------CCCcCHHHHHHHHH-HHHhhcCC-cCcCCc
Confidence 445555 44554 55 579999999 45688899999865 56 89999 999999
Q ss_pred CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCC
Q 013317 305 DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSG 384 (445)
Q Consensus 305 ~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~ 384 (445)
+ |++++++|+++++ +||++||+. +++++++++++.+++|++++|++++||+|++++++++|+++|++++++|+ .
T Consensus 226 ~--~~~~~~~l~~~~~--iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~ 299 (371)
T 2ps2_A 226 A--TWRECISLRRKTD--IPIIYDELA-TNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQET-C 299 (371)
T ss_dssp S--SHHHHHHHHTTCC--SCEEESTTC-CSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEECS-S
T ss_pred C--CHHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecCC-C
Confidence 8 9999999999988 999999984 78999999999999999999999999999999999999999999999886 4
Q ss_pred CChhHHHHHHHhhh
Q 013317 385 ETEDTFIADLSVGL 398 (445)
Q Consensus 385 et~~~~~~~la~a~ 398 (445)
||.++..+.++++.
T Consensus 300 es~i~~aa~~hlaa 313 (371)
T 2ps2_A 300 GSDIAFAAIVHLAQ 313 (371)
T ss_dssp CCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHH
Confidence 88876655444443
No 82
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=100.00 E-value=7.9e-46 Score=377.54 Aligned_cols=301 Identities=19% Similarity=0.253 Sum_probs=227.5
Q ss_pred CcceeEEEEEEEe--------cCC----------CCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCcc
Q 013317 1 MVTINAVKARQIF--------DSR----------GNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRG 62 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~----------g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~ 62 (445)
||||++|+++.+. .+. .+++++|+|+|++|++|||+++++. +.+
T Consensus 25 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~----------------~~~-- 86 (398)
T 2pp0_A 25 GDRIEWVKLSLAFLPLATPVSDAKVLTGRQKPLTEVAIIIAEIRSRDGFEGVGFSYSKR----------------AGG-- 86 (398)
T ss_dssp SCCEEEEEEEEEEEEEEEEECCHHHHTTSSCCEEEEEEEEEEEEETTSCEEEEEEEESS----------------TTH--
T ss_pred CCeEEEEEEEEEeccCCCcccccccccccccccCCCcEEEEEEEECCCCEEEEEecCcc----------------chH--
Confidence 3899999998773 111 1357999999999999999775421 111
Q ss_pred HHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhh
Q 013317 63 VLKAVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANL 142 (445)
Q Consensus 63 ~~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~ 142 (445)
.. +..+.+.++|.|+|+||.+++.+|+.|. ..... +++++++.+|++|||+||||+.||.+|+|||+|||
T Consensus 87 -~~-~~~~~~~l~p~l~G~d~~~~~~i~~~l~-~~~~~-----~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLG-- 156 (398)
T 2pp0_A 87 -QG-IYAHAKEIADNLLGEDPNDIDKIYTKLL-WAGAS-----VGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLG-- 156 (398)
T ss_dssp -HH-HHHHHHHHGGGGTTSCTTCHHHHHHHHH-HHTGG-----GCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHHC--
T ss_pred -HH-HHHHHHHHHHHHcCCCchhHHHHHHHHH-Hhhcc-----cCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 22 2333346999999999999999999998 43221 12345567899999999999999999999999999
Q ss_pred hCCCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCc
Q 013317 143 AGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI 222 (445)
Q Consensus 143 ~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~ 222 (445)
|. ++++| +|+++ |+.+. .+. ++..+++.+...+||+.+| .|+|. .+.
T Consensus 157 -g~-~~~vp--~y~~~-g~~~~---~~~---------e~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~ 203 (398)
T 2pp0_A 157 -AH-RDSVQ--CYNTS-GGFLH---TPL---------DQVLKNVVISRENGIGGIK----LKVGQ------------PNC 203 (398)
T ss_dssp -CS-CSEEE--EEECT-TSCTT---SCH---------HHHHHHHHHHHHTTCSCEE----EECCC------------SCH
T ss_pred -CC-CCCee--EEEec-CCcCC---CCH---------HHHHHHHHHHHHhCCCeEE----EecCC------------CCH
Confidence 86 45554 57654 33210 111 2234556665556666553 34431 122
Q ss_pred cCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEEC
Q 013317 223 QESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIED 302 (445)
Q Consensus 223 ~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEd 302 (445)
+.+.+.++.||+++ | +++.|++|+ |++||.+++++++. .+++|++.||||
T Consensus 204 ~~d~e~v~avR~av---G--~d~~l~vDa------------------------n~~~~~~~ai~~~~-~l~~~~i~~iEq 253 (398)
T 2pp0_A 204 AEDIRRLTAVREAL---G--DEFPLMVDA------------------------NQQWDRETAIRMGR-KMEQFNLIWIEE 253 (398)
T ss_dssp HHHHHHHHHHHHHH---C--SSSCEEEEC------------------------TTCSCHHHHHHHHH-HHGGGTCSCEEC
T ss_pred HHHHHHHHHHHHHc---C--CCCeEEEEC------------------------CCCCCHHHHHHHHH-HHHHcCCceeeC
Confidence 33455566665555 5 579999999 46688999999855 589999999999
Q ss_pred CCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCC
Q 013317 303 PFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~ 382 (445)
|++++|++++++|+++++ +||++||+. .++++++++++.+++|+++||++|+||||++++++++|+++|++++ +|+
T Consensus 254 P~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~gi~~~-~h~ 329 (398)
T 2pp0_A 254 PLDAYDIEGHAQLAAALD--TPIATGEML-TSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLA-PHF 329 (398)
T ss_dssp CSCTTCHHHHHHHHHHCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEEC-CCS
T ss_pred CCChhhHHHHHHHHhhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEe-ecC
Confidence 999999999999999998 999999985 6799999999999999999999999999999999999999999986 565
Q ss_pred CCCChhHHHHHHHhhhcC
Q 013317 383 SGETEDTFIADLSVGLAT 400 (445)
Q Consensus 383 ~~et~~~~~~~la~a~~~ 400 (445)
+++ .++||++++..
T Consensus 330 ~~~----~~~~laaa~~~ 343 (398)
T 2pp0_A 330 AME----VHLHLSAAYPL 343 (398)
T ss_dssp CHH----HHHHHHHTCSS
T ss_pred ccH----HHHHHHhcCCC
Confidence 544 36899887653
No 83
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=100.00 E-value=2e-45 Score=372.60 Aligned_cols=276 Identities=18% Similarity=0.184 Sum_probs=209.2
Q ss_pred CeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhc
Q 013317 19 PTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLD 98 (445)
Q Consensus 19 ~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~ 98 (445)
.+++|+|+||+|++|||++..+ ..+...+++.|+|.|+|+||.+++++|+.|++...
T Consensus 59 ~~v~V~v~td~G~~G~Ge~~~g-----------------------~~~~~~i~~~l~p~LiG~dp~~ie~i~~~m~~~~~ 115 (404)
T 3ekg_A 59 GTLVVEIEASDGNVGFAVTTGG-----------------------EPAAYIVEKHLARFLEGARVTDIERIWDQMYNSTL 115 (404)
T ss_dssp CEEEEEEEETTSCEEEEEEECH-----------------------HHHHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHG
T ss_pred cEEEEEEEECCCCEEEEeCCCc-----------------------HHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHhh
Confidence 4599999999999999865321 22344577889999999999999999999984331
Q ss_pred cCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCCccCCCcccccceeeccC
Q 013317 99 GTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPI 178 (445)
Q Consensus 99 ~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~ 178 (445)
.+|++++..+|++||||||||+.||.+|+|||+||| |+.++++|+ |++ |. .
T Consensus 116 ------~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~--g~-------~--------- 166 (404)
T 3ekg_A 116 ------YYGRKGLVINTISGVDLALWDLLGKVRREPVHQLLG---GAVRDELQF--YAT--GA-------R--------- 166 (404)
T ss_dssp ------GGCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSEEEE--EEE--SS-------C---------
T ss_pred ------hcCCCcchHHHHHHHHHHHHHHHHHHhCCCHHHHcC---CCCCCeeEE--ecC--CC-------C---------
Confidence 122344456799999999999999999999999999 987888776 443 21 0
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEecccccccc
Q 013317 179 GASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYD 258 (445)
Q Consensus 179 ~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~ 258 (445)
.+.+ ..++|+++ |.|+|... . .|. .+++.+.++++++|+++ | +++.|++|+
T Consensus 167 ----~~~~---~~~Gf~~~----K~Kv~~g~-~---~g~--~~~~~di~~v~avRea~---G--~~~~L~vDa------- 217 (404)
T 3ekg_A 167 ----PDLA---QKMGFIGG----KMPLHHGP-S---EGE--EGLKKNLEELATMRERV---G--PDFWLMFDC------- 217 (404)
T ss_dssp ----HHHH---HHTTCSEE----EEECCCCG-G---GHH--HHHHHHHHHHHHHHHHH---C--SSSEEEEEC-------
T ss_pred ----HHHH---HHcCCCEE----EEecCCCC-c---ccc--ccHHHHHHHHHHHHHHh---C--CCCeEEecC-------
Confidence 1112 12456554 34443100 0 000 01223445555555554 6 689999999
Q ss_pred ccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHH
Q 013317 259 RKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRV 338 (445)
Q Consensus 259 ~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~ 338 (445)
|+.||.+++++++ +.+++|++.|||||++++|++++++|+++++.++||++||+. .+++++
T Consensus 218 -----------------N~~w~~~~A~~~~-~~Le~~~l~~iEeP~~~~d~~~~a~l~~~~~~pi~Ia~gE~~-~~~~~~ 278 (404)
T 3ekg_A 218 -----------------WMSLDLNYATRLA-RGAREYGLKWIEEALPPDDYWGYAELRRNAPTGMMVTTGEHE-ATRWGF 278 (404)
T ss_dssp -----------------TTCCCHHHHHHHH-HHHGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTC-CHHHHH
T ss_pred -----------------CCCCCHHHHHHHH-HHHhhcCCcEEecCCCcccHHHHHHHHHhcCCCeEEEecCcc-CCHHHH
Confidence 5778999999985 457999999999999999999999999998744569999985 569999
Q ss_pred HHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhc
Q 013317 339 EKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLA 399 (445)
Q Consensus 339 ~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~ 399 (445)
+++++.+++|++|+|++++||||++++++++|+++|++++ .|.++ .+.+||++++.
T Consensus 279 ~~li~~~a~dii~~d~~~~GGitea~kia~lA~a~gv~v~-~h~~~----~a~~hl~aa~p 334 (404)
T 3ekg_A 279 RMLLEMGCCDIIQPDVGWCGGVTELLKISALADAHNALVV-PHGSS----VYSYHFVATRQ 334 (404)
T ss_dssp HHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEC-CCCCT----HHHHHHHTTCT
T ss_pred HHHHHcCCCCeEecChhhcCCccHHHHHHHHHHHcCCEEE-ecCcH----HHHHHHHHhCC
Confidence 9999999999999999999999999999999999999986 45332 36688887654
No 84
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=100.00 E-value=6e-45 Score=370.33 Aligned_cols=302 Identities=12% Similarity=0.141 Sum_probs=225.4
Q ss_pred cceeEEEEEEEec-------CCCCCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhH
Q 013317 2 VTINAVKARQIFD-------SRGNPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSII 74 (445)
Q Consensus 2 ~~I~~v~~~~i~~-------~~g~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l 74 (445)
|||++|+++.+.. +.++++++|+|+|++|++|||+++..+ +. .......|++ +
T Consensus 11 MkI~~i~~~~~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~----------------~~---~~~~~~~i~~-l 70 (391)
T 2qgy_A 11 GKLSRLKIWITDNHLSDDQWSNTKKFIIIKITTEDGIEGWGEAFSIN----------------FR---EKGIAIIIKE-L 70 (391)
T ss_dssp CCEEEEEEEEECCCBCGGGCSBCCCCEEEEEEETTCCEEEEEECCCT----------------TT---HHHHHHHHHH-H
T ss_pred CEEEEEEEEEecCccccccccCCCcEEEEEEEECCCCEEEecccCCC----------------CC---hHHHHHHHHH-H
Confidence 7999999999953 234578999999999999999665421 11 1233445666 9
Q ss_pred hhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeee
Q 013317 75 GPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPA 154 (445)
Q Consensus 75 ~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~ 154 (445)
+|.|+|+||.+++.+|+.|. .+... +..+.+ .+|++|||+||||+.||.+|+|||+||| |..++.+|+
T Consensus 71 ~p~l~G~d~~~~~~i~~~l~-~~~~~-----~~g~~~-~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~~~~vp~-- 138 (391)
T 2qgy_A 71 FREISNIPNLSIKSFYNKIS-LLSDG-----HRGLDF-SSATSAIEIALWDISGKLKNLPLNSLLT---KSPKPNVPI-- 138 (391)
T ss_dssp HHHHTTCTTCCHHHHHHHHH-HHHTT-----CCCHHH-HHHHHHHHHHHHHHHHHHHTSBHHHHHC---SSCCSEEEE--
T ss_pred HHHhcCCChhHHHHHHHHHH-hhhhh-----ccCchH-HHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCcCCCcce--
Confidence 99999999999999999998 42211 111234 6899999999999999999999999999 876666655
Q ss_pred EEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHH
Q 013317 155 FNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKT 234 (445)
Q Consensus 155 ~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ 234 (445)
|+ +|+.+.. .+. ++..+++.+...+||+.+| .|.| ..+ .+.+.+.+++||+
T Consensus 139 ~~--~g~~~~~--~~~---------~~~~~~a~~~~~~Gf~~vK----ik~g-----------~~~-~~~~~e~v~avR~ 189 (391)
T 2qgy_A 139 YA--TCWSDLK--KDT---------NDYLRQIEKFYGKKYGGIK----IYPM-----------LDS-LSISIQFVEKVRE 189 (391)
T ss_dssp EE--ECCCSSC--CCH---------HHHHHHHHHHHHTTCSCEE----ECCC-----------CSS-HHHHHHHHHHHHH
T ss_pred EE--ecccCCC--CCH---------HHHHHHHHHHHHcCCCEEE----EccC-----------CCh-HHHHHHHHHHHHH
Confidence 54 2322200 011 2234455555555665443 3332 110 1223455555555
Q ss_pred HHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHH
Q 013317 235 AIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAE 314 (445)
Q Consensus 235 ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~ 314 (445)
++ | +++.|++|+ |++||.+++++++. .++++++.|||||++++|++++++
T Consensus 190 a~---G--~d~~l~vDa------------------------n~~~~~~~a~~~~~-~l~~~~i~~iEqP~~~~d~~~~~~ 239 (391)
T 2qgy_A 190 IV---G--DELPLMLDL------------------------AVPEDLDQTKSFLK-EVSSFNPYWIEEPVDGENISLLTE 239 (391)
T ss_dssp HH---C--SSSCEEEEC------------------------CCCSCHHHHHHHHH-HHGGGCCSEEECSSCTTCHHHHHH
T ss_pred Hh---C--CCCEEEEEc------------------------CCCCCHHHHHHHHH-HHHhcCCCeEeCCCChhhHHHHHH
Confidence 44 5 579999999 46688999999854 589999999999999999999999
Q ss_pred HHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC-hhHH--H
Q 013317 315 LTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET-EDTF--I 391 (445)
Q Consensus 315 L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et-~~~~--~ 391 (445)
|+++++ +||++||+. .++++++++++.+++|++++|++++||+|++++++++|+++|++++++++ ++ .++. .
T Consensus 240 l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~--~~~~i~~aa~ 314 (391)
T 2qgy_A 240 IKNTFN--MKVVTGEKQ-SGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFISPHCW--NSMSVSASAM 314 (391)
T ss_dssp HHHHCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC--SCTTHHHHHH
T ss_pred HHhhCC--CCEEEcCCc-CCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccCC--CCcHHHHHHH
Confidence 999998 999999985 66999999999999999999999999999999999999999999877764 66 6665 4
Q ss_pred HHHHhhhc
Q 013317 392 ADLSVGLA 399 (445)
Q Consensus 392 ~~la~a~~ 399 (445)
+||+.+++
T Consensus 315 ~hlaaa~~ 322 (391)
T 2qgy_A 315 LHVCSSIP 322 (391)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhCC
Confidence 55555543
No 85
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=100.00 E-value=3.4e-46 Score=377.71 Aligned_cols=315 Identities=16% Similarity=0.144 Sum_probs=229.5
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||+| +|+++.+. .+.+ +++++|+| |++|++|||.+... +.|.+++..++..
T Consensus 2 m~~m-~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v-td~G~~G~GE~~~~---------------~~~~~e~~~~~~~ 64 (377)
T 2pge_A 2 LSGM-ELSYRRSDLIFKRPAGTSRGVLTSKPTWFVRL-DIDGHGGQGEVSLI---------------PGLSLDPEEQIGR 64 (377)
T ss_dssp -CCC-EEEEEECCEEBCC-------CCCEECEEEEEE-EETTEEEEEEEECC---------------TTTCSSCHHHHHH
T ss_pred Ccce-EEEEEEEeecccCcceeccEEEeecceEEEEE-EcCCCEEEEEeccC---------------CCCCcCCHHHHHH
Confidence 7788 88887662 2333 46899999 99999999854321 1255677888887
Q ss_pred HHHHhHhhhccCCCC------------CCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchH
Q 013317 69 NVNSIIGPALVGKDP------------TEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLY 136 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~------------~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~ 136 (445)
.++ .+.|.|+|+|| .+++.+|+.|. .++++.++|..+......+|++|||+||||+.||.+|+|||
T Consensus 65 ~l~-~~~~~l~g~d~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~~a~~aid~Al~Dl~ak~~g~Pl~ 142 (377)
T 2pge_A 65 ELD-LLARRLRAEEPIRLRQFLAERGGADFSDYRSVLT-DIAGILDSWQVSTDGRFPALRFALEMALLDLLSGGRQEWFA 142 (377)
T ss_dssp HHH-HHHHHHHHSCCHHHHHHHHHTSSCTTSCHHHHHH-HHHHHHHHTTSSTTSSCHHHHHHHHHHHHHHHHTSSSCSSC
T ss_pred HHH-HHHHHHhCCCccchhhhhhccccccHHHHHHhhh-hhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 787 68999999988 44577777775 33221111211223345689999999999999999999999
Q ss_pred HHHHhhhCCCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCC
Q 013317 137 QHIANLAGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEG 216 (445)
Q Consensus 137 ~lLG~~~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g 216 (445)
+||| |. ++++|++. +++++ +. + ..++++.+...++|+++| .|+|.
T Consensus 143 ~llG---g~-~~~vp~~~--~i~~~-------~~-e--------~~~~~a~~~~~~G~~~~K----~Kvg~--------- 187 (377)
T 2pge_A 143 SDFT---RG-EKRIPVNG--LIWMG-------EA-A--------FMQEQIEAKLAEGYGCLK----LKIGA--------- 187 (377)
T ss_dssp STTT---TT-SCCEEBCE--EECCC-------CH-H--------HHHHHHHHHHHTTCSEEE----EEC-----------
T ss_pred HHhC---CC-CCeEEEeE--EecCC-------CH-H--------HHHHHHHHHHHHhhhhhe----eecCC---------
Confidence 9999 86 56677654 44322 11 1 234566666666776553 45441
Q ss_pred CCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCC
Q 013317 217 GFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP 296 (445)
Q Consensus 217 ~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~ 296 (445)
.+.++.++.++++.+.+|+ +++.|++|+ |+.||.+++++++ +.+++|+
T Consensus 188 ------~~~~~d~~~v~avr~~~g~-~~~~l~vDa------------------------N~~~~~~~a~~~~-~~l~~~~ 235 (377)
T 2pge_A 188 ------IDFDKECALLAGIRESFSP-QQLEIRVDA------------------------NGAFSPANAPQRL-KRLSQFH 235 (377)
T ss_dssp -------CHHHHHHHHHHHHHHSCT-TTCEEEEEC------------------------TTBBCTTTHHHHH-HHHHTTC
T ss_pred ------CChHHHHHHHHHHHHHcCC-CCceEEEEC------------------------CCCCCHHHHHHHH-HHHhcCC
Confidence 1124555666443334552 369999999 4567788999985 5689999
Q ss_pred eeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHH--HHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcC
Q 013317 297 IVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKR--VEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAG 374 (445)
Q Consensus 297 i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~--~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g 374 (445)
+.|||||++++|+++|++|+++++ +||++||++++ ..+ ++++++.+++|++|||++++||||++++++++|+++|
T Consensus 236 i~~iEqP~~~~d~~~~~~l~~~~~--ipIa~dE~~~~-~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~g 312 (377)
T 2pge_A 236 LHSIEQPIRQHQWSEMAALCANSP--LAIALDEELIG-LGAEQRSAMLDAIRPQYIILKPSLLGGFHYAGQWIELARERG 312 (377)
T ss_dssp CSEEECCBCSSCHHHHHHHHHHCS--SCEEESGGGTT-CCTHHHHHHHHHHCCSEEEECHHHHTSHHHHHHHHHHHHHTT
T ss_pred CcEEEccCCcccHHHHHHHHhhCC--CcEEECCccCC-cchHHHHHHHHhCCCCEEEECchhcCCHHHHHHHHHHHHHCC
Confidence 999999999999999999999988 99999999654 566 8899999999999999999999999999999999999
Q ss_pred CcEEecCCCCCChhHHHHHHHhhhcCCcccc
Q 013317 375 WGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 375 ~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
++++++|+ .||+++.++.++++...++..+
T Consensus 313 ~~~~~~~~-~es~i~~~a~~hlaa~~~~~~~ 342 (377)
T 2pge_A 313 IGFWITSA-LESNLGLAAIAQWTALYQPTMP 342 (377)
T ss_dssp CEEEEBCC-SCCHHHHHHHHHHHHTTCCSSC
T ss_pred CeEEecCC-cccHHHHHHHHHHHHCCCCCcc
Confidence 99998886 7998887666665554444433
No 86
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=100.00 E-value=5.5e-45 Score=371.39 Aligned_cols=299 Identities=19% Similarity=0.239 Sum_probs=231.4
Q ss_pred cceeEEEEEEEec--------CCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIFD--------SRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~~--------~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+.. +.+ +++++|+|+|++|++|||++.... + +|++++..++...
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-----------~---~~~~~~~~~~~~~ 68 (397)
T 2qde_A 3 LKITKVEVIPISTPMKRAQLMRGATLARIDGVLLKLHSDEGLVGIADAGDTS-----------S---WYRGETQDSITSM 68 (397)
T ss_dssp CCEEEEEEEEEEECCCC-----------EEEEEEEEEETTSCEEEEECCCCC-----------T---TTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEeeeccCCeEeccceEeeCceEEEEEEECCCCEEEEEEeccc-----------C---ccCCCCHHHHHHH
Confidence 7999999988732 222 357999999999999998654211 0 2567778888888
Q ss_pred HHHhHhh-hccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 70 VNSIIGP-ALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 70 i~~~l~p-~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
|++.++| .|+|+||.+++.+|+.|. ... .+ ..+|++|||+||||+.||.+|+|||+||| |..++
T Consensus 69 i~~~l~~~~l~G~d~~~~~~l~~~l~-~~~----------~~-~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~~~ 133 (397)
T 2qde_A 69 ICDFFAPKVLLGEDPTKIEKIVGRMD-ILT----------RD-NNQAKATVDFALHDLVGKRFGVPVYQLLG---GKTIE 133 (397)
T ss_dssp HHHTHHHHTTTTCCTTCHHHHHHHHH-HHC----------SS-CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCS
T ss_pred HHHhhhhHhhcCCChHhHHHHHHHhh-hhh----------cc-chhHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCC
Confidence 9888999 999999999999999885 321 11 35899999999999999999999999999 97666
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
.+|+ |.++ |.. +. +...+++.+...+||+.+| .|.|. +.+.+.+.
T Consensus 134 ~vp~--~~~~--g~~-----~~---------e~~~~~a~~~~~~Gf~~vK----ik~g~-------------~~~~~~e~ 178 (397)
T 2qde_A 134 RIPL--GLVL--GAG-----EP---------EAVAEEALAVLREGFHFVK----LKAGG-------------PLKADIAM 178 (397)
T ss_dssp SEEB--CEEC--CCS-----CH---------HHHHHHHHHHHHHTCSCEE----EECCS-------------CHHHHHHH
T ss_pred Ccce--EEEC--CCC-----CH---------HHHHHHHHHHHHhhhhhee----ecccC-------------CHHHHHHH
Confidence 6665 4443 210 11 2234556665566676553 34431 12223455
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
+++||+++ | +++.|++|+ |++||.+++++++ +.++++++.|||||++++|
T Consensus 179 v~avR~a~---g--~d~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~~ 228 (397)
T 2qde_A 179 VAEVRRAV---G--DDVDLFIDI------------------------NGAWTYDQALTTI-RALEKYNLSKIEQPLPAWD 228 (397)
T ss_dssp HHHHHHHH---C--TTSCEEEEC------------------------TTCCCHHHHHHHH-HHHGGGCCSCEECCSCTTC
T ss_pred HHHHHHhh---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhCCCCEEECCCChhh
Confidence 55555554 5 579999999 4668899999985 5689999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|++++++++ .|+.+
T Consensus 229 ~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i 304 (397)
T 2qde_A 229 LDGMARLRGKVA--TPIYADESA-QELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGCM-VGSGL 304 (397)
T ss_dssp HHHHHHHHTTCS--SCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCC-SCCHH
T ss_pred HHHHHHHHhhCC--CCEEEeCCc-CCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEecC-cccHH
Confidence 999999999987 999999985 66999999999999999999999999999999999999999999987764 68877
Q ss_pred HHH--HHHHhhh
Q 013317 389 TFI--ADLSVGL 398 (445)
Q Consensus 389 ~~~--~~la~a~ 398 (445)
+.. +||+.++
T Consensus 305 g~aa~~hlaa~~ 316 (397)
T 2qde_A 305 EASPAAHLLAAN 316 (397)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 654 4555543
No 87
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=100.00 E-value=5.4e-45 Score=374.28 Aligned_cols=302 Identities=17% Similarity=0.204 Sum_probs=232.1
Q ss_pred cceeEEEEEEE--------ecCCCC------CeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHH
Q 013317 2 VTINAVKARQI--------FDSRGN------PTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAV 67 (445)
Q Consensus 2 ~~I~~v~~~~i--------~~~~g~------~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~ 67 (445)
|||++|+++.+ .+|++. ++++|+|+||+|++|+|+++.+ ++.+++.
T Consensus 39 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~v~V~v~td~G~~G~GE~~~g--------------------~~~~~~~ 98 (428)
T 3bjs_A 39 MKITKINAIPLSYRLPEGKTVTMGVGSTIKRDAIIIRVETSEGITGYGEAHPG--------------------RSPGAIT 98 (428)
T ss_dssp CBEEEEEEEEEEEECC---CCBCSSCBCSEEEEEEEEEEETTSCEEEEEECCT--------------------TCHHHHH
T ss_pred CEEeEEEEEEEecccCCcccccccccccccccEEEEEEEECCCCEEEEEecCC--------------------CCHHHHH
Confidence 79999999988 345554 6799999999999999965431 1245666
Q ss_pred HHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 68 QNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
..|++.++|.|+|+||.+++.+|+.|.+.... + .++.++..+|++||||||||+.||.+|+|||+||| |. +
T Consensus 99 ~~i~~~l~p~liG~d~~~~~~i~~~l~~~~~~--~---~~~~g~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~-~ 169 (428)
T 3bjs_A 99 SLIHNTIAPMLIGMKATDCVGAWQRVHRMQLS--S---HGLGAGAALAISGIDMALWDIRGKAANMPLYELLG---GS-K 169 (428)
T ss_dssp HHHHHTTTTTTTTSBTTCHHHHHHHHHHHTTT--T---TSCTHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CC-C
T ss_pred HHHHHHHHHHhCCCCccCHHHHHHHHHHhhhh--c---cCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC-C
Confidence 77887899999999999999999999722110 1 11233456899999999999999999999999999 86 5
Q ss_pred ceeeeeeEEeecCCccCCCcccccceeeccCC-cccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCch
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQEFMILPIG-ASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESY 226 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~-~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~ 226 (445)
+++|+ |++ |..+. ..+ +..++++.+...+||+.+| .|.|. +.+.+.
T Consensus 170 ~~vp~--~~s--g~~~~------------~~~~e~~~~~a~~~~~~Gf~~vK----ik~g~-------------~~~~d~ 216 (428)
T 3bjs_A 170 RRIPA--YAG--GIALG------------YQPKESLAEEAQEYIARGYKALK----LRIGD-------------AARVDI 216 (428)
T ss_dssp CCEEE--EEE--SSCSC------------SCCHHHHHHHHHHHHHHTCSEEE----EECCS-------------CHHHHH
T ss_pred Cceee--eee--ccccC------------CChHHHHHHHHHHHHHCCCCEEE----ECCCC-------------CHHHHH
Confidence 55554 654 22111 111 2234566666666776553 34431 123334
Q ss_pred HHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCc
Q 013317 227 EGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~ 306 (445)
+.+++||+++ | +++.|++|+ |++||.+++++++ +.+++|++.|||||+++
T Consensus 217 e~v~avR~av---G--~d~~l~vDa------------------------n~~~~~~eai~~~-~~L~~~~i~~iEqP~~~ 266 (428)
T 3bjs_A 217 ERVRHVRKVL---G--DEVDILTDA------------------------NTAYTMADARRVL-PVLAEIQAGWLEEPFAC 266 (428)
T ss_dssp HHHHHHHHHH---C--TTSEEEEEC------------------------TTCCCHHHHHHHH-HHHHHTTCSCEECCSCT
T ss_pred HHHHHHHHhc---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEECCCCc
Confidence 5555555554 5 579999999 4668899999985 45899999999999999
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ ++||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|++++++ +.||
T Consensus 267 ~d~~~~~~l~~~~~-~iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~--~~es 342 (428)
T 3bjs_A 267 NDFASYREVAKITP-LVPIAAGENH-YTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMASAYRIPINAH--SSAT 342 (428)
T ss_dssp TCHHHHHHHTTTCS-SSCEEECTTC-CSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB--CCSS
T ss_pred cCHHHHHHHHHhCC-CCcEEcCCCc-CCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEec--CCCc
Confidence 99999999998864 3999999985 669999999999999999999999999999999999999999998655 6799
Q ss_pred hhHHH--HHHHhhhc
Q 013317 387 EDTFI--ADLSVGLA 399 (445)
Q Consensus 387 ~~~~~--~~la~a~~ 399 (445)
.++.+ +||++++.
T Consensus 343 ~i~~~a~~hlaaa~~ 357 (428)
T 3bjs_A 343 GLNHAATIHFLAATE 357 (428)
T ss_dssp HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCC
Confidence 87765 67777654
No 88
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=100.00 E-value=1.2e-44 Score=365.54 Aligned_cols=294 Identities=17% Similarity=0.188 Sum_probs=231.2
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +++++|+|+|++| +|||+++... .+.|.++++.++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G-~G~GE~~~~~-------------~~~~~~e~~~~~~~~ 66 (368)
T 1sjd_A 1 MKLSGVELRRVQMPLVAPFRTSFGTQSVRELLLLRAVTPAG-EGWGECVTMA-------------GPLYSSEYNDGAEHV 66 (368)
T ss_dssp CCCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSC-EEEEECCCBS-------------SSSSSSCBHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEeeeeEEecccEEEEEEEeCCC-EEEEEecCCC-------------CCccccCcHHHHHHH
Confidence 699999987663 2333 3579999999999 9999764321 123778888888888
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+++.++|.|+|+|+.+++++|+.|. .+.+ +.+|++|||+||||+.||.+|+|||+||| |. +..
T Consensus 67 i~~~l~~~l~g~d~~~~~~l~~~~~-~~~g------------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~~~ 129 (368)
T 1sjd_A 67 LRHYLIPALLAAEDITAAKVTPLLA-KFKG------------HRMAKGALEMAVLDAELRAHERSFAAELG---SV-RDS 129 (368)
T ss_dssp HHHTHHHHHHHSSSCCHHHHHHHHT-TSCS------------CHHHHHHHHHHHHHHHHHHTTCBHHHHHT---CC-CSE
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHH-HhcC------------CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCC
Confidence 9888999999999999999998775 3321 24799999999999999999999999999 86 456
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|++ |++ |.+. +. ++.++++.+...+||+.+| .|+| + +.+.+.+
T Consensus 130 ~~~~-~~~---g~~~----~~---------~~~~~~a~~~~~~Gf~~vK----ik~~-------------~--~~~~e~v 173 (368)
T 1sjd_A 130 VPCG-VSV---GIMD----TI---------PQLLDVVGGYLDEGYVRIK----LKIE-------------P--GWDVEPV 173 (368)
T ss_dssp EEBE-EEE---CCCS----CH---------HHHHHHHHHHHHHTCSEEE----EECB-------------T--TBSHHHH
T ss_pred ccce-EEe---eCCC----CH---------HHHHHHHHHHHHhCccEEE----EecC-------------c--hhHHHHH
Confidence 7765 332 2210 11 2234556555556666543 3322 1 2346777
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCH
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~ 309 (445)
+.+|+++ | +++.|++|+ |++||.++ ++++ +.++++++.|||||++++|+
T Consensus 174 ~avr~~~---g--~~~~l~vDa------------------------n~~~~~~~-~~~~-~~l~~~~i~~iE~P~~~~~~ 222 (368)
T 1sjd_A 174 RAVRERF---G--DDVLLQVDA------------------------NTAYTLGD-APQL-ARLDPFGLLLIEQPLEEEDV 222 (368)
T ss_dssp HHHHHHH---C--TTSEEEEEC------------------------TTCCCGGG-HHHH-HTTGGGCCSEEECCSCTTCH
T ss_pred HHHHHhc---C--CCceEEEec------------------------cCCCCHHH-HHHH-HHHHhcCCCeEeCCCChhhH
Confidence 7777766 5 579999999 45678889 8875 56899999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhH
Q 013317 310 EHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+ ++++++++++++.+++|++++|++++||||++++++++|+++|+++|++|+ .|+.++
T Consensus 223 ~~~~~l~~~~~--ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~ 298 (368)
T 1sjd_A 223 LGHAELARRIQ--TPICLDES-IVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGM-IETGLG 298 (368)
T ss_dssp HHHHHHHTTCS--SCEEESTT-CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCC-CCCHHH
T ss_pred HHHHHHHHhCC--CCEEECCC-cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeCCc-cccHHH
Confidence 99999999988 99999998 478999999999999999999999999999999999999999999999996 688877
Q ss_pred HHHHHHhh
Q 013317 390 FIADLSVG 397 (445)
Q Consensus 390 ~~~~la~a 397 (445)
..+.++++
T Consensus 299 ~aa~~hla 306 (368)
T 1sjd_A 299 RAANVALA 306 (368)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 64444444
No 89
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=100.00 E-value=6.9e-45 Score=368.78 Aligned_cols=297 Identities=15% Similarity=0.204 Sum_probs=227.9
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +++++|+|+|++|++|||.++ +. ...+...
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~-g~---------------------~~~~~~~ 61 (382)
T 2gdq_A 4 VKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGIDGWGECV-DW---------------------LPALHVG 61 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEEC-SC---------------------HHHHHHH
T ss_pred CEEEEEEEEEEecccCcccccccceeccCcEEEEEEEECCCCEEEEeec-Cc---------------------hHHHHHH
Confidence 799999998773 2333 357999999999999999765 21 1234556
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
|++.++|.|+|+||.+++.+|+.|. .. ..+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 62 i~~~l~~~l~G~d~~~~~~~~~~l~-~~--------------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~ 123 (382)
T 2gdq_A 62 FTKRIIPFLLGKQAGSRLSLVRTIQ-KW--------------HQRAASAVSMALTEIAAKAADCSVCELWG---GRYREE 123 (382)
T ss_dssp HHHTHHHHHTTSBTTCHHHHHHHHH-HH--------------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCSCSE
T ss_pred HHHHHHHHhcCCCcccHHHHHHHHH-HH--------------HhHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCc
Confidence 7777999999999999999999997 32 14799999999999999999999999999 976666
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|+ |+++ |+.+. ...++ +..++++.+...+||+.+| .|.|. .+.+.+.+.+
T Consensus 124 vp~--~~~~-g~~~~-~~~~~---------e~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~~~d~e~v 174 (382)
T 2gdq_A 124 IPV--YASF-QSYSD-SPQWI---------SRSVSNVEAQLKKGFEQIK----VKIGG------------TSFKEDVRHI 174 (382)
T ss_dssp EEE--EEEC-CCBCS-STTHH---------HHHHHHHHHHHTTTCCEEE----EECSS------------SCHHHHHHHH
T ss_pred eeE--EEEe-cccCC-CcccH---------HHHHHHHHHHHHcCCCEEE----EcCCC------------CCHHHHHHHH
Confidence 666 5443 22111 10001 1223455555555665443 34331 1223345555
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcC-CeeEEECCCCccC
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH-PIVSIEDPFDQDD 308 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~-~i~~iEdP~~~~D 308 (445)
++||+++ | +++.|++|+ |++||.+++++++ +.++++ ++.|||||++++|
T Consensus 175 ~avR~a~---G--~d~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~~i~~iEqP~~~~d 224 (382)
T 2gdq_A 175 NALQHTA---G--SSITMILDA------------------------NQSYDAAAAFKWE-RYFSEWTNIGWLEEPLPFDQ 224 (382)
T ss_dssp HHHHHHH---C--TTSEEEEEC------------------------TTCCCHHHHHTTH-HHHTTCSCEEEEECCSCSSC
T ss_pred HHHHHhh---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHhhccCCeEEECCCCccc
Confidence 5555555 5 579999999 4668899999985 458999 9999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|++++++ +.|+.+
T Consensus 225 ~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~--~~es~i 299 (382)
T 2gdq_A 225 PQDYAMLRSRLS--VPVAGGENM-KGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASAH--AYDGSL 299 (382)
T ss_dssp HHHHHHHHTTCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCEECCC--CSSCSH
T ss_pred HHHHHHHHhhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec--CCCcHH
Confidence 999999999988 999999985 669999999999999999999999999999999999999999998654 579988
Q ss_pred HHHHHHHhhhcCCc
Q 013317 389 TFIADLSVGLATGQ 402 (445)
Q Consensus 389 ~~~~~la~a~~~~~ 402 (445)
+.+++++++...+.
T Consensus 300 ~~~a~l~laa~~~~ 313 (382)
T 2gdq_A 300 SRLYALFAQACLPP 313 (382)
T ss_dssp HHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHhCch
Confidence 87777766654443
No 90
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=100.00 E-value=4.5e-45 Score=369.46 Aligned_cols=294 Identities=18% Similarity=0.162 Sum_probs=227.1
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||||++|+++.+. .+.+ +++++|+|+|| |++|||.++... .+.|.++++.++..
T Consensus 7 ~mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td-G~~G~GE~~~~~-------------~~~~~~e~~~~~~~ 72 (375)
T 1r0m_A 7 MFKIEAAEIVVARLPLKFRFETSFGVQTHKVVPLLILHGE-GVQGVAEGTMEA-------------RPMYREETIAGALD 72 (375)
T ss_dssp CEECCEEEEEEEEEEBC----------CEEEEEEEEEEET-TEEEEEECCCBS-------------SSSSSSCBHHHHHH
T ss_pred ccEEEEEEEEEEeeecCCCeEecceEEeeccEEEEEEEEC-CeEEEEEEecCC-------------CCcccCCCHHHHHH
Confidence 5899999998773 1222 35799999995 999999765321 12367888888888
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
.+++.++|.|+|+|+.+++++++.|. .+. + +.+|++|||+||||+.||.+|+|||+||| |.. .
T Consensus 73 ~i~~~l~~~l~g~d~~~~~~l~~~~~-~~~----------g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~-~ 135 (375)
T 1r0m_A 73 LLRGTFLPAILGQTFANPEAVSDALG-SYR----------G--NRMARAMVEMAAWDLWARTLGVPLGTLLG---GHK-E 135 (375)
T ss_dssp HHHHTHHHHHTTCEESSHHHHHHTTT-TSC----------S--CHHHHHHHHHHHHHHHHHHHTCBHHHHHT---CCC-S
T ss_pred HHHHHHHHHHcCCCcCCHHHHHHHHH-Hcc----------C--chHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-C
Confidence 89888999999999999999887664 322 1 24799999999999999999999999999 863 4
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
.+|++ |++ |.+. +. ++.++++.+...+||+.+| .|+| + +.+.+.
T Consensus 136 ~~~~~-~~~---g~~~----~~---------~~~~~~a~~~~~~G~~~iK----ik~~-------------~--~~d~~~ 179 (375)
T 1r0m_A 136 QVEVG-VSL---GIQA----DE---------QATVDLVRRHVEQGYRRIK----LKIK-------------P--GWDVQP 179 (375)
T ss_dssp EEEBC-EEE---CCCS----SH---------HHHHHHHHHHHHTTCSCEE----EECB-------------T--TBSHHH
T ss_pred ceeee-EEe---cCCC----CH---------HHHHHHHHHHHHhcccEEE----EecC-------------h--HHHHHH
Confidence 56665 332 2110 11 2234555555555665543 2321 1 224566
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
+++||+++ +++.|++|+ |++||.++ ++++ +.+++|++.|||||++++|
T Consensus 180 v~avr~a~------~~~~l~vDa------------------------n~~~~~~~-~~~~-~~l~~~~i~~iEqP~~~~d 227 (375)
T 1r0m_A 180 VRATREAF------PDIRLTVDA------------------------NSAYTLAD-AGRL-RQLDEYDLTYIEQPLAWDD 227 (375)
T ss_dssp HHHHHHHC------TTSCEEEEC------------------------TTCCCGGG-HHHH-HTTGGGCCSCEECCSCTTC
T ss_pred HHHHHHHc------CCCeEEEeC------------------------CCCCCHHH-HHHH-HHHHhCCCcEEECCCCccc
Confidence 66665543 578999999 45678889 8875 4589999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. +++++++++++.+++|+++||++++||||++++++++|+++|+++|++|+ .|+.+
T Consensus 228 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i 303 (375)
T 1r0m_A 228 LVDHAELARRIR--TPLCLDESV-ASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGM-LESGI 303 (375)
T ss_dssp SHHHHHHHHHCS--SCEEESTTC-CSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCC-CCCHH
T ss_pred HHHHHHHHHhCC--CCEEecCcc-CCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecCc-cccHH
Confidence 999999999998 999999984 78999999999999999999999999999999999999999999999996 58887
Q ss_pred HHHHHHHhh
Q 013317 389 TFIADLSVG 397 (445)
Q Consensus 389 ~~~~~la~a 397 (445)
+..+.++++
T Consensus 304 ~~aa~~hla 312 (375)
T 1r0m_A 304 GRAHNIHLS 312 (375)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 765555554
No 91
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.1e-44 Score=367.49 Aligned_cols=306 Identities=16% Similarity=0.214 Sum_probs=229.3
Q ss_pred cceeEEEEEEEe-----------cC-CC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHH
Q 013317 2 VTINAVKARQIF-----------DS-RG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLK 65 (445)
Q Consensus 2 ~~I~~v~~~~i~-----------~~-~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~ 65 (445)
|||++|+++.+. .+ .+ +++++|+|+|++|++|||+++. + +.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~-------~--------------~~-- 57 (382)
T 1rvk_A 1 MIITDVEVRVFRTTTRRHSDSAGHAHPGPAHQVEQAMLTVRTEDGQEGHSFTAP-------E--------------IV-- 57 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEETTSCEEEEEECG-------G--------------GG--
T ss_pred CeEeEEEEEEEecCCCCcccccccccccccccceEEEEEEEECCCCEEEEEecC-------c--------------hH--
Confidence 699999998762 12 12 2469999999999999997651 1 01
Q ss_pred HHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q 013317 66 AVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGN 145 (445)
Q Consensus 66 a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~ 145 (445)
+...|++.++|.|+|+||.+++.+|+.|.+... + .| +++..+|++|||+||||+.||.+|+|||+||| |.
T Consensus 58 ~~~~i~~~l~~~l~g~d~~~~~~~~~~l~~~~~---~---~g-~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~ 127 (382)
T 1rvk_A 58 RPHVIEKFVKKVLIGEDHRDRERLWQDLAHWQR---G---SA-AQLTDRTLAVVDCALWDLAGRSLGQPVYKLIG---GY 127 (382)
T ss_dssp CHHHHHHTHHHHHTTSBTTCHHHHHHHHHHHHT---T---TT-TCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHC---CS
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHhhh---c---cc-chHHHHHHHHHHHHHHHHhHhHhCCCHHHHhC---CC
Confidence 244577789999999999999999999962221 1 11 34456899999999999999999999999999 87
Q ss_pred CcceeeeeeEEeec-CCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccC
Q 013317 146 KTLVLPVPAFNVIN-GGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQE 224 (445)
Q Consensus 146 ~~~~ip~p~~~~~~-gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~ 224 (445)
++++|+ |+.+. |+.|... . ...++..+++.+...+||+.+| .|.|... +++.++.+.
T Consensus 128 -~~~vp~--~~~~~~g~~~~~~-~--------~~~e~~~~~a~~~~~~Gf~~iK----ik~g~~~------~~~~~~~~~ 185 (382)
T 1rvk_A 128 -RDKVLA--YGSIMCGDELEGG-L--------ATPEDYGRFAETLVKRGYKGIK----LHTWMPP------VSWAPDVKM 185 (382)
T ss_dssp -CSEEEE--EEEECCCCCCTTT-T--------SSHHHHHHHHHHHHHHTCSEEE----EECCCTT------STTCCCHHH
T ss_pred -CCccee--cEEeccCcccccc-C--------CCHHHHHHHHHHHHHCCCCEEE----EcCCcCc------cccccchHH
Confidence 666666 54333 3333211 0 1112334566666666776553 4554211 112223333
Q ss_pred chHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCC
Q 013317 225 SYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPF 304 (445)
Q Consensus 225 ~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~ 304 (445)
+.+.+++||+++ | +++.|++|+ |++||.+++++++ +.++++++.|||||+
T Consensus 186 ~~e~v~avr~a~---g--~d~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i~~iE~P~ 235 (382)
T 1rvk_A 186 DLKACAAVREAV---G--PDIRLMIDA------------------------FHWYSRTDALALG-RGLEKLGFDWIEEPM 235 (382)
T ss_dssp HHHHHHHHHHHH---C--TTSEEEEEC------------------------CTTCCHHHHHHHH-HHHHTTTCSEEECCS
T ss_pred HHHHHHHHHHHh---C--CCCeEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCCEEeCCC
Confidence 445555555544 5 579999999 4668899999985 568999999999999
Q ss_pred CccCHHHHHHHHHHhCCceEEEeccccccC-HHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCC
Q 013317 305 DQDDWEHYAELTGKIGRHVQIVGDDLLVTN-PKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRS 383 (445)
Q Consensus 305 ~~~D~~~~~~L~~~~~~~~pI~gde~~~~~-~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~ 383 (445)
+++|++++++|+++++ +||++||+. .+ +++++++++.+++|++++|++++||||++++++++|+++|++++++ +
T Consensus 236 ~~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~--~ 310 (382)
T 1rvk_A 236 DEQSLSSYKWLSDNLD--IPVVGPESA-AGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH--G 310 (382)
T ss_dssp CTTCHHHHHHHHHHCS--SCEEECSSC-SSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC--C
T ss_pred ChhhHHHHHHHHhhCC--CCEEEeCCc-cCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec--C
Confidence 9999999999999998 999999985 66 9999999999999999999999999999999999999999998765 4
Q ss_pred CCChhHHHHHHHhhhcC
Q 013317 384 GETEDTFIADLSVGLAT 400 (445)
Q Consensus 384 ~et~~~~~~~la~a~~~ 400 (445)
.|+. ++||++++..
T Consensus 311 ~~~~---~~~laaa~~~ 324 (382)
T 1rvk_A 311 NTAM---NLHVVAATKN 324 (382)
T ss_dssp CSHH---HHHHHHHCSS
T ss_pred CCCH---HHHHHHhCCc
Confidence 5665 7899888753
No 92
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=100.00 E-value=7.4e-45 Score=373.41 Aligned_cols=312 Identities=13% Similarity=0.107 Sum_probs=222.3
Q ss_pred cceeEEEEEEEec-------CCC--C---CeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIFD-------SRG--N---PTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~~-------~~g--~---~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+.- +.| . ..++|+|+||+ ++|+|+++. + ......
T Consensus 27 mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~-~~G~GE~~g--------------------~---~~~~~~ 82 (445)
T 3va8_A 27 SIIKEIVITPVAFHDMPLLNSVGVHEPFALRSIIEIITED-SYGLGESYG--------------------D---SAHLDR 82 (445)
T ss_dssp TBCCEEEEEEEEEECCCBEETTEECCSEEEEEEEEEECSS-CEEEEEEEC--------------------C---HHHHHH
T ss_pred CEEEEEEEEEEecCCcccccccCcccCceeEEEEEEEECC-CEEEEecCC--------------------c---HHHHHH
Confidence 6999999998842 222 1 24899999999 999987642 1 122334
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCcc-cccccc------ccchhHHHHHHHHHHHHHHhcCCchHHHHHhh
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEW-GWCKQK------LGANAILAVSLAVCKAGAMVKKIPLYQHIANL 142 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~-~~~~~~------~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~ 142 (445)
| +.++|.|+|+||.+++++|+.|++.+.+.. .+ +.|+.+ +...|++|||+||||+.||.+|+|||+|||
T Consensus 83 i-~~l~p~LiG~d~~~ie~i~~~l~~~~~~~~-~~~~~G~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG-- 158 (445)
T 3va8_A 83 L-QKAADKIKGLSVYSTNVIYQRCVESLRNDT-NTGGDGMGGMVVTASVADKVFSPFEVACLDLQGKLAGISVSDLLG-- 158 (445)
T ss_dssp H-HHHHHHHTTSBTTCHHHHHHHHHHHTTTCC-C--CCSSTTSSCCSCHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT--
T ss_pred H-HHHHHHHCCCChhHHHHHHHHHHHhhhccc-ccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 5 469999999999999999999995432211 00 012222 445799999999999999999999999999
Q ss_pred hCCCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCC
Q 013317 143 AGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPN 221 (445)
Q Consensus 143 ~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~ 221 (445)
|+.++++|++.+....-..+ ++. .......+..+++.++++.+...+ ||+++ |.|+|. .+
T Consensus 159 -G~~r~~v~~~a~~~y~~~~~-~g~-~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~----KlKvG~------------~~ 219 (445)
T 3va8_A 159 -GRVRDSVQYSAYLFYKWGGH-PGD-EDDEYGPALDPEGVVKQAKKIIDEYGFKAI----KLKGGV------------FP 219 (445)
T ss_dssp -CCSSSEEEBCEEEECBCSSS-TTS-CCCTTCCBCSHHHHHHHHHHHHHHHCCSCE----EEECSS------------SC
T ss_pred -CCCCCeEEEeeeeccccccc-ccc-cccccccCCCHHHHHHHHHHHHHhcCCCEE----EEccCC------------CC
Confidence 98888898855432110000 000 000000001123345555555543 67655 345442 11
Q ss_pred ccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEE
Q 013317 222 IQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIE 301 (445)
Q Consensus 222 ~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iE 301 (445)
.+.+.+++++||+++ +++.|+||+ |+.||.++++++. +.++++ +.|||
T Consensus 220 ~~~Di~~v~avRea~------~~~~L~vDa------------------------N~~w~~~~Ai~~~-~~L~~~-l~~iE 267 (445)
T 3va8_A 220 PADEVAAIKALHKAF------PGVPLRLDP------------------------NAAWTVETSKWVA-KELEGI-VEYLE 267 (445)
T ss_dssp HHHHHHHHHHHHHHS------TTCCEEEEC------------------------TTCBCHHHHHHHH-HHTTTT-CSEEE
T ss_pred HHHHHHHHHHHHHhC------CCCcEeeeC------------------------CCCCCHHHHHHHH-HHHhhh-cCeEe
Confidence 222344454444443 578999999 5778999999975 557999 99999
Q ss_pred CCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecC
Q 013317 302 DPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASH 381 (445)
Q Consensus 302 dP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~ 381 (445)
||++ |++++++|+++++ +||++||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++ +|
T Consensus 268 eP~~--d~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~i~~~a~div~~d~~~~GGitea~kia~lA~~~gv~v~-~h 341 (445)
T 3va8_A 268 DPAG--EIEGMAAVAKEAS--MPLATNMA-VVAFDHLPPSILQDAVQVILSDHHFWGGLRKSQTLASICATWGLRLS-MH 341 (445)
T ss_dssp SCBS--HHHHHHHHHTTCS--SCEEESSS-CCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEE-EC
T ss_pred ecCc--CHHHHHHHHHcCC--CCEEeCCc-cCCHHHHHHHHHcCCCCEEEecchhcCCHHHHHHHHHHHHHcCCEEE-Ee
Confidence 9985 8999999999998 99999998 57799999999999999999999999999999999999999999976 55
Q ss_pred CCCCChhHHH--HHHHhhh
Q 013317 382 RSGETEDTFI--ADLSVGL 398 (445)
Q Consensus 382 ~~~et~~~~~--~~la~a~ 398 (445)
.+.|+.++.+ +||+.++
T Consensus 342 ~~~e~~I~~aa~~hlaaa~ 360 (445)
T 3va8_A 342 SNSHLGISLAAMTHLASAT 360 (445)
T ss_dssp CCSCCHHHHHHHHHHHHTC
T ss_pred CCcccHHHHHHHHHHHHhC
Confidence 5678877654 4665543
No 93
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-44 Score=365.65 Aligned_cols=293 Identities=19% Similarity=0.200 Sum_probs=228.0
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +++++|+|+|| |++|||+++... .+.|.++++.++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td-G~~G~GE~~~~~-------------~~~~~~e~~~~~~~~ 66 (369)
T 2zc8_A 1 MRIEAAELRILELPLKFRFETSFGVQTKRTILLLRLFGE-GLEGLGEGVMER-------------LPLYREETVAGARYL 66 (369)
T ss_dssp CBCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEET-TEEEEEECCCBS-------------SCSSSSCBHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCEEEeeEEEeeCcEEEEEEEEC-CeEEEEEeccCC-------------CCcccCCCHHHHHHH
Confidence 699999987663 2333 35799999995 999999765321 123677888888888
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+++.++|.|+|+|+.+++++|+.|. .+.+ +.+|++|||+||||+.||.+|+|||+||| |.. ..
T Consensus 67 i~~~l~~~l~G~d~~~~~~l~~~~~-~~~g------------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~-~~ 129 (369)
T 2zc8_A 67 LEEVFLPRVLGRDLPNPEALREALA-PFRG------------NPMAKAVLEMAFFDLWAKALGRPLWQVLG---GVR-QA 129 (369)
T ss_dssp HHHTHHHHHTTCBCSSHHHHHHHHT-TSCS------------CHHHHHHHHHHHHHHHHHHTTSBHHHHHT---CCC-SE
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHH-HhcC------------ChHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cc
Confidence 9888999999999999999998775 3321 24799999999999999999999999999 863 45
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|++ |++ |.+. +. ++.++++.+...+||+.+| .|+| + +.+.+.+
T Consensus 130 ~~~~-~~~---g~~~----~~---------~~~~~~a~~~~~~G~~~iK----ik~~-------------~--~~d~~~v 173 (369)
T 2zc8_A 130 VEVG-VSL---GIQP----SV---------EDTLRVVERHLEEGYRRIK----LKIK-------------P--GWDYEVL 173 (369)
T ss_dssp EEBC-EEE---CCCS----SH---------HHHHHHHHHHHHTTCSCEE----EECB-------------T--TBSHHHH
T ss_pred eece-EEe---cCCC----CH---------HHHHHHHHHHHHhhhheee----eecC-------------h--hHHHHHH
Confidence 6664 332 2110 11 2234555555555665543 2321 1 2245666
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCH
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~ 309 (445)
++||+++ +++.|++|+ |++||.++ ++++ +.+++|++.|||||++++|+
T Consensus 174 ~avr~a~------~~~~l~vDa------------------------n~~~~~~~-~~~~-~~l~~~~i~~iEqP~~~~d~ 221 (369)
T 2zc8_A 174 KAVREAF------PEATLTADA------------------------NSAYSLAN-LAQL-KRLDELRLDYIEQPLAYDDL 221 (369)
T ss_dssp HHHHHHC------TTSCEEEEC------------------------TTCCCGGG-HHHH-HGGGGGCCSCEECCSCTTCS
T ss_pred HHHHHHc------CCCeEEEec------------------------CCCCCHHH-HHHH-HHHHhCCCcEEECCCCcccH
Confidence 6665553 578899999 45678889 8875 56899999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhH
Q 013317 310 EHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+ ++++++++++++.+++|+++||++++||||++++++++|+++|+++|++|+ .|+.++
T Consensus 222 ~~~~~l~~~~~--ipIa~dE~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~ 297 (369)
T 2zc8_A 222 LDHAKLQRELS--TPICLDES-LTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGM-LEAGVG 297 (369)
T ss_dssp HHHHHHHHHCS--SCEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCC-CCCHHH
T ss_pred HHHHHHHhhCC--CCEEEcCc-cCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCc-cccHHH
Confidence 99999999988 99999998 478999999999999999999999999999999999999999999999996 588877
Q ss_pred HHHHHHhh
Q 013317 390 FIADLSVG 397 (445)
Q Consensus 390 ~~~~la~a 397 (445)
..+.++++
T Consensus 298 ~aa~~hla 305 (369)
T 2zc8_A 298 RAHNLHLA 305 (369)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 65555554
No 94
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=100.00 E-value=3e-44 Score=363.82 Aligned_cols=295 Identities=16% Similarity=0.205 Sum_probs=226.0
Q ss_pred cceeEEEEEEEe--------cCCCC------CeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHH
Q 013317 2 VTINAVKARQIF--------DSRGN------PTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAV 67 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g~------~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~ 67 (445)
|||++|+++.+. .+.+. ++++|+|+|++|++|||++... ++.|.+++..++.
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~--------------~~~~~~~~~~~~~ 68 (378)
T 2qdd_A 3 LRITRLTVFHLDLPLAKPYWLSGGRLKFDRLDSTYLRIDTDEGVTGWGEGCPW--------------GHSYLPAHGPGLR 68 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCC--CEEEEEEEEEEEEEETTSCEEEEEECCS--------------TTTSSSCCHHHHH
T ss_pred CEEEEEEEEEEeccccCceecccCcccccccceEEEEEEECCCCEEEEEEecC--------------CCCcCCCCHHHHH
Confidence 799999998662 34443 4699999999999999954321 0136677788888
Q ss_pred HHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 68 QNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
..|+ .++|.|+|+||.+++++|+.|. ... .+ ..+|++|||+||||+.||.+|+|||+||| |..+
T Consensus 69 ~~l~-~l~~~l~g~d~~~~~~~~~~l~-~~~---------~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~ 132 (378)
T 2qdd_A 69 AGIA-TLAPHLLGLDPRSLDHVNRVMD-LQL---------PG--HSYVKSPIDMACWDILGQVAGLPLWQLLG---GEAA 132 (378)
T ss_dssp HHHH-HHHHHHTTCCTTCHHHHHHHHH-HHS---------CS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CSSC
T ss_pred HHHH-HHHHHHCCCCccCHHHHHHHHH-Hhh---------cc--chHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCC
Confidence 8888 8999999999999999999986 321 11 35899999999999999999999999999 9766
Q ss_pred ceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE 227 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 227 (445)
+++|+ |.+++.+ +. +...+++.+...+||+.+| .|+|. ++ ...
T Consensus 133 ~~v~~--~~~~~~~-------~~---------e~~~~~a~~~~~~Gf~~iK----ik~g~------------~~---~~~ 175 (378)
T 2qdd_A 133 TPVPI--NSSISTG-------TP---------DQMLGLIAEAAAQGYRTHS----AKIGG------------SD---PAQ 175 (378)
T ss_dssp CCEEB--EEEECSC-------CH---------HHHHHHHHHHHHHTCCEEE----EECCS------------SC---HHH
T ss_pred CCCce--EEEecCC-------CH---------HHHHHHHHHHHHHhhhhee----ecCCC------------CC---hHH
Confidence 67775 5443211 11 1234555555556665543 44431 11 233
Q ss_pred HHHHHHHHHHh-cCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCc
Q 013317 228 GFELLKTAIAK-GGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQ 306 (445)
Q Consensus 228 ~l~~v~~ai~~-~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~ 306 (445)
.++.+ +++|+ +| +++.|++|+ |++||.+++++++. .++ +++ |||||++
T Consensus 176 ~~e~v-~avr~a~g--~~~~l~vDa------------------------n~~~~~~~a~~~~~-~l~-~~i-~iEqP~~- 224 (378)
T 2qdd_A 176 DIARI-EAISAGLP--DGHRVTFDV------------------------NRAWTPAIAVEVLN-SVR-ARD-WIEQPCQ- 224 (378)
T ss_dssp HHHHH-HHHHHSCC--TTCEEEEEC------------------------TTCCCHHHHHHHHT-SCC-CCC-EEECCSS-
T ss_pred HHHHH-HHHHHHhC--CCCEEEEeC------------------------CCCCCHHHHHHHHH-HhC-CCc-EEEcCCC-
Confidence 44444 33443 55 579999999 46688999999854 568 999 9999998
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||+|++++++++|+++|+++++++ +.|+
T Consensus 225 -d~~~~~~l~~~~~--iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~-~~es 299 (378)
T 2qdd_A 225 -TLDQCAHVARRVA--NPIMLDECL-HEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIED-VGGT 299 (378)
T ss_dssp -SHHHHHHHHTTCC--SCEEECTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SSCC
T ss_pred -CHHHHHHHHHhCC--CCEEECCCc-CCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecC-CCCc
Confidence 9999999999988 999999985 6799999999999999999999999999999999999999999998776 5788
Q ss_pred hhHHH--HHHHhhhc
Q 013317 387 EDTFI--ADLSVGLA 399 (445)
Q Consensus 387 ~~~~~--~~la~a~~ 399 (445)
.++.. +||+.+++
T Consensus 300 ~i~~aa~~hlaaa~~ 314 (378)
T 2qdd_A 300 ALADTAALHLAASTP 314 (378)
T ss_dssp HHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCC
Confidence 87655 45555443
No 95
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=100.00 E-value=2e-44 Score=366.15 Aligned_cols=281 Identities=12% Similarity=0.096 Sum_probs=212.9
Q ss_pred eEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhcc
Q 013317 20 TVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDG 99 (445)
Q Consensus 20 ~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~ 99 (445)
+++|+|+|++|++|||+++... ++ .+....|++.++|.|+|+||.+++.+|+.|. .+ +
T Consensus 52 ~~~V~v~td~G~~G~GE~~~~~------------------~~--~~~~~~i~~~l~~~l~G~d~~~~~~i~~~l~-~~-~ 109 (388)
T 2nql_A 52 SVLVRMTTEAGTVGWGETYGIV------------------AP--GAVAALINDLLAGFVIGRDASDPSAVYDDLY-DM-M 109 (388)
T ss_dssp EEEEEEEETTCCEEEEEEECSS------------------CH--HHHHHHHHHTHHHHHTTCCSSSHHHHHHHHH-HH-H
T ss_pred EEEEEEEECCCCEEEEEecCCC------------------Cc--HHHHHHHHHHHHHHhcCCCcccHHHHHHHHH-hh-c
Confidence 6899999999999999665421 11 1445567778999999999999999999996 21 1
Q ss_pred CCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCCccCCCcccccceeeccCC
Q 013317 100 TVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIG 179 (445)
Q Consensus 100 ~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~ 179 (445)
+.+ .++.++..+|++|||+||||+.||.+|+|||+||| |. ++++|+ |+++ |.+. +.
T Consensus 110 ~~~---~~~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~-~~~vp~--~~~~--g~~~----~~--------- 165 (388)
T 2nql_A 110 RVR---GYTGGFYVDALAALDIALWDIAGQEAGKSIRDLLG---GG-VDSFPA--YVSG--LPER----TL--------- 165 (388)
T ss_dssp GGG---TCSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CC-CSEEEE--EEEC--CCCS----SH---------
T ss_pred ccc---cCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCceEe--eEEe--CCCC----CH---------
Confidence 111 11234456899999999999999999999999999 87 666766 5443 2110 11
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccc
Q 013317 180 ASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDR 259 (445)
Q Consensus 180 ~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~ 259 (445)
++..+++.+...++|+.+| .|+|. .+.+. .+.++.||+++ | +++.|++|+
T Consensus 166 e~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~~~-~e~v~avr~a~---g--~d~~l~vDa-------- 215 (388)
T 2nql_A 166 KARGELAKYWQDRGFNAFK----FATPV------------ADDGP-AAEIANLRQVL---G--PQAKIAADM-------- 215 (388)
T ss_dssp HHHHHHHHHHHHTTCCEEE----EEGGG------------CTTCH-HHHHHHHHHHH---C--TTSEEEEEC--------
T ss_pred HHHHHHHHHHHHhCCCEEE----EeCCC------------CChHH-HHHHHHHHHHh---C--CCCEEEEEC--------
Confidence 1223455555555665543 34331 12233 45555555544 5 579999999
Q ss_pred cCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHH
Q 013317 260 KDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVE 339 (445)
Q Consensus 260 ~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~ 339 (445)
|++||.+++++++. .++++++.|||||++++|++++++|+++++ +||++||+. .++++++
T Consensus 216 ----------------n~~~~~~~a~~~~~-~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~--iPI~~dE~~-~~~~~~~ 275 (388)
T 2nql_A 216 ----------------HWNQTPERALELIA-EMQPFDPWFAEAPVWTEDIAGLEKVSKNTD--VPIAVGEEW-RTHWDMR 275 (388)
T ss_dssp ----------------CSCSCHHHHHHHHH-HHGGGCCSCEECCSCTTCHHHHHHHHTSCC--SCEEECTTC-CSHHHHH
T ss_pred ----------------CCCCCHHHHHHHHH-HHhhcCCCEEECCCChhhHHHHHHHHhhCC--CCEEEeCCc-CCHHHHH
Confidence 46688899999855 589999999999999999999999999988 999999985 6799999
Q ss_pred HHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhh
Q 013317 340 KAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGL 398 (445)
Q Consensus 340 ~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~ 398 (445)
++++.+++|++++|+++ ||+|++++++++|+++|+++++ |++.||.++..+.++++.
T Consensus 276 ~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~-h~~~es~i~~aa~~hlaa 332 (388)
T 2nql_A 276 ARIERCRIAIVQPEMGH-KGITNFIRIGALAAEHGIDVIP-HATVGAGIFLAASLQASS 332 (388)
T ss_dssp HHHTTSCCSEECCCHHH-HCHHHHHHHHHHHHHHTCEECC-CCCSSCSHHHHHHHHHHT
T ss_pred HHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHcCCeEEe-ecCCCcHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999876 546788877655444443
No 96
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=100.00 E-value=7.3e-44 Score=361.07 Aligned_cols=297 Identities=15% Similarity=0.134 Sum_probs=227.4
Q ss_pred cceeEEEEEEEec---------CCC-----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHH
Q 013317 2 VTINAVKARQIFD---------SRG-----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAV 67 (445)
Q Consensus 2 ~~I~~v~~~~i~~---------~~g-----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~ 67 (445)
|||++|+++.+.. +.+ +++++|+|+|++|++|||+++... +.|++++..++.
T Consensus 3 mkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~--------------~~~~~~~~~~~~ 68 (379)
T 2rdx_A 3 LRITRIRLYKTDLPYVDGSYGWGAGNAITVARASVVVIDTDAGLQGCGEFTPCG--------------ENYMIAHSEGVD 68 (379)
T ss_dssp CCEEEEEEEEEEEEBTTSCCEETTTEECSEEEEEEEEEEETTSCEEEEEEBCSS--------------TTSSSCCTTHHH
T ss_pred CEEEEEEEEEEeeecCCCCcEecCceeecccceEEEEEEECCCCEEEEEeecCC--------------CCcCCCCHHHHH
Confidence 7999999987731 222 246999999999999999654310 125566666667
Q ss_pred HHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 68 QNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
..|+ .++|.|+|+||.+++.+|+.|. ... .+ ..+|++|||+||||+.||.+|+|||+||| |..+
T Consensus 69 ~~i~-~l~~~l~g~d~~~~~~~~~~l~-~~~----------~g-~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~ 132 (379)
T 2rdx_A 69 AFAR-LAAPQLLGQDPRQVARMERLMD-HLV----------QG-HGYAKAPFDAAFWDILGQATGQPVWMLLG---GKLC 132 (379)
T ss_dssp HHHH-HHHHHHTTSCTTCHHHHHHHHH-HHS----------SS-CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---SCCC
T ss_pred HHHH-HHHHHHcCCChhhHHHHHHHHH-HHh----------cc-cHHHHHHHHHHHHHHhHHHhCCCHHHHcC---CCCC
Confidence 7787 7999999999999999999986 321 11 35899999999999999999999999999 9767
Q ss_pred ceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE 227 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 227 (445)
+++|+ |.++ |.. +. +...+++.+...+||+.+| .|.|. + ...
T Consensus 133 ~~v~~--~~~~--~~~-----~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~-------------~---~~~ 174 (379)
T 2rdx_A 133 DGAPM--YRVA--PQR-----SE---------AETRAELARHRAAGYRQFQ----IKVGA-------------D---WQS 174 (379)
T ss_dssp SSEEB--CEEC--CCS-----CS---------HHHHHHHHHHHHTTCCEEE----EECCS-------------C---HHH
T ss_pred CceeE--EEEe--cCC-----CH---------HHHHHHHHHHHHcCCCEEE----EeccC-------------C---HHH
Confidence 77776 4443 210 11 2234555555555665442 34331 1 233
Q ss_pred HHHHHHHHHHh-cCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCc
Q 013317 228 GFELLKTAIAK-GGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQ 306 (445)
Q Consensus 228 ~l~~v~~ai~~-~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~ 306 (445)
.++.+ +++|+ +| +++.|++|+ |++||.+++++++ +.++++++ |||||++
T Consensus 175 ~~e~v-~avr~a~g--~d~~l~vDa------------------------n~~~~~~~a~~~~-~~l~~~~i-~iE~P~~- 224 (379)
T 2rdx_A 175 DIDRI-RACLPLLE--PGEKAMADA------------------------NQGWRVDNAIRLA-RATRDLDY-ILEQPCR- 224 (379)
T ss_dssp HHHHH-HHHGGGSC--TTCEEEEEC------------------------TTCSCHHHHHHHH-HHTTTSCC-EEECCSS-
T ss_pred HHHHH-HHHHHhcC--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhCCe-EEeCCcC-
Confidence 45555 44554 55 579999999 4678899999975 55899999 9999998
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
|++++++|+++++ +||++||+ ++++++++++++.+++|++++|++++||+|++++++++|+++|+++++++ +.|+
T Consensus 225 -~~~~~~~l~~~~~--iPI~~de~-i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es 299 (379)
T 2rdx_A 225 -SYEECQQVRRVAD--QPMKLDEC-VTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED-SWGG 299 (379)
T ss_dssp -SHHHHHHHHTTCC--SCEEECTT-CCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC-SBCS
T ss_pred -CHHHHHHHHhhCC--CCEEEeCC-cCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee-ccCc
Confidence 9999999999988 99999998 47799999999999999999999999999999999999999999998776 5799
Q ss_pred hhHHHHHHHhhhcCC
Q 013317 387 EDTFIADLSVGLATG 401 (445)
Q Consensus 387 ~~~~~~~la~a~~~~ 401 (445)
.++.+++++++...+
T Consensus 300 ~i~~~a~~~laaa~~ 314 (379)
T 2rdx_A 300 EIASAAVAHFAASTP 314 (379)
T ss_dssp HHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCC
Confidence 887766665554333
No 97
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=100.00 E-value=2.1e-44 Score=366.61 Aligned_cols=300 Identities=18% Similarity=0.233 Sum_probs=223.6
Q ss_pred cceeEEEEEEEe--------cCCC----------CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccH
Q 013317 2 VTINAVKARQIF--------DSRG----------NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGV 63 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----------~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~ 63 (445)
|||++|+++.+. .+.+ +++++|+|+||+|++|||+++... +.+
T Consensus 13 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~----------------~~~--- 73 (393)
T 2og9_A 13 DRITWVRISSCYLPLATPISDAKVLTGRQKPMTEIAILFAEIETAGGHQGLGFSYSKR----------------AGG--- 73 (393)
T ss_dssp CCEEEEEEEEEEEECSSCCC------------CEEEEEEEEEEETTSCEEEEEEEEES----------------TTH---
T ss_pred CeEeEEEEEEEeccCCCccccccccccccCCcCCccEEEEEEEECCCCEEEEEecCcc----------------cch---
Confidence 899999998873 2222 357999999999999999775421 111
Q ss_pred HHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhh
Q 013317 64 LKAVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLA 143 (445)
Q Consensus 64 ~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~ 143 (445)
......++ .++|.|+|+||.+++.+|+.|. .... .++++++..+|++|||+||||+.||.+|+|||+|||
T Consensus 74 ~~~~~~i~-~l~~~l~G~d~~~~~~i~~~l~-~~~~-----~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~llG--- 143 (393)
T 2og9_A 74 PGQFAHAR-EIAPALIGEDPSDIAKLWDKLC-WAGA-----SAGRSGLSTQAIGAFDVALWDLKAKRAGLSLAKLLG--- 143 (393)
T ss_dssp HHHHHHHH-HHGGGGTTSCTTCHHHHHHHHH-HTTG-----GGCSSSHHHHHHHHHHHHHHHHHHHHTTCBHHHHHC---
T ss_pred HHHHHHHH-HHHHHHcCCChhhHHHHHHHHH-Hhhh-----hcCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---
Confidence 22223344 5999999999999999999998 4321 122344557899999999999999999999999999
Q ss_pred CCCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCcc
Q 013317 144 GNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQ 223 (445)
Q Consensus 144 G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~ 223 (445)
|. ++++| +|+++ |+.+. .+. ++..+++.+...+||+.+| .|+|. .+.+
T Consensus 144 g~-~~~vp--~y~~~-g~~~~---~~~---------e~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~~ 191 (393)
T 2og9_A 144 SY-RDSVR--CYNTS-GGFLH---TPI---------DQLMVNASASIERGIGGIK----LKVGQ------------PDGA 191 (393)
T ss_dssp CS-CSEEE--EEBCT-TCCTT---SCH---------HHHHHHHHHHHHTTCCCEE----EECCC------------SCHH
T ss_pred CC-CCceE--EEEEC-CCcCC---CCH---------HHHHHHHHHHHHcCCCEEE----EecCC------------CCHH
Confidence 86 45555 46543 22110 011 2234455555555665543 34331 1123
Q ss_pred CchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECC
Q 013317 224 ESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDP 303 (445)
Q Consensus 224 ~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP 303 (445)
.+.+.+++||+++ | +++.|++|+ |++||.+++++++. .++++++.|||||
T Consensus 192 ~~~e~v~avR~av---g--~d~~l~vDa------------------------n~~~~~~~a~~~~~-~l~~~~i~~iE~P 241 (393)
T 2og9_A 192 LDIARVTAVRKHL---G--DAVPLMVDA------------------------NQQWDRPTAQRMCR-IFEPFNLVWIEEP 241 (393)
T ss_dssp HHHHHHHHHHHHH---C--TTSCEEEEC------------------------TTCCCHHHHHHHHH-HHGGGCCSCEECC
T ss_pred HHHHHHHHHHHHc---C--CCCEEEEEC------------------------CCCCCHHHHHHHHH-HHHhhCCCEEECC
Confidence 3355555555554 5 579999999 46788999999864 5899999999999
Q ss_pred CCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCC
Q 013317 304 FDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRS 383 (445)
Q Consensus 304 ~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~ 383 (445)
++++|++++++|+++++ +||++||+. +++++++++++.+++|++++|++++||||++++++++|+++|++++ +|++
T Consensus 242 ~~~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~-~h~~ 317 (393)
T 2og9_A 242 LDAYDHEGHAALALQFD--TPIATGEML-TSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEHAGLMLA-PHFA 317 (393)
T ss_dssp SCTTCHHHHHHHHHHCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEEC-CCSC
T ss_pred CCcccHHHHHHHHHhCC--CCEEeCCCc-CCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHHcCCEEe-ccCc
Confidence 99999999999999998 999999984 6799999999999999999999999999999999999999999986 5544
Q ss_pred CCChhHHHHHHHhhhcC
Q 013317 384 GETEDTFIADLSVGLAT 400 (445)
Q Consensus 384 ~et~~~~~~~la~a~~~ 400 (445)
.+ ..+||++++..
T Consensus 318 ~~----~~~~laaa~~~ 330 (393)
T 2og9_A 318 ME----LHVHLAAAYPR 330 (393)
T ss_dssp HH----HHHHHHHTSSS
T ss_pred cH----HHHHHHhhCCC
Confidence 43 46888887653
No 98
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=100.00 E-value=9.2e-45 Score=371.25 Aligned_cols=275 Identities=18% Similarity=0.184 Sum_probs=208.1
Q ss_pred CeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhc
Q 013317 19 PTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLD 98 (445)
Q Consensus 19 ~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~ 98 (445)
.+|+|+|+||+|++|||++..+ ..++..+.+.++|.|+|+||.+++++|+.|++...
T Consensus 65 ~~vlV~V~tddGi~G~Ge~~~~-----------------------~~~~~~i~~~lap~LiG~dp~~ie~i~~~m~~~~~ 121 (455)
T 3fxg_A 65 GSFLVEIEATDGTVGFATGFGG-----------------------PPACWLVHQHFERFLIGADPRNTNLLFEQMYRASM 121 (455)
T ss_dssp CEEEEEEEETTSCEEEEEEECH-----------------------HHHHHHHHHTTHHHHTTCCTTCHHHHHHHHHHHTT
T ss_pred eEEEEEEEECCCCEEEEeCcCC-----------------------HHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHhhh
Confidence 3599999999999999865321 22345677889999999999999999999984321
Q ss_pred cCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCCccCCCcccccceeeccC
Q 013317 99 GTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPI 178 (445)
Q Consensus 99 ~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~ 178 (445)
.+|+.+...+|++||||||||+.||.+|+|||+||| |+.++++|+ |++ |+.
T Consensus 122 ------~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~rd~vp~--y~~--g~~---------------- 172 (455)
T 3fxg_A 122 ------FYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIG---GATKERLDF--YCT--GPE---------------- 172 (455)
T ss_dssp ------TTCSSSHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCSCSEEEE--EEE--SSC----------------
T ss_pred ------hccCCcchHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CccCCeeEE--eec--CCC----------------
Confidence 122334445799999999999999999999999999 987888887 432 210
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEecccccccc
Q 013317 179 GASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYD 258 (445)
Q Consensus 179 ~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~ 258 (445)
.+.+ ..++|+++ |+|+|... .+|. .+.+.+.++++++|+++ | +++.|+||+
T Consensus 173 ----~~~~---~~~Gf~~~----KlKv~~~~----~~G~--~~~~~di~rv~avRea~---G--~d~~L~vDa------- 223 (455)
T 3fxg_A 173 ----PTAA---KAMGFWGG----KVPLPFCP----DDGH--EGLRKNVEFLRKHREAV---G--PDFPIMVDC------- 223 (455)
T ss_dssp ----HHHH---HHHTCSCE----EEECCCCG----GGHH--HHHHHHHHHHHHHHHHH---C--SSSCEEEEC-------
T ss_pred ----HHHH---HHcCCCEE----EEcCCCCc----cccc--ccHHHHHHHHHHHHHHh---C--CCCeEEEeC-------
Confidence 0112 23456655 34443100 0000 01122344455555444 6 589999999
Q ss_pred ccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHH
Q 013317 259 RKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRV 338 (445)
Q Consensus 259 ~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~ 338 (445)
|+.||.+++++++ +.+++|++.|||||++++|+++|++|+++++ .+||++||+. .+++++
T Consensus 224 -----------------N~~wt~~~Ai~~~-~~Le~~~l~~iEEPl~~dd~~~la~L~~~~~-~iPIA~gEs~-~s~~d~ 283 (455)
T 3fxg_A 224 -----------------YMSLNVSYTIELV-KACLDLNINWWEECLSPDDTDGFALIKRAHP-TVKFTTGEHE-YSRYGF 283 (455)
T ss_dssp -----------------TTCCCHHHHHHHH-HHTGGGCCSEEECCSCGGGGGGHHHHHHHCT-TSEEEECTTC-CHHHHH
T ss_pred -----------------CCCCCHHHHHHHH-HhcccCCcceecCCCCcchHHHHHHHHHhCC-CCeEECCCcc-CCHHHH
Confidence 5778999999975 5679999999999999999999999999873 2899999985 569999
Q ss_pred HHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhc
Q 013317 339 EKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLA 399 (445)
Q Consensus 339 ~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~ 399 (445)
+++++.+++|++|+|++++||||++++++++|+++|++++ +|.++ .+.+||++++.
T Consensus 284 ~~li~~~avDiiq~d~~~~GGItea~kIa~lA~a~Gv~v~-~H~~~----~aslHlaaa~p 339 (455)
T 3fxg_A 284 RKLVEGRNLDIIQPDVMWLGGLTELLKVAALAAAYDVPVV-PHASG----PYSYHFQISQP 339 (455)
T ss_dssp HHHHTTCCCSEECCCTTTSSCHHHHHHHHHHHHTTTCCBC-CCSCT----HHHHHHHTTCT
T ss_pred HHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEE-ecchH----HHHHHHHHhCC
Confidence 9999999999999999999999999999999999999985 55332 35678877754
No 99
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.6e-44 Score=366.45 Aligned_cols=295 Identities=17% Similarity=0.201 Sum_probs=223.4
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCc-cHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGR-GVLKAV 67 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~-~~~~a~ 67 (445)
||||++|+++.+. .+.+ +++++|+|+|++|++|||+++. ++ +. +.
T Consensus 3 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~Ge~~~--------------------~~~~~--~~ 60 (384)
T 2pgw_A 3 LVKISNVRVRPLVLPLKQPYHWSYGIRESFAVNLIEIEADDGTVGIGECTV--------------------APDQT--GT 60 (384)
T ss_dssp -CCEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEEEC--------------------TTCHH--HH
T ss_pred CCEEEEEEEEEEecccCccceeccceeeeceEEEEEEEECCCCEEEEccCC--------------------CchHH--HH
Confidence 6899999998762 3333 3579999999999999997652 11 12 45
Q ss_pred HHHHHhHhhhccCCCCCCHHHHHHH-HHHhhccCCCcccccc---ccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhh
Q 013317 68 QNVNSIIGPALVGKDPTEQTQIDNF-MVQQLDGTVNEWGWCK---QKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLA 143 (445)
Q Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~-l~~~l~~~~~~~~~~~---~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~ 143 (445)
..|++.++|.|+|+||.+++.+|+. |++... + .|+ .. ..+|++|||+||||+.||.+|+|||+|||
T Consensus 61 ~~i~~~l~~~l~g~d~~~~~~~~~~~l~~~~~---~---~g~~~~~~-~~~a~~aid~AlwDl~~k~~g~Pl~~llG--- 130 (384)
T 2pgw_A 61 AAILYRLAKHLVGHSPHDVAPLIARIFHQEYL---G---HGANIMRA-ANQIFSGIDMAMWDLQGKLAGLPVHQLLG--- 130 (384)
T ss_dssp HHHHHHHHGGGTTSCGGGHHHHHHHHHHHHTG---G---GTCCCHHH-HHHHHHHHHHHHHHHHHHHHTSBGGGTTT---
T ss_pred HHHHHHHHHHHCCCChhHHHHHHHHHHHHHhh---h---cccccccc-cHHHHHHHHHHHHHHHHhHcCCCHHHHcC---
Confidence 5677789999999999999999998 852321 1 111 11 46899999999999999999999999999
Q ss_pred CCCcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCcc
Q 013317 144 GNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQ 223 (445)
Q Consensus 144 G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~ 223 (445)
|..++++|+ |.+++++ +.+ +..+++.+...+||+.+ |.|+| + +
T Consensus 131 g~~~~~v~~--~~~~~~~-------~~e---------~~~~~a~~~~~~Gf~~i----Kik~g----------~---~-- 173 (384)
T 2pgw_A 131 GAHRKAVGY--FYFLQGE-------TAE---------ELARDAAVGHAQGERVF----YLKVG----------R---G-- 173 (384)
T ss_dssp CCSSSEEEB--CEECCCS-------SHH---------HHHHHHHHHHHTTCCEE----EEECC----------S---C--
T ss_pred CCCCCceEE--EEECCCC-------CHH---------HHHHHHHHHHHcCCCEE----EECcC----------C---C--
Confidence 976666666 4443221 111 22345555544555544 23433 1 1
Q ss_pred CchHHHHHHHHHHHh-cCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEEC
Q 013317 224 ESYEGFELLKTAIAK-GGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIED 302 (445)
Q Consensus 224 ~~~~~l~~v~~ai~~-~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEd 302 (445)
....++.+ +++|+ +| ++.|++|+ |++||.+++++++ +.++++++.||||
T Consensus 174 -~~~~~e~v-~avr~a~g---d~~l~vD~------------------------n~~~~~~~a~~~~-~~l~~~~i~~iEq 223 (384)
T 2pgw_A 174 -EKLDLEIT-AAVRGEIG---DARLRLDA------------------------NEGWSVHDAINMC-RKLEKYDIEFIEQ 223 (384)
T ss_dssp -HHHHHHHH-HHHHTTST---TCEEEEEC------------------------TTCCCHHHHHHHH-HHHGGGCCSEEEC
T ss_pred -HHHHHHHH-HHHHHHcC---CcEEEEec------------------------CCCCCHHHHHHHH-HHHHhcCCCEEeC
Confidence 23344444 44443 44 68899999 4668889999975 5689999999999
Q ss_pred CCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCC
Q 013317 303 PFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~ 382 (445)
|++++|++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||+|++++++++|+++|+++++++
T Consensus 224 P~~~~~~~~~~~l~~~~~--iPI~~de~i-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~- 299 (384)
T 2pgw_A 224 PTVSWSIPAMAHVREKVG--IPIVADQAA-FTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHS- 299 (384)
T ss_dssp CSCTTCHHHHHHHHHHCS--SCEEESTTC-CSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC-
T ss_pred CCChhhHHHHHHHHhhCC--CCEEEeCCc-CCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeecc-
Confidence 999999999999999998 999999984 6799999999999999999999999999999999999999999988766
Q ss_pred CCCChhHH--HHHHHhhh
Q 013317 383 SGETEDTF--IADLSVGL 398 (445)
Q Consensus 383 ~~et~~~~--~~~la~a~ 398 (445)
+.|+.++. .+||+.++
T Consensus 300 ~~es~i~~aa~~hlaaa~ 317 (384)
T 2pgw_A 300 SFTTGITTCAEHHIGLAI 317 (384)
T ss_dssp CSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHHHhC
Confidence 57888765 45665554
No 100
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=100.00 E-value=2.8e-44 Score=361.70 Aligned_cols=297 Identities=17% Similarity=0.221 Sum_probs=224.6
Q ss_pred CcceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 1 MVTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
||||++|+++.+. .+.+ +++++|+|+||+|++|||.++... +++. ++..
T Consensus 3 ~mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~G~Ge~~~~~------------------~~~~-~~~~ 63 (359)
T 1mdl_A 3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYT------------------PVAL-KSLK 63 (359)
T ss_dssp CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECSS------------------GGGH-HHHH
T ss_pred CCEEEEEEEEEEEcCCCCCccccccccccccEEEEEEEeCCCCEEEEEeecCC------------------CchH-HHHH
Confidence 4799999998762 3444 246999999999999999654311 2233 5566
Q ss_pred HHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 69 NVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
.|++.++|.|+|+||.+++.+ +.|.+... + .++.++..+|++|||+||||+.||.+|+|||+||| |. ++
T Consensus 64 ~i~~~l~~~l~g~d~~~~~~~-~~l~~~~~---~---~~~~~~~~~a~~aid~Al~Dl~~k~~g~Pl~~llG---g~-~~ 132 (359)
T 1mdl_A 64 QLLDDMAAMIVNEPLAPVSLE-AMLAKRFC---L---AGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLG---AN-AR 132 (359)
T ss_dssp HHHHHHHHHHTTSBSCHHHHH-HHHHHHTT---T---TCSSHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CC-CC
T ss_pred HHHHHHHHHHCCCCccchHHH-HHHHHHHH---h---hccCchHHHHHHHHHHHHHHHhhhhcCCcHHHHhC---CC-CC
Confidence 787789999999999999999 88873321 1 11223456899999999999999999999999999 86 55
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
++|+ |++ +|.. +.+ +..+++.+...+||+.+| .|.|. .+.+.+.+.
T Consensus 133 ~vp~--~~~--~g~~-----~~~---------~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~~~~e~ 178 (359)
T 1mdl_A 133 PVQA--YDS--HSLD-----GVK---------LATERAVTAAELGFRAVK----TRIGY------------PALDQDLAV 178 (359)
T ss_dssp CEEE--EEE--CCSC-----HHH---------HHHHHHHHHHHTTCSEEE----EECCC------------SSHHHHHHH
T ss_pred Ceee--eee--cCCC-----CHH---------HHHHHHHHHHHcCCCEEE----EecCC------------CCHHHHHHH
Confidence 6666 543 2210 111 223455555555665443 34331 122333455
Q ss_pred HHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC
Q 013317 229 FELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD 308 (445)
Q Consensus 229 l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D 308 (445)
++.||+++ | +++.|++|+ |++||.+++++++. .++++++.|||||++++|
T Consensus 179 v~avr~a~---g--~~~~l~vDa------------------------n~~~~~~~a~~~~~-~l~~~~i~~iE~P~~~~~ 228 (359)
T 1mdl_A 179 VRSIRQAV---G--DDFGIMVDY------------------------NQSLDVPAAIKRSQ-ALQQEGVTWIEEPTLQHD 228 (359)
T ss_dssp HHHHHHHH---C--SSSEEEEEC------------------------TTCSCHHHHHHHHH-HHHHHTCSCEECCSCTTC
T ss_pred HHHHHHHh---C--CCCEEEEEC------------------------CCCCCHHHHHHHHH-HHHHhCCCeEECCCChhh
Confidence 55555554 5 579999999 46688899999854 589999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||+|++++++++|+++|+++++++ + ++
T Consensus 229 ~~~~~~l~~~~~--iPI~~de~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~-~-~~-- 301 (359)
T 1mdl_A 229 YEGHQRIQSKLN--VPVQMGENW-LGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHL-F-QE-- 301 (359)
T ss_dssp HHHHHHHHHTCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBS-C-HH--
T ss_pred HHHHHHHHHhCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeecc-H-HH--
Confidence 999999999988 999999985 6699999999999999999999999999999999999999999987665 3 22
Q ss_pred HHHHHHHhhhc
Q 013317 389 TFIADLSVGLA 399 (445)
Q Consensus 389 ~~~~~la~a~~ 399 (445)
+++|+++++.
T Consensus 302 -a~~~laaa~~ 311 (359)
T 1mdl_A 302 -ISAHLLAATP 311 (359)
T ss_dssp -HHHHHHHTCT
T ss_pred -HHHHHHHhCC
Confidence 6788887764
No 101
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=100.00 E-value=1e-43 Score=359.36 Aligned_cols=296 Identities=16% Similarity=0.147 Sum_probs=219.9
Q ss_pred cceeEEEEEEEec---------CCC----CCeEEEEEEeCCCcEEEEe-ccCCCccccccceeeccCCcccCCccHHHHH
Q 013317 2 VTINAVKARQIFD---------SRG----NPTVEVDVSLSDGTLARAA-VPSGASTGIYEALELRDGGWDYHGRGVLKAV 67 (445)
Q Consensus 2 ~~I~~v~~~~i~~---------~~g----~~~v~V~V~td~G~~G~g~-~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~ 67 (445)
|||++|+++.+.. +.| +..++|+|+||+|++|||+ +|.+.. |..+....+.
T Consensus 10 MKI~~I~~~~~~lPl~~~p~~~a~g~~~~~~~~lV~v~td~G~~G~GE~~~~~~~---------------~~~~~~~~~~ 74 (376)
T 4h2h_A 10 LKIAEIQLFQHDLPVVNGPYRIASGDVWSLTTTIVKIIAEDGTIGWGETCPVGPT---------------YAEAHAGGAL 74 (376)
T ss_dssp CBEEEEEEEEEEEEBTTCCBCCTTCCBSEEEEEEEEEEETTSCEEEEEECCSSSS---------------SSSCCHHHHH
T ss_pred eEEeEEEEEEEecccCCCCeEecCEEEEEEEEEEEEEEECCCCEEEEeecCCCCC---------------cchhhHHHHH
Confidence 7999999987731 223 3569999999999999995 444321 3333344444
Q ss_pred HHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 68 QNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
. +.+.+.|.|+|+|+.+.+..++... .+.+ ...|++|||+||||+.||.+|+|||+||| |+.+
T Consensus 75 ~-~~~~l~~~l~g~d~~~~~~~~~~~~-~~~~------------~~~A~said~ALwDl~gK~~g~Pl~~LLG---G~~r 137 (376)
T 4h2h_A 75 A-ALEVLASGLAGAEALPLPLHTRMDS-LLCG------------HNYAKSALDIAVHDLWGKRLGVPVHELLG---GALT 137 (376)
T ss_dssp H-HHHHHHHTTTTCBSSHHHHHHHHHH-HCSC------------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSC
T ss_pred H-HHHHHHHHhcCCccCcHHHHHHHHH-hhcc------------cHHHHHHHHHhhhHHHHHhcCCCceecCC---CCcC
Confidence 3 4467999999999998875554333 3221 13699999999999999999999999999 9888
Q ss_pred ceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchH
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYE 227 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 227 (445)
+++|++ .+++.. + .++..+++.+...+||+++ |.|+|. .+.+.+.+
T Consensus 138 ~~v~~y--~s~~~~-------~---------~~~~~~~a~~~~~~G~~~~----KiKvg~------------~~~~~di~ 183 (376)
T 4h2h_A 138 DSVSSY--YSLGVM-------E---------PDEAARQALEKQREGYSRL----QVKLGA------------RPIEIDIE 183 (376)
T ss_dssp SEEECE--EEECSC-------C---------HHHHHHHHHHHHHHTCSEE----EEECCS------------SCHHHHHH
T ss_pred CceeEe--eecccC-------C---------HHHHHHHHHHHHhcCceEE----EEecCC------------CCHHHHHH
Confidence 888874 333211 1 1234566666666777655 356552 11222344
Q ss_pred HHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCcc
Q 013317 228 GFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~ 307 (445)
.++.+|++++ | +++.|++|+ |+.||.++++++. +.++++++ |||||++
T Consensus 184 ~v~~vr~a~~--g--~~~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~~-~iEeP~~-- 231 (376)
T 4h2h_A 184 AIRKVWEAVR--G--TGIALAADG------------------------NRGWTTRDALRFS-RECPDIPF-VMEQPCN-- 231 (376)
T ss_dssp HHHHHHHHHT--T--SCCEEEEEC------------------------TTCCCHHHHHHHH-HHCTTSCE-EEESCSS--
T ss_pred HHHHHHhhcc--C--CeeEEEEee------------------------ccCCCHHHHHHHH-HHHhhccc-cccCCcc--
Confidence 4444444442 4 579999999 5678999999985 45788887 9999995
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~ 387 (445)
+++++++|++.++ +||++||+. .++++++++++.+++|++|+|++++||+|++++++++|+++|++++++| +.++.
T Consensus 232 ~~~~~~~l~~~~~--~pia~dE~~-~~~~~~~~~~~~~~~d~v~~d~~~~GGit~~~~ia~~a~~~gi~~~~~~-~~~~~ 307 (376)
T 4h2h_A 232 SFEDLEAIRPLCH--HALYMDEDG-TSLNTVITAAATSLVDGFGMKVSRIGGLQHMRAFRDFCAARNLPHTCDD-AWGGD 307 (376)
T ss_dssp SHHHHHHHGGGCC--SCEEESTTC-CSHHHHHHHHHTTCCSEECCBHHHHTSHHHHHHHHHHHHHHTCCEECBC-SSCSH
T ss_pred hhhhHhhhhhccc--CccccCccc-CCHHHHHHHHHhhccCccccccceeCCcHHHHHHHHHHHHcCCCEEeCC-CCccH
Confidence 6889999999988 999999984 6799999999999999999999999999999999999999999988766 46776
Q ss_pred hHH--HHHHHhhhc
Q 013317 388 DTF--IADLSVGLA 399 (445)
Q Consensus 388 ~~~--~~~la~a~~ 399 (445)
++. ++|+|.+..
T Consensus 308 i~~aa~~hlaa~~~ 321 (376)
T 4h2h_A 308 IVSAACTHIASTVL 321 (376)
T ss_dssp HHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhCC
Confidence 654 455555433
No 102
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=100.00 E-value=3.6e-44 Score=370.69 Aligned_cols=311 Identities=15% Similarity=0.145 Sum_probs=222.4
Q ss_pred cceeEEEEEEEecCC--C-------C---CeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIFDSR--G-------N---PTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~--g-------~---~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.|.-+. . . ..++|+|+||+|++|+|+++. + +.+...
T Consensus 8 ~~It~i~~~~v~~~d~~~~~~~g~h~p~~~~~~V~i~td~Gi~G~GE~~~--------------------~---~~v~~~ 64 (470)
T 3p0w_A 8 PRVTEMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGRTGVGEVPG--------------------G---EGIRQA 64 (470)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC--------------------C---HHHHHH
T ss_pred CeEEEEEEEEecCCCcccccccccCCCcceEEEEEEEECCCCEEEEeCCC--------------------h---HHHHHH
Confidence 699999999995331 1 1 258999999999999997642 1 122344
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCcccccccc--------------c-----------cchhHHHHHHHHH
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQK--------------L-----------GANAILAVSLAVC 124 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~--------------~-----------~~~A~sAvdiAlw 124 (445)
|++ ++|.|+|+||.+++.+|+.|++.+... ++++ . ..+|+||||+|||
T Consensus 65 i~~-l~p~LiG~d~~~ie~i~~~~~~~~~~~------~~~G~~~~~~~~~r~~~p~~~~g~~~~~~~~~~A~sAID~ALW 137 (470)
T 3p0w_A 65 LER-VIPLVVGQSIGRTNGVLSSIRRALAGG------GNAAHQATVHQVTSASEAAVLRQPHEINLRMDNVITAVEAALL 137 (470)
T ss_dssp HHH-TGGGTTTCBGGGHHHHHHHHHHHHC-------------------------------------CHHHHHHHHHHHHH
T ss_pred HHH-HHHHhCCCChhhHHHHHHHHHHHHhhc------CCCCcccccccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 554 899999999999999999998544211 1111 0 1379999999999
Q ss_pred HHHHHhcCCchHHHHHhhhC-CCcceeeeeeEEeecCCccCCCcccccc-------ee-----eccCCcccHHHHHHHHH
Q 013317 125 KAGAMVKKIPLYQHIANLAG-NKTLVLPVPAFNVINGGSHADNKLAMQE-------FM-----ILPIGASTFKEAMKMGV 191 (445)
Q Consensus 125 D~~ak~~g~Pl~~lLG~~~G-~~~~~ip~p~~~~~~gg~~~~~~~~~~e-------~~-----~~p~~~~~~~ea~~~~~ 191 (445)
|+.||.+|+|||+||| | +.++++|++.+....|.. ....+.+.. +. -.-.+++.++++.+...
T Consensus 138 Dl~gK~~g~Pv~~LLG---gG~~r~~v~~y~~~~~~gd~-~~t~~~~~~~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~ 213 (470)
T 3p0w_A 138 DLLGQFLEVPVAELLG---AGQQRDSAPMLAYLFYVGDR-RKTDLPYLEGANGADDWLRLRHEAAMTPAAIARLAEAATE 213 (470)
T ss_dssp HHHHHHHTSBGGGTST---TSCCCSEEEBCEEECCBCCG-GGSCSCCCCCCTTCCHHHHHTTSCBCSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcHHHHhC---CCCCCCeEEEeeeecccccc-ccccccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence 9999999999999999 6 567888885543211110 000000000 00 00011233455555554
Q ss_pred -HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccC
Q 013317 192 -EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKE 270 (445)
Q Consensus 192 -~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~ 270 (445)
+||+++ |.|+|. .+ ..+.++.+ +++|+++ +++.|+||+
T Consensus 214 ~~Gf~~~----KlKvG~------------~~---~~~Di~rv-~avRea~--pd~~L~vDa------------------- 252 (470)
T 3p0w_A 214 RYGFADF----KLKGGV------------MP---GAEEMEAI-AAIKARF--PHARVTLDP------------------- 252 (470)
T ss_dssp HHCCSEE----EEECSS------------SC---HHHHHHHH-HHHHHHC--TTSEEEEEC-------------------
T ss_pred hCCCCEE----EEeCCC------------CC---HHHHHHHH-HHHHHhC--CCCeEEeeC-------------------
Confidence 467655 345542 11 13334444 3445443 689999999
Q ss_pred CCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccC----HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCC
Q 013317 271 ENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDD----WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 346 (445)
Q Consensus 271 ~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D----~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a 346 (445)
|+.||.++++++ .+.++++ +.|||||++++| ++++++|+++++ +||++||+ +++..+++++++.++
T Consensus 253 -----N~~w~~~~Ai~~-~~~Le~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~l~~~a 322 (470)
T 3p0w_A 253 -----NGAWSLNEAIAL-CKGQGHL-VAYAEDPCGPEAGYSGREVMAEFKRATG--IPTATNMI-ATDWRQMGHAVQLHA 322 (470)
T ss_dssp -----TTBBCHHHHHHH-HTTCTTT-CSEEESCBCCBTTBCHHHHHHHHHHHHC--CCEEESSS-SCSHHHHHHHHHTTC
T ss_pred -----CCCCCHHHHHHH-HHhcccc-ceeecCCCChhhccchHHHHHHHHhcCC--CCEEeCCc-cCCHHHHHHHHHcCC
Confidence 577899999987 4567889 999999999999 799999999998 99999997 577999999999999
Q ss_pred CCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhH--HHHHHHhhhc
Q 013317 347 CNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDT--FIADLSVGLA 399 (445)
Q Consensus 347 ~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~--~~~~la~a~~ 399 (445)
+|++|+|+ ++||||++++++++|+++|+++ .+|.+.|+.++ +++||++++.
T Consensus 323 ~div~~d~-~~GGit~a~kia~lA~a~gv~~-~~h~~~e~~I~~aA~~hlaaa~p 375 (470)
T 3p0w_A 323 VDIPLADP-HFWTMQGSVRVAQLCDEWGLTW-GSHSNNHFDVSLAMFTHVAAAAP 375 (470)
T ss_dssp CSEEBCCH-HHHCHHHHHHHHHHHHHHTCCC-BCCCCSCCHHHHHHHHHHHHTCC
T ss_pred CCEEEecC-ccCCHHHHHHHHHHHHHcCCEE-EecCCcccHHHHHHHHHHHHhCC
Confidence 99999999 8999999999999999999996 56766777665 4566666653
No 103
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=100.00 E-value=5.3e-44 Score=368.10 Aligned_cols=314 Identities=13% Similarity=0.112 Sum_probs=223.3
Q ss_pred cceeEEEEEEEecCCC------------CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIFDSRG------------NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g------------~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
+|||+|+++.|.-+.. ...++|+|+||+|++|||+++.+ ......
T Consensus 5 ~~It~v~~~~v~~~d~~~~~~~g~~~~~~~~~iV~v~td~Gi~G~GE~~~~-----------------------~~v~~~ 61 (450)
T 3mzn_A 5 PKITKMNVVPVAGEDGFLLNLSGGHEPWFIRCVLVLEDESGNRGVGEIPSS-----------------------EGILNG 61 (450)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEECC-----------------------HHHHHH
T ss_pred CEEEEEEEEEecccCccccccccCCCCcceEEEEEEEECCCCEEEEeCCCc-----------------------HHHHHH
Confidence 5999999999852211 12479999999999999976421 122334
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccc------cccchhHHHHHHHHHHHHHHhcCCchHHHHHhhh
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQ------KLGANAILAVSLAVCKAGAMVKKIPLYQHIANLA 143 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~------~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~ 143 (445)
|+ .++|.|+|+||.+++++|+.|++.+.+... + |++ .+..+|+||||+||||+.||.+|+|||+|||
T Consensus 62 i~-~l~p~LiG~dp~~ie~i~~~~~~~~~~~~~--g-~~G~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG--- 134 (450)
T 3mzn_A 62 LE-KCRSLVEGARVNEVKQVLSRARGLLAQGGP--E-ERGRQTFDLRVAVHVITAIESALFDLFGQALGMPVADLLG--- 134 (450)
T ss_dssp HH-HTHHHHTTCBGGGHHHHHHHHHHHHGGGCC--C-CCCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTCBGGGGST---
T ss_pred HH-HHHHHhCCCChhhHHHHHHHHHHHhhcccC--C-CcccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---
Confidence 54 489999999999999999999854432100 0 011 1346899999999999999999999999999
Q ss_pred C--CCcceeeeeeEEeecCCccCCCcccccc-------ee-----eccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCC
Q 013317 144 G--NKTLVLPVPAFNVINGGSHADNKLAMQE-------FM-----ILPIGASTFKEAMKMGV-EVYHHLKAVIKKKYGQD 208 (445)
Q Consensus 144 G--~~~~~ip~p~~~~~~gg~~~~~~~~~~e-------~~-----~~p~~~~~~~ea~~~~~-~~~~~~k~~lk~k~G~~ 208 (445)
| +.++++|++.+....|.. ....+.+.. .. -.-.+++.++++.+... +||+++ |.|+|.
T Consensus 135 ~~G~~r~~v~~y~~~~~~gd~-~~t~~~~~s~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~----KlKvG~- 208 (450)
T 3mzn_A 135 QYGRQRDEVEALGYLFLLGDP-DKTDLPYPRVADPVDAWDEVRYREAMTPEAVANLARAAYDRYGFKDF----KLKGGV- 208 (450)
T ss_dssp TTCCCCSEEEBCEEEECBCCG-GGSSSCCCCCSSCCSHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSEE----EEECSS-
T ss_pred CCCCcCceEEeeeeecccccc-ccccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEE----EECCCC-
Confidence 6 457888886543222210 000000000 00 00011233445555444 366654 345441
Q ss_pred CcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHH
Q 013317 209 ATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVY 288 (445)
Q Consensus 209 ~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~ 288 (445)
.+ ..+.++.+ +++|+++ +++.|+||+ |+.||.++++++
T Consensus 209 -----------~~---~~~Di~~v-~avRea~--pd~~L~vDa------------------------N~~w~~~~A~~~- 246 (450)
T 3mzn_A 209 -----------LR---GEEEADCI-RALHEAF--PEARLALDP------------------------NGAWKLDEAVRV- 246 (450)
T ss_dssp -----------SC---HHHHHHHH-HHHHHHC--TTSEEEEEC------------------------TTCBCHHHHHHH-
T ss_pred -----------CC---HHHHHHHH-HHHHHhC--CCCeEEEEC------------------------CCCCCHHHHHHH-
Confidence 11 13344444 3445443 689999999 577899999987
Q ss_pred HHhhhcCCeeEEECCCCccC----HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHH
Q 013317 289 RSFISDHPIVSIEDPFDQDD----WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESI 364 (445)
Q Consensus 289 ~~~~~~~~i~~iEdP~~~~D----~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~ 364 (445)
.+.++++ +.|||||++++| ++++++|+++++ +||++||+ +++..+++++++.+++|++|+|+ ++||||+++
T Consensus 247 ~~~L~~~-i~~iEeP~~~~d~~~~~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~i~~~a~di~~~d~-~~GGit~a~ 321 (450)
T 3mzn_A 247 LEPIKHL-LSYAEDPCGQEGGFSGRETMAEFKKRTG--LPTATNMI-ATDYKQLQYAVQLNSVDIPLADC-HFWTMQGAV 321 (450)
T ss_dssp HGGGGGG-CSEEESSBCCBTTBCHHHHHHHHHHHHC--CCEEESSS-SSSHHHHHHHHHHTCCSEEBCCH-HHHCHHHHH
T ss_pred HHHhhhc-cceeeCCCCcccccchHHHHHHHHHhcC--CCEEeCCc-cCCHHHHHHHHHcCCCCEEEecC-ccCCHHHHH
Confidence 4567899 999999999999 799999999999 99999997 57799999999999999999999 799999999
Q ss_pred HHHHHHHHcCCcEEecCCCCCChhH--HHHHHHhhhc
Q 013317 365 EAVKMAKRAGWGVMASHRSGETEDT--FIADLSVGLA 399 (445)
Q Consensus 365 ~i~~~A~~~g~~~~~~~~~~et~~~--~~~~la~a~~ 399 (445)
+++++|+++|+++ .+|.+.++.++ +++||+.++.
T Consensus 322 kia~lA~a~gv~~-~~h~~~~~~I~~aA~~hlaaa~p 357 (450)
T 3mzn_A 322 AVGELCNEWGMTW-GSHSNNHFDISLAMMTHVAAACP 357 (450)
T ss_dssp HHHHHHHHTTCCC-BCCCCSCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCEE-EecCCcccHHHHHHHHHHHHhCC
Confidence 9999999999996 56766777665 4556666643
No 104
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=100.00 E-value=6.4e-44 Score=363.90 Aligned_cols=275 Identities=16% Similarity=0.145 Sum_probs=210.5
Q ss_pred eEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhcc
Q 013317 20 TVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDG 99 (445)
Q Consensus 20 ~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~ 99 (445)
+|+|+|+|++|++|||+++.+ +.++..+++.|+|.|+|+||.+++.+|+.|.+...+
T Consensus 71 ~v~V~v~td~G~~G~GE~~~g-----------------------~~~~~~v~~~l~p~LiG~d~~~~~~i~~~m~~~~~~ 127 (415)
T 2p3z_A 71 TLIVEVEAENRQTGFAVSTAG-----------------------EMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATMY 127 (415)
T ss_dssp EEEEEEEETTSCEEEEEEECH-----------------------HHHHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHTT
T ss_pred EEEEEEEECCCCEEEEEecCC-----------------------HHHHHHHHHHHHHHHCCCChhhHHHHHHHHHHhhhc
Confidence 689999999999999976531 223345678899999999999999999999832211
Q ss_pred CCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCCccCCCcccccceeeccCC
Q 013317 100 TVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILPIG 179 (445)
Q Consensus 100 ~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~ 179 (445)
.. |+++++.+|++|||+||||+.||.+|+|||+||| |..++++|+ |++ |+.
T Consensus 128 ~~-----g~~~~~~~A~said~ALwDl~ak~~g~Pl~~lLG---G~~~~~vp~--y~~--g~~----------------- 178 (415)
T 2p3z_A 128 YS-----GSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLG---GAVRDEIQF--YAT--GAR----------------- 178 (415)
T ss_dssp TS-----TTSSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSSSEEEE--EEE--SSC-----------------
T ss_pred cc-----CCCcchHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCceee--eec--CCC-----------------
Confidence 11 2455667899999999999999999999999999 976667665 553 220
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccc
Q 013317 180 ASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDR 259 (445)
Q Consensus 180 ~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~ 259 (445)
.+++++ .+|+++| .|+| .++++++. +++.+.+.++++|+++ | +++.|++|+
T Consensus 179 ---~~~~~~---~G~~~~K----iK~g-----~g~~~G~~-~~~~d~~~v~avrea~---G--~~~~L~vDa-------- 229 (415)
T 2p3z_A 179 ---PDLAKE---MGFIGGK----MPTH-----WGPHDGDA-GIRKDAAMVADMREKC---G--PDFWLMLDC-------- 229 (415)
T ss_dssp ---HHHHHH---HTCSEEE----EECC-----CCGGGHHH-HHHHHHHHHHHHHHHH---C--SSSEEEEEC--------
T ss_pred ---HHHHHH---hCcceEE----Eecc-----cCcccccc-cHHHHHHHHHHHHHHh---C--CCCEEEEEC--------
Confidence 122322 3566553 3433 12223321 1223345555555544 5 579999999
Q ss_pred cCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHH
Q 013317 260 KDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVE 339 (445)
Q Consensus 260 ~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~ 339 (445)
|+.||.+++++++.+ +++|++.|||||++++|+++|++|+++++.++||++||++ .++++++
T Consensus 230 ----------------N~~~~~~~Ai~~~~~-l~~~~i~~iEqPl~~~d~~~~~~l~~~~~~~ipIa~dE~~-~~~~~~~ 291 (415)
T 2p3z_A 230 ----------------WMSQDVNYATKLAHA-CAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHH-GTLQSFR 291 (415)
T ss_dssp ----------------TTCCCHHHHHHHHHH-HGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTC-CSHHHHH
T ss_pred ----------------CCCCCHHHHHHHHHH-HhhcCCceEeCCCCcchHHHHHHHHHhcCCCCcEEcCCCC-CCHHHHH
Confidence 466889999998654 8999999999999999999999999998655899999996 5699999
Q ss_pred HHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhc
Q 013317 340 KAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLA 399 (445)
Q Consensus 340 ~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~ 399 (445)
++++.+ +|++|||++|+||||++++++++|+++|+++++ |++ ....+||+.++.
T Consensus 292 ~~i~~~-~d~i~ik~~~~GGitea~~ia~lA~~~gi~v~~-h~~----~~a~~hlaaa~p 345 (415)
T 2p3z_A 292 TLAETG-IDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVP-HGS----SVYSHHAVITFT 345 (415)
T ss_dssp HHHHTT-CSEECCCHHHHTCHHHHHHHHHHHHHTTCCBCC-CCC----HHHHHHHHTTCT
T ss_pred HHHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe-cCh----HHHHHHHHHhCC
Confidence 999999 999999999999999999999999999999875 543 234678887654
No 105
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=100.00 E-value=1.2e-43 Score=366.02 Aligned_cols=314 Identities=16% Similarity=0.127 Sum_probs=220.0
Q ss_pred cceeEEEEEEEecC--C-----C-----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIFDS--R-----G-----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~~~--~-----g-----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
++||+|+++.|.-+ . | ...++|+|+||+|++|||+++.+ ......
T Consensus 9 ~~It~v~v~~v~~~d~~~~~~~g~h~~~~~~~iV~v~td~Gi~G~GE~~~~-----------------------~~v~~~ 65 (455)
T 3pfr_A 9 PVITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGG-----------------------ATIENA 65 (455)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEECS-----------------------HHHHHH
T ss_pred CEEEEEEEEEeccCCccccccccCCCCcceEEEEEEEECCCCEEEEeCCCc-----------------------HHHHHH
Confidence 69999999999522 1 1 13479999999999999976421 122334
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHH--hhccCCCcccccccc----ccchhHHHHHHHHHHHHHHhcCCchHHHHHhhh
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQ--QLDGTVNEWGWCKQK----LGANAILAVSLAVCKAGAMVKKIPLYQHIANLA 143 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~--~l~~~~~~~~~~~~~----~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~ 143 (445)
|+ .++|.|+|+||.+++++|+.|++ .+.+... .|++. +..+|+||||+||||+.||.+|+|||+|||
T Consensus 66 i~-~l~p~LiG~dp~~ie~i~~~~~~~~~~~~~~~---g~~G~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLG--- 138 (455)
T 3pfr_A 66 LT-EAIPHVVGRPISILNKIVNDMHNGYLDADYDT---FGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLG--- 138 (455)
T ss_dssp HH-HHGGGTTTCBGGGHHHHHHHHHC------------------CHHHHHHHHHHHHHHHHHHHHHHHTSBGGGGST---
T ss_pred HH-HHHHHhcCCChhHHHHHHHHHHhhccccccCC---CCcccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---
Confidence 54 58999999999999999999983 1211000 00111 115799999999999999999999999999
Q ss_pred C-CCcceeeeeeEEeecCCccCCCccccc-------cee-----eccCCcccHHHHHHHHH-HHHHHHHHHHHhhcCCCC
Q 013317 144 G-NKTLVLPVPAFNVINGGSHADNKLAMQ-------EFM-----ILPIGASTFKEAMKMGV-EVYHHLKAVIKKKYGQDA 209 (445)
Q Consensus 144 G-~~~~~ip~p~~~~~~gg~~~~~~~~~~-------e~~-----~~p~~~~~~~ea~~~~~-~~~~~~k~~lk~k~G~~~ 209 (445)
| +.++++|++.+....|.. ....+.+. .+. ..-.+++.++++.+... +||+++ |.|+|.
T Consensus 139 gG~~r~~v~~y~~~~~~gd~-~~~~~~~~~s~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~----KlKvG~-- 211 (455)
T 3pfr_A 139 PGKQRDEVTVLGYLFYVGDD-KITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDF----KLKGGV-- 211 (455)
T ss_dssp TSCCCSEEEBCEEECCBCCG-GGSCSCCCCCCCSSCTHHHHTTSCBCSHHHHHHHHHHHHHHHCCSCE----EEECSS--
T ss_pred CCCcCCeEEEeeeecccccc-ccccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEE----EEcCCC--
Confidence 5 567888886543222210 00000000 000 00011233444544443 366554 345441
Q ss_pred cccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHH
Q 013317 210 TNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYR 289 (445)
Q Consensus 210 ~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~ 289 (445)
.+ ..+.++.+ +++|+++ +++.|+||+ |+.||.++++++ .
T Consensus 212 ----------~~---~~~Di~~v-~avRea~--pd~~L~vDa------------------------N~~w~~~~A~~~-~ 250 (455)
T 3pfr_A 212 ----------FE---GSKEIDTV-IELKKHF--PDARITLDP------------------------NGCWSLDEAIQL-C 250 (455)
T ss_dssp ----------SC---HHHHHHHH-HHHHHHC--TTCCEEEEC------------------------TTBSCHHHHHHH-H
T ss_pred ----------CC---HHHHHHHH-HHHHHhC--CCCeEeecC------------------------CCCCCHHHHHHH-H
Confidence 11 13334444 3445443 679999999 577899999987 4
Q ss_pred HhhhcCCeeEEECCCCccC----HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHH
Q 013317 290 SFISDHPIVSIEDPFDQDD----WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIE 365 (445)
Q Consensus 290 ~~~~~~~i~~iEdP~~~~D----~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~ 365 (445)
+.++++ +.|||||++++| ++++++|+++++ +||++||+ +++.++++++++.+++|++|+|+ ++||||++++
T Consensus 251 ~~L~~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~i~~~a~di~~~d~-~~GGit~a~k 325 (455)
T 3pfr_A 251 KGLNDV-LTYAEDPCIGENGYSGREIMAEFRRRTG--IPTATNMI-ATNWREMCHAIMLQSVDIPLADP-HFWTLTGASR 325 (455)
T ss_dssp TTCTTT-CSEEESCBCCBTTBCHHHHHHHHHHHHC--CCEEESSS-CCSHHHHHHHHHHTCCSEEBCCH-HHHCHHHHHH
T ss_pred Hhhccc-ceeeecCCChhhccchHHHHHHHHhcCC--CCEEeCCC-cCCHHHHHHHHHcCCCCEEEecC-CcCCHHHHHH
Confidence 567889 999999999999 799999999998 99999997 57799999999999999999998 7999999999
Q ss_pred HHHHHHHcCCcEEecCCCCCChhH--HHHHHHhhhc
Q 013317 366 AVKMAKRAGWGVMASHRSGETEDT--FIADLSVGLA 399 (445)
Q Consensus 366 i~~~A~~~g~~~~~~~~~~et~~~--~~~~la~a~~ 399 (445)
++++|+++|+++ .+|.+.++.++ +++||++++.
T Consensus 326 ia~lA~a~gv~~-~~h~~~~~~i~~aa~~hlaaa~p 360 (455)
T 3pfr_A 326 VAQLCNEWGLTW-GCHSNNHFDISLAMFSHVGAAAP 360 (455)
T ss_dssp HHHHHHHTTCCC-BCCCCSCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCEE-EecCCcccHHHHHHHHHHHHhCC
Confidence 999999999996 56766777665 4567766654
No 106
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=100.00 E-value=2.7e-43 Score=363.46 Aligned_cols=304 Identities=19% Similarity=0.189 Sum_probs=218.1
Q ss_pred CcceeEEEEEEEecC--------C------CCCeEEEEEEeCC--CcEEEEeccCCCccccccceeeccCCcccCCccHH
Q 013317 1 MVTINAVKARQIFDS--------R------GNPTVEVDVSLSD--GTLARAAVPSGASTGIYEALELRDGGWDYHGRGVL 64 (445)
Q Consensus 1 ~~~I~~v~~~~i~~~--------~------g~~~v~V~V~td~--G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~ 64 (445)
||||++|+++.+.-. . ...+++|+|+||+ |++|||.+++. | + +.+
T Consensus 1 mmkI~~i~~~~~~~p~~~p~~~~~~~~~~~~~~~~~V~v~td~~~G~~G~Ge~~~~---g-------------~---~~~ 61 (441)
T 2hxt_A 1 MRTIIALETHDVRFPTSRELDGSDAMNPDPDYSAAYVVLRTDGAEDLAGYGLVFTI---G-------------R---GND 61 (441)
T ss_dssp -CBEEEEEEEEEECCGGGTTTTCCSSCSSCCCEEEEEEEEESSCTTCEEEEEEEEC---S-------------T---THH
T ss_pred CCcEEEEEEEEEEecCCCCcCcccccccCCCcceEEEEEEECCCCCCEEEEeecCC---C-------------C---CcH
Confidence 899999999988311 0 1246999999998 99999965431 1 1 123
Q ss_pred HHHHHHHHhHhhhccCCCCCCHHH----HHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHH
Q 013317 65 KAVQNVNSIIGPALVGKDPTEQTQ----IDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIA 140 (445)
Q Consensus 65 ~a~~~i~~~l~p~LiG~d~~~~~~----i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG 140 (445)
.....++ .|+|.|+|+||.+++. +|+.|. ...+.. |..+..++..+|++|||+||||+.||.+|+|||+|||
T Consensus 62 ~v~~~i~-~l~~~liG~d~~~~~~~~~~~~~~l~-~~~~~~--~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLG 137 (441)
T 2hxt_A 62 VQTAAVA-ALAEHVVGLSVDKVIADLGAFARRLT-NDSQLR--WLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIA 137 (441)
T ss_dssp HHHHHHH-TTHHHHTTCBHHHHHHCHHHHHHHHH-TCHHHH--HTCSSSHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHH
T ss_pred HHHHHHH-HHHHHHcCCChHHHHhhHHHHHHHHH-hccccc--cccccccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhc
Confidence 3344454 7999999999999875 566665 211100 0000122335899999999999999999999999999
Q ss_pred hhhCCCccee---------------------------------------eeeeEEeecCCccCCCcccccceeeccCCcc
Q 013317 141 NLAGNKTLVL---------------------------------------PVPAFNVINGGSHADNKLAMQEFMILPIGAS 181 (445)
Q Consensus 141 ~~~G~~~~~i---------------------------------------p~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~ 181 (445)
|..++.+ ++|+|++..|+.. .+. ++
T Consensus 138 ---G~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~vp~y~~~~g~~~----~~~---------e~ 201 (441)
T 2hxt_A 138 ---ELTPEQLVDTIDFRYLSDALTRDEALAILRDAQPQRAARTATLIEQGYPAYTTSPGWLG----YSD---------EK 201 (441)
T ss_dssp ---TSCHHHHHHHCCCTTCTTTCCHHHHHHHHHHHGGGHHHHHHHHHHHCEEEEEEEEECTT----SCH---------HH
T ss_pred ---CCCcccccccccccccccccchhhhhhhhhcccccchhhhhhcccCCcceeEecccccC----CCH---------HH
Confidence 8653221 5666775433211 111 22
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccC
Q 013317 182 TFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKD 261 (445)
Q Consensus 182 ~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~ 261 (445)
.++++.+...+||+.+| .|.|. +.+.+.+.+++||+++ | +++.|++|+
T Consensus 202 ~~~~a~~~~~~Gf~~vK----ik~g~-------------~~~~d~e~v~avR~a~---G--~d~~l~vDa---------- 249 (441)
T 2hxt_A 202 LVRLAKEAVADGFRTIK----LKVGA-------------NVQDDIRRCRLARAAI---G--PDIAMAVDA---------- 249 (441)
T ss_dssp HHHHHHHHHHTTCSEEE----EECCS-------------CHHHHHHHHHHHHHHH---C--SSSEEEEEC----------
T ss_pred HHHHHHHHHHcCCCEEE----EccCC-------------CHHHHHHHHHHHHHhc---C--CCCeEEEEC----------
Confidence 34566666666676553 34431 1233345555555554 5 579999999
Q ss_pred cceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHh-CCceEEEeccccccCHHHHHH
Q 013317 262 KTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKI-GRHVQIVGDDLLVTNPKRVEK 340 (445)
Q Consensus 262 ~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~-~~~~pI~gde~~~~~~~~~~~ 340 (445)
|++||.+++++++. .++++++.|||||++++|++++++|++++ + +||++||+ +++++++++
T Consensus 250 --------------n~~~~~~~a~~~~~-~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~--iPIa~dE~-~~~~~~~~~ 311 (441)
T 2hxt_A 250 --------------NQRWDVGPAIDWMR-QLAEFDIAWIEEPTSPDDVLGHAAIRQGITP--VPVSTGEH-TQNRVVFKQ 311 (441)
T ss_dssp --------------TTCCCHHHHHHHHH-TTGGGCCSCEECCSCTTCHHHHHHHHHHHTT--SCEEECTT-CCSHHHHHH
T ss_pred --------------CCCCCHHHHHHHHH-HHHhcCCCeeeCCCCHHHHHHHHHHHhhCCC--CCEEEeCC-cCCHHHHHH
Confidence 46788999999854 58999999999999999999999999998 5 99999998 578999999
Q ss_pred HHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHH-HHHHH
Q 013317 341 AIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTF-IADLS 395 (445)
Q Consensus 341 ~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~-~~~la 395 (445)
+++.+++|+++||++++||||++++++++|+++|+++ ++|.+ ....+. ..|++
T Consensus 312 ~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~-~~h~~-~~~~~~~~~~~a 365 (441)
T 2hxt_A 312 LLQAGAVDLIQIDAARVGGVNENLAILLLAAKFGVRV-FPHAG-GVGLCELVQHLA 365 (441)
T ss_dssp HHHHTCCSEECCCTTTSSHHHHHHHHHHHHHHTTCEE-CCCCC-STTHHHHHHHHH
T ss_pred HHHcCCCCEEEeCcceeCCHHHHHHHHHHHHHcCCeE-EEecC-hHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 47743 333332 33554
No 107
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=100.00 E-value=2e-42 Score=351.89 Aligned_cols=304 Identities=15% Similarity=0.133 Sum_probs=220.6
Q ss_pred cceeEEEEEEEe------cCCC----CCeEEEEEEeC---CCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHH
Q 013317 2 VTINAVKARQIF------DSRG----NPTVEVDVSLS---DGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQ 68 (445)
Q Consensus 2 ~~I~~v~~~~i~------~~~g----~~~v~V~V~td---~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~ 68 (445)
|||++|+...+- ++.+ +++++|+|+|+ +|++|||+++.+ +.++++ ..
T Consensus 6 mkI~~i~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~~~~G~~G~GE~~~~-----------------~~~~~~---~~ 65 (392)
T 1tzz_A 6 VRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFNS-----------------NGRYGQ---GG 65 (392)
T ss_dssp CCEEEEEEEEEECCC---------CCCEEEEEEEEEEEECSSSEEEEEEECC-----------------TTSCCC---HH
T ss_pred cEEeEEEEEEecCCCcccccccccCcceEEEEEEEECCCCCCCEEEEEecCC-----------------CchHHH---HH
Confidence 799999955442 2222 35799999999 999999966532 112223 33
Q ss_pred HHHHhHhhhccCCCC----------CCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHH
Q 013317 69 NVNSIIGPALVGKDP----------TEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQH 138 (445)
Q Consensus 69 ~i~~~l~p~LiG~d~----------~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~l 138 (445)
.+++.++|.|+|+|| .+++.+|+.|. ......+ + .+..+|++|||+||||+.||.+|+|||+|
T Consensus 66 ~i~~~l~~~l~G~d~~~~~~~~~~~~~~~~i~~~l~-~~~~~~~-----~-~~~~~a~~aid~AlwDl~ak~~g~Pl~~l 138 (392)
T 1tzz_A 66 LIRERFASRILEADPKKLLNEAGDNLDPDKVWAAMM-INEKPGG-----H-GERSVAVGTIDMAVWDAVAKIAGKPLFRL 138 (392)
T ss_dssp HHHHTHHHHHHTSCGGGSBCTTSSSBCHHHHHHHHT-TTCCSCC-----C-SHHHHHHHHHHHHHHHHHHHHHTSBHHHH
T ss_pred HHHHHHHHHHcCCCchhhhcccccccCHHHHHHHHH-HhccccC-----c-cHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 466779999999999 99999999997 4322111 2 25578999999999999999999999999
Q ss_pred HHhhhCC-CcceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCC
Q 013317 139 IANLAGN-KTLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGG 217 (445)
Q Consensus 139 LG~~~G~-~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~ 217 (445)
||..+|. .++++|+ |++ +|+.+.. .+. ++..+++.+...+||+.+ |.|+|.
T Consensus 139 lG~~~~g~~~~~v~~--y~~-~~~~~~~--~~~---------~~~~~~a~~~~~~Gf~~i----Kik~g~---------- 190 (392)
T 1tzz_A 139 LAERHGVKANPRVFV--YAA-GGYYYPG--KGL---------SMLRGEMRGYLDRGYNVV----KMKIGG---------- 190 (392)
T ss_dssp HHHHTTSCCCCEEEE--EEE-CCCC------CH---------HHHHHHHHHHHTTTCSEE----EEECSS----------
T ss_pred cCCccCCCcCCCeeE--EEe-CCcccCC--CCH---------HHHHHHHHHHHHcCCCEE----EEcCCC----------
Confidence 9855433 4445554 664 2322210 011 223344544444555444 234331
Q ss_pred CCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCe
Q 013317 218 FAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPI 297 (445)
Q Consensus 218 ~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i 297 (445)
.+.+.+.+.++.||+++ | +++.|++|+ |++||.+++++++. .+++|++
T Consensus 191 --~~~~~~~e~v~avr~a~---g--~~~~l~vDa------------------------n~~~~~~~a~~~~~-~l~~~~i 238 (392)
T 1tzz_A 191 --APIEEDRMRIEAVLEEI---G--KDAQLAVDA------------------------NGRFNLETGIAYAK-MLRDYPL 238 (392)
T ss_dssp --SCHHHHHHHHHHHHHHH---T--TTCEEEEEC------------------------TTCCCHHHHHHHHH-HHTTSCC
T ss_pred --CCHHHHHHHHHHHHHhc---C--CCCeEEEEC------------------------CCCCCHHHHHHHHH-HHHHcCC
Confidence 12233345555555554 5 579999999 46688999999854 5899999
Q ss_pred eEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcC----CCCEEEeccCccccHHHHHHHHHHHHHc
Q 013317 298 VSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEK----TCNALLLKVNQIGSVTESIEAVKMAKRA 373 (445)
Q Consensus 298 ~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~----a~d~v~ik~~k~GGit~a~~i~~~A~~~ 373 (445)
.|||||++++|++++++|+++++ +||++||+ ++++++++++++.+ ++|++++|++++||||++++++++|+++
T Consensus 239 ~~iEqP~~~~d~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~ 315 (392)
T 1tzz_A 239 FWYEEVGDPLDYALQAALAEFYP--GPMATGEN-LFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCEYQRTLEVLKTH 315 (392)
T ss_dssp SEEECCSCTTCHHHHHHHTTTCC--SCEEECTT-CCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHHHHHHHHHHHHT
T ss_pred CeecCCCChhhHHHHHHHHhhCC--CCEEECCC-CCCHHHHHHHHHcCCCccCCcEEEECccccCCHHHHHHHHHHHHHC
Confidence 99999999999999999999988 99999998 47899999999999 9999999999999999999999999999
Q ss_pred CCc---EEecCCCCCChhHHHHHHHhhhcC
Q 013317 374 GWG---VMASHRSGETEDTFIADLSVGLAT 400 (445)
Q Consensus 374 g~~---~~~~~~~~et~~~~~~~la~a~~~ 400 (445)
|++ +++++ .+. ..+|++.++..
T Consensus 316 gi~~~~~~~~~----~~~-~~~hl~aa~~~ 340 (392)
T 1tzz_A 316 GWSPSRCIPHG----GHQ-MSLNIAAGLGL 340 (392)
T ss_dssp TCCGGGBCCSC----CBH-HHHHHHHHHTC
T ss_pred CCCCceEeecH----HHH-HHHHHHHhCCC
Confidence 999 87663 112 23788877653
No 108
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=100.00 E-value=5.1e-43 Score=357.38 Aligned_cols=300 Identities=13% Similarity=0.152 Sum_probs=218.6
Q ss_pred cceeEEEEEEEecCCC-------CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHH--HHHHHHHH
Q 013317 2 VTINAVKARQIFDSRG-------NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVL--KAVQNVNS 72 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g-------~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~--~a~~~i~~ 72 (445)
|||++|+++.+..... +++++|+|+|| |++|||+++..+ |.+++.. ++...|++
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~~~~~~V~v~td-G~~G~GE~~~~~----------------~~~~~~~~~~~~~~i~~ 65 (401)
T 2hzg_A 3 LKIDAVDLFYLSMPEVTDAADGSQDALLVRVAAG-GHIGWGECEAAP----------------LPSIAAFVCPKSHGVCR 65 (401)
T ss_dssp CBEEEEEEEEEECSSCCSSSCGGGEEEEEEEEET-TEEEEEEECSCH----------------HHHHHHHHCCCSBTTBC
T ss_pred CEEEEEEEEEEeccCCCccccccceEEEEEEEeC-CcEEEEeeeccc----------------CCcccchhHHHHHHHHH
Confidence 8999999998853221 45899999999 999999765421 1111111 22334666
Q ss_pred hHhhhccCCCCCCHH-HHHHHHHHhhccCCCcccccccc--ccch--hHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 73 IIGPALVGKDPTEQT-QIDNFMVQQLDGTVNEWGWCKQK--LGAN--AILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 73 ~l~p~LiG~d~~~~~-~i~~~l~~~l~~~~~~~~~~~~~--~~~~--A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
.++|.|+|+ |.+++ .+++.+. .+. +.+ +..+ |++||||||||+.||.+|+|||+||| |..+
T Consensus 66 ~l~~~l~G~-~~~~~~~l~~~~~-~~~---------~~g~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~ 131 (401)
T 2hzg_A 66 PVSDSVLGQ-RLDGPDDIARIAA-LVG---------YNSMDLLQAPHMLSGIEMALWDLLGRRLSAPAWALLG---YSAS 131 (401)
T ss_dssp CGGGGTTTC-BCSSHHHHHHHHH-HHH---------HHTTTCTTHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CSCC
T ss_pred HHHHHhCCC-CCCHHHHHHHHHH-hhc---------cCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCC
Confidence 789999999 99986 2222221 110 111 3357 99999999999999999999999999 9766
Q ss_pred ceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCc-cCch
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI-QESY 226 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~-~~~~ 226 (445)
+++|+ |+++.++. +.+ +..+++.+...++|+.+| .|. ..+| + ++ +.+.
T Consensus 132 ~~vp~--~~~~~~~~------~~~---------~~~~~a~~~~~~Gf~~iK----ik~----spvG---~---~~~~~~~ 180 (401)
T 2hzg_A 132 HGKRP--YASLLFGD------TPQ---------ETLERARAARRDGFAAVK----FGW----GPIG---R---GTVAADA 180 (401)
T ss_dssp CCBEE--EEEEECCS------SHH---------HHHHHHHHHHHTTCSEEE----EES----TTTT---S---SCHHHHH
T ss_pred CceEe--eEEcCCCC------CHH---------HHHHHHHHHHHhCCCeEE----EcC----CCCC---C---CHHHHHH
Confidence 77776 43332210 122 224455555555665543 331 0021 1 22 2335
Q ss_pred HHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCc--ChHHHHHHHHHhhhcCCeeEEECCC
Q 013317 227 EGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKV--SGDGLKNVYRSFISDHPIVSIEDPF 304 (445)
Q Consensus 227 ~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~--t~~~~i~~~~~~~~~~~i~~iEdP~ 304 (445)
+.+++||+++ | +++.|++|+ |++| |.+++++++. .++++++.|||||+
T Consensus 181 e~v~avr~a~---G--~d~~l~vDa------------------------n~~~~~~~~~a~~~~~-~l~~~~i~~iEqP~ 230 (401)
T 2hzg_A 181 DQIMAAREGL---G--PDGDLMVDV------------------------GQIFGEDVEAAAARLP-TLDAAGVLWLEEPF 230 (401)
T ss_dssp HHHHHHHHHH---C--SSSEEEEEC------------------------TTTTTTCHHHHHTTHH-HHHHTTCSEEECCS
T ss_pred HHHHHHHHHh---C--CCCeEEEEC------------------------CCCCCCCHHHHHHHHH-HHHhcCCCEEECCC
Confidence 5565555554 5 579999999 4668 8899999854 58999999999999
Q ss_pred CccCHHHHHHHHH-HhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCC
Q 013317 305 DQDDWEHYAELTG-KIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRS 383 (445)
Q Consensus 305 ~~~D~~~~~~L~~-~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~ 383 (445)
+++|++++++|++ +++ +||++||+. .++++++++++.+++|+++||++++||+|++++++++|+++|++++ +| +
T Consensus 231 ~~~d~~~~~~l~~~~~~--iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~-~h-~ 305 (401)
T 2hzg_A 231 DAGALAAHAALAGRGAR--VRIAGGEAA-HNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYV-NH-T 305 (401)
T ss_dssp CTTCHHHHHHHHTTCCS--SEEEECTTC-SSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEE-EC-C
T ss_pred CccCHHHHHHHHhhCCC--CCEEecCCc-CCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEe-cC-C
Confidence 9999999999999 887 999999985 6699999999999999999999999999999999999999999976 66 6
Q ss_pred CCChhHHHHHHHhhh
Q 013317 384 GETEDTFIADLSVGL 398 (445)
Q Consensus 384 ~et~~~~~~~la~a~ 398 (445)
.||.++.++.++++.
T Consensus 306 ~es~i~~~a~~hlaa 320 (401)
T 2hzg_A 306 FTSHLALSASLQPFA 320 (401)
T ss_dssp CSCHHHHHHHHGGGT
T ss_pred CCcHHHHHHHHHHHH
Confidence 899888765555543
No 109
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=100.00 E-value=4.1e-42 Score=355.79 Aligned_cols=316 Identities=17% Similarity=0.205 Sum_probs=215.0
Q ss_pred ceeEEEEEEEe--cC-----CC--CCe---EEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHH
Q 013317 3 TINAVKARQIF--DS-----RG--NPT---VEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNV 70 (445)
Q Consensus 3 ~I~~v~~~~i~--~~-----~g--~~~---v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i 70 (445)
+|+++++.+|. |+ .| .|. .+|+|+||+|++|||.++.+ +.+ .+.|
T Consensus 27 ~i~~~~v~pva~~d~~l~~~~g~h~p~f~RtiV~v~Td~Gi~G~GE~~g~--------------------~~~---~~~l 83 (464)
T 4g8t_A 27 IITEMQVIPVAGHDSMLLNLSGAHSPYFTRNIVILKDNSGNTGVGEVPGG--------------------EKI---RQTL 83 (464)
T ss_dssp BEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEECC--------------------HHH---HHHH
T ss_pred EEeEEEEEEecCCCcccccCCcccCCccceEEEEEEECCCCEEEEeCCCc--------------------HHH---HHHH
Confidence 79999999983 32 22 332 57999999999999976532 112 2334
Q ss_pred HHhHhhhccCCCCCCHHHHHHHHHHhhccCCCc---cccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q 013317 71 NSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNE---WGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKT 147 (445)
Q Consensus 71 ~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~---~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~ 147 (445)
+ .++|.|+|+||.+++.+|+.|++.+...... +..+.......|+||||+||||+.||.+|+|||+|||. |+.|
T Consensus 84 e-~~~p~liG~dp~~ie~i~~~l~~~~~~~~~~g~g~~~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGg--G~~R 160 (464)
T 4g8t_A 84 E-DAKPLVIGKTLGEYKNVMNTVRQTFNDHDAGGRGLQTFDLRTTIHVVTAIEAAMLDLLGQFLGVTVASLLGD--GQQR 160 (464)
T ss_dssp H-HHGGGTTTCBGGGHHHHHHHHHHHTTTSCTTTTCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTSBTGGGSTT--SCCC
T ss_pred H-HHHHHHcCCCHHHHHHHHHHHHHHhhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC--CCCC
Confidence 3 5899999999999999999998444321100 00001123357999999999999999999999999982 3678
Q ss_pred ceeeeeeEEeecCCccCCCccccc-------ceeecc-CCcccHHHHHHHHHH-----HHHHHHHHHHhhcCCCCcccCC
Q 013317 148 LVLPVPAFNVINGGSHADNKLAMQ-------EFMILP-IGASTFKEAMKMGVE-----VYHHLKAVIKKKYGQDATNVGD 214 (445)
Q Consensus 148 ~~ip~p~~~~~~gg~~~~~~~~~~-------e~~~~p-~~~~~~~ea~~~~~~-----~~~~~k~~lk~k~G~~~~~~~~ 214 (445)
+++|++.+....+.... ...... ..+... ....+..+.++...+ ||+++ |.|+|.
T Consensus 161 d~V~~y~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~----KlKvG~------- 228 (464)
T 4g8t_A 161 DAVEMLGYLFFIGDRKK-TTLAYQNQENDPCDWYRVRHEEAMTPESVVRLAEAAYEKYGFNDF----KLKGGV------- 228 (464)
T ss_dssp SEEEBCEEECCBCCGGG-SCSCCCCCTTCSSHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSCE----EEECSS-------
T ss_pred ceEEEEEEeeccCcccc-cchhhhcccccccchhhhcccccCCHHHHHHHHHHHHHHcCCCeE----EEeCCC-------
Confidence 89998766543321100 000000 000000 000112222222222 33322 334331
Q ss_pred CCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhc
Q 013317 215 EGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD 294 (445)
Q Consensus 215 ~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~ 294 (445)
.+ ..+.++.+ +++|++. +++.|+||+ |+.||.++++++ .+.+++
T Consensus 229 -----~~---~~~di~~v-~avrea~--pd~~L~vDa------------------------N~~wt~~~Ai~~-~~~le~ 272 (464)
T 4g8t_A 229 -----LD---GFEEAEAV-TALAKRF--PDARITLDP------------------------NGAWSLDEAVKI-GKQLKG 272 (464)
T ss_dssp -----SC---HHHHHHHH-HHHHHHS--TTCCEEEEC------------------------TTCBCHHHHHHH-HHHTTT
T ss_pred -----CC---HHHHHHHH-HHHHhhC--CCceEEEEC------------------------CCccCHHHHHHH-HHHhhh
Confidence 11 23444445 3344422 578999999 567899999987 456788
Q ss_pred CCeeEEECCCCccCH----HHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHH
Q 013317 295 HPIVSIEDPFDQDDW----EHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMA 370 (445)
Q Consensus 295 ~~i~~iEdP~~~~D~----~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A 370 (445)
+ +.|||||++++|. +.+++|+++++ +||++||+. .++++++++++.+++|++++| +++||||++++++++|
T Consensus 273 ~-l~wiEeP~~~~d~~~~~e~~a~lr~~~~--iPIa~gE~~-~~~~~~~~~i~~~avdi~~~d-~~~GGit~~~kia~lA 347 (464)
T 4g8t_A 273 V-LAYAEDPCGAEQGYSGREIMAEFRRATG--LPTATNMIA-TDWRQMGHTISLQSVDIPLAD-PHFWTMQGSIRVAQMC 347 (464)
T ss_dssp T-CSCEESCBCCBTTBCHHHHHHHHHHHHC--CCEEESSSS-CSHHHHHHHHHHTCCSEEBCC-HHHHCHHHHHHHHHHH
T ss_pred c-cceeecCcCcccccchHHHHHhhhccCC--CCccccccc-cchhhHHHHHHhhCCCEEecc-ccccchHHHHHHHHHH
Confidence 8 9999999999884 78899999999 999999984 679999999999999999999 5899999999999999
Q ss_pred HHcCCcEEecCCCCCChhHH--HHHHHhhh
Q 013317 371 KRAGWGVMASHRSGETEDTF--IADLSVGL 398 (445)
Q Consensus 371 ~~~g~~~~~~~~~~et~~~~--~~~la~a~ 398 (445)
+++|++++ .|.+.++.++. .+||+.++
T Consensus 348 ~~~gi~v~-~h~~~~~~I~laA~~hlaaa~ 376 (464)
T 4g8t_A 348 HEWGLTWG-SHSNNHFDISLAMFTHVAAAA 376 (464)
T ss_dssp HHHTCCCB-CCCCSCCHHHHHHHHHHHTTC
T ss_pred HHcCCEEE-EcCCcccHHHHHHHHHHHHhC
Confidence 99999975 55456776654 45665554
No 110
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=100.00 E-value=8.5e-43 Score=347.56 Aligned_cols=275 Identities=19% Similarity=0.242 Sum_probs=203.7
Q ss_pred CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCC-CCCCHHHHHHHHHHh
Q 013317 18 NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGK-DPTEQTQIDNFMVQQ 96 (445)
Q Consensus 18 ~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~-d~~~~~~i~~~l~~~ 96 (445)
+..++|+| ||+|++|||++.... |++++..++.+.+++ +. |+|+ ||.+++++|+.|. .
T Consensus 26 ~~~~~V~v-td~G~~G~GE~~~~~----------------~~ge~~~~~~~~l~~-~~--l~g~~d~~~~e~~~~~l~-~ 84 (338)
T 3ijl_A 26 TPDVQVEI-EYEGVTGYGEASMPP----------------YLGETVESVMNFLKK-VN--LEQFSDPFQLEDILSYVD-S 84 (338)
T ss_dssp ECEEEEEE-EETTEEEEEEEECCG----------------GGSCCHHHHHHHHTT-CC--CTTCCCTTCHHHHHHHHH-H
T ss_pred eeEEEEEE-EeCCcEEEEeeeCCC----------------CCCCCHHHHHHHHHH-HH--hcCCCCccCHHHHHHHHH-H
Confidence 36799999 999999999543211 335556666555543 22 8999 9999999999998 3
Q ss_pred hccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCCccCCCcccccceeec
Q 013317 97 LDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHADNKLAMQEFMIL 176 (445)
Q Consensus 97 l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~ 176 (445)
.. ....+|++||||||||+.||.+|+|||+||| |. ++++|.+.+++ |. .
T Consensus 85 ~~-----------~~~~~A~said~ALwDl~gk~~g~Pl~~LlG---g~-~~~v~~~~~~~---~~------~------- 133 (338)
T 3ijl_A 85 LS-----------PKDTAAKAAVDIALHDLVGKLLGAPWYKIWG---LN-KEKTPSTTFTI---GI------D------- 133 (338)
T ss_dssp TC-----------SCCHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CC-GGGCCBBCCBC---CC------C-------
T ss_pred hc-----------cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCCcceEEEEE---eC------C-------
Confidence 21 1235799999999999999999999999999 87 56777533321 11 0
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEecccccc
Q 013317 177 PIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 256 (445)
Q Consensus 177 p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~ 256 (445)
.+++..+++.+.. ++|+++ |.|+|. +.+.+.++++|+++ ++.|++|+
T Consensus 134 -~~e~~~~~a~~~~-~g~~~~----K~Kvg~---------------~~d~~~v~avR~~~-------~~~l~vDa----- 180 (338)
T 3ijl_A 134 -TPDVVRAKTKECA-GLFNIL----KVKLGR---------------DNDKEMIETIRSVT-------DLPIAVDA----- 180 (338)
T ss_dssp -CHHHHHHHHHHHH-TTCSSE----EEECSS---------------SCHHHHHHHHHTTC-------CCCEEEEC-----
T ss_pred -CHHHHHHHHHHHH-hcccEE----EEecCc---------------HHHHHHHHHHHhhc-------CCcEEEEC-----
Confidence 0112223332222 145443 445441 12345554444432 36899999
Q ss_pred ccccCcceeecccCCCCCCCCCcC-hHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCH
Q 013317 257 YDRKDKTYDLNFKEENNDGSQKVS-GDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNP 335 (445)
Q Consensus 257 ~~~~~~~y~~~~~~~~~~~n~~~t-~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~ 335 (445)
|+.|| .+++++++ +.+++|++.|||||++++|++++++|+++++ +||++||+. .++
T Consensus 181 -------------------N~~~t~~~~A~~~~-~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~--ipIa~dE~~-~~~ 237 (338)
T 3ijl_A 181 -------------------NQGWKDRQYALDMI-HWLKEKGIVMIEQPMPKEQLDDIAWVTQQSP--LPVFADESL-QRL 237 (338)
T ss_dssp -------------------TTCCCCHHHHHHHH-HHHHHTTEEEEECCSCTTCHHHHHHHHHTCS--SCEEESTTC-CSG
T ss_pred -------------------cCCCCCHHHHHHHH-HHHhhCCCCEEECCCCCCcHHHHHHHHhcCC--CCEEECCCC-CCH
Confidence 57785 99999985 4579999999999999999999999999998 999999985 568
Q ss_pred HHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcc
Q 013317 336 KRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQI 403 (445)
Q Consensus 336 ~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~ 403 (445)
+++++++ +++|++|+|++++||||++++++++|+++|+++++++ +.|+.++..+.++++...++.
T Consensus 238 ~~~~~~~--~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~~la~~~~~~ 302 (338)
T 3ijl_A 238 GDVAALK--GAFTGINIKLMKCTGMREAWKMVTLAHALGMRVMVGC-MTETSCAISAASQFSPAVDFA 302 (338)
T ss_dssp GGTGGGB--TTBSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHHTTGGGCSEE
T ss_pred HHHHHHH--hhCCEEEecccccCCHHHHHHHHHHHHHcCCEEEecC-CcccHHHHHHHHHHhccCCcc
Confidence 9998885 8999999999999999999999999999999998766 578888776666666555554
No 111
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=1.7e-41 Score=344.28 Aligned_cols=294 Identities=16% Similarity=0.156 Sum_probs=205.0
Q ss_pred CcceeEEEEEEEe--------cC--CCC-----CeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHH
Q 013317 1 MVTINAVKARQIF--------DS--RGN-----PTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLK 65 (445)
Q Consensus 1 ~~~I~~v~~~~i~--------~~--~g~-----~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~ 65 (445)
+|||++|+++.+. ++ .|. ..++|+|+|| |++|||++... .
T Consensus 11 ~mkI~~i~~~~v~~pl~~~f~~s~~~g~~~~~~~~~~V~i~td-G~~G~GE~~~~----------------------~-- 65 (392)
T 3v5c_A 11 DWKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQTGYGSSIHM----------------------T-- 65 (392)
T ss_dssp TCBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEEEEEECCSC----------------------C--
T ss_pred CcEEEEEEEEEEeeecCcccccccccCccCCCceeEEEEEEEc-CCEEEEeecCc----------------------H--
Confidence 3799999998772 22 442 4689999999 99999876531 0
Q ss_pred HHHHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q 013317 66 AVQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGN 145 (445)
Q Consensus 66 a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~ 145 (445)
+.++|.|+|+||.++. .. ++.+..+|++|||+||||+.||.+|+|||+||| |+
T Consensus 66 ------~~l~~~liG~d~~~~~--------~~----------~~~~~~~A~aaiD~ALwDl~gK~~g~Pv~~LLG---G~ 118 (392)
T 3v5c_A 66 ------PEWAEDVIGRRLLDLF--------DD----------RGRLREAYRLQLEYPVLDWLGQRQGKPVYDLVS---GA 118 (392)
T ss_dssp ------HHHHHTTTTCBGGGGB--------CT----------TSCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHS---CC
T ss_pred ------HHHHHHhCCCCHHHHH--------hh----------ccchHHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CC
Confidence 2467999999996531 11 123446799999999999999999999999999 98
Q ss_pred Ccce---eeeeeEEeecCCccCCCcccccceeecc-CCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCC
Q 013317 146 KTLV---LPVPAFNVINGGSHADNKLAMQEFMILP-IGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPN 221 (445)
Q Consensus 146 ~~~~---ip~p~~~~~~gg~~~~~~~~~~e~~~~p-~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~ 221 (445)
.++. +++|+|++.. +... ....+ -| ..++..+++.+...+||+++ |+|+|. .+.+.+.
T Consensus 119 ~r~~~~~v~v~~y~~~~-~~~~---~~~~~---~~~~~e~~~~~a~~~~~~Gf~~~----KlKvg~-------~~~~~~~ 180 (392)
T 3v5c_A 119 HLETGASLVVPCYDTSL-YFDD---LHLAD---ERAAVALMQEEAMQGYAKGQRHF----KIKVGR-------GGRHMPL 180 (392)
T ss_dssp CSCCCCCEEEEEEEEEE-CBTT---TTCCC---HHHHHHHHHHHHHHHHHTTCCCE----EEECCT-------TTTTSCH
T ss_pred CCcccccceEEEEEeec-cccc---ccccc---cccCHHHHHHHHHHHHHCCCCEE----EECCCC-------CCccccc
Confidence 7766 3345565321 1100 00000 00 00122445555555666655 345442 1222211
Q ss_pred ccCchHHHHHHHHHHHh-cCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEE
Q 013317 222 IQESYEGFELLKTAIAK-GGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSI 300 (445)
Q Consensus 222 ~~~~~~~l~~v~~ai~~-~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~i 300 (445)
.....+.++.+ +++|+ +| +++.|++|+ |+.||.+++++++ +.+++|++.||
T Consensus 181 ~~~~~~d~~~v-~avR~a~g--~~~~l~vDa------------------------N~~w~~~~A~~~~-~~L~~~~l~~i 232 (392)
T 3v5c_A 181 WEGTKRDIAIV-RGISEVAG--PAGKIMIDA------------------------NNAYNLNLTKEVL-AALSDVNLYWL 232 (392)
T ss_dssp HHHHHHHHHHH-HHHHHHHC--TTCCEEEEC------------------------TTCCCHHHHHHHH-HHTTTSCCCEE
T ss_pred cccHHHHHHHH-HHHHHHcC--CCCcEEeeC------------------------CCCcCHHHHHHHH-HhcccCCCeEE
Confidence 11123344444 33443 46 689999999 5778999999985 45799999999
Q ss_pred ECCCCccCHHHHHHHHHHh---CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcE
Q 013317 301 EDPFDQDDWEHYAELTGKI---GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGV 377 (445)
Q Consensus 301 EdP~~~~D~~~~~~L~~~~---~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~ 377 (445)
|||++ +|++++++|++++ ..++||++||+. . .++++++++.+++|++|+|+++ ||||++++++++|+++|+++
T Consensus 233 EeP~~-~d~~~~~~l~~~~~~~~~~ipIa~gE~~-~-~~~~~~li~~~a~dii~~d~~~-GGitea~kia~~A~~~gv~~ 308 (392)
T 3v5c_A 233 EAAFH-EDEALYEDLKEWLGQRGQNVLIADGEGL-A-SPHLIEWATRGRVDVLQYDIIW-PGFTHWMELGEKLDAHGLRS 308 (392)
T ss_dssp ECSSS-CCHHHHHHHHHHHHHHTCCCEEEECCSS-C-CTTHHHHHHTTSCCEECCBTTT-BCHHHHHHHHHHHHHTTCEE
T ss_pred eCCCC-cCHHHHHHHHHhhccCCCCCcEECCCcc-c-HHHHHHHHHcCCCcEEEeCCCC-CCHHHHHHHHHHHHHcCCeE
Confidence 99998 7899999999873 123999999985 5 7899999999999999999999 99999999999999999998
Q ss_pred EecCCCCCChhHH--HHHHHhhh
Q 013317 378 MASHRSGETEDTF--IADLSVGL 398 (445)
Q Consensus 378 ~~~~~~~et~~~~--~~~la~a~ 398 (445)
++++ + ++.++. .+||+.++
T Consensus 309 ~~h~-~-~s~i~~aa~~hlaaa~ 329 (392)
T 3v5c_A 309 APHC-Y-GNAYGIYASGHLSAAV 329 (392)
T ss_dssp CCBC-C-SCTHHHHHHHHHGGGC
T ss_pred EecC-C-CcHHHHHHHHHHHHhC
Confidence 6544 3 676654 45555543
No 112
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=5.8e-42 Score=348.39 Aligned_cols=294 Identities=15% Similarity=0.137 Sum_probs=211.8
Q ss_pred cceeEEEEEEEe--------cC--CC-----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHH
Q 013317 2 VTINAVKARQIF--------DS--RG-----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKA 66 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~--~g-----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a 66 (445)
|||++|+++.+. .+ .+ +++++|+|+|+ |++|||+++ +
T Consensus 12 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~V~v~td-G~~G~GE~~-g-------------------------- 63 (392)
T 3p3b_A 12 WKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQTGYGSSI-H-------------------------- 63 (392)
T ss_dssp CBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEEEEEECC-S--------------------------
T ss_pred CeEEEEEEEEEeccCCCcccccccccccCCCCcEEEEEEEEC-CCEEEEecc-c--------------------------
Confidence 799999998762 22 22 45799999999 999998654 1
Q ss_pred HHHHHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhC--
Q 013317 67 VQNVNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAG-- 144 (445)
Q Consensus 67 ~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G-- 144 (445)
.|+ .++|.|+|+||.+++.+| . ++..+|++|||+||||+.||.+|+|||+||| |
T Consensus 64 --~i~-~l~p~l~G~d~~~~~~~~---~---------------~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~ 119 (392)
T 3p3b_A 64 --MTP-EWAEDVIGRRLLDLFDDR---G---------------RLREAYRLQLEYPVLDWLGQRQGKPVYDLVS---GAH 119 (392)
T ss_dssp --CCH-HHHHTTTTCBGGGGBCTT---S---------------CBCGGGHHHHHHHHHHHHHHHHTCBHHHHHC------
T ss_pred --HHH-HHHHHhcCCCHHHHHHHH---h---------------HHHHHHHHHHHHHHHHHHHHHcCCcHHHHhc---Ccc
Confidence 134 578999999998887654 1 1235799999999999999999999999999 8
Q ss_pred --CC-cceeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCC
Q 013317 145 --NK-TLVLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPN 221 (445)
Q Consensus 145 --~~-~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~ 221 (445)
.. ++++|++......|+.+..+.+++++ ...+++.+...+||+.+| .|.| ..++|.++
T Consensus 120 ~~~~~~~~vp~~~s~~~~~~~~~~~~~~~~e--------~~~~~a~~~~~~Gf~~vK----ik~g-------~~~~~~~~ 180 (392)
T 3p3b_A 120 LETGASLVVPCYDTSLYFDDLHLADERAAVA--------LMQEEAMQGYAKGQRHFK----IKVG-------RGGRHMPL 180 (392)
T ss_dssp -----CEEEEEEEEEECBTTTTCCSHHHHHH--------HHHHHHHHHHHTTCCCEE----EECC-------HHHHTSCH
T ss_pred ccccccCCcceeEeecccCCCCcccccchHH--------HHHHHHHHHHHhCCCEEE----ECcC-------cCcccCCc
Confidence 54 66777643101112111001111112 223455555555665443 3333 22223221
Q ss_pred ccCchHHHHHHHHHHHh-cCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEE
Q 013317 222 IQESYEGFELLKTAIAK-GGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSI 300 (445)
Q Consensus 222 ~~~~~~~l~~v~~ai~~-~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~i 300 (445)
.+.....++.++ ++|+ +| +++.|++|+ |++||.+++++++. .+++|++.||
T Consensus 181 ~~~~~~~~e~v~-avR~~~g--~d~~l~vDa------------------------n~~~~~~~ai~~~~-~l~~~~i~~i 232 (392)
T 3p3b_A 181 WEGTKRDIAIVR-GISEVAG--PAGKIMIDA------------------------NNAYNLNLTKEVLA-ALSDVNLYWL 232 (392)
T ss_dssp HHHHHHHHHHHH-HHHHHHC--TTCCEEEEC------------------------TTCCCHHHHHHHHH-HTTTSCEEEE
T ss_pred cccHHHHHHHHH-HHHHHhC--CCCeEEEEC------------------------CCCCCHHHHHHHHH-HHHhcCCCEE
Confidence 112234455553 3333 56 579999999 46688999999855 5899999999
Q ss_pred ECCCCccCHHHHHHHHHH-----hCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCC
Q 013317 301 EDPFDQDDWEHYAELTGK-----IGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGW 375 (445)
Q Consensus 301 EdP~~~~D~~~~~~L~~~-----~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~ 375 (445)
|||++ +|++++++|+++ ++ +||++|| . +++++++++++.+++|++++|++++ |+|++++++++|+++|+
T Consensus 233 E~P~~-~d~~~~~~l~~~l~~~g~~--iPIa~dE-~-~~~~~~~~~i~~~~~d~v~ik~~~~-Git~~~~i~~~A~~~gi 306 (392)
T 3p3b_A 233 EEAFH-EDEALYEDLKEWLGQRGQN--VLIADGE-G-LASPHLIEWATRGRVDVLQYDIIWP-GFTHWMELGEKLDAHGL 306 (392)
T ss_dssp ECSSS-CCHHHHHHHHHHHHHHTCC--CEEEECC-S-SCCTTHHHHHHTTSCCEECCBTTTB-CHHHHHHHHHHHHHTTC
T ss_pred ecCCc-ccHHHHHHHHHhhccCCCC--ccEEecC-C-CCHHHHHHHHHcCCCCEEEeCcccc-CHHHHHHHHHHHHHcCC
Confidence 99999 999999999999 77 9999999 5 6799999999999999999999999 99999999999999999
Q ss_pred cEEecCCCCCChhHHHHHHHhhhcCCc
Q 013317 376 GVMASHRSGETEDTFIADLSVGLATGQ 402 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~ 402 (445)
++++ | +.||.++.+++++++...+.
T Consensus 307 ~~~~-h-~~es~i~~~a~l~laa~~~~ 331 (392)
T 3p3b_A 307 RSAP-H-CYGNAYGIYASGHLSAAVRN 331 (392)
T ss_dssp EECC-B-CCSCTHHHHHHHHHGGGCTT
T ss_pred EEEe-c-CCCCHHHHHHHHHHHHhCCC
Confidence 9876 6 68999888777777655443
No 113
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=100.00 E-value=8.6e-41 Score=339.52 Aligned_cols=292 Identities=14% Similarity=0.116 Sum_probs=211.7
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +++++|+|+||+|++|||+++.. |.. .|. ..++...
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~---g~~----------~~~---~~~~~~~ 66 (389)
T 2oz8_A 3 LSLSHFRITRFQFARDRVIGDSQVRADDVNVAALELVSESGEVGLGFIQTL---FNP----------LPD---QQEIESV 66 (389)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEEES---SSC----------CCC---HHHHHHH
T ss_pred CEEEEEEEEEEEeccCCceecccceecccceEEEEEEECCCCEEEEEeccC---CCc----------ccc---HHHHHHH
Confidence 799999998772 3443 25699999999999999965431 110 122 2455666
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccc-cccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWC-KQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTL 148 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~-~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~ 148 (445)
|++.++|.|+|+|+.++ +. .+++... + .+.+..+|++|||+||||+.||.+|+|||+||| |. ++
T Consensus 67 i~~~l~p~l~G~d~~~~------~~-~~~~~~~----~~~~~l~~~a~~aid~AlwDl~~k~~g~Pl~~lLG---g~-~~ 131 (389)
T 2oz8_A 67 FEHEVWPSLKGNRAIAL------VH-RVNRPRG----GNQRAYSLPFHEAVQVALWDLAAKEAGLPLHVLLG---SR-RN 131 (389)
T ss_dssp HHHHTHHHHTTSCHHHH------TT-CCCCCC----------CCSCCHHHHHHHHHHHHHHHHTSBHHHHTT---CS-CS
T ss_pred HHHHHHHHHcCCCHHHH------HH-HHhccCC----CccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CC-CC
Confidence 78889999999998666 22 2221000 0 011256899999999999999999999999999 86 45
Q ss_pred eeeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHH
Q 013317 149 VLPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEG 228 (445)
Q Consensus 149 ~ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 228 (445)
++| +|++ +|.+. .+. ++..+++.+...+||+.+| .|+|. .+ ....
T Consensus 132 ~vp--~y~~--~~~~~---~~~---------~~~~~~a~~~~~~Gf~~vK----ik~g~------------~~---~~~~ 176 (389)
T 2oz8_A 132 RVK--AYAS--GLDFH---LDD---------DAFVSLFSHAASIGYSAFK----IKVGH------------RD---FDRD 176 (389)
T ss_dssp EEE--EEEE--CCBTT---CCH---------HHHHHHHHHHHHTTCCEEE----EECCC------------SS---HHHH
T ss_pred ceE--EEEe--CCCcC---CCH---------HHHHHHHHHHHHhCCCEEE----EccCC------------CC---HHHH
Confidence 555 4654 23210 111 2234555555555665543 44431 11 2334
Q ss_pred HHHHHHHHHh-cCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhc--CCeeEEECCCC
Q 013317 229 FELLKTAIAK-GGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD--HPIVSIEDPFD 305 (445)
Q Consensus 229 l~~v~~ai~~-~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~--~~i~~iEdP~~ 305 (445)
++.+ +++|+ +| +++.|++|+ |++||.+++++++. .+++ +++.|||||++
T Consensus 177 ~e~v-~avR~a~G--~~~~l~vDa------------------------n~~~~~~~a~~~~~-~l~~~g~~i~~iEqP~~ 228 (389)
T 2oz8_A 177 LRRL-ELLKTCVP--AGSKVMIDP------------------------NEAWTSKEALTKLV-AIREAGHDLLWVEDPIL 228 (389)
T ss_dssp HHHH-HHHHTTSC--TTCEEEEEC------------------------TTCBCHHHHHHHHH-HHHHTTCCCSEEESCBC
T ss_pred HHHH-HHHHHhhC--CCCeEEEEC------------------------CCCCCHHHHHHHHH-HHHhcCCCceEEeCCCC
Confidence 4555 34444 55 579999999 46688899999864 5888 99999999999
Q ss_pred ccCHHHHHHHHHHh-CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCC
Q 013317 306 QDDWEHYAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSG 384 (445)
Q Consensus 306 ~~D~~~~~~L~~~~-~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~ 384 (445)
++|++++++|++++ + +||++||+. ++++++++++.+++|++++| ||||++++++++|+++|++++++|.+.
T Consensus 229 ~~~~~~~~~l~~~~~~--iPIa~dE~~--~~~~~~~~i~~~~~d~v~ik----GGit~a~~i~~~A~~~gi~~~~~~~~~ 300 (389)
T 2oz8_A 229 RHDHDGLRTLRHAVTW--TQINSGEYL--DLQGKRLLLEAHAADILNVH----GQVTDVMRIGWLAAELGIPISIGNTFL 300 (389)
T ss_dssp TTCHHHHHHHHHHCCS--SEEEECTTC--CHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHHHHHTCCEEECCCGG
T ss_pred CcCHHHHHHHHhhCCC--CCEEeCCCC--CHHHHHHHHHcCCCCEEEEC----cCHHHHHHHHHHHHHcCCeEeecccHH
Confidence 99999999999998 7 999999985 79999999999999999999 999999999999999999998884333
Q ss_pred CChhHHHHHHHhhhc
Q 013317 385 ETEDTFIADLSVGLA 399 (445)
Q Consensus 385 et~~~~~~~la~a~~ 399 (445)
| +.+|++.++.
T Consensus 301 e----a~lhlaaa~~ 311 (389)
T 2oz8_A 301 E----AGVHMAVALP 311 (389)
T ss_dssp G----TTHHHHHHST
T ss_pred H----HHHHHHhcCC
Confidence 4 5678877754
No 114
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=100.00 E-value=2.6e-40 Score=330.44 Aligned_cols=275 Identities=11% Similarity=0.073 Sum_probs=205.8
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
|||++|+++.+. .+.+ +..++|+|+||+|++|||++.... .++|++++..++...
T Consensus 2 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-------------~~~~~~e~~~~~~~~ 68 (342)
T 2okt_A 2 LKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGECNAFQ-------------TDWYDHETIASVKHV 68 (342)
T ss_dssp BCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTCCEEEEECCCBS-------------STTSCSCBHHHHHHH
T ss_pred cEEEEEEEEEEeecccCCeecccEEEEeeeEEEEEEEECCCCEEEEEecCCC-------------CCcCCCCCHHHHHHH
Confidence 799999998762 2333 246899999999999999654311 123667777777777
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+++.+ |.|+|+||.+++.+|+.|. ...+ ..+|++|||+||||+.||.+|+ +
T Consensus 69 l~~~~-~~l~G~d~~~~~~l~~~l~-~~~g------------~~~a~said~ALwDl~gk~~g~---------------~ 119 (342)
T 2okt_A 69 IEQWF-EDNRNKSFETYEAALKLVD-SLEN------------TPAARATIVMALYQMFHVLPSF---------------S 119 (342)
T ss_dssp HHHHH-HHHTTCCBCSHHHHHHTTG-GGTT------------CHHHHHHHHHHHHHTTCCCCCE---------------E
T ss_pred HHHHH-HHHcCCCcCCHHHHHHHHH-Hhhc------------ChHHHHHHHHHHHHHhhhhhCc---------------e
Confidence 87767 9999999999999998886 3311 2479999999999999999886 3
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|+ |.+++|. + . ++..+...+||+++ |.|+| + + +.+++
T Consensus 120 v~~--~~~~~g~-------~------------~-e~~~~~~~~G~~~~----KiKvg-------------~--~-d~~~v 157 (342)
T 2okt_A 120 VAY--GATASGL-------S------------N-KQLESLKATKPTRI----KLKWT-------------P--Q-IMHQI 157 (342)
T ss_dssp EEC--EEEESSC-------C------------H-HHHHHHHHHCCSEE----EEECC-------------T--T-HHHHH
T ss_pred Eee--eEEEecC-------C------------H-HHHHHHHHcCCcEE----EEEeC-------------H--H-HHHHH
Confidence 444 5443221 0 0 11122233456544 33432 1 2 34444
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCH
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~ 309 (445)
++ +|++ + +++.|+||+ |+.||.+++ +++ +.+++|++.|||||++++|+
T Consensus 158 ~a----vr~~-~-~~~~l~vDa------------------------N~~~~~~~A-~~~-~~l~~~~i~~iEqP~~~~d~ 205 (342)
T 2okt_A 158 RV----LREL-D-FHFQLVIDA------------------------NESLDRQDF-TQL-QLLAREQVLYIEEPFKDISM 205 (342)
T ss_dssp HH----HTTS-S-SCCEEEEEC------------------------TTCCCGGGH-HHH-HHHGGGCEEEEECCCSSGGG
T ss_pred HH----HHHh-C-CCCeEEEEC------------------------CCCCCHHHH-HHH-HHHhhCCCcEEECCCCCccH
Confidence 44 4443 2 679999999 467888899 875 55899999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhH
Q 013317 310 EHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++ ++++ +||++||+ +.++++++++++.+++|++|+|++++||||++++++++|+++|++++++++ .|+.++
T Consensus 206 ~~~~~--~~~~--ipIa~dEs-~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es~i~ 279 (342)
T 2okt_A 206 LDEVA--DGTI--PPIALDEK-ATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGM-YEYGLS 279 (342)
T ss_dssp GGGSC--TTSS--CCEEESTT-CCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBCS-SCCHHH
T ss_pred HHHHH--hcCC--CCEEecCC-CCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcCC-cccHHH
Confidence 99988 5566 99999998 467999999999999999999999999999999999999999999987774 688777
Q ss_pred HHHHHHhhh
Q 013317 390 FIADLSVGL 398 (445)
Q Consensus 390 ~~~~la~a~ 398 (445)
..+.++++.
T Consensus 280 ~aa~~hlaa 288 (342)
T 2okt_A 280 RYFTAMLAR 288 (342)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 555544443
No 115
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.9e-39 Score=321.78 Aligned_cols=281 Identities=16% Similarity=0.175 Sum_probs=202.8
Q ss_pred ceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHH
Q 013317 3 TINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNV 70 (445)
Q Consensus 3 ~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i 70 (445)
+|++|+++.+. .+.+ +..++|+|+ ++|++|||++.... +++++.......+
T Consensus 3 ~i~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~~G~GE~~~~~----------------~~g~~~~~~~~~i 65 (324)
T 1jpd_X 3 HMRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELE-EEGIKGTGECTPYP----------------RYGESDASVMAQI 65 (324)
T ss_dssp SCCEEEEEEEEEEBSCC------CCSEEEEEEEEEE-ETTEEEEEEECCCG----------------GGTCCHHHHHHHH
T ss_pred ceEEEEEEEEEecccccEEecCeeEEEeeEEEEEEE-eCCceEEEEeeCCC----------------CcCCCHHHHHHHH
Confidence 57788877662 2333 246999998 78999999653211 1133444555555
Q ss_pred HHhHhhhcc-CCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 71 NSIIGPALV-GKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 71 ~~~l~p~Li-G~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+ .+.|.|+ |+| ++.+++.+ . ..+|++|||+||||+.||.+|+|||+||| |..+ +
T Consensus 66 ~-~~~~~l~~~~~---~~~~~~~~-----~------------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~-~ 120 (324)
T 1jpd_X 66 M-SVVPQLEKGLT---REELQKIL-----P------------AGAARNALDCALWDLAARRQQQSLADLIG---ITLP-E 120 (324)
T ss_dssp H-TTHHHHHTTCC---HHHHHHHS-----C------------SSHHHHHHHHHHHHHHHHTTTCCHHHHHT---CCCC-S
T ss_pred H-HHHHHHhcCCC---HHHHHHhC-----c------------cHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCC-C
Confidence 5 4778774 554 45553321 1 13799999999999999999999999999 8653 4
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
.|+|.|++ +++ +. +..++++.+...+||+++| .|+|. +.+.+.+
T Consensus 121 ~~~~~~~~-~~~-------~~---------e~~~~~a~~~~~~G~~~~K----iKvg~---------------~~d~~~v 164 (324)
T 1jpd_X 121 TVITAQTV-VIG-------TP---------DQMANSASTLWQAGAKLLK----VKLDN---------------HLISERM 164 (324)
T ss_dssp EEEBCEEE-CSC-------CH---------HHHHHHHHHHHHTTCSEEE----EECCS---------------SCHHHHH
T ss_pred CcceeEEe-eCC-------CH---------HHHHHHHHHHHHcCCCEEE----EEeCC---------------chHHHHH
Confidence 56666764 222 11 2234566666666776653 45441 1235555
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCH
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~ 309 (445)
+++|+++ +++.|++|+ |+.||.+++++++ +.+++|++.|||||++++|+
T Consensus 165 ~avr~~~------~~~~l~vDa------------------------N~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~ 213 (324)
T 1jpd_X 165 VAIRTAV------PDATLIVDA------------------------NESWRAEGLAARC-QLLADLGVAMLEQPLPAQDD 213 (324)
T ss_dssp HHHHHHC------TTSEEEEEC------------------------TTCCCSTTHHHHH-HHHHHTTCCEEECCSCTTSC
T ss_pred HHHHHhC------CCCEEEEEC------------------------cCCCCHHHHHHHH-HHHHhCCCCEEECCCCCCCH
Confidence 5555443 579999999 4567788999875 56899999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhH
Q 013317 310 EHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+ ++ +||++||+. +++++++++++. +|++|||++++||+|++++++++|+++|++++++| +.|+.++
T Consensus 214 ~~~~~l~--~~--ipIa~dE~~-~~~~~~~~~~~~--~~~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~ 285 (324)
T 1jpd_X 214 AALENFI--HP--LPICADESC-HTRSNLKALKGR--YEMVNIKLDKTGGLTEALALATEARAQGFSLMLGC-MLCTSRA 285 (324)
T ss_dssp GGGGSSC--CS--SCEEESTTC-SSGGGHHHHBTT--BSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHH
T ss_pred HHHHhcc--CC--CCEEEcCCC-CCHHHHHHHHhh--CCEEEEcchhhCcHHHHHHHHHHHHHcCCcEEEeC-cchHHHH
Confidence 9999885 44 999999985 779999999854 89999999999999999999999999999998877 4788887
Q ss_pred HHHHHHhhhcC
Q 013317 390 FIADLSVGLAT 400 (445)
Q Consensus 390 ~~~~la~a~~~ 400 (445)
..+.++++...
T Consensus 286 ~aa~~~la~~~ 296 (324)
T 1jpd_X 286 ISAALPLVPQV 296 (324)
T ss_dssp HHHHGGGGGGC
T ss_pred HHHHHHHhhcC
Confidence 76666665433
No 116
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=100.00 E-value=7.5e-36 Score=296.65 Aligned_cols=272 Identities=15% Similarity=0.144 Sum_probs=190.4
Q ss_pred cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCCCCCCHHHH
Q 013317 14 DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGKDPTEQTQI 89 (445)
Q Consensus 14 ~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~~~i 89 (445)
.|+| ..+|+|+|+ |+|++|||++...+ +++++.+++...++....+.+.|.+. +.+
T Consensus 22 is~g~~t~~~~v~V~i~-d~G~~G~GE~~p~~----------------~~get~e~~~~~l~~~~~~~~~~~~~---~~~ 81 (329)
T 4gfi_A 22 ISRGTRTHADVVTCTIR-DGSFTGIGECVPYP----------------RYGESIEGVTADIEAMADRVAAGLTR---QEL 81 (329)
T ss_dssp ETTEEEEEEEEEEEEEE-ETTEEEEEEECCCG----------------GGTCCHHHHHHHHHTTHHHHHHTCCH---HHH
T ss_pred ccCeEEEEeEEEEEEEE-ECCEEEEEeccCCC----------------CCCcCHHHHHHHHHHHhhhhccccch---hhH
Confidence 4665 356899995 88999999543211 23566777777777666666666543 221
Q ss_pred HHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCCccCCCccc
Q 013317 90 DNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHADNKLA 169 (445)
Q Consensus 90 ~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg~~~~~~~~ 169 (445)
. ...+ ..+|++|||+||||+.||..|+|+|++|| |..++.+|+ +.++..+.
T Consensus 82 ----~-~~~~------------~~~a~aaid~AlwDl~gk~~g~pl~~llg---G~~~~~v~~--~~~~~~~~------- 132 (329)
T 4gfi_A 82 ----Q-QVMK------------PGAARNAVDCALWDLEAKMSGKRAAEQVL---GQPAQPLVT--AYTISLAD------- 132 (329)
T ss_dssp ----H-HHSC------------SSHHHHHHHHHHHHHHHHHHSCCHHHHHH---SSCCCCEEC--CEEECCCC-------
T ss_pred ----H-hhcc------------cHHHHHHHHHHHHHHHhhhcCCChhHHhC---CCCCCceee--eecccCCC-------
Confidence 1 1111 13699999999999999999999999999 988777766 33332110
Q ss_pred ccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEE
Q 013317 170 MQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGM 249 (445)
Q Consensus 170 ~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~v 249 (445)
. +....++.+ ..+|+ .+|.|.| . .++.+.++.+| ++| +++.|+|
T Consensus 133 ~---------~~~~~~~~~--~~~~~----~~Kik~g-------~--------~~d~~~v~~vr----~~g--~d~~l~v 176 (329)
T 4gfi_A 133 P---------DTMAAKTAE--NAGRP----LLKIKTG-------T--------ADDEARLRAVR----AAA--PEARIII 176 (329)
T ss_dssp H---------HHHHHHHHH--TTTSS----EEEEECC-------S--------SCCHHHHHHHH----HHC--TTSEEEE
T ss_pred h---------HHHHHHHHh--hcccc----EEEecCC-------c--------ccHHHHHHHHH----Hhc--cCCeEEE
Confidence 0 011111111 01121 1223322 1 23456665554 445 6899999
Q ss_pred eccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEecc
Q 013317 250 DVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDD 329 (445)
Q Consensus 250 D~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde 329 (445)
|+ |++||.+++++++ +.++++++.|||||++++|.+++. +.+.+ +||++||
T Consensus 177 Da------------------------N~~w~~~~A~~~~-~~l~~~~i~~iEqP~~~~~~~~~~--~~~~~--ipia~dE 227 (329)
T 4gfi_A 177 DA------------------------NEGWNDDNIEYYL-KLAAELKISLIEQPLPAGKDAMLA--RIEHP--VLICADE 227 (329)
T ss_dssp EC------------------------TTCCCTTTHHHHH-HHHHHTTCCEEECCSCTTSCGGGG--GSCCS--SEEEEST
T ss_pred Ec------------------------CCCCCHHHHHHHH-HhhhhcCceEEEecCCCccHHHHH--HhcCC--CCchhcc
Confidence 99 5678889999875 567999999999999999877654 33444 9999999
Q ss_pred ccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcc
Q 013317 330 LLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQI 403 (445)
Q Consensus 330 ~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~ 403 (445)
+. .+++++.+. .+++|++|||++++||||++++++++|+++|++++++| +.||.++..+.++++...+++
T Consensus 228 s~-~~~~d~~~~--~~a~d~i~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i~~aa~~~la~~~~~~ 297 (329)
T 4gfi_A 228 SV-HSTEDLAGL--RDRYDAINIKLDKTGGLTEALVMKAEAERLGFTIMVGC-MLGTSLGMAPAVLVAQGTAFA 297 (329)
T ss_dssp TC-CTGGGSGGG--TTTCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHHHHTTTCSEE
T ss_pred CC-CCHHHHHHH--hhccCeEEecCceeCCHHHHHHHHHHHHHCCCEEEECC-cchhHHHHHHHHHHHhCCCee
Confidence 85 568888765 57899999999999999999999999999999998877 478888877777776666654
No 117
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=100.00 E-value=5.5e-36 Score=296.61 Aligned_cols=267 Identities=15% Similarity=0.137 Sum_probs=193.0
Q ss_pred cceeEEEEEEEe--------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHH
Q 013317 2 VTINAVKARQIF--------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQN 69 (445)
Q Consensus 2 ~~I~~v~~~~i~--------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~ 69 (445)
.+|++|+.+.+. .+.+ +..++|+|+|| |++|||++... +.|++++..++...
T Consensus 1 ~~I~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td-G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 64 (322)
T 1r6w_A 1 SHMRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREG-EREGWGEISPL---------------PGFSQETWEEAQSV 64 (322)
T ss_dssp CCCEEEEEEEEEEEBCTTCBC-CCBCCEEEEEEEEEEET-TEEEEEEECCC---------------TTTCSSCHHHHHHH
T ss_pred CcceEEEEEEEEEeccCCeEeccEEEEeeeEEEEEEEEC-CeEEEEEecCC---------------CCCCccCHHHHHHH
Confidence 378999988773 2333 35699999997 99999964321 12556677777777
Q ss_pred HHHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcce
Q 013317 70 VNSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLV 149 (445)
Q Consensus 70 i~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ 149 (445)
+++.+.|.|+|+ .+ +++ ...|++|||+||||+.||..|+|+| +.
T Consensus 65 l~~~~~~~l~g~--~~-----------l~~------------~~~a~~aid~ALwDl~gk~~g~p~~-----------~~ 108 (322)
T 1r6w_A 65 LLAWVNNWLAGD--CE-----------LPQ------------MPSVAFGVSCALAELTDTLPQAANY-----------RA 108 (322)
T ss_dssp HHHHHHHHTTSC--CC-----------CCS------------SHHHHHHHHHHHHHHTTCSCCCSCC-----------CC
T ss_pred HHHHHHHhhCCh--hh-----------ccc------------ChHHHHHHHHHHHHhcCCCCCCCcc-----------ce
Confidence 888899999998 21 111 1369999999999999999998875 13
Q ss_pred eeeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHH
Q 013317 150 LPVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGF 229 (445)
Q Consensus 150 ip~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 229 (445)
+|+ | .+ +. ++.++++.+. +||+++ |.|+|. .+.+.+.+.+
T Consensus 109 v~~--~----~~-------~~---------~~~~~~a~~~--~G~~~~----KiKvG~------------~~~~~d~~~v 148 (322)
T 1r6w_A 109 APL--C----NG-------DP---------DDLILKLADM--PGEKVA----KVRVGL------------YEAVRDGMVV 148 (322)
T ss_dssp CCE--E----CS-------CH---------HHHHHHHHTC--CSSEEE----EEECSS------------SCHHHHHHHH
T ss_pred EEE--e----CC-------CH---------HHHHHHHHHh--CCCceE----EEEeCC------------CCHHHHHHHH
Confidence 444 2 01 00 1122232221 355544 345441 1223334445
Q ss_pred HHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcC---CeeEEECCCCc
Q 013317 230 ELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH---PIVSIEDPFDQ 306 (445)
Q Consensus 230 ~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~---~i~~iEdP~~~ 306 (445)
+++|+++ +++.|++|+ |+.||.+++++++ +.+++| ++.|||||++
T Consensus 149 ~avr~~~------~~~~l~vDa------------------------N~~~~~~~A~~~~-~~l~~~~~~~i~~iEqP~~- 196 (322)
T 1r6w_A 149 NLLLEAI------PDLHLRLDA------------------------NRAWTPLKGQQFA-KYVNPDYRDRIAFLEEPCK- 196 (322)
T ss_dssp HHHHHHC------TTEEEEEEC------------------------TTCBCHHHHHHHH-HTSCTTTGGGEEEEECCBS-
T ss_pred HHHHHhC------CCCeEEEeC------------------------CCCCCHHHHHHHH-HHhhhhccCCeeEEECCCC-
Confidence 4444432 579999999 5678999999985 567888 9999999997
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
++++|++|+++++ +||++||++. +. ++ ++++.+++|++|+|++++||+|++++++++|+++|++++++|+ .|+
T Consensus 197 -~~~~~~~l~~~~~--ipIa~dE~~~-~~-~~-~~~~~~a~d~i~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es 269 (322)
T 1r6w_A 197 -TRDDSRAFARETG--IAIAWDESLR-EP-DF-AFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSS-IES 269 (322)
T ss_dssp -SHHHHHHHHHHHC--CCEEESGGGG-ST-TC-CCCCCTTEEEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEBCS-SCC
T ss_pred -ChHHHHHHHHhCC--CCEEeCCCCC-Ch-hH-hhhhcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCcEEEECc-ccc
Confidence 4889999999998 9999999964 44 46 6778999999999999999999999999999999999988885 588
Q ss_pred hhH--HHHHHHhhhc
Q 013317 387 EDT--FIADLSVGLA 399 (445)
Q Consensus 387 ~~~--~~~~la~a~~ 399 (445)
.++ +.+||+.++.
T Consensus 270 ~ig~aa~~hlaa~~~ 284 (322)
T 1r6w_A 270 SLGLTQLARIAAWLT 284 (322)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 765 5667776654
No 118
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=100.00 E-value=1.4e-35 Score=294.74 Aligned_cols=283 Identities=13% Similarity=0.080 Sum_probs=194.2
Q ss_pred CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHhh
Q 013317 18 NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNVNSIIGPALVGKDPTEQTQIDNFMVQQL 97 (445)
Q Consensus 18 ~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~l 97 (445)
+..++|+|+||+|++|||++... +.|.++++.+++..+ +.|.|.| ||.+++.+|+.|
T Consensus 28 ~~~~lV~v~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~~~-~~l~~~l---~~~~~~~~~~~~---- 84 (332)
T 2ozt_A 28 RSGIYLRLEDEQGQVGYGEIAPL---------------PGWGSETLNADIALC-QQLPGHL---TPEIMATIPEAL---- 84 (332)
T ss_dssp EEEEEEEEECTTSCEEEEEECCC---------------TTSSSCCHHHHHHHH-HHSCSEE---CHHHHTTSCTTC----
T ss_pred eeEEEEEEEECCCCEEEEEecCC---------------CCCCcccHHHHHHHH-HHhhccC---CHHHHHHHHHHh----
Confidence 35699999999999999965321 124556677766555 3567755 443333322111
Q ss_pred ccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcceeeeeeEEeecCCccCCCcccccceeecc
Q 013317 98 DGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHADNKLAMQEFMILP 177 (445)
Q Consensus 98 ~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~ip~p~~~~~~gg~~~~~~~~~~e~~~~p 177 (445)
..+++|||+||| +.|| || |+.+ + +. |+... +
T Consensus 85 ---------------~~a~~aid~Al~-l~gk---------lg---g~~~-~-~~--y~~~~-----------------~ 115 (332)
T 2ozt_A 85 ---------------PAAQFGFATAWQ-SVGR---------LP---YRVR-P-WP--ICALL-----------------G 115 (332)
T ss_dssp ---------------HHHHHHHHHHHH-HTTT---------CS---CCCC-C-CC--BCEEE-----------------C
T ss_pred ---------------HHHHHHHHHHHH-Hhcc---------cC---CCCC-C-cc--eEEec-----------------C
Confidence 248899999999 8777 46 6544 3 33 33211 1
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHHHHHHHHHhcCCCcceEEEEeccccccc
Q 013317 178 IGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFY 257 (445)
Q Consensus 178 ~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~ 257 (445)
.+++..+++.+...+||+.+ |+|+|. .+.+.+.+.+++||++ +| +++.|++|+
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~----KiKvg~------------~~~~~d~~~v~avr~~---~g--~~~~L~vDa------ 168 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTF----KWKVGV------------MSPEEEQAILKALLAA---LP--PGAKLRLDA------ 168 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEE----EEECSS------------SCHHHHHHHHHHHHHH---SC--TTCEEEEEC------
T ss_pred ChHHHHHHHHHHHHcCCcEE----EEEeCC------------CChHHHHHHHHHHHHH---cC--CCCEEEEcc------
Confidence 11233456655555667654 345441 1122233444444443 45 579999999
Q ss_pred cccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcC---CeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccC
Q 013317 258 DRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDH---PIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTN 334 (445)
Q Consensus 258 ~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~---~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~ 334 (445)
|+.||.+++++++. .+++| ++.|||||++++|+++|++|+++++ +||++||+ +.+
T Consensus 169 ------------------N~~~~~~~A~~~~~-~l~~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~--ipIa~dEs-~~~ 226 (332)
T 2ozt_A 169 ------------------NGSWDRATANRWFA-WLDRHGNGKIEYVEQPLPPDQWQALLSLAQTVT--TAIALDES-VVS 226 (332)
T ss_dssp ------------------TTCCCHHHHHHHHH-HHHHHCCTTEEEEECCSCTTCHHHHHHHHHHCS--SCEEESTT-CCS
T ss_pred ------------------cCCCCHHHHHHHHH-HHHhhccCCcceeECCCCCCCHHHHHHHHHhCC--CCEEeCCC-CCC
Confidence 46789999999865 57889 9999999999999999999999988 99999998 467
Q ss_pred HHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHc--CCcEEecCCCCCChhH--HHHHHHhhhcCCccccCCCCC
Q 013317 335 PKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRA--GWGVMASHRSGETEDT--FIADLSVGLATGQIKTGAPCR 410 (445)
Q Consensus 335 ~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~--g~~~~~~~~~~et~~~--~~~~la~a~~~~~~~~G~~~~ 410 (445)
+++++++++.+++|+++||++++||++ +++++|+++ |++++++|+ .||.++ +.+|||.++.+. ..+| +..
T Consensus 227 ~~~~~~~~~~~a~~~i~ik~~~~GGi~---~i~~~A~~~~~gi~~~~~~~-~es~i~~aa~~hlaa~~~~~-~~~g-l~t 300 (332)
T 2ozt_A 227 AAEVQRWVDRGWPGFFVIKTALFGDPD---SLSLLLRRGLEPQRLVFSSA-LEGAIARTAIFHLLETWQPC-HALG-FGV 300 (332)
T ss_dssp HHHHHHHHHTTCCSEEEECHHHHSCHH---HHHHHHHTTCCGGGEEEBCC-SCCHHHHHHHHHHHHHHCCC-SCBB-CCC
T ss_pred HHHHHHHHHhCCCCEEEEChhhhCCHH---HHHHHHHHhCCCCcEEEeCC-cchHHHHHHHHHHHHhCCCC-cCCc-CCc
Confidence 999999999999999999999999998 678899999 999999885 588765 466777776532 2222 211
Q ss_pred -------chhHHHHHHHHHHHHHhCC
Q 013317 411 -------SERLAKYNQLLRIEEELGP 429 (445)
Q Consensus 411 -------~er~~k~n~ll~i~~~l~~ 429 (445)
+.-. +|..-++++.+++
T Consensus 301 ~~~~~~~g~l~--~~~~~~~w~~~~~ 324 (332)
T 2ozt_A 301 DRWRSAPLLTT--LTAYERLWERLDQ 324 (332)
T ss_dssp TTTCCCCCCCS--HHHHHHHHHTC--
T ss_pred hhhcccCCccc--ccCHHHHHHHhhh
Confidence 1111 5666677776643
No 119
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=100.00 E-value=5.3e-34 Score=283.36 Aligned_cols=252 Identities=15% Similarity=0.109 Sum_probs=175.7
Q ss_pred CcceeEEEEEEEe------cCCC----CCeEEEEEEeCCCcEEEEeccCCCccccccceeeccCCcccCCccHHHHHHHH
Q 013317 1 MVTINAVKARQIF------DSRG----NPTVEVDVSLSDGTLARAAVPSGASTGIYEALELRDGGWDYHGRGVLKAVQNV 70 (445)
Q Consensus 1 ~~~I~~v~~~~i~------~~~g----~~~v~V~V~td~G~~G~g~~~~~~~~g~~e~~~~~d~~~~y~~~~~~~a~~~i 70 (445)
||||+ +....+- .+ + +..++|+|+||+|++|||++... +.|++++..+ .|
T Consensus 1 mMkI~-~~~~~~pl~~p~~~s-~~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~~e~~~~---~l 60 (330)
T 3caw_A 1 MIKIS-YSPYTLKPVQSLNAA-TAATAREGVLLKVEWNDGLYGFADLHPW---------------PELGDLSLEE---QL 60 (330)
T ss_dssp --CEE-EEEEEECBC-----------CEEEEEEEEECTTSCEEEEEECCC---------------GGGTCCCHHH---HH
T ss_pred CcEEE-EEEEEeecCCCeEee-eEEEEeeEEEEEEEECCCCEEEEeecCC---------------CCcCcccHHH---HH
Confidence 88998 5444441 22 2 35699999999999999965321 1134555543 23
Q ss_pred HHhHhhhccCCCCCCHHHHHHHHHHhhccCCCccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccee
Q 013317 71 NSIIGPALVGKDPTEQTQIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVL 150 (445)
Q Consensus 71 ~~~l~p~LiG~d~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG~~~G~~~~~i 150 (445)
.+.+ |. . ...+|++|||+||||+.||.+|+|||+ | | +++
T Consensus 61 ~~~l------------------l~-~--------------~~~~a~said~AlwDl~gk~~g~Pl~~--G---g---~~v 99 (330)
T 3caw_A 61 SDLR------------------MG-R--------------MTTQIEQSIWLARRDALLRKEKKHVFD--G---G---EKI 99 (330)
T ss_dssp HHHH------------------HT-C--------------CCHHHHHHHHHHHHHHHHHHTTCBTTT--T---S---CCC
T ss_pred HHHH------------------hc-c--------------chHHHHHHHHHHHHHHHHHHcCCcccc--C---C---Cce
Confidence 3322 11 1 123699999999999999999999999 9 7 456
Q ss_pred eeeeEEeecCCccCCCcccccceeeccCCcccHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCchHHHH
Q 013317 151 PVPAFNVINGGSHADNKLAMQEFMILPIGASTFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQESYEGFE 230 (445)
Q Consensus 151 p~p~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~ea~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~ 230 (445)
|+ |.++++..+. +. ++.. +...+||+++ |.|+|. + ..+.++
T Consensus 100 ~~--~~~~~~~~~~----~~---------~~~~----~~~~~G~~~~----KiKvg~-------------~---~~~d~~ 140 (330)
T 3caw_A 100 KN--NYLLSHFQDL----KP---------GFLD----GLKNEGYNTV----KVKMGR-------------D---LQKEAD 140 (330)
T ss_dssp CB--CEEECTTSCC----CT---------THHH----HHHHHTCCEE----EEECSS-------------C---HHHHHH
T ss_pred EE--EEEecCCCCC----CH---------HHHH----HHHHcCCcEE----EEecCC-------------C---HHHHHH
Confidence 66 4433200000 00 1111 3344567655 345441 1 233455
Q ss_pred HHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhc---CCeeEEECCCCcc
Q 013317 231 LLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD---HPIVSIEDPFDQD 307 (445)
Q Consensus 231 ~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~---~~i~~iEdP~~~~ 307 (445)
.+ +++|+ +++.|++|+ |+.||.+++++++. .+++ +++.|||||++++
T Consensus 141 ~v-~avr~----~~~~l~vDa------------------------N~~~~~~~A~~~~~-~l~~~~~~~l~~iEqP~~~~ 190 (330)
T 3caw_A 141 ML-THIAA----SGMRMRLDF------------------------NALGSWQTFEKFMV-NLPLTVRPLIEYVEDPFPFD 190 (330)
T ss_dssp HH-HHHHH----TTCEEEEEC------------------------TTCSCHHHHHHHHH-TSCTTTGGGEEEEECCSSCC
T ss_pred HH-HHHhC----CCCeEEEEC------------------------CCCCCHHHHHHHHH-HhhhhccCCceEEECCCCCC
Confidence 55 34444 468999999 57789999999854 5788 9999999999999
Q ss_pred -CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 013317 308 -DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGET 386 (445)
Q Consensus 308 -D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et 386 (445)
|++++ |+ + . +||++||+ ++++++++++.+++|++|+|++++ |++ +++++|+++|+++++++ +.|+
T Consensus 191 ~d~~~~--l~-~--~-iPIa~dEs---~~~~~~~~i~~~a~d~v~~k~~~~-Gi~---~i~~~A~~~gi~~~~~~-~~es 256 (330)
T 3caw_A 191 FHAWGE--AR-K--L-AKIALDNQ---YDKVPWGKIASAPFDVIVIKPAKT-DVD---KAVAQCQKWNLKLAVTS-YMDH 256 (330)
T ss_dssp HHHHHH--HT-T--T-SCEEESTT---GGGCCTTTCSSCSCSEEEECTTTS-CHH---HHHHHHHHTTCEEEEBC-CSCC
T ss_pred ccHHHH--HH-h--c-CcEEeCCC---CHHHHHHHHHcCCCCEEEechhhc-cHH---HHHHHHHHcCCcEEEeC-ccCc
Confidence 99999 77 4 3 99999998 589999999999999999999999 999 99999999999988776 5688
Q ss_pred hhHH--HHHHHh
Q 013317 387 EDTF--IADLSV 396 (445)
Q Consensus 387 ~~~~--~~~la~ 396 (445)
.++. .+||+.
T Consensus 257 ~ig~aa~~hlaa 268 (330)
T 3caw_A 257 PVGVVHAVGVAM 268 (330)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 7654 566666
No 120
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=99.93 E-value=3.9e-26 Score=225.99 Aligned_cols=138 Identities=18% Similarity=0.300 Sum_probs=104.7
Q ss_pred cCchHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEEC
Q 013317 223 QESYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIED 302 (445)
Q Consensus 223 ~~~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEd 302 (445)
+.+.+.+++||+++ | +++.|+||+ |+.||.+++++++ +.++++++.||||
T Consensus 108 ~~d~~~v~avR~~~---G--~~~~L~vDa------------------------N~~w~~~~A~~~~-~~L~~~~l~~iEq 157 (327)
T 2opj_A 108 ANDVARVEAVRDAL---G--PRGRVRIDV------------------------NGAWDVDTAVRMI-RLLDRFELEYVEQ 157 (327)
T ss_dssp -CHHHHHHHHHHHH---C--TTSEEEEEC------------------------TTCSCHHHHHHHH-HHHGGGCEEEEEC
T ss_pred HHHHHHHHHHHHHh---C--CCCEEEEEC------------------------CCCCCHHHHHHHH-HHHHhcCCcEEeC
Confidence 34456666666655 5 579999999 5778999999985 4578999999999
Q ss_pred CCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCC
Q 013317 303 PFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~ 382 (445)
|++ +++++++|+++++ +||++||+. .+++++.++++.+++|++|||++++||||+++++++ .+|++++++++
T Consensus 158 P~~--~~~~~~~l~~~~~--iPIa~dEs~-~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~ia~---~~gi~~~~~~~ 229 (327)
T 2opj_A 158 PCA--TVDELAEVRRRVS--VPIAADESI-RRAEDPLRVRDAEAADVVVLKVQPLGGVRAALRLAE---ECGLPVVVSSA 229 (327)
T ss_dssp CSS--SHHHHHHHHHHCS--SCEEC------------CTTTTTCCSBEEECHHHHTSHHHHHHHHH---HTCSCEEEBCC
T ss_pred CCC--CHHHHHHHHhhCC--CCEEcCCCC-CCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHH---HcCCcEEEcCC
Confidence 997 5899999999998 999999985 669999999999999999999999999999998754 57999987774
Q ss_pred CCCChhHHH--HHHHhhhc
Q 013317 383 SGETEDTFI--ADLSVGLA 399 (445)
Q Consensus 383 ~~et~~~~~--~~la~a~~ 399 (445)
.|+.++.. +||+.++.
T Consensus 230 -~es~ig~aa~~hlaaa~~ 247 (327)
T 2opj_A 230 -VETSVGLAAGVALAAALP 247 (327)
T ss_dssp -SCCHHHHHHHHHHHHHSS
T ss_pred -CcCHHHHHHHHHHHHhCC
Confidence 68887654 56655543
No 121
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=96.72 E-value=0.011 Score=58.22 Aligned_cols=72 Identities=11% Similarity=0.124 Sum_probs=57.4
Q ss_pred CCcChHHHHHHHHHhhhcCCeeEEECCC------------CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhc
Q 013317 277 QKVSGDGLKNVYRSFISDHPIVSIEDPF------------DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKE 344 (445)
Q Consensus 277 ~~~t~~~~i~~~~~~~~~~~i~~iEdP~------------~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~ 344 (445)
.+++.++.+++ .+.+++.++.||+-.. +..+++..+++++.++ +||++... +++++++.++++.
T Consensus 234 ~g~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~--iPVi~~Gg-i~t~e~a~~~l~~ 309 (349)
T 3hgj_A 234 GGWSLEDTLAF-ARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVG--LRTGAVGL-ITTPEQAETLLQA 309 (349)
T ss_dssp TSCCHHHHHHH-HHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHC--CEEEECSS-CCCHHHHHHHHHT
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcC--ceEEEECC-CCCHHHHHHHHHC
Confidence 45788888876 5567889999988542 2246778899999998 99988776 4679999999999
Q ss_pred CCCCEEEe
Q 013317 345 KTCNALLL 352 (445)
Q Consensus 345 ~a~d~v~i 352 (445)
+.+|.|.+
T Consensus 310 G~aD~V~i 317 (349)
T 3hgj_A 310 GSADLVLL 317 (349)
T ss_dssp TSCSEEEE
T ss_pred CCceEEEe
Confidence 99999986
No 122
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.19 E-value=0.036 Score=54.27 Aligned_cols=73 Identities=4% Similarity=0.081 Sum_probs=57.7
Q ss_pred CCcChHHHHHHHHHhhhcCCeeEEE--------C--CCCc-cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcC
Q 013317 277 QKVSGDGLKNVYRSFISDHPIVSIE--------D--PFDQ-DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEK 345 (445)
Q Consensus 277 ~~~t~~~~i~~~~~~~~~~~i~~iE--------d--P~~~-~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~ 345 (445)
.+++.++.+++ .+.+++.++.||+ + |..+ .+++..+++++.++ +||++... +++++++.++++.+
T Consensus 224 ~g~~~~~~~~~-a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~--iPVi~~Gg-i~s~~~a~~~l~~G 299 (338)
T 1z41_A 224 KGLDIADHIGF-AKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD--MATGAVGM-ITDGSMAEEILQNG 299 (338)
T ss_dssp TSCCHHHHHHH-HHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC--CEEEECSS-CCSHHHHHHHHHTT
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC--CCEEEECC-CCCHHHHHHHHHcC
Confidence 46788888876 5567889988887 2 3333 36778899999998 99977776 46799999999999
Q ss_pred CCCEEEec
Q 013317 346 TCNALLLK 353 (445)
Q Consensus 346 a~d~v~ik 353 (445)
.+|.|.+=
T Consensus 300 ~aD~V~iG 307 (338)
T 1z41_A 300 RADLIFIG 307 (338)
T ss_dssp SCSEEEEC
T ss_pred CceEEeec
Confidence 99999863
No 123
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=95.80 E-value=0.071 Score=51.85 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=75.6
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCc-cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQ-DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~-~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G 358 (445)
+.+..++.+.+ +++.+-..+--.++. ++.+.+.+++++++ +||++|-.+ ++.-+...++.+ +|.+.|.++.+|
T Consensus 44 D~~atv~Qi~~-l~~aG~diVRvavp~~~~a~al~~I~~~~~--vPlvaDiHf--~~~lal~a~e~G-~dklRINPGNig 117 (366)
T 3noy_A 44 DVEATLNQIKR-LYEAGCEIVRVAVPHKEDVEALEEIVKKSP--MPVIADIHF--APSYAFLSMEKG-VHGIRINPGNIG 117 (366)
T ss_dssp CHHHHHHHHHH-HHHTTCCEEEEECCSHHHHHHHHHHHHHCS--SCEEEECCS--CHHHHHHHHHTT-CSEEEECHHHHS
T ss_pred CHHHHHHHHHH-HHHcCCCEEEeCCCChHHHHHHHHHHhcCC--CCEEEeCCC--CHHHHHHHHHhC-CCeEEECCcccC
Confidence 45555555454 455665666666654 56788999999988 999999654 577777776653 788999999999
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCC
Q 013317 359 SVTESIEAVKMAKRAGWGVMASHRS 383 (445)
Q Consensus 359 Git~a~~i~~~A~~~g~~~~~~~~~ 383 (445)
.-....++++.|+++|+++-+|-++
T Consensus 118 ~~~~~~~vv~~ak~~~~piRIGvN~ 142 (366)
T 3noy_A 118 KEEIVREIVEEAKRRGVAVRIGVNS 142 (366)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred chhHHHHHHHHHHHcCCCEEEecCC
Confidence 9999999999999999999988543
No 124
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=95.79 E-value=0.068 Score=52.41 Aligned_cols=70 Identities=11% Similarity=0.160 Sum_probs=54.6
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECC----------C-CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDP----------F-DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 346 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP----------~-~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a 346 (445)
+++.++.+++ .+.+++. +.||+-. . +..+++..+++++.++ +||++... +++++++.++++.+.
T Consensus 226 g~~~~~~~~~-a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~--iPVi~~Gg-i~t~e~Ae~~l~~G~ 300 (343)
T 3kru_A 226 GINIDMMVEY-INMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN--IKTSAVGL-ITTQELAEEILSNER 300 (343)
T ss_dssp SCCHHHHHHH-HHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT--CEEEEESS-CCCHHHHHHHHHTTS
T ss_pred CccHHHHHHH-HHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC--cccceeee-eeHHHHHHHHHhchh
Confidence 5778888886 5567888 8888762 1 2236677788999998 99877665 467999999999999
Q ss_pred CCEEEe
Q 013317 347 CNALLL 352 (445)
Q Consensus 347 ~d~v~i 352 (445)
+|+|.+
T Consensus 301 aD~V~i 306 (343)
T 3kru_A 301 ADLVAL 306 (343)
T ss_dssp CSEEEE
T ss_pred hHHHHH
Confidence 999875
No 125
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=95.20 E-value=0.057 Score=53.37 Aligned_cols=70 Identities=4% Similarity=-0.050 Sum_probs=54.3
Q ss_pred cChHHHHHHHHHhhhcCCeeEEECC-----------CC-ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCC
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIEDP-----------FD-QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 346 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iEdP-----------~~-~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a 346 (445)
++.++.+++ .+.+++.++.||+-. .. ..+++..+++++.++ +||++... +++++++.++++.+.
T Consensus 243 ~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~--iPVi~~Gg-I~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 243 QTLEESIEL-ARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAK--LPVTSAWG-FGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHH-HHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT--CCEEECSS-TTSHHHHHHHHHTTS
T ss_pred CCHHHHHHH-HHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcC--CcEEEeCC-CCCHHHHHHHHHCCC
Confidence 667788876 556788898888732 11 235677789999998 99977776 467999999999999
Q ss_pred CCEEEe
Q 013317 347 CNALLL 352 (445)
Q Consensus 347 ~d~v~i 352 (445)
+|.|.+
T Consensus 319 aD~V~i 324 (363)
T 3l5l_A 319 LDLVSV 324 (363)
T ss_dssp CSEEEC
T ss_pred ccEEEe
Confidence 999875
No 126
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.98 E-value=0.071 Score=57.05 Aligned_cols=72 Identities=8% Similarity=0.088 Sum_probs=54.9
Q ss_pred CCcChHHHHHHHHHhhhcCCeeEEE-------CCCC--------ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHH
Q 013317 277 QKVSGDGLKNVYRSFISDHPIVSIE-------DPFD--------QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKA 341 (445)
Q Consensus 277 ~~~t~~~~i~~~~~~~~~~~i~~iE-------dP~~--------~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~ 341 (445)
.+++.++++++ .+.++++++.||+ .+++ ...++..+++++.++ +||++... +++++++.++
T Consensus 223 ~g~~~~~~~~~-a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--iPvi~~Gg-i~~~~~a~~~ 298 (671)
T 1ps9_A 223 DGGTFAETVEL-AQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS--LPLVTTNR-INDPQVADDI 298 (671)
T ss_dssp TCCCHHHHHHH-HHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS--SCEEECSS-CCSHHHHHHH
T ss_pred CCCCHHHHHHH-HHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC--ceEEEeCC-CCCHHHHHHH
Confidence 35788888876 4567888888885 3333 123566788888887 99987776 4679999999
Q ss_pred HhcCCCCEEEe
Q 013317 342 IKEKTCNALLL 352 (445)
Q Consensus 342 i~~~a~d~v~i 352 (445)
++.+.+|+|.+
T Consensus 299 l~~g~aD~V~~ 309 (671)
T 1ps9_A 299 LSRGDADMVSM 309 (671)
T ss_dssp HHTTSCSEEEE
T ss_pred HHcCCCCEEEe
Confidence 99999999984
No 127
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=94.91 E-value=0.081 Score=52.61 Aligned_cols=70 Identities=10% Similarity=-0.009 Sum_probs=54.3
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCCc-----cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFDQ-----DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~~-----~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
+++.++++++ .+.++++++.||+.+... ...+ .+++++.++ +||++...+ +++++.++++.+.+|+|.+
T Consensus 262 ~~~~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~--iPvi~~G~i--t~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 262 SNPEALTKHL-CKKIEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGSYS--GVKISNLRY--DFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp SCHHHHHHHH-HHHHGGGCCSEEEEECSCTTSCCCCCH-HHHHHTTCC--SCEEEESSC--CHHHHHHHHHTTSCSEEEE
T ss_pred CCCHHHHHHH-HHHHHHhCCCEEEEcCCCcCCCCccHH-HHHHHHHCC--CcEEEECCC--CHHHHHHHHHcCCCeEEEe
Confidence 4567778776 556888999999876521 1125 888999887 899877764 5999999999999999986
Q ss_pred c
Q 013317 353 K 353 (445)
Q Consensus 353 k 353 (445)
=
T Consensus 336 g 336 (379)
T 3aty_A 336 G 336 (379)
T ss_dssp S
T ss_pred c
Confidence 3
No 128
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=94.78 E-value=0.056 Score=53.75 Aligned_cols=69 Identities=4% Similarity=-0.102 Sum_probs=51.4
Q ss_pred cChHHHHHHHHHhhhcCCeeEEECCCC------c--cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEE
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIEDPFD------Q--DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNAL 350 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iEdP~~------~--~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v 350 (445)
++.++++++ .+.++++++.||+-+.. + .+++..+++++.++ +||++...+ +++++.++++.+.+|+|
T Consensus 253 ~~~~~~~~l-a~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~--iPvi~~G~i--~~~~a~~~l~~g~aD~V 327 (376)
T 1icp_A 253 NPTALGLYM-VESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYK--GTFIVAGGY--DREDGNRALIEDRADLV 327 (376)
T ss_dssp CHHHHHHHH-HHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCC--SCEEEESSC--CHHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHH-HHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcC--CCEEEeCCC--CHHHHHHHHHCCCCcEE
Confidence 455667766 56688999999986532 1 23344578898888 898776664 59999999999999999
Q ss_pred Ee
Q 013317 351 LL 352 (445)
Q Consensus 351 ~i 352 (445)
.+
T Consensus 328 ~~ 329 (376)
T 1icp_A 328 AY 329 (376)
T ss_dssp EE
T ss_pred ee
Confidence 86
No 129
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=93.70 E-value=0.37 Score=47.49 Aligned_cols=70 Identities=9% Similarity=0.039 Sum_probs=54.7
Q ss_pred cChHHHHHHHHHhhhcCCeeEEECCCC------ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIEDPFD------QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iEdP~~------~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
++.++++++ .+.++++++.||+-+.. ..+++..+++++.++ +||++...+ +++++.++++.+.+|+|.+
T Consensus 248 ~~~~~~~~~-a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~--iPvi~~Ggi--t~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 248 NEEADALYL-IEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFH--GVIIGAGAY--TAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp THHHHHHHH-HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC--SEEEEESSC--CHHHHHHHHHTTSCSEEEE
T ss_pred CCHHHHHHH-HHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCC--CCEEEECCc--CHHHHHHHHHCCCccEEEE
Confidence 456677766 55678899999987642 345677788999988 999777664 5999999999999999986
Q ss_pred c
Q 013317 353 K 353 (445)
Q Consensus 353 k 353 (445)
=
T Consensus 323 g 323 (364)
T 1vyr_A 323 G 323 (364)
T ss_dssp S
T ss_pred C
Confidence 3
No 130
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=92.83 E-value=0.45 Score=47.15 Aligned_cols=70 Identities=4% Similarity=-0.049 Sum_probs=52.0
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC------c-cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEE
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD------Q-DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNAL 350 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~------~-~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v 350 (445)
+++.++.+++ .+.++++++.||+-.-. + .+++..+++++.++ +||++-..+ + ++++.++++.+.+|+|
T Consensus 251 ~~~~~~~~~l-a~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~--iPvi~~Ggi-~-~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 251 DEPEAMAFYL-AGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFK--GGLIYCGNY-D-AGRAQARLDDNTADAV 325 (377)
T ss_dssp SCHHHHHHHH-HHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCC--SEEEEESSC-C-HHHHHHHHHTTSCSEE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCC--CCEEEECCC-C-HHHHHHHHHCCCceEE
Confidence 4567777776 55678899888874221 1 24556788999988 898666653 4 9999999999999999
Q ss_pred Ee
Q 013317 351 LL 352 (445)
Q Consensus 351 ~i 352 (445)
.+
T Consensus 326 ~i 327 (377)
T 2r14_A 326 AF 327 (377)
T ss_dssp EE
T ss_pred ee
Confidence 86
No 131
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=92.72 E-value=0.63 Score=45.87 Aligned_cols=71 Identities=11% Similarity=0.050 Sum_probs=52.9
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC------ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEE
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD------QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALL 351 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~------~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ 351 (445)
.++.++++++ .+.+++.++.||+-.-. ...++..+++++.++ +||++-... +++++.++++.+.+|+|.
T Consensus 246 ~~~~~~~~~~-a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~--iPvi~~Ggi--~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 246 ADPILTYTAA-AALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQ--GVLIYAGRY--NAEKAEQAINDGLADMIG 320 (365)
T ss_dssp SSHHHHHHHH-HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC--SEEEEESSC--CHHHHHHHHHTTSCSEEE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCC--CcEEEeCCC--CHHHHHHHHHCCCcceeh
Confidence 3566777776 55678889888875432 123566788999988 898666654 599999999999999998
Q ss_pred ec
Q 013317 352 LK 353 (445)
Q Consensus 352 ik 353 (445)
+=
T Consensus 321 ig 322 (365)
T 2gou_A 321 FG 322 (365)
T ss_dssp CC
T ss_pred hc
Confidence 63
No 132
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.71 E-value=0.52 Score=45.96 Aligned_cols=71 Identities=6% Similarity=0.050 Sum_probs=52.6
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEEC--------C--CC-ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIED--------P--FD-QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 346 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEd--------P--~~-~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a 346 (445)
+++.++.+++ .+.+++.++.||+= + .. ..+++-.+++++.++ +||++.-. +++++++.++++.+.
T Consensus 225 g~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~--iPVi~~Gg-I~s~e~a~~~L~~G~ 300 (340)
T 3gr7_A 225 GLTAKDYVPY-AKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD--IPTGAVGL-ITSGWQAEEILQNGR 300 (340)
T ss_dssp SCCGGGHHHH-HHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT--CCEEEESS-CCCHHHHHHHHHTTS
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC--CcEEeeCC-CCCHHHHHHHHHCCC
Confidence 4677788876 45678888877752 1 11 225677788999987 88865544 467999999999999
Q ss_pred CCEEEe
Q 013317 347 CNALLL 352 (445)
Q Consensus 347 ~d~v~i 352 (445)
+|.|.+
T Consensus 301 aD~V~i 306 (340)
T 3gr7_A 301 ADLVFL 306 (340)
T ss_dssp CSEEEE
T ss_pred eeEEEe
Confidence 999886
No 133
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=92.51 E-value=0.37 Score=47.45 Aligned_cols=67 Identities=9% Similarity=0.034 Sum_probs=48.7
Q ss_pred hHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 281 GDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 281 ~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
.++.+++ .+.+++.++.||+-.-.....+..+++++.++ +||++-.. + +++++.++++.+.+|.|.+
T Consensus 249 ~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~--iPvi~~Gg-i-t~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 249 AATFGHV-ARELGRRRIAFLFARESFGGDAIGQQLKAAFG--GPFIVNEN-F-TLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHH-HHHHHHTTCSEEEEECCCSTTCCHHHHHHHHC--SCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHH-HHHHHHcCCCEEEECCCCCCHHHHHHHHHHcC--CCEEEeCC-C-CHHHHHHHHHcCCccEEEE
Confidence 4556665 56678899999875543221234678888888 78755554 4 6999999999999999885
No 134
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=92.37 E-value=0.39 Score=47.31 Aligned_cols=67 Identities=10% Similarity=0.078 Sum_probs=48.3
Q ss_pred hHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 281 GDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 281 ~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
.++.+++ .+.+++.++.||+-.-.....+..+++++.++ +||++-.. + +++++.++++.+.+|+|.+
T Consensus 241 ~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~--iPvi~~Gg-i-t~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 241 AETFTYV-ARELGKRGIAFICSREREADDSIGPLIKEAFG--GPYIVNER-F-DKASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHH-HHHHHHTTCSEEEEECCCCTTCCHHHHHHHHC--SCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHH-HHHHHHhCCCEEEECCCCCCHHHHHHHHHHCC--CCEEEeCC-C-CHHHHHHHHHcCCccEEEE
Confidence 4556665 56688899999875433211134678888888 78755554 4 6999999999999999985
No 135
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=91.24 E-value=0.47 Score=43.14 Aligned_cols=109 Identities=13% Similarity=0.092 Sum_probs=75.2
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCcc-CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQD-DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~-D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G 358 (445)
+++++++.. +.+-+-++.+||=++... -++..++|+++++ -+++|--. +.+.++++.+++.++-=++.+..
T Consensus 23 ~~~~a~~~a-~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p--~~~IGAGT-Vlt~~~a~~ai~AGA~fivsP~~---- 94 (217)
T 3lab_A 23 DLVHAIPMA-KALVAGGVHLLEVTLRTEAGLAAISAIKKAVP--EAIVGAGT-VCTADDFQKAIDAGAQFIVSPGL---- 94 (217)
T ss_dssp CGGGHHHHH-HHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT--TSEEEEEC-CCSHHHHHHHHHHTCSEEEESSC----
T ss_pred CHHHHHHHH-HHHHHcCCCEEEEeCCCccHHHHHHHHHHHCC--CCeEeecc-ccCHHHHHHHHHcCCCEEEeCCC----
Confidence 567888764 456668999999999754 4678899999886 34444444 45799999999998866666543
Q ss_pred cHHHHHHHHHHHHHcCC------cEEecCCCCCChhHHHHHHHhhhcCCcccc
Q 013317 359 SVTESIEAVKMAKRAGW------GVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~i~~~A~~~g~------~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
..++++.|+++|+ +++.|++. -++ +.-|...++..+|+
T Consensus 95 ----~~evi~~~~~~~v~~~~~~~~~PG~~T-ptE----~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 95 ----TPELIEKAKQVKLDGQWQGVFLPGVAT-ASE----VMIAAQAGITQLKC 138 (217)
T ss_dssp ----CHHHHHHHHHHHHHCSCCCEEEEEECS-HHH----HHHHHHTTCCEEEE
T ss_pred ----cHHHHHHHHHcCCCccCCCeEeCCCCC-HHH----HHHHHHcCCCEEEE
Confidence 2367788999999 98877742 222 22234456777774
No 136
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=90.06 E-value=0.8 Score=45.75 Aligned_cols=71 Identities=4% Similarity=-0.104 Sum_probs=49.2
Q ss_pred CcChHHHHHHHHHhhhcCC------eeEEEC--------CCCc--------cCHHHHHHHHHHhCCceEEEeccccccCH
Q 013317 278 KVSGDGLKNVYRSFISDHP------IVSIED--------PFDQ--------DDWEHYAELTGKIGRHVQIVGDDLLVTNP 335 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~------i~~iEd--------P~~~--------~D~~~~~~L~~~~~~~~pI~gde~~~~~~ 335 (445)
.++.++.+++ .+.+++.+ +.||+- +..+ .+++..+++++.++ +||++-.. + ++
T Consensus 256 ~~~~~~~~~l-a~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~--iPvi~~G~-i-~~ 330 (402)
T 2hsa_B 256 SNPLSLGLAV-VERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQ--GTFICSGG-Y-TR 330 (402)
T ss_dssp SCHHHHHHHH-HHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCS--SCEEEESS-C-CH
T ss_pred CCCHHHHHHH-HHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCC--CCEEEeCC-C-CH
Confidence 3456677766 45677777 777653 1111 13445577888887 88866655 4 59
Q ss_pred HHHHHHHhcCCCCEEEec
Q 013317 336 KRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 336 ~~~~~~i~~~a~d~v~ik 353 (445)
+++.++++.+.+|+|.+=
T Consensus 331 ~~a~~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 331 ELGIEAVAQGDADLVSYG 348 (402)
T ss_dssp HHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHCCCCceeeec
Confidence 999999999999999863
No 137
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=88.29 E-value=2.5 Score=42.35 Aligned_cols=71 Identities=7% Similarity=0.130 Sum_probs=47.2
Q ss_pred CcChHHHHHHHHHhhhc-CCeeEEE------------CCCCc--cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHH
Q 013317 278 KVSGDGLKNVYRSFISD-HPIVSIE------------DPFDQ--DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAI 342 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~-~~i~~iE------------dP~~~--~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i 342 (445)
+++.++.+++. +.+++ .++.||+ .|... .+.+-.+.+++.++.++||++--. +++++++.+++
T Consensus 260 G~~~ed~~~la-~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~Gg-I~t~e~Ae~~L 337 (419)
T 3l5a_A 260 GYTIDEFNQLI-DWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGG-INSPESALDAL 337 (419)
T ss_dssp EECHHHHHHHH-HHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSS-CCSHHHHHHHG
T ss_pred CCCHHHHHHHH-HHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECC-CCCHHHHHHHH
Confidence 56778888764 55677 7777664 11111 133456778888743488755443 46799999999
Q ss_pred hcCCCCEEEe
Q 013317 343 KEKTCNALLL 352 (445)
Q Consensus 343 ~~~a~d~v~i 352 (445)
+. +|.|.+
T Consensus 338 ~~--aDlVai 345 (419)
T 3l5a_A 338 QH--ADMVGM 345 (419)
T ss_dssp GG--CSEEEE
T ss_pred Hh--CCcHHH
Confidence 88 898875
No 138
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=86.72 E-value=1.4 Score=40.45 Aligned_cols=109 Identities=11% Similarity=0.138 Sum_probs=71.5
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCcc-CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQD-DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~-D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G 358 (445)
+++++++... .+-+-++.+||=++... ..+..++++++++. +-|-.+ . +.+.++++.+++.++-=++.+
T Consensus 44 ~~~~a~~~a~-al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~-~~iGaG-T-Vlt~~~a~~Ai~AGA~fIvsP------ 113 (232)
T 4e38_A 44 NAEDIIPLGK-VLAENGLPAAEITFRSDAAVEAIRLLRQAQPE-MLIGAG-T-ILNGEQALAAKEAGATFVVSP------ 113 (232)
T ss_dssp SGGGHHHHHH-HHHHTTCCEEEEETTSTTHHHHHHHHHHHCTT-CEEEEE-C-CCSHHHHHHHHHHTCSEEECS------
T ss_pred CHHHHHHHHH-HHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCC-CEEeEC-C-cCCHHHHHHHHHcCCCEEEeC------
Confidence 4567777644 45568999999888643 46778889988752 444333 3 346899999998887444332
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcccc
Q 013317 359 SVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
++ ..++++.|+++|++++.|.+ |... +.-|...++.++|+
T Consensus 114 ~~--~~~vi~~~~~~gi~~ipGv~---TptE--i~~A~~~Gad~vK~ 153 (232)
T 4e38_A 114 GF--NPNTVRACQEIGIDIVPGVN---NPST--VEAALEMGLTTLKF 153 (232)
T ss_dssp SC--CHHHHHHHHHHTCEEECEEC---SHHH--HHHHHHTTCCEEEE
T ss_pred CC--CHHHHHHHHHcCCCEEcCCC---CHHH--HHHHHHcCCCEEEE
Confidence 22 24677889999999988774 2111 22244557777774
No 139
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=86.50 E-value=3.1 Score=39.36 Aligned_cols=123 Identities=18% Similarity=0.145 Sum_probs=79.0
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCC--C-------ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPF--D-------QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~--~-------~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
.++.++.++++ +.+++.++..||.-. . .++++-.+.+++..+ ++++.= ..+..+++++++.+ ++
T Consensus 22 ~~~~e~k~~i~-~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~--~~v~~l---~~n~~~i~~a~~~G-~~ 94 (295)
T 1ydn_A 22 FVPTADKIALI-NRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADG--VRYSVL---VPNMKGYEAAAAAH-AD 94 (295)
T ss_dssp CCCHHHHHHHH-HHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSS--SEEEEE---CSSHHHHHHHHHTT-CS
T ss_pred CcCHHHHHHHH-HHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCC--CEEEEE---eCCHHHHHHHHHCC-CC
Confidence 36788888875 557889999999843 1 145566666655433 776432 24689999998875 56
Q ss_pred EEEecc--C-----------ccccHHHHHHHHHHHHHcCCcEE--ecCCC-----CCChhHH---HHHHHhhhcCCcccc
Q 013317 349 ALLLKV--N-----------QIGSVTESIEAVKMAKRAGWGVM--ASHRS-----GETEDTF---IADLSVGLATGQIKT 405 (445)
Q Consensus 349 ~v~ik~--~-----------k~GGit~a~~i~~~A~~~g~~~~--~~~~~-----~et~~~~---~~~la~a~~~~~~~~ 405 (445)
.|.+.. + .-.-+..+++++++|+++|+.+. +++.. ..+.... ++..+...++..+.+
T Consensus 95 ~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l 174 (295)
T 1ydn_A 95 EIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSL 174 (295)
T ss_dssp EEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 777774 2 12356666777999999999986 44421 1233333 344455778877775
Q ss_pred CC
Q 013317 406 GA 407 (445)
Q Consensus 406 G~ 407 (445)
.+
T Consensus 175 ~D 176 (295)
T 1ydn_A 175 GD 176 (295)
T ss_dssp EE
T ss_pred cC
Confidence 44
No 140
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=85.58 E-value=3.1 Score=40.14 Aligned_cols=44 Identities=11% Similarity=0.105 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
++..+++++.++.++||++.-- +++.+++.++++.+ +|.|++=-
T Consensus 276 ~~~i~~i~~~~~~~ipVi~~GG-I~~~~da~~~l~~G-Ad~V~igr 319 (336)
T 1f76_A 276 TEIIRRLSLELNGRLPIIGVGG-IDSVIAAREKIAAG-ASLVQIYS 319 (336)
T ss_dssp HHHHHHHHHHHTTSSCEEEESS-CCSHHHHHHHHHHT-CSEEEESH
T ss_pred HHHHHHHHHHhCCCCCEEEECC-CCCHHHHHHHHHCC-CCEEEeeH
Confidence 3556788888843499866654 57799999999988 89998743
No 141
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=83.31 E-value=5.3 Score=35.24 Aligned_cols=110 Identities=17% Similarity=0.063 Sum_probs=67.4
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccC-HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D-~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G 358 (445)
+.+++.++ .+.+.+.++.+||=.+...+ .+..+++++.++...+|..+. +.++++++.+++.+ +|++ +-..-.
T Consensus 20 ~~~~~~~~-~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~--v~~~~~~~~a~~~G-ad~i-v~~~~~- 93 (205)
T 1wa3_A 20 SVEEAKEK-ALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGT--VTSVEQCRKAVESG-AEFI-VSPHLD- 93 (205)
T ss_dssp SHHHHHHH-HHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEES--CCSHHHHHHHHHHT-CSEE-ECSSCC-
T ss_pred CHHHHHHH-HHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecc--cCCHHHHHHHHHcC-CCEE-EcCCCC-
Confidence 56677765 45577788888874333323 345788888764336765543 35688888887754 7888 444321
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcccc
Q 013317 359 SVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
.++++.|+++|++++.+..+ .. -+..|...++..+++
T Consensus 94 -----~~~~~~~~~~g~~vi~g~~t---~~--e~~~a~~~Gad~vk~ 130 (205)
T 1wa3_A 94 -----EEISQFCKEKGVFYMPGVMT---PT--ELVKAMKLGHTILKL 130 (205)
T ss_dssp -----HHHHHHHHHHTCEEECEECS---HH--HHHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHcCCcEECCcCC---HH--HHHHHHHcCCCEEEE
Confidence 35777888999998765432 11 123344455555554
No 142
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=83.29 E-value=4.5 Score=43.44 Aligned_cols=42 Identities=7% Similarity=0.067 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
++...+++++.++ +||++--. +++++++.++++.+.+|+|.+
T Consensus 279 ~~~~~~~i~~~~~--~pvi~~G~-i~~~~~a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 279 TIPWVKLVKQVSK--KPVLGVGR-YTDPEKMIEIVTKGYADIIGC 320 (729)
T ss_dssp THHHHHHHHTTCS--SCEECCSC-CCCHHHHHHHHHTTSCSBEEE
T ss_pred cHHHHHHHHHHCC--CEEEEeCC-CCCHHHHHHHHHCCCCCEEEe
Confidence 4566678888887 99877665 467999999999999999984
No 143
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=80.27 E-value=6.5 Score=41.83 Aligned_cols=71 Identities=15% Similarity=0.140 Sum_probs=46.5
Q ss_pred CCcChHHHHHHHHHhhhcCCeeEEE----------C-C-C-Cc-cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHH
Q 013317 277 QKVSGDGLKNVYRSFISDHPIVSIE----------D-P-F-DQ-DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAI 342 (445)
Q Consensus 277 ~~~t~~~~i~~~~~~~~~~~i~~iE----------d-P-~-~~-~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i 342 (445)
.+|+.++.+++ .+.+++ .+.+|. . | + ++ ...+..+++++.++ +||++--. ++++++..+++
T Consensus 239 ~g~~~~~~~~~-~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~pvi~~G~-i~~~~~a~~~l 313 (690)
T 3k30_A 239 GGITREDIEGV-LRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTT--KPVVGVGR-FTSPDAMVRQI 313 (690)
T ss_dssp TSCCHHHHHHH-HHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCS--SCEEECSC-CCCHHHHHHHH
T ss_pred CCCCHHHHHHH-HHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcC--CeEEEeCC-CCCHHHHHHHH
Confidence 35777888876 455676 344332 1 1 1 11 12345566777777 88866544 46799999999
Q ss_pred hcCCCCEEEe
Q 013317 343 KEKTCNALLL 352 (445)
Q Consensus 343 ~~~a~d~v~i 352 (445)
+.+.+|.|.+
T Consensus 314 ~~g~~d~v~~ 323 (690)
T 3k30_A 314 KAGILDLIGA 323 (690)
T ss_dssp HTTSCSEEEE
T ss_pred HCCCcceEEE
Confidence 9999999983
No 144
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=79.35 E-value=22 Score=31.23 Aligned_cols=119 Identities=10% Similarity=0.015 Sum_probs=72.4
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCC---ccCHHHHHHHHHH-hCCceEEEeccccccCHHH-HHHHHhcCCCCEEEecc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFD---QDDWEHYAELTGK-IGRHVQIVGDDLLVTNPKR-VEKAIKEKTCNALLLKV 354 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~---~~D~~~~~~L~~~-~~~~~pI~gde~~~~~~~~-~~~~i~~~a~d~v~ik~ 354 (445)
+.++.++.+.++ .+ ++.+||.-+| ..-++..+++++. .+ +||..|-.+...... ++.+.+.+ +|++.+..
T Consensus 11 ~~~~~~~~~~~~-~~-~~diie~G~p~~~~~g~~~i~~ir~~~~~--~~i~~~~~~~~~~~~~~~~~~~~G-ad~v~v~~ 85 (211)
T 3f4w_A 11 TLPEAMVFMDKV-VD-DVDIIEVGTPFLIREGVNAIKAIKEKYPH--KEVLADAKIMDGGHFESQLLFDAG-ADYVTVLG 85 (211)
T ss_dssp CHHHHHHHHHHH-GG-GCSEEEECHHHHHHHTTHHHHHHHHHCTT--SEEEEEEEECSCHHHHHHHHHHTT-CSEEEEET
T ss_pred CHHHHHHHHHHh-hc-CccEEEeCcHHHHhccHHHHHHHHHhCCC--CEEEEEEEeccchHHHHHHHHhcC-CCEEEEeC
Confidence 567777775554 43 5888898642 3456778888887 35 888666443223444 55566555 57777743
Q ss_pred CccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCccccC
Q 013317 355 NQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTG 406 (445)
Q Consensus 355 ~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G 406 (445)
. .+-....++.+.++++|+++++.-...++... .+..+...++.++.+.
T Consensus 86 ~--~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~-~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 86 V--TDVLTIQSCIRAAKEAGKQVVVDMICVDDLPA-RVRLLEEAGADMLAVH 134 (211)
T ss_dssp T--SCHHHHHHHHHHHHHHTCEEEEECTTCSSHHH-HHHHHHHHTCCEEEEE
T ss_pred C--CChhHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHHcCCCEEEEc
Confidence 3 23355578888999999998764212333322 2344455567777653
No 145
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=79.34 E-value=10 Score=38.99 Aligned_cols=94 Identities=13% Similarity=0.184 Sum_probs=67.0
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCc-------------cccHHHHHHHHHHHHHcCC
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-------------IGSVTESIEAVKMAKRAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k-------------~GGit~a~~i~~~A~~~g~ 375 (445)
++..+++++..+ .++|++... + +.+.++.+++.+ +|+|.+=+.- ..-+|..+++++.|+.+|+
T Consensus 310 ~~~i~~ik~~~p-~~~viaGNV-a-T~e~a~~Li~aG-AD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~v 385 (556)
T 4af0_A 310 IEFIKWIKQTYP-KIDVIAGNV-V-TREQAAQLIAAG-ADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGI 385 (556)
T ss_dssp HHHHHHHHHHCT-TSEEEEEEE-C-SHHHHHHHHHHT-CSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTC
T ss_pred HHHHHHHHhhCC-cceEEeccc-c-CHHHHHHHHHcC-CCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCC
Confidence 566777777764 489988875 3 589999999887 6887755431 2458999999999999999
Q ss_pred cEEecCCCCCChhHHHHHHHhhhcCCccccCCCC
Q 013317 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGAPC 409 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~~ 409 (445)
+++.....--+++ +-.|+|+++.++..|++.
T Consensus 386 pvIADGGI~~sGD---i~KAlaaGAd~VMlGsll 416 (556)
T 4af0_A 386 PCIADGGIGNIGH---IAKALALGASAVMMGGLL 416 (556)
T ss_dssp CEEEESCCCSHHH---HHHHHHTTCSEEEESTTT
T ss_pred CEEecCCcCcchH---HHHHhhcCCCEEEEchhh
Confidence 9864443222222 334667789999998864
No 146
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=78.40 E-value=9 Score=35.43 Aligned_cols=97 Identities=13% Similarity=0.163 Sum_probs=74.5
Q ss_pred cChHHHHHHHHHhhhcCCeeEE-ECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCcc
Q 013317 279 VSGDGLKNVYRSFISDHPIVSI-EDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 357 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~i-EdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~ 357 (445)
.++.++.+.|.+. ...|..+ |+++-...++.++.+++.++ +||.--+. ..+...+.. ...-.+|++.+.....
T Consensus 61 ~~~~~iA~~y~~~--A~~IsVlTd~~~F~gs~~dL~~ir~~v~--lPvLrKDf-i~~~~qi~e-a~~~GAD~ilLi~a~l 134 (251)
T 1i4n_A 61 ASLEDFIRMYDEL--ADAISILTEKHYFKGDPAFVRAARNLTC--RPILAKDF-YIDTVQVKL-ASSVGADAILIIARIL 134 (251)
T ss_dssp CCHHHHHHHHHHH--CSEEEEECCCSSSCCCTHHHHHHHTTCC--SCEEEECC-CCSTHHHHH-HHHTTCSEEEEEGGGS
T ss_pred CCHHHHHHHHHHh--CCceEEEecccccCCCHHHHHHHHHhCC--CCEEEeeC-CCCHHHHHH-HHHcCCCEEEEecccC
Confidence 4677777776654 5667765 66677778899999999988 99977775 466677777 4556789999998864
Q ss_pred ccHHHHHHHHHHHHHcCCcEEecCC
Q 013317 358 GSVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 358 GGit~a~~i~~~A~~~g~~~~~~~~ 382 (445)
. -....+..+.|++.|+.+++-..
T Consensus 135 ~-~~~l~~l~~~a~~lGl~~lvEv~ 158 (251)
T 1i4n_A 135 T-AEQIKEIYEAAEELGMDSLVEVH 158 (251)
T ss_dssp C-HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred C-HHHHHHHHHHHHHcCCeEEEEeC
Confidence 3 36788899999999999987753
No 147
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=77.61 E-value=8.8 Score=37.87 Aligned_cols=87 Identities=18% Similarity=0.256 Sum_probs=61.8
Q ss_pred CCeeEEECCCCccCHHHHHHHHHHh---CCceEEEeccccccCHHHHHHHHh--cCCCCEEEeccCcccc----HHHHHH
Q 013317 295 HPIVSIEDPFDQDDWEHYAELTGKI---GRHVQIVGDDLLVTNPKRVEKAIK--EKTCNALLLKVNQIGS----VTESIE 365 (445)
Q Consensus 295 ~~i~~iEdP~~~~D~~~~~~L~~~~---~~~~pI~gde~~~~~~~~~~~~i~--~~a~d~v~ik~~k~GG----it~a~~ 365 (445)
..|.=+-=| ..++-+.+.++++++ +.++|+++|=.| +.+-+.+.++ ..++|-+.|.++.+|. -....+
T Consensus 52 ~eiVRvaVp-~~~~A~al~~I~~~l~~~~~~vPLVADiHF--~~~~al~a~~~~a~~~dkiRINPGNig~~~k~~e~~~~ 128 (406)
T 4g9p_A 52 SEIVRLTVN-DEEAAKAVPEIKRRLLAEGVEVPLVGDFHF--NGHLLLRKYPKMAEALDKFRINPGTLGRGRHKDEHFAE 128 (406)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECCS--SHHHHHHHCHHHHHHCSEEEECTTSSCSTHHHHHHHHH
T ss_pred CCEEEEecC-CHHHHHhHHHHHHHHHhcCCCCceEeeecc--cHHHHHHHHHHHHhHHhhcccCccccCccccHHHHHHH
Confidence 346666655 456778888888872 223999999653 4444433222 2468999999999984 355778
Q ss_pred HHHHHHHcCCcEEecCCCC
Q 013317 366 AVKMAKRAGWGVMASHRSG 384 (445)
Q Consensus 366 i~~~A~~~g~~~~~~~~~~ 384 (445)
+++.|+.+|+++-+|-++|
T Consensus 129 vv~~ak~~~~pIRIGVN~G 147 (406)
T 4g9p_A 129 MIRIAMDLGKPVRIGANWG 147 (406)
T ss_dssp HHHHHHHHTCCEEEEEEGG
T ss_pred HHHHHHHccCCceeccccc
Confidence 9999999999998887655
No 148
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=74.93 E-value=10 Score=35.96 Aligned_cols=43 Identities=7% Similarity=-0.031 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
++..+++++.+ .++||++.-- +++.+++.+++..+ +|.|++=-
T Consensus 232 ~~~i~~v~~~~-~~ipvi~~GG-I~~~~da~~~l~~G-Ad~V~ig~ 274 (314)
T 2e6f_A 232 LANVNAFYRRC-PDKLVFGCGG-VYSGEDAFLHILAG-ASMVQVGT 274 (314)
T ss_dssp HHHHHHHHHHC-TTSEEEEESS-CCSHHHHHHHHHHT-CSSEEECH
T ss_pred HHHHHHHHHhc-CCCCEEEECC-CCCHHHHHHHHHcC-CCEEEEch
Confidence 56778888887 2399866554 56799999999887 89988743
No 149
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=70.44 E-value=42 Score=32.22 Aligned_cols=125 Identities=11% Similarity=0.052 Sum_probs=79.4
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEEC--CCC-ccCHHHHHHHHHH------hCCceEEEeccccccCHHHHHHHHhcCCCC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIED--PFD-QDDWEHYAELTGK------IGRHVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEd--P~~-~~D~~~~~~L~~~------~~~~~pI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
.++.++.++++...+++.++.+||= |.. ++|++..+++++. .+ .+.+++-- .+..+++.+++.+ +|
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~i~~l~---~~~~~i~~a~~~g-~~ 111 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTE-RIEILGFV---DGNKTVDWIKDSG-AK 111 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGG-GEEEEEES---STTHHHHHHHHHT-CC
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCC-CCeEEEEc---cchhhHHHHHHCC-CC
Confidence 3678888887440578899999997 553 6777888888873 32 35665542 2334888887765 47
Q ss_pred EEEeccCc-------------cccHHHHHHHHHHHHHcCCcEEecCCC----CCChhHH---HHHHHhhhcCCccccCC
Q 013317 349 ALLLKVNQ-------------IGSVTESIEAVKMAKRAGWGVMASHRS----GETEDTF---IADLSVGLATGQIKTGA 407 (445)
Q Consensus 349 ~v~ik~~k-------------~GGit~a~~i~~~A~~~g~~~~~~~~~----~et~~~~---~~~la~a~~~~~~~~G~ 407 (445)
.|.+=..- -.-+..+.++++.|+++|+.+.++... +.+.... .+..+...++..+.+.+
T Consensus 112 ~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~D 190 (337)
T 3ble_A 112 VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPD 190 (337)
T ss_dssp EEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 76654321 113457778889999999998766532 1112233 33445556777776555
No 150
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=70.38 E-value=22 Score=34.11 Aligned_cols=147 Identities=12% Similarity=0.151 Sum_probs=88.7
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC---ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhc---CCCCEEE
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD---QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKE---KTCNALL 351 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~---~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~---~a~d~v~ 351 (445)
.++.++.++++ +.|.+.++..||=-++ ++|++..+++++..+ ++.+++= ...+..++++.++. -.++.|.
T Consensus 24 ~~~~~~Kl~ia-~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~-~~~i~~l--~r~~~~~i~~a~~al~~ag~~~v~ 99 (325)
T 3eeg_A 24 QLNTEEKIIVA-KALDELGVDVIEAGFPVSSPGDFNSVVEITKAVT-RPTICAL--TRAKEADINIAGEALRFAKRSRIH 99 (325)
T ss_dssp -CCTTHHHHHH-HHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCC-SSEEEEE--CCSCHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCHHHHHHHH-HHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCC-CCEEEEe--ecCCHHHHHHHHHhhcccCCCEEE
Confidence 46778888874 5578889999997443 557777888887653 3555332 12357788776654 1344444
Q ss_pred e-------------ccCccccHHHHHHHHHHHHHcCCcEEecCCC-CCChhHHH---HHHHhhhcCCccccCCCCCchhH
Q 013317 352 L-------------KVNQIGSVTESIEAVKMAKRAGWGVMASHRS-GETEDTFI---ADLSVGLATGQIKTGAPCRSERL 414 (445)
Q Consensus 352 i-------------k~~k~GGit~a~~i~~~A~~~g~~~~~~~~~-~et~~~~~---~~la~a~~~~~~~~G~~~~~er~ 414 (445)
+ +.++--.+..+.+++++|+++|+.+.+++.. +.+..... +..+...++..+.+.+-.+.-.=
T Consensus 100 i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P 179 (325)
T 3eeg_A 100 TGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLP 179 (325)
T ss_dssp EEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCH
T ss_pred EEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCH
Confidence 3 3334456677788999999999999887732 23333333 34445558888876664433333
Q ss_pred HHHHHHHH-HHHHhC
Q 013317 415 AKYNQLLR-IEEELG 428 (445)
Q Consensus 415 ~k~n~ll~-i~~~l~ 428 (445)
..+.++++ +-+.+.
T Consensus 180 ~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 180 WQYGERIKYLMDNVS 194 (325)
T ss_dssp HHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHhCC
Confidence 33444443 344443
No 151
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=68.38 E-value=87 Score=30.24 Aligned_cols=91 Identities=18% Similarity=0.202 Sum_probs=65.7
Q ss_pred HHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHH
Q 013317 282 DGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 361 (445)
Q Consensus 282 ~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit 361 (445)
.+-++.+.+.++++++.++=+|+++++.+-+.++ .+ -..| |-.. ++|..=++.+. +.---|.+|-+..+++.
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~---vd-~lkI-gAr~-~~n~~LL~~va--~~~kPVilk~G~~~tl~ 227 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY---AD-IIQI-GARN-AQNFRLLSKAG--SYNKPVLLKRGFMNTIE 227 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH---CS-EEEE-CGGG-TTCHHHHHHHH--TTCSCEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh---CC-EEEE-Cccc-ccCHHHHHHHH--ccCCcEEEcCCCCCCHH
Confidence 4556667888889999999999999988887776 33 1344 4433 35544455554 34568889999999999
Q ss_pred HHHHHHHHHHHcCC-cEEec
Q 013317 362 ESIEAVKMAKRAGW-GVMAS 380 (445)
Q Consensus 362 ~a~~i~~~A~~~g~-~~~~~ 380 (445)
++..+++.+.+.|- .+++-
T Consensus 228 ei~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 228 EFLLSAEYIANSGNTKIILC 247 (350)
T ss_dssp HHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 99999999988874 55553
No 152
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=66.93 E-value=13 Score=37.57 Aligned_cols=97 Identities=12% Similarity=0.243 Sum_probs=73.7
Q ss_pred CcChHHHHHHHHHhhhcCCeeEE-ECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCc
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSI-EDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 356 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~i-EdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k 356 (445)
..++.++.+.|.+- .-.|.-+ |+++-...++.++++++.++ +||.--+. ..++..+.+ ...-.+|+|.+....
T Consensus 67 ~~~~~~iA~~y~~~--A~~IsvLTd~~~F~gs~~dL~~vr~~v~--lPvLrKDF-I~d~~Qi~e-a~~~GAD~ILLi~a~ 140 (452)
T 1pii_A 67 DFDPARIAAIYKHY--ASAISVLTDEKYFQGSFNFLPIVSQIAP--QPILCKDF-IIDPYQIYL-ARYYQADACLLMLSV 140 (452)
T ss_dssp SCCHHHHHHHHTTT--CSEEEEECCSTTTCCCTTHHHHHHHHCC--SCEEEESC-CCSHHHHHH-HHHTTCSEEEEETTT
T ss_pred CCCHHHHHHHHHhh--CcEEEEEecccccCCCHHHHHHHHHhcC--CCeEEEec-cCCHHHHHH-HHHcCCCEEEEEccc
Confidence 35677776665442 3345544 77777788899999999998 99977775 567787777 456678999999987
Q ss_pred cccHHHHHHHHHHHHHcCCcEEecC
Q 013317 357 IGSVTESIEAVKMAKRAGWGVMASH 381 (445)
Q Consensus 357 ~GGit~a~~i~~~A~~~g~~~~~~~ 381 (445)
.. -.++.+..+.|+..|+.+++-.
T Consensus 141 l~-~~~l~~l~~~a~~lgm~~LvEv 164 (452)
T 1pii_A 141 LD-DDQYRQLAAVAHSLEMGVLTEV 164 (452)
T ss_dssp CC-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred CC-HHHHHHHHHHHHHcCCeEEEEe
Confidence 65 3778999999999999998775
No 153
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=66.53 E-value=37 Score=32.19 Aligned_cols=123 Identities=13% Similarity=0.059 Sum_probs=72.8
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCC--Cc------cCHH-HHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPF--DQ------DDWE-HYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~--~~------~D~~-~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
.++.++.++++ +.+++.++.+||--+ .+ .|.+ -++.+++.. ++.+.+ + +.+..+++..++.+ ++
T Consensus 24 ~~~~e~k~~i~-~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~--~~~~~~--l-~~~~~~i~~a~~~g-~~ 96 (307)
T 1ydo_A 24 WIATEDKITWI-NQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREK--GVTYAA--L-VPNQRGLENALEGG-IN 96 (307)
T ss_dssp CCCHHHHHHHH-HHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCT--TCEEEE--E-CCSHHHHHHHHHHT-CS
T ss_pred CCCHHHHHHHH-HHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcC--CCeEEE--E-eCCHHhHHHHHhCC-cC
Confidence 46788888874 567889999999742 11 2433 223333222 255533 1 24678899988875 57
Q ss_pred EEEeccCcc-------------ccHHHHHHHHHHHHHcCCcEE------ecCC-CCCChhHHHHHH---HhhhcCCcccc
Q 013317 349 ALLLKVNQI-------------GSVTESIEAVKMAKRAGWGVM------ASHR-SGETEDTFIADL---SVGLATGQIKT 405 (445)
Q Consensus 349 ~v~ik~~k~-------------GGit~a~~i~~~A~~~g~~~~------~~~~-~~et~~~~~~~l---a~a~~~~~~~~ 405 (445)
.+.+-.+-. .-+..+.+++++|+++|+.+. +++- .+.+.....+.+ +...++..+.+
T Consensus 97 ~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l 176 (307)
T 1ydo_A 97 EACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSL 176 (307)
T ss_dssp EEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEE
T ss_pred EEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 777543211 124556888999999999874 2221 112334444444 45667877775
Q ss_pred CC
Q 013317 406 GA 407 (445)
Q Consensus 406 G~ 407 (445)
.+
T Consensus 177 ~D 178 (307)
T 1ydo_A 177 GD 178 (307)
T ss_dssp EC
T ss_pred cC
Confidence 55
No 154
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=64.71 E-value=21 Score=33.39 Aligned_cols=95 Identities=14% Similarity=0.152 Sum_probs=67.1
Q ss_pred CcChHHHHHHHHHhhhcCC---eeEE-ECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec
Q 013317 278 KVSGDGLKNVYRSFISDHP---IVSI-EDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~---i~~i-EdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
..++.++.+.| ++.+ |..+ |+++-....+.++.+++.++ +||.--+. ..++.++..+... .+|+|.+.
T Consensus 78 ~~dp~~~A~~y----~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~--lPVl~Kdf-i~d~~qi~ea~~~-GAD~VlLi 149 (272)
T 3tsm_A 78 DFDPPALAKAY----EEGGAACLSVLTDTPSFQGAPEFLTAARQACS--LPALRKDF-LFDPYQVYEARSW-GADCILII 149 (272)
T ss_dssp SCCHHHHHHHH----HHTTCSEEEEECCSTTTCCCHHHHHHHHHTSS--SCEEEESC-CCSTHHHHHHHHT-TCSEEEEE
T ss_pred CCCHHHHHHHH----HHCCCCEEEEeccccccCCCHHHHHHHHHhcC--CCEEECCc-cCCHHHHHHHHHc-CCCEEEEc
Confidence 35666655443 3444 4333 66666678899999999988 99844444 4567888777554 46888888
Q ss_pred cCccccHHHHHHHHHHHHHcCCcEEecC
Q 013317 354 VNQIGSVTESIEAVKMAKRAGWGVMASH 381 (445)
Q Consensus 354 ~~k~GGit~a~~i~~~A~~~g~~~~~~~ 381 (445)
..-.. -.++.++.+.|+..|+.+++..
T Consensus 150 ~a~L~-~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 150 MASVD-DDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp TTTSC-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccC-HHHHHHHHHHHHHcCCeEEEEe
Confidence 77653 4678899999999999987655
No 155
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=64.60 E-value=10 Score=34.48 Aligned_cols=44 Identities=9% Similarity=0.003 Sum_probs=33.9
Q ss_pred ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec
Q 013317 306 QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 306 ~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
..+++..+++++.++ +||+..-- +++++++.++++.+ +|.|.+-
T Consensus 65 ~~~~~~i~~i~~~~~--ipvi~~Gg-i~~~~~~~~~l~~G-ad~V~ig 108 (247)
T 3tdn_A 65 GYDTEMIRFVRPLTT--LPIIASGG-AGKMEHFLEAFLRG-ADKVSIN 108 (247)
T ss_dssp CCCHHHHHHHGGGCC--SCEEEESC-CCSHHHHHHHHHTT-CSEECCS
T ss_pred cccHHHHHHHHHhCC--CCEEEeCC-CCCHHHHHHHHHcC-CCeeehh
Confidence 346888899999887 88855544 46799999999887 7887653
No 156
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=64.24 E-value=65 Score=30.87 Aligned_cols=127 Identities=14% Similarity=0.106 Sum_probs=80.7
Q ss_pred CCcChHHHHHHHHHhhhcCCeeEEEC------CC--------CccCHHHHHHHHHHhCCceEEE--eccccccCHHHHHH
Q 013317 277 QKVSGDGLKNVYRSFISDHPIVSIED------PF--------DQDDWEHYAELTGKIGRHVQIV--GDDLLVTNPKRVEK 340 (445)
Q Consensus 277 ~~~t~~~~i~~~~~~~~~~~i~~iEd------P~--------~~~D~~~~~~L~~~~~~~~pI~--gde~~~~~~~~~~~ 340 (445)
..++.++.++++ +.+++.++..||= |. ..++++.++++++..+ +++|+ +.-. ..+.+++++
T Consensus 25 ~~~~~e~k~~i~-~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~-~~~i~~l~~p~-~~~~~~i~~ 101 (345)
T 1nvm_A 25 HQYTLDDVRAIA-RALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEIS-HAQIATLLLPG-IGSVHDLKN 101 (345)
T ss_dssp TCCCHHHHHHHH-HHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCS-SSEEEEEECBT-TBCHHHHHH
T ss_pred CCCCHHHHHHHH-HHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCC-CCEEEEEecCC-cccHHHHHH
Confidence 346788888875 4567789999998 32 2567788888887643 36653 2211 235778888
Q ss_pred HHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecC-CCCCChhHH---HHHHHhhhcCCccccCCC
Q 013317 341 AIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASH-RSGETEDTF---IADLSVGLATGQIKTGAP 408 (445)
Q Consensus 341 ~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~-~~~et~~~~---~~~la~a~~~~~~~~G~~ 408 (445)
+.+. .+|.+.+-..- --+.++.+.++.|+++|+.+...- +...+.... ++..+...++..+.+.+-
T Consensus 102 a~~a-Gvd~v~I~~~~-s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT 171 (345)
T 1nvm_A 102 AYQA-GARVVRVATHC-TEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADS 171 (345)
T ss_dssp HHHH-TCCEEEEEEET-TCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECT
T ss_pred HHhC-CcCEEEEEEec-cHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCC
Confidence 8776 46777765321 123477888999999999876553 223344333 445556667777765443
No 157
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=64.02 E-value=19 Score=33.91 Aligned_cols=47 Identities=9% Similarity=0.098 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCcc
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI 357 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~ 357 (445)
++..+++++.++.++||++.-- +++++++.+++..+ +|.|++=-.-.
T Consensus 229 ~~~i~~v~~~~~~~ipvi~~GG-I~~~~da~~~l~~G-Ad~V~vg~~~l 275 (311)
T 1jub_A 229 LANVRAFYTRLKPEIQIIGTGG-IETGQDAFEHLLCG-ATMLQIGTALH 275 (311)
T ss_dssp HHHHHHHHTTSCTTSEEEEESS-CCSHHHHHHHHHHT-CSEEEECHHHH
T ss_pred HHHHHHHHHhcCCCCCEEEECC-CCCHHHHHHHHHcC-CCEEEEchHHH
Confidence 5666778888733499866554 56799999999887 89998764433
No 158
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=63.76 E-value=36 Score=32.06 Aligned_cols=123 Identities=13% Similarity=0.078 Sum_probs=73.6
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCC--Cc------cCHHH-HHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPF--DQ------DDWEH-YAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~--~~------~D~~~-~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
.++.++.++++ +.+++.++.+||.-. .+ .|.+. ++.+++.. ++++++= +.+..++++.++.+ ++
T Consensus 26 ~~~~e~k~~i~-~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~l---~~~~~~i~~a~~aG-~~ 98 (302)
T 2ftp_A 26 PIEVADKIRLV-DDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRP--GVTYAAL---APNLKGFEAALESG-VK 98 (302)
T ss_dssp CCCHHHHHHHH-HHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCT--TSEEEEE---CCSHHHHHHHHHTT-CC
T ss_pred CCCHHHHHHHH-HHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcC--CCEEEEE---eCCHHHHHHHHhCC-cC
Confidence 46788888874 567889999999743 11 24332 23333332 3676542 24689999999876 56
Q ss_pred EEEecc-C------------ccccHHHHHHHHHHHHHcCCcEE--ecCCC-----CCChhHHHHHHH---hhhcCCcccc
Q 013317 349 ALLLKV-N------------QIGSVTESIEAVKMAKRAGWGVM--ASHRS-----GETEDTFIADLS---VGLATGQIKT 405 (445)
Q Consensus 349 ~v~ik~-~------------k~GGit~a~~i~~~A~~~g~~~~--~~~~~-----~et~~~~~~~la---~a~~~~~~~~ 405 (445)
.|.+-. . .---+..+.+++++|+++|+.+. +++.. +.+.....+.++ ...++..+.+
T Consensus 99 ~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l 178 (302)
T 2ftp_A 99 EVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSL 178 (302)
T ss_dssp EEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 777622 1 11234556888999999999873 22211 123444444443 4667777765
Q ss_pred CC
Q 013317 406 GA 407 (445)
Q Consensus 406 G~ 407 (445)
.+
T Consensus 179 ~D 180 (302)
T 2ftp_A 179 GD 180 (302)
T ss_dssp EE
T ss_pred eC
Confidence 44
No 159
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=61.12 E-value=34 Score=30.92 Aligned_cols=111 Identities=10% Similarity=0.007 Sum_probs=68.3
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEec--------ccccc-CHHHHHHHHhcCCCCEE
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGD--------DLLVT-NPKRVEKAIKEKTCNAL 350 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gd--------e~~~~-~~~~~~~~i~~~a~d~v 350 (445)
++..+.++ .+..++.+...|+= ...+..+++++.++ +||+|. +.+++ +.+++..+++.+ +|+|
T Consensus 34 ~~~~~~~~-A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~--~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~G-ad~V 105 (232)
T 3igs_A 34 KPEIVAAM-ALAAEQAGAVAVRI----EGIDNLRMTRSLVS--VPIIGIIKRDLDESPVRITPFLDDVDALAQAG-AAII 105 (232)
T ss_dssp SHHHHHHH-HHHHHHTTCSEEEE----ESHHHHHHHHTTCC--SCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEE
T ss_pred CcchHHHH-HHHHHHCCCeEEEE----CCHHHHHHHHHhcC--CCEEEEEeecCCCcceEeCccHHHHHHHHHcC-CCEE
Confidence 34555554 45567777666662 46788999999988 998751 12232 345677766554 7888
Q ss_pred EeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcc
Q 013317 351 LLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQI 403 (445)
Q Consensus 351 ~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~ 403 (445)
.++......-....++++.+++.|+.+++.....+ -+.-+...++.++
T Consensus 106 ~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~e-----ea~~a~~~Gad~I 153 (232)
T 3igs_A 106 AVDGTARQRPVAVEALLARIHHHHLLTMADCSSVD-----DGLACQRLGADII 153 (232)
T ss_dssp EEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSHH-----HHHHHHHTTCSEE
T ss_pred EECccccCCHHHHHHHHHHHHHCCCEEEEeCCCHH-----HHHHHHhCCCCEE
Confidence 88876432224566677777888988876553211 1233344566665
No 160
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=61.11 E-value=7.8 Score=37.00 Aligned_cols=62 Identities=15% Similarity=0.391 Sum_probs=40.6
Q ss_pred HHhhhcCCeeEE-------ECCC-CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC
Q 013317 289 RSFISDHPIVSI-------EDPF-DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 289 ~~~~~~~~i~~i-------EdP~-~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
.+.+++.++.+| ++.. .+-+++..+++++ + +||+++-- +.+++++.++++...+|.|++=-.
T Consensus 146 a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~--ipVi~~Gg-I~s~~da~~~l~~~gad~V~iGR~ 215 (318)
T 1vhn_A 146 YRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--R--IPTFVSGD-IFTPEDAKRALEESGCDGLLVARG 215 (318)
T ss_dssp HHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC--S--SCEEEESS-CCSHHHHHHHHHHHCCSEEEESGG
T ss_pred HHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc--C--CeEEEECC-cCCHHHHHHHHHcCCCCEEEECHH
Confidence 445677776666 2221 2235555555655 4 88866654 467999999999778999987543
No 161
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=60.82 E-value=30 Score=33.73 Aligned_cols=45 Identities=16% Similarity=0.138 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
++..+++++.++.++||++.-- +.+.+++.++++.+ +|.|++=-.
T Consensus 285 ~~~v~~i~~~v~~~ipvI~~GG-I~s~~da~~~l~~G-Ad~V~vgra 329 (367)
T 3zwt_A 285 TQTIREMYALTQGRVPIIGVGG-VSSGQDALEKIRAG-ASLVQLYTA 329 (367)
T ss_dssp HHHHHHHHHHTTTCSCEEEESS-CCSHHHHHHHHHHT-CSEEEESHH
T ss_pred HHHHHHHHHHcCCCceEEEECC-CCCHHHHHHHHHcC-CCEEEECHH
Confidence 4677888888844499866654 56799999999977 699997654
No 162
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=60.12 E-value=82 Score=30.24 Aligned_cols=67 Identities=10% Similarity=0.166 Sum_probs=44.8
Q ss_pred ChHHHHHHHHHhhhcCCeeEEE-CC--------------CCccCHHHHHHHHHHh-CCceEEEeccccccCHHHHHHHHh
Q 013317 280 SGDGLKNVYRSFISDHPIVSIE-DP--------------FDQDDWEHYAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIK 343 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iE-dP--------------~~~~D~~~~~~L~~~~-~~~~pI~gde~~~~~~~~~~~~i~ 343 (445)
+.++..++ .+.+++.++.+|. .+ .++-+++..+++++.+ + +||++.-- +++++++.++++
T Consensus 142 ~~~~~~~~-a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~--iPVianGg-I~s~eda~~~l~ 217 (350)
T 3b0p_A 142 TYRGLAQS-VEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQ--LTFVTNGG-IRSLEEALFHLK 217 (350)
T ss_dssp CHHHHHHH-HHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTT--SEEEEESS-CCSHHHHHHHHT
T ss_pred cHHHHHHH-HHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCC--CeEEEECC-cCCHHHHHHHHh
Confidence 34455655 4456677755432 11 1234788889999988 6 88855443 467999999997
Q ss_pred cCCCCEEEe
Q 013317 344 EKTCNALLL 352 (445)
Q Consensus 344 ~~a~d~v~i 352 (445)
+ +|.|++
T Consensus 218 -G-aD~V~i 224 (350)
T 3b0p_A 218 -R-VDGVML 224 (350)
T ss_dssp -T-SSEEEE
T ss_pred -C-CCEEEE
Confidence 5 999986
No 163
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=59.06 E-value=73 Score=31.21 Aligned_cols=94 Identities=16% Similarity=0.151 Sum_probs=59.1
Q ss_pred cChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G 358 (445)
+.. +.++.+.+..+++++.++=+|+++++.+-..++ .+ -+.|.+-+ +++. ++.+.+. +.--.|++|-+..+
T Consensus 190 l~~-egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd-~lkIgs~~--~~n~-~LL~~~a-~~gkPVilk~G~~~ 260 (385)
T 3nvt_A 190 LGL-EGLKILKRVSDEYGLGVISEIVTPADIEVALDY---VD-VIQIGARN--MQNF-ELLKAAG-RVDKPILLKRGLSA 260 (385)
T ss_dssp CTH-HHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT---CS-EEEECGGG--TTCH-HHHHHHH-TSSSCEEEECCTTC
T ss_pred CCH-HHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh---CC-EEEECccc--ccCH-HHHHHHH-ccCCcEEEecCCCC
Confidence 444 444556777788999999999998887766554 22 13333333 2453 3333332 23446777877777
Q ss_pred cHHHHHHHHHHHHHcCC-cEEecC
Q 013317 359 SVTESIEAVKMAKRAGW-GVMASH 381 (445)
Q Consensus 359 Git~a~~i~~~A~~~g~-~~~~~~ 381 (445)
++.++..+++.+++.|- ++++-|
T Consensus 261 t~~e~~~Ave~i~~~Gn~~i~L~~ 284 (385)
T 3nvt_A 261 TIEEFIGAAEYIMSQGNGKIILCE 284 (385)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEE
Confidence 88888888888777764 455555
No 164
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=58.95 E-value=28 Score=32.78 Aligned_cols=87 Identities=11% Similarity=0.086 Sum_probs=56.5
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCcccc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGS 359 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GG 359 (445)
..++-++.+.+..+++++.++=+|+++++.+-+.++ .+ -+.|-+-+ ++|..-++.+- +.---|.+|-++..+
T Consensus 72 g~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~---vd-~lkIgA~~--~~n~~LLr~~a--~~gkPVilK~G~~~t 143 (288)
T 3tml_A 72 GMDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV---VD-VLQTPAFL--CRQTDFIHACA--RSGKPVNIKKGQFLA 143 (288)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH---CS-EEEECGGG--TTCHHHHHHHH--TSSSCEEEECCTTCC
T ss_pred CHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh---CC-EEEECccc--ccCHHHHHHHH--ccCCcEEEeCCCCCC
Confidence 345667777888888999999999999888777665 22 13333333 24444344332 334467777777667
Q ss_pred HHHHHHHHHHHHHcC
Q 013317 360 VTESIEAVKMAKRAG 374 (445)
Q Consensus 360 it~a~~i~~~A~~~g 374 (445)
+.++..+++.+.+.|
T Consensus 144 ~~e~~~ave~i~~~G 158 (288)
T 3tml_A 144 PHDMKNVIDKARDAA 158 (288)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC
Confidence 777777777776654
No 165
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=58.75 E-value=52 Score=30.38 Aligned_cols=92 Identities=17% Similarity=0.157 Sum_probs=66.8
Q ss_pred HHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHH
Q 013317 282 DGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 361 (445)
Q Consensus 282 ~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit 361 (445)
.+-++.+.+.++++++.++=+|+++.+.+-+.++ .+ -..|-+-+ +++..=++.+.+ .---|.+|-+..|++.
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd-~~kIga~~--~~n~~ll~~~a~--~~kPV~lk~G~~~t~~ 144 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKY---SD-ILQIGARN--SQNFELLKEVGK--VENPVLLKRGMGNTIQ 144 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH---CS-EEEECGGG--TTCHHHHHHHTT--SSSCEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh---CC-EEEECccc--ccCHHHHHHHHh--cCCcEEEecCCCCCHH
Confidence 4445566777888999999999999887777766 32 14444443 355444555543 4567889999999999
Q ss_pred HHHHHHHHHHHcCC-cEEecC
Q 013317 362 ESIEAVKMAKRAGW-GVMASH 381 (445)
Q Consensus 362 ~a~~i~~~A~~~g~-~~~~~~ 381 (445)
++..+++.++..|- .+++-|
T Consensus 145 e~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 145 ELLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp HHHHHHHHHHTTTCCCEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEEE
Confidence 99999999999875 566655
No 166
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=56.63 E-value=88 Score=30.11 Aligned_cols=92 Identities=11% Similarity=0.150 Sum_probs=56.0
Q ss_pred HHHHHHHHHHh-CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCc-------------cccHHHHHHHHHHHHHcC
Q 013317 309 WEHYAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-------------IGSVTESIEAVKMAKRAG 374 (445)
Q Consensus 309 ~~~~~~L~~~~-~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k-------------~GGit~a~~i~~~A~~~g 374 (445)
++..++|++.+ + +||+... +.++++++.+++.+ +|+|.+-..- ...++...++.+.++..+
T Consensus 149 ~~~i~~lr~~~~~--~~vi~g~--v~t~e~A~~a~~aG-aD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ 223 (351)
T 2c6q_A 149 VEFVKDVRKRFPQ--HTIMAGN--VVTGEMVEELILSG-ADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLK 223 (351)
T ss_dssp HHHHHHHHHHCTT--SEEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCC--CeEEEEe--CCCHHHHHHHHHhC-CCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcC
Confidence 45678888887 5 8875332 35689999888876 7888663210 112344566777777778
Q ss_pred CcEEecCCCCCChhHHHHHHHhhhcCCccccCCC
Q 013317 375 WGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 375 ~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~ 408 (445)
++++.... .-+......-| ++++..+..|.+
T Consensus 224 ipvIa~GG-I~~g~di~kAl--alGA~~V~vG~~ 254 (351)
T 2c6q_A 224 GHIISDGG-CSCPGDVAKAF--GAGADFVMLGGM 254 (351)
T ss_dssp CEEEEESC-CCSHHHHHHHH--HTTCSEEEESTT
T ss_pred CcEEEeCC-CCCHHHHHHHH--HcCCCceeccHH
Confidence 99876553 33433333333 345666655554
No 167
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=56.36 E-value=72 Score=29.69 Aligned_cols=92 Identities=16% Similarity=0.109 Sum_probs=66.2
Q ss_pred HHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHH
Q 013317 282 DGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 361 (445)
Q Consensus 282 ~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit 361 (445)
.+-++.+.+.++++++.++=+|+++++.+-+.++ .+ -..| |-.. +++..=++.+.. .--.|++|-+..+++.
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd-~~kI-gs~~-~~n~~ll~~~a~--~~kPV~lk~G~~~t~~ 159 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY---AD-MLQI-GARN-MQNFPLLREVGR--SGKPVLLKRGFGNTVE 159 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH---CS-EEEE-CGGG-TTCHHHHHHHHH--HTCCEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh---CC-eEEE-Cccc-ccCHHHHHHHHc--cCCeEEEcCCCCCCHH
Confidence 3455666788889999999999999988877776 33 1344 4433 355444444443 3457889999988999
Q ss_pred HHHHHHHHHHHcCC-cEEecC
Q 013317 362 ESIEAVKMAKRAGW-GVMASH 381 (445)
Q Consensus 362 ~a~~i~~~A~~~g~-~~~~~~ 381 (445)
++..+++.++..|- .+++-|
T Consensus 160 ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 160 ELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp HHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEe
Confidence 99999999998875 666655
No 168
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=55.99 E-value=46 Score=31.19 Aligned_cols=124 Identities=16% Similarity=0.091 Sum_probs=72.6
Q ss_pred CCcChHHHHHHHHHhhhcCCeeEEECCC-------Cc-cCHH-HHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCC
Q 013317 277 QKVSGDGLKNVYRSFISDHPIVSIEDPF-------DQ-DDWE-HYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTC 347 (445)
Q Consensus 277 ~~~t~~~~i~~~~~~~~~~~i~~iEdP~-------~~-~D~~-~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~ 347 (445)
..++.++.++++ +.+++.++.+||=-. |. .|.+ -++.+++.-+ +++.+- +.+..+++++++.+ +
T Consensus 22 ~~~~~e~k~~i~-~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~--~~~~~l---~~~~~~i~~a~~ag-~ 94 (298)
T 2cw6_A 22 NIVSTPVKIKLI-DMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPG--INYPVL---TPNLKGFEAAVAAG-A 94 (298)
T ss_dssp SCCCHHHHHHHH-HHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTT--CBCCEE---CCSHHHHHHHHHTT-C
T ss_pred CCCCHHHHHHHH-HHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCC--CEEEEE---cCCHHhHHHHHHCC-C
Confidence 346888998875 557889999999732 10 3443 2233332112 444332 23588899988875 4
Q ss_pred CEEEeccCc-------------cccHHHHHHHHHHHHHcCCcEE------ecCC-CCCChhHH---HHHHHhhhcCCccc
Q 013317 348 NALLLKVNQ-------------IGSVTESIEAVKMAKRAGWGVM------ASHR-SGETEDTF---IADLSVGLATGQIK 404 (445)
Q Consensus 348 d~v~ik~~k-------------~GGit~a~~i~~~A~~~g~~~~------~~~~-~~et~~~~---~~~la~a~~~~~~~ 404 (445)
+.+.+-..- -.-+..+.+++++|+++|+.+. +++- .+.+.... .+..+...++..+.
T Consensus 95 ~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 174 (298)
T 2cw6_A 95 KEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEIS 174 (298)
T ss_dssp SEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 677664321 1234567888999999999974 2221 01223333 34445666887776
Q ss_pred cCC
Q 013317 405 TGA 407 (445)
Q Consensus 405 ~G~ 407 (445)
+.+
T Consensus 175 l~D 177 (298)
T 2cw6_A 175 LGD 177 (298)
T ss_dssp EEE
T ss_pred ecC
Confidence 444
No 169
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=54.64 E-value=1.4e+02 Score=27.78 Aligned_cols=82 Identities=15% Similarity=0.120 Sum_probs=48.6
Q ss_pred HHHHHHHhCCceEEEecccc--ccCHHHHHHHHhcCCCCEEEeccCccccHH-------HHHHHHHHHHHcCCcEEecCC
Q 013317 312 YAELTGKIGRHVQIVGDDLL--VTNPKRVEKAIKEKTCNALLLKVNQIGSVT-------ESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 312 ~~~L~~~~~~~~pI~gde~~--~~~~~~~~~~i~~~a~d~v~ik~~k~GGit-------~a~~i~~~A~~~g~~~~~~~~ 382 (445)
+.+|++ .+ +.|+.|+.- +++...+.++ ..|.|-||-+-+-++. -...++.+|+..|+.++.-+
T Consensus 169 l~~Lr~-~G--~~ialDDFGtG~ssl~~L~~l----~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEG- 240 (294)
T 2r6o_A 169 LDALRA-RG--VRLALDDFGTGYSSLSYLSQL----PFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEG- 240 (294)
T ss_dssp HHHHHH-HT--CEEEEEEETSSCBCHHHHHHS----CCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECC-
T ss_pred HHHHHH-CC--CEEEEECCCCCchhHHHHHhC----CCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEec-
Confidence 344443 35 889888852 1234444433 6899999965433332 24567889999999986554
Q ss_pred CCCChhHHHHHHHhhhcCCccc
Q 013317 383 SGETEDTFIADLSVGLATGQIK 404 (445)
Q Consensus 383 ~~et~~~~~~~la~a~~~~~~~ 404 (445)
.||... .++...+++.++.
T Consensus 241 -VEt~~q--~~~l~~lG~d~~Q 259 (294)
T 2r6o_A 241 -IETAQQ--YAFLRDRGCEFGQ 259 (294)
T ss_dssp -CCSHHH--HHHHHHTTCCEEC
T ss_pred -CCcHHH--HHHHHHcCCCEEE
Confidence 566543 3333444555433
No 170
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=52.09 E-value=34 Score=33.16 Aligned_cols=36 Identities=6% Similarity=0.173 Sum_probs=26.2
Q ss_pred cChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHH
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAEL 315 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L 315 (445)
++.++. +.+.+..++++|.|+=+||+.++.+-+.++
T Consensus 88 l~~e~~-~~L~~~~~~~Gi~~~st~~d~~svd~l~~~ 123 (349)
T 2wqp_A 88 LNEEDE-IKLKEYVESKGMIFISTLFSRAAALRLQRM 123 (349)
T ss_dssp CCHHHH-HHHHHHHHHTTCEEEEEECSHHHHHHHHHH
T ss_pred CCHHHH-HHHHHHHHHhCCeEEEeeCCHHHHHHHHhc
Confidence 444544 445777889999999999987776665554
No 171
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=50.90 E-value=62 Score=31.32 Aligned_cols=45 Identities=7% Similarity=-0.045 Sum_probs=33.4
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
-+++..+++++.. .++||++.-- +.+.+|+.+++..+ +|.|++=-
T Consensus 263 ~a~~~i~~v~~~~-~~ipII~~GG-I~s~~da~~~l~aG-Ad~V~vgr 307 (354)
T 4ef8_A 263 TALANINAFYRRC-PGKLIFGCGG-VYTGEDAFLHVLAG-ASMVQVGT 307 (354)
T ss_dssp HHHHHHHHHHHHC-TTSEEEEESC-CCSHHHHHHHHHHT-EEEEEECH
T ss_pred HHHHHHHHHHHhC-CCCCEEEECC-cCCHHHHHHHHHcC-CCEEEEhH
Confidence 3567778888874 2499866654 56799999999876 79988653
No 172
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=50.54 E-value=69 Score=29.86 Aligned_cols=95 Identities=18% Similarity=0.147 Sum_probs=66.6
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCcccc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGS 359 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GG 359 (445)
..++-++.+.+..+++++.++=+|+++++.+-+.++ .+ -+.|.+-+. +|.. +.+.+. +.--.|.+|-+..|+
T Consensus 70 ~l~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~---~d-~~kIga~~~--~n~~-ll~~~a-~~~kPV~lk~G~~~t 141 (280)
T 2qkf_A 70 GLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV---CD-VIQLPAFLA--RQTD-LVVAMA-KTGNVVNIKKPQFLS 141 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH---CS-EEEECGGGT--TBHH-HHHHHH-HTCCEEEEECCTTSC
T ss_pred chHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh---CC-EEEECcccc--cCHH-HHHHHH-cCCCcEEEECCCCCC
Confidence 335556667777788999999999999988887776 22 134434432 4445 444332 456788999999889
Q ss_pred HHHHHHHHHHHHHcCC-cEEecCC
Q 013317 360 VTESIEAVKMAKRAGW-GVMASHR 382 (445)
Q Consensus 360 it~a~~i~~~A~~~g~-~~~~~~~ 382 (445)
+.+++.+++.++..|- .+++-|+
T Consensus 142 ~~e~~~A~~~i~~~Gn~~i~L~~r 165 (280)
T 2qkf_A 142 PSQMKNIVEKFHEAGNGKLILCER 165 (280)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEC
Confidence 9999999998888874 5555553
No 173
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=49.39 E-value=58 Score=30.54 Aligned_cols=36 Identities=14% Similarity=0.105 Sum_probs=27.1
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHH
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYA 313 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~ 313 (445)
++-.++-++.+.+..+++++.++=+|+++++.+-+.
T Consensus 73 G~g~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~ 108 (285)
T 3sz8_A 73 GVGLDEGLKIFAEVKARFGVPVITDVHEAEQAAPVA 108 (285)
T ss_dssp CSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHH
T ss_pred CcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 334456677778888889999999999987765543
No 174
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=48.91 E-value=86 Score=27.77 Aligned_cols=43 Identities=12% Similarity=0.261 Sum_probs=32.7
Q ss_pred CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 305 DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 305 ~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
...+++.++++++. + +||+++-- +++++++.++++.+ +|.+.+
T Consensus 172 ~~~~~~~i~~~~~~-~--ipvia~GG-I~s~~~~~~~~~~G-ad~v~v 214 (234)
T 1yxy_A 172 AGPDVALIEALCKA-G--IAVIAEGK-IHSPEEAKKINDLG-VAGIVV 214 (234)
T ss_dssp SSCCHHHHHHHHHT-T--CCEEEESC-CCSHHHHHHHHTTC-CSEEEE
T ss_pred CCCCHHHHHHHHhC-C--CCEEEECC-CCCHHHHHHHHHCC-CCEEEE
Confidence 34578888998887 6 88866544 56799999999886 677765
No 175
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=48.65 E-value=47 Score=29.81 Aligned_cols=44 Identities=7% Similarity=0.046 Sum_probs=33.8
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcC--CCCEEEec
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEK--TCNALLLK 353 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~--a~d~v~ik 353 (445)
-|++.++++++.++ +||+++-- +++++++.++++.. .+|.+.+=
T Consensus 177 ~~~~~~~~i~~~~~--ipvia~GG-I~~~~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 177 PNLELLKNVCAATD--RPVVASGG-VSSLDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp CCHHHHHHHHHTCS--SCEEEESC-CCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred CCHHHHHHHHHhcC--CCEEEECC-CCCHHHHHHHHhhccCCCceeeee
Confidence 37899999998887 88866654 57799999998874 56776653
No 176
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=47.89 E-value=2e+02 Score=28.48 Aligned_cols=126 Identities=7% Similarity=0.032 Sum_probs=78.2
Q ss_pred CCcChHHHHHHHHHhhhcCCeeEEECCCCc---cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec
Q 013317 277 QKVSGDGLKNVYRSFISDHPIVSIEDPFDQ---DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 277 ~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~---~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
..++.++-+++. +.|++.++..||=-+|. .|++..+.+.+.. .+..+++- ...+..+++.+++.+ ++.|.+=
T Consensus 56 ~~~s~eeKl~Ia-~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~~-~~~~v~~~--~r~~~~di~~A~~aG-~~~V~i~ 130 (423)
T 3ivs_A 56 AFFDTEKKIQIA-KALDNFGVDYIELTSPVASEQSRQDCEAICKLG-LKCKILTH--IRCHMDDARVAVETG-VDGVDVV 130 (423)
T ss_dssp CCCCHHHHHHHH-HHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSC-CSSEEEEE--EESCHHHHHHHHHTT-CSEEEEE
T ss_pred CCcCHHHHHHHH-HHHHHcCCCEEEEeecccCHHHHHHHHHHHhcC-CCCEEEEe--eccChhhHHHHHHcC-CCEEEEE
Confidence 357889988874 56888999999987653 4455666666532 23555432 234678898888875 4555542
Q ss_pred c-------------CccccHHHHHHHHHHHHHcCCcEEecCCC-CCChhHH---HHHHHhhhcCCccccCC
Q 013317 354 V-------------NQIGSVTESIEAVKMAKRAGWGVMASHRS-GETEDTF---IADLSVGLATGQIKTGA 407 (445)
Q Consensus 354 ~-------------~k~GGit~a~~i~~~A~~~g~~~~~~~~~-~et~~~~---~~~la~a~~~~~~~~G~ 407 (445)
+ ++-.-+..+.+++++|+++|+.+.++... ..+.... ++..+...++..+.+.+
T Consensus 131 ~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~D 201 (423)
T 3ivs_A 131 IGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIAD 201 (423)
T ss_dssp EEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred eeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccCC
Confidence 2 22233567778999999999998765421 1222233 23445556777776544
No 177
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=47.83 E-value=91 Score=29.80 Aligned_cols=131 Identities=11% Similarity=0.055 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHhcCCCcceEEEEecc--ccccccc------------cCcceeecccCCCCCCCCCcChHHHHHHHHHh
Q 013317 226 YEGFELLKTAIAKGGYIGKIVIGMDVA--ASEFYDR------------KDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 291 (445)
Q Consensus 226 ~~~l~~v~~ai~~~G~~~~i~l~vD~~--a~~~~~~------------~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~ 291 (445)
.-++.+||+++.+.|+..++.||-=.+ ++.||.+ ++..|+.+.. +..|+++....-
T Consensus 183 DGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpa----------N~~EAlre~~~D 252 (342)
T 1h7n_A 183 DGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPA----------GRGLARRALERD 252 (342)
T ss_dssp TTHHHHHHHHHHHTTCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTT----------CHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHCCCccCceEeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCC----------CHHHHHHHHHhh
Confidence 457889999999999843666664221 3445531 3457777632 356766654333
Q ss_pred hh-cCCeeEEECCCCccCHHHHHHHHHHh-CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHH
Q 013317 292 IS-DHPIVSIEDPFDQDDWEHYAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKM 369 (445)
Q Consensus 292 ~~-~~~i~~iEdP~~~~D~~~~~~L~~~~-~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~ 369 (445)
++ -.++.++-=-++- ++-.+++++++ . +|+++-..+ ....-++...++++.|- =.-+++...-
T Consensus 253 i~EGAD~vMVKPal~Y--LDIi~~vk~~~p~--~P~aaYqVS-GEYAMikaAa~~GwiD~----------~~~v~Esl~~ 317 (342)
T 1h7n_A 253 MSEGADGIIVKPSTFY--LDIMRDASEICKD--LPICAYHVS-GEYAMLHAAAEKGVVDL----------KTIAFESHQG 317 (342)
T ss_dssp HHTTCSEEEEESSGGG--HHHHHHHHHHTTT--SCEEEEECH-HHHHHHHHHHHTTSSCH----------HHHHHHHHHH
T ss_pred HHhCCCeEEEecCccH--HHHHHHHHHhccC--CCeEEEEcC-cHHHHHHHHHHcCCccH----------HHHHHHHHHH
Confidence 33 3567777755553 56788999999 6 999888753 22344555666666652 1223333444
Q ss_pred HHHcCCcEEecC
Q 013317 370 AKRAGWGVMASH 381 (445)
Q Consensus 370 A~~~g~~~~~~~ 381 (445)
.+.+|-.+++.-
T Consensus 318 ~kRAGAd~IiTY 329 (342)
T 1h7n_A 318 FLRAGARLIITY 329 (342)
T ss_dssp HHHTTCSEEEET
T ss_pred HHhcCCCEEEee
Confidence 455676665543
No 178
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=47.06 E-value=76 Score=30.17 Aligned_cols=108 Identities=12% Similarity=0.080 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHHhcCCCcceEEEEecc--ccccccc------------cCcceeecccCCCCCCCCCcChHHHHHHHHHh
Q 013317 226 YEGFELLKTAIAKGGYIGKIVIGMDVA--ASEFYDR------------KDKTYDLNFKEENNDGSQKVSGDGLKNVYRSF 291 (445)
Q Consensus 226 ~~~l~~v~~ai~~~G~~~~i~l~vD~~--a~~~~~~------------~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~ 291 (445)
.-++.+||+++.+.|+..++.||-=.+ ++.||.+ ++..|+.+.. +..|+++....-
T Consensus 172 DGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpa----------N~~EAlre~~~D 241 (330)
T 1pv8_A 172 DGRVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPG----------ARGLALRAVDRD 241 (330)
T ss_dssp CCHHHHHHHHHHHTTCTTTCEEBCCCEECCCGGGHHHHHCC-------------CCTT----------CHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCcCCceEeehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCC----------CHHHHHHHHHhh
Confidence 347889999999999864477763221 3445531 3457877633 356766654433
Q ss_pred hh-cCCeeEEECCCCccCHHHHHHHHHHh-CCceEEEeccccccCHHHHHHHHhcCCCC
Q 013317 292 IS-DHPIVSIEDPFDQDDWEHYAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 292 ~~-~~~i~~iEdP~~~~D~~~~~~L~~~~-~~~~pI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
++ -.++.++-=-++- ++-.+++++++ . +|+++-..+ ....-++...++++.|
T Consensus 242 i~EGAD~vMVKPal~Y--LDIi~~vk~~~p~--~P~aaYqVS-GEYAMikaAa~~GwiD 295 (330)
T 1pv8_A 242 VREGADMLMVKPGMPY--LDIVREVKDKHPD--LPLAVYHVS-GEFAMLWHGAQAGAFD 295 (330)
T ss_dssp HHTTCSBEEEESCGGG--HHHHHHHHHHSTT--SCEEEEECH-HHHHHHHHHHHTTSSC
T ss_pred HHhCCceEEEecCccH--HHHHHHHHHhcCC--CCeEEEEcC-cHHHHHHHHHHcCCcc
Confidence 34 3567777755553 56788999998 6 999888753 2234455566666665
No 179
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=46.71 E-value=1.5e+02 Score=29.94 Aligned_cols=111 Identities=7% Similarity=0.121 Sum_probs=64.8
Q ss_pred HHhhhcCCeeEEE----CCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc---Cc-----
Q 013317 289 RSFISDHPIVSIE----DPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV---NQ----- 356 (445)
Q Consensus 289 ~~~~~~~~i~~iE----dP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~---~k----- 356 (445)
..+++ .++..|+ .+......+..++++++.+ .+||++.. +.+.+.++.+++.+ +|++.+-. +.
T Consensus 235 ~~l~~-aG~d~I~id~a~g~~~~~~~~v~~i~~~~p-~~~Vi~g~--v~t~e~a~~l~~aG-aD~I~vg~g~Gs~~~t~~ 309 (490)
T 4avf_A 235 AALVA-AGVDVVVVDTAHGHSKGVIERVRWVKQTFP-DVQVIGGN--IATAEAAKALAEAG-ADAVKVGIGPGSICTTRI 309 (490)
T ss_dssp HHHHH-TTCSEEEEECSCCSBHHHHHHHHHHHHHCT-TSEEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCSTTCHHHH
T ss_pred HHHhh-cccceEEecccCCcchhHHHHHHHHHHHCC-CceEEEee--eCcHHHHHHHHHcC-CCEEEECCCCCcCCCccc
Confidence 33333 3555554 3444444577889998873 28886653 35688888888765 68887621 11
Q ss_pred -----cccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCccccCC
Q 013317 357 -----IGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 357 -----~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
...++...++++.++..+++++.... .-+......-| +.++..+..|.
T Consensus 310 ~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GG-I~~~~di~kal--~~GAd~V~vGs 362 (490)
T 4avf_A 310 VAGVGVPQISAIANVAAALEGTGVPLIADGG-IRFSGDLAKAM--VAGAYCVMMGS 362 (490)
T ss_dssp HTCBCCCHHHHHHHHHHHHTTTTCCEEEESC-CCSHHHHHHHH--HHTCSEEEECT
T ss_pred cCCCCccHHHHHHHHHHHhccCCCcEEEeCC-CCCHHHHHHHH--HcCCCeeeecH
Confidence 12345556677777677999876553 23332222223 34566666665
No 180
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=46.08 E-value=1.2e+02 Score=28.33 Aligned_cols=146 Identities=12% Similarity=0.145 Sum_probs=84.5
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC---ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhc---CCCCEEE
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD---QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKE---KTCNALL 351 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~---~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~---~a~d~v~ 351 (445)
.++.++-++++ +.|.+.++..||=-++ ++|++..+++++..+ ++.+++= ......++...++. -..+.|.
T Consensus 23 ~~~~~~K~~i~-~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~-~~~i~~l--~~~~~~di~~a~~~~~~ag~~~v~ 98 (293)
T 3ewb_X 23 NFDVKEKIQIA-LQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIK-HCSVTGL--ARCVEGDIDRAEEALKDAVSPQIH 98 (293)
T ss_dssp CCCHHHHHHHH-HHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCC-SSEEEEE--EESSHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCHHHHHHHH-HHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcC-CCEEEEE--ecCCHHHHHHHHHHHhhcCCCEEE
Confidence 57888988875 5578899999997664 346677777776653 3555322 11246777777663 2345554
Q ss_pred ecc-------------CccccHHHHHHHHHHHHHcCCcEEecCCC-CCChhHH---HHHHHhhhcCCccccCCCCCchhH
Q 013317 352 LKV-------------NQIGSVTESIEAVKMAKRAGWGVMASHRS-GETEDTF---IADLSVGLATGQIKTGAPCRSERL 414 (445)
Q Consensus 352 ik~-------------~k~GGit~a~~i~~~A~~~g~~~~~~~~~-~et~~~~---~~~la~a~~~~~~~~G~~~~~er~ 414 (445)
+=. +.--.+..+.+++++|+++|..+.++... +.+.... .+..+...++..+.+.+-.+.-.=
T Consensus 99 i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P 178 (293)
T 3ewb_X 99 IFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVGYTNP 178 (293)
T ss_dssp EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCH
T ss_pred EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCH
Confidence 321 11223445678888999999998765531 2233333 344455667877776664433322
Q ss_pred HHHHHHHH-HHHHh
Q 013317 415 AKYNQLLR-IEEEL 427 (445)
Q Consensus 415 ~k~n~ll~-i~~~l 427 (445)
..+-++++ +-+.+
T Consensus 179 ~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 179 TEFGQLFQDLRREI 192 (293)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 33334443 33444
No 181
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=45.02 E-value=60 Score=29.21 Aligned_cols=111 Identities=11% Similarity=0.072 Sum_probs=67.7
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEec---c-----cccc-CHHHHHHHHhcCCCCEE
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGD---D-----LLVT-NPKRVEKAIKEKTCNAL 350 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gd---e-----~~~~-~~~~~~~~i~~~a~d~v 350 (445)
++..+.++ .+..++.+...|+ ....+..+++++.++ +||+|. + .+++ +.+++..+.+. .+|+|
T Consensus 34 ~~~~~~~~-A~a~~~~Ga~~i~----~~~~~~i~~ir~~v~--~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~a-Gad~I 105 (229)
T 3q58_A 34 KPEIVAAM-AQAAASAGAVAVR----IEGIENLRTVRPHLS--VPIIGIIKRDLTGSPVRITPYLQDVDALAQA-GADII 105 (229)
T ss_dssp SHHHHHHH-HHHHHHTTCSEEE----EESHHHHHHHGGGCC--SCEEEECBCCCSSCCCCBSCSHHHHHHHHHH-TCSEE
T ss_pred CcchHHHH-HHHHHHCCCcEEE----ECCHHHHHHHHHhcC--CCEEEEEeecCCCCceEeCccHHHHHHHHHc-CCCEE
Confidence 44555554 4556777766666 246788999999998 998642 1 2333 34567666654 46788
Q ss_pred EeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcc
Q 013317 351 LLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQI 403 (445)
Q Consensus 351 ~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~ 403 (445)
.++......-....++++.+++.|+.+++.....| -+.-+...++.++
T Consensus 106 ~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~e-----ea~~a~~~Gad~I 153 (229)
T 3q58_A 106 AFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTVN-----EGISCHQKGIEFI 153 (229)
T ss_dssp EEECCSSCCSSCHHHHHHHHHHTTCEEEEECSSHH-----HHHHHHHTTCSEE
T ss_pred EECccccCChHHHHHHHHHHHHCCCEEEEecCCHH-----HHHHHHhCCCCEE
Confidence 88876422224556677777888888876653211 1233344566666
No 182
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=44.92 E-value=76 Score=30.54 Aligned_cols=57 Identities=9% Similarity=0.029 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC-ccccHHHHHHHH
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN-QIGSVTESIEAV 367 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~-k~GGit~a~~i~ 367 (445)
++..+++++.++.++||+|.-- +.+.+|+.+++..+ +|.|++=-. -..|..-..++.
T Consensus 262 ~~~v~~i~~~~~~~ipIIg~GG-I~s~~da~~~l~aG-Ad~V~igra~~~~gP~~~~~i~ 319 (345)
T 3oix_A 262 LANVHAFYKRLNPSIQIIGTGG-VXTGRDAFEHILCG-ASMVQIGTALHQEGPQIFKRIT 319 (345)
T ss_dssp HHHHHHHHTTSCTTSEEEEESS-CCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEEECC-CCChHHHHHHHHhC-CCEEEEChHHHhcChHHHHHHH
Confidence 5667788888744589866655 56799999999877 799987654 334444333333
No 183
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=44.70 E-value=88 Score=29.35 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=62.6
Q ss_pred hHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccH
Q 013317 281 GDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSV 360 (445)
Q Consensus 281 ~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGi 360 (445)
..+-++.+.+.++++++.++=+|+++++.+-+.++ .+ -.. +|--. +++..=++.+ . +.--.|.+|-+..+++
T Consensus 74 l~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~~---vd-~~k-IgA~~-~~n~~Ll~~~-a-~~~kPV~lk~G~~~t~ 145 (292)
T 1o60_A 74 MEEGLKIFQELKDTFGVKIITDVHEIYQCQPVADV---VD-IIQ-LPAFL-ARQTDLVEAM-A-KTGAVINVKKPQFLSP 145 (292)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHTT---CS-EEE-ECGGG-TTCHHHHHHH-H-HTTCEEEEECCTTSCG
T ss_pred HHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhc---CC-EEE-ECccc-ccCHHHHHHH-H-cCCCcEEEeCCCCCCH
Confidence 34556666777788999999999998887666542 22 123 34433 3455533333 3 4567888888888888
Q ss_pred HHHHHHHHHHHHcCC-cEEecCC
Q 013317 361 TESIEAVKMAKRAGW-GVMASHR 382 (445)
Q Consensus 361 t~a~~i~~~A~~~g~-~~~~~~~ 382 (445)
.+++.++++++..|- .+++-|+
T Consensus 146 ~ei~~Av~~i~~~Gn~~i~L~~r 168 (292)
T 1o60_A 146 SQMGNIVEKIEECGNDKIILCDR 168 (292)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEC
Confidence 888888888888774 5555553
No 184
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=44.16 E-value=81 Score=30.41 Aligned_cols=37 Identities=11% Similarity=0.096 Sum_probs=26.2
Q ss_pred HHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 312 YAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 312 ~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
-+++++... .||+..-. .+++...++++.+.+|+|-+
T Consensus 278 a~~ik~~~~--~~v~~~g~--~~~~~ae~~l~~G~aD~V~~ 314 (358)
T 4a3u_A 278 SPEIRKVFK--PPLVLNQD--YTFETAQAALDSGVADAISF 314 (358)
T ss_dssp HHHHHHHCC--SCEEEESS--CCHHHHHHHHHHTSCSEEEE
T ss_pred HHHHHHhcC--CcEEEeCC--CCHHHHHHHHHcCCceEeHh
Confidence 345666665 56544333 36999999999999999874
No 185
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=44.12 E-value=54 Score=30.97 Aligned_cols=88 Identities=13% Similarity=0.117 Sum_probs=47.7
Q ss_pred cChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G 358 (445)
+-.++-++.+.+..+++++.++=+|+++++.+-+.++ .+ -+.| |--. ++|..=++.+. +.---|++|-+...
T Consensus 95 lg~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~---vd-~lkI-gA~~-~~n~~LLr~va--~~gkPVilK~Gms~ 166 (298)
T 3fs2_A 95 IGLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV---VD-VLQI-PAFL-CRQTDLLIAAA--RTGRVVNVKKGQFL 166 (298)
T ss_dssp CCHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT---CS-EEEE-CGGG-TTCHHHHHHHH--HTTSEEEEECCTTC
T ss_pred cCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh---CC-EEEE-Cccc-cCCHHHHHHHH--ccCCcEEEeCCCCC
Confidence 3345667777888888999999999987665544332 22 1222 2222 23333333322 22335555555555
Q ss_pred cHHHHHHHHHHHHHcC
Q 013317 359 SVTESIEAVKMAKRAG 374 (445)
Q Consensus 359 Git~a~~i~~~A~~~g 374 (445)
++.++..+++++.+.|
T Consensus 167 t~~ei~~ave~i~~~G 182 (298)
T 3fs2_A 167 APWDMKNVLAKITESG 182 (298)
T ss_dssp CGGGHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHcC
Confidence 5556655555555544
No 186
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=43.55 E-value=73 Score=31.00 Aligned_cols=128 Identities=13% Similarity=0.114 Sum_probs=78.9
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC---ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhc---CCCCEEE
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD---QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKE---KTCNALL 351 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~---~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~---~a~d~v~ 351 (445)
.++.++-+++ .+.|++.++..||=-++ +.|++..+++++... ++.|++= ...+..++.+.++. -.++.|.
T Consensus 30 ~~~~~~Kl~i-a~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~-~~~i~~l--~r~~~~di~~a~~al~~ag~~~v~ 105 (370)
T 3rmj_A 30 AMTKEEKIRV-ARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTIT-KSTVCSL--SRAIERDIRQAGEAVAPAPKKRIH 105 (370)
T ss_dssp CCCHHHHHHH-HHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCS-SSEEEEE--EESSHHHHHHHHHHHTTSSSEEEE
T ss_pred CcCHHHHHHH-HHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCC-CCeEEEE--ecCCHHHHHHHHHHHhhCCCCEEE
Confidence 4788999987 45678899999987443 457777777776543 3555322 12357888877662 2345554
Q ss_pred eccC-------------ccccHHHHHHHHHHHHHcCCcEEecCCC-CCChhHHH---HHHHhhhcCCccccCCCC
Q 013317 352 LKVN-------------QIGSVTESIEAVKMAKRAGWGVMASHRS-GETEDTFI---ADLSVGLATGQIKTGAPC 409 (445)
Q Consensus 352 ik~~-------------k~GGit~a~~i~~~A~~~g~~~~~~~~~-~et~~~~~---~~la~a~~~~~~~~G~~~ 409 (445)
+=.+ .-.-+..+.+++++|+++|..+.+++.. +.+..... +..+...++..+.+.+-.
T Consensus 106 if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~ 180 (370)
T 3rmj_A 106 TFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTV 180 (370)
T ss_dssp EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEecCcc
Confidence 3221 1223445566788999999998777732 23333433 444556688888766643
No 187
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=43.15 E-value=1.4e+02 Score=28.40 Aligned_cols=107 Identities=14% Similarity=0.113 Sum_probs=68.2
Q ss_pred hHHHHHHHHHHHhcCCCcceEEEEecc--ccccccc------------cCcceeecccCCCCCCCCCcChHHHHHHHH-H
Q 013317 226 YEGFELLKTAIAKGGYIGKIVIGMDVA--ASEFYDR------------KDKTYDLNFKEENNDGSQKVSGDGLKNVYR-S 290 (445)
Q Consensus 226 ~~~l~~v~~ai~~~G~~~~i~l~vD~~--a~~~~~~------------~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~-~ 290 (445)
.-++.+||+++.+.|+. ++.||-=.+ +|.||.+ ++..|+.+.. +..|+++... +
T Consensus 174 DGrV~aIR~aLd~~G~~-~v~ImsYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpa----------N~~EAlrE~~~D 242 (328)
T 1w1z_A 174 DGRIGAIREALDETDHS-DVGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPA----------NTEEAMKEVELD 242 (328)
T ss_dssp TTHHHHHHHHHHHTTCT-TSEEEEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTT----------CSHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCC-CceeeehhHHHhhhccchHHHHhccCCCCCCccccCCCCC----------CHHHHHHHHHhh
Confidence 45788999999999984 677764222 3445531 3457877633 2356665543 3
Q ss_pred hhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCC
Q 013317 291 FISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 291 ~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
+-|-.++.++-=-++- ++-.+++++++. +|+++-..+ .-..-++...++++.|
T Consensus 243 i~EGAD~vMVKPal~Y--LDIir~vk~~~~--~P~aaYqVS-GEYAMikaAa~~GwiD 295 (328)
T 1w1z_A 243 IVEGADIVMVKPGLAY--LDIVWRTKERFD--VPVAIYHVS-GEYAMVKAAAAKGWID 295 (328)
T ss_dssp HHHTCSEEEEESCGGG--HHHHHHHHHHHC--SCEEEEECH-HHHHHHHHHHHTTSSC
T ss_pred HHhCCCEEEEcCCCch--HHHHHHHHHhcC--CCEEEEEcc-HHHHHHHHHHHcCCcc
Confidence 3334668888755653 567899999998 999887653 2234455566677766
No 188
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=42.69 E-value=2e+02 Score=26.58 Aligned_cols=117 Identities=14% Similarity=0.083 Sum_probs=67.0
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccC-------------------------HHHHHHHHHH-hCCceEE--Eeccc-
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-------------------------WEHYAELTGK-IGRHVQI--VGDDL- 330 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D-------------------------~~~~~~L~~~-~~~~~pI--~gde~- 330 (445)
+.+..++.+.. +++.+..+||=-+|..| ++..+++|++ .. +|| ++.-.
T Consensus 32 ~~~~~~~~~~~-l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~--~Pivlm~Y~n~ 108 (271)
T 3nav_A 32 NPEQSLAIMQT-LIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPE--TPIGLLMYANL 108 (271)
T ss_dssp CHHHHHHHHHH-HHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--SCEEEEECHHH
T ss_pred CHHHHHHHHHH-HHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--CCEEEEecCcH
Confidence 45667776554 56667777773333211 3455667766 55 776 44321
Q ss_pred -cccCHHHHHH-HHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcccc
Q 013317 331 -LVTNPKRVEK-AIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 331 -~~~~~~~~~~-~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+....++|.+ +.+.+.--++.+|+.- .+..+..+.|+++|+..+.-. ...|....+..++-. ...|+..
T Consensus 109 v~~~g~~~f~~~~~~aGvdGvIipDlp~----ee~~~~~~~~~~~gl~~I~lv-ap~t~~eri~~i~~~-~~gfiY~ 179 (271)
T 3nav_A 109 VYARGIDDFYQRCQKAGVDSVLIADVPT----NESQPFVAAAEKFGIQPIFIA-PPTASDETLRAVAQL-GKGYTYL 179 (271)
T ss_dssp HHHTCHHHHHHHHHHHTCCEEEETTSCG----GGCHHHHHHHHHTTCEEEEEE-CTTCCHHHHHHHHHH-CCSCEEE
T ss_pred HHHHhHHHHHHHHHHCCCCEEEECCCCH----HHHHHHHHHHHHcCCeEEEEE-CCCCCHHHHHHHHHH-CCCeEEE
Confidence 1223455544 4555554457788764 578889999999999854222 234444454444433 5577765
No 189
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=41.91 E-value=1.5e+02 Score=29.20 Aligned_cols=91 Identities=10% Similarity=0.244 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc-------Cc------cccHHHHHHHHHHHHHcCC
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV-------NQ------IGSVTESIEAVKMAKRAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~-------~k------~GGit~a~~i~~~A~~~g~ 375 (445)
.+..+++++..+ +||+... +.+++.++.+++.+ +|+|.+-. .+ ...++...++++.++..++
T Consensus 173 ~e~I~~ik~~~~--i~Vi~g~--V~t~e~A~~a~~aG-AD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~I 247 (400)
T 3ffs_A 173 IRTLKEIKSKMN--IDVIVGN--VVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGI 247 (400)
T ss_dssp HHHHHHHHTTCC--CEEEEEE--ECSHHHHHHHHHTT-CSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHhcCC--CeEEEee--cCCHHHHHHHHHcC-CCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCC
Confidence 566778887776 8887543 35688888887764 78887721 11 1234455666666666789
Q ss_pred cEEecCCCCCChhHHHHHHHhhhcCCccccCC
Q 013317 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
+++..... -+...... ++++++..+..|.
T Consensus 248 PVIA~GGI-~~~~di~k--alalGAd~V~vGt 276 (400)
T 3ffs_A 248 PIIADGGI-RYSGDIGK--ALAVGASSVMIGS 276 (400)
T ss_dssp CEEEESCC-CSHHHHHH--HHTTTCSEEEECG
T ss_pred CEEecCCC-CCHHHHHH--HHHcCCCEEEECh
Confidence 98655432 23222222 3344566666554
No 190
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=41.66 E-value=1.8e+02 Score=26.05 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=32.5
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
-|++.++++++. + +|++++-- +++++++.++++.+ +|.+.+
T Consensus 169 ~~~~~i~~l~~~-~--ipvIA~GG-I~t~~d~~~~~~~G-adgV~V 209 (232)
T 3igs_A 169 PDLPLVKALHDA-G--CRVIAEGR-YNSPALAAEAIRYG-AWAVTV 209 (232)
T ss_dssp CCHHHHHHHHHT-T--CCEEEESC-CCSHHHHHHHHHTT-CSEEEE
T ss_pred CCHHHHHHHHhc-C--CcEEEECC-CCCHHHHHHHHHcC-CCEEEE
Confidence 478899999887 6 99866644 56799999999885 777776
No 191
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=41.29 E-value=1.6e+02 Score=26.26 Aligned_cols=41 Identities=17% Similarity=0.299 Sum_probs=32.4
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
-|++.++++++. + +|++++-- +++++++.++++.+ +|.+.+
T Consensus 169 ~~~~li~~l~~~-~--ipvIA~GG-I~t~~d~~~~~~~G-adgV~V 209 (229)
T 3q58_A 169 PDLAMVTQLSHA-G--CRVIAEGR-YNTPALAANAIEHG-AWAVTV 209 (229)
T ss_dssp CCHHHHHHHHTT-T--CCEEEESS-CCSHHHHHHHHHTT-CSEEEE
T ss_pred CCHHHHHHHHHc-C--CCEEEECC-CCCHHHHHHHHHcC-CCEEEE
Confidence 478888999876 5 99866654 56799999999885 777776
No 192
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=41.27 E-value=1.5e+02 Score=26.45 Aligned_cols=109 Identities=9% Similarity=0.154 Sum_probs=70.3
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccC-HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D-~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G 358 (445)
+.+++++.... +-+.++.+||=.+...+ .+.+++|+++.+ .+-+-.+-. . +.++++.+++.+ +|++.. |
T Consensus 27 ~~~~~~~~~~a-l~~gGv~~iel~~k~~~~~~~i~~l~~~~~-~l~vgaGtv-l-~~d~~~~A~~aG-Ad~v~~-----p 96 (224)
T 1vhc_A 27 NADDILPLADT-LAKNGLSVAEITFRSEAAADAIRLLRANRP-DFLIAAGTV-L-TAEQVVLAKSSG-ADFVVT-----P 96 (224)
T ss_dssp SGGGHHHHHHH-HHHTTCCEEEEETTSTTHHHHHHHHHHHCT-TCEEEEESC-C-SHHHHHHHHHHT-CSEEEC-----S
T ss_pred CHHHHHHHHHH-HHHcCCCEEEEeccCchHHHHHHHHHHhCc-CcEEeeCcE-e-eHHHHHHHHHCC-CCEEEE-----C
Confidence 45667776544 45678999998876433 566777888885 355544543 3 568888888877 577732 2
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcccc
Q 013317 359 SVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+ .-..+++.|+++|.++++|..+ .++ +.-|...++.++++
T Consensus 97 ~--~d~~v~~~ar~~g~~~i~Gv~t-~~e----~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 97 G--LNPKIVKLCQDLNFPITPGVNN-PMA----IEIALEMGISAVKF 136 (224)
T ss_dssp S--CCHHHHHHHHHTTCCEECEECS-HHH----HHHHHHTTCCEEEE
T ss_pred C--CCHHHHHHHHHhCCCEEeccCC-HHH----HHHHHHCCCCEEEE
Confidence 2 1255677888899998877531 111 23345567888876
No 193
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=40.97 E-value=1.1e+02 Score=26.29 Aligned_cols=76 Identities=16% Similarity=0.072 Sum_probs=45.4
Q ss_pred CCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHc-
Q 013317 295 HPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRA- 373 (445)
Q Consensus 295 ~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~- 373 (445)
.+..++-.|... ..+.+..++.+ +|++.+ +.++.++.+.++.+ +|++.+.....+|+..+.++ .+..
T Consensus 82 ~Gad~iv~~~~~---~~~~~~~~~~g--~~vi~g---~~t~~e~~~a~~~G-ad~vk~~~~~~~g~~~~~~l---~~~~~ 149 (205)
T 1wa3_A 82 SGAEFIVSPHLD---EEISQFCKEKG--VFYMPG---VMTPTELVKAMKLG-HTILKLFPGEVVGPQFVKAM---KGPFP 149 (205)
T ss_dssp HTCSEEECSSCC---HHHHHHHHHHT--CEEECE---ECSHHHHHHHHHTT-CCEEEETTHHHHHHHHHHHH---HTTCT
T ss_pred cCCCEEEcCCCC---HHHHHHHHHcC--CcEECC---cCCHHHHHHHHHcC-CCEEEEcCccccCHHHHHHH---HHhCC
Confidence 345555455543 33445556677 888774 23588888887665 68887766544555444333 3444
Q ss_pred CCcEEecCC
Q 013317 374 GWGVMASHR 382 (445)
Q Consensus 374 g~~~~~~~~ 382 (445)
+++++....
T Consensus 150 ~~pvia~GG 158 (205)
T 1wa3_A 150 NVKFVPTGG 158 (205)
T ss_dssp TCEEEEBSS
T ss_pred CCcEEEcCC
Confidence 688766553
No 194
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=40.54 E-value=82 Score=28.91 Aligned_cols=92 Identities=14% Similarity=0.016 Sum_probs=53.5
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccC-------------------------HHHHHHHHHH-hCCceEEEe--cc--
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-------------------------WEHYAELTGK-IGRHVQIVG--DD-- 329 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D-------------------------~~~~~~L~~~-~~~~~pI~g--de-- 329 (445)
+.++..+.+. .+++.+..+||==+|..| ++..+++++. ++ +||.+ ..
T Consensus 29 ~~~~~~~~~~-~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~--~Pv~lm~y~n~ 105 (268)
T 1qop_A 29 GIEQSLKIID-TLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPT--IPIGLLMYANL 105 (268)
T ss_dssp CHHHHHHHHH-HHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSS--SCEEEEECHHH
T ss_pred CHHHHHHHHH-HHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--CCEEEEEcccH
Confidence 4456666644 467777777764332222 1446778877 66 77633 22
Q ss_pred ccccCH-HHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEE
Q 013317 330 LLVTNP-KRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVM 378 (445)
Q Consensus 330 ~~~~~~-~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~ 378 (445)
.+.+.. ..++.+.+.++--++.+++.- .+..+..+.++++|+..+
T Consensus 106 v~~~g~~~~~~~~~~aGadgii~~d~~~----e~~~~~~~~~~~~g~~~i 151 (268)
T 1qop_A 106 VFNNGIDAFYARCEQVGVDSVLVADVPV----EESAPFRQAALRHNIAPI 151 (268)
T ss_dssp HHTTCHHHHHHHHHHHTCCEEEETTCCG----GGCHHHHHHHHHTTCEEE
T ss_pred HHHhhHHHHHHHHHHcCCCEEEEcCCCH----HHHHHHHHHHHHcCCcEE
Confidence 111122 334455556654466666652 567788889999998753
No 195
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=40.50 E-value=1.1e+02 Score=29.00 Aligned_cols=107 Identities=13% Similarity=0.078 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHhcCCCcceEEEEecc--ccccccc-----------cCcceeecccCCCCCCCCCcChHHHHHHHHHhh
Q 013317 226 YEGFELLKTAIAKGGYIGKIVIGMDVA--ASEFYDR-----------KDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFI 292 (445)
Q Consensus 226 ~~~l~~v~~ai~~~G~~~~i~l~vD~~--a~~~~~~-----------~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~ 292 (445)
.-++.+||+++.+.|+. ++.||-=.+ +|.||.+ ++..|+.+.. +..|+++....-+
T Consensus 168 DGrV~aIR~aLd~~G~~-~v~ImsYsaKyASafYGPFRdAa~Sap~GDRktYQmdpa----------N~~EAlre~~~Di 236 (323)
T 1l6s_A 168 DGQVQAIRQALDAAGFK-DTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPM----------NRREAIRESLLDE 236 (323)
T ss_dssp TTHHHHHHHHHHHTTCT-TCEEBCCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTT----------CHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCC-CceeeehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCC----------CHHHHHHHHHhhH
Confidence 45788999999999984 677763211 3445532 2456777632 3566666544333
Q ss_pred h-cCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCC
Q 013317 293 S-DHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 293 ~-~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
+ -.++.++-=-++- ++-.+++++++. +|+++-..+ ....-++...++++.|
T Consensus 237 ~EGAD~vMVKPal~Y--LDIi~~vk~~~~--~P~aaYqVS-GEYAMikaAa~~GwiD 288 (323)
T 1l6s_A 237 AQGADCLMVKPAGAY--LDIVRELRERTE--LPIGAYQVS-GEYAMIKFAALAGAID 288 (323)
T ss_dssp HTTCSBEEEESCTTC--HHHHHHHHTTCS--SCEEEEECH-HHHHHHHHHHHTTSSC
T ss_pred HhCCceEEEecCcch--hHHHHHHHHhcC--CCeEEEEcC-cHHHHHHHHHHcCCcc
Confidence 3 3668878755663 567889999987 999888753 2234455566666666
No 196
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=40.22 E-value=1.9e+02 Score=27.84 Aligned_cols=91 Identities=10% Similarity=0.239 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc-------Cc------cccHHHHHHHHHHHHHcCC
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV-------NQ------IGSVTESIEAVKMAKRAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~-------~k------~GGit~a~~i~~~A~~~g~ 375 (445)
.+..+++++..+ +||+... +.+++.++.+++.+ +|+|.+-. .+ ...++...++++.++..++
T Consensus 134 ~~~i~~i~~~~~--~~Vivg~--v~t~e~A~~l~~aG-aD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~i 208 (361)
T 3khj_A 134 IRTLKEIKSKMN--IDVIVGN--VVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGI 208 (361)
T ss_dssp HHHHHHHHHHCC--CEEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcC--CcEEEcc--CCCHHHHHHHHHcC-cCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCC
Confidence 356677788776 8987543 35688888887765 68887621 11 1235555666667777899
Q ss_pred cEEecCCCCCChhHHHHHHHhhhcCCccccCC
Q 013317 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
+++..... .+......- +++++..+..|.
T Consensus 209 PVIA~GGI-~~~~di~ka--la~GAd~V~vGs 237 (361)
T 3khj_A 209 PIIADGGI-RYSGDIGKA--LAVGASSVMIGS 237 (361)
T ss_dssp CEEEESCC-CSHHHHHHH--HHHTCSEEEEST
T ss_pred eEEEECCC-CCHHHHHHH--HHcCCCEEEECh
Confidence 98765532 233222222 334566666554
No 197
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=40.00 E-value=1.2e+02 Score=27.92 Aligned_cols=96 Identities=19% Similarity=0.072 Sum_probs=66.7
Q ss_pred cChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G 358 (445)
+..++-++.+.+..+++++-++=+|+++++.+-.+++ .+ -+.| |--. ++|.+ +.+.+. +.--.|++|-+..|
T Consensus 58 ~g~~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~~---vd-~~~I-gA~~-~rn~~-ll~~~a-~~~~PV~lK~G~~~ 129 (267)
T 2nwr_A 58 HGLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEV---AD-IIQI-PAFL-CRQTD-LLLAAA-KTGRAVNVKKGQFL 129 (267)
T ss_dssp SCHHHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHTT---CS-EEEE-CGGG-TTCHH-HHHHHH-TTTSEEEEECCTTC
T ss_pred ccHHHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHhc---CC-EEEE-Cccc-ccCHH-HHHHHH-cCCCcEEEeCCCCC
Confidence 3445666777777788999999999998887666552 22 1333 4433 35555 444443 56778999999989
Q ss_pred cHHHHHHHHHHHHHcCC-cEEecCC
Q 013317 359 SVTESIEAVKMAKRAGW-GVMASHR 382 (445)
Q Consensus 359 Git~a~~i~~~A~~~g~-~~~~~~~ 382 (445)
++.+++.+++.++..|- .+++-|+
T Consensus 130 t~~e~~~Av~~i~~~GN~~i~L~~r 154 (267)
T 2nwr_A 130 APWDTKNVVEKLKFGGAKEIYLTER 154 (267)
T ss_dssp CGGGGHHHHHHHHHTTCSSEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 99999999999888874 5655554
No 198
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=39.99 E-value=1.1e+02 Score=28.12 Aligned_cols=89 Identities=18% Similarity=0.130 Sum_probs=48.5
Q ss_pred HHHHHHHHHhCCceEEEe--c--cccccCHHHHH-HHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCC
Q 013317 310 EHYAELTGKIGRHVQIVG--D--DLLVTNPKRVE-KAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSG 384 (445)
Q Consensus 310 ~~~~~L~~~~~~~~pI~g--d--e~~~~~~~~~~-~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~ 384 (445)
+..+++++..+ +||++ . ..+.+....+- .+.+.++--++.+|+.- .+..+..+.++++|+..+.=. ..
T Consensus 81 ~~v~~ir~~~~--~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~----ee~~~~~~~~~~~gl~~i~li-ap 153 (271)
T 1ujp_A 81 ELVREVRALTE--KPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPP----DEDPGLVRLAQEIGLETVFLL-AP 153 (271)
T ss_dssp HHHHHHHHHCC--SCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCG----GGCHHHHHHHHHHTCEEECEE-CT
T ss_pred HHHHHHHhcCC--CCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCH----HHHHHHHHHHHHcCCceEEEe-CC
Confidence 55778887766 88766 2 12211233333 34555543377788774 566777788899998643211 22
Q ss_pred CChhHHHHHHHhhhcCCccccC
Q 013317 385 ETEDTFIADLSVGLATGQIKTG 406 (445)
Q Consensus 385 et~~~~~~~la~a~~~~~~~~G 406 (445)
.+....+..++.. ...|+...
T Consensus 154 ~s~~eri~~ia~~-~~gfiy~v 174 (271)
T 1ujp_A 154 TSTDARIATVVRH-ATGFVYAV 174 (271)
T ss_dssp TCCHHHHHHHHTT-CCSCEEEE
T ss_pred CCCHHHHHHHHHh-CCCCEEEE
Confidence 2333333443333 44666554
No 199
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=39.96 E-value=1.6e+02 Score=25.74 Aligned_cols=93 Identities=10% Similarity=-0.005 Sum_probs=57.2
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCc---cCHHHHHHHHHHh-CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQ---DDWEHYAELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~---~D~~~~~~L~~~~-~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
+.+++++.+.+ ++. ++.|+|--++. .-++..++|++.. + .||..|=-....+..+.+.+..-.+|++.+...
T Consensus 17 ~~~~~~~~~~~-~~~-~vd~ie~g~~~~~~~G~~~i~~lr~~~~~--~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~ 92 (218)
T 3jr2_A 17 NLTDAVAVASN-VAS-YVDVIEVGTILAFAEGMKAVSTLRHNHPN--HILVCDMKTTDGGAILSRMAFEAGADWITVSAA 92 (218)
T ss_dssp SHHHHHHHHHH-HGG-GCSEEEECHHHHHHHTTHHHHHHHHHCTT--SEEEEEEEECSCHHHHHHHHHHHTCSEEEEETT
T ss_pred CHHHHHHHHHH-hcC-CceEEEeCcHHHHhcCHHHHHHHHHhCCC--CcEEEEEeecccHHHHHHHHHhcCCCEEEEecC
Confidence 46677777655 443 57889876542 3456678888874 4 677665322233444444333445788888755
Q ss_pred ccccHHHHHHHHHHHHHcCCcEE
Q 013317 356 QIGSVTESIEAVKMAKRAGWGVM 378 (445)
Q Consensus 356 k~GGit~a~~i~~~A~~~g~~~~ 378 (445)
- +-....+..+.++++|+.++
T Consensus 93 ~--~~~~~~~~~~~~~~~g~~~~ 113 (218)
T 3jr2_A 93 A--HIATIAACKKVADELNGEIQ 113 (218)
T ss_dssp S--CHHHHHHHHHHHHHHTCEEE
T ss_pred C--CHHHHHHHHHHHHHhCCccc
Confidence 3 22335677788889999875
No 200
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=39.77 E-value=1.2e+02 Score=27.12 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=31.2
Q ss_pred CCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 304 FDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 304 ~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
+++..++.+++|++.++ +||+.+=- +++++++.++++.+ +|.+.+
T Consensus 175 ~~~~~~~~i~~l~~~~~--~pi~~~GG-I~~~e~i~~~~~~G-ad~viv 219 (248)
T 1geq_A 175 IPKTAYDLLRRAKRICR--NKVAVGFG-VSKREHVVSLLKEG-ANGVVV 219 (248)
T ss_dssp CCHHHHHHHHHHHHHCS--SCEEEESC-CCSHHHHHHHHHTT-CSEEEE
T ss_pred CChhHHHHHHHHHhhcC--CCEEEEee-cCCHHHHHHHHHcC-CCEEEE
Confidence 33445678888988876 88744433 56679999988776 566653
No 201
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=39.76 E-value=43 Score=31.15 Aligned_cols=114 Identities=13% Similarity=0.205 Sum_probs=66.6
Q ss_pred cChHHHHHHHHHhhhcCCeeEEE----CCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIE----DPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iE----dP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
.++.++.+. .++.+..+|. +++-...++.++++++.++ +||.-.+.. -++.++..+.+.+ +|+|.+=.
T Consensus 72 ~~p~~~A~~----y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~--lPvl~kdfi-id~~qv~~A~~~G-AD~VlLi~ 143 (272)
T 3qja_A 72 ADPAKLAQA----YQDGGARIVSVVTEQRRFQGSLDDLDAVRASVS--IPVLRKDFV-VQPYQIHEARAHG-ADMLLLIV 143 (272)
T ss_dssp -CHHHHHHH----HHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCS--SCEEEESCC-CSHHHHHHHHHTT-CSEEEEEG
T ss_pred CCHHHHHHH----HHHcCCCEEEEecChhhcCCCHHHHHHHHHhCC--CCEEECccc-cCHHHHHHHHHcC-CCEEEEec
Confidence 455555433 3445544443 3333335667888888887 888544554 4577787776655 57776632
Q ss_pred CccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCccccC
Q 013317 355 NQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTG 406 (445)
Q Consensus 355 ~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G 406 (445)
.-. ...++.++.+.|+..|+.+++.....+ + +..|...++.++-.+
T Consensus 144 a~l-~~~~l~~l~~~a~~lGl~~lvev~t~e-e----~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 144 AAL-EQSVLVSMLDRTESLGMTALVEVHTEQ-E----ADRALKAGAKVIGVN 189 (272)
T ss_dssp GGS-CHHHHHHHHHHHHHTTCEEEEEESSHH-H----HHHHHHHTCSEEEEE
T ss_pred ccC-CHHHHHHHHHHHHHCCCcEEEEcCCHH-H----HHHHHHCCCCEEEEC
Confidence 221 246788888999999999876652211 1 223334456665543
No 202
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=39.42 E-value=27 Score=36.10 Aligned_cols=68 Identities=13% Similarity=0.083 Sum_probs=49.5
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcE
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGV 377 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~ 377 (445)
-|++.+++|++.++ +||++.-- +.++++++++++...++.+.+=-.-.++-....++.++++..|+.+
T Consensus 483 ~d~~li~~l~~~~~--iPVIasGG-i~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~~~gi~~ 550 (555)
T 1jvn_A 483 YDLELIEHVKDAVK--IPVIASSG-AGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKV 550 (555)
T ss_dssp CCHHHHHHHHHHCS--SCEEECSC-CCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCC--ccEEEECC-CCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHHHCCCcc
Confidence 38999999999988 88855433 4679999999985567777765443444455666667788888864
No 203
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=38.85 E-value=2.1e+02 Score=28.67 Aligned_cols=93 Identities=16% Similarity=0.253 Sum_probs=54.6
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCc-------------cccHHHHHHHHHHHHHc
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-------------IGSVTESIEAVKMAKRA 373 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k-------------~GGit~a~~i~~~A~~~ 373 (445)
..++..+++++.++ .+||+... +.+.++++.+.+.+ +|+|.+-..- ...++...++.+.++..
T Consensus 264 ~~~e~i~~i~~~~p-~~pvi~g~--~~t~e~a~~l~~~G-~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~ 339 (494)
T 1vrd_A 264 RVIETLEMIKADYP-DLPVVAGN--VATPEGTEALIKAG-ADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKY 339 (494)
T ss_dssp HHHHHHHHHHHHCT-TSCEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCC-CceEEeCC--cCCHHHHHHHHHcC-CCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhc
Confidence 35677888998873 28875443 35689998887766 7998873210 11233344555555556
Q ss_pred CCcEEecCCCCCChhHHHHHHHhhhcCCccccC
Q 013317 374 GWGVMASHRSGETEDTFIADLSVGLATGQIKTG 406 (445)
Q Consensus 374 g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G 406 (445)
+++++.... ..+......-|+ +|+..+..|
T Consensus 340 ~ipvia~GG-I~~~~di~kala--~GAd~V~iG 369 (494)
T 1vrd_A 340 DVPIIADGG-IRYSGDIVKALA--AGAESVMVG 369 (494)
T ss_dssp TCCEEEESC-CCSHHHHHHHHH--TTCSEEEES
T ss_pred CCCEEEECC-cCCHHHHHHHHH--cCCCEEEEC
Confidence 899876553 333333333333 346555544
No 204
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=37.85 E-value=1.8e+02 Score=25.77 Aligned_cols=63 Identities=13% Similarity=0.022 Sum_probs=42.1
Q ss_pred eEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc-------cHHHHHHHHHHHHHcCCcEEecCCCCCChhH
Q 013317 323 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG-------SVTESIEAVKMAKRAGWGVMASHRSGETEDT 389 (445)
Q Consensus 323 ~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G-------Git~a~~i~~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+.|+.|+. -+....+..+. .-..|+|-||-+-+. .-.-...++.+|+..|+.++..+ .||...
T Consensus 157 ~~ialDdf-G~g~s~l~~L~-~l~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viaeG--VEt~~~ 226 (250)
T 4f3h_A 157 CKVGLEQF-GSGLDSFQLLA-HFQPAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVAEF--VADAQS 226 (250)
T ss_dssp CEEEEEEE-TSSTHHHHHHT-TSCCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEECC--CCCHHH
T ss_pred CEEEEeCC-CCCchHHHHHh-hCCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEec--cCCHHH
Confidence 99999986 45555565553 345899999943222 23335667889999999986555 566543
No 205
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=37.71 E-value=61 Score=31.76 Aligned_cols=35 Identities=3% Similarity=0.129 Sum_probs=24.5
Q ss_pred cChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHH
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAE 314 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~ 314 (445)
++.++.. .+.+.+++++|.|+=+||+.++.+-+.+
T Consensus 98 l~~e~~~-~L~~~~~~~Gi~~~stpfD~~svd~l~~ 132 (385)
T 1vli_A 98 MPAEWIL-PLLDYCREKQVIFLSTVCDEGSADLLQS 132 (385)
T ss_dssp SCGGGHH-HHHHHHHHTTCEEECBCCSHHHHHHHHT
T ss_pred CCHHHHH-HHHHHHHHcCCcEEEccCCHHHHHHHHh
Confidence 4444443 4577788899999999998766655544
No 206
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=37.49 E-value=1.7e+02 Score=25.91 Aligned_cols=109 Identities=6% Similarity=0.072 Sum_probs=69.4
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccC-HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D-~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G 358 (445)
+.+++++.... +-+.++.+||=.+...+ .+.+++++++.+ .+.+-.+-. -+.++++.+++.++ |++. .|
T Consensus 26 ~~~~~~~~~~a-l~~gGv~~iel~~k~~~~~~~i~~l~~~~~-~~~vgagtv--i~~d~~~~A~~aGA-d~v~-----~p 95 (214)
T 1wbh_A 26 KLEHAVPMAKA-LVAGGVRVLNVTLRTECAVDAIRAIAKEVP-EAIVGAGTV--LNPQQLAEVTEAGA-QFAI-----SP 95 (214)
T ss_dssp SGGGHHHHHHH-HHHTTCCEEEEESCSTTHHHHHHHHHHHCT-TSEEEEESC--CSHHHHHHHHHHTC-SCEE-----ES
T ss_pred CHHHHHHHHHH-HHHcCCCEEEEeCCChhHHHHHHHHHHHCc-CCEEeeCEE--EEHHHHHHHHHcCC-CEEE-----cC
Confidence 44567666544 45578999998875433 566777888875 255544433 34688988888875 5553 22
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcccc
Q 013317 359 SVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+ .-..+++.|+.+|+++++|..+ .++ +.-|...++.++++
T Consensus 96 ~--~d~~v~~~~~~~g~~~i~G~~t-~~e----~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 96 G--LTEPLLKAATEGTIPLIPGIST-VSE----LMLGMDYGLKEFKF 135 (214)
T ss_dssp S--CCHHHHHHHHHSSSCEEEEESS-HHH----HHHHHHTTCCEEEE
T ss_pred C--CCHHHHHHHHHhCCCEEEecCC-HHH----HHHHHHCCCCEEEE
Confidence 2 2357788888999998877532 111 23344567888776
No 207
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=37.44 E-value=97 Score=27.63 Aligned_cols=68 Identities=6% Similarity=0.063 Sum_probs=45.7
Q ss_pred cChHHHHHHHHHhhhcCCeeEEECCC----CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCE
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIEDPF----DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNA 349 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iEdP~----~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~ 349 (445)
||.++..+. .+.+++.+..+|-=-. ..-+++..+.+++.++.++||++.-- +.+.+++.++++.+ +|.
T Consensus 129 l~~~~~~~~-a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GG-I~t~~da~~~l~aG-A~~ 200 (225)
T 1mzh_A 129 LNEEEIKKA-VEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGG-IRDLETAISMIEAG-ADR 200 (225)
T ss_dssp CCHHHHHHH-HHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESS-CCSHHHHHHHHHTT-CSE
T ss_pred CCHHHHHHH-HHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECC-CCCHHHHHHHHHhC-chH
Confidence 566666654 5667778888884221 11267888899988854588843333 45799999999977 553
No 208
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=37.00 E-value=1.9e+02 Score=27.97 Aligned_cols=92 Identities=15% Similarity=0.234 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc---Ccc----------ccHHHHHHHHHHHHHcCC
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV---NQI----------GSVTESIEAVKMAKRAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~---~k~----------GGit~a~~i~~~A~~~g~ 375 (445)
.+..+++++..+ .+||++.. +.+++.++++.+.+ +|+|.+-. +.| ..++...++++.++..++
T Consensus 137 ~~~I~~ik~~~p-~v~Vi~G~--v~t~e~A~~a~~aG-AD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~i 212 (366)
T 4fo4_A 137 LQRIRETRAAYP-HLEIIGGN--VATAEGARALIEAG-VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGI 212 (366)
T ss_dssp HHHHHHHHHHCT-TCEEEEEE--ECSHHHHHHHHHHT-CSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTC
T ss_pred HHHHHHHHHhcC-CCceEeee--eCCHHHHHHHHHcC-CCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCC
Confidence 355677888872 28875543 45689998887765 78888721 111 234555666666777899
Q ss_pred cEEecCCCCCChhHHHHHHHhhhcCCccccCC
Q 013317 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
+++..... -+...... ++++++..+..|.
T Consensus 213 PVIA~GGI-~~~~di~k--ala~GAd~V~vGs 241 (366)
T 4fo4_A 213 PVIADGGI-RFSGDISK--AIAAGASCVMVGS 241 (366)
T ss_dssp CEEEESCC-CSHHHHHH--HHHTTCSEEEEST
T ss_pred eEEEeCCC-CCHHHHHH--HHHcCCCEEEECh
Confidence 98765532 22222222 3444677776665
No 209
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=36.63 E-value=36 Score=31.02 Aligned_cols=66 Identities=15% Similarity=0.005 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcE
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGV 377 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~ 377 (445)
|++.+++|++.++ +||++.=- +++++++.++.+.+ +|.+.+=-.-..+-....++.++.+..|+.+
T Consensus 188 ~~~~i~~l~~~~~--ipvia~GG-I~~~ed~~~~~~~G-adgv~vgsal~~~~~~~~~~~~~l~~~g~~~ 253 (266)
T 2w6r_A 188 DTEMIRFVRPLTT--LPIIASGG-AGKMEHFLEAFLAG-ADAALAASVFHFREIDMRELKEYLKKHGVNV 253 (266)
T ss_dssp CHHHHHHHGGGCC--SCEEEESC-CCSHHHHHHHHHHT-CSEEEESTTTC--------------------
T ss_pred CHHHHHHHHHHcC--CCEEEeCC-CCCHHHHHHHHHcC-CHHHHccHHHHcCCCCHHHHHHHHHHCCCcc
Confidence 6889999999887 88755433 56799999998754 6777765544444445666666777777764
No 210
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=36.18 E-value=1.6e+02 Score=27.92 Aligned_cols=114 Identities=17% Similarity=0.273 Sum_probs=57.1
Q ss_pred eEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhc-CCeeEE--E-----CCCCcc-CHHHH---
Q 013317 245 IVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD-HPIVSI--E-----DPFDQD-DWEHY--- 312 (445)
Q Consensus 245 i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~-~~i~~i--E-----dP~~~~-D~~~~--- 312 (445)
|.=-|++..+.||+.+ + ..+.+.+++...+++++ -+|.=| | +|++.+ +++-.
T Consensus 44 vMGIlNvTPDSFsdgg--~--------------~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pv 107 (318)
T 2vp8_A 44 IMAIVNRTPDSFYDKG--A--------------TFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPF 107 (318)
T ss_dssp EEEEEC------------------------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHH
T ss_pred EEEEEeCCCCcccCCC--c--------------cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHH
Confidence 3333677777777653 2 23566777766665554 223222 3 455432 22222
Q ss_pred -HHHHHHh-CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 013317 313 -AELTGKI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGE 385 (445)
Q Consensus 313 -~~L~~~~-~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~e 385 (445)
+.|++.+ + +||+-|-. +++-++..++.+ +++|| |++ |+ . --+++.++.++|+++++-|+.+.
T Consensus 108 I~~l~~~~~~--vpISIDT~---~~~VaeaAl~aG-a~iIN-DVs--g~-~-d~~m~~vaa~~g~~vVlmh~~G~ 171 (318)
T 2vp8_A 108 IEWLRGAYPD--QLISVDTW---RAQVAKAACAAG-ADLIN-DTW--GG-V-DPAMPEVAAEFGAGLVCAHTGGA 171 (318)
T ss_dssp HHHHHHHSTT--CEEEEECS---CHHHHHHHHHHT-CCEEE-ETT--SS-S-STTHHHHHHHHTCEEEEECC---
T ss_pred HHHHHhhCCC--CeEEEeCC---CHHHHHHHHHhC-CCEEE-ECC--CC-C-chHHHHHHHHhCCCEEEECCCCC
Confidence 4445554 5 99999953 478888888885 45554 333 22 1 33778889999999999997543
No 211
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=35.75 E-value=1.9e+02 Score=28.91 Aligned_cols=126 Identities=8% Similarity=0.049 Sum_probs=77.2
Q ss_pred CcChHHHHHHHHH-hhhcCCeeEEECCCC--ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc
Q 013317 278 KVSGDGLKNVYRS-FISDHPIVSIEDPFD--QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 278 ~~t~~~~i~~~~~-~~~~~~i~~iEdP~~--~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
.+|..+.-+. .. +.-+.++.||=-||- ++|....+++-+..+.+++|++-=......+.+...++ ++|++.+--
T Consensus 178 ~lTekD~~dl-~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~--~sDgImVaR 254 (461)
T 3qtg_A 178 TPAEEDVEAL-KAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQ--CSDYVVVAR 254 (461)
T ss_dssp SSCHHHHHHH-HHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHH--TCSEEEEEH
T ss_pred CCCHHHHHHH-HHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHH--hcccEEEcc
Confidence 4666665553 21 334567888888884 56777777766655545777554111122334445555 489999743
Q ss_pred Ccc-------ccHHHHHHHHHHHHHcCCcEEecCCCCCChh-------HHHHHHHhhh--cCCccccC
Q 013317 355 NQI-------GSVTESIEAVKMAKRAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKTG 406 (445)
Q Consensus 355 ~k~-------GGit~a~~i~~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~G 406 (445)
+.. --..--++++..|+++|.++++...+.||.. +=..|+|-|. ++..+.+.
T Consensus 255 GDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLS 322 (461)
T 3qtg_A 255 GDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLT 322 (461)
T ss_dssp HHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEEC
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEc
Confidence 222 1234457788999999999998887777643 2345666543 66666653
No 212
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=35.51 E-value=41 Score=31.00 Aligned_cols=46 Identities=11% Similarity=-0.109 Sum_probs=34.4
Q ss_pred cCHHHHHHHHHHh----CCceEEEeccccccCHHHHHHHHhcC-CCCEEEeccC
Q 013317 307 DDWEHYAELTGKI----GRHVQIVGDDLLVTNPKRVEKAIKEK-TCNALLLKVN 355 (445)
Q Consensus 307 ~D~~~~~~L~~~~----~~~~pI~gde~~~~~~~~~~~~i~~~-a~d~v~ik~~ 355 (445)
-|++.+++|++.+ + +||++.-- ++++++++++++.. .++.+.+=-.
T Consensus 188 ~d~eli~~l~~~~~~~~~--iPVIasGG-i~s~ed~~~l~~~~~G~~gvivg~a 238 (260)
T 2agk_A 188 IDELLVSKLFEWTKDYDD--LKIVYAGG-AKSVDDLKLVDELSHGKVDLTFGSS 238 (260)
T ss_dssp CCHHHHHHHHHHHTTCSS--CEEEEESC-CCCTHHHHHHHHHHTTCEEEECCTT
T ss_pred CCHHHHHHHHHhhcccCC--ceEEEeCC-CCCHHHHHHHHHhcCCCCEEEeeCC
Confidence 3899999999998 7 89844332 46799999999873 4666665444
No 213
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=35.46 E-value=41 Score=30.29 Aligned_cols=66 Identities=12% Similarity=0.033 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcE
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGV 377 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~ 377 (445)
|++.+++|++.++ +||++.=- +++++++.++.+.+ +|.+.+=-.-..+-....++.+.++..|+++
T Consensus 184 ~~~~i~~l~~~~~--ipvia~GG-I~~~~d~~~~~~~G-adgv~vgsal~~~~~~~~~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 184 DLRLTRMVAEAVG--VPVIASGG-AGRMEHFLEAFQAG-AEAALAASVFHFGEIPIPKLKRYLAEKGVHV 249 (252)
T ss_dssp CHHHHHHHHHHCS--SCEEEESC-CCSHHHHHHHHHTT-CSEEEESHHHHTTSSCHHHHHHHHHHTTCCB
T ss_pred CHHHHHHHHHHcC--CCEEEeCC-CCCHHHHHHHHHCC-CHHHHHHHHHHcCCCCHHHHHHHHHHCCCCc
Confidence 7999999999987 88754432 46799999998644 6777654322222223444555667777764
No 214
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=35.10 E-value=2e+02 Score=29.06 Aligned_cols=100 Identities=12% Similarity=0.215 Sum_probs=61.5
Q ss_pred CCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCc-------------cccHHHHHHHHH
Q 013317 302 DPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-------------IGSVTESIEAVK 368 (445)
Q Consensus 302 dP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k-------------~GGit~a~~i~~ 368 (445)
+|-...-++..++++++.+ .+||++.+. .+.+.++.+++.+ +|++.+...- ...++...++++
T Consensus 278 ~g~~~~v~~~i~~i~~~~~-~~~vi~g~v--~t~e~a~~~~~aG-ad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~ 353 (511)
T 3usb_A 278 HGHSQGVIDKVKEVRAKYP-SLNIIAGNV--ATAEATKALIEAG-ANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCAT 353 (511)
T ss_dssp CTTSHHHHHHHHHHHHHCT-TSEEEEEEE--CSHHHHHHHHHHT-CSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHH
T ss_pred ccchhhhhhHHHHHHHhCC-CceEEeeee--ccHHHHHHHHHhC-CCEEEECCCCccccccccccCCCCCcHHHHHHHHH
Confidence 3433344467788888874 378866553 4688888888776 5777753211 223566677788
Q ss_pred HHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCccccCCC
Q 013317 369 MAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 369 ~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~ 408 (445)
.++..+++++.+... -+...... |+++++..+..|.+
T Consensus 354 ~~~~~~iPVIa~GGI-~~~~di~k--ala~GA~~V~vGs~ 390 (511)
T 3usb_A 354 EARKHGIPVIADGGI-KYSGDMVK--ALAAGAHVVMLGSM 390 (511)
T ss_dssp HHHTTTCCEEEESCC-CSHHHHHH--HHHTTCSEEEESTT
T ss_pred HHHhCCCcEEEeCCC-CCHHHHHH--HHHhCchhheecHH
Confidence 888889998765533 23222222 23446777777764
No 215
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=35.09 E-value=2.6e+02 Score=28.10 Aligned_cols=95 Identities=15% Similarity=0.207 Sum_probs=58.3
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC---cc----------ccHHHHHHHHHHHHHc
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN---QI----------GSVTESIEAVKMAKRA 373 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~---k~----------GGit~a~~i~~~A~~~ 373 (445)
.-++..+++++..+ .+||++.. +.+.+.++.+++.+ +|++.+-.+ .| ..++...++++.++..
T Consensus 258 ~~~~~i~~ir~~~p-~~~Vi~g~--v~t~e~a~~l~~aG-aD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~ 333 (496)
T 4fxs_A 258 GVLQRIRETRAAYP-HLEIIGGN--VATAEGARALIEAG-VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY 333 (496)
T ss_dssp HHHHHHHHHHHHCT-TCCEEEEE--ECSHHHHHHHHHHT-CSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHCC-CceEEEcc--cCcHHHHHHHHHhC-CCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccC
Confidence 34577788888873 38886653 35688888888765 677775311 11 2345567777777788
Q ss_pred CCcEEecCCCCCChhHHHHHHHhhhcCCccccCCC
Q 013317 374 GWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 374 g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~ 408 (445)
+++++.+... -+...... |++.++..+..|..
T Consensus 334 ~iPVIa~GGI-~~~~di~k--ala~GAd~V~iGs~ 365 (496)
T 4fxs_A 334 GIPVIADGGI-RFSGDISK--AIAAGASCVMVGSM 365 (496)
T ss_dssp TCCEEEESCC-CSHHHHHH--HHHTTCSEEEESTT
T ss_pred CCeEEEeCCC-CCHHHHHH--HHHcCCCeEEecHH
Confidence 9998765532 23222222 23446777777653
No 216
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=34.73 E-value=1.4e+02 Score=31.06 Aligned_cols=125 Identities=10% Similarity=0.134 Sum_probs=77.8
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC--ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD--QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~--~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
.+|..+.-+. . +.-+.++.||=-+|- ++|....+++-+..+.+++|++-=......+.+...++ ++|++.+--+
T Consensus 190 ~ltekD~~dl-~-f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~--~sDGImVARG 265 (606)
T 3t05_A 190 GITEKDAEDI-R-FGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILE--VSDGLMVARG 265 (606)
T ss_dssp SSCHHHHHHH-H-HHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHH--HCSCEEEEHH
T ss_pred CCChhHHHHH-H-HHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHH--hCCEEEEccc
Confidence 4666665553 2 333567888888884 56777777776665555777655211122333444555 3899997322
Q ss_pred -------ccccHHHHHHHHHHHHHcCCcEEecCCCCCChh-------HHHHHHHhhh--cCCccccC
Q 013317 356 -------QIGSVTESIEAVKMAKRAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKTG 406 (445)
Q Consensus 356 -------k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~G 406 (445)
.---..--++++..|+++|.++++...+.||.. +=..|+|-|. ++..+.+.
T Consensus 266 DLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLS 332 (606)
T 3t05_A 266 DMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLS 332 (606)
T ss_dssp HHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEEC
T ss_pred cccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEec
Confidence 111223347889999999999998888788743 2345666654 67766654
No 217
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=33.20 E-value=2.3e+02 Score=26.63 Aligned_cols=125 Identities=16% Similarity=0.090 Sum_probs=72.9
Q ss_pred chHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCC--eeEEEC
Q 013317 225 SYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP--IVSIED 302 (445)
Q Consensus 225 ~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~--i~~iEd 302 (445)
.+|+.+.++.+++.++ +++.+.+-+.+ .+..+++++.+ ..++.+ -..+--
T Consensus 63 ~~Er~~v~~~~~~~~~--grvpviaGvg~-------------------------~~t~~ai~la~-~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 63 REERAQLIATARKAVG--PDFPIMAGVGA-------------------------HSTRQVLEHIN-DASVAGANYVLVLP 114 (318)
T ss_dssp HHHHHHHHHHHHHHHC--TTSCEEEECCC-------------------------SSHHHHHHHHH-HHHHHTCSEEEECC
T ss_pred HHHHHHHHHHHHHHhC--CCCcEEEeCCC-------------------------CCHHHHHHHHH-HHHHcCCCEEEEeC
Confidence 4677777777666654 46666665531 24567777644 345444 334455
Q ss_pred CC------CccC-HHHHHHHHHHhCCceEEEeccccc------cCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHH
Q 013317 303 PF------DQDD-WEHYAELTGKIGRHVQIVGDDLLV------TNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKM 369 (445)
Q Consensus 303 P~------~~~D-~~~~~~L~~~~~~~~pI~gde~~~------~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~ 369 (445)
|. .++. ++.|+.+.+.++ +||+.-+.-. -+++-+.++.+ ..-+++-+|-+ +|-+....++.+.
T Consensus 115 P~y~~kp~~~~~l~~~f~~ia~a~~--lPiilYn~P~~t~g~~l~~~~~~~La~-~~pnIvgiKds-sgd~~~~~~~~~~ 190 (318)
T 3qfe_A 115 PAYFGKATTPPVIKSFFDDVSCQSP--LPVVIYNFPGVCNGIDLDSDMITTIAR-KNPNVVGVKLT-CASVGKITRLAAT 190 (318)
T ss_dssp CCC---CCCHHHHHHHHHHHHHHCS--SCEEEEECCC----CCCCHHHHHHHHH-HCTTEEEEEES-SCCHHHHHHHHHH
T ss_pred CcccCCCCCHHHHHHHHHHHHhhCC--CCEEEEeCCcccCCCCCCHHHHHHHHh-hCCCEEEEEeC-CCCHHHHHHHHHh
Confidence 52 2222 456788888887 8886655321 13566777764 24589999986 4666666665554
Q ss_pred HHHcCCcEEecC
Q 013317 370 AKRAGWGVMASH 381 (445)
Q Consensus 370 A~~~g~~~~~~~ 381 (445)
....++.++.|+
T Consensus 191 ~~~~~f~v~~G~ 202 (318)
T 3qfe_A 191 LPPAAFSVFGGQ 202 (318)
T ss_dssp SCGGGCEEEESC
T ss_pred cCCCCEEEEEec
Confidence 333456665444
No 218
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=32.18 E-value=79 Score=30.55 Aligned_cols=35 Identities=11% Similarity=0.156 Sum_probs=24.5
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHH
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAEL 315 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L 315 (445)
+.++ .+.+.+.+++.+|.|+=.||+.++.+-+.++
T Consensus 76 ~~e~-~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~ 110 (350)
T 3g8r_A 76 QPEQ-MQKLVAEMKANGFKAICTPFDEESVDLIEAH 110 (350)
T ss_dssp CHHH-HHHHHHHHHHTTCEEEEEECSHHHHHHHHHT
T ss_pred CHHH-HHHHHHHHHHcCCcEEeccCCHHHHHHHHHc
Confidence 3444 4445777888999999999987766655443
No 219
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=31.86 E-value=1.2e+02 Score=28.48 Aligned_cols=86 Identities=9% Similarity=0.175 Sum_probs=55.2
Q ss_pred cChHHHHHHHHHhhhcCCeeEEECC--CC-----ccCHHHHHHHHHHhCCceEE--EeccccccCHHHHHHHHhcCCCCE
Q 013317 279 VSGDGLKNVYRSFISDHPIVSIEDP--FD-----QDDWEHYAELTGKIGRHVQI--VGDDLLVTNPKRVEKAIKEKTCNA 349 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~~iEdP--~~-----~~D~~~~~~L~~~~~~~~pI--~gde~~~~~~~~~~~~i~~~a~d~ 349 (445)
++.++.+. ..++..+.+..||--. |. .+|.+-++++.+..+.+++| .|. +.+.+++.++++.++.
T Consensus 185 Lt~eei~~-A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGG---Irt~edAl~mi~aGA~-- 258 (288)
T 3oa3_A 185 LTADEIIA-GCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGG---IRTIEDCVKMVRAGAE-- 258 (288)
T ss_dssp CCHHHHHH-HHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESS---CCSHHHHHHHHHTTCS--
T ss_pred CCHHHHHH-HHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCC---CCCHHHHHHHHHcCCc--
Confidence 46666555 4666777888888765 22 23666666666533445777 444 3578999999998874
Q ss_pred EEeccCccccHHHHHHHHHHHHHcCCcE
Q 013317 350 LLLKVNQIGSVTESIEAVKMAKRAGWGV 377 (445)
Q Consensus 350 v~ik~~k~GGit~a~~i~~~A~~~g~~~ 377 (445)
++| .|...+|.+-++..|...
T Consensus 259 ------RiG-tS~g~~I~~~~~~~~~~~ 279 (288)
T 3oa3_A 259 ------RLG-ASAGVKIVNETRLGNRQV 279 (288)
T ss_dssp ------EEE-ESCHHHHHHHHTC-----
T ss_pred ------eee-hhhHHHHHHHHHhcCCCC
Confidence 555 488888888887777653
No 220
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=31.56 E-value=1.2e+02 Score=30.75 Aligned_cols=125 Identities=15% Similarity=0.163 Sum_probs=75.0
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC--ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD--QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~--~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
.+|..+.-+. .++.-+.++.||=-||- ++|....+++-...+.+++|++-=......+.+...++ ++|++.+--+
T Consensus 204 ~lTekD~~Dl-~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~--~sDgimVaRG 280 (511)
T 3gg8_A 204 VIGEKDKHDI-LNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILA--EADGIMIARG 280 (511)
T ss_dssp SSCHHHHHHH-HHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHH--HCSCEEEEHH
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHH--hCCeEEEecc
Confidence 4666665543 13445678899999985 46666666665544335777554111112233444444 3699998322
Q ss_pred ccc---cH----HHHHHHHHHHHHcCCcEEecCCCCCChh-------HHHHHHHhhh--cCCcccc
Q 013317 356 QIG---SV----TESIEAVKMAKRAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKT 405 (445)
Q Consensus 356 k~G---Gi----t~a~~i~~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~ 405 (445)
..| ++ .--++++..|+++|.++++...+.||.. +=..|+|-|. ++..+.+
T Consensus 281 DLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavML 346 (511)
T 3gg8_A 281 DLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVML 346 (511)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEE
T ss_pred hhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEe
Confidence 111 22 2347788899999999999888888743 2345666654 6666655
No 221
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=31.40 E-value=61 Score=29.83 Aligned_cols=71 Identities=14% Similarity=0.125 Sum_probs=41.6
Q ss_pred HHHHHhcCCCCEEEeccCc-cc----cHHHHHHHHHHHHHcCCcEEecCCCCC-------Ch--hHHHHHHHhhhcCCcc
Q 013317 338 VEKAIKEKTCNALLLKVNQ-IG----SVTESIEAVKMAKRAGWGVMASHRSGE-------TE--DTFIADLSVGLATGQI 403 (445)
Q Consensus 338 ~~~~i~~~a~d~v~ik~~k-~G----Git~a~~i~~~A~~~g~~~~~~~~~~e-------t~--~~~~~~la~a~~~~~~ 403 (445)
++++++. .+|.|++-++- .+ -+.++.++.+.|+.+|+++++-+.... +. ...++.+|...++.|+
T Consensus 98 ve~Ai~~-Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~v 176 (263)
T 1w8s_A 98 VEEAVSL-GASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAM 176 (263)
T ss_dssp HHHHHHT-TCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHC-CCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEE
Confidence 4455544 35666664421 11 144567777788888888766542200 22 2334677888888888
Q ss_pred ccCCCC
Q 013317 404 KTGAPC 409 (445)
Q Consensus 404 ~~G~~~ 409 (445)
|.+.+.
T Consensus 177 kt~~~~ 182 (263)
T 1w8s_A 177 KIKYTG 182 (263)
T ss_dssp EEECCS
T ss_pred EEcCCC
Confidence 888653
No 222
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=31.22 E-value=3e+02 Score=24.92 Aligned_cols=116 Identities=9% Similarity=-0.013 Sum_probs=63.0
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccC-------------------------HHHHHHHHHHh-CCceEEEecccccc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDD-------------------------WEHYAELTGKI-GRHVQIVGDDLLVT 333 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D-------------------------~~~~~~L~~~~-~~~~pI~gde~~~~ 333 (445)
+.++.++.+ +.+++.+..+||=-+|..| ++..+++++.+ + +|+..- .+.+
T Consensus 29 ~~~~~~~~~-~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~--~Pi~~m-~y~n 104 (262)
T 2ekc_A 29 DYETSLKAF-KEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPD--IPFLLM-TYYN 104 (262)
T ss_dssp CHHHHHHHH-HHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--SCEEEE-CCHH
T ss_pred ChHHHHHHH-HHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCC--CCEEEE-ecCc
Confidence 456677764 4567788777774333222 13467777776 5 777541 1111
Q ss_pred -----CHHH-HHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcccc
Q 013317 334 -----NPKR-VEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 334 -----~~~~-~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
..+. ++.+.+.++--++.+|+. +.+..+..+.|+++|+.++.-. ...+....+..++-. ...|+..
T Consensus 105 ~v~~~g~~~f~~~~~~aG~dgvii~dl~----~ee~~~~~~~~~~~gl~~i~l~-~p~t~~~rl~~ia~~-a~gfiy~ 176 (262)
T 2ekc_A 105 PIFRIGLEKFCRLSREKGIDGFIVPDLP----PEEAEELKAVMKKYVLSFVPLG-APTSTRKRIKLICEA-ADEMTYF 176 (262)
T ss_dssp HHHHHCHHHHHHHHHHTTCCEEECTTCC----HHHHHHHHHHHHHTTCEECCEE-CTTCCHHHHHHHHHH-CSSCEEE
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEECCCC----HHHHHHHHHHHHHcCCcEEEEe-CCCCCHHHHHHHHHh-CCCCEEE
Confidence 1133 344555554335556554 4788889999999998752211 122333444444333 3455544
No 223
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=31.14 E-value=87 Score=28.62 Aligned_cols=93 Identities=17% Similarity=0.170 Sum_probs=62.3
Q ss_pred cChHHHHHHHHHhhhcCC---eeEE-ECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc
Q 013317 279 VSGDGLKNVYRSFISDHP---IVSI-EDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~---i~~i-EdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
.++.++.+.| ++.+ |..+ ++.+-....+.++.+++.++ +||.-.+. +.+..++..+.+. .+|.|.+-.
T Consensus 65 ~~p~~~A~~~----~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~--lPvl~kdf-I~d~~qi~~a~~~-GAD~VlL~~ 136 (254)
T 1vc4_A 65 VDPVEAALAY----ARGGARAVSVLTEPHRFGGSLLDLKRVREAVD--LPLLRKDF-VVDPFMLEEARAF-GASAALLIV 136 (254)
T ss_dssp CCHHHHHHHH----HHTTCSEEEEECCCSSSCCCHHHHHHHHHHCC--SCEEEESC-CCSHHHHHHHHHT-TCSEEEEEH
T ss_pred CCHHHHHHHH----HHcCCCEEEEecchhhhccCHHHHHHHHHhcC--CCEEECCc-CCCHHHHHHHHHc-CCCEEEECc
Confidence 4555554433 3444 4443 44455568899999999988 99844444 5678788776554 467777765
Q ss_pred CccccHHHHHHHHHHHHHcCCcEEecC
Q 013317 355 NQIGSVTESIEAVKMAKRAGWGVMASH 381 (445)
Q Consensus 355 ~k~GGit~a~~i~~~A~~~g~~~~~~~ 381 (445)
.-.. ..+.++...|+..|+.+++-.
T Consensus 137 ~~l~--~~l~~l~~~a~~lGl~~lvev 161 (254)
T 1vc4_A 137 ALLG--ELTGAYLEEARRLGLEALVEV 161 (254)
T ss_dssp HHHG--GGHHHHHHHHHHHTCEEEEEE
T ss_pred cchH--HHHHHHHHHHHHCCCeEEEEE
Confidence 5443 578888888999999976554
No 224
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=31.07 E-value=2.6e+02 Score=28.15 Aligned_cols=108 Identities=17% Similarity=0.215 Sum_probs=64.8
Q ss_pred hcCCeeEEECCCCc----cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCc-----------c
Q 013317 293 SDHPIVSIEDPFDQ----DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-----------I 357 (445)
Q Consensus 293 ~~~~i~~iEdP~~~----~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k-----------~ 357 (445)
.+.++..||=-... ..++-.+++++.++ .+||++.+. .+.+.++.+.+.+ +|++.+-..- .
T Consensus 264 ~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~-~~pvi~~~v--~t~~~a~~l~~aG-ad~I~vg~~~G~~~~t~~~~~~ 339 (514)
T 1jcn_A 264 TQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYP-HLQVIGGNV--VTAAQAKNLIDAG-VDGLRVGMGCGSICITQEVMAC 339 (514)
T ss_dssp HHTTCSEEEECCSCCCSHHHHHHHHHHHHHCT-TCEEEEEEE--CSHHHHHHHHHHT-CSEEEECSSCSCCBTTBCCCSC
T ss_pred HHcCCCEEEeeccCCcchhHHHHHHHHHHhCC-CCceEeccc--chHHHHHHHHHcC-CCEEEECCCCCcccccccccCC
Confidence 34666667621221 22466788888882 389876543 5688888888776 7888773210 1
Q ss_pred c--cHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCccccCC
Q 013317 358 G--SVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 358 G--Git~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
| ..+....+.++++..+++++.... ..+......-| ++++..+..|.
T Consensus 340 g~~~~~~~~~~~~~~~~~~ipVia~GG-I~~~~di~kal--a~GAd~V~iG~ 388 (514)
T 1jcn_A 340 GRPQGTAVYKVAEYARRFGVPIIADGG-IQTVGHVVKAL--ALGASTVMMGS 388 (514)
T ss_dssp CCCHHHHHHHHHHHHGGGTCCEEEESC-CCSHHHHHHHH--HTTCSEEEEST
T ss_pred CccchhHHHHHHHHHhhCCCCEEEECC-CCCHHHHHHHH--HcCCCeeeECH
Confidence 2 245566677778888999876553 23333332333 34566666555
No 225
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=30.96 E-value=2e+02 Score=27.50 Aligned_cols=107 Identities=13% Similarity=0.138 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHHhcCCCcceEEEEecc--ccccccc-------------cCcceeecccCCCCCCCCCcChHHHHHHHHH
Q 013317 226 YEGFELLKTAIAKGGYIGKIVIGMDVA--ASEFYDR-------------KDKTYDLNFKEENNDGSQKVSGDGLKNVYRS 290 (445)
Q Consensus 226 ~~~l~~v~~ai~~~G~~~~i~l~vD~~--a~~~~~~-------------~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~ 290 (445)
.-++.+||+++.+.|+. ++.||-=.+ +|.||.+ ++..|+.+.. +..|+++....
T Consensus 187 DGrV~aIR~aLd~~G~~-~v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpa----------N~~EAlrE~~l 255 (356)
T 3obk_A 187 DGRVSAIRESLDMEGCT-DTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPS----------NSREAEREAEA 255 (356)
T ss_dssp TTHHHHHHHHHHHTTCT-TSEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTT----------CSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHCCCC-CcceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCC----------CHHHHHHHHHh
Confidence 45788999999999984 677764322 4555532 2456776532 34566655433
Q ss_pred hhh-cCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCC
Q 013317 291 FIS-DHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 291 ~~~-~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
-++ -.++.++-=-++- ++-.+++++++. +|+++-..+ .-..-++...++++.|
T Consensus 256 Di~EGAD~vMVKPal~Y--LDIi~~vk~~~~--~PvaaYqVS-GEYAMikAAa~~GwiD 309 (356)
T 3obk_A 256 DASEGADMLMVKPGLPY--LDVLAKIREKSK--LPMVAYHVS-GEYAMLKAAAEKGYIS 309 (356)
T ss_dssp HHHTTCSEEEEESSGGG--HHHHHHHHHHCS--SCEEEEECH-HHHHHHHHHHHHTSSC
T ss_pred hHhcCCCEEEecCCCcH--HHHHHHHHhcCC--CCEEEEEcc-HHHHHHHHHHHcCCcc
Confidence 333 3668888755653 566788888887 999887653 2233445566667666
No 226
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=30.80 E-value=3.3e+02 Score=25.90 Aligned_cols=107 Identities=11% Similarity=0.094 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHhcCCCcceEEEEecc--ccccccc--------------cCcceeecccCCCCCCCCCcChHHHHHHHH
Q 013317 226 YEGFELLKTAIAKGGYIGKIVIGMDVA--ASEFYDR--------------KDKTYDLNFKEENNDGSQKVSGDGLKNVYR 289 (445)
Q Consensus 226 ~~~l~~v~~ai~~~G~~~~i~l~vD~~--a~~~~~~--------------~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~ 289 (445)
.-++.+||+++.+.|+. ++.||-=.+ +|.||.+ ++..|+.+.. +..|+++...
T Consensus 179 DGrV~aIR~aLd~~G~~-~v~ImsYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpa----------N~~EAlrE~~ 247 (337)
T 1w5q_A 179 DGRIGAIREALESAGHT-NVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPA----------NSDEALHEVA 247 (337)
T ss_dssp TTHHHHHHHHHHHTTCT-TCEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTT----------CSHHHHHHHH
T ss_pred ccHHHHHHHHHHHCCCC-CceeehhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCC----------ChHHHHHHHH
Confidence 45788999999999984 677763222 4455531 2346776632 2356665543
Q ss_pred Hhhh-cCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCC
Q 013317 290 SFIS-DHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 290 ~~~~-~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
.-++ -.++.++-=-++- ++-.+++++++. +|+++-..+ .-..-++...++++.|
T Consensus 248 ~Di~EGAD~vMVKPal~Y--LDIir~vk~~~~--~PvaaYqVS-GEYAMikaAa~~GwiD 302 (337)
T 1w5q_A 248 ADLAEGADMVMVKPGMPY--LDIVRRVKDEFR--APTFVYQVS-GEYAMHMGAIQNGWLA 302 (337)
T ss_dssp HHHHTTCSEEEEESCGGG--HHHHHHHHHHHC--SCEEEEECH-HHHHHHHHHHHTTSSC
T ss_pred hhHHhCCCEEEEcCCCch--HHHHHHHHHhcC--CCEEEEEcC-cHHHHHHHHHHcCCcc
Confidence 3333 3668878755653 567899999998 999887653 2234455566677766
No 227
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=30.47 E-value=2.9e+02 Score=24.51 Aligned_cols=63 Identities=14% Similarity=0.118 Sum_probs=40.3
Q ss_pred eEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccH-------HHHHHHHHHHHHcCCcEEecCCCCCChhH
Q 013317 323 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSV-------TESIEAVKMAKRAGWGVMASHRSGETEDT 389 (445)
Q Consensus 323 ~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGi-------t~a~~i~~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+.|+.|+. -+....+..+.. -..|+|.||.+-+-.+ .-...++.+|+..|++++..+ .||...
T Consensus 153 ~~ialDdf-G~g~ssl~~L~~-l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viaeG--VEt~~~ 222 (259)
T 3s83_A 153 AGLALDDF-GTGFSSLSYLTR-LPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEG--VENAEM 222 (259)
T ss_dssp CEEEEECC----CHHHHHHHH-SCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEECC--CCSHHH
T ss_pred CEEEEECC-CCCchhHHHHHh-CCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEEe--CCCHHH
Confidence 99999986 344455554433 3579999996433222 225667889999999986555 576543
No 228
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=30.30 E-value=2e+02 Score=26.89 Aligned_cols=63 Identities=10% Similarity=0.081 Sum_probs=46.1
Q ss_pred HHHhhhcC--CeeEEECCCCccCHHHHHHHHHHh--CCceEE-EeccccccCHHHHHHHHhcCCCCEEEeccC
Q 013317 288 YRSFISDH--PIVSIEDPFDQDDWEHYAELTGKI--GRHVQI-VGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 288 ~~~~~~~~--~i~~iEdP~~~~D~~~~~~L~~~~--~~~~pI-~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
|...-+++ .+.++|---.+.+.+-.+++++.+ . +|| +|.- ++++++++++++.+ +|.|.+--.
T Consensus 191 Ya~~gad~G~~lV~LD~~~~~v~~e~V~~I~~~~~~~--iPV~vGGG--Irs~Eda~~ll~aG-AD~VVVGSA 258 (286)
T 3vk5_A 191 YLHVARAFGFHMVYLYSRNEHVPPEVVRHFRKGLGPD--QVLFVSGN--VRSGRQVTEYLDSG-ADYVGFAGA 258 (286)
T ss_dssp HHHHHHHTTCSEEEEECSSSCCCHHHHHHHHHHSCTT--CEEEEESS--CCSHHHHHHHHHTT-CSEEEESGG
T ss_pred HHHHHHHcCCCEEEEcCCCCcCCHHHHHHHHHhcCCC--CCEEEEeC--CCCHHHHHHHHHcC-CCEEEECch
Confidence 44444554 478888555566788999999998 6 887 5654 46799999999877 788877543
No 229
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=30.03 E-value=2.6e+02 Score=23.86 Aligned_cols=93 Identities=11% Similarity=0.010 Sum_probs=58.0
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCC---ccCHHHHHHHHHHh-CCceEEEeccccccC-HHHHHHHHhcCCCCEEEecc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFD---QDDWEHYAELTGKI-GRHVQIVGDDLLVTN-PKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~---~~D~~~~~~L~~~~-~~~~pI~gde~~~~~-~~~~~~~i~~~a~d~v~ik~ 354 (445)
+.+++++.+.+ +.+ ++.|||=-++ .+-.+..++|++.+ + .||..|=- +.+ ++.+.+....-.+|++.+.+
T Consensus 11 ~~~~~~~~~~~-~~~-~v~~iev~~~~~~~~g~~~i~~l~~~~~~--~~i~~~l~-~~di~~~~~~~a~~~Gad~v~vh~ 85 (207)
T 3ajx_A 11 STEAALELAGK-VAE-YVDIIELGTPLIKAEGLSVITAVKKAHPD--KIVFADMK-TMDAGELEADIAFKAGADLVTVLG 85 (207)
T ss_dssp CHHHHHHHHHH-HGG-GCSEEEECHHHHHHHCTHHHHHHHHHSTT--SEEEEEEE-ECSCHHHHHHHHHHTTCSEEEEET
T ss_pred CHHHHHHHHHH-hhc-cCCEEEECcHHHHhhCHHHHHHHHHhCCC--CeEEEEEE-ecCccHHHHHHHHhCCCCEEEEec
Confidence 56777777554 454 5677775432 23355678888886 4 78776533 345 56644444445689998877
Q ss_pred CccccHHHHHHHHHHHHHcCCcEEe
Q 013317 355 NQIGSVTESIEAVKMAKRAGWGVMA 379 (445)
Q Consensus 355 ~k~GGit~a~~i~~~A~~~g~~~~~ 379 (445)
... -....++.+.++++|+.+.+
T Consensus 86 ~~~--~~~~~~~~~~~~~~g~~~gv 108 (207)
T 3ajx_A 86 SAD--DSTIAGAVKAAQAHNKGVVV 108 (207)
T ss_dssp TSC--HHHHHHHHHHHHHHTCEEEE
T ss_pred cCC--hHHHHHHHHHHHHcCCceEE
Confidence 642 23455667778888988644
No 230
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=30.00 E-value=2.9e+02 Score=24.34 Aligned_cols=41 Identities=12% Similarity=0.225 Sum_probs=31.4
Q ss_pred HHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc
Q 013317 310 EHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 310 ~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
+..+++++.++ +|+..+-. +++++++..+++.+ +|.|.+-.
T Consensus 65 ~~i~~i~~~~~--ipv~v~gg-I~~~~~~~~~l~~G-ad~V~lg~ 105 (244)
T 1vzw_A 65 ALIAEVAQAMD--IKVELSGG-IRDDDTLAAALATG-CTRVNLGT 105 (244)
T ss_dssp HHHHHHHHHCS--SEEEEESS-CCSHHHHHHHHHTT-CSEEEECH
T ss_pred HHHHHHHHhcC--CcEEEECC-cCCHHHHHHHHHcC-CCEEEECc
Confidence 77888998887 89855433 46799999999877 78887644
No 231
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=29.63 E-value=1.5e+02 Score=26.56 Aligned_cols=109 Identities=6% Similarity=0.076 Sum_probs=69.6
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCcc-CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccc
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQD-DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~-D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G 358 (445)
+.+++++.... +-+.++.+||=.+... ..+.+++|+++.+ .+.+-.+-. . +.+++..+++.++ |++. .|
T Consensus 36 ~~~~~~~~~~a-l~~gGv~~iel~~k~~~~~~~i~~l~~~~~-~~~igagtv-l-~~d~~~~A~~aGA-d~v~-----~p 105 (225)
T 1mxs_A 36 REEDILPLADA-LAAGGIRTLEVTLRSQHGLKAIQVLREQRP-ELCVGAGTV-L-DRSMFAAVEAAGA-QFVV-----TP 105 (225)
T ss_dssp CGGGHHHHHHH-HHHTTCCEEEEESSSTHHHHHHHHHHHHCT-TSEEEEECC-C-SHHHHHHHHHHTC-SSEE-----CS
T ss_pred CHHHHHHHHHH-HHHCCCCEEEEecCCccHHHHHHHHHHhCc-ccEEeeCeE-e-eHHHHHHHHHCCC-CEEE-----eC
Confidence 45567766544 4567899999887533 3456677888875 355544543 3 5688888888875 5553 23
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcccc
Q 013317 359 SVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+. -..+.+.|+.+|+++++|..+. ++ +.-|...++.++++
T Consensus 106 ~~--d~~v~~~~~~~g~~~i~G~~t~-~e----~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 106 GI--TEDILEAGVDSEIPLLPGISTP-SE----IMMGYALGYRRFKL 145 (225)
T ss_dssp SC--CHHHHHHHHHCSSCEECEECSH-HH----HHHHHTTTCCEEEE
T ss_pred CC--CHHHHHHHHHhCCCEEEeeCCH-HH----HHHHHHCCCCEEEE
Confidence 32 3577888899999988775321 11 23345567888877
No 232
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=29.24 E-value=1.5e+02 Score=29.79 Aligned_cols=91 Identities=14% Similarity=0.219 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC-----------c--cccHHHHHHHHHHHHHcCC
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN-----------Q--IGSVTESIEAVKMAKRAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~-----------k--~GGit~a~~i~~~A~~~g~ 375 (445)
++..+.|++... +|+++.+. .++++.+.++ .+|.+.+-.. . ...++....+.+++++.++
T Consensus 257 L~~I~~l~~~~~--vpvi~k~v--~~~~~a~~l~---G~d~v~vg~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~v 329 (486)
T 2cu0_A 257 IKSMKEMRQKVD--ADFIVGNI--ANPKAVDDLT---FADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGL 329 (486)
T ss_dssp HHHHHHHHHTCC--SEEEEEEE--CCHHHHTTCT---TSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHhC--CccccCCc--CCHHHHHHhh---CCCeEEEeeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCC
Confidence 345577777776 99988875 3578777766 6888877221 0 1234556666777788899
Q ss_pred cEEecCCCCCChhHHHHHHHhhhcCCccccCCCC
Q 013317 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGAPC 409 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~~ 409 (445)
+++.... .-+....... +++++..+..|.+.
T Consensus 330 pVia~GG-i~~~~di~ka--lalGA~~v~~g~~~ 360 (486)
T 2cu0_A 330 YVIADGG-IRYSGDIVKA--IAAGADAVMLGNLL 360 (486)
T ss_dssp EEEEESC-CCSHHHHHHH--HHTTCSEEEESTTT
T ss_pred cEEecCC-CCCHHHHHHH--HHcCCCceeeChhh
Confidence 9876553 2333333333 34678888877754
No 233
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=29.18 E-value=72 Score=29.90 Aligned_cols=95 Identities=18% Similarity=0.123 Sum_probs=58.1
Q ss_pred ccccCHHHHHHHHhcCCCCEEEeccC-ccccHHHHHHHHHHHHHc-CCcE--EecCCCCCC-----hhH---HHHHHHhh
Q 013317 330 LLVTNPKRVEKAIKEKTCNALLLKVN-QIGSVTESIEAVKMAKRA-GWGV--MASHRSGET-----EDT---FIADLSVG 397 (445)
Q Consensus 330 ~~~~~~~~~~~~i~~~a~d~v~ik~~-k~GGit~a~~i~~~A~~~-g~~~--~~~~~~~et-----~~~---~~~~la~a 397 (445)
.++.+.+++..+.+.+| |-|.+.-+ -.||+|+.....+.+++. .+++ |+-.+.++. +.. .-+.++..
T Consensus 44 vc~~s~~~a~~A~~gGA-dRIELc~~l~~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~ 122 (287)
T 3iwp_A 44 VCVDSVESAVNAERGGA-DRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp EEESSHHHHHHHHHHTC-SEEEECBCGGGTCBCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHhCC-CEEEECCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHH
Confidence 44556778877776654 77776633 579999999888888764 4444 554443422 111 23456667
Q ss_pred hcCCccccCCCC--CchhHHHHHHHHHHHH
Q 013317 398 LATGQIKTGAPC--RSERLAKYNQLLRIEE 425 (445)
Q Consensus 398 ~~~~~~~~G~~~--~~er~~k~n~ll~i~~ 425 (445)
.++.-+.+|.+. ..--.....+|++...
T Consensus 123 ~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~ 152 (287)
T 3iwp_A 123 YGADGLVFGALTEDGHIDKELCMSLMAICR 152 (287)
T ss_dssp TTCSEEEECCBCTTSCBCHHHHHHHHHHHT
T ss_pred cCCCEEEEeeeCCCCCcCHHHHHHHHHHcC
Confidence 788889998753 2224444555666543
No 234
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=29.12 E-value=2.7e+02 Score=27.04 Aligned_cols=91 Identities=9% Similarity=0.189 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEecc-----------Ccccc--HHHHHHHHHHHHHcCC
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV-----------NQIGS--VTESIEAVKMAKRAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~-----------~k~GG--it~a~~i~~~A~~~g~ 375 (445)
++-.+++++.++ .+||+... +.++++++.+.+.+ +|+|.+-. ...|+ ++...++.+.++..++
T Consensus 182 ~e~i~~ir~~~~-~~pviv~~--v~~~~~a~~a~~~G-ad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~i 257 (404)
T 1eep_A 182 IELIKKIKTKYP-NLDLIAGN--IVTKEAALDLISVG-ADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNI 257 (404)
T ss_dssp HHHHHHHHHHCT-TCEEEEEE--ECSHHHHHHHHTTT-CSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHCC-CCeEEEcC--CCcHHHHHHHHhcC-CCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCc
Confidence 455577788872 28887433 34688888877665 79988821 11122 3334445555555689
Q ss_pred cEEecCCCCCChhHHHHHHHhhhcCCccccC
Q 013317 376 GVMASHRSGETEDTFIADLSVGLATGQIKTG 406 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G 406 (445)
+++.... ..+......-|+ +++..+..|
T Consensus 258 pVia~GG-I~~~~d~~~ala--~GAd~V~iG 285 (404)
T 1eep_A 258 CIIADGG-IRFSGDVVKAIA--AGADSVMIG 285 (404)
T ss_dssp EEEEESC-CCSHHHHHHHHH--HTCSEEEEC
T ss_pred eEEEECC-CCCHHHHHHHHH--cCCCHHhhC
Confidence 9865553 333333333333 345555544
No 235
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=29.01 E-value=3.1e+02 Score=25.66 Aligned_cols=108 Identities=19% Similarity=0.259 Sum_probs=64.6
Q ss_pred cChHHHHHHHHHhhhcCCee--EE---ECCCCc---cC-HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCE
Q 013317 279 VSGDGLKNVYRSFISDHPIV--SI---EDPFDQ---DD-WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNA 349 (445)
Q Consensus 279 ~t~~~~i~~~~~~~~~~~i~--~i---EdP~~~---~D-~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~ 349 (445)
++.+++++.+.+ +.+.++. .| |.|... ++ .+-++.+++..+ +.|...-- ..+.+.++++.+.+ +|.
T Consensus 91 ls~eei~~~~~~-~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~--i~i~~s~g-~~~~e~l~~L~~aG-~~~ 165 (350)
T 3t7v_A 91 LTMEEIKETCKT-LKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELG--LPIMISPG-LMDNATLLKAREKG-ANF 165 (350)
T ss_dssp CCHHHHHHHHHH-HTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHC--SCEEEECS-SCCHHHHHHHHHTT-EEE
T ss_pred CCHHHHHHHHHH-HHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcC--ceEEEeCC-CCCHHHHHHHHHcC-CCE
Confidence 688998887554 4445532 23 566532 22 234455665665 55533211 13467777777665 666
Q ss_pred EEecc-----------CccccHHHHHHHHHHHHHcCCcE----EecCCCCCChhHHHHH
Q 013317 350 LLLKV-----------NQIGSVTESIEAVKMAKRAGWGV----MASHRSGETEDTFIAD 393 (445)
Q Consensus 350 v~ik~-----------~k~GGit~a~~i~~~A~~~g~~~----~~~~~~~et~~~~~~~ 393 (445)
+.+.+ ++-....+.++.++.|++.|+++ |+|+ +||.....-+
T Consensus 166 i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~e~~~~~ 222 (350)
T 3t7v_A 166 LALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGV--GNDIESTILS 222 (350)
T ss_dssp EECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESS--SCCHHHHHHH
T ss_pred EEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeec--CCCHHHHHHH
Confidence 66443 23457889999999999999885 3455 6775544333
No 236
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=28.69 E-value=1.9e+02 Score=29.71 Aligned_cols=124 Identities=13% Similarity=0.198 Sum_probs=74.3
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC--ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD--QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~--~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
.+|..+..+. . +.-+.++.||=-||- ++|....+++-...+.+++|++-=......+.+...++. +|++.+--+
T Consensus 239 alTekD~~dl-~-f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~--sDgImVaRG 314 (550)
T 3gr4_A 239 AVSEKDIQDL-K-FGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEA--SDGIMVARG 314 (550)
T ss_dssp SSCHHHHHHH-H-HHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHH--SSEEEEEHH
T ss_pred CCCHHHHHHH-H-HHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHh--CCEEEEccc
Confidence 4566665553 2 334567888888985 456666665554444457775531111223334445543 799997332
Q ss_pred cc-------ccHHHHHHHHHHHHHcCCcEEecCCCCCChh-------HHHHHHHhhh--cCCcccc
Q 013317 356 QI-------GSVTESIEAVKMAKRAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKT 405 (445)
Q Consensus 356 k~-------GGit~a~~i~~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~ 405 (445)
.. .-..--++++..|+++|.++++...+.||.. +=..|+|-|. ++..+.+
T Consensus 315 DLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~DavML 380 (550)
T 3gr4_A 315 DLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIML 380 (550)
T ss_dssp HHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEE
T ss_pred hhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEE
Confidence 21 1123347788999999999998888888743 2355776664 7776654
No 237
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=28.65 E-value=1.1e+02 Score=27.93 Aligned_cols=56 Identities=16% Similarity=0.155 Sum_probs=38.8
Q ss_pred CCeeEEECCC---CccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec
Q 013317 295 HPIVSIEDPF---DQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 295 ~~i~~iEdP~---~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
.++.-++-+= ..-|++...+|....+..++++. |+-++++++++++.+. +|+|.+=
T Consensus 172 ~~iIGinnr~l~t~~~d~~~~~~l~~~ip~~~~vIa-EsGI~t~edv~~~~~~--a~avLVG 230 (251)
T 1i4n_A 172 PKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVA-ESGIKDPRELKDLRGK--VNAVLVG 230 (251)
T ss_dssp CSEEEEECBCTTTCCBCTTHHHHHGGGSCTTSEEEE-ESCCCCGGGHHHHTTT--CSEEEEC
T ss_pred CCEEEEeCcccccCCCCHHHHHHHHHhCCCCCEEEE-eCCCCCHHHHHHHHHh--CCEEEEc
Confidence 3455555421 12367788888888865577766 4557889999999776 8998874
No 238
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=28.16 E-value=49 Score=29.76 Aligned_cols=66 Identities=15% Similarity=0.007 Sum_probs=42.8
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcE
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGV 377 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~ 377 (445)
|++.+++|++.++ +||+++=- +++++++.++.+.+ +|.+.+=-.-.++-....++.+..+..|+.+
T Consensus 183 ~~~~~~~l~~~~~--ipvia~GG-I~~~~d~~~~~~~G-adgv~vGsal~~~~~~~~~~~~~l~~~g~~~ 248 (253)
T 1thf_D 183 DTEMIRFVRPLTT--LPIIASGG-AGKMEHFLEAFLAG-ADAALAASVFHFREIDVRELKEYLKKHGVNV 248 (253)
T ss_dssp CHHHHHHHGGGCC--SCEEEESC-CCSHHHHHHHHHTT-CSEEEESHHHHTTCSCHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHhcC--CCEEEECC-CCCHHHHHHHHHcC-ChHHHHHHHHHcCCCCHHHHHHHHHHcCCcc
Confidence 7899999998876 88855543 56789999998744 6776654222222112444455567778764
No 239
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=27.75 E-value=2.8e+02 Score=25.64 Aligned_cols=115 Identities=15% Similarity=0.167 Sum_probs=64.3
Q ss_pred ceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEE----------CCCCccCHHHHH
Q 013317 244 KIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIE----------DPFDQDDWEHYA 313 (445)
Q Consensus 244 ~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iE----------dP~~~~D~~~~~ 313 (445)
.+.=-+++-.+.||+.+ + ..+.+++++...+++++ +-.+|. +|++.+ +.++
T Consensus 8 ~iMGIlNvTPDSFsDGG--~--------------~~~~~~a~~~a~~m~~~-GAdiIDIGgeSTRPga~~vs~e--eE~~ 68 (270)
T 4hb7_A 8 KIMGILNVTPDSFSDGG--K--------------FNNVETAINRVKAMIDE-GADIIDVGGVSTRPGHEMVTLE--EELN 68 (270)
T ss_dssp EEEEEEECC--------------------------CHHHHHHHHHHHHHHT-TCSEEEEESCCCSTTCCCCCHH--HHHH
T ss_pred eEEEEEeCCCCCCCCCC--C--------------CCCHHHHHHHHHHHHHC-CCCEEEECCccCCCCCCCCchH--HHHH
Confidence 34434688888887753 2 34667788876666654 333332 456543 4455
Q ss_pred HHHH---Hh-CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 013317 314 ELTG---KI-GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGE 385 (445)
Q Consensus 314 ~L~~---~~-~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~e 385 (445)
++.- .+ ...+||.-|-. .++-++..++.++ ++|| |++ ||..+ -+++.++.++++++++-|+.+.
T Consensus 69 Rv~pvi~~l~~~~v~iSIDT~---~~~Va~~al~aGa-~iIN-DVs--~g~~d-~~m~~~va~~~~~~vlMH~~~~ 136 (270)
T 4hb7_A 69 RVLPVVEAIVGFDVKISVDTF---RSEVAEACLKLGV-DMIN-DQW--AGLYD-HRMFQIVAKYDAEIILMHNGNG 136 (270)
T ss_dssp HHHHHHHHHTTSSSEEEEECS---CHHHHHHHHHHTC-CEEE-ETT--TTSSC-THHHHHHHHTTCEEEEECCCSS
T ss_pred HHHHHHHHhhcCCCeEEEECC---CHHHHHHHHHhcc-ceec-ccc--ccccc-hhHHHHHHHcCCCeEEeccccC
Confidence 4432 22 12499999953 3677777888764 7776 222 33222 3577888899999999997553
No 240
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=27.44 E-value=1.6e+02 Score=28.53 Aligned_cols=40 Identities=10% Similarity=0.269 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEe
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
+++...++++.++ +||+... +.++++++.+++.+ +|+|.+
T Consensus 199 ~~~~i~~l~~~~~--~pvi~gg--i~t~e~a~~~~~~G-ad~i~v 238 (393)
T 2qr6_A 199 EALNLKEFIGSLD--VPVIAGG--VNDYTTALHMMRTG-AVGIIV 238 (393)
T ss_dssp ---CHHHHHHHCS--SCEEEEC--CCSHHHHHHHHTTT-CSEEEE
T ss_pred cHHHHHHHHHhcC--CCEEECC--cCCHHHHHHHHHcC-CCEEEE
Confidence 4556788888887 8885533 34689998888754 788888
No 241
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=27.41 E-value=1.4e+02 Score=26.25 Aligned_cols=108 Identities=12% Similarity=0.122 Sum_probs=59.6
Q ss_pred HHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEe----c----ccccc-CHHHHHHHHhcCCCCEEEec
Q 013317 283 GLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVG----D----DLLVT-NPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 283 ~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~g----d----e~~~~-~~~~~~~~i~~~a~d~v~ik 353 (445)
++.++ .+.+.+.+..+|+= +..+..+.+++.++ +|+++ | ..+++ ..+++..+++.+ +|.|.+.
T Consensus 37 ~~~~~-a~~~~~~G~~~i~~----~~~~~i~~i~~~~~--~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~G-ad~V~l~ 108 (234)
T 1yxy_A 37 IMPLM-AKAAQEAGAVGIRA----NSVRDIKEIQAITD--LPIIGIIKKDYPPQEPFITATMTEVDQLAALN-IAVIAMD 108 (234)
T ss_dssp SHHHH-HHHHHHHTCSEEEE----ESHHHHHHHHTTCC--SCEEEECBCCCTTSCCCBSCSHHHHHHHHTTT-CSEEEEE
T ss_pred hHHHH-HHHHHHCCCcEeec----CCHHHHHHHHHhCC--CCEEeeEcCCCCccccccCChHHHHHHHHHcC-CCEEEEc
Confidence 44444 33455667777752 24567888888877 88753 1 12222 345666666554 6888887
Q ss_pred cCccccH--HHHHHHHHHHHHc--CCcEEecCCCCCChhHHHHHHHhhhcCCcc
Q 013317 354 VNQIGSV--TESIEAVKMAKRA--GWGVMASHRSGETEDTFIADLSVGLATGQI 403 (445)
Q Consensus 354 ~~k~GGi--t~a~~i~~~A~~~--g~~~~~~~~~~et~~~~~~~la~a~~~~~~ 403 (445)
....+.. ....++++.+++. ++.++++.. +... +..+...++.++
T Consensus 109 ~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~---t~~e--a~~a~~~Gad~i 157 (234)
T 1yxy_A 109 CTKRDRHDGLDIASFIRQVKEKYPNQLLMADIS---TFDE--GLVAHQAGIDFV 157 (234)
T ss_dssp CCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECS---SHHH--HHHHHHTTCSEE
T ss_pred ccccCCCCCccHHHHHHHHHHhCCCCeEEEeCC---CHHH--HHHHHHcCCCEE
Confidence 6644321 1234556666655 777655442 2122 333444566776
No 242
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=27.03 E-value=3e+02 Score=27.46 Aligned_cols=101 Identities=13% Similarity=0.237 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCCeeEEECC---
Q 013317 227 EGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDP--- 303 (445)
Q Consensus 227 ~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~i~~iEdP--- 303 (445)
+.++.+.+..++.| +..++|+| |.+|+.+. .+ + ..++.-+.-.
T Consensus 144 ~~l~~l~~~a~~lg----m~~LvEvh---------------------------~~eE~~~A-~~-l-ga~iIGinnr~L~ 189 (452)
T 1pii_A 144 DQYRQLAAVAHSLE----MGVLTEVS---------------------------NEEEQERA-IA-L-GAKVVGINNRDLR 189 (452)
T ss_dssp HHHHHHHHHHHHTT----CEEEEEEC---------------------------SHHHHHHH-HH-T-TCSEEEEESEETT
T ss_pred HHHHHHHHHHHHcC----CeEEEEeC---------------------------CHHHHHHH-HH-C-CCCEEEEeCCCCC
Confidence 34554545565555 67889996 34565432 22 1 3456666643
Q ss_pred -CCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec--cCccccHHHHHH
Q 013317 304 -FDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK--VNQIGSVTESIE 365 (445)
Q Consensus 304 -~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik--~~k~GGit~a~~ 365 (445)
+ .-|++...+|...++..++++.+- -++++++++++.+. +|++.+= +++..-++.+++
T Consensus 190 t~-~~dl~~~~~L~~~ip~~~~vIaEs-GI~t~edv~~~~~~--a~avLVGealmr~~d~~~~~~ 250 (452)
T 1pii_A 190 DL-SIDLNRTRELAPKLGHNVTVISES-GINTYAQVRELSHF--ANGFLIGSALMAHDDLHAAVR 250 (452)
T ss_dssp TT-EECTHHHHHHHHHHCTTSEEEEES-CCCCHHHHHHHTTT--CSEEEECHHHHTCSCHHHHHH
T ss_pred CC-CCCHHHHHHHHHhCCCCCeEEEEC-CCCCHHHHHHHHHh--CCEEEEcHHHcCCcCHHHHHH
Confidence 2 347888999999986667877664 46889999999876 8999875 445544555444
No 243
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=26.76 E-value=2.1e+02 Score=26.52 Aligned_cols=94 Identities=18% Similarity=0.120 Sum_probs=54.8
Q ss_pred HHHHHHHHHhh-hcCCeeEEECCCCccCHHHHHHHHHHhCCc-eEEEeccccccCHHHHHHHHhcCCCCEEEeccCc-cc
Q 013317 282 DGLKNVYRSFI-SDHPIVSIEDPFDQDDWEHYAELTGKIGRH-VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-IG 358 (445)
Q Consensus 282 ~~~i~~~~~~~-~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~-~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k-~G 358 (445)
.+++....+.+ ++-+-..+++|.... +....+..+.+ +++-.++. -+++++++.++.+..=++...++. .|
T Consensus 91 ~~a~~~~~~~~~~~gd~vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~~~~~v~i~~p~nptG 164 (377)
T 3fdb_A 91 VRGLYIAIDHFTPAQSKVIVPTPAYPP----FFHLLSATQREGIFIDATGG--INLHDVEKGFQAGARSILLCNPYNPLG 164 (377)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEESCCTH----HHHHHHHHTCCEEEEECTTS--CCHHHHHHHHHTTCCEEEEESSBTTTT
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHh----HHHHHHHcCCEEEEccCCCC--CCHHHHHHHhccCCCEEEEeCCCCCCC
Confidence 45554444333 344566788887643 33333333321 23323322 358999998887644344444433 33
Q ss_pred cH---HHHHHHHHHHHHcCCcEEecC
Q 013317 359 SV---TESIEAVKMAKRAGWGVMASH 381 (445)
Q Consensus 359 Gi---t~a~~i~~~A~~~g~~~~~~~ 381 (445)
.+ .+..+++++|+++|+.+++..
T Consensus 165 ~~~~~~~l~~l~~~~~~~~~~li~De 190 (377)
T 3fdb_A 165 MVFAPEWLNELCDLAHRYDARVLVDE 190 (377)
T ss_dssp BCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 33 378999999999999987654
No 244
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=26.34 E-value=75 Score=27.87 Aligned_cols=42 Identities=7% Similarity=0.294 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
+++.++++++.++ +||+++-- +++++++.++++.+ +|++.+=
T Consensus 163 ~~~~~~~~~~~~~--ipvia~GG-I~~~~~~~~~~~~G-ad~v~vG 204 (223)
T 1y0e_A 163 DFQFLKDVLQSVD--AKVIAEGN-VITPDMYKRVMDLG-VHCSVVG 204 (223)
T ss_dssp HHHHHHHHHHHCC--SEEEEESS-CCSHHHHHHHHHTT-CSEEEEC
T ss_pred cHHHHHHHHhhCC--CCEEEecC-CCCHHHHHHHHHcC-CCEEEEC
Confidence 4667888888877 99877654 56799999999987 7888763
No 245
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=26.27 E-value=77 Score=28.31 Aligned_cols=42 Identities=10% Similarity=0.192 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhc-----CCCCEEEe
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKE-----KTCNALLL 352 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~-----~a~d~v~i 352 (445)
|++.+++|++.++ +||++.=- ++++++++++.+. +.+|.+.+
T Consensus 176 ~~~~i~~l~~~~~--iPvia~GG-I~~~~d~~~~~~~~~~~~G~adgv~v 222 (241)
T 1qo2_A 176 DFSLTKKIAIEAE--VKVLAAGG-ISSENSLKTAQKVHTETNGLLKGVIV 222 (241)
T ss_dssp CHHHHHHHHHHHT--CEEEEESS-CCSHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred CHHHHHHHHHhcC--CcEEEECC-CCCHHHHHHHHhcccccCCeEeEEEe
Confidence 7999999999998 88854432 5679999999887 42677665
No 246
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=26.12 E-value=4.5e+02 Score=25.31 Aligned_cols=123 Identities=11% Similarity=0.032 Sum_probs=75.2
Q ss_pred CCcChHHHHHHHHHhhhcCCeeEEECCCCc---cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec
Q 013317 277 QKVSGDGLKNVYRSFISDHPIVSIEDPFDQ---DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 277 ~~~t~~~~i~~~~~~~~~~~i~~iEdP~~~---~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
..++.++.++++ +.+++.++.+||=-+|. .+.+..+.+++.. .+.++++=- ..++.+++++++.+ ++.+.+=
T Consensus 20 ~~~~~~~k~~ia-~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~-~~~~v~~~~--r~~~~di~~a~~~g-~~~v~i~ 94 (382)
T 2ztj_A 20 ANFSTQDKVEIA-KALDEFGIEYIEVTTPVASPQSRKDAEVLASLG-LKAKVVTHI--QCRLDAAKVAVETG-VQGIDLL 94 (382)
T ss_dssp CCCCHHHHHHHH-HHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSC-CSSEEEEEE--ESCHHHHHHHHHTT-CSEEEEE
T ss_pred CCcCHHHHHHHH-HHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcC-CCcEEEEEc--ccChhhHHHHHHcC-CCEEEEE
Confidence 357889998874 56788999999986653 4556666666542 236664421 22478888888764 4666542
Q ss_pred cC------------ccccHHHHHHHHHHHHHcC--CcEEecCCC-CCChhHHHHH---HHhhhcCCcccc
Q 013317 354 VN------------QIGSVTESIEAVKMAKRAG--WGVMASHRS-GETEDTFIAD---LSVGLATGQIKT 405 (445)
Q Consensus 354 ~~------------k~GGit~a~~i~~~A~~~g--~~~~~~~~~-~et~~~~~~~---la~a~~~~~~~~ 405 (445)
.+ +-.-+..+.+++++|+++| +.+.++... ..+.....+. .+... +..+.+
T Consensus 95 ~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l 163 (382)
T 2ztj_A 95 FGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGL 163 (382)
T ss_dssp ECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEE
T ss_pred eccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEe
Confidence 21 1112455788899999999 888766532 2333344333 34444 555554
No 247
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=25.45 E-value=2e+02 Score=29.33 Aligned_cols=125 Identities=14% Similarity=0.166 Sum_probs=74.5
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC--ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec--
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD--QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK-- 353 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~--~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik-- 353 (445)
.+|..+.-+. .++.-+.++.||=-||- ++|....+++-...+.+++|++-=......+.+...++ ++|++.+-
T Consensus 213 ~lTekD~~dl-~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~--~sDGIMVARG 289 (520)
T 3khd_A 213 IISEKDKNDI-LNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILA--ESDGIMIARG 289 (520)
T ss_dssp SSCHHHHHHH-HHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHH--HSSCEEECHH
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHH--hCCcEEEccc
Confidence 4566665443 12334567888888885 45666666655544445777553111112333444454 36999873
Q ss_pred -cCcccc----HHHHHHHHHHHHHcCCcEEecCCCCCChh-------HHHHHHHhhh--cCCcccc
Q 013317 354 -VNQIGS----VTESIEAVKMAKRAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKT 405 (445)
Q Consensus 354 -~~k~GG----it~a~~i~~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~ 405 (445)
++--=+ ..--++++..|+++|.++++...+.||.. +=..|+|-|. ++..+.+
T Consensus 290 DLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavML 355 (520)
T 3khd_A 290 DLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVML 355 (520)
T ss_dssp HHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEE
T ss_pred cccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEe
Confidence 321112 23347788999999999998888888743 2355776664 7777665
No 248
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=25.42 E-value=1.4e+02 Score=28.99 Aligned_cols=94 Identities=13% Similarity=0.238 Sum_probs=61.9
Q ss_pred HHHHHHHHhhhcCCeeEEECCCCccCHHHHHHH-HHHhCCceEE-EeccccccCHHHHHHHHhcCCCCEEEecc--Cccc
Q 013317 283 GLKNVYRSFISDHPIVSIEDPFDQDDWEHYAEL-TGKIGRHVQI-VGDDLLVTNPKRVEKAIKEKTCNALLLKV--NQIG 358 (445)
Q Consensus 283 ~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L-~~~~~~~~pI-~gde~~~~~~~~~~~~i~~~a~d~v~ik~--~k~G 358 (445)
+++..+..++.+-+-..+.+|.....+..+..+ .+..+ +.+ .-| . .+++++++.++.+ ..+|.+.. +-.|
T Consensus 93 ~Ai~~~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g--~~~~~v~-~--~d~~~l~~~i~~~-~~~v~~e~~~np~G 166 (400)
T 3nmy_A 93 AATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAG--LDFSFVD-L--TDPAAFKAAIRAD-TKMVWIETPTNPML 166 (400)
T ss_dssp HHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHC--CEEEEEC-T--TSHHHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred HHHHHHHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcC--eEEEEEC-C--CCHHHHHHHhccC-CCEEEEECCCCCCC
Confidence 444444445555556778899877666666665 55566 443 222 1 3578888887643 34555543 3457
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCC
Q 013317 359 SVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 359 Git~a~~i~~~A~~~g~~~~~~~~ 382 (445)
.+.+..+++++|+++|+.+++...
T Consensus 167 ~~~~l~~i~~la~~~g~~livDe~ 190 (400)
T 3nmy_A 167 KLVDIAAIAVIARKHGLLTVVDNT 190 (400)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECT
T ss_pred eeecHHHHHHHHHHcCCEEEEECC
Confidence 788999999999999999877653
No 249
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=25.38 E-value=1.6e+02 Score=27.51 Aligned_cols=65 Identities=6% Similarity=0.091 Sum_probs=47.9
Q ss_pred HHHHHHhCCceEE--EeccccccCHHHHHHHHhcCCCCEEEeccCccc---cHHHHHHHHHHHHHcCCcE--EecCC
Q 013317 313 AELTGKIGRHVQI--VGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG---SVTESIEAVKMAKRAGWGV--MASHR 382 (445)
Q Consensus 313 ~~L~~~~~~~~pI--~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~G---Git~a~~i~~~A~~~g~~~--~~~~~ 382 (445)
..+.++.+ +|| =.|. ..+.+.+++.++.+ .+.+++|.+..- =|..+++++++|++.|+.+ -+|+-
T Consensus 67 ~~~a~~~~--VPValHlDH--g~~~e~i~~ai~~G-FtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~v 138 (286)
T 1gvf_A 67 SAYSTTYN--MPLALHLDH--HESLDDIRRKVHAG-VRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRL 138 (286)
T ss_dssp HHHHHHTT--SCBEEEEEE--ECCHHHHHHHHHTT-CCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred HHHHHhCC--CcEEEEcCC--CCCHHHHHHHHHcC-CCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeec
Confidence 33444555 665 5664 45789999999987 799999998652 3667899999999999876 45553
No 250
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=25.05 E-value=3.7e+02 Score=25.09 Aligned_cols=123 Identities=8% Similarity=0.015 Sum_probs=72.2
Q ss_pred chHHHHHHHHHHHhcCCCcceEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhcCC--eeEEEC
Q 013317 225 SYEGFELLKTAIAKGGYIGKIVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHP--IVSIED 302 (445)
Q Consensus 225 ~~~~l~~v~~ai~~~G~~~~i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~~~--i~~iEd 302 (445)
.+|+.+.++.+++.++ +++.+.+-+. . +..+++++.+ ..++.+ -..+--
T Consensus 64 ~eEr~~v~~~~v~~~~--grvpViaGvg-------------------------~-~t~~ai~la~-~A~~~Gadavlv~~ 114 (316)
T 3e96_A 64 LEEAKEEVRRTVEYVH--GRALVVAGIG-------------------------Y-ATSTAIELGN-AAKAAGADAVMIHM 114 (316)
T ss_dssp HHHHHHHHHHHHHHHT--TSSEEEEEEC-------------------------S-SHHHHHHHHH-HHHHHTCSEEEECC
T ss_pred HHHHHHHHHHHHHHhC--CCCcEEEEeC-------------------------c-CHHHHHHHHH-HHHhcCCCEEEEcC
Confidence 4677777777776654 4666665552 1 3457777643 455544 333445
Q ss_pred CCC----ccC-HHHHHHHHHHhCCceEEEeccc-cccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCc
Q 013317 303 PFD----QDD-WEHYAELTGKIGRHVQIVGDDL-LVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWG 376 (445)
Q Consensus 303 P~~----~~D-~~~~~~L~~~~~~~~pI~gde~-~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~ 376 (445)
|.. ++. ++-|+.+.+.++ +||+.-+. .--+++-+.++. ..-+++-+|-+ +|-+....++.+.+...+..
T Consensus 115 P~y~~~s~~~l~~~f~~va~a~~--lPiilYn~g~~l~~~~~~~La--~~pnIvgiKds-sgd~~~~~~~~~~~~~~~f~ 189 (316)
T 3e96_A 115 PIHPYVTAGGVYAYFRDIIEALD--FPSLVYFKDPEISDRVLVDLA--PLQNLVGVKYA-INDLPRFAKVVRSIPEEHQI 189 (316)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHHT--SCEEEEECCTTSCTHHHHHHT--TCTTEEEEEEC-CCCHHHHHHHHTTSCGGGCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC--CCEEEEeCCCCCCHHHHHHHH--cCCCEEEEEeC-CCCHHHHHHHHHhcCCCCce
Confidence 642 222 356688888888 88866541 112467777776 45689999987 46676666555433222344
Q ss_pred -EEecC
Q 013317 377 -VMASH 381 (445)
Q Consensus 377 -~~~~~ 381 (445)
+..|.
T Consensus 190 ~v~~G~ 195 (316)
T 3e96_A 190 AWICGT 195 (316)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 55443
No 251
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=24.80 E-value=1.7e+02 Score=27.33 Aligned_cols=70 Identities=19% Similarity=0.211 Sum_probs=45.0
Q ss_pred HHHHHhcCCCCEEEeccCccc-----cHHHHHHHHHHHHHcCCcEEecCCCC-----CCh-hHHHHHHHhhhcCCccccC
Q 013317 338 VEKAIKEKTCNALLLKVNQIG-----SVTESIEAVKMAKRAGWGVMASHRSG-----ETE-DTFIADLSVGLATGQIKTG 406 (445)
Q Consensus 338 ~~~~i~~~a~d~v~ik~~k~G-----Git~a~~i~~~A~~~g~~~~~~~~~~-----et~-~~~~~~la~a~~~~~~~~G 406 (445)
++++++. .+|.|.+.+..-. .+.++.++.+.|+++|+++++-...+ +.. ....+++|..+++.++|..
T Consensus 131 ve~Av~~-GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 131 MDDAVRL-NSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp HHHHHHT-TCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHC-CCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 4444443 4577776654211 35567788889999999988732111 112 2457889999999999987
Q ss_pred CC
Q 013317 407 AP 408 (445)
Q Consensus 407 ~~ 408 (445)
.+
T Consensus 210 ~t 211 (295)
T 3glc_A 210 YV 211 (295)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 252
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=24.69 E-value=82 Score=27.89 Aligned_cols=42 Identities=2% Similarity=0.073 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
.++..+++++.++ +||++.-. +.++++++++++.+ +|.+.+-
T Consensus 65 ~~~~i~~i~~~~~--ipvi~~g~-i~~~~~~~~~~~~G-ad~V~i~ 106 (253)
T 1h5y_A 65 FIDSVKRVAEAVS--IPVLVGGG-VRSLEDATTLFRAG-ADKVSVN 106 (253)
T ss_dssp HHHHHHHHHHHCS--SCEEEESS-CCSHHHHHHHHHHT-CSEEEES
T ss_pred cHHHHHHHHHhcC--CCEEEECC-CCCHHHHHHHHHcC-CCEEEEC
Confidence 3556678888877 88865543 46799999998877 8888865
No 253
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=24.18 E-value=1e+02 Score=28.50 Aligned_cols=60 Identities=13% Similarity=0.186 Sum_probs=43.0
Q ss_pred HHhhhcCCeeEEECCCCc--------cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec
Q 013317 289 RSFISDHPIVSIEDPFDQ--------DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 289 ~~~~~~~~i~~iEdP~~~--------~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
.+.+++.+...++ |+.. -|++-.+.+++..+ +||+.|=- +.+++++..+++.+ +|.|.+-
T Consensus 149 akrl~~~G~~aVm-Plg~pIGsG~Gi~~~~lI~~I~e~~~--vPVI~eGG-I~TPsDAa~AmeLG-AdgVlVg 216 (265)
T 1wv2_A 149 ARQLAEIGCIAVM-PLAGLIGSGLGICNPYNLRIILEEAK--VPVLVDAG-VGTASDAAIAMELG-CEAVLMN 216 (265)
T ss_dssp HHHHHHSCCSEEE-ECSSSTTCCCCCSCHHHHHHHHHHCS--SCBEEESC-CCSHHHHHHHHHHT-CSEEEES
T ss_pred HHHHHHhCCCEEE-eCCccCCCCCCcCCHHHHHHHHhcCC--CCEEEeCC-CCCHHHHHHHHHcC-CCEEEEC
Confidence 3446677777774 4332 47889999999877 88866544 57799999999985 5666654
No 254
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=24.10 E-value=2.6e+02 Score=24.40 Aligned_cols=69 Identities=7% Similarity=0.014 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC--ccccHHHHHHHHHHHHHcCCcEEecCC
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN--QIGSVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~--k~GGit~a~~i~~~A~~~g~~~~~~~~ 382 (445)
-++..++|++.++ .|+..+ ++++++.+.-+.+..-.+|++++... .. .+..+.++.++++|+.+.+...
T Consensus 56 ~~~~i~~l~~~~~--~~~~v~-l~vnd~~~~v~~~~~~Gad~v~vh~~~~~~---~~~~~~~~~~~~~g~~ig~~~~ 126 (230)
T 1rpx_A 56 GPLVVDSLRPITD--LPLDVH-LMIVEPDQRVPDFIKAGADIVSVHCEQSST---IHLHRTINQIKSLGAKAGVVLN 126 (230)
T ss_dssp CHHHHHHHGGGCC--SCEEEE-EESSSHHHHHHHHHHTTCSEEEEECSTTTC---SCHHHHHHHHHHTTSEEEEEEC
T ss_pred CHHHHHHHHhccC--CcEEEE-EEecCHHHHHHHHHHcCCCEEEEEecCccc---hhHHHHHHHHHHcCCcEEEEeC
Confidence 3677778887764 555444 34566654444334456899988776 33 2345667777788887766653
No 255
>2i9x_A Putative septation protein spovg; APC86317.1, staphylococcus epidermidis ATCC 12228, ST genomics, PSI-2, protein structure initiative; 1.80A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=23.79 E-value=91 Score=23.66 Aligned_cols=27 Identities=22% Similarity=0.449 Sum_probs=17.9
Q ss_pred cceeEEEEEEEecCCCCCeEEEEEEeCC
Q 013317 2 VTINAVKARQIFDSRGNPTVEVDVSLSD 29 (445)
Q Consensus 2 ~~I~~v~~~~i~~~~g~~~v~V~V~td~ 29 (445)
|+||+|+.+.+. ..|+---++.|+.|+
T Consensus 4 m~iTdVri~~~~-~~g~lka~asVt~dd 30 (87)
T 2i9x_A 4 MKVTDVRLRKIQ-TDGRMKALVSITLDE 30 (87)
T ss_dssp CCEEEEEEEECC-SSSSEEEEEEEEETT
T ss_pred cEEEEEEEEEcC-CCCCEEEEEEEEECC
Confidence 699999999994 334333455555554
No 256
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=23.68 E-value=84 Score=27.81 Aligned_cols=66 Identities=14% Similarity=0.089 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcE
Q 013317 308 DWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGV 377 (445)
Q Consensus 308 D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~ 377 (445)
+++.++++++.++ +||+++=- +++++++.++++.+ +|.+.+=-.-..+-....++.++.+++|+.+
T Consensus 186 ~~~~i~~l~~~~~--~pvia~GG-i~~~~~~~~~~~~G-a~~v~vgsal~~~~~~~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 186 DVELIRRVADSVR--IPVIASGG-AGRVEHFYEAAAAG-ADAVLAASLFHFRVLSIAQVKRYLKERGVEV 251 (253)
T ss_dssp CHHHHHHHHHHCS--SCEEEESC-CCSHHHHHHHHHTT-CSEEEESHHHHTTSSCHHHHHHHHHHTTCBC
T ss_pred CHHHHHHHHHhcC--CCEEEeCC-CCCHHHHHHHHHcC-CcHHHHHHHHHcCCCCHHHHHHHHHHcCCCC
Confidence 6888999998876 88755433 46689999998654 6666653211111112345555667777763
No 257
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=23.65 E-value=2.5e+02 Score=28.59 Aligned_cols=126 Identities=9% Similarity=0.099 Sum_probs=77.6
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC--ccCHHHHHHHHHHhC-------CceEEEeccccccCHHHHHHHHhcCCCC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD--QDDWEHYAELTGKIG-------RHVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~--~~D~~~~~~L~~~~~-------~~~pI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
.+|..+-.+. .++.-+.++.||=-.|- ++|....+++-...+ .+++|++-=........+...++ ++|
T Consensus 212 ~lTekD~~D~-l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~--~sD 288 (526)
T 4drs_A 212 IIGDKDRHDI-VDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICS--ESD 288 (526)
T ss_dssp SSCHHHHHHH-HHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHH--HSS
T ss_pred cccchhHHHH-HHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHh--hcc
Confidence 4566554443 23444678888888884 466666666655432 24777665221122233334443 689
Q ss_pred EEEeccCcccc-------HHHHHHHHHHHHHcCCcEEecCCCCCChh-------HHHHHHHhhh--cCCccccC
Q 013317 349 ALLLKVNQIGS-------VTESIEAVKMAKRAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKTG 406 (445)
Q Consensus 349 ~v~ik~~k~GG-------it~a~~i~~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~G 406 (445)
+|++.=+..|- ..--+++++.|+++|.++++...+.||.. +=..|+|-|. ++..+.+.
T Consensus 289 gIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLS 362 (526)
T 4drs_A 289 GIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLS 362 (526)
T ss_dssp EEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEES
T ss_pred EEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEc
Confidence 99985443321 22337899999999999999998888643 2355776664 77776653
No 258
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=23.63 E-value=3.2e+02 Score=26.33 Aligned_cols=41 Identities=10% Similarity=0.048 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEec
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
++..++|++..+ .+||+... +.++++++.+++.+ +|+|.+-
T Consensus 129 ~e~I~~ir~~~~-~~~Vi~G~--V~T~e~A~~a~~aG-aD~I~Vg 169 (361)
T 3r2g_A 129 GKTLKSLRQLLG-SRCIMAGN--VATYAGADYLASCG-ADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHT-TCEEEEEE--ECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHhcC-CCeEEEcC--cCCHHHHHHHHHcC-CCEEEEc
Confidence 456788888873 38887754 34689998888765 6888874
No 259
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=22.56 E-value=4.1e+02 Score=25.35 Aligned_cols=72 Identities=14% Similarity=0.200 Sum_probs=46.4
Q ss_pred HHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHH-------HHHHHHHHHHcCCcEEecCCC
Q 013317 311 HYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTE-------SIEAVKMAKRAGWGVMASHRS 383 (445)
Q Consensus 311 ~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~-------a~~i~~~A~~~g~~~~~~~~~ 383 (445)
.+.+|++ .+ +.|+.|+. -+....+.. +..-..|.+-||-+-+-++.. ...++.+|+..|+.++.-+
T Consensus 281 ~l~~l~~-~G--~~ialDDf-G~g~ssl~~-L~~l~~d~iKiD~~~v~~~~~~~~~~~~v~~i~~~a~~l~~~vvaEG-- 353 (400)
T 3sy8_A 281 NLVRLWI-MG--CGLAMDDF-GAGYSSLDR-LCEFPFSQIKLDRTFVQKMKTQPRSCAVISSVVALAQALGISLVVEG-- 353 (400)
T ss_dssp HHHHHHH-HT--CEEEEEEE-CSCSGGGGS-SSSCCCSEEEECTHHHHHHHHCTTHHHHHHHHHHHHHHHTCEEEECC--
T ss_pred HHHHHHH-CC--CEEEEECC-CCchhhHHH-HHhCCCCEEEECHHHHhhhhcChhHHHHHHHHHHHHHHcCCeEEEec--
Confidence 4455554 36 89999985 344333433 334468999999765544432 5668899999999986554
Q ss_pred CCChhH
Q 013317 384 GETEDT 389 (445)
Q Consensus 384 ~et~~~ 389 (445)
.||...
T Consensus 354 VEt~~~ 359 (400)
T 3sy8_A 354 VESDEQ 359 (400)
T ss_dssp CCCHHH
T ss_pred CCcHHH
Confidence 577544
No 260
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=22.46 E-value=84 Score=31.39 Aligned_cols=45 Identities=9% Similarity=0.062 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
++..+++++.++.++||+|.-- +.+.+++.+.+..+ +|.|++=-.
T Consensus 360 l~~i~~v~~~v~~~iPVIg~GG-I~s~~DA~e~l~aG-Ad~Vqigra 404 (443)
T 1tv5_A 360 TKFICEMYNYTNKQIPIIASGG-IFSGLDALEKIEAG-ASVCQLYSC 404 (443)
T ss_dssp HHHHHHHHHHTTTCSCEEEESS-CCSHHHHHHHHHTT-EEEEEESHH
T ss_pred HHHHHHHHHHcCCCCcEEEECC-CCCHHHHHHHHHcC-CCEEEEcHH
Confidence 4567788888843499866655 57799999999988 899998644
No 261
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=22.27 E-value=2.1e+02 Score=29.02 Aligned_cols=124 Identities=14% Similarity=0.188 Sum_probs=73.4
Q ss_pred CcChHHHHHHHHHhhhcCCeeEEECCCC--ccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC
Q 013317 278 KVSGDGLKNVYRSFISDHPIVSIEDPFD--QDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 278 ~~t~~~~i~~~~~~~~~~~i~~iEdP~~--~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
.+|..+.-+. . +.-+.++.||=-||- ++|....+++-...+.+++|++-=......+.+...++. +|++.+--+
T Consensus 189 ~ltekD~~dl-~-~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~--sDgImVaRG 264 (499)
T 3hqn_D 189 AVSAKDRVDL-Q-FGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEE--SDGIMVARG 264 (499)
T ss_dssp SSCHHHHHHH-H-HHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHH--SSEEEEEHH
T ss_pred CCCHHHHHHH-H-HHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHh--CCcEEEccc
Confidence 3566665543 2 334577888988985 456655555554333347765531111223334445543 799997543
Q ss_pred ccc---cH----HHHHHHHHHHHHcCCcEEecCCCCCChh-------HHHHHHHhhh--cCCcccc
Q 013317 356 QIG---SV----TESIEAVKMAKRAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKT 405 (445)
Q Consensus 356 k~G---Gi----t~a~~i~~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~ 405 (445)
-.| |. .--++++..|+++|.++++...+.||.. +=..|+|-|. ++..+.+
T Consensus 265 DLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavML 330 (499)
T 3hqn_D 265 DLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVML 330 (499)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEE
T ss_pred cccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEE
Confidence 322 22 2236788899999999998887777743 2245665443 7776654
No 262
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=22.07 E-value=3.7e+02 Score=25.32 Aligned_cols=85 Identities=14% Similarity=0.134 Sum_probs=56.0
Q ss_pred HHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCc--cccHHHHHHH
Q 013317 289 RSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ--IGSVTESIEA 366 (445)
Q Consensus 289 ~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k--~GGit~a~~i 366 (445)
..++.+-+...+++|..+.-..++ ...+ ..+..-.. .+++++++.++.....++.+...+ .|.+.+..++
T Consensus 137 ~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g--~~~~~~~~--~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l 208 (409)
T 3kki_A 137 QTICQPNTNVYIDFFAHMSLWEGA----RYAN--AQAHPFMH--NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAEL 208 (409)
T ss_dssp HHHCCTTCEEEEETTSCHHHHHHH----HHTT--CEEEEECT--TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHH
T ss_pred HHhcCCCCEEEECCCcCHHHHHHH----HHcC--CeEEEecC--CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHH
Confidence 334456668889999865433322 2333 33322221 358889988876545677776544 5778889999
Q ss_pred HHHHHHcCCcEEecC
Q 013317 367 VKMAKRAGWGVMASH 381 (445)
Q Consensus 367 ~~~A~~~g~~~~~~~ 381 (445)
+++|+++|+.+++..
T Consensus 209 ~~la~~~~~~li~De 223 (409)
T 3kki_A 209 VNISKEFGCALLVDE 223 (409)
T ss_dssp HHHHHHHTCEEEEEC
T ss_pred HHHHHHcCCEEEEEC
Confidence 999999999987654
No 263
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=22.07 E-value=3.5e+02 Score=26.95 Aligned_cols=34 Identities=21% Similarity=0.045 Sum_probs=20.7
Q ss_pred hhhcCCccccCCCCCchhHHHHHHHHHHHHHhCC
Q 013317 396 VGLATGQIKTGAPCRSERLAKYNQLLRIEEELGP 429 (445)
Q Consensus 396 ~a~~~~~~~~G~~~~~er~~k~n~ll~i~~~l~~ 429 (445)
+..+...+++|.=....-...+--|-.||++|-.
T Consensus 279 V~~GiaklNVgp~Lt~a~reAl~aL~~ie~~l~~ 312 (450)
T 3txv_A 279 VADGFAILKVGPGLTFALREALYGLDQIAAFLFP 312 (450)
T ss_dssp HHTTEEEEEECHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHcCCcEEEEChHHHHHHHHHHHHHHHHHHHHcc
Confidence 4445556777543333344555668999999953
No 264
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=22.02 E-value=4.6e+02 Score=23.95 Aligned_cols=117 Identities=15% Similarity=0.122 Sum_probs=65.7
Q ss_pred ChHHHHHHHHHhhhcCCeeEEE------CCCCccC-------------------HHHHHHHHHH-hCCceEE--Eeccc-
Q 013317 280 SGDGLKNVYRSFISDHPIVSIE------DPFDQDD-------------------WEHYAELTGK-IGRHVQI--VGDDL- 330 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iE------dP~~~~D-------------------~~~~~~L~~~-~~~~~pI--~gde~- 330 (445)
+.+...+.+.. +++.+..+|| ||+...- ++..+++|+. .. +|| ++.-.
T Consensus 30 ~~~~~~~~~~~-l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~--~Pivlm~Y~np 106 (267)
T 3vnd_A 30 SPELSLKIIQT-LVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPD--MPIGLLLYANL 106 (267)
T ss_dssp CHHHHHHHHHH-HHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--CCEEEEECHHH
T ss_pred CHHHHHHHHHH-HHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--CCEEEEecCcH
Confidence 45566666544 5667777776 4443210 3455667766 55 665 43311
Q ss_pred -cccCHHHHHH-HHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCChhHHHHHHHhhhcCCcccc
Q 013317 331 -LVTNPKRVEK-AIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 331 -~~~~~~~~~~-~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+....++|.+ +.+.+.--++.+|+.- .+..+..+.|+++|+..+.-. ...|....+..++-. ...|+..
T Consensus 107 v~~~g~e~f~~~~~~aGvdgvii~Dlp~----ee~~~~~~~~~~~gl~~i~li-aP~t~~eri~~i~~~-~~gfvY~ 177 (267)
T 3vnd_A 107 VFANGIDEFYTKAQAAGVDSVLIADVPV----EESAPFSKAAKAHGIAPIFIA-PPNADADTLKMVSEQ-GEGYTYL 177 (267)
T ss_dssp HHHHCHHHHHHHHHHHTCCEEEETTSCG----GGCHHHHHHHHHTTCEEECEE-CTTCCHHHHHHHHHH-CCSCEEE
T ss_pred HHHhhHHHHHHHHHHcCCCEEEeCCCCH----hhHHHHHHHHHHcCCeEEEEE-CCCCCHHHHHHHHHh-CCCcEEE
Confidence 1113355544 4445544447777763 578889999999999864333 234444444444333 4456665
No 265
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=21.92 E-value=4.8e+02 Score=24.98 Aligned_cols=94 Identities=13% Similarity=0.172 Sum_probs=56.9
Q ss_pred cCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC----ccccHHHHHHHHHHHHHc--CCcEEec
Q 013317 307 DDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN----QIGSVTESIEAVKMAKRA--GWGVMAS 380 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~----k~GGit~a~~i~~~A~~~--g~~~~~~ 380 (445)
-.++..++|++.++ +||+--+. .++++++.+.+.+ +|+|.+.-. .-+|...+.-+.++.++. .++++..
T Consensus 216 ~~~~~i~~lr~~~~--~PvivK~v--~~~e~a~~a~~~G-ad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~ 290 (368)
T 2nli_A 216 ISPRDIEEIAGHSG--LPVFVKGI--QHPEDADMAIKRG-ASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFD 290 (368)
T ss_dssp CCHHHHHHHHHHSS--SCEEEEEE--CSHHHHHHHHHTT-CSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEEC
T ss_pred hhHHHHHHHHHHcC--CCEEEEcC--CCHHHHHHHHHcC-CCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEE
Confidence 35778999999987 88865543 4688888887665 788887421 112344444444444444 5887655
Q ss_pred CCCCCChhHHHHHHHhhhcCCccccCCC
Q 013317 381 HRSGETEDTFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 381 ~~~~et~~~~~~~la~a~~~~~~~~G~~ 408 (445)
.. ..+.....--|+ +|+..+..|.+
T Consensus 291 GG-I~~g~D~~kala--lGAd~V~iGr~ 315 (368)
T 2nli_A 291 SG-VRRGEHVAKALA--SGADVVALGRP 315 (368)
T ss_dssp SS-CCSHHHHHHHHH--TTCSEEEECHH
T ss_pred CC-CCCHHHHHHHHH--cCCCEEEECHH
Confidence 43 344444334444 56777777653
No 266
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=21.79 E-value=1.8e+02 Score=28.28 Aligned_cols=100 Identities=11% Similarity=-0.032 Sum_probs=62.8
Q ss_pred hHHHHHHHHHhh-hcCC---eeEEECCCCccCHHHHHHHHHHhCCc-----eEEE-eccccccCHHHHHHHHhc--CCCC
Q 013317 281 GDGLKNVYRSFI-SDHP---IVSIEDPFDQDDWEHYAELTGKIGRH-----VQIV-GDDLLVTNPKRVEKAIKE--KTCN 348 (445)
Q Consensus 281 ~~~~i~~~~~~~-~~~~---i~~iEdP~~~~D~~~~~~L~~~~~~~-----~pI~-gde~~~~~~~~~~~~i~~--~a~d 348 (445)
..+++..+...+ ...+ -..+++|-.+.+...+..+.+..+-. +++. -++...-+++++++.++. ....
T Consensus 137 ~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~ 216 (465)
T 3e9k_A 137 LTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIA 216 (465)
T ss_dssp HHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeE
Confidence 345555443333 2222 37889999888877777666655422 1221 122222358999998863 2344
Q ss_pred EEEecc--CccccHHHHHHHHHHHHHcCCcEEec
Q 013317 349 ALLLKV--NQIGSVTESIEAVKMAKRAGWGVMAS 380 (445)
Q Consensus 349 ~v~ik~--~k~GGit~a~~i~~~A~~~g~~~~~~ 380 (445)
+|.+-. +-.|.+.+..++.++|+++|+.+++.
T Consensus 217 lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D 250 (465)
T 3e9k_A 217 VILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFD 250 (465)
T ss_dssp EEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCcccCcceeecHHHHHHHHHHcCCEEEEE
Confidence 444443 34688889999999999999998765
No 267
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=21.68 E-value=46 Score=33.04 Aligned_cols=45 Identities=9% Similarity=0.062 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccC
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
++..+++++.++.++||+|.-- +++.+|+.+++..+ +|.|++=-.
T Consensus 332 l~~I~~v~~~v~~~iPIIg~GG-I~s~eDa~e~l~aG-Ad~VqIgra 376 (415)
T 3i65_A 332 TKFICEMYNYTNKQIPIIASGG-IFSGLDALEKIEAG-ASVCQLYSC 376 (415)
T ss_dssp HHHHHHHHHHTTTCSCEEECSS-CCSHHHHHHHHHHT-EEEEEESHH
T ss_pred HHHHHHHHHHhCCCCCEEEECC-CCCHHHHHHHHHcC-CCEEEEcHH
Confidence 3567888888854599977766 57799999999987 599997654
No 268
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=21.68 E-value=1.7e+02 Score=27.29 Aligned_cols=83 Identities=12% Similarity=0.135 Sum_probs=52.3
Q ss_pred CCeeEEECCCCccCHHHHHHHHHHhCCc-eEEEeccccccCHHHHHHHHhc-CCCCEEEecc-CccccHHHHHHHHHHHH
Q 013317 295 HPIVSIEDPFDQDDWEHYAELTGKIGRH-VQIVGDDLLVTNPKRVEKAIKE-KTCNALLLKV-NQIGSVTESIEAVKMAK 371 (445)
Q Consensus 295 ~~i~~iEdP~~~~D~~~~~~L~~~~~~~-~pI~gde~~~~~~~~~~~~i~~-~a~d~v~ik~-~k~GGit~a~~i~~~A~ 371 (445)
-+...+.+|.... +....+..+.+ +++--|+...-+++++++.++. +..-++..-+ +-.|.+.+..++.++|+
T Consensus 123 gd~vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 198 (397)
T 3f9t_A 123 HPKIIVPITAHFS----FEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAK 198 (397)
T ss_dssp SCEEEEETTCCTH----HHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred CeEEEECCcchhH----HHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHH
Confidence 4577889997654 33333333421 2232233223368999998877 4433333333 45677888999999999
Q ss_pred HcCCcEEecC
Q 013317 372 RAGWGVMASH 381 (445)
Q Consensus 372 ~~g~~~~~~~ 381 (445)
++|+.+++..
T Consensus 199 ~~~~~li~De 208 (397)
T 3f9t_A 199 ENNIYIHVDA 208 (397)
T ss_dssp HHTCEEEEEC
T ss_pred HhCCeEEEEc
Confidence 9999987655
No 269
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=21.59 E-value=4.6e+02 Score=23.98 Aligned_cols=60 Identities=13% Similarity=0.105 Sum_probs=41.6
Q ss_pred HHHHHhCCceEEEeccccccCHHHHHHHHhc-CCCCEEE-eccCccccHHHHHHHHHHHHHcCCcEEecCC
Q 013317 314 ELTGKIGRHVQIVGDDLLVTNPKRVEKAIKE-KTCNALL-LKVNQIGSVTESIEAVKMAKRAGWGVMASHR 382 (445)
Q Consensus 314 ~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~-~a~d~v~-ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~ 382 (445)
.|++.++ +||+-|-. +++-++..++. +..+++| +. |+-...-+++.+|.++|.++++-|+
T Consensus 72 ~l~~~~~--~pisIDT~---~~~v~~aal~a~~Ga~iINdvs----~~~d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 72 TIQEVVD--LPCCLDST---NPDAIEAGLKVHRGHAMINSTS----ADQWKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp HHHHHCC--CCEEEECS---CHHHHHHHHHHCCSCCEEEEEC----SCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHhCC--CeEEEeCC---CHHHHHHHHHhCCCCCEEEECC----CCccccHHHHHHHHHcCCCEEEEec
Confidence 3344455 89988843 47878888876 1356666 43 2323356789999999999999996
No 270
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=21.28 E-value=1e+02 Score=29.29 Aligned_cols=49 Identities=12% Similarity=0.108 Sum_probs=37.7
Q ss_pred cCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecC
Q 013317 333 TNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASH 381 (445)
Q Consensus 333 ~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~ 381 (445)
.+++++++.++.....++.+-.+..|++.+..+++++|+++|+.+++..
T Consensus 156 ~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De 204 (420)
T 3gbx_A 156 IDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDM 204 (420)
T ss_dssp CCHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEEC
T ss_pred cCHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEEC
Confidence 4688888888765567777755556788889999999999999887654
No 271
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=21.21 E-value=2e+02 Score=30.66 Aligned_cols=93 Identities=15% Similarity=0.160 Sum_probs=64.1
Q ss_pred HHHHHH---HHhcCCCCEEEe---ccCccc---cHHH-------------HHHHHHHHHHcCCcEEecCCCCCC------
Q 013317 335 PKRVEK---AIKEKTCNALLL---KVNQIG---SVTE-------------SIEAVKMAKRAGWGVMASHRSGET------ 386 (445)
Q Consensus 335 ~~~~~~---~i~~~a~d~v~i---k~~k~G---Git~-------------a~~i~~~A~~~g~~~~~~~~~~et------ 386 (445)
.+..++ +..+...+++.+ |..+-+ .-.. +.+++++|++.|+.+++.|.+..+
T Consensus 370 te~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~t~~~~~n~e~ 449 (738)
T 2d73_A 370 TANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNYER 449 (738)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEECTTBHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEcCCCchhhHHH
Confidence 455554 455788999999 888753 2233 789999999999999988865542
Q ss_pred hhHHHHHHHhhhcCCccccCCC----CCch------hHHHHHHHHHHHHHh
Q 013317 387 EDTFIADLSVGLATGQIKTGAP----CRSE------RLAKYNQLLRIEEEL 427 (445)
Q Consensus 387 ~~~~~~~la~a~~~~~~~~G~~----~~~e------r~~k~n~ll~i~~~l 427 (445)
.......+-...|..-+|.|-. .+.+ .+..|-++++-+.+.
T Consensus 450 ~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~ 500 (738)
T 2d73_A 450 HMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAADY 500 (738)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHHHHHHHHHc
Confidence 1223445555678888998777 3443 666777777766665
No 272
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=21.12 E-value=1.2e+02 Score=28.69 Aligned_cols=47 Identities=11% Similarity=-0.010 Sum_probs=36.7
Q ss_pred HHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCC
Q 013317 335 PKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRS 383 (445)
Q Consensus 335 ~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~ 383 (445)
.+-+..+++.+ .+++.=|+.-. .+.++.++++.|++.|+.++++++.
T Consensus 108 ~~~a~~al~aG-khVl~EKPla~-~~~ea~~l~~~a~~~g~~l~vg~~~ 154 (393)
T 4fb5_A 108 AEMAIAALEAG-KHVWCEKPMAP-AYADAERMLATAERSGKVAALGYNY 154 (393)
T ss_dssp HHHHHHHHHTT-CEEEECSCSCS-SHHHHHHHHHHHHHSSSCEEECCGG
T ss_pred HHHHHHHHhcC-CeEEEccCCcc-cHHHHHHhhhhHHhcCCcccccccc
Confidence 45556666654 57777776554 7999999999999999999999953
No 273
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=20.99 E-value=2.3e+02 Score=24.44 Aligned_cols=67 Identities=15% Similarity=0.157 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecC
Q 013317 309 WEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASH 381 (445)
Q Consensus 309 ~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~ 381 (445)
++..++|++.++ .|+..+ +.++++.+.-+.+..-.+|.+++..... ....+.++.++++|..+++..
T Consensus 50 ~~~i~~i~~~~~--~~~~v~-l~v~d~~~~i~~~~~~gad~v~vh~~~~---~~~~~~~~~~~~~g~~i~~~~ 116 (220)
T 2fli_A 50 ADVVASMRKHSK--LVFDCH-LMVVDPERYVEAFAQAGADIMTIHTEST---RHIHGALQKIKAAGMKAGVVI 116 (220)
T ss_dssp HHHHHHHHTTCC--SEEEEE-EESSSGGGGHHHHHHHTCSEEEEEGGGC---SCHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHhCC--CCEEEE-EeecCHHHHHHHHHHcCCCEEEEccCcc---ccHHHHHHHHHHcCCcEEEEE
Confidence 778888888775 666554 3345544322433344689999987654 234456666777888877665
No 274
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=20.98 E-value=4.5e+02 Score=23.44 Aligned_cols=91 Identities=13% Similarity=0.048 Sum_probs=59.9
Q ss_pred ChHHHHHHHHHhhhcCCeeEEECCCCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCcc--
Q 013317 280 SGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI-- 357 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~-- 357 (445)
+.+++++...++.+-++=.+|-=|...+=+...++|.+. + +++-.- + +.++.+..-..+.+ ++++.|=++|+
T Consensus 65 d~e~mi~eA~~L~~~~~nv~IKIP~T~eGl~A~~~L~~~-G--I~vn~T-l-ifS~~QA~~Aa~AG-a~yISPfvgRi~d 138 (223)
T 3s1x_A 65 KYEGMVEEARKIHGLGDNAVVKIPMTEDGLRAIKTLSSE-H--INTNCT-L-VFNPIQALLAAKAG-VTYVSPFVGRLDD 138 (223)
T ss_dssp SHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHT-T--CCEEEE-E-ECSHHHHHHHHHTT-CSEEEEBSHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHC-C--CcEEEE-E-eCCHHHHHHHHHcC-CeEEEeecchHhh
Confidence 455566554444444555678778876555555555543 4 665333 2 23577777777776 78999987764
Q ss_pred ---ccHHHHHHHHHHHHHcCCc
Q 013317 358 ---GSVTESIEAVKMAKRAGWG 376 (445)
Q Consensus 358 ---GGit~a~~i~~~A~~~g~~ 376 (445)
-|+.-..++.++.+.+|.+
T Consensus 139 ~g~dG~~~v~~i~~~~~~~~~~ 160 (223)
T 3s1x_A 139 IGEDGMQIIDMIRTIFNNYIIK 160 (223)
T ss_dssp TTSCTHHHHHHHHHHHHHTTCC
T ss_pred cCCCHHHHHHHHHHHHHHcCCC
Confidence 4788899999999998754
No 275
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=20.57 E-value=5.8e+02 Score=24.65 Aligned_cols=113 Identities=14% Similarity=0.184 Sum_probs=64.1
Q ss_pred ChHHHHHHHHHhhhcCCeeEE-ECC------------CCccCHHHHHHHHHHhCCceEEEeccccccCHHHHHHHHhcCC
Q 013317 280 SGDGLKNVYRSFISDHPIVSI-EDP------------FDQDDWEHYAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKT 346 (445)
Q Consensus 280 t~~~~i~~~~~~~~~~~i~~i-EdP------------~~~~D~~~~~~L~~~~~~~~pI~gde~~~~~~~~~~~~i~~~a 346 (445)
+.+++.++ .+.+.+.+..++ =|. +..+.+..+++.+++++ +|++.+= .++..+..+.+ .
T Consensus 154 s~e~a~~~-a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G--l~~~te~---~d~~~~~~l~~--~ 225 (385)
T 3nvt_A 154 SYEQVAAV-AESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG--LGVISEI---VTPADIEVALD--Y 225 (385)
T ss_dssp CHHHHHHH-HHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEEC---CSGGGHHHHTT--T
T ss_pred CHHHHHHH-HHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC--CEEEEec---CCHHHHHHHHh--h
Confidence 56667665 444565664433 222 22333444555556778 9987763 24666766643 3
Q ss_pred CCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCCCCh--hHHHHHHHhhhcCCccc
Q 013317 347 CNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSGETE--DTFIADLSVGLATGQIK 404 (445)
Q Consensus 347 ~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~et~--~~~~~~la~a~~~~~~~ 404 (445)
+|+++|=-..+-- + .+.+.+...|.++.+...+.-+. .-.++......|++++.
T Consensus 226 vd~lkIgs~~~~n-~---~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~ 281 (385)
T 3nvt_A 226 VDVIQIGARNMQN-F---ELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKII 281 (385)
T ss_dssp CSEEEECGGGTTC-H---HHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEE
T ss_pred CCEEEECcccccC-H---HHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 8888876554432 2 44455667899999988653332 22344544444554433
No 276
>4eb5_C NIFU protein (NIFU-1); scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_C*
Probab=20.48 E-value=1e+02 Score=26.01 Aligned_cols=63 Identities=22% Similarity=0.171 Sum_probs=37.1
Q ss_pred HhHhhhccCCCCCCHHHH-HHHHHHhhccCCCccccccccc--cchhHHHHHHHHHHHHHHhcCCchHHHHH
Q 013317 72 SIIGPALVGKDPTEQTQI-DNFMVQQLDGTVNEWGWCKQKL--GANAILAVSLAVCKAGAMVKKIPLYQHIA 140 (445)
Q Consensus 72 ~~l~p~LiG~d~~~~~~i-~~~l~~~l~~~~~~~~~~~~~~--~~~A~sAvdiAlwD~~ak~~g~Pl~~lLG 140 (445)
..+...++|+...+..+| .+.+...+.+.+. ..+ ...+..|+.-|+-|...|..+.+-.+-+|
T Consensus 66 S~mtelv~GKtleEA~~i~~~~i~~~L~glpp------~Ri~CA~La~~AL~~Al~~y~~k~~~~~~~~~~~ 131 (153)
T 4eb5_C 66 SMATEMAKGKTIEEALKITRDAVAEALGGLPK------QKMHCSNLAADALRRAIVDYFRKNGKIDKIKELG 131 (153)
T ss_dssp HHHHHHHTTCBHHHHTTCCHHHHHHHHTCCCT------TSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTS
T ss_pred HHHHHHHcCCCHHHHHHhhHHHHHHHhcCCCc------chhHHHHHHHHHHHHHHHHHHHhcCCccHHHHhh
Confidence 346678888866555444 2222213333221 122 23566788889999888887777777666
No 277
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=20.18 E-value=3.7e+02 Score=24.82 Aligned_cols=114 Identities=14% Similarity=0.140 Sum_probs=64.3
Q ss_pred eEEEEeccccccccccCcceeecccCCCCCCCCCcChHHHHHHHHHhhhc-CCeeE--EEC--C----CC-ccCHHHHHH
Q 013317 245 IVIGMDVAASEFYDRKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISD-HPIVS--IED--P----FD-QDDWEHYAE 314 (445)
Q Consensus 245 i~l~vD~~a~~~~~~~~~~y~~~~~~~~~~~n~~~t~~~~i~~~~~~~~~-~~i~~--iEd--P----~~-~~D~~~~~~ 314 (445)
+.=-|++..+.||+.+ ...+.+++++...+++++ .++.= .|- | ++ .++++-...
T Consensus 8 imgilN~TpDSFsdgg----------------~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~p 71 (280)
T 1eye_A 8 VMGVLNVTDDSFSDGG----------------CYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIP 71 (280)
T ss_dssp EEEEEECSCCTTCSSC----------------CCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHH
T ss_pred EEEEEeCCCCCcCCCc----------------ccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHH
Confidence 3333677777777643 234677888776665553 22221 132 2 22 233443333
Q ss_pred HHHHh---CCceEEEeccccccCHHHHHHHHhcCCCCEEEeccCccccHHHHHHHHHHHHHcCCcEEecCCCC
Q 013317 315 LTGKI---GRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMAKRAGWGVMASHRSG 384 (445)
Q Consensus 315 L~~~~---~~~~pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~k~GGit~a~~i~~~A~~~g~~~~~~~~~~ 384 (445)
+-+.+ + +||+-|-. +++-++..++.++ ++|| +++ |+ ..--+++.++.++|+++++-|+.+
T Consensus 72 vi~~l~~~~--~piSIDT~---~~~va~aAl~aGa-~iIN-dvs--g~-~~d~~m~~~~a~~~~~vVlmh~~G 134 (280)
T 1eye_A 72 VVKELAAQG--ITVSIDTM---RADVARAALQNGA-QMVN-DVS--GG-RADPAMGPLLAEADVPWVLMHWRA 134 (280)
T ss_dssp HHHHHHHTT--CCEEEECS---CHHHHHHHHHTTC-CEEE-ETT--TT-SSCTTHHHHHHHHTCCEEEECCCC
T ss_pred HHHHhhcCC--CEEEEeCC---CHHHHHHHHHcCC-CEEE-ECC--CC-CCCHHHHHHHHHhCCeEEEEcCCC
Confidence 33333 5 99999943 4888888998854 6665 222 11 112267788899999999999743
Done!