Query 013318
Match_columns 445
No_of_seqs 158 out of 1673
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 02:38:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013318.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013318hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3098 Uncharacterized conser 100.0 1.9E-31 4.1E-36 262.6 33.5 394 23-436 4-438 (461)
2 PRK03545 putative arabinose tr 100.0 3.2E-26 7E-31 228.4 35.8 363 27-434 8-381 (390)
3 KOG3097 Predicted membrane pro 100.0 1.5E-28 3.3E-33 225.4 16.0 355 5-373 3-389 (390)
4 COG2814 AraJ Arabinose efflux 100.0 1.4E-25 3.1E-30 217.0 34.7 369 22-435 7-388 (394)
5 PRK09556 uhpT sugar phosphate 100.0 3.4E-26 7.5E-31 233.6 29.5 375 32-433 33-449 (467)
6 PRK11551 putative 3-hydroxyphe 100.0 2.6E-25 5.7E-30 222.8 34.1 372 27-434 11-397 (406)
7 TIGR02332 HpaX 4-hydroxyphenyl 99.9 4.5E-25 9.7E-30 221.7 33.1 373 26-421 6-409 (412)
8 PRK11663 regulatory protein Uh 99.9 1.2E-24 2.5E-29 220.3 33.5 370 33-430 28-421 (434)
9 PRK10406 alpha-ketoglutarate t 99.9 1.2E-24 2.6E-29 220.0 33.5 371 34-434 28-425 (432)
10 TIGR00890 2A0111 Oxalate/Forma 99.9 4.7E-25 1E-29 217.6 29.5 346 44-426 19-375 (377)
11 TIGR00897 2A0118 polyol permea 99.9 5E-24 1.1E-28 213.5 36.2 376 25-433 10-401 (402)
12 PRK09874 drug efflux system pr 99.9 7.2E-24 1.6E-28 212.3 35.9 377 18-439 7-404 (408)
13 PRK10642 proline/glycine betai 99.9 2.5E-24 5.4E-29 221.2 32.4 349 28-398 16-391 (490)
14 PLN00028 nitrate transmembrane 99.9 1.8E-24 3.9E-29 221.2 30.7 375 35-433 43-433 (476)
15 PRK09705 cynX putative cyanate 99.9 4.9E-24 1.1E-28 212.9 32.8 341 46-431 27-379 (393)
16 PRK09952 shikimate transporter 99.9 6.7E-24 1.5E-28 214.9 34.0 382 27-432 21-432 (438)
17 PRK10213 nepI ribonucleoside t 99.9 1.8E-23 3.9E-28 208.8 36.1 338 26-408 18-362 (394)
18 PRK03699 putative transporter; 99.9 1.3E-23 2.7E-28 210.0 35.0 358 28-427 7-374 (394)
19 PRK03633 putative MFS family t 99.9 9.5E-24 2.1E-28 209.9 32.6 354 25-427 3-366 (381)
20 COG2271 UhpC Sugar phosphate p 99.9 2.7E-24 5.8E-29 205.6 26.8 376 30-434 31-435 (448)
21 PRK12307 putative sialic acid 99.9 8.3E-24 1.8E-28 213.3 31.7 352 27-408 17-379 (426)
22 PRK10091 MFS transport protein 99.9 5E-23 1.1E-27 204.9 36.2 361 28-432 3-375 (382)
23 PRK11273 glpT sn-glycerol-3-ph 99.9 1.3E-23 2.8E-28 213.7 32.6 355 47-431 48-433 (452)
24 TIGR00710 efflux_Bcr_CflA drug 99.9 4.3E-23 9.4E-28 204.8 35.5 344 27-406 4-356 (385)
25 PRK10133 L-fucose transporter; 99.9 2.5E-23 5.3E-28 210.5 34.2 357 17-402 15-397 (438)
26 PRK15402 multidrug efflux syst 99.9 5.5E-23 1.2E-27 206.2 35.8 328 46-408 31-366 (406)
27 TIGR00893 2A0114 d-galactonate 99.9 6.3E-24 1.4E-28 210.4 27.7 366 39-430 5-396 (399)
28 PRK14995 methyl viologen resis 99.9 1.8E-23 3.8E-28 215.1 31.4 346 32-403 10-404 (495)
29 PRK05122 major facilitator sup 99.9 4.1E-23 8.9E-28 206.5 33.3 359 25-434 12-390 (399)
30 PRK12382 putative transporter; 99.9 6.3E-23 1.4E-27 204.7 34.4 363 19-432 6-388 (392)
31 TIGR00903 2A0129 major facilit 99.9 6.7E-23 1.5E-27 202.4 33.9 339 48-429 11-361 (368)
32 PRK11195 lysophospholipid tran 99.9 2.8E-22 6.2E-27 200.1 36.8 339 28-407 3-351 (393)
33 TIGR01299 synapt_SV2 synaptic 99.9 3.2E-23 7E-28 218.7 31.0 166 47-223 186-358 (742)
34 PRK11652 emrD multidrug resist 99.9 2.2E-22 4.8E-27 200.9 35.1 346 24-409 4-357 (394)
35 TIGR00891 2A0112 putative sial 99.9 6.2E-23 1.3E-27 204.9 30.3 358 25-409 9-387 (405)
36 TIGR00900 2A0121 H+ Antiporter 99.9 8.5E-23 1.8E-27 200.7 30.7 309 67-408 42-359 (365)
37 PRK10489 enterobactin exporter 99.9 1E-22 2.2E-27 205.0 31.8 325 67-430 60-397 (417)
38 PRK15034 nitrate/nitrite trans 99.9 4.4E-22 9.5E-27 199.1 35.9 326 26-382 32-376 (462)
39 TIGR00894 2A0114euk Na(+)-depe 99.9 4.4E-23 9.6E-28 210.6 27.9 350 58-432 71-449 (465)
40 PRK11043 putative transporter; 99.9 1E-21 2.2E-26 196.7 37.0 337 31-406 9-351 (401)
41 PF07690 MFS_1: Major Facilita 99.9 3.1E-23 6.6E-28 202.9 25.3 339 35-403 3-352 (352)
42 PRK15403 multidrug efflux syst 99.9 1.1E-21 2.3E-26 197.3 36.7 342 62-439 54-403 (413)
43 PRK11102 bicyclomycin/multidru 99.9 3E-22 6.5E-27 198.6 32.2 349 49-432 12-371 (377)
44 TIGR00892 2A0113 monocarboxyla 99.9 3.4E-22 7.4E-27 203.3 33.2 368 30-427 18-415 (455)
45 PRK10077 xylE D-xylose transpo 99.9 1.8E-22 3.8E-27 206.8 30.9 348 65-430 61-454 (479)
46 PRK10504 putative transporter; 99.9 1.6E-21 3.5E-26 199.4 37.3 355 25-406 7-409 (471)
47 PRK11646 multidrug resistance 99.9 9.9E-22 2.1E-26 196.7 34.6 334 30-408 13-355 (400)
48 PRK15075 citrate-proton sympor 99.9 2.8E-22 6E-27 202.9 30.6 346 30-403 17-385 (434)
49 TIGR00879 SP MFS transporter, 99.9 3.1E-23 6.6E-28 211.1 23.4 347 65-434 77-471 (481)
50 TIGR00711 efflux_EmrB drug res 99.9 3.4E-22 7.3E-27 204.9 31.2 350 31-406 5-404 (485)
51 TIGR00895 2A0115 benzoate tran 99.9 2.9E-22 6.3E-27 199.2 29.6 333 45-407 34-395 (398)
52 TIGR00886 2A0108 nitrite extru 99.9 2E-22 4.4E-27 198.8 27.9 354 28-398 1-365 (366)
53 TIGR00712 glpT glycerol-3-phos 99.9 7.1E-22 1.5E-26 200.2 30.2 359 49-435 48-435 (438)
54 PRK10054 putative transporter; 99.9 1.7E-21 3.8E-26 194.6 32.4 354 25-421 4-372 (395)
55 TIGR00881 2A0104 phosphoglycer 99.9 2.1E-22 4.6E-27 198.7 24.2 345 36-407 3-367 (379)
56 PRK10473 multidrug efflux syst 99.9 6.1E-21 1.3E-25 190.4 34.0 326 43-411 18-352 (392)
57 TIGR00899 2A0120 sugar efflux 99.9 1.1E-20 2.3E-25 187.0 33.4 351 38-431 7-372 (375)
58 PRK03893 putative sialic acid 99.9 6.8E-21 1.5E-25 196.0 33.0 368 26-421 18-441 (496)
59 PRK11010 ampG muropeptide tran 99.9 3.4E-20 7.5E-25 190.2 37.9 378 22-434 7-404 (491)
60 TIGR00887 2A0109 phosphate:H+ 99.9 2.7E-21 5.9E-26 199.3 29.0 352 65-431 62-487 (502)
61 TIGR00883 2A0106 metabolite-pr 99.9 1.9E-21 4.2E-26 192.9 26.1 308 73-407 49-370 (394)
62 PRK09528 lacY galactoside perm 99.9 7.7E-21 1.7E-25 191.5 30.0 375 27-433 9-403 (420)
63 cd06174 MFS The Major Facilita 99.9 5.4E-21 1.2E-25 186.4 27.8 335 33-430 4-349 (352)
64 KOG2533 Permease of the major 99.9 1.1E-21 2.3E-26 198.0 23.3 239 63-317 85-336 (495)
65 KOG1330 Sugar transporter/spin 99.9 1.4E-22 3E-27 195.6 15.2 368 4-396 8-395 (493)
66 TIGR00898 2A0119 cation transp 99.9 3.4E-21 7.4E-26 198.7 26.8 349 50-432 111-494 (505)
67 TIGR00889 2A0110 nucleoside tr 99.9 4.1E-20 8.9E-25 186.0 33.2 383 30-444 4-414 (418)
68 TIGR00902 2A0127 phenyl propri 99.9 4.8E-20 1E-24 183.4 33.0 337 29-408 5-351 (382)
69 PRK08633 2-acyl-glycerophospho 99.9 4.4E-20 9.6E-25 208.5 36.7 319 65-406 53-378 (1146)
70 PRK06814 acylglycerophosphoeth 99.9 4.6E-20 9.9E-25 208.1 36.7 311 65-406 58-390 (1140)
71 TIGR00896 CynX cyanate transpo 99.9 1.3E-20 2.9E-25 185.4 27.1 319 47-407 19-343 (355)
72 COG2223 NarK Nitrate/nitrite t 99.9 2.2E-20 4.8E-25 179.1 27.5 379 21-436 7-404 (417)
73 PRK11128 putative 3-phenylprop 99.9 7.4E-20 1.6E-24 182.1 32.3 335 33-409 9-352 (382)
74 TIGR00885 fucP L-fucose:H+ sym 99.9 1.4E-19 3E-24 181.6 33.4 345 29-405 4-374 (410)
75 PRK10207 dipeptide/tripeptide 99.9 1E-18 2.3E-23 178.7 35.5 401 22-442 8-485 (489)
76 TIGR00882 2A0105 oligosacchari 99.9 6.2E-19 1.3E-23 176.2 32.5 366 28-429 2-391 (396)
77 PRK11902 ampG muropeptide tran 99.9 1.7E-18 3.6E-23 173.5 35.6 349 50-435 21-392 (402)
78 PRK15011 sugar efflux transpor 99.9 3.1E-18 6.7E-23 171.1 35.3 334 54-432 42-390 (393)
79 TIGR00806 rfc RFC reduced fola 99.9 5.8E-18 1.3E-22 166.8 34.7 321 45-398 43-401 (511)
80 KOG2532 Permease of the major 99.8 1.3E-19 2.9E-24 182.3 23.1 340 65-432 79-446 (466)
81 TIGR00901 2A0125 AmpG-related 99.8 1.4E-18 2.9E-23 171.2 30.0 323 49-396 9-355 (356)
82 KOG3764 Vesicular amine transp 99.8 5.4E-20 1.2E-24 174.2 17.8 336 58-433 101-454 (464)
83 TIGR00924 yjdL_sub1_fam amino 99.8 2.2E-17 4.7E-22 168.7 37.5 396 24-438 6-473 (475)
84 COG0738 FucP Fucose permease [ 99.8 3.1E-18 6.6E-23 163.4 28.4 351 26-408 11-380 (422)
85 PF05977 MFS_3: Transmembrane 99.8 1.4E-17 3.1E-22 170.4 34.2 324 70-431 56-392 (524)
86 KOG0569 Permease of the major 99.8 5.7E-18 1.2E-22 169.0 27.0 314 65-400 66-418 (485)
87 PF05978 UNC-93: Ion channel r 99.8 1.6E-19 3.5E-24 153.9 13.5 142 33-184 1-152 (156)
88 KOG2504 Monocarboxylate transp 99.8 1.1E-17 2.3E-22 170.5 28.8 372 30-433 45-476 (509)
89 COG2807 CynX Cyanate permease 99.8 1.1E-16 2.5E-21 150.5 31.2 341 49-433 33-385 (395)
90 PRK09584 tppB putative tripept 99.8 1.2E-15 2.5E-20 157.0 38.5 390 26-439 19-485 (500)
91 PTZ00207 hypothetical protein; 99.8 1E-16 2.2E-21 164.8 29.1 119 47-176 46-174 (591)
92 TIGR00792 gph sugar (Glycoside 99.8 9.4E-17 2E-21 162.4 26.2 324 53-406 25-374 (437)
93 TIGR02718 sider_RhtX_FptX side 99.8 5.3E-15 1.1E-19 147.6 35.2 343 47-426 20-384 (390)
94 TIGR00805 oat sodium-independe 99.8 9.8E-17 2.1E-21 168.8 22.4 274 49-333 54-411 (633)
95 KOG2615 Permease of the major 99.7 5.2E-16 1.1E-20 146.5 24.4 312 68-408 77-410 (451)
96 KOG0254 Predicted transporter 99.7 2.3E-15 4.9E-20 155.6 25.2 139 65-224 95-234 (513)
97 KOG4686 Predicted sugar transp 99.7 2.9E-17 6.3E-22 148.7 7.2 355 41-433 57-443 (459)
98 PF06609 TRI12: Fungal trichot 99.7 4.1E-14 9E-19 144.9 30.8 308 68-403 87-458 (599)
99 PRK09669 putative symporter Ya 99.7 5.6E-14 1.2E-18 142.7 29.9 320 54-405 36-381 (444)
100 PF01306 LacY_symp: LacY proto 99.7 4.5E-14 9.7E-19 138.6 27.0 376 25-438 4-405 (412)
101 PF03825 Nuc_H_symport: Nucleo 99.7 2.5E-13 5.5E-18 135.1 31.9 346 31-408 5-360 (400)
102 TIGR01272 gluP glucose/galacto 99.7 1.7E-14 3.7E-19 139.2 22.8 269 108-406 7-284 (310)
103 TIGR01301 GPH_sucrose GPH fami 99.7 1.7E-13 3.8E-18 138.3 30.1 393 28-434 4-472 (477)
104 PF11700 ATG22: Vacuole efflux 99.7 1E-12 2.2E-17 133.4 35.7 365 65-439 76-474 (477)
105 KOG0255 Synaptic vesicle trans 99.6 4.9E-14 1.1E-18 146.1 25.3 316 58-406 117-462 (521)
106 TIGR00788 fbt folate/biopterin 99.6 3.7E-13 8.1E-18 137.3 30.8 335 49-406 47-407 (468)
107 PRK10429 melibiose:sodium symp 99.6 5.6E-13 1.2E-17 136.5 31.9 323 56-403 35-384 (473)
108 PF00083 Sugar_tr: Sugar (and 99.6 7.5E-20 1.6E-24 186.0 -19.2 341 64-427 51-430 (451)
109 KOG0252 Inorganic phosphate tr 99.6 3E-15 6.5E-20 144.6 9.5 107 65-181 90-204 (538)
110 PRK09848 glucuronide transport 99.6 1.3E-12 2.8E-17 132.9 28.8 311 53-404 34-380 (448)
111 KOG2563 Permease of the major 99.6 1.4E-12 3.1E-17 126.3 25.0 305 71-401 91-411 (480)
112 PRK15462 dipeptide/tripeptide 99.5 5.9E-11 1.3E-15 120.5 35.3 357 26-402 7-430 (493)
113 PF13347 MFS_2: MFS/sugar tran 99.5 7.8E-13 1.7E-17 133.7 21.6 314 56-403 30-375 (428)
114 PRK11462 putative transporter; 99.5 5.2E-11 1.1E-15 121.4 32.6 309 57-401 39-376 (460)
115 COG2270 Permeases of the major 99.4 1.4E-10 3E-15 112.1 24.6 339 71-435 70-431 (438)
116 COG2211 MelB Na+/melibiose sym 99.4 5.8E-10 1.2E-14 110.9 28.6 316 56-402 41-386 (467)
117 COG3104 PTR2 Dipeptide/tripept 99.4 1.4E-09 3.1E-14 107.4 30.4 399 25-443 18-497 (498)
118 KOG0253 Synaptic vesicle trans 99.4 5.3E-11 1.1E-15 112.3 18.9 330 68-431 122-517 (528)
119 PF03209 PUCC: PUCC protein; 99.4 4.5E-09 9.7E-14 102.0 31.9 327 72-432 27-397 (403)
120 TIGR01299 synapt_SV2 synaptic 99.2 6.3E-10 1.4E-14 118.3 16.7 129 71-222 607-736 (742)
121 KOG2325 Predicted transporter/ 99.2 3.3E-09 7.2E-14 105.8 19.8 104 66-180 78-188 (488)
122 PRK05122 major facilitator sup 99.1 3.2E-09 6.9E-14 106.2 17.9 135 66-222 256-391 (399)
123 PF05631 DUF791: Protein of un 99.1 7.6E-08 1.6E-12 92.1 25.7 236 55-316 61-304 (354)
124 TIGR00889 2A0110 nucleoside tr 99.1 3.8E-09 8.2E-14 106.5 17.0 136 71-222 263-405 (418)
125 PRK10054 putative transporter; 99.1 3.1E-09 6.8E-14 106.3 15.7 165 257-429 9-178 (395)
126 TIGR00924 yjdL_sub1_fam amino 99.0 4.8E-09 1E-13 107.4 15.3 151 276-434 31-193 (475)
127 TIGR00900 2A0121 H+ Antiporter 99.0 4.8E-09 1E-13 102.8 14.6 142 285-430 29-176 (365)
128 TIGR00880 2_A_01_02 Multidrug 99.0 7.8E-09 1.7E-13 86.3 13.9 101 71-181 10-111 (141)
129 PRK15011 sugar efflux transpor 99.0 2.2E-08 4.8E-13 100.0 19.2 128 71-221 264-392 (393)
130 PF03092 BT1: BT1 family; Int 99.0 1.3E-07 2.9E-12 95.5 23.4 332 50-402 12-370 (433)
131 KOG2816 Predicted transporter 99.0 2.2E-07 4.8E-12 93.8 24.6 295 74-403 77-383 (463)
132 TIGR00902 2A0127 phenyl propri 98.9 4.1E-08 8.9E-13 97.7 18.1 145 28-183 205-355 (382)
133 PRK12382 putative transporter; 98.9 3.3E-08 7.1E-13 98.6 17.3 126 71-218 261-387 (392)
134 PF07690 MFS_1: Major Facilita 98.9 1E-08 2.2E-13 100.1 13.2 135 286-428 28-167 (352)
135 TIGR00710 efflux_Bcr_CflA drug 98.9 1.6E-08 3.4E-13 100.2 14.7 138 285-430 35-177 (385)
136 PRK03545 putative arabinose tr 98.9 2.1E-08 4.5E-13 100.1 15.2 136 286-429 40-180 (390)
137 PRK10091 MFS transport protein 98.9 2.5E-08 5.4E-13 99.2 15.3 163 257-427 5-172 (382)
138 PRK09584 tppB putative tripept 98.9 5.5E-08 1.2E-12 100.2 17.9 179 251-437 16-205 (500)
139 PRK10489 enterobactin exporter 98.9 2.8E-08 6E-13 100.1 15.3 176 252-431 14-195 (417)
140 PRK11551 putative 3-hydroxyphe 98.9 7.4E-08 1.6E-12 96.5 17.8 124 50-183 242-370 (406)
141 PRK10207 dipeptide/tripeptide 98.9 5.4E-08 1.2E-12 99.9 16.7 143 287-436 47-197 (489)
142 PRK15462 dipeptide/tripeptide 98.9 5.5E-08 1.2E-12 99.0 16.3 144 286-436 41-192 (493)
143 PRK10213 nepI ribonucleoside t 98.9 4.9E-08 1.1E-12 97.6 15.8 133 285-425 50-187 (394)
144 PRK11663 regulatory protein Uh 98.9 7.1E-08 1.5E-12 97.7 17.1 133 285-425 53-190 (434)
145 cd06174 MFS The Major Facilita 98.9 7.4E-08 1.6E-12 93.6 16.5 136 59-216 207-348 (352)
146 TIGR00899 2A0120 sugar efflux 98.9 1.4E-07 3E-12 93.2 18.3 125 73-220 249-374 (375)
147 PF11700 ATG22: Vacuole efflux 98.9 1.4E-07 3E-12 96.1 18.1 176 25-221 278-469 (477)
148 PRK10504 putative transporter; 98.8 5.2E-08 1.1E-12 99.7 14.7 167 257-431 12-183 (471)
149 TIGR02332 HpaX 4-hydroxyphenyl 98.8 4.5E-08 9.8E-13 98.5 13.8 133 286-426 39-182 (412)
150 TIGR00890 2A0111 Oxalate/Forma 98.8 7.1E-08 1.5E-12 94.8 14.9 144 29-182 206-356 (377)
151 PRK11195 lysophospholipid tran 98.8 5.2E-08 1.1E-12 97.4 14.0 112 287-409 35-147 (393)
152 PF05977 MFS_3: Transmembrane 98.8 6.9E-08 1.5E-12 99.4 15.1 176 250-432 5-189 (524)
153 PRK10473 multidrug efflux syst 98.8 8.7E-08 1.9E-12 95.6 15.6 135 286-428 34-173 (392)
154 PRK10642 proline/glycine betai 98.8 2.9E-07 6.4E-12 94.8 19.8 162 42-224 264-434 (490)
155 PRK11646 multidrug resistance 98.8 7.5E-08 1.6E-12 96.5 15.0 136 285-428 41-180 (400)
156 TIGR00885 fucP L-fucose:H+ sym 98.8 9.7E-08 2.1E-12 96.0 15.6 146 257-407 5-151 (410)
157 PRK11102 bicyclomycin/multidru 98.8 6.1E-08 1.3E-12 95.9 13.5 137 285-429 21-162 (377)
158 TIGR00891 2A0112 putative sial 98.8 1E-07 2.3E-12 94.9 15.1 114 286-407 43-157 (405)
159 PRK03699 putative transporter; 98.8 2.1E-07 4.6E-12 93.0 17.2 171 28-221 205-381 (394)
160 PRK09705 cynX putative cyanate 98.8 9.9E-08 2.1E-12 95.4 14.8 115 286-408 40-154 (393)
161 PF01770 Folate_carrier: Reduc 98.8 1.3E-05 2.9E-10 78.8 29.0 294 73-396 55-386 (412)
162 PRK03633 putative MFS family t 98.8 6.9E-08 1.5E-12 96.0 13.5 146 256-409 7-153 (381)
163 TIGR00711 efflux_EmrB drug res 98.8 7.5E-08 1.6E-12 98.7 13.3 137 286-430 33-174 (485)
164 PRK09874 drug efflux system pr 98.8 1.3E-07 2.9E-12 94.6 14.8 124 73-218 272-396 (408)
165 PRK11902 ampG muropeptide tran 98.8 1.8E-07 3.9E-12 93.7 15.7 159 263-428 7-177 (402)
166 PRK09528 lacY galactoside perm 98.8 2.5E-07 5.5E-12 93.2 16.7 130 70-221 273-405 (420)
167 KOG3626 Organic anion transpor 98.8 3.3E-07 7.1E-12 95.5 17.1 196 111-318 237-457 (735)
168 TIGR00712 glpT glycerol-3-phos 98.7 5.9E-07 1.3E-11 91.1 18.3 140 284-427 55-200 (438)
169 PRK15402 multidrug efflux syst 98.7 1.8E-07 4E-12 93.7 14.4 136 286-429 44-184 (406)
170 PRK15403 multidrug efflux syst 98.7 2.5E-07 5.4E-12 93.1 15.2 135 287-429 48-187 (413)
171 PRK11043 putative transporter; 98.7 2.5E-07 5.4E-12 92.6 15.0 138 286-431 37-179 (401)
172 PRK11652 emrD multidrug resist 98.7 2.7E-07 5.8E-12 92.1 15.0 141 276-424 29-174 (394)
173 PRK14995 methyl viologen resis 98.7 2.9E-07 6.3E-12 94.9 15.5 158 266-431 17-180 (495)
174 TIGR00893 2A0114 d-galactonate 98.7 9.9E-08 2.1E-12 94.2 11.4 136 286-429 25-165 (399)
175 PRK11128 putative 3-phenylprop 98.7 8.8E-07 1.9E-11 88.1 18.0 145 28-183 205-355 (382)
176 COG2270 Permeases of the major 98.7 3.4E-07 7.4E-12 88.9 14.3 177 25-222 249-431 (438)
177 PRK11273 glpT sn-glycerol-3-ph 98.7 1.1E-06 2.5E-11 89.4 18.6 139 282-426 55-201 (452)
178 TIGR00897 2A0118 polyol permea 98.7 5E-07 1.1E-11 90.6 15.4 118 284-406 42-162 (402)
179 TIGR00882 2A0105 oligosacchari 98.7 1.7E-07 3.6E-12 93.7 11.9 175 254-430 1-180 (396)
180 PRK10133 L-fucose transporter; 98.7 8.4E-07 1.8E-11 90.0 16.9 115 286-406 57-173 (438)
181 TIGR00898 2A0119 cation transp 98.7 7.6E-07 1.6E-11 92.0 16.9 128 72-223 368-498 (505)
182 PRK09556 uhpT sugar phosphate 98.7 7.9E-07 1.7E-11 91.0 16.8 181 28-220 258-449 (467)
183 PRK11010 ampG muropeptide tran 98.7 9.8E-07 2.1E-11 90.9 17.4 175 250-431 7-193 (491)
184 TIGR00879 SP MFS transporter, 98.6 3.5E-07 7.5E-12 93.0 13.6 136 289-429 70-213 (481)
185 TIGR01301 GPH_sucrose GPH fami 98.6 5.7E-07 1.2E-11 91.3 14.8 167 264-432 11-217 (477)
186 KOG4332 Predicted sugar transp 98.6 2.4E-05 5.1E-10 71.5 23.2 320 74-431 87-429 (454)
187 PLN00028 nitrate transmembrane 98.6 3.9E-07 8.5E-12 93.5 13.6 137 286-431 67-217 (476)
188 PF03137 OATP: Organic Anion T 98.6 5.2E-09 1.1E-13 108.0 -0.3 257 50-318 25-370 (539)
189 TIGR00895 2A0115 benzoate tran 98.6 5.5E-07 1.2E-11 89.3 13.8 140 31-180 253-397 (398)
190 TIGR00881 2A0104 phosphoglycer 98.6 1.3E-07 2.8E-12 93.1 9.0 134 286-427 26-165 (379)
191 TIGR00886 2A0108 nitrite extru 98.6 6.8E-07 1.5E-11 88.0 14.1 113 286-406 33-146 (366)
192 PRK12307 putative sialic acid 98.6 4.9E-07 1.1E-11 91.2 13.2 124 286-417 49-177 (426)
193 PRK08633 2-acyl-glycerophospho 98.6 9.7E-07 2.1E-11 100.3 15.9 113 291-409 48-162 (1146)
194 KOG4686 Predicted sugar transp 98.6 2.1E-06 4.7E-11 78.9 14.8 145 25-184 261-415 (459)
195 TIGR00896 CynX cyanate transpo 98.6 7.3E-07 1.6E-11 87.6 12.8 114 285-407 30-143 (355)
196 PRK03893 putative sialic acid 98.6 1.1E-06 2.3E-11 90.5 14.4 125 286-418 51-180 (496)
197 PRK15034 nitrate/nitrite trans 98.6 3.5E-06 7.6E-11 85.0 17.5 111 286-403 66-180 (462)
198 PF01306 LacY_symp: LacY proto 98.5 3.6E-06 7.9E-11 83.2 16.7 147 53-221 249-402 (412)
199 TIGR00880 2_A_01_02 Multidrug 98.5 3.7E-07 8E-12 76.1 8.4 126 297-430 5-135 (141)
200 TIGR00883 2A0106 metabolite-pr 98.5 1.2E-06 2.6E-11 86.6 13.2 144 30-183 221-375 (394)
201 TIGR00892 2A0113 monocarboxyla 98.5 4.9E-07 1.1E-11 92.2 10.5 145 28-182 241-394 (455)
202 TIGR00792 gph sugar (Glycoside 98.5 2.1E-06 4.6E-11 86.8 14.9 110 70-182 268-379 (437)
203 TIGR00901 2A0125 AmpG-related 98.5 7.4E-07 1.6E-11 87.6 11.1 128 30-167 211-355 (356)
204 COG2814 AraJ Arabinose efflux 98.5 4.4E-06 9.6E-11 81.8 16.2 169 258-434 16-189 (394)
205 KOG1330 Sugar transporter/spin 98.5 2.8E-08 6.1E-13 97.2 0.6 138 286-431 64-207 (493)
206 TIGR00903 2A0129 major facilit 98.5 1.5E-06 3.2E-11 86.1 12.9 137 286-431 22-163 (368)
207 PRK09952 shikimate transporter 98.5 1.1E-05 2.3E-10 82.0 19.1 130 72-221 299-434 (438)
208 KOG3764 Vesicular amine transp 98.5 4.5E-07 9.7E-12 87.2 8.0 139 289-435 105-249 (464)
209 PF03825 Nuc_H_symport: Nucleo 98.5 8E-06 1.7E-10 81.6 17.3 101 74-184 258-365 (400)
210 PRK10077 xylE D-xylose transpo 98.5 1.4E-06 3.1E-11 89.2 12.4 140 287-429 52-211 (479)
211 PRK06814 acylglycerophosphoeth 98.5 3.5E-06 7.5E-11 95.8 16.4 114 291-409 53-167 (1140)
212 TIGR00887 2A0109 phosphate:H+ 98.4 2.8E-06 6E-11 87.8 13.5 138 74-223 350-492 (502)
213 PRK09848 glucuronide transport 98.4 2.4E-06 5.2E-11 86.9 12.7 153 26-181 226-386 (448)
214 TIGR00894 2A0114euk Na(+)-depe 98.4 1.1E-06 2.5E-11 89.7 10.4 139 286-430 72-216 (465)
215 COG2271 UhpC Sugar phosphate p 98.4 4.1E-06 8.8E-11 81.5 12.5 142 287-436 61-209 (448)
216 PRK10406 alpha-ketoglutarate t 98.4 9.8E-06 2.1E-10 82.1 15.5 129 293-424 66-210 (432)
217 TIGR00805 oat sodium-independe 98.4 2.4E-06 5.3E-11 90.4 11.2 119 286-407 64-229 (633)
218 TIGR00769 AAA ADP/ATP carrier 98.4 0.0012 2.5E-08 67.0 29.8 281 24-323 3-336 (472)
219 PF13347 MFS_2: MFS/sugar tran 98.3 1.6E-05 3.4E-10 80.4 16.0 152 28-182 225-383 (428)
220 TIGR02718 sider_RhtX_FptX side 98.3 2.8E-05 6.1E-10 77.5 17.4 125 50-183 230-366 (390)
221 TIGR01272 gluP glucose/galacto 98.3 4.8E-05 1E-09 73.4 17.3 105 65-182 184-289 (310)
222 PTZ00207 hypothetical protein; 98.3 2E-05 4.3E-10 82.0 15.3 138 286-428 58-200 (591)
223 TIGR00806 rfc RFC reduced fola 98.2 1.8E-05 3.9E-10 79.2 13.4 139 285-432 56-202 (511)
224 PF06813 Nodulin-like: Nodulin 98.2 5.4E-05 1.2E-09 70.1 15.7 122 49-181 23-155 (250)
225 KOG3574 Acetyl-CoA transporter 98.2 0.0011 2.4E-08 63.9 24.0 355 23-399 26-418 (510)
226 COG2223 NarK Nitrate/nitrite t 98.2 3.3E-05 7.2E-10 75.3 14.3 168 260-435 18-195 (417)
227 PRK15075 citrate-proton sympor 98.2 6.1E-05 1.3E-09 76.3 17.1 127 46-182 256-393 (434)
228 PF06609 TRI12: Fungal trichot 98.1 4E-05 8.6E-10 79.4 13.8 138 285-431 72-215 (599)
229 KOG0253 Synaptic vesicle trans 98.1 3.5E-05 7.6E-10 73.7 12.0 119 74-220 396-519 (528)
230 COG3104 PTR2 Dipeptide/tripept 98.1 2.2E-05 4.8E-10 78.2 11.2 142 291-438 62-211 (498)
231 PRK09669 putative symporter Ya 98.1 7.9E-05 1.7E-09 75.7 15.5 107 73-182 278-387 (444)
232 COG2211 MelB Na+/melibiose sym 98.0 0.00028 6.2E-09 70.7 16.3 153 26-182 234-395 (467)
233 PRK10429 melibiose:sodium symp 98.0 0.00012 2.6E-09 75.1 14.2 112 286-399 38-156 (473)
234 KOG3762 Predicted transporter 98.0 2.4E-05 5.2E-10 78.2 8.3 121 74-216 421-543 (618)
235 KOG2615 Permease of the major 97.9 3E-05 6.6E-10 74.4 8.2 111 291-411 69-181 (451)
236 PRK11462 putative transporter; 97.9 0.00027 5.9E-09 72.2 15.7 115 286-402 41-162 (460)
237 KOG0254 Predicted transporter 97.9 9.7E-05 2.1E-09 76.6 12.3 130 291-428 90-225 (513)
238 KOG2325 Predicted transporter/ 97.9 0.00017 3.7E-09 72.5 12.5 143 285-432 66-228 (488)
239 KOG0255 Synaptic vesicle trans 97.9 0.00016 3.5E-09 75.0 12.8 131 291-430 119-252 (521)
240 PF03219 TLC: TLC ATP/ADP tran 97.8 0.041 8.9E-07 56.3 29.2 281 25-322 21-351 (491)
241 COG0738 FucP Fucose permease [ 97.8 0.00026 5.6E-09 68.8 12.6 116 286-406 44-160 (422)
242 KOG2532 Permease of the major 97.8 0.0001 2.2E-09 74.9 10.2 141 288-434 71-217 (466)
243 PF06963 FPN1: Ferroportin1 (F 97.8 0.055 1.2E-06 54.4 28.8 127 279-406 282-412 (432)
244 PF06813 Nodulin-like: Nodulin 97.8 0.0005 1.1E-08 63.7 12.8 124 276-401 22-146 (250)
245 KOG2504 Monocarboxylate transp 97.7 0.00033 7.2E-09 72.0 12.6 144 28-181 298-448 (509)
246 KOG0252 Inorganic phosphate tr 97.7 0.00034 7.4E-09 69.0 11.1 113 290-403 84-201 (538)
247 KOG3762 Predicted transporter 97.6 0.00069 1.5E-08 68.1 12.2 186 244-439 360-553 (618)
248 KOG0569 Permease of the major 97.6 0.00061 1.3E-08 69.0 12.1 108 294-406 64-172 (485)
249 TIGR00788 fbt folate/biopterin 97.6 0.00082 1.8E-08 68.8 13.0 117 58-184 283-414 (468)
250 KOG3810 Micronutrient transpor 97.6 0.018 3.9E-07 55.1 20.0 331 77-438 60-426 (433)
251 COG0477 ProP Permeases of the 97.5 0.003 6.4E-08 59.1 14.9 110 64-183 44-158 (338)
252 COG2807 CynX Cyanate permease 97.5 0.0027 5.8E-08 61.1 13.8 138 286-432 43-185 (395)
253 PF03209 PUCC: PUCC protein; 97.5 0.0032 7E-08 61.7 14.6 137 304-440 28-187 (403)
254 PF02487 CLN3: CLN3 protein; 97.4 0.043 9.3E-07 54.4 21.9 92 74-180 74-166 (402)
255 TIGR00926 2A1704 Peptide:H+ sy 97.1 0.005 1.1E-07 65.3 12.3 140 294-436 27-185 (654)
256 PF12832 MFS_1_like: MFS_1 lik 97.1 0.0014 2.9E-08 49.0 5.7 51 276-326 21-71 (77)
257 TIGR00926 2A1704 Peptide:H+ sy 97.0 0.016 3.5E-07 61.5 15.1 131 74-216 38-178 (654)
258 PF05631 DUF791: Protein of un 96.9 0.057 1.2E-06 52.2 16.4 87 284-379 63-150 (354)
259 KOG2533 Permease of the major 96.9 0.0038 8.2E-08 63.9 8.8 130 289-426 80-220 (495)
260 KOG0637 Sucrose transporter an 96.7 0.12 2.5E-06 51.5 17.1 28 296-323 338-365 (498)
261 PF00083 Sugar_tr: Sugar (and 96.7 0.0001 2.3E-09 74.8 -4.1 110 291-406 47-158 (451)
262 KOG0637 Sucrose transporter an 96.3 0.01 2.2E-07 58.8 7.1 145 264-410 39-203 (498)
263 PF12832 MFS_1_like: MFS_1 lik 96.1 0.048 1E-06 40.6 8.2 68 31-98 3-74 (77)
264 PF00854 PTR2: POT family; In 96.0 0.029 6.4E-07 55.5 9.0 116 324-439 4-129 (372)
265 TIGR00769 AAA ADP/ATP carrier 95.8 0.61 1.3E-05 47.6 17.3 64 371-434 149-229 (472)
266 PF13000 Acatn: Acetyl-coenzym 95.7 2.9 6.3E-05 42.5 23.8 73 240-314 263-337 (544)
267 PF05978 UNC-93: Ion channel r 95.0 0.47 1E-05 40.6 11.4 94 300-402 47-141 (156)
268 KOG2563 Permease of the major 94.9 0.94 2E-05 45.3 14.5 116 291-408 80-198 (480)
269 PF02487 CLN3: CLN3 protein; 94.8 0.45 9.7E-06 47.3 12.2 65 107-181 331-395 (402)
270 COG3202 ATP/ADP translocase [E 94.7 5.4 0.00012 40.4 30.1 149 25-183 24-210 (509)
271 KOG2816 Predicted transporter 94.7 0.41 8.9E-06 48.8 12.2 149 19-178 231-387 (463)
272 COG0477 ProP Permeases of the 94.3 1.3 2.8E-05 41.0 14.0 110 291-406 40-152 (338)
273 PF00854 PTR2: POT family; In 94.0 0.37 8E-06 47.7 9.9 108 90-216 2-119 (372)
274 PRK03612 spermidine synthase; 93.8 1.9 4.2E-05 44.7 15.1 26 291-316 51-76 (521)
275 PF07672 MFS_Mycoplasma: Mycop 93.7 0.84 1.8E-05 42.3 10.7 81 294-376 145-229 (267)
276 PF03092 BT1: BT1 family; Int 93.3 0.72 1.6E-05 46.7 10.7 121 305-428 39-170 (433)
277 TIGR00939 2a57 Equilibrative N 93.0 11 0.00025 38.1 26.1 110 293-403 310-425 (437)
278 KOG3626 Organic anion transpor 92.1 0.56 1.2E-05 49.9 8.1 172 263-439 105-349 (735)
279 KOG1479 Nucleoside transporter 91.6 15 0.00033 36.4 23.0 107 293-402 285-395 (406)
280 TIGR00939 2a57 Equilibrative N 91.0 3.8 8.3E-05 41.5 12.7 59 112-180 373-431 (437)
281 KOG3098 Uncharacterized conser 91.0 6.3 0.00014 40.0 14.0 79 83-172 306-403 (461)
282 PF03137 OATP: Organic Anion T 90.3 0.079 1.7E-06 55.1 -0.2 119 287-406 35-197 (539)
283 PF06779 DUF1228: Protein of u 88.3 1.5 3.2E-05 33.3 5.5 61 274-335 11-71 (85)
284 PF06963 FPN1: Ferroportin1 (F 85.4 18 0.00039 36.6 13.1 140 28-177 258-412 (432)
285 KOG1237 H+/oligopeptide sympor 83.1 23 0.00049 37.3 13.1 151 48-216 58-241 (571)
286 KOG3574 Acetyl-CoA transporter 82.5 22 0.00048 35.2 11.6 70 256-328 32-106 (510)
287 PF06779 DUF1228: Protein of u 82.4 7.7 0.00017 29.4 6.9 63 44-106 8-74 (85)
288 PF01770 Folate_carrier: Reduc 81.5 9.6 0.00021 38.1 9.2 115 309-432 60-181 (412)
289 PF03219 TLC: TLC ATP/ADP tran 79.2 82 0.0018 32.5 18.5 67 255-322 24-91 (491)
290 PRK03612 spermidine synthase; 72.8 1.2E+02 0.0027 31.4 16.9 28 154-181 142-169 (521)
291 KOG3880 Predicted small molecu 72.5 62 0.0013 31.2 11.1 55 352-406 343-398 (409)
292 KOG4830 Predicted sugar transp 63.8 74 0.0016 29.9 9.6 85 353-437 295-400 (412)
293 COG3202 ATP/ADP translocase [E 62.7 1.9E+02 0.0041 29.7 17.0 175 255-434 27-246 (509)
294 PF01733 Nucleoside_tran: Nucl 60.5 3.2 7E-05 39.9 0.4 108 295-403 187-301 (309)
295 KOG1479 Nucleoside transporter 59.4 1.1E+02 0.0023 30.6 10.7 75 352-430 118-201 (406)
296 PF11947 DUF3464: Protein of u 51.0 42 0.00092 28.5 5.5 49 108-169 94-142 (153)
297 KOG4332 Predicted sugar transp 50.0 59 0.0013 30.7 6.6 87 285-380 67-154 (454)
298 TIGR01478 STEVOR variant surfa 41.5 46 0.001 31.1 4.6 37 400-436 250-286 (295)
299 PF02990 EMP70: Endomembrane p 41.2 4.3E+02 0.0094 27.5 12.8 25 295-319 302-326 (521)
300 PTZ00370 STEVOR; Provisional 40.8 47 0.001 31.1 4.6 37 400-436 246-282 (296)
301 KOG4112 Signal peptidase subun 35.8 79 0.0017 24.2 4.2 50 389-438 26-76 (101)
302 PF11118 DUF2627: Protein of u 34.2 67 0.0014 23.6 3.5 19 427-445 57-75 (77)
303 PF01733 Nucleoside_tran: Nucl 32.7 16 0.00034 35.1 0.2 56 114-179 251-306 (309)
304 COG4769 Predicted membrane pro 30.1 2.1E+02 0.0045 24.7 6.3 46 73-123 87-132 (181)
305 PF13000 Acatn: Acetyl-coenzym 28.6 6.9E+02 0.015 26.0 11.6 48 112-169 406-453 (544)
306 CHL00031 psbT photosystem II p 26.9 1.4E+02 0.0029 18.1 3.3 20 208-227 11-31 (33)
307 COG4721 ABC-type cobalt transp 26.6 1.1E+02 0.0025 26.2 4.2 97 27-130 7-110 (192)
308 KOG1237 H+/oligopeptide sympor 26.3 1.5E+02 0.0033 31.2 6.2 133 302-434 85-246 (571)
309 PF09819 ABC_cobalt: ABC-type 25.6 3.8E+02 0.0082 22.0 9.0 67 60-129 35-101 (129)
310 PF04341 DUF485: Protein of un 24.8 2.5E+02 0.0054 21.4 5.6 45 26-70 14-59 (91)
311 PF07672 MFS_Mycoplasma: Mycop 24.1 4.3E+02 0.0093 24.8 7.9 46 111-164 204-249 (267)
312 COG5336 Uncharacterized protei 23.0 2.8E+02 0.006 22.1 5.4 34 391-424 52-86 (116)
313 PF01925 TauE: Sulfite exporte 22.4 5.7E+02 0.012 22.9 11.0 25 389-413 171-195 (240)
No 1
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.9e-31 Score=262.62 Aligned_cols=394 Identities=26% Similarity=0.397 Sum_probs=291.0
Q ss_pred cccccchhHHHHHHHHHHHHHHhhhHhhhhhhc----c------CCCCchHHHHHHHHHHHHhhhhHHHHHHHhCcchhh
Q 013318 23 PKNYTRDVHILSCAFLLIFLAYGAAQNLETTVN----T------EGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNAL 92 (445)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~----~------~~~~g~~~~~~~~~~~ai~~l~~g~l~dr~G~k~~l 92 (445)
.++..+++..++.++++.+.+|++...+++++. + +.+-|+...+++|..++++++++|.+.|+.|+|+.|
T Consensus 4 ~~~~~~~v~~lg~g~~~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~l 83 (461)
T KOG3098|consen 4 RRFELLNVLMLGFGFLFLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWAL 83 (461)
T ss_pred ccchhheeeehhhhHHHHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHH
Confidence 456789999999999999999998877766542 1 245677889999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHhhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhh
Q 013318 93 ILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFV 172 (445)
Q Consensus 93 ~~g~~~~~~~~~~~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~i 172 (445)
++|..++..+..+++.+|-+.++.+.++.|+|.+..|++++.|++++++ ++++.++.++.|+....+.++
T Consensus 84 v~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~~st----------~~tie~Nisi~Wai~~~~li~ 153 (461)
T KOG3098|consen 84 VIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNST----------RETIERNISIFWAIGQSSLII 153 (461)
T ss_pred HHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhhcCC----------hhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998888999999999999999999999999984 578999999999999999999
Q ss_pred hhHHHHHhhcCccccccccCCCCCcchh----------HHHHHHHHHHH---HHHHHHhccCCcccCcccccccchhhhh
Q 013318 173 GNLITLAVLKDDKVCAALLGGSTSGTTL----------LFIVFLGVITL---GTILMCFLRKEEDKGEKETADASVNFYS 239 (445)
Q Consensus 173 G~li~~~l~~~~~~~~~~~~~~~~w~~~----------~~~i~~~l~~~---~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 239 (445)
|+.+...+.++....+.. ..+.++. ....+.++..+ +.+...+.|.++....++ ..+ .
T Consensus 154 Ggi~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~-----~~~-~ 224 (461)
T KOG3098|consen 154 GGIILFIYFQFSSSSAII---TDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKDVVNCKS-----SSE-T 224 (461)
T ss_pred hhHhheeeeEeccccccc---ccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccchhhhhh-----hcc-c
Confidence 998776665543311000 0111110 01111111111 111112233222111111 111 3
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccc---hhHHHHHHHHHHHHHHHhhhhcccc
Q 013318 240 YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVS---GVGGAMAVYGAFDAICSLAAGRLTT 315 (445)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~---~~g~~~~~~~i~~~~g~~~~G~l~d 315 (445)
+..+.++...+++++|+++.+.|.+++.|++.+||.+.+|..+.. +..+.. ..+..+...++++++++...+.+.|
T Consensus 225 ~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~ 304 (461)
T KOG3098|consen 225 SFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSK 304 (461)
T ss_pred cHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 556777888999999999999999999999999999999877632 222222 3566677888888888888877765
Q ss_pred C---CCCccchHhHHHHHHHHHHHHHHhhccCCCC------c---c--chhHHHHHHHHHhhhhhhhhhhhhHHHHhhcc
Q 013318 316 G---LPSITFIVSGGAIAQVVVFLWILINYSVTSG------V---L--GTLYPLIMAALLGIGDGVLNTQLSALLGILFK 381 (445)
Q Consensus 316 ~---~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~------~---~--~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~ 381 (445)
| +|++. .+..+.+++....+++.+..+.+.+ . + ...+.+++.+++|++|++++++.+.++++.+|
T Consensus 305 rir~fg~~~-~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~ 383 (461)
T KOG3098|consen 305 RIRGFGRKP-TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP 383 (461)
T ss_pred hhhhcccCc-chhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 5 56655 4567777776665544444442221 0 1 12467889999999999999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 382 HDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQV 436 (445)
Q Consensus 382 ~~~~~a~~~~~~~~~~g~~ig~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 436 (445)
+++.++++++++.|+++.+++.+..+............+.+.++....+...++.
T Consensus 384 ~~~~~~fsi~kfyq~~~s~v~~f~~~~~~l~~~~l~~~i~~~i~~~~~~~~~~~~ 438 (461)
T KOG3098|consen 384 DDRAQAFSLFKFYQSVASCVAFFFSPYLLLYIYTLGLPIFCVIATTIFFIVAERT 438 (461)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888888777777666666666666665554433
No 2
>PRK03545 putative arabinose transporter; Provisional
Probab=99.96 E-value=3.2e-26 Score=228.39 Aligned_cols=363 Identities=15% Similarity=0.061 Sum_probs=238.0
Q ss_pred cchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHH----HHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHH
Q 013318 27 TRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGI----LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (445)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~----~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~ 102 (445)
+..++.+.++.++..........+.|.+.++.+.+....+. .+..+++++++.|++.||+|||+++..+..++.+.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 87 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIAS 87 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 33445555544443222223345567777777777655443 44456778899999999999999999998887776
Q ss_pred HHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 103 ~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
.... ..++++.+++.|+++|++.+..++...+++.++. |++||++++|++....++|.++|++++..+.
T Consensus 88 ~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~----------~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~ 157 (390)
T PRK03545 88 HVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVA----------PAGKKAQALSLLATGTALAMVLGLPLGRVIG 157 (390)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------ChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 6654 6799999999999999999999998888998887 4679999999999999999999999887765
Q ss_pred cCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHH
Q 013318 182 KDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI 260 (445)
Q Consensus 182 ~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 260 (445)
.+ .+||. .|.+.+++.++..+.. .++|++++ +++ .+ .++..+.+|+|+++..
T Consensus 158 ~~-----------~gw~~-~f~~~~~~~~l~~~~~~~~~~~~~~--~~~---------~~----~~~~~~~~~~~~~~~~ 210 (390)
T PRK03545 158 QY-----------LGWRT-TFLAIGGGALITLLLLIKLLPLLPS--EHS---------GS----LKSLPLLFRRPALVSL 210 (390)
T ss_pred HH-----------hcHHH-HHHHHHHHHHHHHHHHHHhCCCCCC--CCc---------ch----HHHHHHHHhCcHHHHH
Confidence 32 35764 4555555544443332 33444321 111 00 1123456788887644
Q ss_pred HHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHH
Q 013318 261 IPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL 339 (445)
Q Consensus 261 ~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~ 339 (445)
....+..........++.++++.+ .+.+.++.+..+...+++.++++++.|++.||.++|. + ..+..+...+... +
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-~-~~~~~~~~~~~~~-l 287 (390)
T PRK03545 211 YLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF-L-LIAIALLLVCLLL-L 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH-H-HHHHHHHHHHHHH-H
Confidence 332222111111111223333322 3455667888888999999999999999999998764 3 3343333333221 1
Q ss_pred hhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhc----chhHHHHH
Q 013318 340 INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP----YISLQAML 415 (445)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~ 415 (445)
....++ .....+..+++|++.+...+...+.+.+..|++++.+.|.++....+|..+|..+.+ ..++...+
T Consensus 288 ~~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~ 362 (390)
T PRK03545 288 LPAANS-----EWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIG 362 (390)
T ss_pred HHHhch-----HHHHHHHHHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHH
Confidence 122222 234556777888887776676777888888877777788777777777766665554 45677888
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013318 416 IVMVVGICVALVGILFLTI 434 (445)
Q Consensus 416 ~i~~~~~~~~~~~~~~~~~ 434 (445)
++.+++.+++.+...+..+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 363 YVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHHHcc
Confidence 8888888887777665554
No 3
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=99.96 E-value=1.5e-28 Score=225.36 Aligned_cols=355 Identities=34% Similarity=0.484 Sum_probs=274.1
Q ss_pred CCcCcccccccccc-ccc--CcccccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHHHHHHhhhhHHH
Q 013318 5 DSRDEEAPLVADSL-QVL--TPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASL 81 (445)
Q Consensus 5 ~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~ai~~l~~g~ 81 (445)
+-+++++++.+... +.+ ..+...||+.+++.++++.|.+|.+.+++|..++. +++..+.+.+|.....++++.|.
T Consensus 3 ~~~~~~~~~~s~~~~~~~~r~~~~~~knv~i~s~~fl~~f~a~~gl~nlq~~vn~--~lg~~sl~~~y~~l~~s~m~~~~ 80 (390)
T KOG3097|consen 3 LVGAYPNYNESEEEERRYRRKRLGILKNVLILSIAFLLTFTAYLGLQNLQTSVNY--DLGTVSLGALYLSLIDSSMFMPL 80 (390)
T ss_pred ccccccCCCCCCcccchhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc--CcccchhhhhhHHHHHHHHHHHH
Confidence 45677777766444 222 22348899999999999999999999999999885 88888899999999999999999
Q ss_pred HHHHhCcchhhhhhhHHHHHHHHHhhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhcc-CCCccchhhhhhh
Q 013318 82 VVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH-KLHEGTVIGSFNG 160 (445)
Q Consensus 82 l~dr~G~k~~l~~g~~~~~~~~~~~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~-~~~~~~~rg~~~g 160 (445)
+++++|.|++++++...+..|.+.+..|.+.+++++...+|+|++++|.+.++|+++..++|+..+ +...+..+.+..|
T Consensus 81 ~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg 160 (390)
T KOG3097|consen 81 LIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFG 160 (390)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeehh
Confidence 999999999999999999999999999999999999999999999999999999999999998877 3444556789999
Q ss_pred HHHHHHHHhhhhhhHHHHHhhcC-------------ccccccccCCC----CCcc--------hhHHHHHHHHHHHHHHH
Q 013318 161 EFWGMFASHQFVGNLITLAVLKD-------------DKVCAALLGGS----TSGT--------TLLFIVFLGVITLGTIL 215 (445)
Q Consensus 161 ~~~~~~~lg~~iG~li~~~l~~~-------------~~~~~~~~~~~----~~w~--------~~~~~i~~~l~~~~~~l 215 (445)
.++++++.+.++|++++..+... ...||+++.+. .+-+ ..+-.++..++++..++
T Consensus 161 ~Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~t~~~~CG~~f~~~g~~a~~nlt~p~~~~~lvls~i~L~c~via~~~ 240 (390)
T KOG3097|consen 161 EFFIIFQCAQVWGNLISSLIMTLFLHGALSGSNLTFSVECGANFCGSGDKAEGNLTLPPSYVILVLSLIFLPCMVIAVLI 240 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCccceeeeecccccCCccccccCCccCCCCCceEEeeHHHHHHHHHHHHH
Confidence 99999999999998876544321 12466643210 0000 01222445555555554
Q ss_pred HHhccCC---cccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccccccccchh
Q 013318 216 MCFLRKE---EDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGV 292 (445)
Q Consensus 216 ~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 292 (445)
+.+.-++ +.+++- ++ .+..+.+.-+.+.++++|+..+.|+..+.|++++|..+.+++.+..++++.+.+
T Consensus 241 ~~~~~~~l~r~~~~r~--~~------~~~l~i~~l~~~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V~c~~Gv~~i 312 (390)
T KOG3097|consen 241 MLFFLGALKRYGEKRL--AS------VSGLNIFQLTFKHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYVACALGVSRI 312 (390)
T ss_pred HHHHHHHHhhhhhhhh--hc------ccccchHHHHHHHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhhhhhhhHHHH
Confidence 4332211 111111 11 111234455678899999999999999999999999999999888899999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhh
Q 013318 293 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQL 372 (445)
Q Consensus 293 g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 372 (445)
|+.+..++++..+.+.++|-+..++||-. ....|.+.+.+.+. ....|.+.+.. ..+.++...+||.+|+.|++++
T Consensus 313 gf~m~cfgv~~Av~S~~~g~L~~~~gr~~-~~v~gavv~l~li~-~~~~w~~~~~~--~~i~y~~aalwgv~d~vw~t~i 388 (390)
T KOG3097|consen 313 GFAMACFGVGDAVASSLFGLLGKWIGRPP-LLVLGAVVHLLLIT-ILFFWAPNPQD--SWIFYVAAALWGVGDAVWKTQI 388 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcc-HHHHHHHHHHHHHH-HHHhcccCCCC--ceEEEeehhhcCccHHHHHhhc
Confidence 99999999999999999999999999765 55678777765543 34567766432 3567889999999999999765
Q ss_pred h
Q 013318 373 S 373 (445)
Q Consensus 373 ~ 373 (445)
+
T Consensus 389 n 389 (390)
T KOG3097|consen 389 N 389 (390)
T ss_pred C
Confidence 3
No 4
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.4e-25 Score=216.95 Aligned_cols=369 Identities=14% Similarity=0.084 Sum_probs=252.8
Q ss_pred CcccccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhH
Q 013318 22 TPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTT 97 (445)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~ 97 (445)
..++.+..++.+.++.+++-..-.....+.|++.++.+.+... .+......+++.++...+.||+.||++++....
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 4456777788888888777666666667788887777776544 344444667888999999999999999999998
Q ss_pred HHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHH
Q 013318 98 GYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (445)
Q Consensus 98 ~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li 176 (445)
++.+..+.+ .+||+..++++|++.|+..|..|+...++.++.. ||++|++++++......++.++|.++
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lv----------pp~~~~~Aiaiv~~G~tlA~v~GvPL 156 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLV----------PPGKRGRALALVFTGLTLATVLGVPL 156 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CccchhhHHHHHHHHHHHHHHHhccH
Confidence 888776654 7999999999999999999999999999999997 68899999999999999999999999
Q ss_pred HHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccc
Q 013318 177 TLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADV 255 (445)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (445)
+.++.+. +|||. .|.+..++.++..+.. ..+|+++..++++ ...++..+.+|+|
T Consensus 157 Gt~ig~~-----------~GWR~-~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~-------------~~~~~~~~~l~~p 211 (394)
T COG2814 157 GTFLGQL-----------FGWRA-TFLAIAVLALLALLLLWKLLPPSEISGSLP-------------GPLRTLLRLLRRP 211 (394)
T ss_pred HHHHHHH-----------hhHHH-HHHHHHHHHHHHHHHHHHhCCCccCCCCCC-------------cchhHHHHHhcCc
Confidence 9888644 47975 4444455555554433 4566111111111 0112345678899
Q ss_pred hhHHHHH--HHHHHHHHHHHHHhhhccccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHH
Q 013318 256 RMLLIIP--LFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV 332 (445)
Q Consensus 256 ~~~~l~~--~~~~~g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~ 332 (445)
+.+.... ...+.|....| ++..+.+. ..+++.+.+++++..+|++..+|+.++||+.|| +.|+.+ .....+..
T Consensus 212 ~v~~~l~~t~l~~~g~F~~f--tYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l-~~~~~l~a 287 (394)
T COG2814 212 GVLLGLLATFLFMTGHFALY--TYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRAL-IAALLLLA 287 (394)
T ss_pred hHHHHHHHHHHHHcchhhhH--HhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHH-HHHHHHHH
Confidence 8875443 23334433222 23333332 245666788999999999999999999999999 655533 34444444
Q ss_pred HHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHH----HHHHHHHHHHHHHHHhhcc
Q 013318 333 VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFA----QLKVWQCASIAVVFFIGPY 408 (445)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~----~~~~~~~~g~~ig~~i~~~ 408 (445)
+.++ .+ .+.++. ........++||+.........+...++..||+++.+.+ .+|....+|+.+|-.+-..
T Consensus 288 ~~~l-~l-~~~~~~----~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~ 361 (394)
T COG2814 288 LALL-AL-TFTGAS----PALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA 361 (394)
T ss_pred HHHH-HH-HHhcch----HHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4432 12 333232 245556666689887766666666677766788776554 4555555666655444444
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 409 ISLQAMLIVMVVGICVALVGILFLTIQ 435 (445)
Q Consensus 409 ~~~~~~~~i~~~~~~~~~~~~~~~~~~ 435 (445)
.++....+..+.+.+++.+..+...++
T Consensus 362 ~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 362 LGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 677777777777777777666544433
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.95 E-value=3.4e-26 Score=233.58 Aligned_cols=375 Identities=9% Similarity=-0.067 Sum_probs=228.7
Q ss_pred HHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-
Q 013318 32 ILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN- 106 (445)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~- 106 (445)
.+.+++++.+..........|.+.+|.+++... .+..+..+++++++.|++.||+|+|+++.++.+++++..+..
T Consensus 33 ~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~ 112 (467)
T PRK09556 33 VVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFG 112 (467)
T ss_pred HHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHH
Confidence 333334444555555566677787777776654 344556778899999999999999999998887766544432
Q ss_pred -----hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 107 -----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 107 -----~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
..+++..+++.|+++|++++..++...++++++. |++|||+++|++....++|.++|+++...+.
T Consensus 113 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~----------~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 113 ASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWT----------PRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHc----------CccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 2478999999999999999999999999999998 5789999999999989999999988775544
Q ss_pred cCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCC-cccCccccc----c---cchh----hhhHHHHHHHHH
Q 013318 182 KDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKE-EDKGEKETA----D---ASVN----FYSYLVSLSKSI 248 (445)
Q Consensus 182 ~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~-~~~~~~~~~----~---~~~~----~~~~~~~~~~~~ 248 (445)
.... ..+|+. .|.+.+++.++..++. ++++++ ++.+.++.+ + .+.. ++.+.++.. .
T Consensus 183 ~~~~--------~~~~~~-~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 251 (467)
T PRK09556 183 NYFF--------DGHVIG-MFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIF--V 251 (467)
T ss_pred Hhhc--------cCcchh-HHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHH--H
Confidence 3211 013553 3444444443333333 344543 221100000 0 0000 000001111 1
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHH
Q 013318 249 TTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGG 327 (445)
Q Consensus 249 ~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g 327 (445)
.+.+|+|+++.+....+...........+.|.++.+ .+++..+.+.......++.++++++.|+++||+++|+..+ .+
T Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~-~~ 330 (467)
T PRK09556 252 EYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALV-AC 330 (467)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH-HH
Confidence 136788888876654443332221222344544422 3556667788888899999999999999999999887443 33
Q ss_pred HHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHH-HHH-----
Q 013318 328 AIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCA-SIA----- 400 (445)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~-g~~----- 400 (445)
..+..++..+...... + + .....+..++.|++.............|.+|++ ++++.|+.+....+ |.+
T Consensus 331 ~~~~~~~~~~~~~~~~-~-~---~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~ 405 (467)
T PRK09556 331 IALALIIFTLGVYQHA-T-S---EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVG 405 (467)
T ss_pred HHHHHHHHHHHHHHhc-C-c---HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhh
Confidence 2222222111111111 1 1 123344555566543333333345666889876 45688988888775 433
Q ss_pred HHHHhhc-----------chhHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 401 VVFFIGP-----------YISLQAMLIVMVVGICVALVGILFLT 433 (445)
Q Consensus 401 ig~~i~~-----------~~~~~~~~~i~~~~~~~~~~~~~~~~ 433 (445)
+|++.++ ..++...+.++.++.+++++.++.+.
T Consensus 406 ~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 406 LGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566661 23577778888888888777776553
No 6
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.95 E-value=2.6e-25 Score=222.84 Aligned_cols=372 Identities=15% Similarity=0.062 Sum_probs=232.2
Q ss_pred cchhHHHHHHHHHHHH---HHhhhHhhhhhhccCCCCchHHHHHH----HHHHHHhhhhHHHHHHHhCcchhhhhhhHHH
Q 013318 27 TRDVHILSCAFLLIFL---AYGAAQNLETTVNTEGNLGTISLGIL----YTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (445)
Q Consensus 27 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~i~~~~~~g~~~~~~~----~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~ 99 (445)
.+++..+.++++..+. +........|.+.++.+.+....+.. .....+++++.|++.||+|||+++..+.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 3555555555544433 33444456677766667666544433 3455677889999999999999999998877
Q ss_pred HHHHHH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHH
Q 013318 100 WLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (445)
Q Consensus 100 ~~~~~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~ 178 (445)
.+.... ...+++..+++.|++.|++.+..++...+++.|+. ++++|++++|+++....+|..+++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 160 (406)
T PRK11551 91 GLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAV----------GPRLRGTAVSLMYCGVPFGGALASVIGV 160 (406)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665544 35788999999999999999999998889999987 4678999999999999999999988876
Q ss_pred HhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHH-HHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchh
Q 013318 179 AVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRM 257 (445)
Q Consensus 179 ~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (445)
.+... .+|+. .|.+.+++.++..++ ..++||+++.++++..+ + +..+.. +...+..+.++.
T Consensus 161 ~~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~--~~~~~~---~~~~~~~~~~~~ 222 (406)
T PRK11551 161 LAAGD-----------AAWRH-IFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAG-K--QRAPVL---RALFGEGRATAT 222 (406)
T ss_pred HHccc-----------cCHHH-HHHHHHHHHHHHHHHHHHhCCCChhHHhccCcc-h--hhhhhH---HHHhhhhhhhHH
Confidence 55322 35653 444444443333332 34567643321111000 0 001111 111111112222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHH
Q 013318 258 LLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW 337 (445)
Q Consensus 258 ~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~ 337 (445)
+.+...++...........+.|.+..+.+.+..+.+......+++.++++++.|++.||+++|+.+ ..+.+...+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~-~~~~~~~~~~~~- 300 (406)
T PRK11551 223 LLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV-LLIYAGILASLA- 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHH-
Confidence 222222222111111222344544444556666788888899999999999999999999988743 344443333322
Q ss_pred HHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcch-----hH
Q 013318 338 ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI-----SL 411 (445)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~~-----~~ 411 (445)
.....++ .....+..++.|++.+..++..+++..+.+|++. +++.|+++....+|..+++.+.+.+ +.
T Consensus 301 -~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~ 374 (406)
T PRK11551 301 -ALAAAPS-----FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRST 374 (406)
T ss_pred -HHHhcCc-----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCch
Confidence 1222322 1334456677788777778888899999998764 5578888888888888877766543 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 013318 412 QAMLIVMVVGICVALVGILFLTI 434 (445)
Q Consensus 412 ~~~~~i~~~~~~~~~~~~~~~~~ 434 (445)
...+++...+.+++.+..+++.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 375 VGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 44555555555666655555543
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=4.5e-25 Score=221.71 Aligned_cols=373 Identities=12% Similarity=0.021 Sum_probs=229.6
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHH
Q 013318 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (445)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~ 101 (445)
.++.++.+.+.+.+.+.++.+.....|.+.+|.+++... .+..+..+++++++.|++.||+|||+++..+.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 456666777777777777777777778887787777655 3445557788899999999999999999999988887
Q ss_pred HHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 102 FVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 102 ~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
..... +.+++..+++.|+++|++.+..+++..+++.++. |+++||+++|+++....+|.++|++++..+
T Consensus 86 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 155 (412)
T TIGR02332 86 ASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWF----------PAYFRARANALFMIAMPVTMALGLILSGYI 155 (412)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654 6789999999999999999999999888999997 467899999999999999999999988766
Q ss_pred hcCccccccccCCCCCcchhHHHHHHHHHHHHHH-HHHhccCCcccCc---cccccc-------ch-----hhh--hHHH
Q 013318 181 LKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKGE---KETADA-------SV-----NFY--SYLV 242 (445)
Q Consensus 181 ~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~-l~~~l~~~~~~~~---~~~~~~-------~~-----~~~--~~~~ 242 (445)
...... .+..+||. .|.+.++..++..+ ..+++||++++++ +++.+. +. .+. .+..
T Consensus 156 ~~~~~~-----~~~~gwr~-~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (412)
T TIGR02332 156 LALDGL-----MALKGWQW-LFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAA 229 (412)
T ss_pred HhCCCC-----CCccchhH-HHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhcccccccccccccccc
Confidence 532100 01247874 45555544443333 3356776543211 100000 00 000 0000
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhccccccc--ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCc
Q 013318 243 SLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSI 320 (445)
Q Consensus 243 ~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~--~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~ 320 (445)
...+..++.++++.++.....++...........++|.++.+. +.+....+...+...++..+|+++.|+++||+++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r 309 (412)
T TIGR02332 230 MPQRSMLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER 309 (412)
T ss_pred ccHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc
Confidence 0011223334456665544433333322222334556554332 23344677788899999999999999999999877
Q ss_pred cchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHH
Q 013318 321 TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASI 399 (445)
Q Consensus 321 ~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~ 399 (445)
+.......++..+.+. +....++. ...+....+.+++.....+.......+.+|++ ++.++|+.+....+|.
T Consensus 310 ~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~ 382 (412)
T TIGR02332 310 KHHTALPYLFAAAGWL--LASATDHN-----LIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGS 382 (412)
T ss_pred HHHHHHHHHHHHHHHH--HHHhcCCH-----HHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhh
Confidence 6433333333333322 11122221 11222222223333222233334445567665 4458899999988888
Q ss_pred HHHHHhhcc-----hhHHHHHHHHHHH
Q 013318 400 AVVFFIGPY-----ISLQAMLIVMVVG 421 (445)
Q Consensus 400 ~ig~~i~~~-----~~~~~~~~i~~~~ 421 (445)
++++.+.+. .++.+.+.+++++
T Consensus 383 ~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 383 ALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhhhhcccccccCCCCchhHHHHHHH
Confidence 877644432 2466666655554
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.95 E-value=1.2e-24 Score=220.28 Aligned_cols=370 Identities=11% Similarity=0.005 Sum_probs=221.5
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHH----HHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-h
Q 013318 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLG----ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L 107 (445)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~----~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~ 107 (445)
+.+++++.+..........|.+.++.+++....+ .....+++++++.|++.||+|+|+++.++.++.++..+.. .
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 107 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF 107 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 3344444444444555666777777777765433 3444667788999999999999999999998887766654 6
Q ss_pred hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCcccc
Q 013318 108 FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVC 187 (445)
Q Consensus 108 ~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~ 187 (445)
.+++..++..|++.|++.|..++...+++.+++ ++++||+++|+++...++|.++|+++...+...
T Consensus 108 ~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~----------~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~---- 173 (434)
T PRK11663 108 SSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWY----------SRTERGGWWAIWNTAHNVGGALIPLVVGAIALH---- 173 (434)
T ss_pred HhHHHHHHHHHHHHHHHHHccchHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----
Confidence 788889989999999999999998888999987 467899999999999999999999888766532
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHH-HHHHhccCCcccC---c-----ccccccchhhhhHHHHHHHHHH--Hhhccch
Q 013318 188 AALLGGSTSGTTLLFIVFLGVITLGT-ILMCFLRKEEDKG---E-----KETADASVNFYSYLVSLSKSIT--TLLADVR 256 (445)
Q Consensus 188 ~~~~~~~~~w~~~~~~i~~~l~~~~~-~l~~~l~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~ 256 (445)
.+||. .|.+.+++.++.. +..+++|++++.. + ++..+.++... +.+...++.. ..+|+|+
T Consensus 174 -------~gw~~-~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 244 (434)
T PRK11663 174 -------YGWRY-GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQE-GAGLSRKEILTKYVLLNPY 244 (434)
T ss_pred -------ccHHH-HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhcc-ccCCChhhhHHHHHhcChH
Confidence 35764 3444444433332 2334566543211 0 00000000000 0000111211 2567888
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCC--CccchHhHHHHHHHH
Q 013318 257 MLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP--SITFIVSGGAIAQVV 333 (445)
Q Consensus 257 ~~~l~~~~~~~g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g--~~~~~i~~g~~~~~~ 333 (445)
++.....++...........++|.++. +.+++..+.+.....++++..+++++.|+++||+. +|+.......+...+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~ 324 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILL 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHH
Confidence 776654433332222222344554442 23566667788888999999999999999999983 333221111111111
Q ss_pred HHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----
Q 013318 334 VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY---- 408 (445)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~---- 408 (445)
.... +.... ..+ ........+.+|++............++.+|++ ++.+.|+.+....+|.++++.+.+.
T Consensus 325 ~~~~-~~~~~-~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~ 399 (434)
T PRK11663 325 SVGS-LWLMP-FAS---YVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI 399 (434)
T ss_pred HHHH-HHHcc-ccc---HHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh
Confidence 1111 11122 111 122223333344433222333345677888765 4557899988888888776544433
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 013318 409 ISLQAMLIVMVVGICVALVGIL 430 (445)
Q Consensus 409 ~~~~~~~~i~~~~~~~~~~~~~ 430 (445)
.++...+++.+++.+++++...
T Consensus 400 ~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 400 WHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred cccHHHHHHHHHHHHHHHHHHH
Confidence 3566677777777666655444
No 9
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.95 E-value=1.2e-24 Score=220.03 Aligned_cols=371 Identities=12% Similarity=0.017 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHhhhHhhhhhhccCC---CCchH-------HHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHH
Q 013318 34 SCAFLLIFLAYGAAQNLETTVNTEG---NLGTI-------SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (445)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~i~~~~---~~g~~-------~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~ 103 (445)
.++.++.+.++.......|.+.+|. +.... ..+..+....+++++.|++.||+|||+++.++..++++.+
T Consensus 28 ~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 107 (432)
T PRK10406 28 SSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGS 107 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3445555666655555666665542 22222 1222333444889999999999999999999999988877
Q ss_pred HHh-hhcchh--------hHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhh
Q 013318 104 AAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (445)
Q Consensus 104 ~~~-~~~~~~--------~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~ 174 (445)
... +.|++. .+++.|+++|+|.|..++...++++|+. |+++||++.++.+.....|..+++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~----------p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 108 LVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVA----------VEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhC----------CCCcccHHHHHHHHHHHHHHHHHH
Confidence 664 556653 5788999999999999999999999997 578999999988877777777777
Q ss_pred HHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhcc
Q 013318 175 LITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 254 (445)
Q Consensus 175 li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (445)
++...+...... .....++||. .|.+.++..++...+...+||+++ .+.++ .++ + ++..+++|+
T Consensus 178 ~~~~~~~~~~~~---~~~~~~gWr~-~F~i~~~~~ll~~~~~~~~~e~~~---~~~~~--~~~----~---~~~~~l~~~ 241 (432)
T PRK10406 178 LVVVVLQQTLED---AELREWGWRI-PFALGAVLAVVALWLRRQLDETSQ---QETRA--LKE----A---GSLKGLWRN 241 (432)
T ss_pred HHHHHHHHhCCH---HHHhccchHH-HHHHHHHHHHHHHHHHhcCCCCch---HHHhh--hcc----c---ccHHHHHhh
Confidence 655443321100 0001257874 343333322222111112233211 11000 000 0 122345667
Q ss_pred chhHHHHHHHHHH-HHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHH
Q 013318 255 VRMLLIIPLFAYS-GLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV 332 (445)
Q Consensus 255 ~~~~~l~~~~~~~-g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~ 332 (445)
|+.+......+.. .........++|.++.+ .+++.++.+.......+...++.++.|+++||++||+.++ .+.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~ 320 (432)
T PRK10406 242 RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSML-CFGSLAA 320 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH-HHHHHHH
Confidence 7766544333222 12111123445554432 3455556777777778888888999999999999887543 3333222
Q ss_pred HHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHH-HHHHHHH----hh
Q 013318 333 VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCA-SIAVVFF----IG 406 (445)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~-g~~ig~~----i~ 406 (445)
+.............. ....+....+..++.+...+..+++.+|.+|++ |++++|+.+..... .....+. ++
T Consensus 321 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~ 397 (432)
T PRK10406 321 LFTVPILSALQNVSS---PYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK 397 (432)
T ss_pred HHHHHHHHHHHcCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH
Confidence 221111111111111 111111111122222333445667889999986 55678865544332 2222322 22
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 407 PYISLQAMLIVMVVGICVALVGILFLTI 434 (445)
Q Consensus 407 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 434 (445)
...++...++..++..+++.+..+.+++
T Consensus 398 ~~g~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 398 SIGMETAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HhCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 2222344455555666666666555544
No 10
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.95 E-value=4.7e-25 Score=217.56 Aligned_cols=346 Identities=13% Similarity=0.028 Sum_probs=221.5
Q ss_pred HhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHH
Q 013318 44 YGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPAS 118 (445)
Q Consensus 44 ~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r 118 (445)
..+...+.|.+.++.+++... .+..+..+++++++.|++.||+|||+++.++..+..+..... ..+++..+++.|
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY 98 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566777777777776654 344555667888999999999999999999998877766553 678999999999
Q ss_pred HHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcc
Q 013318 119 LYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGT 198 (445)
Q Consensus 119 ~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~ 198 (445)
++.|+|.+..++....++.++. |++|+++.++.....++|..+++.+...+... .+||
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~ 156 (377)
T TIGR00890 99 GLASAGVGIAYGIALNTAVKWF-----------PDKRGLASGIIIGGYGLGSFILSPLITSVINL-----------EGVP 156 (377)
T ss_pred HHHhHHHHHHHHhHHHHHHHHc-----------CcccHHHHHHHHHhcchhHhHHHHHHHHHHhc-----------ccHH
Confidence 9999999988877777777765 46899999999988888887665554433321 3576
Q ss_pred hhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhh
Q 013318 199 TLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAE 277 (445)
Q Consensus 199 ~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~ 277 (445)
. .|.+.+++.++..+.. +++++|+++++++..+.+ +.+ ++..+.+|+|+++.+...++............
T Consensus 157 ~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (377)
T TIGR00890 157 A-AFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVS-----VKD---YTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGL 227 (377)
T ss_pred H-HHHHHHHHHHHHHHHHHHheecCchhccccCcccc-----hhh---hhHHHHHcCccHHHHHHHHHHHhHHHHHHHHH
Confidence 3 4555555554443333 445554432211101100 001 12345677888766554433333322222222
Q ss_pred hcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHH
Q 013318 278 FTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 357 (445)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (445)
++.+..+.+.+.++.+......+++..+++++.|++.||++||+. +..+.++..++.+. ..+.++.. ....+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~ 301 (377)
T TIGR00890 228 YKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKT-MSIVFGISAVGMAA--MLFIPMLN---DVLFLAT 301 (377)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHH--HHHcccch---hHHHHHH
Confidence 232222233444567788889999999999999999999998874 44555555544332 22232211 1223344
Q ss_pred HHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHH
Q 013318 358 AALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVAL 426 (445)
Q Consensus 358 ~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~ 426 (445)
.++.|++.+...+..++++.|.+|++ +++++|+++....+|..+++.+.+. .++.+.+.+.+++.+++.
T Consensus 302 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 302 VALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 55667777766677778899999876 4567899888888888887765543 355666666665555543
No 11
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=5e-24 Score=213.49 Aligned_cols=376 Identities=12% Similarity=0.065 Sum_probs=224.6
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~ 100 (445)
.-+|++....++.++.........+..+.+.++.+.+.... +.....+.+++++.|++.||+||||++..+..+++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~ 89 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWC 89 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 34566666666666555554434444444444555555443 33444567788999999999999999999998776
Q ss_pred HHHHHh----h-hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhh-hhhh
Q 013318 101 LFVAAN----L-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ-FVGN 174 (445)
Q Consensus 101 ~~~~~~----~-~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~-~iG~ 174 (445)
+..+.. . .+++..++..|+++|+|.+...+....++.++. ++++||+++|++++..++|. .+|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~----------~~~~~g~~~g~~~~~~~~g~~~~g~ 159 (402)
T TIGR00897 90 VGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNT----------KQDNLSSAVGWFWAVYSIGIGVFGS 159 (402)
T ss_pred HHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 654432 1 357888888999999999887777666676665 46789999999999999886 5788
Q ss_pred HHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhc
Q 013318 175 LITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLA 253 (445)
Q Consensus 175 li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (445)
+++..+... .+|+...+ .......++.++. ++.++++++++++ ++ + +.++..+.....+|
T Consensus 160 ~~~~~l~~~-----------~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-----~~~~~~~~~~~~~~ 220 (402)
T TIGR00897 160 YYSSYAIPA-----------FGEMNTLW-SALAFVLTGGVIALFSNKDIFTPQHMQ-TR-E-----KFSELGKAATILFT 220 (402)
T ss_pred HHHHhcccc-----------cchHHHHH-HHHHHHHHHHHHHHhccCCCCCccccc-CC-c-----chhhHHHHHHHHHc
Confidence 877655432 23322111 1111222222333 3344432111111 00 0 01111122335678
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHH
Q 013318 254 DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV 333 (445)
Q Consensus 254 ~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~ 333 (445)
+|+++......+.......-...+.|.++.+.+++..+.+.+....+++..++++..|+++||++||+.....+.+...+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~ 300 (402)
T TIGR00897 221 NPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGI 300 (402)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Confidence 88887655443332222111123344333334555566777778889999999999999999999887543233222222
Q ss_pred H-HHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcc----
Q 013318 334 V-FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY---- 408 (445)
Q Consensus 334 ~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~---- 408 (445)
+ ..+.+.......+ ....++..+++|++.+...+ ..+.+.+..|++++.++|+++....+|..+++.+.+.
T Consensus 301 ~~~~l~~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 376 (402)
T TIGR00897 301 FTLALYYIPQHFGHS---FAVALIIAIALGIFLAGYVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF 376 (402)
T ss_pred HHHHHHHHHHccCCc---HHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2 1111111000111 23445567777887776654 3566777778777788999999999888777655533
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 409 ISLQAMLIVMVVGICVALVGILFLT 433 (445)
Q Consensus 409 ~~~~~~~~i~~~~~~~~~~~~~~~~ 433 (445)
.+....+.+.+++.+++.+...+++
T Consensus 377 ~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 377 FGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhc
Confidence 3455666777776666666665553
No 12
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.94 E-value=7.2e-24 Score=212.34 Aligned_cols=377 Identities=14% Similarity=0.086 Sum_probs=235.3
Q ss_pred ccccCcccccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCch---------HHHHHHHHHHHHhhhhHHHHHHHhCc
Q 013318 18 LQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT---------ISLGILYTSFTCFSLVASLVVRVLGS 88 (445)
Q Consensus 18 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~---------~~~~~~~~~~ai~~l~~g~l~dr~G~ 88 (445)
|++.|| +++...+.++.++...++.....+.|.+.++.+.+. ...++.+....+++++.|++.||+||
T Consensus 7 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 83 (408)
T PRK09874 7 DTPINW---KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGR 83 (408)
T ss_pred CCCCcH---HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCc
Confidence 444555 445556666666666665555555565554444332 12334445667788999999999999
Q ss_pred chhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHH
Q 013318 89 KNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA 167 (445)
Q Consensus 89 k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~ 167 (445)
|+++..+.....+..... ..++++.+++.|++.|++.+. .+....++.++. ++++|+++.|+......
T Consensus 84 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 152 (408)
T PRK09874 84 KIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGF-VPNANALIATQV----------PRNKSGWALGTLSTGGV 152 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhc----------CHhhhhHHHHHHHHHHH
Confidence 999999888776655543 567888899999999998654 455556666665 56789999999999999
Q ss_pred HhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHH
Q 013318 168 SHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSK 246 (445)
Q Consensus 168 lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (445)
.|..+|+.++..+... .+|+. .|.+..++.++..++. +++|++++..+++ + .. ..+
T Consensus 153 ~g~~~~~~~~~~l~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~----~~~ 209 (408)
T PRK09874 153 SGALLGPLAGGLLADS-----------YGLRP-VFFITASVLFLCFLVTLFCIRENFQPVSKK--E-----ML----HMR 209 (408)
T ss_pred HHHHHHHHHHHHHHHH-----------hCHHH-HHHHHHHHHHHHHHHHHHHhccCcccccch--h-----hh----HHH
Confidence 9999999888766532 24653 4555555444444433 4455543211111 0 00 112
Q ss_pred HHHHhhccchhHHHHH-HHHHHHHHHHHHHhhhcccccccccccc----hhHHHHHHHHHHHHHHHhhhhccccCCCCcc
Q 013318 247 SITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVTPALGVS----GVGGAMAVYGAFDAICSLAAGRLTTGLPSIT 321 (445)
Q Consensus 247 ~~~~~l~~~~~~~l~~-~~~~~g~~~~f~~~~~~~~~~~~~~~~~----~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~ 321 (445)
+..+.+|+++++.... ..+..........+.++.+..+...+.+ ..+.+....+++.+++++..|++.||++||+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~ 289 (408)
T PRK09874 210 EVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK 289 (408)
T ss_pred HHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 3345677887654322 1221111112222223322222111222 2355566778888899999999999999887
Q ss_pred chHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHH
Q 013318 322 FIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIA 400 (445)
Q Consensus 322 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ 400 (445)
. +..+..+..++.+ ...+.++ ....++..+++|++.+...+...+.+.+..|++ ++..++.++..+.+|..
T Consensus 290 ~-~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 361 (408)
T PRK09874 290 I-LITALIFSVLLLI--PMSFVQT-----PLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNV 361 (408)
T ss_pred h-HHHHHHHHHHHHH--HHHHhcc-----HHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHH
Confidence 4 4455544444332 2223322 234556677889999988888888888888765 45578888888888877
Q ss_pred HHHHhhcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013318 401 VVFFIGPY----ISLQAMLIVMVVGICVALVGILFLTIQVEKA 439 (445)
Q Consensus 401 ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 439 (445)
+|+.+.+. .++.+.+++.+++.+++.+...+..+|.+++
T Consensus 362 ~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~~~~ 404 (408)
T PRK09874 362 TGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRRIP 404 (408)
T ss_pred hhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 77666543 4677888888888888877776655554443
No 13
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=2.5e-24 Score=221.16 Aligned_cols=349 Identities=10% Similarity=0.020 Sum_probs=196.8
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhccCCC--C----ch---H-HHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGN--L----GT---I-SLGILYTSFTCFSLVASLVVRVLGSKNALILGTT 97 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~--~----g~---~-~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~ 97 (445)
+.++...++.++.+.++.......|.+.++.. . +. . ..+..+..+++++++.|++.||+|||+++.++.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 34445556666666565554444454433311 1 11 1 1355566788999999999999999999999999
Q ss_pred HHHHHHHHh-hhcchhh--------HHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHH
Q 013318 98 GYWLFVAAN-LFPSWYT--------MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS 168 (445)
Q Consensus 98 ~~~~~~~~~-~~~~~~~--------li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~l 168 (445)
++++.++.+ +.|++.. +++.|+++|+|.|..+++..++++|++ |+++||++.++......+
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~----------p~~~Rg~~~~~~~~~~~~ 165 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS----------PDRKRGFMGSWLDFGSIA 165 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhC----------CCCCCcHHHHHHHHHHHH
Confidence 998877765 6788754 788999999999999999999999998 468999999998888888
Q ss_pred hhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccC-ccccccc-chhh-hhHHHHHH
Q 013318 169 HQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG-EKETADA-SVNF-YSYLVSLS 245 (445)
Q Consensus 169 g~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~-~~~~~~~-~~~~-~~~~~~~~ 245 (445)
|..+|+.+...+...... .....++||. .|++..++.+++.++..++||+++.. +++..++ +.+. .+..+..
T Consensus 166 G~~lg~~~~~~~~~~~~~---~~~~~~gWR~-~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~- 240 (490)
T PRK10642 166 GFVLGAGVVVLISTIVGE---ANFLDWGWRI-PFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVS- 240 (490)
T ss_pred HHHHHHHHHHHHHHhcCH---HHhcCccHHH-HHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhccccccccccCC-
Confidence 888887665443321110 0001357874 34443333333333323455543211 0000000 0000 0000001
Q ss_pred HHHHHhhc-cchhHHHH-HHHHHHHHHHHHHHhhhccccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccc
Q 013318 246 KSITTLLA-DVRMLLII-PLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITF 322 (445)
Q Consensus 246 ~~~~~~l~-~~~~~~l~-~~~~~~g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~ 322 (445)
..+.++ +++.+... ...+...........+.|.++. ..+++....++......++..++.++.|+++||+|||+.
T Consensus 241 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 318 (490)
T PRK10642 241 --FKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPF 318 (490)
T ss_pred --HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 112222 22322222 1122222211112234444332 223444455666677788889999999999999999874
Q ss_pred hHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHH-HHHHHHHH
Q 013318 323 IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQCAS 398 (445)
Q Consensus 323 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~-~~~~~~~g 398 (445)
+ ..+.++..+.....+.... +.. ....++..++.|++.+...+....++.+++|++.+ ++.|. ++.....|
T Consensus 319 ~-~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g 391 (490)
T PRK10642 319 V-ILGSVALFVLAIPAFILIN-SNV---IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA 391 (490)
T ss_pred H-HHHHHHHHHHHHHHHHHHh-CCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH
Confidence 3 4444332221111111111 111 13344445556666555666667788899998755 46774 56544443
No 14
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.94 E-value=1.8e-24 Score=221.21 Aligned_cols=375 Identities=14% Similarity=0.049 Sum_probs=218.8
Q ss_pred HHHHHHHHHHhhhHhhhhhhccCCCCchHHHH----HHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhc
Q 013318 35 CAFLLIFLAYGAAQNLETTVNTEGNLGTISLG----ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP 109 (445)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~----~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~ 109 (445)
+.+++.+..........|.+.++.+++....+ .....+.+++++.|++.||+|||+++..+.+++++..+.. ..+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~ 122 (476)
T PLN00028 43 ISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS 122 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc
Confidence 33444444444555666777777777654433 3344566788999999999999999999888877766543 577
Q ss_pred chhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCcccccc
Q 013318 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAA 189 (445)
Q Consensus 110 ~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~ 189 (445)
++..+++.|+++|++.+...+ ...+++++. ++++||+++|+.....++|..+|+.+...+.......+
T Consensus 123 s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~----------~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~- 190 (476)
T PLN00028 123 SATGFIAVRFFIGFSLATFVS-CQYWMSTMF----------NGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG- 190 (476)
T ss_pred CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhc----------ChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 888888899999999886543 345677776 56789999999987777888877766544322110000
Q ss_pred ccCCCCCcchhHHHHHHHHHHHHHHHHHhcc-CCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 013318 190 LLGGSTSGTTLLFIVFLGVITLGTILMCFLR-KEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSG 268 (445)
Q Consensus 190 ~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g 268 (445)
.....+||. .|.+.+++.++..++.++++ ++++.+.++..++...++.+.. +...+.+++++++.+...++...
T Consensus 191 -~~~~~gWr~-~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 265 (476)
T PLN00028 191 -APSFTAWRI-AFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFS---KVLRYGVTNYRTWILALTYGYSF 265 (476)
T ss_pred -CcchhhhHH-HHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHH---HHHHHHHcCchhHHHHHHHHHHH
Confidence 001136864 45555555554444444443 3221111110000000001111 22345678888776554333221
Q ss_pred HHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCcc----c--hHhHHHHHHHHHHHHHHhh
Q 013318 269 LQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSIT----F--IVSGGAIAQVVVFLWILIN 341 (445)
Q Consensus 269 ~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~----~--~i~~g~~~~~~~~~~~~~~ 341 (445)
.......++.+.++.+ .+++....+.+.+.++++..+++++.|+++||++||+ + +.....++..++.+ ...
T Consensus 266 ~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~--~~~ 343 (476)
T PLN00028 266 GVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCI--WLG 343 (476)
T ss_pred HHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHH--Hhc
Confidence 1111112334444332 3566667888888999999999999999999997652 1 11122222222211 122
Q ss_pred ccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhc---chhHHHHHHHH
Q 013318 342 YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP---YISLQAMLIVM 418 (445)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~---~~~~~~~~~i~ 418 (445)
..++ .....+..++++++.+...+..+++..++.|++++.++|+.+....+|..++..+-. ..++...+++.
T Consensus 344 ~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~ 418 (476)
T PLN00028 344 RANS-----LGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLM 418 (476)
T ss_pred ccch-----HHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHH
Confidence 2222 122233334445544444444555666777777777888887777777766543332 23577888888
Q ss_pred HHHHHHHHHHHHHHH
Q 013318 419 VVGICVALVGILFLT 433 (445)
Q Consensus 419 ~~~~~~~~~~~~~~~ 433 (445)
+++.+++.+..+++.
T Consensus 419 ~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 419 GVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHHHHHhee
Confidence 888888888777764
No 15
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=4.9e-24 Score=212.87 Aligned_cols=341 Identities=9% Similarity=-0.024 Sum_probs=217.3
Q ss_pred hhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHH
Q 013318 46 AAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLY 120 (445)
Q Consensus 46 ~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l 120 (445)
....+.|.+.+|.+++... .+..+..+++++++.|++.||+|||+++..+..++++..+.. +.+++..+++.|++
T Consensus 27 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l 106 (393)
T PRK09705 27 SVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALL 106 (393)
T ss_pred ccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHH
Confidence 3446677777777777654 444555778889999999999999999999999998877765 78999999999999
Q ss_pred hhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchh
Q 013318 121 LGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTL 200 (445)
Q Consensus 121 ~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~ 200 (445)
+|+|.+..++....++.++. |+||++++|++.+....|..+|++++..+..+. .+||..
T Consensus 107 ~Gig~~~~~~~~~~~~~~~~-----------~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~----------~~w~~~ 165 (393)
T PRK09705 107 GGVGIGIIQAVMPSVIKRRF-----------QQRTPLVMGLWSAALMGGGGLGAAITPWLVQHS----------ETWYQT 165 (393)
T ss_pred HHhHHHHHhhhhhHHHHHHc-----------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCHHHH
Confidence 99999999998888887775 478999999999988899999998887665432 257643
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcc
Q 013318 201 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK 280 (445)
Q Consensus 201 ~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~ 280 (445)
+.++.+..++..+..+..++++++++++ ++ .+ ..+.+|+++.+.+...++...........+.+.
T Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~-------~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~ 230 (393)
T PRK09705 166 -LAWWALPAVVALFAWWWQSAREVASSHK--TT-----TT-------PVRVVFTPRAWTLGVYFGLINGGYASLIAWLPA 230 (393)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCCCccccC--CC-----cC-------CcccccCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233333222222222222211111100 00 00 123456777665544333333222222344555
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHH
Q 013318 281 EIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAAL 360 (445)
Q Consensus 281 ~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 360 (445)
++.+.+++..+.|.....++++.++++++.|++.||.++|+. +..+..+..++... +.+.+... ... ...+
T Consensus 231 ~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~-~~~~~~l~~~~~~~--~~~~~~~~----~~~--~~~l 301 (393)
T PRK09705 231 FYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKL-LMLALVLQLVGFCG--FIWLPLQL----PVL--WAMV 301 (393)
T ss_pred HHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHH-HHHHHHHHHHHHHH--HHHccchH----HHH--HHHH
Confidence 544456666678889999999999999999999999998864 44555554444321 12222211 111 2334
Q ss_pred HhhhhhhhhhhhhHHHHhhcc-CC-chhhHHHHHHHHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHHHHHHHHHH
Q 013318 361 LGIGDGVLNTQLSALLGILFK-HD-TEGAFAQLKVWQCASIAVVFFIGPY-----ISLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 361 ~G~~~~~~~~~~~~~l~~~~~-~~-~~~a~~~~~~~~~~g~~ig~~i~~~-----~~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
.|++.+...+.......+..+ ++ +++++|..+....++..+++.+.++ .++...+++.++++++..++...
T Consensus 302 ~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK09705 302 CGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLR 379 (393)
T ss_pred HHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 577766666766666667664 33 3456787777777766665544432 34556666666666655555433
No 16
>PRK09952 shikimate transporter; Provisional
Probab=99.94 E-value=6.7e-24 Score=214.89 Aligned_cols=382 Identities=13% Similarity=0.064 Sum_probs=210.1
Q ss_pred cchhHHHHHHHHHHHHHHhhhHhhhhh-hccCC--CCc----hHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhh
Q 013318 27 TRDVHILSCAFLLIFLAYGAAQNLETT-VNTEG--NLG----TIS----LGILYTSFTCFSLVASLVVRVLGSKNALILG 95 (445)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~-i~~~~--~~g----~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g 95 (445)
++-++...++.++.+.++.....+.+. +.++. +.+ ... .++-+....+++++.|++.||+|||+++.++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~ 100 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLT 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHH
Confidence 344455555666666665544444432 22111 222 211 1233344567888999999999999999999
Q ss_pred hHHHHHHHHHh-hhcchh--------hHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHH
Q 013318 96 TTGYWLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMF 166 (445)
Q Consensus 96 ~~~~~~~~~~~-~~~~~~--------~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~ 166 (445)
.+++++.++.. +.+++. .++..|+++|++.|..+++..+++.|+. |+++||+..+....+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~----------p~~~rg~~~~~~~~g~ 170 (438)
T PRK09952 101 VWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA----------PKNKKAFYSSGVQVGY 170 (438)
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC----------CCCCCcHHHHHHHHHH
Confidence 99888877764 677765 4778999999999999999999999997 4678999999988888
Q ss_pred HHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHH
Q 013318 167 ASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSK 246 (445)
Q Consensus 167 ~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (445)
.+|.++|+.+...+.......+ ...++||. .|.+.++..++...+-..+||+++..+++.++++.+++.+.
T Consensus 171 ~~G~~l~~~~~~~l~~~~~~~~---~~~~gWr~-~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~~~~~~~----- 241 (438)
T PRK09952 171 GVGLLLSTGLVSLISMMTTDEQ---FLSWGWRI-PFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAKKRIPV----- 241 (438)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH---hhccChHH-HHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccccccCCH-----
Confidence 8888888766554432211000 01257874 34433332222111111233322110000000000000011
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHH-HHhhhccccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchH
Q 013318 247 SITTLLADVRMLLIIPLFAYSGLQQAF-VWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIV 324 (445)
Q Consensus 247 ~~~~~l~~~~~~~l~~~~~~~g~~~~f-~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i 324 (445)
....+|+|+.+..............+ ..++.+.+.. ..+++.+....+....++...++.++.|+++||++||+.+
T Consensus 242 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~- 319 (438)
T PRK09952 242 -IEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVY- 319 (438)
T ss_pred -HHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-
Confidence 11244566665443322211111111 1223333221 1233333333444566777788889999999999998744
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHH-HHHHHHHHHHHH
Q 013318 325 SGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQCASIAVV 402 (445)
Q Consensus 325 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~-~~~~~~~g~~ig 402 (445)
..+.++..++............. ........++.+++.+...+..++++.|.+|.+.+ ++.++ ++....+|..++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~ 396 (438)
T PRK09952 320 ITGALIGTLSAFPFFMALEAQSI---FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFT 396 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHH
Confidence 45544433332111111111111 12233445556777777777888999999998754 45564 445454565555
Q ss_pred HHhhcch------hHHHHHHHHHHHHHHHHHHHHHH
Q 013318 403 FFIGPYI------SLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 403 ~~i~~~~------~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
+.+.+.+ ++...+....++.+++.+..+.+
T Consensus 397 p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 397 PFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 4443321 34455666666666776666544
No 17
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.94 E-value=1.8e-23 Score=208.82 Aligned_cols=338 Identities=11% Similarity=0.012 Sum_probs=213.2
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHH
Q 013318 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (445)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~ 101 (445)
.++..+.+..+..+..........+.|.+.++.+.+.... +.......+++++.|++.||+|||+++..+.++..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 3444444444433333332233445666766666665443 344456677889999999999999999999998877
Q ss_pred HHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 102 FVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 102 ~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
..... ..++++.+++.|+++|++.+..++...+++.++. |+++|+++.++.+...++|..+|++++..+
T Consensus 98 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~----------~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l 167 (394)
T PRK10213 98 SCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLV----------PPRTVPKALSVIFGAVSIALVIAAPLGSFL 167 (394)
T ss_pred HHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHc----------CHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55543 5788999999999999999999999999999987 467899999999999999999999999877
Q ss_pred hcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHH
Q 013318 181 LKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL 259 (445)
Q Consensus 181 ~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 259 (445)
... .+||. .|.+.+++.++..+.. ..+|++++ +++ + . ++ +..+.+|+|+++.
T Consensus 168 ~~~-----------~gw~~-~f~~~~~l~~~~~l~~~~~~p~~~~--~~~--~----~----~~---~~~~~l~~~~~~~ 220 (394)
T PRK10213 168 GEL-----------IGWRN-VFNAAAVMGVLCIFWIIKSLPSLPG--EPS--H----Q----KQ---NTFRLLQRPGVMA 220 (394)
T ss_pred Hhh-----------cCHHH-HHHHHHHHHHHHHHHHHHHCCCCCc--ccc--c----c----hh---HHHHHhcCHHHHH
Confidence 533 36764 4444444433332222 22343211 110 0 0 01 1235677888765
Q ss_pred HHHHHHHHHHHHHHHHhhhcccc-cccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHH
Q 013318 260 IIPLFAYSGLQQAFVWAEFTKEI-VTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI 338 (445)
Q Consensus 260 l~~~~~~~g~~~~f~~~~~~~~~-~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~ 338 (445)
.....+............+++.+ .+.+++.+..+..+..++++..+++++.|++.||.+ |+.++..+.+...+.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~-- 297 (394)
T PRK10213 221 GMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALV-- 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHH--
Confidence 54332221111111122332322 234566677889899999999999999999999954 33233222222222222
Q ss_pred HhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcc
Q 013318 339 LINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY 408 (445)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~ 408 (445)
+..+.++ ........+++|++.+..++..++.+.+..|++++.+.+.+....++|..+|..+.+.
T Consensus 298 l~~~~~~-----~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~ 362 (394)
T PRK10213 298 LTLWGSD-----KIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGY 362 (394)
T ss_pred HHHHhhh-----HHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122322 2345567788899998888888888888888765555555555555666555555443
No 18
>PRK03699 putative transporter; Provisional
Probab=99.94 E-value=1.3e-23 Score=210.00 Aligned_cols=358 Identities=14% Similarity=0.006 Sum_probs=220.0
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~ 103 (445)
|-++...+++++..........+.|++.++.+++.... +..+..+.+++++.|++.||+|||+++.++.++..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 44444445555444444455566677777777765543 33445667888999999999999999999988777665
Q ss_pred HHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhc
Q 013318 104 AAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (445)
Q Consensus 104 ~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~ 182 (445)
... ..+++..+++.|+++|++.+..++....++.++. |+++|+++++..+....+|..++|++...+..
T Consensus 87 ~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (394)
T PRK03699 87 AGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVY----------EGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA 156 (394)
T ss_pred HHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhc----------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 543 5688888999999999999988888788888876 46789999998888888888888877665542
Q ss_pred CccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHH
Q 013318 183 DDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP 262 (445)
Q Consensus 183 ~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 262 (445)
.. .+||. .|.+.+++.++..++.++.+.|+.+++++ +++ +.. . +...+++++....
T Consensus 157 ~~----------~gw~~-~f~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~---~~~----~----~~~~~~~~~~~~~ 212 (394)
T PRK03699 157 RS----------IEWYW-VYACIGLVYVAIFILTLFSEFPALGKHAP--KAD---KPV----A----KEKWGIGVLFLAI 212 (394)
T ss_pred cc----------ccHHH-HHHHHHHHHHHHHHHHHhcCCccccccCc--ccc---Ccc----c----cccCChHHHHHHH
Confidence 21 36764 34444444333333333333232111111 000 000 0 1112344444333
Q ss_pred HHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhh
Q 013318 263 LFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN 341 (445)
Q Consensus 263 ~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~ 341 (445)
..+...........+.|.++.+ .+++.++.+.+...++++..+++++.|++.||+++|+.+ .....+..+.+. ...
T Consensus 213 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l-~~~~~~~~~~~~--~~~ 289 (394)
T PRK03699 213 AALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRIL-TVLAGLALVLMY--LFV 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHH-HHHHHHHHHHHH--HHH
Confidence 2222222111122445544433 356666788888899999999999999999999988744 343333333322 122
Q ss_pred ccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHH
Q 013318 342 YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIV 417 (445)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i 417 (445)
..++. ....+..+++|++.+...+...+...+..|++++...+.......+|..+++.+.++ .++...+++
T Consensus 290 ~~~~~-----~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~ 364 (394)
T PRK03699 290 NTDDP-----SHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLT 364 (394)
T ss_pred HcCCc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhh
Confidence 23322 233445667788777777777777778777666556676666666777776655533 355566665
Q ss_pred HHHHHHHHHH
Q 013318 418 MVVGICVALV 427 (445)
Q Consensus 418 ~~~~~~~~~~ 427 (445)
.+++++++.+
T Consensus 365 ~~~~~~~~~~ 374 (394)
T PRK03699 365 ANGLYAVVFV 374 (394)
T ss_pred hHHHHHHHHH
Confidence 5555555443
No 19
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.94 E-value=9.5e-24 Score=209.93 Aligned_cols=354 Identities=16% Similarity=0.161 Sum_probs=224.1
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHH----HHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGI----LYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~----~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~ 100 (445)
+.+|+++.+.++.++.-.+......+.|.+.++.+.+....+. ......+++++.|++.||+|||+++..+.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 3 TYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466778887777776666666666777777777776654444 444556778899999999999999999998877
Q ss_pred HHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHH
Q 013318 101 LFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (445)
Q Consensus 101 ~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~ 179 (445)
+..... ..+++..+++.|+++|++.+..++...+.+.+.. ++++|++++|++....++|..+|++++..
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSG----------TSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 655543 6789999999999999999998887666666654 46789999999999999999999988876
Q ss_pred hhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHH
Q 013318 180 VLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL 259 (445)
Q Consensus 180 l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 259 (445)
+..... | ...+. ...+ ....+..++.+.+++.++++ +.. +..+.+|+|+++.
T Consensus 153 l~~~~~-----------~-~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~-------~~~~~~~~~~~~~ 204 (381)
T PRK03633 153 VSTELM-----------S-VLPWV-TGLV-LAAILPLLFTRILNQQAENH-------DST-------SIWPMLKLRQARL 204 (381)
T ss_pred cccccc-----------c-hHHHH-HHHH-HHHHHHHHHhcccCCCCCCC-------CCC-------CHHHHHHhcchHH
Confidence 543211 1 11111 1111 11222223333222111110 001 1123456777664
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHH
Q 013318 260 IIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL 339 (445)
Q Consensus 260 l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~ 339 (445)
.....+..+.......+..|.+..+.+.+.+.+|.+.....++.+++++..|++.||+++|+ ++..+..+..++... .
T Consensus 205 ~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~-~l~~~~~~~~~~~~~-~ 282 (381)
T PRK03633 205 GVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL-VLRVQVFVVILGSIA-M 282 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH-HHHHHHHHHHHHHHH-H
Confidence 43323333332222223344444344566667888888899999999999999999999886 445555554444321 1
Q ss_pred hhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcch----hHHHH
Q 013318 340 INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI----SLQAM 414 (445)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~~----~~~~~ 414 (445)
.. . ........++|++.....|...+...+..|+++ +.+.+.++...++|..+|+.+.+.. +..+.
T Consensus 283 --~~-~------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~ 353 (381)
T PRK03633 283 --LS-Q------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLL 353 (381)
T ss_pred --hh-h------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHH
Confidence 11 1 122234456677666677888888888887654 4456676677777777776665433 45566
Q ss_pred HHHHHHHHHHHHH
Q 013318 415 LIVMVVGICVALV 427 (445)
Q Consensus 415 ~~i~~~~~~~~~~ 427 (445)
+.+.+.+.++..+
T Consensus 354 f~~~~~~~l~~~~ 366 (381)
T PRK03633 354 FIMIASVSFIYLL 366 (381)
T ss_pred HHHHHHHHHHHHH
Confidence 6666555554443
No 20
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2.7e-24 Score=205.60 Aligned_cols=376 Identities=10% Similarity=0.016 Sum_probs=247.1
Q ss_pred hHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH
Q 013318 30 VHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA 105 (445)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~ 105 (445)
++...++...+|..+.+....+|.+.++.+++... .+.++.+|+++.++.|.++||.++|+.+..|+++.++..+.
T Consensus 31 f~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil 110 (448)
T COG2271 31 FLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNIL 110 (448)
T ss_pred HHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHH
Confidence 34555666777777777777888888777677654 46677889999999999999999999999999888776665
Q ss_pred h-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHH--HHhhc
Q 013318 106 N-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT--LAVLK 182 (445)
Q Consensus 106 ~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~--~~l~~ 182 (445)
+ +.++...+.+.=++.|.-+|.-||.....+++|. +++|||+..++.+...++|..+-+++. ..+..
T Consensus 111 ~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wf----------sr~eRG~~~siWn~shNiGGal~~~~~~la~~~~ 180 (448)
T COG2271 111 FGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWF----------SRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF 180 (448)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHc----------CccccCceEEEehhhhhcccchHHHHHHHHHHHh
Confidence 4 6789888888889999999999999999999998 468999999999999999998777666 33332
Q ss_pred CccccccccCCCCCcchhHHHHHHHHHH-HHHHHHHhccCCccc---Cc-----cccccc--chhhh--hHHHHHHHHHH
Q 013318 183 DDKVCAALLGGSTSGTTLLFIVFLGVIT-LGTILMCFLRKEEDK---GE-----KETADA--SVNFY--SYLVSLSKSIT 249 (445)
Q Consensus 183 ~~~~~~~~~~~~~~w~~~~~~i~~~l~~-~~~~l~~~l~~~~~~---~~-----~~~~~~--~~~~~--~~~~~~~~~~~ 249 (445)
+ .+||. .|++.+++++ +++++.+..+|+++. ++ .|..+. ++++. -+.++.+.+
T Consensus 181 ~-----------~~w~~-~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~-- 246 (448)
T COG2271 181 H-----------GGWRA-AFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVK-- 246 (448)
T ss_pred c-----------cchhH-HHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHH--
Confidence 2 25765 4555555554 444455567764432 11 111111 11111 122333322
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCC--CCccchHhH
Q 013318 250 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL--PSITFIVSG 326 (445)
Q Consensus 250 ~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~--g~~~~~i~~ 326 (445)
..+|||..|++....++.-+...-...|-|.++.+ ++++..+.......+-++.+.|+++.||++||+ |||.+..++
T Consensus 247 YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i 326 (448)
T COG2271 247 YVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALI 326 (448)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHH
Confidence 36899999988775555444332222333333333 567777888888999999999999999999996 567654434
Q ss_pred HHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHH-HHHHHHH
Q 013318 327 GAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCA-SIAVVFF 404 (445)
Q Consensus 327 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~-g~~ig~~ 404 (445)
.++...++++ ..-..++.+ +.+..++++..|+....-+-.+-....|..|++. ++|.|...++..+ |++.+-.
T Consensus 327 ~~~~i~~~~~--~~w~~~~~~---~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~ 401 (448)
T COG2271 327 FMLLITASLV--LYWLAPNGS---YLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGL 401 (448)
T ss_pred HHHHHHHHHH--HHHcCCCcc---HHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCC
Confidence 3333333332 222233322 2445556666666544444444455667788774 4578888888888 6655422
Q ss_pred hhcc----hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 405 IGPY----ISLQAMLIVMVVGICVALVGILFLTI 434 (445)
Q Consensus 405 i~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~ 434 (445)
.-++ .+....++++.+.++++.++++...+
T Consensus 402 ~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 402 PLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred cceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 2221 35555676666666666666655544
No 21
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.94 E-value=8.3e-24 Score=213.35 Aligned_cols=352 Identities=10% Similarity=0.052 Sum_probs=208.5
Q ss_pred cchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHH
Q 013318 27 TRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (445)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~ 102 (445)
+++.....++.++....+.......|.+.++.+++... .+.......+++++.|++.||+|||+++.++.+..++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 96 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVG 96 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 34555555555555555555555666666666665443 34455566788899999999999999999999888776
Q ss_pred HHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 103 ~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
.+.. ..+++..+++.|+++|+|.+..++....++.++. ++++|+++.|++.....+|.++++.+...+.
T Consensus 97 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 97 TGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESW----------PKHLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhC----------CHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 6654 6788999999999999999999999889999987 4678999999999988999988887766554
Q ss_pred cCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHH
Q 013318 182 KDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLII 261 (445)
Q Consensus 182 ~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 261 (445)
.. .+||.. |.+.....++...+....|++++.++++.+++++..+...+.......+.+|+|++....
T Consensus 167 ~~-----------~~w~~~-f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (426)
T PRK12307 167 EA-----------YGWRAA-FFVGLLPVLLVIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTL 234 (426)
T ss_pred cc-----------CCHHHH-HHHHHHHHHHHHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHH
Confidence 22 367643 332211111111111112222110000000000000001111111334566777765433
Q ss_pred HHHHH-HHHHHH-H-HHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHH
Q 013318 262 PLFAY-SGLQQA-F-VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI 338 (445)
Q Consensus 262 ~~~~~-~g~~~~-f-~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~ 338 (445)
..+.. ...... + ....++.++.+.+.+....+...+..+++.++++++.|++.||++||+. +..+.++..+.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~~- 312 (426)
T PRK12307 235 CVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKT-FSIGLLMSFLFIFP- 312 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHH-
Confidence 22111 111111 1 1234444443345555667888888999999999999999999998874 45555554443321
Q ss_pred HhhccCCCCccchhHHHHHHHHHhh--hhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc
Q 013318 339 LINYSVTSGVLGTLYPLIMAALLGI--GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 408 (445)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~G~--~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~ 408 (445)
+ ...++.. . ..+...++|. ......+..+.++.+.+|++ ++.+.|+.+....+|..+++.+.+.
T Consensus 313 ~-~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~ 379 (426)
T PRK12307 313 L-FRIPQDN----Y-LLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATW 379 (426)
T ss_pred H-HHHcccc----H-HHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHH
Confidence 1 1122211 1 1122223333 22233455667888999976 4557887777777777777666543
No 22
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.93 E-value=5e-23 Score=204.86 Aligned_cols=361 Identities=12% Similarity=0.040 Sum_probs=216.7
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~ 103 (445)
++++.+.+..++............|.+.+|.+.+... .+.....+.+++++.|++.||+|||+++..+..+.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 4555555665555555445555666666666655433 455566778899999999999999999999998887766
Q ss_pred HHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhc
Q 013318 104 AAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (445)
Q Consensus 104 ~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~ 182 (445)
+.. ..++++.+++.|++.|++.+...+....++.++. ++++|++++|++.....+|..+|++++..+..
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKII----------KPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC----------ChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 554 6789999999999999999988887777787776 46789999999999899999999988776643
Q ss_pred CccccccccCCCCCcchhHHHHHHHHHHHHHHH-HHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHH
Q 013318 183 DDKVCAALLGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLII 261 (445)
Q Consensus 183 ~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 261 (445)
. .+||. .|.+.+++..+..+. ..++|++++++++ + .++ ..+.+|+++.+...
T Consensus 153 ~-----------~gwr~-~f~~~~~~~~~~~~~~~~~lp~~~~~~~~-----~------~~~----~~~~~~~~~~~~~~ 205 (382)
T PRK10091 153 E-----------FSWRY-TFLLIAVFNIAVLASIYFWVPDIRDEAKG-----G------LRE----QFHFLRSPAPWLIF 205 (382)
T ss_pred h-----------ccHHH-HHHHHHHHHHHHHHHHHHhCCCCCccccc-----C------HHH----HHHHhcChHHHHHH
Confidence 2 35764 455544444433332 2345553221110 0 011 12456777766543
Q ss_pred HHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHh
Q 013318 262 PLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI 340 (445)
Q Consensus 262 ~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~ 340 (445)
...+........+.+..++++.+ .+.+.++.++.....+++.++++++.|++.||+++|+. +..+..+..++.+. +.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~-~~~~~~~~~i~~~~-~~ 283 (382)
T PRK10091 206 AATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI-AAVTDFIIVLALLM-LF 283 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH-HHHHHHHHHHHHHH-HH
Confidence 32222111111112223333322 35566678888899999999999999999999998774 34555444444321 11
Q ss_pred hccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHH-----hhcchhHHHHH
Q 013318 341 NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFF-----IGPYISLQAML 415 (445)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~-----i~~~~~~~~~~ 415 (445)
...++ .....++.++.+.+.....+.......+..++++..+.+..+....+|.++|+. ++...++.+.+
T Consensus 284 ~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~ 358 (382)
T PRK10091 284 FFGGM-----KTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTLGLAYNYVA 358 (382)
T ss_pred HHHhh-----HHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHcccCcchHH
Confidence 12222 123333444455554444443333333333333222222234444555555443 33345677777
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013318 416 IVMVVGICVALVGILFL 432 (445)
Q Consensus 416 ~i~~~~~~~~~~~~~~~ 432 (445)
.+.++++.++.......
T Consensus 359 ~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 359 LPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77666555555444433
No 23
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.93 E-value=1.3e-23 Score=213.72 Aligned_cols=355 Identities=9% Similarity=-0.051 Sum_probs=205.5
Q ss_pred hHhhhhhhccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hh----cchhhHHhH
Q 013318 47 AQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF----PSWYTMVPA 117 (445)
Q Consensus 47 ~~~~~~~i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~----~~~~~li~~ 117 (445)
.....|.+.++ +++.... +.....+++++++.|++.||+|+|+++.++.++..+..+.. +. +++..+++.
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 126 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL 126 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 34455666655 6665443 44455667889999999999999999999988776655443 22 367778889
Q ss_pred HHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhh-hhhHHHHHhhcCccccccccCCCCC
Q 013318 118 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQF-VGNLITLAVLKDDKVCAALLGGSTS 196 (445)
Q Consensus 118 r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~-iG~li~~~l~~~~~~~~~~~~~~~~ 196 (445)
|++.|++.+..++...+.+.++. ++++||+++|+++...++|.. .|+++...+... .+
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----------~g 185 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWW----------SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-----------ND 185 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhC----------ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-----------cc
Confidence 99999999998887777788876 467899999999888888864 455543333211 25
Q ss_pred cchhHHHHHHHHHHHHHH-HHHhccCCcccC---cc-cc-c---cc---chhhhhHHHHHHHHHHHhhccchhHHHHHHH
Q 013318 197 GTTLLFIVFLGVITLGTI-LMCFLRKEEDKG---EK-ET-A---DA---SVNFYSYLVSLSKSITTLLADVRMLLIIPLF 264 (445)
Q Consensus 197 w~~~~~~i~~~l~~~~~~-l~~~l~~~~~~~---~~-~~-~---~~---~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 264 (445)
||. .|.+.+++.++..+ ..+++||++++. ++ +. + +. +..++.+.++.++ ...+|+|.++......
T Consensus 186 w~~-~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 262 (452)
T PRK11273 186 WHA-ALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFM--QYVLPNKLLWYIAIAN 262 (452)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHH--HHHHcChHHHHHHHHH
Confidence 764 45555554444333 345667643321 00 00 0 00 0000001111111 2356788887655444
Q ss_pred HHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCC--CccchHhHHHHHHHHHHHHHHhh
Q 013318 265 AYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP--SITFIVSGGAIAQVVVFLWILIN 341 (445)
Q Consensus 265 ~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g--~~~~~i~~g~~~~~~~~~~~~~~ 341 (445)
++..........++|.++.+ .+++.++.+.....+.++.++++++.|+++||++ ||.........+..+... ...
T Consensus 263 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~--~~~ 340 (452)
T PRK11273 263 VFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATI--VYW 340 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHH--HHH
Confidence 33332222223455655543 3566677888888889999999999999999984 443222122222222221 111
Q ss_pred ccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHH-HHHhhc----chhHHHHH
Q 013318 342 YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAV-VFFIGP----YISLQAML 415 (445)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~i-g~~i~~----~~~~~~~~ 415 (445)
..+... .....+..++.|...........++..+.+|++ ++++.|+.+....+|..+ ++.+.+ ..++...+
T Consensus 341 ~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f 417 (452)
T PRK11273 341 LNPAGN---PTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF 417 (452)
T ss_pred HhcccC---hHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHH
Confidence 111111 122223333344432222233345667888876 556888888777666543 444432 34567777
Q ss_pred HHHHHHHHHHHHHHHH
Q 013318 416 IVMVVGICVALVGILF 431 (445)
Q Consensus 416 ~i~~~~~~~~~~~~~~ 431 (445)
.++.++++++++....
T Consensus 418 ~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 418 MVMIGGSILAVILLIV 433 (452)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777766666655543
No 24
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.93 E-value=4.3e-23 Score=204.79 Aligned_cols=344 Identities=14% Similarity=0.042 Sum_probs=217.0
Q ss_pred cchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHH
Q 013318 27 TRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (445)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~ 102 (445)
++.++.+++..+....+........|.+.++.+.+... .+.......+++++.|++.||+|||+++..+..+..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 33444444444443444444445556666666665543 33444456778889999999999999999998877766
Q ss_pred HHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 103 ~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
.... ..+++..+++.|++.|++.+...+...+++.|+. |+++|++.+|+......+|..+|+.++..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 153 (385)
T TIGR00710 84 SLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIY----------PGEELSRIYSILMPVLALAPAVAPLLGGYIL 153 (385)
T ss_pred HHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhc----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544 5788888999999999999999999999999887 4678999999999999999999998887665
Q ss_pred cCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHH
Q 013318 182 KDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI 260 (445)
Q Consensus 182 ~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 260 (445)
.+ .+||. .+.+.+++.++..++. ++.||++++++++ + . ++..++..+.+|+|+++..
T Consensus 154 ~~-----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~---~~~~~~~~~~~~~~~~~~~ 211 (385)
T TIGR00710 154 VW-----------LSWHA-IFAFLSLAGILLSALIFFILPETLPYEARI--Q-----I---STYFETFLLLLKSKMFWGY 211 (385)
T ss_pred HH-----------cCHHH-HHHHHHHHHHHHHHHHHHhCCCCCCCcccC--C-----H---HHHHHHHHHHHcCchhHHH
Confidence 33 25653 3444444444433333 3445433211110 0 0 1112234456788887765
Q ss_pred HHHHHHHHHHHHHHHhhhccccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHH
Q 013318 261 IPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL 339 (445)
Q Consensus 261 ~~~~~~~g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~ 339 (445)
..................+.++. ..+.+.++.+.+....+++.++++++.|++.||+++|+.+ ..+..+..++.++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 290 (385)
T TIGR00710 212 ALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLL-RMGLILFAVSAVLLE 290 (385)
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHH
Confidence 43322211111111122232222 2345666788888889999999999999999999988743 445444443322111
Q ss_pred h-hccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHH-HHHHHHHhh
Q 013318 340 I-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCA-SIAVVFFIG 406 (445)
Q Consensus 340 ~-~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~-g~~ig~~i~ 406 (445)
. ...+... ........++.|++.+...+.......+..|++++++.++++..+.. |...++.++
T Consensus 291 ~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 291 ITAILGLGS---WAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHhccch---HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111 12344556678888888888878888888887777788887777654 444555444
No 25
>PRK10133 L-fucose transporter; Provisional
Probab=99.93 E-value=2.5e-23 Score=210.47 Aligned_cols=357 Identities=12% Similarity=0.082 Sum_probs=221.9
Q ss_pred cccccCcccccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhh
Q 013318 17 SLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNAL 92 (445)
Q Consensus 17 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l 92 (445)
+||..+.+++...++.+.+.++..-........+.|.+.++.+++... .+..+..+++++++.|++.||+|||+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l 94 (438)
T PRK10133 15 DKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI 94 (438)
T ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 445566666777778887777777666666667778887667776654 3445556778899999999999999999
Q ss_pred hhhhHHHHHHHHHh----hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHH
Q 013318 93 ILGTTGYWLFVAAN----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS 168 (445)
Q Consensus 93 ~~g~~~~~~~~~~~----~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~l 168 (445)
..+..++.+..+.+ ..+++..+++.|+++|+|.|..+++.+.++.++. ++++|++.+++++..+.+
T Consensus 95 ~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~----------~~~~~~~~~s~~~~~~~~ 164 (438)
T PRK10133 95 ITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG----------PESSGHFRLNLAQTFNSF 164 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC----------ChhhHHHHHHHHHHHHHH
Confidence 99999887766542 4689999999999999999999999999998775 345666679999999999
Q ss_pred hhhhhhHHHHHhh-cCccc-cccc---c--CCC--------CCcchhHHHHHHHHHHHHHHHHHhccCCcccCccccccc
Q 013318 169 HQFVGNLITLAVL-KDDKV-CAAL---L--GGS--------TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADA 233 (445)
Q Consensus 169 g~~iG~li~~~l~-~~~~~-~~~~---~--~~~--------~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~ 233 (445)
|..+|++++..+. ...+. +.+. . ... .+||. .|.....+..+..++..+.+.|+.+++++ .+
T Consensus 165 G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~-~f~~~~~v~~~~~~~~~~~~~p~~~~~~~-~~- 241 (438)
T PRK10133 165 GAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQT-PYMIIVAIVLLVALLIMLTKFPALQSDNH-SD- 241 (438)
T ss_pred HHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCcccc-cc-
Confidence 9999998876543 11100 0000 0 000 12332 22221212211122222222232211111 00
Q ss_pred chhhhhHHHHHHHHHHHhhccchhHHHHHH-HHHHHHHHHHHHhhhcccccc--cccccchhHHHHHHHHHHHHHHHhhh
Q 013318 234 SVNFYSYLVSLSKSITTLLADVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDAICSLAA 310 (445)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~-~~~~g~~~~f~~~~~~~~~~~--~~~~~~~~g~~~~~~~i~~~~g~~~~ 310 (445)
. +..+ ..++..+.+|+|+++..... +++.+.+.+.+ .+.+.++.+ .+++....+..+..++++..+|+++.
T Consensus 242 -~-~~~~---~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~ 315 (438)
T PRK10133 242 -A-KQGS---FSASLSRLARIRHWRWAVLAQFCYVGAQTACW-SYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTG 315 (438)
T ss_pred -c-cccc---hhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0001 11233456788887644332 23333332222 233333222 35566678999999999999999999
Q ss_pred hccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHH
Q 013318 311 GRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQ 390 (445)
Q Consensus 311 G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~ 390 (445)
|++.||+++|+. +..+.++..+.+.. . .+.++. ..+....++|++.+...|..++...+..|++.+.+.++
T Consensus 316 g~l~~r~g~~~~-l~~~~~~~~~~~~~-~-~~~~~~------~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l 386 (438)
T PRK10133 316 TWLISRFAPHKV-LAAYALIAMALCLI-S-AFAGGH------VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSF 386 (438)
T ss_pred HHHHHHcCHHHH-HHHHHHHHHHHHHH-H-HHcCCh------HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhH
Confidence 999999998874 44555444433321 1 222221 22445677899999999999999999888765555554
Q ss_pred HHHHHHHHHHHH
Q 013318 391 LKVWQCASIAVV 402 (445)
Q Consensus 391 ~~~~~~~g~~ig 402 (445)
.. .+..|..++
T Consensus 387 ~~-~~~~g~~~~ 397 (438)
T PRK10133 387 IV-MTIIGGGIV 397 (438)
T ss_pred Hh-HHhccchHH
Confidence 43 233444333
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.93 E-value=5.5e-23 Score=206.19 Aligned_cols=328 Identities=13% Similarity=0.051 Sum_probs=207.0
Q ss_pred hhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHH
Q 013318 46 AAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLY 120 (445)
Q Consensus 46 ~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l 120 (445)
..+...+.+.++.+.+... .+.....+.+++++.|++.||+|||+++.++.....+..... ..+++..++..|++
T Consensus 31 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 110 (406)
T PRK15402 31 MIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFL 110 (406)
T ss_pred hHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 3334445555555655433 344555667788899999999999999999988776655543 57888889999999
Q ss_pred hhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchh
Q 013318 121 LGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTL 200 (445)
Q Consensus 121 ~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~ 200 (445)
+|++.+..++...+++.++. ++++|++..++......++..+||+++..+..+ .+||.
T Consensus 111 ~G~~~~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----------~~w~~- 168 (406)
T PRK15402 111 QGIGLCFIGAVGYAAIQESF----------EEADAIKITALMANVALLAPLLGPLVGAALIHV-----------LPWRG- 168 (406)
T ss_pred HHhHhhhHHHHHHHHHHHHh----------ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------cCccH-
Confidence 99999988888788888886 467888989988888888889999888766532 25764
Q ss_pred HHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhc
Q 013318 201 LFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT 279 (445)
Q Consensus 201 ~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~ 279 (445)
.+.+.+++.++..+.. ..+||++++++++ + +.++..++..+.+|+|+++.......+.+.....+....|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 239 (406)
T PRK15402 169 MFVLFAALAALSFFGLWRAMPETAGRVGEK--L-------SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSP 239 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcccccc--c-------cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 4555555554444333 3355432211111 0 0111223345677888887655444333332222222233
Q ss_pred cccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhc-cCCCCccchhHHHHH
Q 013318 280 KEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINY-SVTSGVLGTLYPLIM 357 (445)
Q Consensus 280 ~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 357 (445)
.++. ..+.+..+.+.......++..+++++.|++.||.++|+. +..+.++..++..+..... .+... +....+.
T Consensus 240 ~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~ 315 (406)
T PRK15402 240 VILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSL-IRMGLWPMVAGLLLAALATVISSHA---YLWLTAG 315 (406)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-HHHHHHHHHHHHHHHHHHHHccccc---HHHHHHH
Confidence 3221 134444567777777778889999999999999998764 4556555444432111111 11111 2334566
Q ss_pred HHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcc
Q 013318 358 AALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY 408 (445)
Q Consensus 358 ~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~ 408 (445)
.+++|++.+...+..+.......|++++++.+.+++.+..|..+|..+.+.
T Consensus 316 ~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~ 366 (406)
T PRK15402 316 LSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKH 366 (406)
T ss_pred HHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777888887777666555544455567778888888888888777666543
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.93 E-value=6.3e-24 Score=210.41 Aligned_cols=366 Identities=13% Similarity=0.042 Sum_probs=224.3
Q ss_pred HHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhh
Q 013318 39 LIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYT 113 (445)
Q Consensus 39 ~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~ 113 (445)
+.+.+........|.+.++.+.+... .+.......+++++.|++.||+|||+++.++.++..+..... ..+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVS 84 (399)
T ss_pred HHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHH
Confidence 34445445555566666665655543 344444566788899999999999999999988777666554 5789999
Q ss_pred HHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCC
Q 013318 114 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGG 193 (445)
Q Consensus 114 li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~ 193 (445)
+++.|++.|+|.+..++....++.++. |+++|++.+|+......+|..+|+.++..+...
T Consensus 85 ~~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------- 144 (399)
T TIGR00893 85 LYILRVLLGAAEAPFFPGIILIVASWF----------PASERATAVSIFNSAQGLGGIIGGPLVGWILIH---------- 144 (399)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhC----------CHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh----------
Confidence 999999999999999999999999997 467899999999999999999999888766533
Q ss_pred CCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcc-cccccc--h-h------hhhHHHHHHHHHHHhhccchhHHHHH
Q 013318 194 STSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEK-ETADAS--V-N------FYSYLVSLSKSITTLLADVRMLLIIP 262 (445)
Q Consensus 194 ~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~-~~~~~~--~-~------~~~~~~~~~~~~~~~l~~~~~~~l~~ 262 (445)
.+||. .|.+.+++.++..++. ++.|+++++++. +.++++ . . .+.+.++..+...+.+|+|+++....
T Consensus 145 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (399)
T TIGR00893 145 -FSWQW-AFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLAL 222 (399)
T ss_pred -CCchH-HHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHH
Confidence 24653 4444444444333333 334543321111 000000 0 0 00000011123445678888776655
Q ss_pred HHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHH-HHHHH--HHHHH
Q 013318 263 LFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA-IAQVV--VFLWI 338 (445)
Q Consensus 263 ~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~-~~~~~--~~~~~ 338 (445)
..+............++.++.+ .+.+..+.+......+++.++++++.|++.||+++|+..+.... ..... .....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T TIGR00893 223 GQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLL 302 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Confidence 4444333332333344433322 24445567888889999999999999999999998752111111 11111 01000
Q ss_pred HhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----hh-HH
Q 013318 339 LINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----IS-LQ 412 (445)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~-~~ 412 (445)
......... ....+...+.+.......+..++++.+.+|++ ++.++|+++....+|..+++.+.+. .+ +.
T Consensus 303 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~ 378 (399)
T TIGR00893 303 MFATNYVNI----PYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFA 378 (399)
T ss_pred HHHhccchh----HHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchh
Confidence 111111111 12222222333333336788889999999876 4557899999888888877666543 23 66
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013318 413 AMLIVMVVGICVALVGIL 430 (445)
Q Consensus 413 ~~~~i~~~~~~~~~~~~~ 430 (445)
..+.+.+++.+++.+.++
T Consensus 379 ~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 379 GALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 677777776666665554
No 28
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=1.8e-23 Score=215.10 Aligned_cols=346 Identities=13% Similarity=0.062 Sum_probs=220.1
Q ss_pred HHHHHHHHHHHHHhhhHhhhhhhccCCCCchH----HHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-
Q 013318 32 ILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN- 106 (445)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~----~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~- 106 (445)
.+.++.++...+........|++.++.+.+.. ..+.....+++++++.|++.||+|||++++++..++.+..+.+
T Consensus 10 ~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~ 89 (495)
T PRK14995 10 IIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAA 89 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 33344444444433444556777666555432 2344455667888999999999999999999999888766654
Q ss_pred hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccc
Q 013318 107 LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKV 186 (445)
Q Consensus 107 ~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~ 186 (445)
..+++..+++.|+++|+|.+...+.....+.+..+ ++++|++++|++.....+|..+||+++..+..+
T Consensus 90 ~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~---------~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~--- 157 (495)
T PRK14995 90 FSPTASWLIATRALLAIGAAMIVPATLAGIRATFT---------EEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH--- 157 (495)
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---
Confidence 67999999999999999999988877777766642 467899999999999999999999999887643
Q ss_pred cccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccch-------------------hhhhHH-----
Q 013318 187 CAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV-------------------NFYSYL----- 241 (445)
Q Consensus 187 ~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~-------------------~~~~~~----- 241 (445)
.+||. .|.+...+.++..++. +++|+++++++++.+.... ......
T Consensus 158 --------~gwr~-~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 228 (495)
T PRK14995 158 --------FYWGS-VFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLT 228 (495)
T ss_pred --------CChHH-HHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 35764 4555555554444433 4566533221111110000 000000
Q ss_pred ------------HHHHH-----HHHHhhccchhHHHHHHHHHHHHHHHHHHhhhccccc-ccccccchhHHHHHHHHHHH
Q 013318 242 ------------VSLSK-----SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFD 303 (445)
Q Consensus 242 ------------~~~~~-----~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~ 303 (445)
..+.+ -..+++|+|.+.......+..+....-....++.++. ..+.+..+.|+.+..++++.
T Consensus 229 ~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~ 308 (495)
T PRK14995 229 LLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVAS 308 (495)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 00000 0125677777655444333333322111122333321 24566678999999999999
Q ss_pred HHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC
Q 013318 304 AICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD 383 (445)
Q Consensus 304 ~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~ 383 (445)
.+++++.|++.||+++|+ ++..|.++..++..+.. ....+.+ ....+...++.|++.+...+.......+..|++
T Consensus 309 ~~~~~~~g~l~~r~g~~~-~~~~g~~~~~~~~~~l~-~~~~~~~---~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~ 383 (495)
T PRK14995 309 GFSGPIAGILVSRLGLRL-VATGGMALSALSFYGLA-MTDFSTQ---QWQAWGLMALLGFSAASALLASTSAIMAAAPPE 383 (495)
T ss_pred HHHHHHHHHHHHHcCchH-HHHHHHHHHHHHHHHHH-HhcCCCc---hHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHH
Confidence 999999999999999876 55667666555443211 1222222 133455677889998888877777777778766
Q ss_pred ch-hhHHHHHHHHHHHHHHHH
Q 013318 384 TE-GAFAQLKVWQCASIAVVF 403 (445)
Q Consensus 384 ~~-~a~~~~~~~~~~g~~ig~ 403 (445)
++ .+.+++++.+.+|.++|.
T Consensus 384 ~~g~~~~~~~~~~~lG~~~G~ 404 (495)
T PRK14995 384 KAAAAGAIETMAYELGAGLGI 404 (495)
T ss_pred hcchHHHHHHHHHHHHHHHHH
Confidence 44 577888888888876653
No 29
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=4.1e-23 Score=206.53 Aligned_cols=359 Identities=14% Similarity=0.088 Sum_probs=219.1
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhh-hccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~ 99 (445)
|-++++..+.+..+..+.+......+.|. +.++.+.+.... +..+..+++++++.|++.||+||||++..+.+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 44667777777777766665555555554 445566665543 4444566788899999999999999999998766
Q ss_pred HHHHHHh----hh-----cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhh
Q 013318 100 WLFVAAN----LF-----PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ 170 (445)
Q Consensus 100 ~~~~~~~----~~-----~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~ 170 (445)
.+..... .. .++..+++.|+++|+|.+..+++..+++.++. ++++|++++|+.......|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~ 161 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRV----------GALHTGRVISWNGIATYGAL 161 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhc----------ChhhhccchhhhhhhhhHHH
Confidence 5533221 12 24567888999999999999998888888876 46789999999988889999
Q ss_pred hhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccC-CcccCcccccccchhhhhHHHHHHHHHH
Q 013318 171 FVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EEDKGEKETADASVNFYSYLVSLSKSIT 249 (445)
Q Consensus 171 ~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (445)
++|+.++..+..+ .+|+. .+.+.. .+..+..++.++ |++.++++ + +.+.++..++
T Consensus 162 ~~g~~l~~~l~~~-----------~g~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~-- 217 (399)
T PRK05122 162 AIGAPLGVLLYHW-----------GGLAG-LGLLIM---LLALLGLLLARPRPAVPPVKG--E-----RLPFRRVLGR-- 217 (399)
T ss_pred HHHHHHHHHHHHc-----------ccHHH-HHHHHH---HHHHHHHHHHhcCCCCCCCCc--c-----chhHHHHHHH--
Confidence 9999988776543 25653 232222 222222223332 22111110 0 1111111111
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHH
Q 013318 250 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAI 329 (445)
Q Consensus 250 ~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~ 329 (445)
.+..........+.........+.++.+.+ .+..+.....++++.++++++.|++.||+++|+. ...+..
T Consensus 218 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-~~~~~~ 287 (399)
T PRK05122 218 -------VWPYGMGLALASIGFGTIATFITLYYAARG--WDGAALALTLFGVAFVGARLLFGNLINRLGGLRV-AIVSLL 287 (399)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--cccchHHHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHH
Confidence 111111111111111111122222222222 2445666678888999999999999999998774 445555
Q ss_pred HHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhc-
Q 013318 330 AQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP- 407 (445)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~- 407 (445)
+..++.. .....++ ....++..+++|++.+...+.......+..|++ +++++|+++....+|..++..+.+
T Consensus 288 ~~~~~~~--~~~~~~~-----~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 360 (399)
T PRK05122 288 VEILGLL--LLWLAPS-----PWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGL 360 (399)
T ss_pred HHHHHHH--HHHHhcc-----HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444432 1222322 234456677889988888777777777888766 456888888888877665544433
Q ss_pred ---chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 408 ---YISLQAMLIVMVVGICVALVGILFLTI 434 (445)
Q Consensus 408 ---~~~~~~~~~i~~~~~~~~~~~~~~~~~ 434 (445)
..++...+.+.+++++++.+......+
T Consensus 361 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 361 VASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 345777777777777777666554443
No 30
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=6.3e-23 Score=204.72 Aligned_cols=363 Identities=14% Similarity=0.118 Sum_probs=225.1
Q ss_pred cccCcccccchhHHHHHHHHHHHHHHhhhHhhhhh-hccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhh
Q 013318 19 QVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALI 93 (445)
Q Consensus 19 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~ 93 (445)
|.|++++.++..+.+.++.++.+.+.....++.|. +.+|.+.+.... +..+...++++++.|+++||+||||+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~ 85 (392)
T PRK12382 6 QTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSAL 85 (392)
T ss_pred cCcCCCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHH
Confidence 45566667777777777777766665555555553 445556665443 4444556778899999999999999999
Q ss_pred hhhHHHHHHHHH----hh-----hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHH
Q 013318 94 LGTTGYWLFVAA----NL-----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWG 164 (445)
Q Consensus 94 ~g~~~~~~~~~~----~~-----~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~ 164 (445)
.+.+...+..+. .. .+++..+++.|+++|+|.+..+++..+++.++. |+++|++++|+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~a~~~~~~ 155 (392)
T PRK12382 86 QGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLV----------GPKHSGKVMSWNGM 155 (392)
T ss_pred HHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----------CccccchhhhHHHH
Confidence 988765443221 11 257788889999999999999988888888876 57899999999998
Q ss_pred HHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccC-CcccCcccccccchhhhhHHHH
Q 013318 165 MFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EEDKGEKETADASVNFYSYLVS 243 (445)
Q Consensus 165 ~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (445)
....|..+|++++..+... .+|+. .+.+. .++..+..++.++ |+++++++ + +++.++
T Consensus 156 ~~~~g~~~g~~~~~~l~~~-----------~g~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~ 213 (392)
T PRK12382 156 AMYGALAAGAPLGLLLHSH-----------FGFAA-LALTT---MVLPLLAWAFNGTVRKVPAHAG--E-----RPSLWS 213 (392)
T ss_pred HHHHHHHHHHHHHHHHHhc-----------cChHH-HHHHH---HHHHHHHHHHHHhccCCCCCcc--c-----CchHHH
Confidence 8889999999988766532 35653 22221 1222222222222 22111111 0 111122
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccch
Q 013318 244 LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFI 323 (445)
Q Consensus 244 ~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~ 323 (445)
.. +.++.+.+.... .+..........+.++.+. +.++.+.....++++.++++++.|++.||+++|+.+
T Consensus 214 ~~----~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~ 282 (392)
T PRK12382 214 VV----GLIWKPGLGLAL-----QGVGFAVIGTFVSLYFASK--GWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA 282 (392)
T ss_pred HH----HHHHHhHHHHHH-----HHHHHhHHHHHHHHHHHhc--CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh
Confidence 11 222222221111 1111111112222222222 334556666778888899999999999999988744
Q ss_pred HhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHH
Q 013318 324 VSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVV 402 (445)
Q Consensus 324 i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig 402 (445)
..+..+..++++. ....++ ....++..+++|++.+...+...+...+.+|++ +++++|+++....+|..++
T Consensus 283 -~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig 354 (392)
T PRK12382 283 -IVSLLVETVGLLL--LWLAPT-----AWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVS 354 (392)
T ss_pred -HHHHHHHHHHHHH--HHHccc-----HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555554432 223322 234556677888888888787788888888765 5568899888888887777
Q ss_pred HHhhcc----hhHHHHHHHHHHHHHHHHHHHHHH
Q 013318 403 FFIGPY----ISLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 403 ~~i~~~----~~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
..+.+. .++...+.+.+++.+++.+..++.
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 355 GPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 655543 356777777777777766655433
No 31
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=6.7e-23 Score=202.42 Aligned_cols=339 Identities=11% Similarity=0.057 Sum_probs=203.9
Q ss_pred HhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhh-hcchhhHHhHHHHhh
Q 013318 48 QNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL-FPSWYTMVPASLYLG 122 (445)
Q Consensus 48 ~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~-~~~~~~li~~r~l~G 122 (445)
+.+.|.+.+|.+++... .+.++..+++++++.|++.||+|||+++..+............ .+++..+++.|+++|
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 90 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAA 90 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34555665555555443 3445667889999999999999998876655443333322222 378999999999999
Q ss_pred hhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHH
Q 013318 123 FAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLF 202 (445)
Q Consensus 123 ig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~ 202 (445)
+|++... .....++++. |++||++++++.+....+|.++|++++..+..+ .+||. .|
T Consensus 91 ~g~~~~~-~~~~~~~~~~----------~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-----------~gWr~-~f 147 (368)
T TIGR00903 91 LGQPFLL-NAFAPAASQI----------REERRDLVISLLSFAMYLGIIFALAAGLKIYTA-----------GGLQL-LI 147 (368)
T ss_pred hHhHHHH-HHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------cchHH-HH
Confidence 9999754 4455567776 578999999999999999999999888877532 36874 45
Q ss_pred HHHHHHHHHHHHH-HHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhccc
Q 013318 203 IVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKE 281 (445)
Q Consensus 203 ~i~~~l~~~~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~ 281 (445)
.+.+++.++..++ .+++||+++.+++. .+ . + +..++..+++|+|+++.+....+..........++.|++
T Consensus 148 ~~~~~l~~~~~~~~~~~lp~~p~~~~~~---~~--~-~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~ 218 (368)
T TIGR00903 148 IPIAAVAAAGIILVLAALPALPFQAAEG---FG--F-K---DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAA 218 (368)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCCC---cc--h-H---HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555444333 35677643322111 00 0 0 112245567889998877654444333222334567766
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCc---cchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHH
Q 013318 282 IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSI---TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMA 358 (445)
Q Consensus 282 ~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~---~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (445)
+.+.+++.+ .+.......+...++ .++++||..|| +.......++.++... ...+.++. .......
T Consensus 219 L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~--~~~~~~~~-----~~~~~~~ 287 (368)
T TIGR00903 219 LRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFL--ALAFELNR-----LALFAFI 287 (368)
T ss_pred HHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHH--HHHHcccc-----HHHHHHH
Confidence 644445543 455555555555555 36777776543 3222222222222221 12223221 2233344
Q ss_pred HHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhc-ch-hHHHHHHHHHHHHHHHHHHH
Q 013318 359 ALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP-YI-SLQAMLIVMVVGICVALVGI 429 (445)
Q Consensus 359 ~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~-~~-~~~~~~~i~~~~~~~~~~~~ 429 (445)
.+.+++.....+..+++.+|.+|++ ++++.|+.+....+|..+++.+.+ .. +....+.++++..+++.+..
T Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 288 GIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred HHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 4455555555566778999999986 556888888887777755543332 22 55666777777666666554
No 32
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.93 E-value=2.8e-22 Score=200.13 Aligned_cols=339 Identities=14% Similarity=0.051 Sum_probs=205.4
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~ 103 (445)
|++..+.++.++...+-.......+.+..+.+.+... .+.....+++.+++.|++.||+|||++++++..++.+..
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGC 82 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHH
Confidence 4555566665554433222222222333333333322 344455778889999999999999999999998876655
Q ss_pred HHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhc
Q 013318 104 AAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (445)
Q Consensus 104 ~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~ 182 (445)
+.+ ..++. +..|+++|++.+..+|+..+++.++. |+++|+++.|+.....+.|.++||.+++.+..
T Consensus 83 ~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~----------~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 83 LLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELL----------PGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543 33443 56899999999999999999999998 46899999999999999999999999887753
Q ss_pred CccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHH
Q 013318 183 DDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP 262 (445)
Q Consensus 183 ~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 262 (445)
. .|+. .+.+...+.+++.+....+|++++++++. ++ + .....++......+++|+|.+.....
T Consensus 150 ~------------~~~~-~~~i~~~~~~~~~~~~~~l~~~~~~~~~~-~~-~--~~~~~~~~~~~~~~l~~~~~~~~~~~ 212 (393)
T PRK11195 150 P------------HAEA-ALAVCALIYLLAALFNLFIPRLGARRPGQ-SW-N--PIALLRDFFHACRVLWRDKLGRFSLA 212 (393)
T ss_pred H------------HHHH-HHHHHHHHHHHHHHHHhcCCCCccccccc-CC-C--HHHHHHHHHHHHHHHHhCchhHHHHH
Confidence 2 1332 23232322233333334566543211111 00 0 00001111112234567776653332
Q ss_pred HHHH-HHHHH--HHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHH
Q 013318 263 LFAY-SGLQQ--AFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL 339 (445)
Q Consensus 263 ~~~~-~g~~~--~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~ 339 (445)
.... .+... .+....+.+.. -+.+..+.|++.+..+++.+++++..+++.||.++++ ++..+..+. .... .
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~--lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~-~~~~g~~~~-~~~~--~ 286 (393)
T PRK11195 213 GTTLFWGAGATLRFLVLAWAPVA--LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR-VLPAGILMG-LVVL--L 286 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-hHHHHHHHH-HHHH--H
Confidence 2111 11111 11111111111 2455667899999999999999999999999988765 444554332 2211 1
Q ss_pred hhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc--hhhHHHHHHHHHHHHHHHHHhhc
Q 013318 340 INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT--EGAFAQLKVWQCASIAVVFFIGP 407 (445)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~--~~a~~~~~~~~~~g~~ig~~i~~ 407 (445)
....++ +....+..+++|++.+...+..++.+.+..|+|. +.+.|+.++.+.++..++..+..
T Consensus 287 ~~~~~~-----~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~ 351 (393)
T PRK11195 287 MALQHS-----LLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYS 351 (393)
T ss_pred HHHHhH-----HHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHH
Confidence 222222 2334456667888888877777888888766654 45788999999988777665543
No 33
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.93 E-value=3.2e-23 Score=218.69 Aligned_cols=166 Identities=10% Similarity=0.001 Sum_probs=118.3
Q ss_pred hHhhhhhhccCCCCchH----HHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHh
Q 013318 47 AQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYL 121 (445)
Q Consensus 47 ~~~~~~~i~~~~~~g~~----~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~ 121 (445)
...+.|.+..+.+++.. ..++.+....+++++.|+++||+|||++++++.+++++..+.. +.+++..+++.|++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~ 265 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLS 265 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 44566666555555442 2455666778899999999999999999999988877766543 678899999999999
Q ss_pred hhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCcc--ccccccCCCCCcch
Q 013318 122 GFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--VCAALLGGSTSGTT 199 (445)
Q Consensus 122 Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~--~~~~~~~~~~~w~~ 199 (445)
|+|.|...+...++++++. |+++||+.+++..++..+|.++++.++..+....+ .+........+||.
T Consensus 266 G~g~g~~~p~~~~~isE~~----------p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~ 335 (742)
T TIGR01299 266 GFGIGGAIPIVFSYFAEFL----------AQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRV 335 (742)
T ss_pred HHHHHHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHH
Confidence 9999999999999999998 46789999999999999999999887765542211 00000001236764
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCc
Q 013318 200 LLFIVFLGVITLGTILMCFLRKEE 223 (445)
Q Consensus 200 ~~~~i~~~l~~~~~~l~~~l~~~~ 223 (445)
++.+.++..++.+++.+++||++
T Consensus 336 -l~~i~~lp~ll~ll~~~~lPESP 358 (742)
T TIGR01299 336 -FVIVCAFPCVFAIGALTFMPESP 358 (742)
T ss_pred -HHHHHHHHHHHHHHHHHHcCCCH
Confidence 44444444444444456788754
No 34
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.93 E-value=2.2e-22 Score=200.93 Aligned_cols=346 Identities=14% Similarity=0.035 Sum_probs=210.1
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHH
Q 013318 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (445)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~ 99 (445)
+|.+|..++..+...+.........+..|.+.++.+.+... .+.....+.+++++.|+++||+|||+++.++..+.
T Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 4 QRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 34555555554444443433333334556666666665543 34444466778899999999999999999998877
Q ss_pred HHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHH
Q 013318 100 WLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (445)
Q Consensus 100 ~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~ 178 (445)
.+..+.. ..+++..+++.|++.|++.+...+....+..+.. ++++++++.++.......+..+|+.++.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~ 153 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLY----------EGTQLRHANSLLNMGILVSPLLAPLIGG 153 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665544 5688899999999999999877766666666654 4578999999988888888889998887
Q ss_pred HhhcCccccccccCCCCCcchhHHHHHHHHHHHHHH-HHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchh
Q 013318 179 AVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRM 257 (445)
Q Consensus 179 ~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~-l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (445)
.+... .+||. .|.+..++..+..+ ..+++||+++.++++ .+.+ +...+.+|+|++
T Consensus 154 ~l~~~-----------~g~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~ 209 (394)
T PRK11652 154 LLTTL-----------FGWRA-CYLFLLLLGAGVTFSMARWMPETRPADARR---------TRVL---ASYRTLLSNRRF 209 (394)
T ss_pred HHHhc-----------cChHH-HHHHHHHHHHHHHHHHHHhCCccCccccch---------hHHH---HHHHHHHcChHH
Confidence 66432 35764 34444333333222 234455532211100 0111 233456677776
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHH
Q 013318 258 LLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 336 (445)
Q Consensus 258 ~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~ 336 (445)
+......+.............+..+.+ .+.+..+.++......++..+++.+.+++.||.+++. . .+.....++.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~--~~~~~~~~~~~ 286 (394)
T PRK11652 210 NCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM-W--QSVICCLLAGL 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--HHHHHHHHHHH
Confidence 543322221111111111222222221 2344556787777888888999999999999987332 2 22222221111
Q ss_pred H-HHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcch
Q 013318 337 W-ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 409 (445)
Q Consensus 337 ~-~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~~ 409 (445)
. ....+....+ ........+++|++.+...+...+...+..|++++.+.++.+..+.+|..++..+.+..
T Consensus 287 ~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 287 LMWIPGWFGVMN---VWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred HHHHHHHhcccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1 1111111111 13345566778888888888888888888887777788888888888888877666544
No 35
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.92 E-value=6.2e-23 Score=204.86 Aligned_cols=358 Identities=13% Similarity=0.053 Sum_probs=216.8
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~ 100 (445)
+.++.+....+++++....+.....+.|.+.++.+.+... .+.......+++++.|++.||+|||+++.++.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~ 88 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFS 88 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3445555666666666666666667777776666665543 344555667889999999999999999999988777
Q ss_pred HHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHH
Q 013318 101 LFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (445)
Q Consensus 101 ~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~ 179 (445)
+..+.. ..+++..++..|++.|++.+..++...+++.++. ++++|++++|+......+|.++|++++..
T Consensus 89 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 89 AGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESW----------PKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhC----------ChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665544 6789999999999999999999999999999987 46799999999999999999999988876
Q ss_pred hhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccch-h-------hhhHHHHHHHHHHHh
Q 013318 180 VLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASV-N-------FYSYLVSLSKSITTL 251 (445)
Q Consensus 180 l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~ 251 (445)
+....+ .+||. .+.+..+..++..+....+||+++.++++.++++. . .....+...++..+.
T Consensus 159 l~~~~~---------~~w~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (405)
T TIGR00891 159 VVPVWG---------DGWRA-LFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAA 228 (405)
T ss_pred HHHhcC---------ccHHH-HHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHH
Confidence 654321 24764 34333322222222234455543211110000000 0 000000000110000
Q ss_pred hc--cch----hHHHHHHHHHHHHHHHHHHhhhccccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchH
Q 013318 252 LA--DVR----MLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIV 324 (445)
Q Consensus 252 l~--~~~----~~~l~~~~~~~g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i 324 (445)
.+ .++ +..+.......+.........++.++. +.+++..+.+.+....+++.++++++.|++.||++||+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~- 307 (405)
T TIGR00891 229 MVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAY- 307 (405)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhh-
Confidence 00 011 111111111112111111223443332 2345566788888899999999999999999999988744
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHH
Q 013318 325 SGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVF 403 (445)
Q Consensus 325 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~ 403 (445)
..+.++..+.... .....++ .....+..++.++..+...+..++++.+.+|++. ++++|+.+....+|..+++
T Consensus 308 ~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~ 381 (405)
T TIGR00891 308 VCSLLAGQLLIIP-VFAIGAN-----VAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAP 381 (405)
T ss_pred HHHHHHHHHHHHH-HHHhCCc-----hHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHH
Confidence 4444433222111 1122211 1233334455566555566677788999998764 5578988888888888777
Q ss_pred Hhhcch
Q 013318 404 FIGPYI 409 (445)
Q Consensus 404 ~i~~~~ 409 (445)
.+.+.+
T Consensus 382 ~~~g~l 387 (405)
T TIGR00891 382 IIGALL 387 (405)
T ss_pred HHHHHH
Confidence 666543
No 36
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=8.5e-23 Score=200.68 Aligned_cols=309 Identities=14% Similarity=0.081 Sum_probs=203.6
Q ss_pred HHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhhc-----chhhHHhHHHHhhhhhHHhhhhhhhHHHHhh
Q 013318 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFP-----SWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (445)
Q Consensus 67 ~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~~-----~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~ 140 (445)
.......+++++.|++.||+|||+++..+..+..+.... ...+ ++..+++.|+++|++.+..+++..+++.++.
T Consensus 42 ~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 121 (365)
T TIGR00900 42 AGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLV 121 (365)
T ss_pred HHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 334455678889999999999999999998776554433 2334 8888999999999999999999999999997
Q ss_pred hhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhcc
Q 013318 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLR 220 (445)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~ 220 (445)
++++|++++|+.....++|..+|++++..+... .+||. .+.+..+..++..++.++++
T Consensus 122 ----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----------~g~~~-~~~~~~~~~~~~~~~~~~~~ 179 (365)
T TIGR00900 122 ----------PEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT-----------LGIKW-AIWVDAVGFAISALLIVSVR 179 (365)
T ss_pred ----------CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-----------hhHHH-HHHHHHHHHHHHHHHHHhcc
Confidence 467999999999999999999999998876533 24654 34443433333333334444
Q ss_pred CCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH-HHHHhhhcccccc-cccccchhHHHHHH
Q 013318 221 KEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQ-AFVWAEFTKEIVT-PALGVSGVGGAMAV 298 (445)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~-~f~~~~~~~~~~~-~~~~~~~~g~~~~~ 298 (445)
+|+++++++ ++.+.+ ..++..+...+.+|+|+++......+..+... ......+|.+..+ .+.+..+.+.+...
T Consensus 180 ~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (365)
T TIGR00900 180 IPELAASEI-QALSNA---VLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAA 255 (365)
T ss_pred cccCCCccc-cccchh---HHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHH
Confidence 333221111 110000 11111222344667888766554433333222 1111223322221 24555678888889
Q ss_pred HHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHh
Q 013318 299 YGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI 378 (445)
Q Consensus 299 ~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~ 378 (445)
.+++.++++++.+++.||.++|+ ++..+..+..+++. ...+.++ + ....++..+++|++.+...+...+++.+
T Consensus 256 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 328 (365)
T TIGR00900 256 FGLGALLGALLLGLLGRYFKRMA-LMTGAIFVIGLAIL--VVGLTPP-N---FPLFLVLWFAIGVGYGPINVPQGTLLQR 328 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhchhH-HHHHHHHHHHHHHH--HHHhhch-h---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876 33444444443332 1223322 1 2455667788899999888889999999
Q ss_pred hccCC-chhhHHHHHHHHHHHHHHHHHhhcc
Q 013318 379 LFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 408 (445)
Q Consensus 379 ~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~ 408 (445)
..|++ ++.+.|+++..+.+|..++..+.+.
T Consensus 329 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~ 359 (365)
T TIGR00900 329 RVPAELLGRVFGAQFSLSHAAWPLGLILAGP 359 (365)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99876 4557899999999888887766543
No 37
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.92 E-value=1e-22 Score=204.98 Aligned_cols=325 Identities=11% Similarity=-0.012 Sum_probs=204.0
Q ss_pred HHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh------hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhh
Q 013318 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN------LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (445)
Q Consensus 67 ~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~------~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~ 140 (445)
.......+++++.|++.||+|||+++..+..+.++..... ..+++..+++.|+++|++.+...++..+++.++.
T Consensus 60 ~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~ 139 (417)
T PRK10489 60 LTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALV 139 (417)
T ss_pred HHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Confidence 3344556788899999999999999998877655433221 1467788888999999999988888777887776
Q ss_pred hhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhcc
Q 013318 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLR 220 (445)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~ 220 (445)
++++|+++.++.....++|..+|+.++..+.... +|+. .|.+..+..++..++.+.+|
T Consensus 140 ----------~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-----------~~~~-~~~~~~~~~~~~~~~~~~l~ 197 (417)
T PRK10489 140 ----------GRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-----------GVAW-NYGLAAAGTFITLLPLLRLP 197 (417)
T ss_pred ----------CHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-----------hhHH-HHHHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999887765322 3432 34444444444444445566
Q ss_pred CCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHH
Q 013318 221 KEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVY 299 (445)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~ 299 (445)
+++++++++ ++ ..++.+ +.....+|+|.++......+......+ ....+|.+..+ .+.+....|++.+..
T Consensus 198 ~~~~~~~~~--~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~~~~~~g~~~~~~ 268 (417)
T PRK10489 198 ALPPPPQPR--EH---PLRSLL---AGFRFLLASPVVGGIALLGGLLTMASA-VRVLYPALADEVWQMGAAQIGLLYAAV 268 (417)
T ss_pred CCCCCCccc--cc---chHHHH---HHHHHHHcChHHHHHHHHHHHHHHHHh-HHHhhHHHHHhccCCChhHhHHHHHHH
Confidence 532211111 00 011111 122335667766544332222221111 12334433332 355566788888899
Q ss_pred HHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhh
Q 013318 300 GAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL 379 (445)
Q Consensus 300 ~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~ 379 (445)
+++.++++++.+++.||.++++ .+..+.++..++++ +....++ .....+..+++|++.+...+...+++.+.
T Consensus 269 ~~g~~ig~~~~~~l~~~~~~~~-~l~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 340 (417)
T PRK10489 269 PLGAALGALTSGWLAHSARPGL-LMLLSTLGSFLAVG--LFGLMPM-----WILAVLCLALFGYLSAISSLLQYTLLQTQ 340 (417)
T ss_pred HHHHHHHHHHHHHhhhccCcch-HHHHHHHHHHHHHH--HHHccch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999866554 34455555444432 2233322 23455667778888887777778899999
Q ss_pred ccCC-chhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHH-HHHHHH
Q 013318 380 FKHD-TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICV-ALVGIL 430 (445)
Q Consensus 380 ~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~-~~~~~~ 430 (445)
.|++ +++++|+++..+.+|..+|..+.+. .+....+.+.+++.++ +++...
T Consensus 341 ~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 341 TPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred CCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 9876 5668888888888887777666544 3444455544444333 344333
No 38
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.92 E-value=4.4e-22 Score=199.09 Aligned_cols=326 Identities=13% Similarity=0.077 Sum_probs=190.3
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhhhhhcc-CCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHH
Q 013318 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (445)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~-~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~ 100 (445)
.+||.+...+++.+.|......+.+.+.+.+ +.+++.... ++....++++.++.|++.||+|.|+++.++.++++
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 4578888888888888888777777777654 577776543 34455778888999999999999999999998877
Q ss_pred HHHHHh-hh-----cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhh
Q 013318 101 LFVAAN-LF-----PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (445)
Q Consensus 101 ~~~~~~-~~-----~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~ 174 (445)
+.+... +. +++..+++.|++.|++ +..+++....+++|+ |++|||+++|++....++|..+++
T Consensus 112 i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wf----------p~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 112 IPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFF----------PKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHC----------CHhHhHHHHHHHHHHHhhHHHHHH
Confidence 766543 33 7899999999999998 778888888999987 467899999999766677776665
Q ss_pred HHHHHhh-----cCcccccc-ccC-CCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHH
Q 013318 175 LITLAVL-----KDDKVCAA-LLG-GSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKS 247 (445)
Q Consensus 175 li~~~l~-----~~~~~~~~-~~~-~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (445)
++...+. ........ ... +..+|+. ..++..++.++..++.++..+++++. ++ ..++
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~-~~~~~~~~~iv~~i~~~~~~~~~~~~-~~--------------~~~~ 244 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLAN-AAWIWVPLLAIATIAAWSGMNDIASS-RA--------------SIAD 244 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHH-HHHHHHHHHHHHHHHHHHhCCCcccc-cc--------------CHHH
Confidence 5443322 11100000 000 0123443 33344444444444444443222111 00 1123
Q ss_pred HHHhhccchhHHHHHHHHH-HHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhH
Q 013318 248 ITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG 326 (445)
Q Consensus 248 ~~~~l~~~~~~~l~~~~~~-~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~ 326 (445)
..+.+|+|+.|++..+.+. .|...++ ..++|.++. ..++............+...+.++++|+++||+|+++. ...
T Consensus 245 ~~~vlk~~~~Wllslly~~tFG~fvg~-s~~lp~~~~-~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v-l~~ 321 (462)
T PRK15034 245 QLPVLQRLHLWLLSLLYLATFGSFIGF-SAGFAMLAK-TQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV-TLI 321 (462)
T ss_pred HHHHhCCCchhHHHHHHHHHHHHHHHH-HHHHHHHHH-HHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH-HHH
Confidence 4567899998876654332 1221122 123333321 22222222222334456778888999999999998874 445
Q ss_pred HHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccC
Q 013318 327 GAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH 382 (445)
Q Consensus 327 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~ 382 (445)
+.+...++....+...+++... .............++.+..+...+.++.+++|+
T Consensus 322 ~~i~~~i~~~~~~l~lp~~~~~-~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~ 376 (462)
T PRK15034 322 NFIFMAIFSALLFLTLPGTGSG-NFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQ 376 (462)
T ss_pred HHHHHHHHHHHHHHHhcccccc-HHHHHHHHHHHHHHHhcccchHHHHhhHHHHhh
Confidence 5544333322112223322110 011222222223344444555556677777774
No 39
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=4.4e-23 Score=210.61 Aligned_cols=350 Identities=11% Similarity=-0.085 Sum_probs=210.8
Q ss_pred CCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-h--hcchhhHHhHHHHhhhhhHHhhh
Q 013318 58 GNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWV 130 (445)
Q Consensus 58 ~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~--~~~~~~li~~r~l~Gig~g~~~~ 130 (445)
.+++... .+..+..+.+++++.|++.||+|+|+++.++.+++++..+.. . .+++..+++.|+++|++++..++
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~ 150 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSP 150 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchh
Confidence 3455444 344455677888999999999999999999998877665543 2 35677788899999999999999
Q ss_pred hhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHH
Q 013318 131 GEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVIT 210 (445)
Q Consensus 131 ~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~ 210 (445)
+...+++++. |+++|++++|+.....++|.++|+++...+.... .+||. .|.+.+++.+
T Consensus 151 ~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~----------~gw~~-~f~i~~~~~~ 209 (465)
T TIGR00894 151 ATHKIIVKWA----------PPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW----------GGWPM-IFYVFGIVGC 209 (465)
T ss_pred hHHHHHHhcC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCCCe-ehhhhhHHHH
Confidence 9999999997 4689999999999999999999998887765331 15764 4445555444
Q ss_pred HHHHHHH-hccC-CcccCcccccccch-----hhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhccccc
Q 013318 211 LGTILMC-FLRK-EEDKGEKETADASV-----NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 283 (445)
Q Consensus 211 ~~~~l~~-~l~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~ 283 (445)
+..++.+ +.++ |+++++.+..+++. .++....+......+.+++++++......+...........++|.++.
T Consensus 210 ~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~ 289 (465)
T TIGR00894 210 AWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFIS 289 (465)
T ss_pred HHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333333 3443 22211111000000 000000000012345677888776655444333322233345555543
Q ss_pred c-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccch-------HhHHHHHHHHHHHHHHhhccCCCCccchhHHH
Q 013318 284 T-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFI-------VSGGAIAQVVVFLWILINYSVTSGVLGTLYPL 355 (445)
Q Consensus 284 ~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~-------i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (445)
+ .+++..+.|+..+.+.++..+++++.|+++||+++|+.. +..+..+...+..........+. .....
T Consensus 290 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 365 (465)
T TIGR00894 290 WVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAA----FYLTI 365 (465)
T ss_pred HHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCc----hHHHH
Confidence 2 355666788888899999999999999999987544211 11111111111111011121111 12222
Q ss_pred HHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcc-------hhHHHHHHHHHHHHHHHHHH
Q 013318 356 IMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY-------ISLQAMLIVMVVGICVALVG 428 (445)
Q Consensus 356 ~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~-------~~~~~~~~i~~~~~~~~~~~ 428 (445)
+...+.+.+.+...+.......+..|+..+.+.++.++...+|..+++.+.+. ..+...+.+.++..+++.+.
T Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~ 445 (465)
T TIGR00894 366 IILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIF 445 (465)
T ss_pred HHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 33333344444334444445557777766667889999888888777655543 23566778888888888777
Q ss_pred HHHH
Q 013318 429 ILFL 432 (445)
Q Consensus 429 ~~~~ 432 (445)
+...
T Consensus 446 ~~~~ 449 (465)
T TIGR00894 446 YLIF 449 (465)
T ss_pred eeee
Confidence 6554
No 40
>PRK11043 putative transporter; Provisional
Probab=99.92 E-value=1e-21 Score=196.67 Aligned_cols=337 Identities=11% Similarity=0.009 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh
Q 013318 31 HILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN 106 (445)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~ 106 (445)
.+..+...+.+.+.+...+..|.+.++.+.+... .+.......+++++.|++.||+|||+++..+..+..+.....
T Consensus 9 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 88 (401)
T PRK11043 9 VYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGM 88 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHH
Confidence 3333334444444344444445555555665544 344455667889999999999999999999988776655543
Q ss_pred -hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCcc
Q 013318 107 -LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK 185 (445)
Q Consensus 107 -~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~ 185 (445)
..+++..+++.|+++|+|.+...+...+++.++. +++++++..+..+....++..+|+.++..+..+
T Consensus 89 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-- 156 (401)
T PRK11043 89 LWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRY----------PAQKANRVFATIMPLVALSPALAPLLGAWLLNH-- 156 (401)
T ss_pred HHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 5688889999999999998887777667777775 466788888988888888999999888776533
Q ss_pred ccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHH
Q 013318 186 VCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA 265 (445)
Q Consensus 186 ~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 265 (445)
.+||. .|.+..++.++..++.+++++++++++++ ++ + .+.++.+|+|+++.....+.
T Consensus 157 ---------~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~---~~~~~~~~~~~~~~~~~~~~ 213 (401)
T PRK11043 157 ---------FGWQA-IFATLFAITLLLILPTLRLKPSKKARKQS------QD----A---LTFKQLLKSKTYLGNVLIFA 213 (401)
T ss_pred ---------CChHH-HHHHHHHHHHHHHHHHHHcCCCCCccccc------hH----H---HHHHHHHcChhHHHHHHHHH
Confidence 35764 34444444444444444455432211100 00 1 12345677877764433222
Q ss_pred HHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHH-HHHhhccC
Q 013318 266 YSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSV 344 (445)
Q Consensus 266 ~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~-~~~~~~~~ 344 (445)
........+..+.|.+..+.+++..+.|+.+....++..+|++..+++.||+++|+.. ..+.+...++.. +.......
T Consensus 214 ~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 292 (401)
T PRK11043 214 ACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL-PWLLVLFAVSVIAIWLASLLS 292 (401)
T ss_pred HHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 2211111112333433333455556778877888889999999999999999877633 333333222211 11111111
Q ss_pred CCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhh
Q 013318 345 TSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 345 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
.+. ....++...++|++.+...+...+...+..|++++++.|+++..+..+...+..+.
T Consensus 293 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~ 351 (401)
T PRK11043 293 HPS---LVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLV 351 (401)
T ss_pred cCc---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHH
Confidence 111 13344455677888888888777777777888788889999888776655544443
No 41
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=3.1e-23 Score=202.93 Aligned_cols=339 Identities=16% Similarity=0.163 Sum_probs=211.1
Q ss_pred HHHHHHHHHHhhhHhhhh-hhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhh
Q 013318 35 CAFLLIFLAYGAAQNLET-TVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLF 108 (445)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~-~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~ 108 (445)
++.++...+........| .+.++.+.+... .+.......+++++.|++.||+|||+++.++.++.++.... .+.
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence 344444444444445555 555555554433 33444466788899999999999999999999888776333 334
Q ss_pred cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccc
Q 013318 109 PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCA 188 (445)
Q Consensus 109 ~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~ 188 (445)
++.+.+++.|++.|++.+..+++..+++.++. ++++|++++|+.....++|..+|+.++..+...
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~----- 147 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNALIADWF----------PPEERGRAFGILSAGFSLGSILGPLLGGFLISY----- 147 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------CTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-----
T ss_pred hhHHHHhhhccccccccccccccccccccccc----------hhhhhhhccccccchhhhhhhcccchhhhhhhc-----
Confidence 77778899999999999999999999999997 467999999999999999999999998877532
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHH-HHHhhccchhHHHHHHHHH
Q 013318 189 ALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKS-ITTLLADVRMLLIIPLFAY 266 (445)
Q Consensus 189 ~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~~~~~ 266 (445)
.+||. .|.+.+++.++..++. +++++++++++++.++++.+ +.++..++ ..+..++|.++......+.
T Consensus 148 ------~~~~~-~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (352)
T PF07690_consen 148 ------FGWRW-AFLISAILSLIAAILFILFLPEPPPPRERESPKESES---KKPKPLKPGFKSLFKNPVLWILLIAFFL 217 (352)
T ss_dssp ------CHHCC-HHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT-----HHHCCCH-CTHHHHHHCCHHHHHHHHH
T ss_pred ------ccccc-ccccccchhhhhhhhHhhhhhhccccccccccccccc---ccccccccccccccccchhhhhhhhhhH
Confidence 24654 4555555555554432 34444333222111111100 00111111 2233445555423222222
Q ss_pred HHHHHHHHHhhhcccc-cccccc-cchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccC
Q 013318 267 SGLQQAFVWAEFTKEI-VTPALG-VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV 344 (445)
Q Consensus 267 ~g~~~~f~~~~~~~~~-~~~~~~-~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~ 344 (445)
.++.......+.+.+. ...+.+ ..+.+.+....++...+++++.|++.||+++|+... .......+.... +.....
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~ 295 (352)
T PF07690_consen 218 FFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLL-IAILLLILGALG-LLLLPF 295 (352)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHHHH-HCCSHH
T ss_pred HHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH-HHHHHHHHHHHH-HHHHHH
Confidence 2222222222333321 123344 456788888999999999999999999998765443 333332222211 111111
Q ss_pred CCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHH
Q 013318 345 TSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF 403 (445)
Q Consensus 345 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~ 403 (445)
..+ ....+...+++|++.+...+...+++.+..|++ ++++.|+++..+++|..+|+
T Consensus 296 ~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 296 SSS---PVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HCH---HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 111 234555777889999999999999999999866 45689999999999988875
No 42
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.92 E-value=1.1e-21 Score=197.29 Aligned_cols=342 Identities=13% Similarity=0.060 Sum_probs=206.3
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhh
Q 013318 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (445)
Q Consensus 62 ~~~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~ 140 (445)
....++++..+++++++.|+++||+|||+++..+..++.+....+ ..+++..+++.|+++|++.+...+....++.++.
T Consensus 54 ~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~ 133 (413)
T PRK15403 54 PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAF 133 (413)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345677788888999999999999999999999988887766654 6789999999999999999876666666676765
Q ss_pred hhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-Hhc
Q 013318 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFL 219 (445)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l 219 (445)
++++|+++++++.....+|..+|++++..+..+ .+||. .|.+.+++.++..++. +++
T Consensus 134 ----------~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-----------~gw~~-~f~~~~~~~~i~~~~~~~~l 191 (413)
T PRK15403 134 ----------GQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-----------VHWKV-LFAIIAVMGLIAFVGLLLAM 191 (413)
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------cCHHH-HHHHHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999998776532 35763 5555565555554433 346
Q ss_pred cCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHH
Q 013318 220 RKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAV 298 (445)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~ 298 (445)
||++++++++ . +.++..++..+.+|||+++.....++.......-+....|..+.+ .+.+..+.++....
T Consensus 192 p~~~~~~~~~-----~----~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~ 262 (413)
T PRK15403 192 PETVKRGAVP-----F----SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVP 262 (413)
T ss_pred CCCccccCCC-----C----ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHH
Confidence 6543211111 0 011223345677899998876554443333221122333433332 24555677888777
Q ss_pred HHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhh--ccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHH
Q 013318 299 YGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN--YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL 376 (445)
Q Consensus 299 ~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l 376 (445)
...+..+++.+.+++.++..+++.. ..+..+..++.++.... ..++. +...++..+++++|.+...+...+..
T Consensus 263 ~~~~~~i~~~l~~~~~~~~~~~~~~-~~~~~~~~ig~~l~~~~~~~~~~~----~~~~~~~~~l~~~G~~~~~p~~~~~a 337 (413)
T PRK15403 263 VFGAVIVANAIVARFVKDPTEPRFI-WRAVPIQLVGLALLIVGNLLWPHV----WLWSVLGTSLYAFGIGLIFPTLFRFT 337 (413)
T ss_pred HHHHHHHHHHHHHHHhccCCchhHH-HHHHHHHHHHHHHHHHHHHHcccc----HHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 8888888888888866444333322 22222212221111111 11221 12245566677888777777665432
Q ss_pred HhhccCCchhhHHHHHHHHHHHHHHHHHhhcch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013318 377 GILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI---SLQAMLIVMVVGICVALVGILFLTIQVEKA 439 (445)
Q Consensus 377 ~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 439 (445)
-.-.+++++++.|++++.+..+...+....++. +....+....+++.+....++.-++|..|+
T Consensus 338 l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (413)
T PRK15403 338 LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLAGLLNRVRQ 403 (413)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 122222356677888888877666655444332 334444444444444444444444444443
No 43
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.92 E-value=3e-22 Score=198.56 Aligned_cols=349 Identities=13% Similarity=0.051 Sum_probs=208.7
Q ss_pred hhhhhhccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhh
Q 013318 49 NLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGF 123 (445)
Q Consensus 49 ~~~~~i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gi 123 (445)
+..|.+.++.+++.... +......++++++.|++.||+|||+++..+..+..+..... ..+++..++..|+++|+
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~ 91 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGL 91 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 44455555566665443 33444566788999999999999999999988777665554 56888888999999999
Q ss_pred hhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHH
Q 013318 124 AASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFI 203 (445)
Q Consensus 124 g~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~ 203 (445)
+.+..++...+++.++. ++++|++++|+.+....+|..+|+.++..+... .+|+. .|.
T Consensus 92 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----------~~~~~-~~~ 149 (377)
T PRK11102 92 AAAAASVVINALMRDMF----------PKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-----------FSWHA-IFW 149 (377)
T ss_pred HHHHHHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------cChHH-HHH
Confidence 99999988888998887 467899999999999999999999888766532 35653 444
Q ss_pred HHHHHHHHHHHH-HHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 013318 204 VFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI 282 (445)
Q Consensus 204 i~~~l~~~~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~ 282 (445)
+..++..+..++ .+++||++++++++ + .+.++..++..+.+|+|+.+....................+..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (377)
T PRK11102 150 VLALAAILAAALVFFFIPETLPKERRQ--P------FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVY 221 (377)
T ss_pred HHHHHHHHHHHHHHHhCCccCcccccC--C------CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 444444444333 34566543221111 0 01112223444567888776543332221111111112223222
Q ss_pred cc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHH-HHHHHHhhccCCCCccchhHHHHHHHH
Q 013318 283 VT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV-VFLWILINYSVTSGVLGTLYPLIMAAL 360 (445)
Q Consensus 283 ~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 360 (445)
.+ .+.+.++.|.+.....++.++++++.|++.||+++|+. +..+.++..+ +..+......+. . .....+...+
T Consensus 222 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~ 296 (377)
T PRK11102 222 IELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNM-LRFGLWIQFIMGIWLVVSALLDL-G---FWALVVGVAA 296 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH-HHHHHHHHHHHHHHHHHHHHHhh-h---HHHHHHHHHH
Confidence 22 35566678888899999999999999999999998874 3455443222 211111111111 1 1222233334
Q ss_pred HhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHH-HHHHHHHHHhhcch--hHHHHHHHHHHHHHHHHHHHHHH
Q 013318 361 LGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQ-CASIAVVFFIGPYI--SLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 361 ~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~-~~g~~ig~~i~~~~--~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
++.+.+...+.......+..|++++++.+.++... .+|..++..+.... .....+.+.+++.+.+.+.+++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (377)
T PRK11102 297 FVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLAPFTSAWPMVWSMAFCSILSILFYLYA 371 (377)
T ss_pred HHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 44444444445556677777877777777665543 35566666554321 22223333344444444444443
No 44
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.92 E-value=3.4e-22 Score=203.31 Aligned_cols=368 Identities=11% Similarity=0.025 Sum_probs=222.1
Q ss_pred hHHHHHHHHHHHHHHh---hhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHH
Q 013318 30 VHILSCAFLLIFLAYG---AAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (445)
Q Consensus 30 ~~~l~~~~~~~~~~~~---~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~ 102 (445)
++++..+++.....+. ......+.+.++.+.+... .+..+....++.++.|+++||+|||++++.+..+..+.
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~ 97 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLG 97 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHH
Confidence 4444455555544432 2334456666555555433 33344455678889999999999999999998777665
Q ss_pred HHHh-hhcchhhHHh-HHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 103 VAAN-LFPSWYTMVP-ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 103 ~~~~-~~~~~~~li~-~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
.+.. +.+++..++. .|+++|++.+..++...+++.++. +++|+++.|+..+...+|..+|+.+...+
T Consensus 98 ~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~-----------~~~r~~a~g~~~~~~~~g~~~~~~l~~~l 166 (455)
T TIGR00892 98 MILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYF-----------YRRRPLANGLAMAGSPVFLSTLAPLNQYL 166 (455)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHH-----------HhhHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 5543 5677777654 579999999987666667777775 46899999999999999999998887666
Q ss_pred hcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccC-Cccc---Ccc--ccccc--chhh--hhHHHHHHHHH--
Q 013318 181 LKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EEDK---GEK--ETADA--SVNF--YSYLVSLSKSI-- 248 (445)
Q Consensus 181 ~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~-~~~~---~~~--~~~~~--~~~~--~~~~~~~~~~~-- 248 (445)
... .+||. .|.+.+++.++..+..+++++ ++.. +++ +..+. ...+ .....+..++.
T Consensus 167 ~~~-----------~gwr~-~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (455)
T TIGR00892 167 FES-----------FGWRG-SFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLD 234 (455)
T ss_pred HHH-----------hChHH-HHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcc
Confidence 432 35764 455555555444443334332 2110 100 00000 0000 00001111111
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCC--CCccch-Hh
Q 013318 249 TTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL--PSITFI-VS 325 (445)
Q Consensus 249 ~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~--g~~~~~-i~ 325 (445)
.+.+|+|+++......+..++.......+++.+..+.+++..+.+.+.+..+++.++++++.|++.||. ++|+.. +.
T Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 314 (455)
T TIGR00892 235 FSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFS 314 (455)
T ss_pred hHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHH
Confidence 256788887765543333332211112233433333456666788888999999999999999999974 223222 11
Q ss_pred HHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHH
Q 013318 326 GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFF 404 (445)
Q Consensus 326 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~ 404 (445)
.+.++..++++ +....++ ...+++..+++|++.+...+..++++.+.+|++ +++++|+++..+++|..+|+.
T Consensus 315 ~~~~~~~l~~l--l~~~~~~-----~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~ 387 (455)
T TIGR00892 315 FALLFNGLTHL--LCALAGD-----YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPP 387 (455)
T ss_pred HHHHHHHHHHH--HHHHhch-----HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcccc
Confidence 22222222221 1222222 234556777889988888888889999999876 456889999999999888876
Q ss_pred hhcch-----hHHHHHHHHHHHHHHHHH
Q 013318 405 IGPYI-----SLQAMLIVMVVGICVALV 427 (445)
Q Consensus 405 i~~~~-----~~~~~~~i~~~~~~~~~~ 427 (445)
+.+.+ ++...+++.+++.+++.+
T Consensus 388 i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 388 LAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred ceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 66432 355666666665555544
No 45
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.92 E-value=1.8e-22 Score=206.78 Aligned_cols=348 Identities=12% Similarity=0.037 Sum_probs=195.5
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhh-------------hcchhhHHhHHHHhhhhhHHhhhh
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL-------------FPSWYTMVPASLYLGFAASIIWVG 131 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~-------------~~~~~~li~~r~l~Gig~g~~~~~ 131 (445)
.+......++++++.|++.||+|||++++++..++.+..+... .+.+..+++.|+++|++.|..++.
T Consensus 61 ~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~ 140 (479)
T PRK10077 61 VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASML 140 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhH
Confidence 4555566778999999999999999999999888766544321 122567788999999999999999
Q ss_pred hhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHH
Q 013318 132 EGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITL 211 (445)
Q Consensus 132 ~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~ 211 (445)
..++++|+. |+++||+++|+......+|..++++++..+..... +. .....+||. .|++.++..++
T Consensus 141 ~~~~i~e~~----------~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~--~~-~~~~~gWr~-~f~~~~~~~~~ 206 (479)
T PRK10077 141 SPMYIAEIA----------PAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGD--AS-WLNTDGWRY-MFASEAIPALL 206 (479)
T ss_pred HHHHHHhhC----------ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCc--cc-ccccCChHH-HHHHHHHHHHH
Confidence 999999998 46789999999998888898888777655432110 00 011357864 44444444444
Q ss_pred HHHHHHhccCCccc----Ccccccccch---hhhhHHHHHHHHHHHhhc-----cchhHHHHHHHHHHH-----HHHH--
Q 013318 212 GTILMCFLRKEEDK----GEKETADASV---NFYSYLVSLSKSITTLLA-----DVRMLLIIPLFAYSG-----LQQA-- 272 (445)
Q Consensus 212 ~~~l~~~l~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~l~-----~~~~~~l~~~~~~~g-----~~~~-- 272 (445)
..+..+++||+++. .++++.++.. ......++..++..+.++ .++.+......+..+ +...
T Consensus 207 ~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (479)
T PRK10077 207 FLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVG 286 (479)
T ss_pred HHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhC
Confidence 44444667765421 1111000000 000000111111111111 111111111111111 1110
Q ss_pred H-HHhhhcccc-cccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccc
Q 013318 273 F-VWAEFTKEI-VTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG 350 (445)
Q Consensus 273 f-~~~~~~~~~-~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~ 350 (445)
+ ....+.+.+ .+.+.+....+......++..++++++.|++.||++||+. +..+.++..++.+.......++..
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~-~i~~~~~~~v~~~~l~~~~~~~~~--- 362 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPL-QIIGALGMAIGMFSLGTAFYTQAP--- 362 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHhHHHHHHHHHHHHHHHhcCcc---
Confidence 0 011121222 2233333445556667888999999999999999998874 456666555543321111111111
Q ss_pred hhHHHHHHHHHhhhhhh-hhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----------hhHHHHHHHH
Q 013318 351 TLYPLIMAALLGIGDGV-LNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----------ISLQAMLIVM 418 (445)
Q Consensus 351 ~~~~~~~~~l~G~~~~~-~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----------~~~~~~~~i~ 418 (445)
.........+++++.+. +.+..++++.|.+|++ |+.+.|+.+..+.+|..++..+.|. .+..+.+++.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 442 (479)
T PRK10077 363 GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIY 442 (479)
T ss_pred cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHH
Confidence 12222333444444432 4467789999999876 5567888888888887766433332 2233455555
Q ss_pred HHHHHHHHHHHH
Q 013318 419 VVGICVALVGIL 430 (445)
Q Consensus 419 ~~~~~~~~~~~~ 430 (445)
.+.++++++...
T Consensus 443 ~~~~~~~~~~~~ 454 (479)
T PRK10077 443 GCMGVLAALFMW 454 (479)
T ss_pred HHHHHHHHHHHH
Confidence 555555554443
No 46
>PRK10504 putative transporter; Provisional
Probab=99.92 E-value=1.6e-21 Score=199.37 Aligned_cols=355 Identities=8% Similarity=-0.039 Sum_probs=223.9
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~ 100 (445)
+..++++.+.++.++...+........|.+.++.+.+... .+......++++++.|++.||+|||++++.+..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~ 86 (471)
T PRK10504 7 SVRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFT 86 (471)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 3455677777777777666665666677776666666543 233344556788999999999999999999887776
Q ss_pred HHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHH
Q 013318 101 LFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (445)
Q Consensus 101 ~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~ 179 (445)
+..+.+ ..+++..+++.|+++|+|.+..++...+++.++. |+++|+++.|+.....++|..+|++++..
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~g~ 156 (471)
T PRK10504 87 LGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIV----------PREQYMAAMTFVTLPGQVGPLLGPALGGL 156 (471)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 655543 5688888899999999999999988888888887 46789999999999899999999998877
Q ss_pred hhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHH-hccCCcccC-ccccccc--------------chhhh---hH
Q 013318 180 VLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKG-EKETADA--------------SVNFY---SY 240 (445)
Q Consensus 180 l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~-~l~~~~~~~-~~~~~~~--------------~~~~~---~~ 240 (445)
+..+ .+||. .|.+...+..++.++.. ..|+++.++ +.|.... +..+. ..
T Consensus 157 l~~~-----------~gw~~-~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (471)
T PRK10504 157 LVEY-----------ASWHW-IFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSP 224 (471)
T ss_pred HHhh-----------ccHHH-HHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcch
Confidence 7543 25754 44444444444444333 334322111 1110000 00000 00
Q ss_pred ------------------HHH----HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhccccc-ccccccchhHHHHH
Q 013318 241 ------------------LVS----LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMA 297 (445)
Q Consensus 241 ------------------~~~----~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~ 297 (445)
.++ ......+++|||++.......+..+..........+.++. ..+.+....++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 304 (471)
T PRK10504 225 LAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMI 304 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 000 0000135678888876554444433322111111221111 13445557788888
Q ss_pred HHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHH
Q 013318 298 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 377 (445)
Q Consensus 298 ~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~ 377 (445)
...++.+++.++.|++.||+++|+. +..+.++..+...+ +.+.+.... .....+..++.|++.+...+..+++..
T Consensus 305 ~~~~~~~~~~~~~~~l~~r~g~~~~-~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~ 379 (471)
T PRK10504 305 PMVLGSMGMKRIVVQVVNRFGYRRV-LVATTLGLALVSLL--FMLVALLGW--YYLLPFVLFLQGMVNSTRFSSMNTLTL 379 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchHH-HHHHHHHHHHHHHH--HHhcccccc--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999998874 45565544443321 122221111 122334556677877777777888888
Q ss_pred hhccCC-chhhHHHHHHHHHHHHHHHHHhh
Q 013318 378 ILFKHD-TEGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 378 ~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
+..|++ ++.++|.+++.+.+|..+|..+.
T Consensus 380 ~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~ 409 (471)
T PRK10504 380 KDLPDNLASSGNSLLSMIMQLSMSIGVTIA 409 (471)
T ss_pred HcCCHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 888876 44578998998888877765554
No 47
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.92 E-value=9.9e-22 Score=196.68 Aligned_cols=334 Identities=11% Similarity=0.049 Sum_probs=207.3
Q ss_pred hHHHHHHHHHHHHHHhhhHh-hhhhhccCCCCchHHHHHHHHHH----HHhhhhHHHHHHHhCcchhhhhhhHHHHHHHH
Q 013318 30 VHILSCAFLLIFLAYGAAQN-LETTVNTEGNLGTISLGILYTSF----TCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (445)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~-~~~~i~~~~~~g~~~~~~~~~~~----ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~ 104 (445)
.+.+ ...++...+.....+ +.+.+.++.+++....+...... .+.+++.|+++||+|||+++.++.+...+..+
T Consensus 13 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLL-IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3444 333333333333333 33344556677776666655543 34568899999999999999999988877666
Q ss_pred Hh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcC
Q 013318 105 AN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (445)
Q Consensus 105 ~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~ 183 (445)
.. ..++++.+++.|+++|++.+..+++..+++.++. |+++|++++|+.....++|..+|++++..+. .
T Consensus 92 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~ 160 (400)
T PRK11646 92 TMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLI----------RPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q 160 (400)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 54 5678888889999999999998888888888886 4679999999999999999999999988775 2
Q ss_pred ccccccccCCCCCcchhHHHHHHHHHHHHHHH-HHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHH
Q 013318 184 DKVCAALLGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP 262 (445)
Q Consensus 184 ~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 262 (445)
++|+. .|.+.+++.++..++ .+++|++++++ + + .+.++ +..+.+|+|+++....
T Consensus 161 -----------~g~~~-~f~~~~~~~~~~~i~~~~~~~~~~~~~--~--~------~~~~~---~~~~~~~~~~~~~~~~ 215 (400)
T PRK11646 161 -----------YDFRL-VCATGAVLFVLAAAFNAWLLPAYKLST--V--R------TPVRE---GMTRVLRDKRFVTYVL 215 (400)
T ss_pred -----------hhHHH-HHHHHHHHHHHHHHHHHHhCCcccccc--c--c------hhhHH---HHHHHHcCchHHHHHH
Confidence 24653 344444433333332 23444322111 0 0 01111 2335677888764433
Q ss_pred HHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccC-CCCccchHhHHHHHHHHHHHHHHhh
Q 013318 263 LFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILIN 341 (445)
Q Consensus 263 ~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~-~g~~~~~i~~g~~~~~~~~~~~~~~ 341 (445)
.++............+|.+..+.+.+..+.+...+..++....+....+++.|| .+.++ .+..+.++..++.. ++.
T Consensus 216 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~~~~~~~~--~l~ 292 (400)
T PRK11646 216 TLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH-RLMAGLLIMSLSMF--PIG 292 (400)
T ss_pred HHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-HHHHHHHHHHHHHH--HHH
Confidence 222111111111223443333333445567877777777776666666666654 54444 33455544444432 223
Q ss_pred ccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc
Q 013318 342 YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 408 (445)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~ 408 (445)
..++ .....+..++++++.+...|...+++.+..|++ +++++|.+++...+|..+|+.+.+.
T Consensus 293 ~~~~-----~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~ 355 (400)
T PRK11646 293 MVSN-----LQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGW 355 (400)
T ss_pred Hhhh-----HHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHH
Confidence 3332 123444556778888888888889999999865 5668899999998888887655543
No 48
>PRK15075 citrate-proton symporter; Provisional
Probab=99.92 E-value=2.8e-22 Score=202.92 Aligned_cols=346 Identities=12% Similarity=0.038 Sum_probs=192.3
Q ss_pred hHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH-----H--HHH---HHHHHHhhhhHHHHHHHhCcchhhhhhhHHH
Q 013318 30 VHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS-----L--GIL---YTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (445)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~-----~--~~~---~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~ 99 (445)
...+.++.++.+.++.......|.+.+|.+.+... . ..+ +....+++++.|++.||+|||++++.+..++
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~ 96 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIM 96 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHH
Confidence 44444555556666666666777776554433211 1 111 1122467899999999999999999999988
Q ss_pred HHHHHHh-hhcchh--------hHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhh
Q 013318 100 WLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ 170 (445)
Q Consensus 100 ~~~~~~~-~~~~~~--------~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~ 170 (445)
++..+.. +.+++. .+++.|+++|++.+..+++...+++|+. |+++||++++++....++|.
T Consensus 97 ~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~----------p~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 97 ASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIA----------TPGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhC----------CcccchHHHHHHHHHHHHHH
Confidence 7776654 566665 3578999999999999998889999998 57899999999988888888
Q ss_pred hhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHH
Q 013318 171 FVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITT 250 (445)
Q Consensus 171 ~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (445)
.+|+.++..+...... .....++||. .|.+ .++ .. +..+++++..++.++..++ + .+.+.++..+ +
T Consensus 167 ~~g~~~g~~l~~~~~~---~~~~~~gWr~-~f~~-~~~--~~-~~~~~~~~~~~e~~~~~~~-~--~~~~~~~~~~---~ 232 (434)
T PRK15075 167 VFAALLGYLLNQWLSP---AQMAEWGWRI-PFLI-GCL--IV-PFIFLIRRSLEETEEFLAR-K--HRPSMREIFR---S 232 (434)
T ss_pred HHHHHHHHHHHHhCCH---HHHhccchHH-HHHH-HHH--HH-HHHHHHHHhcCCCHHHHHh-h--hccccccHHH---H
Confidence 8888776655322110 0001357874 3332 111 11 1122233211111000000 0 0001111111 2
Q ss_pred hhccchhHHHHHH-HHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHH
Q 013318 251 LLADVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA 328 (445)
Q Consensus 251 ~l~~~~~~~l~~~-~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~ 328 (445)
..|+++.+..... .+...........+.|.++.+ .+++..+.++....++++.++++++.|+++||++||+.. ..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~-~~~~ 311 (434)
T PRK15075 233 LAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVL-IAFT 311 (434)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH-HHHH
Confidence 2344444332211 111111111222334433322 355555677778889999999999999999999988754 3433
Q ss_pred HHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHH-HHHHHHHHHHHHH
Q 013318 329 IAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQCASIAVVF 403 (445)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~-~~~~~~~g~~ig~ 403 (445)
++..+.....+....++++ .........+.+++.+...+..+.+..|.+|++.+ .+.++ ++..+.++..+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p 385 (434)
T PRK15075 312 VLAILTAYPALSWLVAAPS---FARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTP 385 (434)
T ss_pred HHHHHHHHHHHHHHHcCCc---hHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHH
Confidence 3322211111111111221 12222333444566666666667888999998754 45665 3444444333333
No 49
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.91 E-value=3.1e-23 Score=211.08 Aligned_cols=347 Identities=13% Similarity=0.055 Sum_probs=198.3
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-h---hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhh
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L---FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~---~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~ 140 (445)
.+..+...++++++.|++.||+|||++++++.+++.+..... . ..++..+++.|+++|+|.+..++....+++++.
T Consensus 77 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 156 (481)
T TIGR00879 77 VSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIA 156 (481)
T ss_pred HHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccC
Confidence 455666778899999999999999999999998877655543 2 234457888999999999999999899999987
Q ss_pred hhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHH---HHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHH
Q 013318 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT---LAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMC 217 (445)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~---~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~ 217 (445)
++++|+++++++.....+|..+|++++ .... ...+||. .|.+..+..++..+..+
T Consensus 157 ----------~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~-----------~~~~w~~-~f~~~~~~~~~~~~~~~ 214 (481)
T TIGR00879 157 ----------PKALRGALTSLYQLAITFGILVAYGFGSGKVSLN-----------NTLGWRI-PLGLQLIPAGLLFLGLF 214 (481)
T ss_pred ----------ChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCC-----------CCccHHH-HHHHHHHHHHHHHHHHh
Confidence 578999999999999999999999887 2211 1246764 44443333333334445
Q ss_pred hccCCccc----Cccccccc---c----hhhhhHHHH------------------HHHHHHHhhcc--chhHHHHHHHHH
Q 013318 218 FLRKEEDK----GEKETADA---S----VNFYSYLVS------------------LSKSITTLLAD--VRMLLIIPLFAY 266 (445)
Q Consensus 218 ~l~~~~~~----~~~~~~~~---~----~~~~~~~~~------------------~~~~~~~~l~~--~~~~~l~~~~~~ 266 (445)
++||+++. ++++..++ + ..+.....+ ..++.++..++ ++........++
T Consensus 215 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (481)
T TIGR00879 215 FLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWF 294 (481)
T ss_pred cCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHH
Confidence 66664321 00000000 0 000000000 00111111111 111111111111
Q ss_pred HHHHHHHHHhhhcccc-cccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHH-hhccC
Q 013318 267 SGLQQAFVWAEFTKEI-VTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSV 344 (445)
Q Consensus 267 ~g~~~~f~~~~~~~~~-~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~-~~~~~ 344 (445)
...........+.+.+ .+.+++....+......+++.++++++.|++.||++||+.. ..+.++..+++++.. .....
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 373 (481)
T TIGR00879 295 QQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL-LIGAAGMAICLFVLGILGASF 373 (481)
T ss_pred HHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH-HHHHHHHHHHHHHHHHHhhcc
Confidence 1110000011122222 22345555667778888999999999999999999988744 455555444432211 11111
Q ss_pred CCCc--cchhHHHHHHHHHhhh-hhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHH
Q 013318 345 TSGV--LGTLYPLIMAALLGIG-DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLI 416 (445)
Q Consensus 345 ~~~~--~~~~~~~~~~~l~G~~-~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~ 416 (445)
.... ......+....+++.+ .....+...+++.|.+|++ ++.+.+..+....+|..++..+.+. .++.+.++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~ 453 (481)
T TIGR00879 374 VTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFI 453 (481)
T ss_pred cCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceeh
Confidence 1100 0001122222222222 2234466667789999876 4567888888888888777655543 24556667
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013318 417 VMVVGICVALVGILFLTI 434 (445)
Q Consensus 417 i~~~~~~~~~~~~~~~~~ 434 (445)
+++++++++++...+..+
T Consensus 454 ~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 454 FFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred hHHHHHHHHHHHHheecc
Confidence 777777777666654443
No 50
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=3.4e-22 Score=204.93 Aligned_cols=350 Identities=10% Similarity=0.024 Sum_probs=220.3
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh
Q 013318 31 HILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN 106 (445)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~ 106 (445)
+.+.++.++...+........|.+.++.+.+... .+......+++.++.|++.||+|||+++.++..++.+.....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444445566666555554332 344455667788899999999999999999998887766654
Q ss_pred -hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCcc
Q 013318 107 -LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK 185 (445)
Q Consensus 107 -~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~ 185 (445)
..+++..+++.|+++|++.+...+...+++.++. |+++|+++++++.....+|..+|+.++..+..+
T Consensus 85 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-- 152 (485)
T TIGR00711 85 GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIY----------PPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN-- 152 (485)
T ss_pred hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC--
Confidence 6789999999999999999999999999999997 467999999999999999999999988776533
Q ss_pred ccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccc--------------------cchh--hhhHHH
Q 013318 186 VCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETAD--------------------ASVN--FYSYLV 242 (445)
Q Consensus 186 ~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~--------------------~~~~--~~~~~~ 242 (445)
.+||. .|.+...+.++..++. +++|+++++++++.+. .+.. ......
T Consensus 153 ---------~~w~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (485)
T TIGR00711 153 ---------YHWRW-IFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEIL 222 (485)
T ss_pred ---------cCcee-hhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 35764 3444444444443333 3455432221111000 0000 000000
Q ss_pred ---------------HHHH-----HHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHH
Q 013318 243 ---------------SLSK-----SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGA 301 (445)
Q Consensus 243 ---------------~~~~-----~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i 301 (445)
++.+ ...+.+|+|+++......+..++........+|.++.+ .+.+..+.|..+...++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~ 302 (485)
T TIGR00711 223 ILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGL 302 (485)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 0000 01245677777655443333333211111223333221 34566678888899999
Q ss_pred HHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhcc
Q 013318 302 FDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK 381 (445)
Q Consensus 302 ~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~ 381 (445)
+..+++++.|++.||+++|+ ++..+..+..++..+......++.+ ........++.|++.+...+.......+..|
T Consensus 303 ~~~~~~~~~g~l~~r~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~ 378 (485)
T TIGR00711 303 APMLSSPIAGRMGDKIDPRK-LVTIGLILYAVGFYWRAFTFTPDTP---FLAIALPQFIRGFGMGCFFMPLTTIALSGLP 378 (485)
T ss_pred HHHHHHHHHHHHHhhcCcHH-HHHHHHHHHHHHHHHHhccCCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999887 4456665555544321111222222 2334455677888888777666666667777
Q ss_pred CC-chhhHHHHHHHHHHHHHHHHHhh
Q 013318 382 HD-TEGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 382 ~~-~~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
++ ++.+.|++++.+.+|..+|..+.
T Consensus 379 ~~~~g~~~~~~~~~~~~g~~ig~~i~ 404 (485)
T TIGR00711 379 PHKIARGSSLSNFTRQLGGSIGTALI 404 (485)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 55 45678999999998888876554
No 51
>TIGR00895 2A0115 benzoate transport.
Probab=99.91 E-value=2.9e-22 Score=199.24 Aligned_cols=333 Identities=15% Similarity=0.084 Sum_probs=206.2
Q ss_pred hhhHhhhhhhccCCCCchHHHHH----HHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhhcchhhHHhHHH
Q 013318 45 GAAQNLETTVNTEGNLGTISLGI----LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASL 119 (445)
Q Consensus 45 ~~~~~~~~~i~~~~~~g~~~~~~----~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~ 119 (445)
.......|.+.++.+.+....+. ......+++++.|++.||+|||+.+..+..+..+.... ...+++..+++.|+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (398)
T TIGR00895 34 AAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRF 113 (398)
T ss_pred HHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 33445566776666666544333 33455678889999999999999999998877665554 35688888889999
Q ss_pred HhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcch
Q 013318 120 YLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTT 199 (445)
Q Consensus 120 l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~ 199 (445)
+.|++.+..++...+++.++. ++++|++++|+......+|..+|+.++..+... .+|+.
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----------~g~~~ 172 (398)
T TIGR00895 114 LAGLGLGGLMPNLNALVSEYA----------PKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV-----------FGWRS 172 (398)
T ss_pred HHhcccccchhhHHHHHHHHc----------CHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-----------cccee
Confidence 999999999999999999987 467899999999999999999999888766533 24654
Q ss_pred hHHHHHHHHHHHH-HHHHHhccCCccc---Cccccc---------------ccchhhhhHHHHHHHHHHHhhccc----h
Q 013318 200 LLFIVFLGVITLG-TILMCFLRKEEDK---GEKETA---------------DASVNFYSYLVSLSKSITTLLADV----R 256 (445)
Q Consensus 200 ~~~~i~~~l~~~~-~~l~~~l~~~~~~---~~~~~~---------------~~~~~~~~~~~~~~~~~~~~l~~~----~ 256 (445)
.+.+.+++..+. .+...++|++++. ++++.. +++..+.....+..++..+.++++ +
T Consensus 173 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (398)
T TIGR00895 173 -LFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARI 251 (398)
T ss_pred -ehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHH
Confidence 333333333333 3333556654321 100000 000000000000111222222222 2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHH
Q 013318 257 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 336 (445)
Q Consensus 257 ~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~ 336 (445)
.+.+...++...........+.+....+.+.+.+..+......+++.++++++.|++.||+++|+ ......+....+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ 330 (398)
T TIGR00895 252 TVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV-TALLLLLGAVFAVL 330 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH-HHHHHHHHHHHHHH
Confidence 22222222211111112222333222234555567888888999999999999999999999873 33332222222221
Q ss_pred HHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhc
Q 013318 337 WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP 407 (445)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~ 407 (445)
+....++ ....+...+++|++.+...+..++++.+.+|++. +.++|+++....+|..+|+.+.+
T Consensus 331 --~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G 395 (398)
T TIGR00895 331 --VGSTLFS-----PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAG 395 (398)
T ss_pred --HHHHhhC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 1111222 2345667778899988888889999999998764 55789998988899888876654
No 52
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.91 E-value=2e-22 Score=198.77 Aligned_cols=354 Identities=13% Similarity=0.094 Sum_probs=206.5
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhh-hccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~-i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~ 102 (445)
++.+...+++++.+..+.....+.|. +.++.+++.... +......++++++.|++.||+|||+++.++.++..+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 1 RNLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIP 80 (366)
T ss_pred CchHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 34566777777777777777777774 666667766543 3444466788899999999999999999999887776
Q ss_pred HHHh-hhc-chhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 103 VAAN-LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 103 ~~~~-~~~-~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
.... ..+ ++..+++.|+++|++.+. ++....+++++. ++++|+++.+++....++|..+|+.++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 81 CLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFF----------PKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhc----------CHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6554 567 889999999999999765 455567788886 467899999999888888888887776554
Q ss_pred hcCccccccccCCCCCcchhHHHHHHHHHHHHHH-HHHhccCCcccCccccc-ccchhhhhHHHHHHHHHHHhhccchhH
Q 013318 181 LKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKGEKETA-DASVNFYSYLVSLSKSITTLLADVRML 258 (445)
Q Consensus 181 ~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~-l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 258 (445)
......... -....+||...+....++..+..+ ...+.++.+++++++.+ +.+.......++..++..+.+++|+++
T Consensus 150 ~~~~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (366)
T TIGR00886 150 IGSLIFGAG-LPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTW 228 (366)
T ss_pred HHHHHhccc-ccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchh
Confidence 431100000 001235764332333333332222 23344442221111100 000000000011122345677888876
Q ss_pred HHHHHHHHH-HHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHH
Q 013318 259 LIIPLFAYS-GLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 336 (445)
Q Consensus 259 ~l~~~~~~~-g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~ 336 (445)
......+.. +.... ....++.++.+ .+.+..+.+.......+..++++++.|++.||+++|+.. ..+.....++..
T Consensus 229 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-~~~~~~~~~~~~ 306 (366)
T TIGR00886 229 ILALLYSVTFGSFLG-VSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL-LMSFLGVAMGAF 306 (366)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH-HHHHHHHHHHHH
Confidence 554433322 21111 12333333322 244556778888888999999999999999999987643 344433333322
Q ss_pred HHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHH
Q 013318 337 WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCAS 398 (445)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g 398 (445)
+......++.+ ....+....+.++..+...+..+++++++.|+++++++|+.+....+|
T Consensus 307 ~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 307 LVVLGLVSPLS---LAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHhcCCCcch---HHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 11112221101 122223333333334444455567788888888888888888776554
No 53
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.91 E-value=7.1e-22 Score=200.19 Aligned_cols=359 Identities=10% Similarity=-0.013 Sum_probs=205.7
Q ss_pred hhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hh----cchhhHHhHHH
Q 013318 49 NLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF----PSWYTMVPASL 119 (445)
Q Consensus 49 ~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~----~~~~~li~~r~ 119 (445)
...|.+.+ .+.+... .+..+....+++++.|++.||+|||+.+..+.++.++..... .. +++..+.+.|+
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 126 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLF 126 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHH
Confidence 34454443 3555443 344455667788999999999999999999887776654432 22 45667778899
Q ss_pred HhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcch
Q 013318 120 YLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTT 199 (445)
Q Consensus 120 l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~ 199 (445)
+.|++.+..++....++.++. |+++||+++|+++...++|..+++.+........ .+||.
T Consensus 127 l~g~~~g~~~~~~~~~i~~~~----------~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~----------~~w~~ 186 (438)
T TIGR00712 127 LNGWFQGMGWPPCGRTMVHWW----------SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF----------NDWHA 186 (438)
T ss_pred HHHHHhhcchHHHHHHHHHhc----------CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh----------hhhHH
Confidence 999999999888888888886 5788999999999999999988887655432211 25764
Q ss_pred hHHHHHHHHHHHHHH-HHHhccCCcccC---ccc---cc--cc--chhh-hhHHHHHHHHHHHhhccchhHHHHHHHHHH
Q 013318 200 LLFIVFLGVITLGTI-LMCFLRKEEDKG---EKE---TA--DA--SVNF-YSYLVSLSKSITTLLADVRMLLIIPLFAYS 267 (445)
Q Consensus 200 ~~~~i~~~l~~~~~~-l~~~l~~~~~~~---~~~---~~--~~--~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 267 (445)
.|.+.+++.++..+ ..+++||+++++ +.+ .+ +. ++.+ +.+.++... .+.+|+++++......++.
T Consensus 187 -~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 263 (438)
T TIGR00712 187 -ALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFM--QYVLPNKLLWYIAIANVFV 263 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHH--HHHccCchHHHHHHHHHHH
Confidence 45554555444333 335566543211 000 00 00 0000 001111111 1357888887664433332
Q ss_pred HHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHH-HHHhhccCC
Q 013318 268 GLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSVT 345 (445)
Q Consensus 268 g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~-~~~~~~~~~ 345 (445)
.........+.|.++.+ .+++..+.+.+...++++.++++++.|++.||.++++... .+..+.....+ .......+.
T Consensus 264 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 342 (438)
T TIGR00712 264 YLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGA-TGVFFMTLVTIAVIVYWMNPA 342 (438)
T ss_pred HHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccH-HHHHHHHHHHHHHHHHHhcCC
Confidence 22111122344444432 3556667788888899999999999999999996543232 23222111111 111111111
Q ss_pred CCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHH-HHHHHHhhc----chhHHHHHHHHH
Q 013318 346 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCAS-IAVVFFIGP----YISLQAMLIVMV 419 (445)
Q Consensus 346 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g-~~ig~~i~~----~~~~~~~~~i~~ 419 (445)
.. ........+.+|++.............+.+|++ ++++.|+++....+| .++++.+.+ ..++...+++++
T Consensus 343 ~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~ 419 (438)
T TIGR00712 343 GN---PLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMI 419 (438)
T ss_pred Cc---hHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHH
Confidence 11 122223333444432222222234567888865 556888887776655 345544332 335677778777
Q ss_pred HHHHHHHHHHHHHHHH
Q 013318 420 VGICVALVGILFLTIQ 435 (445)
Q Consensus 420 ~~~~~~~~~~~~~~~~ 435 (445)
+..+++.+..+++.++
T Consensus 420 ~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 420 GGSILAVILLIVVMIG 435 (438)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 7777777666655443
No 54
>PRK10054 putative transporter; Provisional
Probab=99.91 E-value=1.7e-21 Score=194.59 Aligned_cols=354 Identities=14% Similarity=0.112 Sum_probs=220.6
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhh-hhccCCCCchHHHHHHH----HHHHHhhhhHHHHHHHhCcchhhhhhhHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLET-TVNTEGNLGTISLGILY----TSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~i~~~~~~g~~~~~~~~----~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~ 99 (445)
..+|+++.+.++.++...++....++.+ .+.++.+.+....+... ....+++++.|+++||+|+|+++.++....
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~ 83 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAF 83 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHH
Confidence 4566777777888887777766665544 44455677765544433 345667889999999999999999998877
Q ss_pred HHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHH
Q 013318 100 WLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (445)
Q Consensus 100 ~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~ 178 (445)
.+..+.. +.+++..++..|.+.|.+.+...+...++..+.. ++++|++++|+.....++|..+||.++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~lg~~igp~l~~ 153 (395)
T PRK10054 84 ASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNL----------SSTSKTKIFSLNYTMLNIGWTVGPPLGT 153 (395)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6654443 6778888888898988888877777777776665 4678999999999999999999999988
Q ss_pred HhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchh
Q 013318 179 AVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRM 257 (445)
Q Consensus 179 ~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (445)
.+.. . +|+. .|.+.+++.+++.++. +++|+++++++++ + ++. ++..+.+|+|++
T Consensus 154 ~l~~-~-----------g~~~-~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~--~-----~~~-----~~~~~~~~~~~~ 208 (395)
T PRK10054 154 LLVM-Q-----------SINL-PFWLAAICSAFPLVFIQIWVQRSEKAIATE--T-----GSV-----WSPSVLLQDKAL 208 (395)
T ss_pred HHHH-h-----------ccCc-HHHHHHHHHHHHHHHHHHHHhccccccccc--h-----hhh-----hhhhhhccCcee
Confidence 7652 1 3654 3445555555544333 3455432211111 0 000 112456788888
Q ss_pred HHHHHHHHHHHHHHHH---HHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHH
Q 013318 258 LLIIPLFAYSGLQQAF---VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV 334 (445)
Q Consensus 258 ~~l~~~~~~~g~~~~f---~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~ 334 (445)
+......+...+.... +...+.....+.+.+....+.+....++.....+...|++.||.++|+ .+..+.++..+.
T Consensus 209 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~l~~~~~~~~~~ 287 (395)
T PRK10054 209 LWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRP-LMTAGTLCFVIG 287 (395)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchh-HHHHHHHHHHHH
Confidence 7655433332222111 112222222222333345677777777777777788899999998876 445565555444
Q ss_pred HHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcc----h
Q 013318 335 FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----I 409 (445)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~----~ 409 (445)
+.. .....++ .....+...++|++.+...|..++.+.+..|++. +++++.++ ...+|..+|+.+.+. .
T Consensus 288 ~~~--~~~~~~~----~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~ 360 (395)
T PRK10054 288 LVG--FIFSGNS----LLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL 360 (395)
T ss_pred HHH--HHHcchH----HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc
Confidence 321 2222121 2344556778899988888888889999998764 44667554 334566666655533 3
Q ss_pred hHHHHHHHHHHH
Q 013318 410 SLQAMLIVMVVG 421 (445)
Q Consensus 410 ~~~~~~~i~~~~ 421 (445)
++...+.+++++
T Consensus 361 g~~~~~~~~~~~ 372 (395)
T PRK10054 361 PPWSLFVILALA 372 (395)
T ss_pred ChhhHHHHHHHH
Confidence 444445444333
No 55
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.91 E-value=2.1e-22 Score=198.75 Aligned_cols=345 Identities=12% Similarity=0.013 Sum_probs=208.2
Q ss_pred HHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcc
Q 013318 36 AFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPS 110 (445)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~ 110 (445)
++++.+..+.......|.+.++.+.+... .+.......+++++.|++.||+|||+++.++.++..+..+.. ..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 82 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS 82 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh
Confidence 34455556666666667776665665544 344445667788999999999999999999998877766554 5688
Q ss_pred hhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhh-HHHHHhhcCcccccc
Q 013318 111 WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN-LITLAVLKDDKVCAA 189 (445)
Q Consensus 111 ~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~-li~~~l~~~~~~~~~ 189 (445)
+..+++.|++.|++.+..++...+++.++. ++++|++++|+......+|..+|+ +++..+...
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------ 146 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWF----------SRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL------ 146 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhc----------CHhhheeeEeehhccchhHHHHHHHHHHHHHHhc------
Confidence 899999999999999999999999999997 467899999999999999999998 455544322
Q ss_pred ccCCCCCcchhHHHHHHHHHHHHHHH-HHhccCCcccCc---cccc--cc-c--hh-hhhHHHHHHHHHHHhhccchhHH
Q 013318 190 LLGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGE---KETA--DA-S--VN-FYSYLVSLSKSITTLLADVRMLL 259 (445)
Q Consensus 190 ~~~~~~~w~~~~~~i~~~l~~~~~~l-~~~l~~~~~~~~---~~~~--~~-~--~~-~~~~~~~~~~~~~~~l~~~~~~~ 259 (445)
.+||. .|.+.+++.++..++ .++.|++++.++ ++.. ++ + .. ++.+.++......+.+|+|.++.
T Consensus 147 -----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (379)
T TIGR00881 147 -----YSWHW-VFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWY 220 (379)
T ss_pred -----CCchh-HHHHHHHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHH
Confidence 35654 344444444433333 334554322110 0000 00 0 00 00000011112334567887766
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCC-ccchHhHHH-HHHHHHHH
Q 013318 260 IIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPS-ITFIVSGGA-IAQVVVFL 336 (445)
Q Consensus 260 l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~-~~~~i~~g~-~~~~~~~~ 336 (445)
+....+...........+.+.++.+ .+.+..+.+......+++.++++++.|++.||..+ |+..+.... ....++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
T TIGR00881 221 ISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLL 300 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Confidence 5543333322222222333433322 24555678888889999999999999999998643 332211111 11111111
Q ss_pred HHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhc
Q 013318 337 WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP 407 (445)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~ 407 (445)
.....+..+ .....+..++.|+......+....+..+.+|++. +.+.|+++....+|..+++.+.+
T Consensus 301 --~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 367 (379)
T TIGR00881 301 --VYWLNPAAN---PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLG 367 (379)
T ss_pred --HHhcCcchh---HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHH
Confidence 111111111 1233444555666544455556678889998764 55789999888888877765554
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.90 E-value=6.1e-21 Score=190.44 Aligned_cols=326 Identities=11% Similarity=0.041 Sum_probs=194.6
Q ss_pred HHhhhHhhhhhhccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhH
Q 013318 43 AYGAAQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPA 117 (445)
Q Consensus 43 ~~~~~~~~~~~i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~ 117 (445)
+.+......|.+.++.+.+.... +.......+++++.|++.||+|||+.+.++..+..+..... ..+++..+++.
T Consensus 18 ~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 97 (392)
T PRK10473 18 GIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAG 97 (392)
T ss_pred HHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 33333345566655555555433 33444566788999999999999999999988777665544 56788888889
Q ss_pred HHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCc
Q 013318 118 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSG 197 (445)
Q Consensus 118 r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w 197 (445)
|+++|++.+..++...+++.++. ++++|+++.|+.+....++..+|++++..+... .+|
T Consensus 98 ~~l~g~~~~~~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~-----------~g~ 156 (392)
T PRK10473 98 RFLQGIGAGCCYVVAFAILRDTL----------DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK-----------FPW 156 (392)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------cCh
Confidence 99999999999988888998887 467999999999998889999999887765432 356
Q ss_pred chhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 013318 198 TTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA 276 (445)
Q Consensus 198 ~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~ 276 (445)
+. .+.+..++.++..++. +++||++++++++ + . + ..++..+.+|+++++..................
T Consensus 157 ~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~-----~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (392)
T PRK10473 157 QS-LFYTMAAMGILVLLLSLFILKETRPARAPA--A-----S-S---KPRENSESLLNRFFLSRLVITTLSVTVILTFVN 224 (392)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHcCCCCCcccCC--c-----c-c---hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 4445454444444333 4455543221111 0 0 0 011233456777765433322211111111112
Q ss_pred hhccccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHH
Q 013318 277 EFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPL 355 (445)
Q Consensus 277 ~~~~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (445)
..+..+. +.+++..+.+..++..+++.++++++.|++.||+++|+. +..+.++..++.+. +...++. ...+
T Consensus 225 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~-~~~~~~~~~~~~~~--~~~~~~~-----~~~~ 296 (392)
T PRK10473 225 TSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTL-MLTSQVLFLAAGIT--LALSPSH-----AVSL 296 (392)
T ss_pred hCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-HHHHHHHHHHHHHH--HHHHHHH-----HHHH
Confidence 2222221 234555567888889999999999999999999998874 45555544443321 1222221 1222
Q ss_pred HHHHHHhhhhhhhhhhhhHHHHhhccCCc-hh-hHHHHHHHHHHHHHHHHHhhcchhH
Q 013318 356 IMAALLGIGDGVLNTQLSALLGILFKHDT-EG-AFAQLKVWQCASIAVVFFIGPYISL 411 (445)
Q Consensus 356 ~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~-a~~~~~~~~~~g~~ig~~i~~~~~~ 411 (445)
....+.+.+.+...+. ....++.|+++ ++ +.+.....+.+|..++..+.+..+.
T Consensus 297 ~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~g~ 352 (392)
T PRK10473 297 FGITLICAGFSVGFGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGI 352 (392)
T ss_pred HHHHHHHHHHHHHhHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2223333332222222 22334455443 33 5567777777887776655554443
No 57
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=1.1e-20 Score=187.04 Aligned_cols=351 Identities=16% Similarity=0.054 Sum_probs=209.3
Q ss_pred HHHHHHHhhhHhhhhh-hccCCCCchHHHHHHHHH----HHHhhhhHHHHHHHhCcchhhhhhh-HHHHHHHHH-hhhcc
Q 013318 38 LLIFLAYGAAQNLETT-VNTEGNLGTISLGILYTS----FTCFSLVASLVVRVLGSKNALILGT-TGYWLFVAA-NLFPS 110 (445)
Q Consensus 38 ~~~~~~~~~~~~~~~~-i~~~~~~g~~~~~~~~~~----~ai~~l~~g~l~dr~G~k~~l~~g~-~~~~~~~~~-~~~~~ 110 (445)
++...+........|. +.++.+.+....+..... ..+.+++.|++.||+||||.+++.. ....+.... ...++
T Consensus 7 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 86 (375)
T TIGR00899 7 FLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRN 86 (375)
T ss_pred HHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcch
Confidence 3334444444444443 445567666555544443 3457788999999999999876544 443444333 35688
Q ss_pred hhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhh--hhhHHHHHHHHhhhhhhHHHHHhhcCccccc
Q 013318 111 WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGS--FNGEFWGMFASHQFVGNLITLAVLKDDKVCA 188 (445)
Q Consensus 111 ~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~--~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~ 188 (445)
+..+++.|+++|.+.+...+...++..++.+ +++|++ ..+......++|.++|++++..+...
T Consensus 87 ~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~----- 151 (375)
T TIGR00899 87 YFLLLVLGVLLSSFASTANPQLFALAREHAD----------RTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG----- 151 (375)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhh----------hcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-----
Confidence 8888888999998887777776677766653 334443 35777777889999999888776532
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHH
Q 013318 189 ALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS 267 (445)
Q Consensus 189 ~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 267 (445)
.+||. .|.+.+++.++..++. +++||++++++++ + + .. +..+.+++|+++.+....+..
T Consensus 152 ------~~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~---~~-------~~~~~~~~~~~~~~~~~~~~~ 211 (375)
T TIGR00899 152 ------FGFTV-MFLTAALAFVLCGVLVWLFLPSYPRGAPGA--L-T---RL-------EVRGLLASRDTRLLFVACTLM 211 (375)
T ss_pred ------cccHH-HHHHHHHHHHHHHHHHHHhCCCcccCcccc--c-C---cc-------hhhhhhcCcchHHHHHHHHHH
Confidence 35764 4555555444444433 3466543221111 0 0 00 111245566665433322211
Q ss_pred HHHHHHHHhhhccccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCC
Q 013318 268 GLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTS 346 (445)
Q Consensus 268 g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~ 346 (445)
..........++.++. +.+.+.++.+...........++.++.|++.||+++|+.+ ..+.++..+.+. .....++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-~~~~~~~~~~~~--~~~~~~~- 287 (375)
T TIGR00899 212 WGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM-LLAALAGVAFYT--GLAADNS- 287 (375)
T ss_pred HHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH-HHHHHHHHHHHH--HHHHHHH-
Confidence 1111111223333321 2345555677776666677788889999999999988743 444444333322 1122222
Q ss_pred CccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHH
Q 013318 347 GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGI 422 (445)
Q Consensus 347 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~ 422 (445)
.........+.|++.+...+..++...+..|++++.+.+.++....+|..+++.+.+. .++...+.+.+++.
T Consensus 288 ----~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~ 363 (375)
T TIGR00899 288 ----LWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVML 363 (375)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 1334455667788777777777888889998877778888888888888777666543 35666777777777
Q ss_pred HHHHHHHHH
Q 013318 423 CVALVGILF 431 (445)
Q Consensus 423 ~~~~~~~~~ 431 (445)
+++.+...+
T Consensus 364 ~~~~~~~~~ 372 (375)
T TIGR00899 364 IVALFCLLL 372 (375)
T ss_pred HHHHHHHhe
Confidence 777666543
No 58
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=6.8e-21 Score=196.00 Aligned_cols=368 Identities=14% Similarity=0.081 Sum_probs=210.2
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHH
Q 013318 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (445)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~ 101 (445)
.++.+..+.++.++....+.....+.|.+.++.+++... .+..+....+++++.|++.||+|||+++..+..+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 97 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSV 97 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 344555666666665556655566667776666766543 3444556677889999999999999999999887766
Q ss_pred HHHH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 102 FVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 102 ~~~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
.... ...+++..+++.|++.|++.+..++....++.++. ++++|++++|+......+|..+|+.+...+
T Consensus 98 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 98 GTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESW----------PKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554 36788999999999999999999998889999887 467899999999999999999999888766
Q ss_pred hcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhH-----HHHHHH---H-----
Q 013318 181 LKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSY-----LVSLSK---S----- 247 (445)
Q Consensus 181 ~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~----- 247 (445)
... .+||. .|.+..+..++..+....+|++++.++++.++.+..+..+ .++... .
T Consensus 168 ~~~-----------~~w~~-~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (496)
T PRK03893 168 VPV-----------WGWRA-LFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAA 235 (496)
T ss_pred hcc-----------CCHHH-HHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHH
Confidence 532 35764 3332111111111111223432211111000000000000 000000 0
Q ss_pred -HHHhhc----------------------------cch--hHHHHHHHHHHHHHHHH-HHhhhccccc-ccccccchhHH
Q 013318 248 -ITTLLA----------------------------DVR--MLLIIPLFAYSGLQQAF-VWAEFTKEIV-TPALGVSGVGG 294 (445)
Q Consensus 248 -~~~~l~----------------------------~~~--~~~l~~~~~~~g~~~~f-~~~~~~~~~~-~~~~~~~~~g~ 294 (445)
....+. .++ .........+..+...+ ....+|.++. +.+++..+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~ 315 (496)
T PRK03893 236 ALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVAN 315 (496)
T ss_pred HHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHH
Confidence 000000 000 00000000000000000 1123343332 34566667899
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhH
Q 013318 295 AMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 374 (445)
Q Consensus 295 ~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 374 (445)
+.+...++.++++++.|++.||+++|+.+ ..+.++..+..+. + ...++.. ........++.+.......+..++
T Consensus 316 ~~~~~~~~~~~g~~~~g~l~dr~g~~~~~-~~~~~~~~~~~~~-~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 389 (496)
T PRK03893 316 VLFFSGFGAAVGCCVGGFLGDWLGTRKAY-VCSLLISQLLIIP-V-FAIGGAN---VWVLGLLLFFQQMLGQGISGLLPK 389 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHH-HHHHHHHHHHHHH-H-hhccccH---HHHHHHHHHHHHHHhcccchhhHH
Confidence 99999999999999999999999988743 4444443333221 1 1121211 122222333333322233456677
Q ss_pred HHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHH
Q 013318 375 LLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVG 421 (445)
Q Consensus 375 ~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~ 421 (445)
++.+.+|++ +++++|+++....+|..+|+.+.+. .++...+....+.
T Consensus 390 ~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 390 LIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 888999876 4557888888888887777766543 3555555444433
No 59
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.90 E-value=3.4e-20 Score=190.19 Aligned_cols=378 Identities=13% Similarity=0.053 Sum_probs=217.3
Q ss_pred CcccccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHH--HHHHHHhhhhHHHHHHHh-----Ccchh-hh
Q 013318 22 TPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGIL--YTSFTCFSLVASLVVRVL-----GSKNA-LI 93 (445)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~--~~~~ai~~l~~g~l~dr~-----G~k~~-l~ 93 (445)
||.+.+|....+.+++ .............|....+.+.+....+.+ ...-.+.+++.++++||+ ||||. +.
T Consensus 7 ~~~~~~~~~~~~~l~~-~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll 85 (491)
T PRK11010 7 RIFQQPNSAILLILGF-ASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLL 85 (491)
T ss_pred HHHcccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHH
Confidence 4444444444443333 333333333444555555556655444443 112226889999999999 99986 55
Q ss_pred hhhHHHHHHHHH--hh--hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHh
Q 013318 94 LGTTGYWLFVAA--NL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASH 169 (445)
Q Consensus 94 ~g~~~~~~~~~~--~~--~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg 169 (445)
++.+...+.... +. .+++..+.+.+++.|++.+...+...++++|+. |++|||++.++......+|
T Consensus 86 ~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~----------~~~~rg~~~~i~~~g~~lG 155 (491)
T PRK11010 86 ATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVL----------PAEERGAGAAISVLGYRLA 155 (491)
T ss_pred HHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------ChhhhHHHHHHHHHHHHHH
Confidence 665555444332 22 246777888899999999999999999999997 4678999999999999999
Q ss_pred hhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHH
Q 013318 170 QFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSIT 249 (445)
Q Consensus 170 ~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (445)
.++|+.+...+..+. .|||. .|.+.+++.++..+..+++|||++.++++ + + .+.+.. ++..
T Consensus 156 ~llg~~l~~~l~~~~----------~GWr~-~f~i~a~l~ll~~l~~~~~~e~~~~~~~~--~-~--~~~~~~---~~l~ 216 (491)
T PRK11010 156 MLVSGGLALWLADRY----------LGWQG-MYWLMAALLIPCIIATLLAPEPTDTIPVP--K-T--LEQAVV---APLR 216 (491)
T ss_pred HHHHHHHHHHHHhcc----------cCHHH-HHHHHHHHHHHHHHHHHhcCCCccccccc--c-c--hhhhHH---HHHH
Confidence 999988877665321 36864 45555555555544445567654321111 0 0 001111 2233
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHHhhhccccc-ccccccchhHHHHH-HHHHHHHHHHhhhhccccCCCCccchHhHH
Q 013318 250 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMA-VYGAFDAICSLAAGRLTTGLPSITFIVSGG 327 (445)
Q Consensus 250 ~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~-~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g 327 (445)
+.+++++.+......+.......+...+.++++. ..+++.++.+.+.. ...++.++|.++.|++.||+++|+.++ .+
T Consensus 217 ~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~-i~ 295 (491)
T PRK11010 217 DFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALM-IF 295 (491)
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HH
Confidence 4556666554333222222222222233333332 24566677888764 455788999999999999999877443 33
Q ss_pred HHHHHHHH-HHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHh
Q 013318 328 AIAQVVVF-LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFI 405 (445)
Q Consensus 328 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i 405 (445)
.++..+.. .+..+...++ + ...+....++..++.+...+...++..++.+++. ++.+|..+....+|..++..+
T Consensus 296 ~~l~~l~~l~~~~l~~~~~-~---~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~ 371 (491)
T PRK11010 296 GILQGVSNAGYWLLSITDK-N---LYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV 371 (491)
T ss_pred HHHHHHHHHHHHHHHhccc-c---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33323221 1111122211 1 1222333334333333333445677778887764 457888888887776543323
Q ss_pred hc----chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 406 GP----YISLQAMLIVMVVGICVALVGILFLTI 434 (445)
Q Consensus 406 ~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~ 434 (445)
.+ ..++...+.+..++.+++.+...+.++
T Consensus 372 ~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 372 AGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 32 235666677777777777776666543
No 60
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.90 E-value=2.7e-21 Score=199.27 Aligned_cols=352 Identities=13% Similarity=-0.011 Sum_probs=188.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcc------hhhHHhHHHHhhhhhHHhhhhhhhHHH
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWVGEGTYLT 137 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~------~~~li~~r~l~Gig~g~~~~~~~~~i~ 137 (445)
.+.......+++++.|++.||+|||+++.++.+++.+..... ..++ +..+++.|+++|++.|..++....|++
T Consensus 62 ~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 141 (502)
T TIGR00887 62 NGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITS 141 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 344555677889999999999999999999988777655543 3333 678889999999999999999999999
Q ss_pred HhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccc----------ccc--ccCCCCCcchhHHHHH
Q 013318 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKV----------CAA--LLGGSTSGTTLLFIVF 205 (445)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~----------~~~--~~~~~~~w~~~~~~i~ 205 (445)
|++ |+++||+++++.+....+|..+|+.++..+...... |.. .....++||. .+.+.
T Consensus 142 e~~----------p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~-~~~~~ 210 (502)
T TIGR00887 142 EFA----------TKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRI-LIGFG 210 (502)
T ss_pred Hhc----------ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHH-HHHHH
Confidence 998 578999999999999999999999887654321100 000 0001246874 33333
Q ss_pred HHHHHHHHHHHHhccCCcc----cCcccc-cc-----------c-chhh-------hhHHHHHHHHHHHhhccchhHHHH
Q 013318 206 LGVITLGTILMCFLRKEED----KGEKET-AD-----------A-SVNF-------YSYLVSLSKSITTLLADVRMLLII 261 (445)
Q Consensus 206 ~~l~~~~~~l~~~l~~~~~----~~~~~~-~~-----------~-~~~~-------~~~~~~~~~~~~~~l~~~~~~~l~ 261 (445)
.+..++..+..+++||+++ ++++++ .+ . +..+ ....+..+++.++..+.++.+...
T Consensus 211 ~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 290 (502)
T TIGR00887 211 AVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHL 290 (502)
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHH
Confidence 3333333333457888644 111110 00 0 0000 000001122222111112221111
Q ss_pred H--HHHHHHHHHHHH-H-hhhcccccccccccchh-----------HH-HHHHHHHHHHHHHhhhhccccCCCCccchHh
Q 013318 262 P--LFAYSGLQQAFV-W-AEFTKEIVTPALGVSGV-----------GG-AMAVYGAFDAICSLAAGRLTTGLPSITFIVS 325 (445)
Q Consensus 262 ~--~~~~~g~~~~f~-~-~~~~~~~~~~~~~~~~~-----------g~-~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~ 325 (445)
. ...+.+....++ . .+.|..+.+.+++.... .. ......++.+++.++.+++.||+|||+.+ .
T Consensus 291 ~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l-~ 369 (502)
T TIGR00887 291 LGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ-L 369 (502)
T ss_pred HHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH-H
Confidence 1 111111111111 1 11222222222222111 11 12344556667888899999999998744 4
Q ss_pred HHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHH
Q 013318 326 GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFF 404 (445)
Q Consensus 326 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~ 404 (445)
.+.++..++.........+... ........+...++.....+..+.+.+|++|++. +.+.|+.+....+|..++..
T Consensus 370 ~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~ 446 (502)
T TIGR00887 370 MGFFILTVLFFVLGFAYNHLST---HGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQF 446 (502)
T ss_pred HHHHHHHHHHHHHHHHHHhcch---hHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHH
Confidence 4554444332211111111110 0111111111112222334556677899999884 45788888888888777655
Q ss_pred hhcch--------------hHHHHHHHHHHHHHHHHHHHHH
Q 013318 405 IGPYI--------------SLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 405 i~~~~--------------~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
+.+++ ++...+.+++++++++++.+++
T Consensus 447 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~ 487 (502)
T TIGR00887 447 GFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLL 487 (502)
T ss_pred HhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheE
Confidence 44332 1234566677776666655543
No 61
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.89 E-value=1.9e-21 Score=192.91 Aligned_cols=308 Identities=14% Similarity=0.056 Sum_probs=185.1
Q ss_pred HHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchh--------hHHhHHHHhhhhhHHhhhhhhhHHHHhhhhh
Q 013318 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (445)
Q Consensus 73 ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~--------~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~ 143 (445)
.+++++.|++.||+|||+++.++.++..+..... ..+++. .+++.|+++|++.+..++...+++.++.
T Consensus 49 ~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~--- 125 (394)
T TIGR00883 49 PLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA--- 125 (394)
T ss_pred hhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC---
Confidence 4688999999999999999999998877665543 455543 4778999999999999999899999887
Q ss_pred hhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCc
Q 013318 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 223 (445)
Q Consensus 144 ~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~ 223 (445)
++++|+++.++......+|.++|+++...+....... ....++||. .+.+..++.++...+...++|++
T Consensus 126 -------~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~---~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~ 194 (394)
T TIGR00883 126 -------PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD---ALLEWGWRI-PFLVSAVLVLIGLYLRRNLEETP 194 (394)
T ss_pred -------CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---HhhccchHH-HHHHHHHHHHHHHHHHHhcCCCh
Confidence 4779999999999989999999988766543211100 001246763 34443333333333223344432
Q ss_pred ccCcccccccchhhhhHHHHHHHHHHHhhccch--hHHHHHHHHHHHHHHHHHHhhhccccc-ccccccchhHHHHHHHH
Q 013318 224 DKGEKETADASVNFYSYLVSLSKSITTLLADVR--MLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYG 300 (445)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~l~~~~~~~g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~~~~ 300 (445)
+.++++.++ + ... ++..+.+|+++ ++......+..+..........+.++. ..+.+.++.+.......
T Consensus 195 ~~~~~~~~~-~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 265 (394)
T TIGR00883 195 VFEKAQEKH-K-KKR-------GPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSL 265 (394)
T ss_pred hHHHHHhcc-c-ccc-------CCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHH
Confidence 211111000 0 000 11223344444 443333333322222222233343332 23455567788888899
Q ss_pred HHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhc
Q 013318 301 AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILF 380 (445)
Q Consensus 301 i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~ 380 (445)
++..+++++.|++.||++||+.++..+.+...+++.. .....++.+ .........+.|++.+...+..++.+.|.+
T Consensus 266 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 341 (394)
T TIGR00883 266 ILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPL-LMALLDSGS---FTLFFFLVLGLALIGGMYTGPMGSFLPELF 341 (394)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH-HHHHhcCCc---hHHHHHHHHHHHHHHHHHhhhHHHHHHHhC
Confidence 9999999999999999998875433333322222111 111221111 133445566778888778888899999999
Q ss_pred cCCc-hhhHHH-HHHHHHHHHHHHHHhhc
Q 013318 381 KHDT-EGAFAQ-LKVWQCASIAVVFFIGP 407 (445)
Q Consensus 381 ~~~~-~~a~~~-~~~~~~~g~~ig~~i~~ 407 (445)
|++. ++++++ ++....+|..+++.+.+
T Consensus 342 p~~~~~~~~~~~~~~~~~~g~~~~p~~~g 370 (394)
T TIGR00883 342 PTEVRYTGASLAYNLAGAIFGGFAPYIAA 370 (394)
T ss_pred CccceeeEeeehhHhHHHHHhhHHHHHHH
Confidence 9764 456665 45555566655555543
No 62
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=7.7e-21 Score=191.54 Aligned_cols=375 Identities=12% Similarity=0.064 Sum_probs=208.4
Q ss_pred cchhHHHHHHHHHHHHHHhhhHhhhhh-hccCCCCchHHHH----HHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHH
Q 013318 27 TRDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTISLG----ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (445)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~-i~~~~~~g~~~~~----~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~ 101 (445)
+++++.+.+.+++.+.++....++.+. +.++.+++....+ .......+++++.|++.||+|||++++++..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLV 88 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 457777777777777776554444443 3444677665444 44446677889999999999999999887665443
Q ss_pred HHHHhh----hcchh-hHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHH
Q 013318 102 FVAANL----FPSWY-TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (445)
Q Consensus 102 ~~~~~~----~~~~~-~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li 176 (445)
...... .+.+. .......+.|+..+..+.+....+.++.++ .++++|+.+|......++|..+|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~g~~~~~~~~g~~i~~~~ 160 (420)
T PRK09528 89 LFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER--------VSRRSGFEYGRARMWGSLGWALCAFI 160 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH--------HHhhccccchhhHHhhhHHHHHHHHH
Confidence 322111 11111 011122333333333333333333444332 13457788888888888999999988
Q ss_pred HHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccch
Q 013318 177 TLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVR 256 (445)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 256 (445)
+..+... +|+ ..|.+.+++.++..++.+++++++++++++.++++.+++ +...++..+.+|+|+
T Consensus 161 ~g~l~~~------------~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~ 224 (420)
T PRK09528 161 AGILFNI------------NPQ-INFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANAS---AVSLKDALALLKLPK 224 (420)
T ss_pred HHHHHhc------------Cch-HhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccc---cccHHHHHHHccCCC
Confidence 8766421 344 335444444444444444444332221111000000000 112234556788888
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccc----ccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHH
Q 013318 257 MLLIIPLFAYSGLQQAFVWAEFTKE----IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV 332 (445)
Q Consensus 257 ~~~l~~~~~~~g~~~~f~~~~~~~~----~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~ 332 (445)
++.+....+............++.+ +.+.+.+....|.+.+...++..++.++.|++.||+++|+.+ ..+.++..
T Consensus 225 ~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~-~~~~~l~~ 303 (420)
T PRK09528 225 FWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNAL-LLAGTIMA 303 (420)
T ss_pred eEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh-HHHHHHHH
Confidence 7654432222211111111122222 222234445678888888999999999999999999998754 45444444
Q ss_pred HHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHH-HHHHHHHHHHHHHHhhcc--
Q 013318 333 VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQCASIAVVFFIGPY-- 408 (445)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~-~~~~~~~g~~ig~~i~~~-- 408 (445)
+... +..+.++. ........+.|++.+...+....++.+.+|++.+ +.++. +++...+|..++..+.+.
T Consensus 304 ~~~~--l~~~~~~~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~ 376 (420)
T PRK09528 304 VRII--GSGFATGP-----LEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLY 376 (420)
T ss_pred HHHH--HHHhcccH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHH
Confidence 4432 23344332 3344556677777777766777888888887644 34543 666666777666555433
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 409 --ISLQAMLIVMVVGICVALVGILFLT 433 (445)
Q Consensus 409 --~~~~~~~~i~~~~~~~~~~~~~~~~ 433 (445)
.++...+.+++++.++..+..++..
T Consensus 377 ~~~G~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 377 DSIGFQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HhhCchHHHHHHHHHHHHHHHHHHHHh
Confidence 3566677776666666555555443
No 63
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.89 E-value=5.4e-21 Score=186.43 Aligned_cols=335 Identities=16% Similarity=0.161 Sum_probs=227.3
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-h
Q 013318 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L 107 (445)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~ 107 (445)
+.++.++...++.......+.+.++.+.+.... +.......+++++.|++.||+|||+.+.++..+..+..... .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence 344455555555555555666655555554433 33344556788999999999999999999998877666543 5
Q ss_pred hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCcccc
Q 013318 108 FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVC 187 (445)
Q Consensus 108 ~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~ 187 (445)
.+++..+++.|++.|++.+..++...+++.|+. ++++|++.+++.....++|..+|+.++..+....
T Consensus 84 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--- 150 (352)
T cd06174 84 ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWF----------PPKERGRALGLFSAGFGLGALLGPLLGGLLAESL--- 150 (352)
T ss_pred hccHHHHHHHHHHHHcccccccHhHHHHHHHhC----------CccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 688899999999999999999999999999997 4679999999999999999999999888775432
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHH
Q 013318 188 AALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS 267 (445)
Q Consensus 188 ~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 267 (445)
+|+. .+.+..++..+..+...+++ |+++......+..
T Consensus 151 --------~~~~-~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~ 187 (352)
T cd06174 151 --------GWRW-LFLILAILGLLLALLLLFLL----------------------------------RLLLLLALAFFLL 187 (352)
T ss_pred --------hHHH-HHHHHHHHHHHHHHHHHHHH----------------------------------HHHHHHHHHHHHH
Confidence 3543 34444444444444333332 1222222211111
Q ss_pred HHHHHHHHhhhccccccc-ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCC
Q 013318 268 GLQQAFVWAEFTKEIVTP-ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTS 346 (445)
Q Consensus 268 g~~~~f~~~~~~~~~~~~-~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~ 346 (445)
...........+....+. +.+..+.+......+++..+++++.|++.||.++|+..+..+..+..++.+. ....++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~- 264 (352)
T cd06174 188 SFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLL--LALAPS- 264 (352)
T ss_pred HhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH--HHHhcc-
Confidence 111111112233222222 4455678888999999999999999999999998761334555555554432 223322
Q ss_pred CccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHH
Q 013318 347 GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVG 421 (445)
Q Consensus 347 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~ 421 (445)
....++..++.|++.+...+...+++.+..|++ +++++|.++..+.+|..++..+.+. .++...+.+..++
T Consensus 265 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~ 340 (352)
T cd06174 265 ----LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAAL 340 (352)
T ss_pred ----HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHH
Confidence 245667788899999999999999999999865 4567899999998888877666543 4566777777777
Q ss_pred HHHHHHHHH
Q 013318 422 ICVALVGIL 430 (445)
Q Consensus 422 ~~~~~~~~~ 430 (445)
.+++.+...
T Consensus 341 ~~i~~i~~~ 349 (352)
T cd06174 341 ALLAALLLL 349 (352)
T ss_pred HHHHHHHhe
Confidence 777666543
No 64
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.1e-21 Score=197.95 Aligned_cols=239 Identities=15% Similarity=0.077 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhh
Q 013318 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (445)
Q Consensus 63 ~~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~ 141 (445)
...+++|..|++++++++.+.||++..+.+....++++++.+. +..+|++.++..|+++|+.++..||+...+++.|.
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy- 163 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWY- 163 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhc-
Confidence 3468899999999999999999999999999999888887754 46899999999999999999999999999999998
Q ss_pred hhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHH-HHHHHhcc
Q 013318 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLG-TILMCFLR 220 (445)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~-~~l~~~l~ 220 (445)
.++|||+.+|++++..++|.++|++++..+.+..+. .+..||| +.|++.+++++.. ++..+++|
T Consensus 164 ---------~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~-----~~~~gW~-~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 164 ---------GKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS-----GGLAGWR-WLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred ---------ChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC-----CCcCCce-eehhHHHHHHHHHHheEEEEec
Confidence 468999999999999999999999999887542221 1235785 5677777776644 34446677
Q ss_pred C-Cccc--Ccccc-------cccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-ccccc
Q 013318 221 K-EEDK--GEKET-------ADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGV 289 (445)
Q Consensus 221 ~-~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~ 289 (445)
+ |++. .++++ .+++.......+...+...+.+|+|+++...+..++..........+.|.++.+ .+++.
T Consensus 229 ~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~ 308 (495)
T KOG2533|consen 229 DNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSE 308 (495)
T ss_pred CChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcCh
Confidence 5 4321 11111 010000000000233456788999999998887777766544333444444433 22444
Q ss_pred chhHHHHHHHHHHHHHHHhhhhccccCC
Q 013318 290 SGVGGAMAVYGAFDAICSLAAGRLTTGL 317 (445)
Q Consensus 290 ~~~g~~~~~~~i~~~~g~~~~G~l~d~~ 317 (445)
.+...+.+.+.++.+++.++.|.++||+
T Consensus 309 ~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 309 LQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 4677788899999999999999999995
No 65
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.4e-22 Score=195.64 Aligned_cols=368 Identities=13% Similarity=0.049 Sum_probs=225.4
Q ss_pred CCCcCccccccc-ccccccCcccccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchH----HHHHHHHHHHHhhhh
Q 013318 4 VDSRDEEAPLVA-DSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLV 78 (445)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~----~~~~~~~~~ai~~l~ 78 (445)
.++.++.+|+.+ +..+..+...+++..+++.+..++.+.+.++...+.+.+.+..+++.. ....+...+.++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl 87 (493)
T KOG1330|consen 8 RTTTSSGNPLIELEGLDHLSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPL 87 (493)
T ss_pred CCCccCCCcccccccccccccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHH
Confidence 344567777755 444556888899999999999999999988776665555444444432 234556678899999
Q ss_pred HHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhh
Q 013318 79 ASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGS 157 (445)
Q Consensus 79 ~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~ 157 (445)
+|++.||++||+++.+|..+|++.+++. +...++++.+.|.+.|+|++...+...++++|.+ ++++|++
T Consensus 88 ~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f----------~~~~Rs~ 157 (493)
T KOG1330|consen 88 FGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSF----------PDDKRSR 157 (493)
T ss_pred HHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcC----------cchhhhH
Confidence 9999999999999999999999988875 6688999999999999999999999999999998 5789999
Q ss_pred hhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHH-HHhccCCcccCcccccccchh
Q 013318 158 FNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVN 236 (445)
Q Consensus 158 ~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l-~~~l~~~~~~~~~~~~~~~~~ 236 (445)
.+++++.....|..+|.+++..+..... .|| +-|.+.++++++..++ .++++||++..+++.+...+.
T Consensus 158 ~~~ify~~ipvGsglG~vvgs~va~~~~----------~Wr-~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~ 226 (493)
T KOG1330|consen 158 VLGIFYFAIPVGSGLGYVVGSVVASLTF----------WWR-WAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM 226 (493)
T ss_pred HHHHhhhhcccccceeEEeeeeeccCcc----------ceE-EEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC
Confidence 9999998888888888777766654432 254 4566677777655444 467888876433322211100
Q ss_pred hhhHHHHHHHHHHHhhccchhHHHHHHHHH-HHHHH--HHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhc
Q 013318 237 FYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQ--AFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGR 312 (445)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-~g~~~--~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~ 312 (445)
..+.....++.+.+.|+|.+....+.+.. ++... .+|.+.+.++..+ .+...+.......+...+..+|.+++|.
T Consensus 227 -~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggi 305 (493)
T KOG1330|consen 227 -VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGI 305 (493)
T ss_pred -CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHH
Confidence 11122234455556666665443332222 22221 2232222222111 1112122233455777888899999999
Q ss_pred cccCCCC---c-cchH---hHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhh-hhhhhhHHHHhhccCCc
Q 013318 313 LTTGLPS---I-TFIV---SGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV-LNTQLSALLGILFKHDT 384 (445)
Q Consensus 313 l~d~~g~---~-~~~i---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~-~~~~~~~~l~~~~~~~~ 384 (445)
++||+.+ + .+.. +.+......+..+ +..++..... ........+++|....+ .+....-++.++.|.++
T Consensus 306 isd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~-L~~~~~~~~~--s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~ 382 (493)
T KOG1330|consen 306 ISDKLSRIFPNSGTLRASQLSAALGAPLSIPF-LFLFPAFTSS--SMIFGLILFLVGETISWFNWATNNPIFLEVVPPSR 382 (493)
T ss_pred HHHHHHHhcccccchhHHHHHHhhhhhHHHHH-HHHHHhhhhH--HHHHHHHHHHHHHHHHhcccccccceeeEecCccc
Confidence 9998432 1 1111 1111111111111 1122211110 12233445555554333 33444556777777776
Q ss_pred hh-hHHHHHHHHH
Q 013318 385 EG-AFAQLKVWQC 396 (445)
Q Consensus 385 ~~-a~~~~~~~~~ 396 (445)
++ ++++.+.+..
T Consensus 383 Rt~a~a~~~~~~h 395 (493)
T KOG1330|consen 383 RTTAYALDTVFEH 395 (493)
T ss_pred ccHHHHHHHHHHH
Confidence 64 7876665543
No 66
>TIGR00898 2A0119 cation transport protein.
Probab=99.89 E-value=3.4e-21 Score=198.74 Aligned_cols=349 Identities=15% Similarity=0.048 Sum_probs=215.2
Q ss_pred hhhhhccCCCCc---h----HHHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhhcchhhHHhHHHHh
Q 013318 50 LETTVNTEGNLG---T----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYL 121 (445)
Q Consensus 50 ~~~~i~~~~~~g---~----~~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~l~ 121 (445)
..+.+.+|.++. . ...+..+....+++++.|++.||+|||+++.++.++..+..+. .+.+++..+++.|++.
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 190 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV 190 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 345555566665 3 2355666677889999999999999999999998887776654 3678999999999999
Q ss_pred hhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhH
Q 013318 122 GFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLL 201 (445)
Q Consensus 122 Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~ 201 (445)
|++.+..++...+++.|+. ++++|+++.++.......|.+++++++..+. +||. .
T Consensus 191 G~~~~~~~~~~~~~~~e~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--------------~wr~-~ 245 (505)
T TIGR00898 191 GMGIGGIWVQAVVLNTEFL----------PKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP--------------DWRW-L 245 (505)
T ss_pred HhhccchHHHHHHHhheec----------ChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--------------HHHH-H
Confidence 9999999999999999987 4678999999998888888888887775432 2653 4
Q ss_pred HHHHHHHHHHHHHHHHhccCCccc----Cccccccc-------------chh-hhhHHHH---H---HHHHHHhhccchh
Q 013318 202 FIVFLGVITLGTILMCFLRKEEDK----GEKETADA-------------SVN-FYSYLVS---L---SKSITTLLADVRM 257 (445)
Q Consensus 202 ~~i~~~l~~~~~~l~~~l~~~~~~----~~~~~~~~-------------~~~-~~~~~~~---~---~~~~~~~l~~~~~ 257 (445)
+.+.++..++..+..+++||+++. .+.++.++ +.. ......+ . .....+++|+|++
T Consensus 246 ~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 325 (505)
T TIGR00898 246 QLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNL 325 (505)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHH
Confidence 555555555555555677775321 11000000 000 0000000 0 0133456777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHH
Q 013318 258 LLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW 337 (445)
Q Consensus 258 ~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~ 337 (445)
+......++..+...+. .+...+....++.+ ........++..+++.++.+++.||+|||+.+ ..+.++..++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~-~~~~~~~~~~~l~ 401 (505)
T TIGR00898 326 RKTTLCLMMLWFTTAFS--YYGLVLDLGNLGGN-IYLDLFISGLVELPAKLITLLLIDRLGRRYTM-AASLLLAGVALLL 401 (505)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHhccccccCCC-hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHHH
Confidence 65443332222221111 11101111122222 22334466788888999999999999998744 4555554444332
Q ss_pred HHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcch--hHHHH
Q 013318 338 ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI--SLQAM 414 (445)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~~--~~~~~ 414 (445)
+.+.++.. ........++.+++.+...+..+++.+|.+|++. +.+.|+.+....+|..+++.+.+.. +....
T Consensus 402 --~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~ 476 (505)
T TIGR00898 402 --LLFVPVDL---YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLP 476 (505)
T ss_pred --HHHcCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhH
Confidence 22333221 1233344445556666666778899999999874 4578888888888888887666521 23445
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013318 415 LIVMVVGICVALVGILFL 432 (445)
Q Consensus 415 ~~i~~~~~~~~~~~~~~~ 432 (445)
+.+++++.+++.+..+++
T Consensus 477 ~~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 477 LVLFGGLALLAGILTLFL 494 (505)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 566666666665554443
No 67
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.89 E-value=4.1e-20 Score=185.97 Aligned_cols=383 Identities=10% Similarity=-0.003 Sum_probs=222.6
Q ss_pred hHHHHHHHHHHHHHHhhhHh-hhhhhccCCCCchHHHHHH----HHHHHHhhhhHHHHHHHhCc-chhhhhhhHHHHHHH
Q 013318 30 VHILSCAFLLIFLAYGAAQN-LETTVNTEGNLGTISLGIL----YTSFTCFSLVASLVVRVLGS-KNALILGTTGYWLFV 103 (445)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~-~~~~i~~~~~~g~~~~~~~----~~~~ai~~l~~g~l~dr~G~-k~~l~~g~~~~~~~~ 103 (445)
...+++-+++.|..+..... +.+.+.++.+++....+.+ .....+++++.|.+.||+|+ |+++.++.++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 4 TAKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 34566666777777665543 3444445566776554444 44556788899999999965 778887777665544
Q ss_pred HH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhc
Q 013318 104 AA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (445)
Q Consensus 104 ~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~ 182 (445)
.. .+.+++..+...|++.|++.+...+...+.......+... |...+..|.|.+|. +|.++|++++..+..
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~--~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~ 155 (418)
T TIGR00889 84 FFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGL--DVVTDFPPIRVMGT------IGFIAAMWAVSLLDI 155 (418)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCC--CchhcCCCeeeehh------HHHHHHHHHHHHhcc
Confidence 43 3567788888899999998776666555443333221110 11122346676663 577777777765521
Q ss_pred CccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHH
Q 013318 183 DDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP 262 (445)
Q Consensus 183 ~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 262 (445)
. ..|+ .+.+.+++.++..++.+++||+++.++++ +.+ ..+..+ .+..+.+|+|+++.+..
T Consensus 156 ~-----------~~~~--~f~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~--~~~~~~---~~~~~~~k~~~~~~~~~ 215 (418)
T TIGR00889 156 E-----------LSNI--QLYITAGSSALLGVFALTLPDIPVAKSTA--KMS--IKVMLG---LDAFILFKNKRMAIFFF 215 (418)
T ss_pred c-----------chhH--HHHHHHHHHHHHHHHHhcCCCCCCCcccc--ccC--HHHHhh---hhHHHHhcCCCeeeHHH
Confidence 1 1132 23344444444444445666643211111 000 000000 12235688998866555
Q ss_pred HHHHHHHHHHHHHhhhcccccccc--------cccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHH
Q 013318 263 LFAYSGLQQAFVWAEFTKEIVTPA--------LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV 334 (445)
Q Consensus 263 ~~~~~g~~~~f~~~~~~~~~~~~~--------~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~ 334 (445)
..+..+.........++.+..+.+ ++.+..+...+...+..+++.++.|++.||+|+|+. +..+.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~-l~~~~~~~~v~ 294 (418)
T TIGR00889 216 FSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKV-MLLSLVAWALR 294 (418)
T ss_pred HHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-HHHHHHHHHHH
Confidence 444433322222222232222222 234567888899999999999999999999999874 45666665554
Q ss_pred HHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHH-HHHHHHHHHHHHhhcch---
Q 013318 335 FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLK-VWQCASIAVVFFIGPYI--- 409 (445)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~-~~~~~g~~ig~~i~~~~--- 409 (445)
+.+ ....+... ......++..++.|++.+...+....++.+.+|++ +++++|+++ ..+++|..+|+.+.+.+
T Consensus 295 ~~l--~~~~~~~~-~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~ 371 (418)
T TIGR00889 295 FGF--FAYGDPEY-FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEK 371 (418)
T ss_pred HHH--HHHcCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 332 22221111 00123455677888888888888888999999876 556889886 56677877776666432
Q ss_pred -------hHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCC
Q 013318 410 -------SLQAMLIVMVVGICVALVGILFL-TIQVEKAFYSPR 444 (445)
Q Consensus 410 -------~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 444 (445)
++...+++.+++.+++++...+. ..++++.|+|.|
T Consensus 372 ~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 414 (418)
T TIGR00889 372 MFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAIKVDDR 414 (418)
T ss_pred hccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCCCCccc
Confidence 35566666666655555554444 334445566665
No 68
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.89 E-value=4.8e-20 Score=183.44 Aligned_cols=337 Identities=11% Similarity=0.004 Sum_probs=214.7
Q ss_pred hhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHH----HHHHHHhhhhHHHHHHHhCcchh----hhhhhHHHH
Q 013318 29 DVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGIL----YTSFTCFSLVASLVVRVLGSKNA----LILGTTGYW 100 (445)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~----~~~~ai~~l~~g~l~dr~G~k~~----l~~g~~~~~ 100 (445)
....+.+.+++.+.++....++.|.+.+|.+.+....+.. .....+++++.+++.||+|||+. +..+..++.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 5 PFRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFA 84 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 3455778888888887777777777777777777655554 33455678889999999997443 333332222
Q ss_pred HHHHHhhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 101 LFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 101 ~~~~~~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
+. .....++++.+++.|+++|.+.+...+...++..++ +++|++++|......++|.++|++++..+
T Consensus 85 ~~-~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~------------~~~~~~~~g~~~~~~slG~~~g~~l~g~l 151 (382)
T TIGR00902 85 AA-FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW------------QKQFGLDYGKVRLIGSAAFIIGSALFGGL 151 (382)
T ss_pred HH-HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH------------HHHcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 21 112457888888899999999888777766665433 35789999999999999999999988877
Q ss_pred hcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHH
Q 013318 181 LKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI 260 (445)
Q Consensus 181 ~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 260 (445)
..+ .|||.. |.+...+..+ .++.+.++++.++++++ ++++ .++ .++..+.+|+|+++..
T Consensus 152 ~~~-----------~g~~~~-f~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~---~~~----~~~~~~~l~~~~~~~~ 210 (382)
T TIGR00902 152 IGM-----------FDEQNI-LAILTAGLAF-MLIGFLIKPTIPPKDAI-PEDE---SQG----DSAFIALLKNPMNLRF 210 (382)
T ss_pred HHH-----------cChhHH-HHHHHHHHHH-HHHHHHcCCCCCCCccc-cccc---ccc----chhHHHHHcChHHHHH
Confidence 643 357653 3333322211 22223333321111111 0000 000 1224467889998766
Q ss_pred HHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHh
Q 013318 261 IPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI 340 (445)
Q Consensus 261 ~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~ 340 (445)
....+..........+.++.++.+.+.+.+.+|.......++++++.++.+++.||++.|+ ++..+.++..+.+. +.
T Consensus 211 l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~-~l~~~~~~~~~~~~--~~ 287 (382)
T TIGR00902 211 LAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD-LLLISAIACVGRWA--II 287 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH-HHHHHHHHHHHHHH--HH
Confidence 5544433332222334555555445566667898888899999999999999999999887 45677777666643 23
Q ss_pred hccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHH-HHHHHHHHHHHhhcc
Q 013318 341 NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKV-WQCASIAVVFFIGPY 408 (445)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~-~~~~g~~ig~~i~~~ 408 (445)
.+.++ ...++....+.|+..+...+....++.+. |++ ++...++++. ...+|..+|..+++.
T Consensus 288 ~~~~~-----~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 288 GAIEA-----FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred HhHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34433 24566678889999999988888888887 654 4445677763 345666666655544
No 69
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.89 E-value=4.4e-20 Score=208.49 Aligned_cols=319 Identities=15% Similarity=0.123 Sum_probs=199.7
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH----hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhh
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~----~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~ 140 (445)
.+++...+.++++++|+++||+|||++++++.++..+..+. ...+++..+++.|+++|++.+..+++..++++++.
T Consensus 53 ~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 132 (1146)
T PRK08633 53 NALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELV 132 (1146)
T ss_pred HHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhc
Confidence 34455567788999999999999999999988765443332 23467889999999999999999999999999997
Q ss_pred hhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhcc
Q 013318 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLR 220 (445)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~ 220 (445)
++++|++++|+.....++|.++|++++..+........ ..+..+|+...+.+...+.++++++.+++|
T Consensus 133 ----------~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (1146)
T PRK08633 133 ----------GKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNT--PSEILGRIAPAGLVLLAVAVLGLIFAYRLP 200 (1146)
T ss_pred ----------CcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcccc--ccccccchHHHHHHHHHHHHHHHHHHhcCc
Confidence 46899999999999999999999999887754310000 000012222222222222222333334555
Q ss_pred CCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccc-hhHHHHHH
Q 013318 221 KEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVS-GVGGAMAV 298 (445)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~-~~g~~~~~ 298 (445)
+.++...+...+.. ....++..+....++++|.++......+............++.++.. .+++.. ..|++.+.
T Consensus 201 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~ 277 (1146)
T PRK08633 201 KVPAAAPEVFDKKK---YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAA 277 (1146)
T ss_pred CCCCCCcccccccc---cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHH
Confidence 53321111100000 00111112233445677776654433332222222222334433321 344555 67888899
Q ss_pred HHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHh
Q 013318 299 YGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI 378 (445)
Q Consensus 299 ~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~ 378 (445)
.+++.++++++.|++.||.++++.+ .++.++..++++ .+.+.++ ....++..+++|++.+...+..++++.+
T Consensus 278 ~~ig~~~g~~~~g~l~~r~~~~~~~-~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 349 (1146)
T PRK08633 278 SAIGIGIGSLLAGRLSGRHIELGLV-PLGALGLALSLF--LLPTAPS-----LASVLVLFFLFGFSAGLFIVPLNALIQF 349 (1146)
T ss_pred HHHHHHHHHHHHHHHhCCceEccch-hHHHHHHHHHHH--HHHHhhh-----HHHHHHHHHHHHHHHHHhhHHHHHHHhh
Confidence 9999999999999999999877643 455554444432 2223322 2345567788899888888888899999
Q ss_pred hccCC-chhhHHHHHHHHHHHHHHHHHhh
Q 013318 379 LFKHD-TEGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 379 ~~~~~-~~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
..|++ +++++|++++.+.+|..++..+.
T Consensus 350 ~~p~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 350 RAPEKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred cCCccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 98876 55688988888888875554443
No 70
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.89 E-value=4.6e-20 Score=208.09 Aligned_cols=311 Identities=15% Similarity=0.058 Sum_probs=199.8
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhh---HHHHHHHH-HhhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhh
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGT---TGYWLFVA-ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~---~~~~~~~~-~~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~ 140 (445)
.+.....++++++++|+++||+|||+++.... +.+..... +...++++.+++.|+++|++.+..+++..+++.++.
T Consensus 58 ~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~ 137 (1140)
T PRK06814 58 GAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHL 137 (1140)
T ss_pred HHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhc
Confidence 44455667889999999999999999864322 22222222 234588999999999999999999999999999997
Q ss_pred hhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhcc
Q 013318 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLR 220 (445)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~ 220 (445)
++++|++++|+..+..++|.++|+++++.+.... +|+. .|+...++.+++.++.++++
T Consensus 138 ----------~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-----------~~~~-~~~~~~~~~~~~~~~~~~~~ 195 (1140)
T PRK06814 138 ----------NKDELLGANALVEAGTFIAILLGTIIGGLATISG-----------NFVI-LVALLMGIAVLGWLASLFIP 195 (1140)
T ss_pred ----------CccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-----------ccHH-HHHHHHHHHHHHHHHHhhCC
Confidence 5789999999999999999999999998876432 4653 33222222333333445566
Q ss_pred CCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHH
Q 013318 221 KEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVY 299 (445)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~ 299 (445)
++++.+.+. .. + ....++.........++|.++.....++...+..+....++|.++.+ .+.+....|++++.+
T Consensus 196 ~~~~~~~~~-~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~ 270 (1140)
T PRK06814 196 KTGNAAPDL-KI-D---RNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVF 270 (1140)
T ss_pred CCCCCCCCC-ee-c---cchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHH
Confidence 543211111 00 0 00111112233445677877766655444443333333445544422 244556788999999
Q ss_pred HHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhc----------------cCCCCccchhHHHHHHHHHhh
Q 013318 300 GAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINY----------------SVTSGVLGTLYPLIMAALLGI 363 (445)
Q Consensus 300 ~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~G~ 363 (445)
+++.++|+++.|+++|+..+++.+ ..+.++..++.+.+.... ....+ ...+++..+++|+
T Consensus 271 ~~g~~ig~~~~g~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~ 346 (1140)
T PRK06814 271 SVGVAVGSFLASKLSEGRITLLYV-PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH---GWRILIDLFGLAA 346 (1140)
T ss_pred HHHHHHHHHHHHHHhCCceeeeee-hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccc---cHHHHHHHHHHHH
Confidence 999999999999999887665533 333333322221111110 00011 1344566778899
Q ss_pred hhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhh
Q 013318 364 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
+.+...+..++++.+..|++ +++++|.+++...+|..++..+.
T Consensus 347 ~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 347 AGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIIL 390 (1140)
T ss_pred HHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHH
Confidence 99988888999999999876 56689998888888777665444
No 71
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.88 E-value=1.3e-20 Score=185.42 Aligned_cols=319 Identities=11% Similarity=0.064 Sum_probs=198.6
Q ss_pred hHhhhhhhccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhhhcchhhHHhHHHHhh
Q 013318 47 AQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLG 122 (445)
Q Consensus 47 ~~~~~~~i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~~~~~~~li~~r~l~G 122 (445)
...+.|.+.++.+.+.... +..+..+.+++++.|++.||+|+|+++.++.++.++..+....++...+++.|++.|
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIRSAPGTALLFAGTALIG 98 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3456677777777776543 444556678889999999999999999999877665554445678888889999999
Q ss_pred hhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHH
Q 013318 123 FAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLF 202 (445)
Q Consensus 123 ig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~ 202 (445)
+|.+...+....++.++. +++|++++|++.....+|..+|+++...+..... .+||. .|
T Consensus 99 ~g~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~---------~~w~~-~f 157 (355)
T TIGR00896 99 VGIAIINVLLPSLIKRDF-----------PQRVGLMTGLYSMALMGGAALAAAATVPLAQHSG---------GHWQQ-AL 157 (355)
T ss_pred HHHHHHhccchHHHHHhC-----------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------hhHHH-HH
Confidence 999988877777776664 4689999999999999999999988766643321 13653 33
Q ss_pred HHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 013318 203 IVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI 282 (445)
Q Consensus 203 ~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~ 282 (445)
....++.++. +..++++.+++++++.+. .. +..++.+|+|+++.....+............+.|.++
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~ 224 (355)
T TIGR00896 158 AWWALPALLA--LLAWIPQVRRRVAANQTT----TR-------LTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAIL 224 (355)
T ss_pred HHHHHHHHHH--HHHHhhhhccccCCCCCC----CC-------CCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333322222 123344322111111000 00 0122456777776544333322221111223444444
Q ss_pred cccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHh
Q 013318 283 VTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 362 (445)
Q Consensus 283 ~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 362 (445)
.+.+.+.++.+...+.++++.++++++.|++.||+++|+..+..+..+..++.+. +.+.++. .. ....+++|
T Consensus 225 ~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~-~~~~~l~g 296 (355)
T TIGR00896 225 ISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCG--LLFAPMH-----GL-WAWALVLG 296 (355)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH--HHHhhhh-----HH-HHHHHHHH
Confidence 4445666678888999999999999999999999955444444555554444321 2233221 11 12456789
Q ss_pred hhhhhhhhhhhHHHHhhccCC-c-hhhHHHHHHHHHHHHHHHHHhhc
Q 013318 363 IGDGVLNTQLSALLGILFKHD-T-EGAFAQLKVWQCASIAVVFFIGP 407 (445)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~~~~-~-~~a~~~~~~~~~~g~~ig~~i~~ 407 (445)
++.+...+...+.+.+..+++ + +.++++.+....++..+++.+.+
T Consensus 297 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G 343 (355)
T TIGR00896 297 LGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVG 343 (355)
T ss_pred HhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888887777776666543 3 33567777666666666654443
No 72
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.88 E-value=2.2e-20 Score=179.13 Aligned_cols=379 Identities=13% Similarity=0.057 Sum_probs=241.0
Q ss_pred cCcccccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHH----HHHHhhhhHHHHHHHhCcchhhhhhh
Q 013318 21 LTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYT----SFTCFSLVASLVVRVLGSKNALILGT 96 (445)
Q Consensus 21 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr~G~k~~l~~g~ 96 (445)
.+++...||.+.-.+++.+.|......+.+.+.+.++.+++..+.+.+.. .-++.-++.|.+.||+|.|++..++.
T Consensus 7 ~~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~ 86 (417)
T COG2223 7 RGKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSM 86 (417)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHH
Confidence 45567788888888888888888888888888888888888876555444 33455678999999999999999998
Q ss_pred HHHHHHHHH-h---hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhh
Q 013318 97 TGYWLFVAA-N---LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFV 172 (445)
Q Consensus 97 ~~~~~~~~~-~---~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~i 172 (445)
++..+-... . ..+++++++..+++.|++.+..-+ ...+++++. ||+++|.++|++. .-++|..+
T Consensus 87 ~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav-~m~~~s~~f----------P~~~qG~AlGI~g-~GN~G~av 154 (417)
T COG2223 87 LLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAV-GMPNASFFF----------PKEKQGLALGIAG-AGNLGVAV 154 (417)
T ss_pred HHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehc-ccccccccC----------ChhhhhHHHHHhc-cccccHHH
Confidence 876553332 1 245667899999999998765444 456777776 6789999999987 67777777
Q ss_pred hhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCccc-CcccccccchhhhhHHHHHHHHHHH
Q 013318 173 GNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDK-GEKETADASVNFYSYLVSLSKSITT 250 (445)
Q Consensus 173 G~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (445)
-.+++..+..... .-.|+ ....++.+..++..++. +..+|.++. ++.+ + ..+ .+.+.
T Consensus 155 ~q~~~P~v~~~~g--------~~~w~-~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~--~-----~~~-----~~~~~ 213 (417)
T COG2223 155 AQLVAPLVAVAFG--------FLAWR-NVAGIYVVALAIAAVLAWLGMNDVPEHRASVK--P-----QLP-----AQLKA 213 (417)
T ss_pred HHHHHHHHHHHHh--------hHHHH-HHHHHHHHHHHHHHHHHHHHhCCChhhhcccc--c-----cch-----hHHHH
Confidence 6666665543321 00144 34445555555555544 445543221 1111 0 000 22334
Q ss_pred hhccchhHHHHHHHHH-HHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHH
Q 013318 251 LLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA 328 (445)
Q Consensus 251 ~l~~~~~~~l~~~~~~-~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~ 328 (445)
..++|+.|.+...++. .|-+.++ ..+++.++.+ -+++....|.....+.+...+.++.+|+++||+|.++.. ....
T Consensus 214 v~~~~~~W~lsllY~~tFG~Fvgf-s~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~-~~~f 291 (417)
T COG2223 214 VFSNKDTWLLSLLYFATFGGFVGF-SAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVT-LAVF 291 (417)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHH-HHHH
Confidence 5678888877654332 2222222 2455554432 344555677888889999999999999999999987643 3444
Q ss_pred HHHHHHHHHHHhhccCCCCc--cchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHH-----HH
Q 013318 329 IAQVVVFLWILINYSVTSGV--LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASI-----AV 401 (445)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~-----~i 401 (445)
...+++.. .+.+.++... .............+++.+..+...+.++..++|++.+.+.|+......+|. .+
T Consensus 292 ~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~ 369 (417)
T COG2223 292 VGMALAAA--LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAF 369 (417)
T ss_pred HHHHHHHH--HHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHH
Confidence 44333322 1223321110 001223333444555555666666788889998887776677666666663 33
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 402 VFFIGPYISLQAMLIVMVVGICVALVGILFLTIQV 436 (445)
Q Consensus 402 g~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 436 (445)
+...+..-++...++++..+.+++.+.......|.
T Consensus 370 g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 370 GVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44455555788889998888888887666554443
No 73
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.88 E-value=7.4e-20 Score=182.07 Aligned_cols=335 Identities=13% Similarity=0.010 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHH----HHHHhhhhHHHHHHHhCcc----hhhhhhhHHHHHHHH
Q 013318 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYT----SFTCFSLVASLVVRVLGSK----NALILGTTGYWLFVA 104 (445)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr~G~k----~~l~~g~~~~~~~~~ 104 (445)
....+++++.++....++.|...+|.+.+....+.... ...+++++.|++.||+||| +.+.++.....+ ..
T Consensus 9 ~~~~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~ 87 (382)
T PRK11128 9 LALSYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV-AF 87 (382)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH-HH
Confidence 34446666666665566666666666777665555444 4456688899999999984 333333222111 11
Q ss_pred HhhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCc
Q 013318 105 ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (445)
Q Consensus 105 ~~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~ 184 (445)
....++++.+++.|.+.|++.+..++...+++.++. ++|++++|.......+|.++||+++..+..+
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~------------~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~- 154 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQ------------KQIGLDYGKVRLWGSIAFVIGSALTGKLVSW- 154 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHHH------------hhccCCcchHHHHHHHHHHHHHHHHHHHHHH-
Confidence 123578888888999999999888888776666552 4578888888888899999999999887643
Q ss_pred cccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHH
Q 013318 185 KVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF 264 (445)
Q Consensus 185 ~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 264 (445)
.+||. .|++.++..++..+..++.|+++++++++ + + . ++ ..++..+.+|+|+++......
T Consensus 155 ----------~g~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~--~-~~---~~~~~~~i~~~~~~~~~~~~~ 214 (382)
T PRK11128 155 ----------FGEQA-ILWILTAGVASMLLGQLLRPTIMPQGESR--Q-Q--E-SA---GWPAWKALLKEPTVWRFLLCV 214 (382)
T ss_pred ----------cChhH-HHHHHHHHHHHHHHHHHccCCCCCccccc--c-c--c-cc---ccchHHHHHcChhHHHHHHHH
Confidence 35764 34443333223322223334322111111 0 0 0 00 012344678899887665544
Q ss_pred HHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccC
Q 013318 265 AYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV 344 (445)
Q Consensus 265 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~ 344 (445)
+..+.......+.++.+..+.+.+.++.|.......++.++..++.|++.||.++|+. +..+.++..++++ ...+.+
T Consensus 215 ~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-l~~~~~~~~~~~~--~~~~~~ 291 (382)
T PRK11128 215 SLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL-LLLSAICGVVRWG--LMGSTT 291 (382)
T ss_pred HHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHH--HHHhhh
Confidence 4333222222233333333345565678888888888999999999999999998874 4566665555543 233343
Q ss_pred CCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHH-HHHHHHHHHHHHhhcch
Q 013318 345 TSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK-VWQCASIAVVFFIGPYI 409 (445)
Q Consensus 345 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~-~~~~~g~~ig~~i~~~~ 409 (445)
+ +...++..+++|++.+...+....++.+..++++++..+.++ ....+|..+|+.+.+.+
T Consensus 292 ~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l 352 (382)
T PRK11128 292 A-----LPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFL 352 (382)
T ss_pred h-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 244566788889988888887778887775556655677665 33445556666555443
No 74
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.88 E-value=1.4e-19 Score=181.60 Aligned_cols=345 Identities=12% Similarity=0.048 Sum_probs=211.1
Q ss_pred hhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHH
Q 013318 29 DVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (445)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~ 104 (445)
.++++.+.+++.-..+.....+.|.+.++.+++.... +..+..+.+++++.|++.||+|||+++.++..++.+..+
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3455555555555454444567777777777776543 444556678889999999999999999999988776555
Q ss_pred Hh----hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 105 AN----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 105 ~~----~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
.. ..+++..++..|++.|+|.|..+++.+.++.+.. ++++|++.+++.+.+.++|..+|++++..+
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG----------PESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC----------CHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 2367888999999999999999999999998886 467899999999999999999999988766
Q ss_pred hcCcccc-cc-cc-------------CCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHH
Q 013318 181 LKDDKVC-AA-LL-------------GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLS 245 (445)
Q Consensus 181 ~~~~~~~-~~-~~-------------~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (445)
....... +. .. ....+|| ..|.+.+++.++..++..+.+.|+.+++++ + + .+.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~--~-~----~~~~~-- 223 (410)
T TIGR00885 154 ILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQ-TPYMIIGAVVLAVALLIMLTKMPALNHSDA--K-Q----ISFSA-- 223 (410)
T ss_pred HhcCCccchhhhhhhcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCcccc--c-c----ccchh--
Confidence 4321000 00 00 0012465 345444444333332222333333211111 1 0 01111
Q ss_pred HHHHHhhccchhHHH-HHHHHHHHHHHHHHHhhhccccccccccc--chhHHHHHHHHHHHHHHHhhhhccccCCCCccc
Q 013318 246 KSITTLLADVRMLLI-IPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITF 322 (445)
Q Consensus 246 ~~~~~~l~~~~~~~l-~~~~~~~g~~~~f~~~~~~~~~~~~~~~~--~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~ 322 (445)
+..+.+|+|+++.. ...+++.|.+.+.+ ++++.+..+.+.+. ...+.....+..+..+|+++.+++.||+++|+.
T Consensus 224 -~~~~~~~~~~~~~~~l~~f~yvg~e~~~~-s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~ 301 (410)
T TIGR00885 224 -SLSRLARIRHYREGVIAQFFYVGVQIMCW-TFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV 301 (410)
T ss_pred -hHHHHHhChhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 12245678877653 34556677765443 44444432222222 223445556667788999999999999988874
Q ss_pred hHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHH
Q 013318 323 IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVV 402 (445)
Q Consensus 323 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig 402 (445)
+..+.++..++.++ ..+.++ .....+.++.|++.+...|+++++..+..+++..++.+..... .+|.++.
T Consensus 302 -l~i~~~~~~~~~ll--~~~~~~------~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~~ 371 (410)
T TIGR00885 302 -LMAYAIIGMALCLG--SIFAGG------HVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA-IIGGGIV 371 (410)
T ss_pred -HHHHHHHHHHHHHH--HHHcCC------hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH-HhccchH
Confidence 44554444444322 223322 1234556667788877789999999999887755432222121 2555554
Q ss_pred HHh
Q 013318 403 FFI 405 (445)
Q Consensus 403 ~~i 405 (445)
+.+
T Consensus 372 p~l 374 (410)
T TIGR00885 372 PPL 374 (410)
T ss_pred HHH
Confidence 433
No 75
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.87 E-value=1e-18 Score=178.69 Aligned_cols=401 Identities=9% Similarity=0.031 Sum_probs=227.6
Q ss_pred CcccccchhHHHHHHHHHHHHHHhhhHh-hhhhhccCCCCchHHH----HHHHHHHHHhhhhHHHHHHH-hCcchhhhhh
Q 013318 22 TPKNYTRDVHILSCAFLLIFLAYGAAQN-LETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRV-LGSKNALILG 95 (445)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~i~~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr-~G~k~~l~~g 95 (445)
|.++.+|.++.+....++.-.+|+.... +...+.++.+++.... +.......+..+++|++.|| +||||++.+|
T Consensus 8 ~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 8 GLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred chhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHH
Confidence 4455667777777777777666665553 3344444455554433 22333444566789999999 9999999999
Q ss_pred hHHHHHHHHHh-hhcc-hhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhh
Q 013318 96 TTGYWLFVAAN-LFPS-WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (445)
Q Consensus 96 ~~~~~~~~~~~-~~~~-~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG 173 (445)
.+++.+....+ ..++ ...++.+|+++|+|.|...+...+++++..|+ ++++|++.++++....++|..+|
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~--------~~~~~~~~~~~~~~~~nig~~~g 159 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPP--------KDPRLDGAFTLFYMSINIGSLIS 159 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCC--------CchhhhcchhHHHHHHHHHHHHH
Confidence 99888766544 4444 33455789999999999999989999998852 12266888999999999999999
Q ss_pred hHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcc----cCccc-ccccch-------------
Q 013318 174 NLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED----KGEKE-TADASV------------- 235 (445)
Q Consensus 174 ~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~----~~~~~-~~~~~~------------- 235 (445)
+.++..+..+ .|||. .|.+..+...++++..++.++..+ +++++ .+....
T Consensus 160 ~~l~g~l~~~-----------~gw~~-~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~ 227 (489)
T PRK10207 160 LSLAPVIADK-----------FGYSV-TYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFV 227 (489)
T ss_pred HHHHHHHHHh-----------hChHH-HHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHH
Confidence 9999887643 35764 344433322333333333332111 11000 000000
Q ss_pred ----hhhhHHHH----------------HHHHHHHhhccchhHHHHHH----HHHHHHHHH-HHHhhhccc-cccccccc
Q 013318 236 ----NFYSYLVS----------------LSKSITTLLADVRMLLIIPL----FAYSGLQQA-FVWAEFTKE-IVTPALGV 289 (445)
Q Consensus 236 ----~~~~~~~~----------------~~~~~~~~l~~~~~~~l~~~----~~~~g~~~~-f~~~~~~~~-~~~~~~~~ 289 (445)
.+...... ..++..+..|+|.+...... .++..+.+. +..+.+.+. ......|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~ 307 (489)
T PRK10207 228 CAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGF 307 (489)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccce
Confidence 00000000 00000123344433322211 111112221 111222221 11011122
Q ss_pred c-hhHHHHHHHHHHHHHHHhhhhccccCCCCccc------hHhHHHHHHHHHHHHHH---hhccCCCCccchhHHHHHHH
Q 013318 290 S-GVGGAMAVYGAFDAICSLAAGRLTTGLPSITF------IVSGGAIAQVVVFLWIL---INYSVTSGVLGTLYPLIMAA 359 (445)
Q Consensus 290 ~-~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~------~i~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 359 (445)
. ....+.....+..++.+++.+++.||+++|+. .+..|.++..++++... ...................+
T Consensus 308 ~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~ 387 (489)
T PRK10207 308 SINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYL 387 (489)
T ss_pred EECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHH
Confidence 1 22334445667777888889999999987752 23567666555543110 11221111111234556788
Q ss_pred HHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcch--------------hHHHHHHHHHHHHHH
Q 013318 360 LLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI--------------SLQAMLIVMVVGICV 424 (445)
Q Consensus 360 l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~~--------------~~~~~~~i~~~~~~~ 424 (445)
+.|+|..+..+...+...+..|++. +.+.|++++.+.+|..+|..++... .+.+.+..+++..++
T Consensus 388 l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 467 (489)
T PRK10207 388 FQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLG 467 (489)
T ss_pred HHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHH
Confidence 8999999999999999999999875 4578899888888888776554211 244556666665555
Q ss_pred HHHHHHHHHHHHHhhhcC
Q 013318 425 ALVGILFLTIQVEKAFYS 442 (445)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~ 442 (445)
..+.++...++.+|....
T Consensus 468 ~~v~~~~~~~~~~~~~~~ 485 (489)
T PRK10207 468 VAVVMALMVPWLNRMINT 485 (489)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 555555555656555443
No 76
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=6.2e-19 Score=176.25 Aligned_cols=366 Identities=13% Similarity=0.093 Sum_probs=206.0
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhh-ccCCCCchHHHHH----HHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTV-NTEGNLGTISLGI----LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i-~~~~~~g~~~~~~----~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~ 102 (445)
++++.+....++.+.++....++.|.. .++.+.+....+. ......+++++.|++.||+|||+.++.+...+.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVL 81 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 567777777777777766665555543 3445666655443 44456678889999999999999998877655432
Q ss_pred HHHh----hhc-----chhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhh
Q 013318 103 VAAN----LFP-----SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (445)
Q Consensus 103 ~~~~----~~~-----~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG 173 (445)
.... ..+ .+..+++.|++.|++.+...+....+..+.. +++++.+|......++|.++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------------~~~~~~~g~~~~~~~~g~~~g 149 (396)
T TIGR00882 82 FAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS------------RNSNFEYGKARMFGCVGWALC 149 (396)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh------------hhcccccchhhhhcccHHHHH
Confidence 2211 111 2233455677888877766666555544432 234556677667778889999
Q ss_pred hHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhc
Q 013318 174 NLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLA 253 (445)
Q Consensus 174 ~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (445)
++++..+.. .+|+. .|.+.+++.++..++.++.++++++++++.++.+..++ ++..++..+.+|
T Consensus 150 ~~~~g~l~~------------~~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~ 213 (396)
T TIGR00882 150 ASIAGILFS------------IDPQI-VFWLGSGFALILMLLLMFAKPKAPSSATVANALGANAS---AFSLKLALELFR 213 (396)
T ss_pred HHHHhhhhc------------cCchH-HHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccC---CCCHHHHHHHHc
Confidence 988776532 24653 45444554544443334433222111111000000000 011234557788
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhccc----ccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHH
Q 013318 254 DVRMLLIIPLFAYSGLQQAFVWAEFTKE----IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAI 329 (445)
Q Consensus 254 ~~~~~~l~~~~~~~g~~~~f~~~~~~~~----~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~ 329 (445)
||+++...+..+...........+++.+ +.+.+.+....|.......+...++.+..|++.||+++|+. +..+.+
T Consensus 214 ~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~-l~~~~~ 292 (396)
T TIGR00882 214 QRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA-LLIAGT 292 (396)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHHHHH
Confidence 9987655443322221111111122222 11223444567888888888999999999999999998874 445555
Q ss_pred HHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHH-HHHHHHHHHHHHHHhhc
Q 013318 330 AQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQCASIAVVFFIGP 407 (445)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~-~~~~~~~g~~ig~~i~~ 407 (445)
+..+... ...+.++. ...++..++.|++..........+..+..|++.+ ++.+. ++....+|..++..+.+
T Consensus 293 l~~l~~~--~~~~~~~~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G 365 (396)
T TIGR00882 293 IMSVRII--GSSFATTA-----LEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAG 365 (396)
T ss_pred HHHHHHH--HHHhcCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHH
Confidence 5444432 22333332 3345556677777655554445556666665533 34554 66777777777654443
Q ss_pred c----hhHHHHHHHHHHHHHHHHHHH
Q 013318 408 Y----ISLQAMLIVMVVGICVALVGI 429 (445)
Q Consensus 408 ~----~~~~~~~~i~~~~~~~~~~~~ 429 (445)
+ .++...+.+.+++.+++...-
T Consensus 366 ~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 366 NMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 3 356677777666655555443
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.86 E-value=1.7e-18 Score=173.52 Aligned_cols=349 Identities=14% Similarity=0.102 Sum_probs=202.2
Q ss_pred hhhhhccCCCCchHHHHHHHHHH--HHhhhhHHHHHHHh-----Ccch-hhhhhhHHHHHHHHH-hhh---cchhhHHhH
Q 013318 50 LETTVNTEGNLGTISLGILYTSF--TCFSLVASLVVRVL-----GSKN-ALILGTTGYWLFVAA-NLF---PSWYTMVPA 117 (445)
Q Consensus 50 ~~~~i~~~~~~g~~~~~~~~~~~--ai~~l~~g~l~dr~-----G~k~-~l~~g~~~~~~~~~~-~~~---~~~~~li~~ 117 (445)
..|...+|.+.+....+.+.... .+.+++.|+++||+ |||| .+.++..+.++.... .+. ++++.++..
T Consensus 21 ~~~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~ 100 (402)
T PRK11902 21 TLQAWMTVEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGL 100 (402)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 34555667787777665554422 46788999999999 8876 577766665544433 232 356667777
Q ss_pred HHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCc
Q 013318 118 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSG 197 (445)
Q Consensus 118 r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w 197 (445)
.++.++..+...++..+++.++. +++||+++.++....+.+|..+|+.+...+.... .+|
T Consensus 101 ~~~~~~~~~~~~~~~~al~~~~~----------~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~----------~gw 160 (402)
T PRK11902 101 AVLVAFLSASQDIVFDAYSTDVL----------HPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV----------LGW 160 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----------ChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc----------cCH
Confidence 77888888889999999999997 4678999999999989999999988777665321 368
Q ss_pred chhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhh
Q 013318 198 TTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAE 277 (445)
Q Consensus 198 ~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~ 277 (445)
|. .|.+.+++.++..+..+++|||++.++++ + + ...+ ..++..+.+|+|+++......+.......+....
T Consensus 161 ~~-~f~i~a~~~l~~~l~~~~~~e~~~~~~~~--~-~--~~~~---~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~ 231 (402)
T PRK11902 161 GN-TYLLMAGLMLAGALTTLWAPEPEVPARPP--R-S--LGEA---VVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSL 231 (402)
T ss_pred HH-HHHHHHHHHHHHHHHHHhcCCCccccccc--c-h--hHHH---HHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHH
Confidence 64 45454554444433335566654322111 0 0 0011 1223445778888765544333322221111112
Q ss_pred hcccc-cccccccchhHHHHHHHH-HHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHH-HHHhhccCCCCccchhHH
Q 013318 278 FTKEI-VTPALGVSGVGGAMAVYG-AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSVTSGVLGTLYP 354 (445)
Q Consensus 278 ~~~~~-~~~~~~~~~~g~~~~~~~-i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 354 (445)
.+..+ .+.+++.++.|.+....+ ++.+++.++.|++.||+++|+.+ ..+.++..+..+ +..+...+++ ....
T Consensus 232 ~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l-~~~~~~~~l~~l~~~~~~~~~~~----~~~~ 306 (402)
T PRK11902 232 STTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL-MLFGVLQAVSNLGYWVLAVTPKH----LWTM 306 (402)
T ss_pred HHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHhcCCc----HHHH
Confidence 22222 224556667788776555 45789999999999999987744 344433332211 1112232222 1222
Q ss_pred HHHH----HHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHH----HHHHhhcchhHHHHHHHHHHHHHHHH
Q 013318 355 LIMA----ALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIA----VVFFIGPYISLQAMLIVMVVGICVAL 426 (445)
Q Consensus 355 ~~~~----~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~----ig~~i~~~~~~~~~~~i~~~~~~~~~ 426 (445)
+... +..|++.+...+....++.+.+|.+ .++.+....++|.. ++-.+.+..++...+.+.++++++++
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~ 383 (402)
T PRK11902 307 ALAIGIENLCGGMGTAAFVALLMALCNRSFSAT---QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGL 383 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 2222 3455656666666666666666543 33444444433433 33233345677777777777777776
Q ss_pred HHHHHHHHH
Q 013318 427 VGILFLTIQ 435 (445)
Q Consensus 427 ~~~~~~~~~ 435 (445)
+...+..+.
T Consensus 384 ~~~~~~~~~ 392 (402)
T PRK11902 384 ALLWLMRGT 392 (402)
T ss_pred HHHHHHhhh
Confidence 665444444
No 78
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.86 E-value=3.1e-18 Score=171.10 Aligned_cols=334 Identities=14% Similarity=0.080 Sum_probs=181.3
Q ss_pred hccCCCCchHHHHHHHH-----HHHHhhhhHHHHHHHhCcchhhhhh-hHHHHHHHHH-hhhcchhhHHhHHHHhhhhhH
Q 013318 54 VNTEGNLGTISLGILYT-----SFTCFSLVASLVVRVLGSKNALILG-TTGYWLFVAA-NLFPSWYTMVPASLYLGFAAS 126 (445)
Q Consensus 54 i~~~~~~g~~~~~~~~~-----~~ai~~l~~g~l~dr~G~k~~l~~g-~~~~~~~~~~-~~~~~~~~li~~r~l~Gig~g 126 (445)
+.++.+.+....+.... .+..+.++.++ .||+|+||.+++. .+...+.... .+.+++..+++.+.+.|...+
T Consensus 42 l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 120 (393)
T PRK15011 42 LTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGS 120 (393)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 44556766665555432 22334555556 9999999976544 4433343333 256677776555555554445
Q ss_pred HhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHH
Q 013318 127 IIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFL 206 (445)
Q Consensus 127 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~ 206 (445)
..++....++.++.++ ++++.+.+.++..+..++|.++|++++..+..+ .|||. .|.+.+
T Consensus 121 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~-----------~gw~~-~f~~~~ 180 (393)
T PRK15011 121 TANPQMFALAREHADK--------TGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG-----------FSFTV-MYLSAA 180 (393)
T ss_pred hhHHHHHHHHHHHhhh--------ccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-----------cChHH-HHHHHH
Confidence 6666666666665421 011224555777888899999999998877543 36864 455555
Q ss_pred HHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccch-hHHHHHH-HHHHHHHHHHHHhhhccccc
Q 013318 207 GVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVR-MLLIIPL-FAYSGLQQAFVWAEFTKEIV 283 (445)
Q Consensus 207 ~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~l~~~-~~~~g~~~~f~~~~~~~~~~ 283 (445)
++.++..++. +++||++++++++ +.+ .+ .. .++++ .+..... ....+.. ..+..+.|.++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~---~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~l~ 244 (393)
T PRK15011 181 VAFIVCGVMVWLFLPSMRKELPLA--TGT-------LE---AP---RRNRRDTLLLFVICTLMWGTN-SLYIINMPLFII 244 (393)
T ss_pred HHHHHHHHHHHhhcCccCCCCccc--ccc-------cc---cc---ccccccHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 4444443333 4466543221111 000 00 00 11222 2211111 1111111 111223343332
Q ss_pred -ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHh
Q 013318 284 -TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 362 (445)
Q Consensus 284 -~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 362 (445)
+.+++..+.+.+.....++.+++.++.|+++||+++|+. +..+.+...+.+. .....++ +...++..++.+
T Consensus 245 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~-~~~~~~~~~~~~~--~~~~~~~-----~~~~l~~~~l~~ 316 (393)
T PRK15011 245 NELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFL-MRVAAVAGVCFYA--GMLMAHS-----PAILLGLQLLNA 316 (393)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH-HHHHHHHHHHHHH--HHHHHhh-----HHHHHHHHHHHH
Confidence 124455567777777777778899999999999998874 3445444333322 1122222 122333333344
Q ss_pred hhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHHHHH
Q 013318 363 IGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
++.+...+..++...+..|++++.+.+.++....+|..++..+.+. .++...+.+..++++++.+.++++
T Consensus 317 ~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 317 IYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 4444444455567788899887778888877777777777655543 355666666666666666655544
No 79
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.85 E-value=5.8e-18 Score=166.83 Aligned_cols=321 Identities=14% Similarity=0.090 Sum_probs=205.9
Q ss_pred hhhHhhhhhhccCCCCchHH-----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHH
Q 013318 45 GAAQNLETTVNTEGNLGTIS-----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPAS 118 (445)
Q Consensus 45 ~~~~~~~~~i~~~~~~g~~~-----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r 118 (445)
.+.....|.+..|.+++... .+.++..+++++++.|++.||+|.|+++.++.+.+++..+.. +.+++..+.+.|
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555667776677766554 456666889999999999999999999999999998877765 677899999999
Q ss_pred HHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcc
Q 013318 119 LYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGT 198 (445)
Q Consensus 119 ~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~ 198 (445)
++.|+++|..+ +...++..|. |++||+++.|+..++..+|.++|++++..+. . .+||
T Consensus 123 ~llGvaEA~~~-A~~syI~~Wf----------P~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s-----------~gWr 179 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLV----------PPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T-----------LGWI 179 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-----------cCch
Confidence 99999999999 8899999998 5789999999999999999999998887733 2 2465
Q ss_pred h--hHHHHHHHHHHHHHHHHHhccCCccc----Ccc--------c--cc-ccch--hh---h----hHHHHHHHHHHHhh
Q 013318 199 T--LLFIVFLGVITLGTILMCFLRKEEDK----GEK--------E--TA-DASV--NF---Y----SYLVSLSKSITTLL 252 (445)
Q Consensus 199 ~--~~~~i~~~l~~~~~~l~~~l~~~~~~----~~~--------~--~~-~~~~--~~---~----~~~~~~~~~~~~~l 252 (445)
. .+..+-.....+++++.+++|.+++. +++ | .. +.+. .. + ...+....+..+..
T Consensus 180 ~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y 259 (511)
T TIGR00806 180 SYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIY 259 (511)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHh
Confidence 3 23333344445666677888865441 110 0 00 0000 00 0 01122334445566
Q ss_pred ccchhHH--HHHHHHHHHHHH--HHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCcc-chHhHH
Q 013318 253 ADVRMLL--IIPLFAYSGLQQ--AFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSIT-FIVSGG 327 (445)
Q Consensus 253 ~~~~~~~--l~~~~~~~g~~~--~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~-~~i~~g 327 (445)
+||+.+. +.-.+..+|+.+ .|....+- .+ ++.- .+.-|.+-++..+..++.++..|++-.+..+.. ..+.++
T Consensus 260 ~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~-~v-~~~~-~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~ 336 (511)
T TIGR00806 260 RNPQLLLWSLWWVFNSAGYYLITYYVHTLWG-TL-DESL-NKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVV 336 (511)
T ss_pred cCcchhhhhHHHHHHhhHHHHHHHHHHHHHH-Hc-CCCc-cccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHH
Confidence 7777632 333344455433 23222111 11 1111 114566667777777888889998855443211 122222
Q ss_pred HHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHH
Q 013318 328 AIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCAS 398 (445)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g 398 (445)
.++...++ .++.+.++ .++.++.+++++.......+...+-++....+++ +-.||+.++...+=
T Consensus 337 s~~~~gll--~~m~~t~~-----Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~L 401 (511)
T TIGR00806 337 SAIQAGLV--FWMSQSHD-----IWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATAL 401 (511)
T ss_pred HHHHHHHh--hhhhcccc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHH
Confidence 22333222 23455543 3678899999999888888887777777766554 34688887765433
No 80
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.3e-19 Score=182.30 Aligned_cols=340 Identities=11% Similarity=0.057 Sum_probs=219.1
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-h--hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhh
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~--~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~ 141 (445)
.+.++..+.++++++|++.||+|.|+++..+.++.++.++.. . ..+++.+++.|+++|+++|..+++.+.+.++|+
T Consensus 79 ~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~- 157 (466)
T KOG2532|consen 79 FSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWA- 157 (466)
T ss_pred HHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeEC-
Confidence 455555667888999999999999999999999888777654 2 234557788999999999999999999999998
Q ss_pred hhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-Hhcc
Q 013318 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLR 220 (445)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~ 220 (445)
|++||+++.++..++.++|.+++.++++.+.... .||+. .|.++++++++-.+++ ++..
T Consensus 158 ---------P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~----------~GW~s-ifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 158 ---------PPNERSTFIAILTAGSQLGTIITMPVSGLLCESS----------LGWPS-IFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC----------CCCch-HHHHHHHHHHHHHHHHHHHhc
Confidence 5889999999999999999999998888776441 47865 4556676665555444 3444
Q ss_pred C-CcccCc---ccccccchhhhhHHHH--HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhH
Q 013318 221 K-EEDKGE---KETADASVNFYSYLVS--LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVG 293 (445)
Q Consensus 221 ~-~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g 293 (445)
| |.+++. +|.+..+.++.....+ ..-..+++++++.++.+....+.-.........+.|.++++ -+++..+.|
T Consensus 218 d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G 297 (466)
T KOG2532|consen 218 DSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETG 297 (466)
T ss_pred CCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhh
Confidence 4 433221 1110000000000000 01134567889999888765555444433444556655542 467778999
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCCc--------cchHhHHHHHHHHHHHHHHhhccCCCCccchhHH--HHHHHHHhh
Q 013318 294 GAMAVYGAFDAICSLAAGRLTTGLPSI--------TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYP--LIMAALLGI 363 (445)
Q Consensus 294 ~~~~~~~i~~~~g~~~~G~l~d~~g~~--------~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~G~ 363 (445)
+..+++.+...+.+++.|.++||+.+| |..=.++....++++ +.+.+.++.+.. .++. .+...+.|+
T Consensus 298 ~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l--~~l~~~~~~~~~-~a~~~l~~~~~~~g~ 374 (466)
T KOG2532|consen 298 FLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFL--LVLAFTSDEHRL-LAVILLTIAIGLSGF 374 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHH--HeeeecCCCcch-HHHHHHHHHHHHccc
Confidence 999999999999999999999987552 111112222222232 234555432210 0111 112233333
Q ss_pred hhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcch-------hHHHHHHHHHHHHHHHHHHHHHH
Q 013318 364 GDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI-------SLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~~-------~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
..+... .-..+..|++.+..+|+.|+..+++..+++.+.+.+ .....|.+.+++.+++.+.|.+.
T Consensus 375 ~~~Gf~----~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 375 NISGFY----KNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred chhhhH----hhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 332222 122233666666678888998888888877665432 45667888888888888777655
No 81
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.85 E-value=1.4e-18 Score=171.16 Aligned_cols=323 Identities=11% Similarity=0.098 Sum_probs=193.0
Q ss_pred hhhhhhccCCCCchHHHHHHHH---HHHHhhhhHHHHHHHh-----Ccchhh-hhhhHHHHHHHHH-hhh---cchhhHH
Q 013318 49 NLETTVNTEGNLGTISLGILYT---SFTCFSLVASLVVRVL-----GSKNAL-ILGTTGYWLFVAA-NLF---PSWYTMV 115 (445)
Q Consensus 49 ~~~~~i~~~~~~g~~~~~~~~~---~~ai~~l~~g~l~dr~-----G~k~~l-~~g~~~~~~~~~~-~~~---~~~~~li 115 (445)
...|.+.+|.+++....+.... .++ .+++.|+++||+ ||||.+ +.+.+..++.+.. .+. .+...+.
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~ 87 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLA 87 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHH
Confidence 3455666677777766555432 223 388999999998 899975 5555555554333 233 3455566
Q ss_pred hHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCC
Q 013318 116 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGST 195 (445)
Q Consensus 116 ~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~ 195 (445)
..+++.|.+.+...++..++++|+. |+++|+++.|+...+..+|.++|+.++..+..+.+.+ ....+
T Consensus 88 ~~~~~~~~~~~~~~~~~~a~~~~~~----------~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~---~~~~~ 154 (356)
T TIGR00901 88 GLAFLIAFFSATQDIALDAWRLEIL----------SDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFAN---TGLIT 154 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC----------CHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccc---ccccc
Confidence 6777888888888888899999987 4689999999999999999999998887665443210 00123
Q ss_pred CcchhHHHHHHHHHHHHHHHHHh-ccCCcccCcccccccchhhhhHHHHHHHHHHHhhccch---hHHHHHHHHHHHHHH
Q 013318 196 SGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVR---MLLIIPLFAYSGLQQ 271 (445)
Q Consensus 196 ~w~~~~~~i~~~l~~~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~l~~~~~~~g~~~ 271 (445)
+||. .|.+.+++.++..+..++ .||+++.++++ + .+..+.++ ...+.+|+|+ .+.+....+......
T Consensus 155 ~wr~-~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~--~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (356)
T TIGR00901 155 LWGY-IFFWTALLILPGLLVTLFLAKEPQEDASVP--K---PLTQAVLK---PIREFFQRKNMIQALLLLLLIVLYKLGD 225 (356)
T ss_pred ccHH-HHHHHHHHHHHHHHHHHHhccCCCcccccc--h---hHHHHHHH---HHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 5864 455555544444433333 45543211111 0 01111222 2233455554 444333333223222
Q ss_pred HHHHhhhcccccccccccchhHHHHHHHH-HHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCC---
Q 013318 272 AFVWAEFTKEIVTPALGVSGVGGAMAVYG-AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSG--- 347 (445)
Q Consensus 272 ~f~~~~~~~~~~~~~~~~~~~g~~~~~~~-i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~--- 347 (445)
....+.++.++.+.+++.++.+.+....+ ++.+++.+++|++.||+|+|+.+ ..+.++..+.... +....++..
T Consensus 226 ~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l-~~~~~~~~~~~~~-~~~~~~~~~~~~ 303 (356)
T TIGR00901 226 SAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL-LLFGIVQALTNAG-FVWLASNGHHDG 303 (356)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHHHHHHHHHH-HHHHHhcCcccc
Confidence 22223444443334556667787777666 56789999999999999988754 4454444433221 111111100
Q ss_pred --ccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHH
Q 013318 348 --VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQC 396 (445)
Q Consensus 348 --~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~ 396 (445)
.........+.++.+++.+..++...+++.+.+|+++ ++.+|+++..++
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 304 ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 0002345556677899999999999999999998875 457888776553
No 82
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.84 E-value=5.4e-20 Score=174.17 Aligned_cols=336 Identities=17% Similarity=0.143 Sum_probs=211.8
Q ss_pred CCCchHHHHHHHHHHHHhhh----hHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhh
Q 013318 58 GNLGTISLGILYTSFTCFSL----VASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGE 132 (445)
Q Consensus 58 ~~~g~~~~~~~~~~~ai~~l----~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~ 132 (445)
.+..+...+.++++.|+.|+ +.|.++||+|+|-.+++|..+....++.+ +..+++.++++|.+||+|.+..+++.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 34445667888888877654 68999999999999999999887777776 67888999999999999999999999
Q ss_pred hhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHH
Q 013318 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLG 212 (445)
Q Consensus 133 ~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~ 212 (445)
.+.+++..+ +++|||+++|+...+.++|-.+||.+++.+.+..+ ....|++.++++++-
T Consensus 181 lamlAd~f~---------~d~er~~vmGialgfislG~lvgPpfGGilYe~~G------------k~aPFlVL~~v~Lld 239 (464)
T KOG3764|consen 181 LAMLADVFP---------EDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG------------KSAPFLVLAIVLLLD 239 (464)
T ss_pred HHHHHHHcc---------cchhhhHHHHHHHHHHhccceecCCcccchHhhcC------------CcCcHHHHHHHHHHH
Confidence 999999986 46789999999999999999999999998865432 234577777777666
Q ss_pred HHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccccccc-cc-
Q 013318 213 TILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VS- 290 (445)
Q Consensus 213 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~-~~- 290 (445)
..+-+++-||.+.++++ . ++ . +..++++++|..+.........+.+.+|.-+.++.... +.+. ..
T Consensus 240 ~~L~l~vi~p~~~~~~~-~--~~--~-------~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~-e~m~~p~w 306 (464)
T KOG3764|consen 240 GALQLLVIEPTEMDPDS-T--EQ--G-------TPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWML-ETMFTPGW 306 (464)
T ss_pred HHHHHheeCccccCccc-c--cc--C-------ccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHH-HhccCCCc
Confidence 65555655543322211 0 00 1 12456788999887766666677766666444443221 2222 23
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHH----HHHHHhhhhh
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLI----MAALLGIGDG 366 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~G~~~~ 366 (445)
++|......++...++..++|.+.||++..+.+...+..+ .++......-+.++ +.-+++ ..+.-+..|+
T Consensus 307 ~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~-~~G~~~~~iP~~~~-----~~~L~vp~~~l~~~i~~~da 380 (464)
T KOG3764|consen 307 EVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLA-TVGVSSGPIPFATS-----IAQLWVPNFGLGFGIGLADA 380 (464)
T ss_pred ceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHH-HHHHHhchhHhhhh-----HHHHhhhhHHHHHHHHHHHH
Confidence 5777778888999999999999999998433222222111 11211111111111 112222 2222334455
Q ss_pred hhhhhhhHHHHhhccC---CchhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 367 VLNTQLSALLGILFKH---DTEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGILFLT 433 (445)
Q Consensus 367 ~~~~~~~~~l~~~~~~---~~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~~~~~ 433 (445)
...|+..-++-....+ -.+..+++.....++|.++|+.+++. .+++|...+.+...++-.......+
T Consensus 381 sl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 381 SLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred HHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555444333222111 01223344444444555555544433 4678877777766665555444443
No 83
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.84 E-value=2.2e-17 Score=168.73 Aligned_cols=396 Identities=9% Similarity=-0.016 Sum_probs=225.2
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhHhhhhhh-ccC--CCCchHHHHH----HHHHHHHhhhhHHHHHHH-hCcchhhhhh
Q 013318 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTV-NTE--GNLGTISLGI----LYTSFTCFSLVASLVVRV-LGSKNALILG 95 (445)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i-~~~--~~~g~~~~~~----~~~~~ai~~l~~g~l~dr-~G~k~~l~~g 95 (445)
.+.++.++.+.+..++.-.+|+......+.. .++ .+++....+. ......+++++.|++.|| +|||+++.++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 3556667777677777766766665555544 333 4555544333 334556678899999999 8999999999
Q ss_pred hHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhh
Q 013318 96 TTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (445)
Q Consensus 96 ~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~ 174 (445)
..++++..+.. ..++...+++.|++.|+|.|...+...++++++.++. ++++|++++++++...++|..+|+
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~-------~~~~r~~~~~~~~~~~niG~~ig~ 158 (475)
T TIGR00924 86 GIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERG-------DMPRRDGGFTLFYMSINIGSFISP 158 (475)
T ss_pred HHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCC-------CcccccceehhHHHHHHHHHHHHH
Confidence 98887765543 5567777878999999999999999899999987521 114688999999999999999999
Q ss_pred HHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcc-cCccc--ccccchhhhhHH----------
Q 013318 175 LITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED-KGEKE--TADASVNFYSYL---------- 241 (445)
Q Consensus 175 li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~-~~~~~--~~~~~~~~~~~~---------- 241 (445)
+++..+..+ .+|+. .|.+.++..+++.+..++.+++.+ .++++ .++++.......
T Consensus 159 ~l~g~l~~~-----------~g~~~-~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (475)
T TIGR00924 159 LLAGVIAEN-----------YGYHV-GFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALV 226 (475)
T ss_pred HHHHHHHHh-----------cChHH-HHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHH
Confidence 998877532 25653 344444444444444334332211 11000 000000000000
Q ss_pred -----------HHH--------------HHHHHH----hhccchhHHHHHHHHHHHH-HHHHH--Hhhhcccc---cccc
Q 013318 242 -----------VSL--------------SKSITT----LLADVRMLLIIPLFAYSGL-QQAFV--WAEFTKEI---VTPA 286 (445)
Q Consensus 242 -----------~~~--------------~~~~~~----~l~~~~~~~l~~~~~~~g~-~~~f~--~~~~~~~~---~~~~ 286 (445)
... .+...+ ....+|.....+++...-. ...+. .+.++.+. .+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~ 306 (475)
T TIGR00924 227 FFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHE 306 (475)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcccc
Confidence 000 000000 0001122112221111111 01111 11122111 1111
Q ss_pred cc-c-chhHHHHHHHHHHHHHHHhhhh----ccccCCCCccch--HhHHHHHHHHHHHHHHh--hccCCCCccchhHHHH
Q 013318 287 LG-V-SGVGGAMAVYGAFDAICSLAAG----RLTTGLPSITFI--VSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLI 356 (445)
Q Consensus 287 ~~-~-~~~g~~~~~~~i~~~~g~~~~G----~l~d~~g~~~~~--i~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 356 (445)
.. . ...+.+.+..++..++.+++.. ++.||....... +.+|.++..++++...+ .+.++.....+.....
T Consensus 307 ~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~ 386 (475)
T TIGR00924 307 MLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVL 386 (475)
T ss_pred ccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHH
Confidence 11 1 1366777888888888887754 455542111112 24677766666532211 1111110111345667
Q ss_pred HHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHHHHHHHHHH
Q 013318 357 MAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 357 ~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~~----~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
..+++++|+....|..++++.+..|++ ++.+.|++.+...+|..++..+.+.. +....+..+.+.+++..+..+.
T Consensus 387 ~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 387 IYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999987 55578998888888887775554321 3344455555555555555656
Q ss_pred HHHHHHh
Q 013318 432 LTIQVEK 438 (445)
Q Consensus 432 ~~~~~~~ 438 (445)
+.++.+|
T Consensus 467 ~~~~~~k 473 (475)
T TIGR00924 467 MVPWLNR 473 (475)
T ss_pred HHHHHHh
Confidence 6666554
No 84
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.84 E-value=3.1e-18 Score=163.41 Aligned_cols=351 Identities=13% Similarity=0.116 Sum_probs=222.5
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHH
Q 013318 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (445)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~ 101 (445)
++..++.+...|++.-......-.+.|++.+..++++.. ...+|..|.++.+++|++.+|+|+|+.+++|..++.+
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~av 90 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAV 90 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHH
Confidence 334444443333333333233335677776667777654 4556778899999999999999999999999998887
Q ss_pred HHHHhh----hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHH
Q 013318 102 FVAANL----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (445)
Q Consensus 102 ~~~~~~----~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~ 177 (445)
..+.+. ..++..++.+-++.|.|.+.+-++.+.|++...+ |++..+-+.+.+.++.+|..+||+++
T Consensus 91 g~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~----------~~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 91 GAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGK----------PESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCC----------chhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 766652 4578888888899999999999999999999973 44566778999999999999999987
Q ss_pred HHhhcCccc---cccc---cC--CCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHH
Q 013318 178 LAVLKDDKV---CAAL---LG--GSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSIT 249 (445)
Q Consensus 178 ~~l~~~~~~---~~~~---~~--~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (445)
..+.-.... ..++ .. ...++ +..|...+.+..+..+.....|.|+.++.++ ++.+ .+.. ...
T Consensus 161 ~~lils~~~~~~~~~~~~~~~~~~~~~v-~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~-~~~~--~~~~------~~~ 230 (422)
T COG0738 161 SSLILSGVALTMSAAQILAIKGADASSV-QFPYLILAGLLVLLAVLILLSKLPDLQVAAP-SLGA--SGSA------GLS 230 (422)
T ss_pred HHHHHhhhhhccCHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHhccCCcCCcccc-cccc--cccc------hHH
Confidence 655431000 0000 00 00112 2445555444433333334455454322221 1100 0000 123
Q ss_pred HhhccchhHHH-HHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHH
Q 013318 250 TLLADVRMLLI-IPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGG 327 (445)
Q Consensus 250 ~~l~~~~~~~l-~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g 327 (445)
+++++|+++.- +-.|+|.|.+.+.+ ++++.+..+ .+++..+.+...+.++.+.++|++++-++.+|+..+|.+. ..
T Consensus 231 ~l~~~~~~~~gvl~~FlYVG~Eva~g-sfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~La-f~ 308 (422)
T COG0738 231 SLFQNKHLRLGVLAIFLYVGAEVAIG-SFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLA-FY 308 (422)
T ss_pred HHHhChHHHHHHHHHHHHHhHHHHHH-HHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH-HH
Confidence 56778887654 44577899987655 444444433 4555567788889999999999999999988998777443 33
Q ss_pred HHHHH-HHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhh
Q 013318 328 AIAQV-VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 328 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
+++.. .++. ..+.++ .+.+...++.|+..+...|+++++..+..|++.+.+ |..-....+|.++.+.+.
T Consensus 309 a~~~ill~~~---~~l~~g------~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~-s~~l~maivGGAiiP~l~ 378 (422)
T COG0738 309 ALIAILLLLA---VALIGG------VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVG-SGLLVMAIVGGAIIPPLQ 378 (422)
T ss_pred HHHHHHHHHH---HHHhcC------hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccccc-ceeeeeheecchHHHHHH
Confidence 33322 2221 123322 244555667789999999999999988888654433 222233345666655554
Q ss_pred cc
Q 013318 407 PY 408 (445)
Q Consensus 407 ~~ 408 (445)
++
T Consensus 379 G~ 380 (422)
T COG0738 379 GV 380 (422)
T ss_pred HH
Confidence 44
No 85
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.83 E-value=1.4e-17 Score=170.41 Aligned_cols=324 Identities=14% Similarity=0.087 Sum_probs=206.4
Q ss_pred HHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH--h--h--hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhh
Q 013318 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA--N--L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (445)
Q Consensus 70 ~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~--~--~--~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~ 143 (445)
....+.++++|.++||++|||+++.+-.+..+..+. . . ..+.+.+++..++.|++.+...|+..+++.+..
T Consensus 56 LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV--- 132 (524)
T PF05977_consen 56 LPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELV--- 132 (524)
T ss_pred HHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 344567889999999999999999988755432221 1 1 246777888899999999999999999999997
Q ss_pred hhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCc
Q 013318 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 223 (445)
Q Consensus 144 ~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~ 223 (445)
|+++..++.++.....+++..+||.+++.+....+. ...|.+-++..++.......++++.
T Consensus 133 -------~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~------------~~~f~inalsfl~~i~~l~~~~~~~ 193 (524)
T PF05977_consen 133 -------PKEDLPAANALNSISFNIARIIGPALGGILVAFFGA------------AAAFLINALSFLISILALLRWKPPP 193 (524)
T ss_pred -------cHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHccccc
Confidence 467889999999999999999999998876543321 2234444433333332223344322
Q ss_pred ccCcccccccchhhhhHHHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHH
Q 013318 224 DKGEKETADASVNFYSYLVSLSKSITTLLA-DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGA 301 (445)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i 301 (445)
+ +++. + +++..+.+++-.+..+ +|.+...+...+..++........+|....+ -+.+....|++++.+++
T Consensus 194 ~-~~~~--~-----~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gv 265 (524)
T PF05977_consen 194 P-PSSL--P-----RERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGV 265 (524)
T ss_pred c-cccc--c-----hhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHH
Confidence 1 1111 0 1122233334444333 4544433332333333322222333322211 23445578999999999
Q ss_pred HHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhcc
Q 013318 302 FDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK 381 (445)
Q Consensus 302 ~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~ 381 (445)
|.++|+++.+++.+|+++++ ++..+.++.+++++ .+.+.++ ....++..++.|++....++..++.+.+..|
T Consensus 266 Gai~Gal~~~~l~~~~~~~~-lv~~~~~~~a~~~~--~lal~~~-----~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P 337 (524)
T PF05977_consen 266 GAILGALLLPRLRRRLSSRR-LVLLASLLFALALL--LLALSPS-----FWLALIALFLAGAAWIIANSSLNTLVQLSVP 337 (524)
T ss_pred HHHHHHHHHHHhhcccCcch-hhHHHHHHHHHHHH--HHhcchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999988766 44556555554432 2344433 2455667778899888888888899999999
Q ss_pred CC-chhhHHHHHHHHHHHHHHHHHhh----cchhHHHHHHHHHHHHHHHHHHHHH
Q 013318 382 HD-TEGAFAQLKVWQCASIAVVFFIG----PYISLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 382 ~~-~~~a~~~~~~~~~~g~~ig~~i~----~~~~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
++ +++++|+++.....+..+|.++. ...+....+.+.++.++++.+...+
T Consensus 338 ~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 338 DWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 87 56688888877766666655444 3445666666655555555554443
No 86
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.82 E-value=5.7e-18 Score=168.96 Aligned_cols=314 Identities=16% Similarity=0.072 Sum_probs=185.8
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH----hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhh
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~----~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~ 140 (445)
.+++....++|+++++++.||+|||..+.++.+...+.... ...+++..++.+|++.|+..|.....+.-|+.|.+
T Consensus 66 vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~s 145 (485)
T KOG0569|consen 66 VSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEIS 145 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 55566667788899999999999999999988765543332 24689999999999999999999999999999998
Q ss_pred hhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhcc
Q 013318 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLR 220 (445)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~ 220 (445)
|++.||..-.....+..+|..+|..++.--.... ...|. .++....+.+++..++..++|
T Consensus 146 ----------P~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt---------~~~W~-~l~~~~~i~~~~~l~~l~~~P 205 (485)
T KOG0569|consen 146 ----------PKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGT---------EDLWP-YLLAFPLIPALLQLALLPFLP 205 (485)
T ss_pred ----------hhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCC---------CcchH-HHHHHHHHHHHHHHHHHhcCC
Confidence 4678999888877777777777766654222111 12464 233333444445555567888
Q ss_pred CCccc----Ccc-cccc---------c--chh-hh--hHHHH------HHHHHHHhhccchhHHHHHHHH----HHHHHH
Q 013318 221 KEEDK----GEK-ETAD---------A--SVN-FY--SYLVS------LSKSITTLLADVRMLLIIPLFA----YSGLQQ 271 (445)
Q Consensus 221 ~~~~~----~~~-~~~~---------~--~~~-~~--~~~~~------~~~~~~~~l~~~~~~~l~~~~~----~~g~~~ 271 (445)
|+++- +.+ ++.+ + +.. +. ...++ .....++.++++..+.-....+ .+.++.
T Consensus 206 ESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sG 285 (485)
T KOG0569|consen 206 ESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSG 285 (485)
T ss_pred CCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcC
Confidence 86541 111 1000 0 000 00 00000 1113456777766644322111 111111
Q ss_pred HHHHhhhcccc-cccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHH--HhhccCCC-C
Q 013318 272 AFVWAEFTKEI-VTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI--LINYSVTS-G 347 (445)
Q Consensus 272 ~f~~~~~~~~~-~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~--~~~~~~~~-~ 347 (445)
......|...+ .+.++...+.-+.....++.+.+.+++..++.||.|||.. ++.+..+..++.+.. .+...... .
T Consensus 286 i~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpL-ll~~~~~~~~~~~~~~~~~~l~~~~~~ 364 (485)
T KOG0569|consen 286 INAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPL-LLISLSLMAVALLLMSIALFLSNSFGS 364 (485)
T ss_pred cceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 11111222222 3345666667788889999999999999999999999874 455555444432211 11111111 1
Q ss_pred ccchhHHHHHHHHHhhhhhh-hhhhhhHHHHhhccCCchh-hHHHHHHHHHHHHH
Q 013318 348 VLGTLYPLIMAALLGIGDGV-LNTQLSALLGILFKHDTEG-AFAQLKVWQCASIA 400 (445)
Q Consensus 348 ~~~~~~~~~~~~l~G~~~~~-~~~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ 400 (445)
+. ......+.+++.+..+. ..|..+-+.+|++|++.|+ +.++-...+.++..
T Consensus 365 ~~-~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~f 418 (485)
T KOG0569|consen 365 WL-SYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNF 418 (485)
T ss_pred HH-HHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHH
Confidence 00 01122334444444443 3467778899999877554 66666666655554
No 87
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=99.82 E-value=1.6e-19 Score=153.91 Aligned_cols=142 Identities=37% Similarity=0.712 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHhhhHhhhhhh----cc------CCCCchHHHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHH
Q 013318 33 LSCAFLLIFLAYGAAQNLETTV----NT------EGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (445)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~i----~~------~~~~g~~~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~ 102 (445)
|+++|+++|.+|++.+++++++ ++ +++.|+.++++.|..++++++++|.+.+++|+|+.+++|.+++.+|
T Consensus 1 Lg~~f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y 80 (156)
T PF05978_consen 1 LGIGFMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIY 80 (156)
T ss_pred CchHHHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4789999999999998877765 22 3678999999999999999999999999999999999999999999
Q ss_pred HHHhhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhc
Q 013318 103 VAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (445)
Q Consensus 103 ~~~~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~ 182 (445)
.+++++|+.+.++++.++.|+|++.+|++++.|+++++ ++++|++..|++|+..+.+.++|+++...+.+
T Consensus 81 ~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s----------~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 81 IASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS----------TEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC----------CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999997 46789999999999999999999999887765
Q ss_pred Cc
Q 013318 183 DD 184 (445)
Q Consensus 183 ~~ 184 (445)
..
T Consensus 151 ~~ 152 (156)
T PF05978_consen 151 GQ 152 (156)
T ss_pred CC
Confidence 43
No 88
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.1e-17 Score=170.51 Aligned_cols=372 Identities=14% Similarity=0.107 Sum_probs=236.5
Q ss_pred hHHHHHHHHHHHHHHh---hhHhhhhhhccCCCCc----hHHHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHH
Q 013318 30 VHILSCAFLLIFLAYG---AAQNLETTVNTEGNLG----TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (445)
Q Consensus 30 ~~~l~~~~~~~~~~~~---~~~~~~~~i~~~~~~g----~~~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~ 102 (445)
|+++..+|++....+. +...+.+.+.++.+-+ .+..++..+...++.++.+.+.||+|.|++.+.|.++.++.
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 3444455555554443 2223445554443332 23355666667778899999999999999999999988876
Q ss_pred HHH-hhhcchhh-HHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 103 VAA-NLFPSWYT-MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 103 ~~~-~~~~~~~~-li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
.+. .+.++++. ++...++.|+|.|..+..+-..+..++ ++||+.+.|+..+...+|.++=|.+.-.+
T Consensus 125 ~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-----------~kkR~lA~Gia~~GsG~G~~~~~~l~~~l 193 (509)
T KOG2504|consen 125 LLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-----------EKKRALATGIAVSGTGVGTVVFPPLLKYL 193 (509)
T ss_pred HHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-----------HHHHHHHHhhhhccCCcceeeHHHHHHHH
Confidence 664 46676654 456799999999999999999998886 67999999998887777776655555544
Q ss_pred hcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCccc--Cc-------------------------cccccc
Q 013318 181 LKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK--GE-------------------------KETADA 233 (445)
Q Consensus 181 ~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~--~~-------------------------~~~~~~ 233 (445)
... .|||.. ..++..+.+-.++.....++.... ++ ++....
T Consensus 194 ~~~-----------~G~r~~-~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (509)
T KOG2504|consen 194 LSK-----------YGWRGA-LLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLK 261 (509)
T ss_pred HHH-----------hCcHHH-HHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCC
Confidence 432 467653 334555554333333444431000 00 000000
Q ss_pred c------------hhhhh--HHHHHHH-HHHHhhccchhHHHHHH--HHHHHHHHHHHHhhhcccccccccccchhHHHH
Q 013318 234 S------------VNFYS--YLVSLSK-SITTLLADVRMLLIIPL--FAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAM 296 (445)
Q Consensus 234 ~------------~~~~~--~~~~~~~-~~~~~l~~~~~~~l~~~--~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~ 296 (445)
+ .++.. +.+.... --++++|||.++.+... +.+.|+...+. .++.+..+.+++.+..++.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~--~l~~~~~~~g~~~~~aa~l~ 339 (509)
T KOG2504|consen 262 KLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFV--YLPSYAKSLGLSSNDAAFLL 339 (509)
T ss_pred cccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHH--HHHHHHhhcCCChhhhHHHH
Confidence 0 00000 0011010 01467888887765442 33334333221 22322234566667888999
Q ss_pred HHHHHHHHHHHhhhhccccCCCCccch-HhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHH
Q 013318 297 AVYGAFDAICSLAAGRLTTGLPSITFI-VSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSAL 375 (445)
Q Consensus 297 ~~~~i~~~~g~~~~G~l~d~~g~~~~~-i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 375 (445)
+..++...+++++.|++.|+...++.. ..++.+...++.. ...... + +..+.....++|++.+.+....+-+
T Consensus 340 Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~--~~p~~~--~---~~~l~~~~~~fG~~~g~~~~l~~~i 412 (509)
T KOG2504|consen 340 SIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARL--FLPFAT--T---YVGLIVFSILFGFCVGSFSSLTPVI 412 (509)
T ss_pred HHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHH--HHHHhc--c---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998743323 2333333333321 112221 2 3567788889999999998888888
Q ss_pred HHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 376 LGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY-----ISLQAMLIVMVVGICVALVGILFLT 433 (445)
Q Consensus 376 l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~ 433 (445)
+.++.+.++ ..++|+..++++++..+|+-+.+. .+|...++...++.+++...++...
T Consensus 413 ~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 413 LVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999998665 458999999999999887766643 3588888888888888887776655
No 89
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.81 E-value=1.1e-16 Score=150.54 Aligned_cols=341 Identities=13% Similarity=0.078 Sum_probs=224.7
Q ss_pred hhhhhhccCCCCchHHHHHH----HHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhhhcchhhHHhHHHHhhhh
Q 013318 49 NLETTVNTEGNLGTISLGIL----YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFA 124 (445)
Q Consensus 49 ~~~~~i~~~~~~g~~~~~~~----~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~~~~~~~li~~r~l~Gig 124 (445)
++.+++.++.+++....+.+ ..++++.+++++++.+|+|.++.+..++++.++....-...+...++..-++.|.|
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~G~g 112 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLAGAG 112 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhh
Confidence 55666777788887765554 34788999999999999999999999998887777765445777777889999999
Q ss_pred hHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHH
Q 013318 125 ASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIV 204 (445)
Q Consensus 125 ~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i 204 (445)
.+...+--...+-+.+ |++-+..+|+|....+.|..+++.+...+.++. .+||..+..
T Consensus 113 Iav~nVLLPslIK~~F-----------pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~----------~gW~~aL~~- 170 (395)
T COG2807 113 IAVINVLLPSLIKRDF-----------PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS----------GGWRGALGF- 170 (395)
T ss_pred HHHHHHhhhHHHHhhc-----------ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh----------ccHHHHHHH-
Confidence 9987777777776664 678999999999999999999988877776554 257743222
Q ss_pred HHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc
Q 013318 205 FLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT 284 (445)
Q Consensus 205 ~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~ 284 (445)
-+..++++.+ .++|+..+++..+.+. .. ++..+++|+|.-|.+...+=++........+|+|+.+.+
T Consensus 171 WAl~allAl~--~WlPq~~r~~~~~~~~---~~--------~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~ 237 (395)
T COG2807 171 WALLALLALL--IWLPQALREQAASIAT---KL--------VSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID 237 (395)
T ss_pred HHHHHHHHHH--HHhhhccccccccccc---cc--------ccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 2233333333 4566532211111000 00 011246888888877543222322223335899999999
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhh
Q 013318 285 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 364 (445)
Q Consensus 285 ~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 364 (445)
++++..+.|.+.+...+.++..++....+.+|...++.+......++.++++- +.+.|... ...+ .+++|+|
T Consensus 238 ~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G--~~~~P~~~----~~lw--~~llG~G 309 (395)
T COG2807 238 RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVG--LLLAPGQL----PILW--ALLLGLG 309 (395)
T ss_pred cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH--HHHhhhhH----HHHH--HHHHhCc
Confidence 99998899999999999999999999999987655554544444555555431 22443321 2223 5889999
Q ss_pred hhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHH---HHHHHHhh-----cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 365 DGVLNTQLSALLGILFKHDTEGAFAQLKVWQCAS---IAVVFFIG-----PYISLQAMLIVMVVGICVALVGILFLT 433 (445)
Q Consensus 365 ~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g---~~ig~~i~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~ 433 (445)
.+...+...+++.+..++.++.+ ..-.+.|++| ++.|+.+. ...++....+.++...+...+.-++..
T Consensus 310 ~G~~F~laL~li~~rs~~a~~Aa-~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 310 QGGAFPLALTLILLRSSDAAIAA-ALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred cchHHHHHHHHHHhhcCChHHHH-HHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999988888888876544432 3444444444 34444333 334566666666555555555444443
No 90
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.79 E-value=1.2e-15 Score=156.99 Aligned_cols=390 Identities=11% Similarity=0.114 Sum_probs=211.2
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhh-hhhhccCCCCchHHHHHHHHH----HHHhhhhHHHHHHH-hCcchhhhhhhHHH
Q 013318 26 YTRDVHILSCAFLLIFLAYGAAQNL-ETTVNTEGNLGTISLGILYTS----FTCFSLVASLVVRV-LGSKNALILGTTGY 99 (445)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~~~~~~g~~~~~~~~~~----~ai~~l~~g~l~dr-~G~k~~l~~g~~~~ 99 (445)
.++.++.+.+..++.-.+++..... ...+.++.+++.......+.. .....++.|++.|| +|||+++.++.+++
T Consensus 19 ~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~ 98 (500)
T PRK09584 19 QPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVL 98 (500)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 3456666666666666666555543 334445556655433333222 22344679999999 59999999999887
Q ss_pred HHHHHHh-hh-cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHH
Q 013318 100 WLFVAAN-LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (445)
Q Consensus 100 ~~~~~~~-~~-~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~ 177 (445)
.+..... .. ++...+++.|+++|+|.|...+...++++++.++ ++++|++++++++.+.++|..+||+++
T Consensus 99 ~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~--------~~~~~~~~~~~~~~~~~iG~~~gp~i~ 170 (500)
T PRK09584 99 AIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEK--------DDPRLDGAFTMYYMSINIGSFFSMLAT 170 (500)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCC--------CchhhhhcchHHHHHHHHHHHHHHHHH
Confidence 7654443 33 3455666789999999999888888899998752 234566788988899999999999998
Q ss_pred HHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHH----hccCCcccCccc-ccccchh----------------
Q 013318 178 LAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMC----FLRKEEDKGEKE-TADASVN---------------- 236 (445)
Q Consensus 178 ~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~----~l~~~~~~~~~~-~~~~~~~---------------- 236 (445)
..+..+ .|||. .|.+..+...++.+..+ .+++..++++++ .+.....
T Consensus 171 g~l~~~-----------~g~~~-~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
T PRK09584 171 PWLAAK-----------YGWSV-AFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWL 238 (500)
T ss_pred HHHHHh-----------hCHHH-HHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHH
Confidence 877533 35764 34444443344433222 233221111100 0000000
Q ss_pred -hhhHHHH------------H-HHHHHH--hhccchhHHHHHHHHHHHHHHHHH--Hhhhccccc-------ccc-cccc
Q 013318 237 -FYSYLVS------------L-SKSITT--LLADVRMLLIIPLFAYSGLQQAFV--WAEFTKEIV-------TPA-LGVS 290 (445)
Q Consensus 237 -~~~~~~~------------~-~~~~~~--~l~~~~~~~l~~~~~~~g~~~~f~--~~~~~~~~~-------~~~-~~~~ 290 (445)
...+... . .+...+ -..++|.+...+.+. ... .|+ ....+..+. ++. .+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i--~f~~~~~q~~~~l~~~~~~~~~~~~~g~~ 315 (500)
T PRK09584 239 LHNQEIARMALGVVALGIVVIFGKEAFAMKGAARRKMIVAFILML-EAI--IFFVLYSQMPTSLNFFAIRNVEHSILGIA 315 (500)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HHH--HHHHHHHHhccHHHHHHHHhccccccceE
Confidence 0000000 0 000000 011223332222221 111 111 011111110 111 1211
Q ss_pred -hhHHHHHHHHHHHHHHHhhh----hccccCCCCccchHhHHHHHHHHHHHHHHh--hccCCCCccchhHHHHHHHHHhh
Q 013318 291 -GVGGAMAVYGAFDAICSLAA----GRLTTGLPSITFIVSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGI 363 (445)
Q Consensus 291 -~~g~~~~~~~i~~~~g~~~~----G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G~ 363 (445)
..+.+.+...+..++..++. +++.||.+..+ .+.+|.++.+++++.+.. ...++.............+++|+
T Consensus 316 i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~-~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ 394 (500)
T PRK09584 316 VEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPH-KFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSI 394 (500)
T ss_pred ECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH
Confidence 24455566676666666555 66666665444 346777777766543211 11111111112346667889999
Q ss_pred hhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhh-----cc------h---hHHHHHHHHHHHHHHHHHH
Q 013318 364 GDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG-----PY------I---SLQAMLIVMVVGICVALVG 428 (445)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~-----~~------~---~~~~~~~i~~~~~~~~~~~ 428 (445)
|+....|...+++.+..|++.+ ..+|.+.+...+|..++-.+. +. . .+.+.+..+++.+++..+.
T Consensus 395 ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~ 474 (500)
T PRK09584 395 GELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVL 474 (500)
T ss_pred HHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998754 578877776666665543232 11 1 2456666666655545544
Q ss_pred HHHHHHHHHhh
Q 013318 429 ILFLTIQVEKA 439 (445)
Q Consensus 429 ~~~~~~~~~~~ 439 (445)
.+.+.++.+|.
T Consensus 475 ~~~~~~~~~k~ 485 (500)
T PRK09584 475 MLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHH
Confidence 44555544443
No 91
>PTZ00207 hypothetical protein; Provisional
Probab=99.79 E-value=1e-16 Score=164.84 Aligned_cols=119 Identities=13% Similarity=0.062 Sum_probs=90.8
Q ss_pred hHhhhhhhccCCCCchHHHHHHH---HHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hh------cchhhHHh
Q 013318 47 AQNLETTVNTEGNLGTISLGILY---TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF------PSWYTMVP 116 (445)
Q Consensus 47 ~~~~~~~i~~~~~~g~~~~~~~~---~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~------~~~~~li~ 116 (445)
...+.+.+.++.+++....+.+. ..++.+++++|++.||+|+|++++++.+++.+..+.. .. ++++.+++
T Consensus 46 fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l 125 (591)
T PTZ00207 46 FNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSV 125 (591)
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 34556666666666554433322 2345567789999999999999999999887765543 32 58889999
Q ss_pred HHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHH
Q 013318 117 ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (445)
Q Consensus 117 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li 176 (445)
.|++.|+|.+..+++....+.+|+ |++||++.|+...+.++|.++.+.+
T Consensus 126 ~r~l~G~G~~~~~~~~~~~i~~~F-----------p~~RG~a~Gi~~~~~gLGsaI~~~l 174 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVVTVLSVF-----------PSNRGAVVAIMKTFTGLGSAILGSI 174 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-----------hhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888888886 4789999999999999999764433
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.78 E-value=9.4e-17 Score=162.44 Aligned_cols=324 Identities=13% Similarity=0.060 Sum_probs=185.0
Q ss_pred hhccCCCCchHHHHHHHH----HHHHhhhhHHHHHHH----hCcch-hhhhhhHHHHHHHHHh-hhcc------hhhHHh
Q 013318 53 TVNTEGNLGTISLGILYT----SFTCFSLVASLVVRV----LGSKN-ALILGTTGYWLFVAAN-LFPS------WYTMVP 116 (445)
Q Consensus 53 ~i~~~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr----~G~k~-~l~~g~~~~~~~~~~~-~~~~------~~~li~ 116 (445)
.+.++.+++....+.+.. ..++.+++.|+++|| +|||| .++++.....+..+.. ..|+ ...++.
T Consensus 25 ~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 104 (437)
T TIGR00792 25 FYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYI 104 (437)
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 344456666655555444 457788999999998 67755 5666766666544433 3332 234456
Q ss_pred HHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCC
Q 013318 117 ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTS 196 (445)
Q Consensus 117 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~ 196 (445)
.+++.+++.+...+...++..+..+ +++||++..++...+..+|..+++.+...+...... + ....+
T Consensus 105 ~~~~~~~~~~~~~~~~~al~~~~~~---------~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~-~---~~~~g 171 (437)
T TIGR00792 105 TYILLGLFYSFVNIPYWSLVPAITL---------DPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG-G---DDKFG 171 (437)
T ss_pred HHHHHHHHHHhhcccHhhCcccccC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---ccccc
Confidence 6788888887766666666666652 467899999988877777776666554333221110 0 01246
Q ss_pred cchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 013318 197 GTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW 275 (445)
Q Consensus 197 w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~ 275 (445)
|+. .+.+.+++.++..++. +++||++++++++ ++ ++.+.++ ..++.+|+|+++......+.........
T Consensus 172 ~~~-~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~-~~----~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~- 241 (437)
T TIGR00792 172 WFM-FALVLALIGVVSLIICFFGTKERYSEIPKN-IE----KKLSLKQ---IFKALFKNDQLLILCLAYLFYNLAFNIK- 241 (437)
T ss_pred HHH-HHHHHHHHHHHHHHHHHcCCEecCCCCCcc-cc----cCCCHHH---HHHHHhCCHHHHHHHHHHHHHHHHHHHH-
Confidence 753 3444444444433332 3455543211111 00 0112222 2334678888876554444333322111
Q ss_pred hhhcccccccccc-cchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHH
Q 013318 276 AEFTKEIVTPALG-VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYP 354 (445)
Q Consensus 276 ~~~~~~~~~~~~~-~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (445)
..+..++.+..++ ....+.......++.+++.++.+++.||+|+|+. +..+.++..++.+. ..+.+++ ....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~-~~~~~~~~~~~~~~--~~~~~~~----~~~~ 314 (437)
T TIGR00792 242 NGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKIL-FAGGILLMVLGYLI--FFFAGSN----LPLI 314 (437)
T ss_pred cchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHH--HHHcchh----HHHH
Confidence 1112222222223 2345566667789999999999999999998874 45666655554432 2222221 1334
Q ss_pred HHHHHHHhhhhhhhhhhhhHHHHhhcc-------CC-chhhHHHHHHHHHHHHHHHHHhh
Q 013318 355 LIMAALLGIGDGVLNTQLSALLGILFK-------HD-TEGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 355 ~~~~~l~G~~~~~~~~~~~~~l~~~~~-------~~-~~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
.+..++.|++.+..++..+++++|..| ++ ++.++|++++.+.+|..++..+.
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 315 LVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 556667888888888888899888765 22 23467888888888776664443
No 93
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.76 E-value=5.3e-15 Score=147.57 Aligned_cols=343 Identities=11% Similarity=-0.002 Sum_probs=182.2
Q ss_pred hHhhhhhhccCCCCchHHHHHHH--HHHHHhhhhHHH-----HHHHhCcchhhhhhhHHH-H--HHHHHhh--hcc-hhh
Q 013318 47 AQNLETTVNTEGNLGTISLGILY--TSFTCFSLVASL-----VVRVLGSKNALILGTTGY-W--LFVAANL--FPS-WYT 113 (445)
Q Consensus 47 ~~~~~~~i~~~~~~g~~~~~~~~--~~~ai~~l~~g~-----l~dr~G~k~~l~~g~~~~-~--~~~~~~~--~~~-~~~ 113 (445)
.....|...++.+.+....+.+. ....+..++.++ ..||+||||.++++..+. . +...... ..+ ...
T Consensus 20 ~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (390)
T TIGR02718 20 AMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGW 99 (390)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHH
Confidence 33556666677778877766653 222344444444 456689999976665332 2 1122212 112 112
Q ss_pred HHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCC
Q 013318 114 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGG 193 (445)
Q Consensus 114 li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~ 193 (445)
++..-.+.++..+...+....+..+.. ++++++...+.......+|.++|+.....+..+
T Consensus 100 ~~~~~~~~~~~~a~~d~~~d~~~~~~~----------~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~---------- 159 (390)
T TIGR02718 100 AVGLLACASLASATQDIATDGMAAEHF----------NGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK---------- 159 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC----------CHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 222333344444444444443433332 345566666666666677777777665555432
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 013318 194 STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF 273 (445)
Q Consensus 194 ~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f 273 (445)
.+||. .|.+.+++.++..+..+++++++++++++ + +. ..++..+.+|+|+++......+........
T Consensus 160 -~gw~~-~f~~~a~l~~~~~~~~~~~~~~~~~~~~~--~-----~~----~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 226 (390)
T TIGR02718 160 -FGQRP-AFLLVACVPLASLVCVLWLKDRAVASPEA--P-----LA----RRASLFRFFRRPLAWSLLALALLSAMTAVS 226 (390)
T ss_pred -hCHHH-HHHHHHHHHHHHHHHHHHcCCCCcCcccc--c-----hh----hHHHHHHHHcCcCHHHHHHHHHHHHHHHHH
Confidence 35764 55555555555444445555432211110 0 00 112345678888876555443333332222
Q ss_pred HHhhhcccccccccccchhHHHHHHHHH-HHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHh-hc-cCCCCccc
Q 013318 274 VWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NY-SVTSGVLG 350 (445)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i-~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~-~~-~~~~~~~~ 350 (445)
..+..+.++.+.+++.+++|.+....++ ...++.++.|++.||+++|+.+ ..+.++..+.....+. .. ...+.
T Consensus 227 ~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~--- 302 (390)
T TIGR02718 227 GFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF-ILGVGLAGSLALLWFAQAAFWLAPG--- 302 (390)
T ss_pred HHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHHHHHHHHHHHHHcccCCc---
Confidence 2234444455556777788988777765 5567788999999999988744 4454443222111111 11 00111
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhhHHHHhhccC-C-chhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHH
Q 013318 351 TLYPLIMAALLGIGDGVLNTQLSALLGILFKH-D-TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICV 424 (445)
Q Consensus 351 ~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~-~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~ 424 (445)
....+....+.+++.+...+..++...+..++ + +++.++.++...++|..+|..+.+. .++...+...+++.++
T Consensus 303 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~ 382 (390)
T TIGR02718 303 IAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVL 382 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 12233334444556666666667776676654 3 4567898888888888887766654 3444555555554444
Q ss_pred HH
Q 013318 425 AL 426 (445)
Q Consensus 425 ~~ 426 (445)
+.
T Consensus 383 a~ 384 (390)
T TIGR02718 383 AI 384 (390)
T ss_pred HH
Confidence 43
No 94
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.75 E-value=9.8e-17 Score=168.80 Aligned_cols=274 Identities=15% Similarity=0.052 Sum_probs=167.3
Q ss_pred hhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhhhc---------------
Q 013318 49 NLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFP--------------- 109 (445)
Q Consensus 49 ~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~~~--------------- 109 (445)
...+++.++.+++... .+.....++++.++.+++.||.|||+.+.+|.+++++..+.+..|
T Consensus 54 ~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~ 133 (633)
T TIGR00805 54 SSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSS 133 (633)
T ss_pred hhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccc
Confidence 3445665555555443 344555677888999999999999999999998887766543211
Q ss_pred -------------------------------------chhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCcc
Q 013318 110 -------------------------------------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEG 152 (445)
Q Consensus 110 -------------------------------------~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~ 152 (445)
.+..++++|+++|+|.+..++...+|+.|+. ++
T Consensus 134 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~----------~~ 203 (633)
T TIGR00805 134 TGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFA----------KS 203 (633)
T ss_pred cccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccC----------Cc
Confidence 2456778999999999999999999999997 57
Q ss_pred chhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccc---c-c---c-cc-CCCC--CcchhHHHHHHHHHHHHHHHHHhccC
Q 013318 153 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKV---C-A---A-LL-GGST--SGTTLLFIVFLGVITLGTILMCFLRK 221 (445)
Q Consensus 153 ~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~---~-~---~-~~-~~~~--~w~~~~~~i~~~l~~~~~~l~~~l~~ 221 (445)
++|++++|++++...+|+.+|++++..+.....+ . . . ++ +..| +|| ..|.+.+++.++..+..+++|+
T Consensus 204 ~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWw-l~Fli~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 204 KNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWW-IGFLICGGVALLTSIPFFFFPK 282 (633)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHH-HHHHHHHHHHHHHHHHHHhCcc
Confidence 8999999999999999999999998876643210 0 0 0 00 0000 143 3354445544444444445554
Q ss_pred Cccc--Ccc--cccccc---h--hh-----hhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cc
Q 013318 222 EEDK--GEK--ETADAS---V--NF-----YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PA 286 (445)
Q Consensus 222 ~~~~--~~~--~~~~~~---~--~~-----~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~ 286 (445)
+.++ +++ +..+++ . .+ ....++..+..++++|||.++......+...........+.|+++.+ .+
T Consensus 283 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g 362 (633)
T TIGR00805 283 ALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYG 362 (633)
T ss_pred ccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2211 100 000000 0 00 01122334456678999988776554433322222223455555422 34
Q ss_pred cccchhHHHHHHHHH-HHHHHHhhhhccccCCCCcc-chHhHHHHHHHH
Q 013318 287 LGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSIT-FIVSGGAIAQVV 333 (445)
Q Consensus 287 ~~~~~~g~~~~~~~i-~~~~g~~~~G~l~d~~g~~~-~~i~~g~~~~~~ 333 (445)
++.++.+++.....+ +.++|.++.|+++||++.+. ..+..+.++..+
T Consensus 363 ~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~ 411 (633)
T TIGR00805 363 ISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTL 411 (633)
T ss_pred CcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHH
Confidence 555677887776665 56789999999999987432 233444444333
No 95
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=5.2e-16 Score=146.53 Aligned_cols=312 Identities=14% Similarity=0.046 Sum_probs=186.6
Q ss_pred HHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhc
Q 013318 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (445)
Q Consensus 68 ~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~ 146 (445)
+.....++++..|.++||+|||++++.|.+...++-.. ....|+..++.+|++.|+-.|-+-+. -++++|..
T Consensus 77 F~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~-rAiisdV~------ 149 (451)
T KOG2615|consen 77 FSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVI-RAIISDVV------ 149 (451)
T ss_pred HHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHH-HHHHHhhc------
Confidence 44455667778899999999999999999877765444 36778866666799999998876655 67888887
Q ss_pred cCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHH----HHHHHhccCC
Q 013318 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLG----TILMCFLRKE 222 (445)
Q Consensus 147 ~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~----~~l~~~l~~~ 222 (445)
+||+|++.++.....+++|.++||.++.++.+..... + .-|. +..-.+..+.+ +...+++||+
T Consensus 150 ----sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~-----g-~~p~---alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 150 ----SEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSIS-----G-SYPF---ALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred ----ChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhh-----c-cCch---HHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4789999999999999999999999999887622110 0 1122 22111111111 2234778875
Q ss_pred cccCcccccccchhhhhHHHHHHH-----HHHHhhccchhHHHH--------HHHHHHHHHHHHHHhhhcccccccccc-
Q 013318 223 EDKGEKETADASVNFYSYLVSLSK-----SITTLLADVRMLLII--------PLFAYSGLQQAFVWAEFTKEIVTPALG- 288 (445)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~l~--------~~~~~~g~~~~f~~~~~~~~~~~~~~~- 288 (445)
-+.++++..+.+..+..+.+++.. .-...+||++..-.+ -.+.|.-+. ..+ ..+...+.+.+++
T Consensus 217 L~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~-s~~-~~t~~~l~~~rfg~ 294 (451)
T KOG2615|consen 217 LPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELF-SGL-ENTVLFLTHGRFGY 294 (451)
T ss_pred ccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHH-HHH-HhhHHHhhcCccCC
Confidence 432221100000000000000000 011234444322100 011111111 111 1112222223344
Q ss_pred -cchhHHHHHHHHHHHHHHHhhhhccccCCCC-ccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhh
Q 013318 289 -VSGVGGAMAVYGAFDAICSLAAGRLTTGLPS-ITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 366 (445)
Q Consensus 289 -~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~-~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 366 (445)
..+.|.+....|+...+.+....+..||.+. .+..+..+..+..-.++ ++.+...+ ..++....+..++.+
T Consensus 295 ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~l--lls~~~~~-----~~l~~~s~l~sf~~A 367 (451)
T KOG2615|consen 295 SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFL--LLSLARTP-----VVLYLGSTLKSFSTA 367 (451)
T ss_pred ChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHH--HHhccccc-----hhhhHHHHHHHHHHH
Confidence 4467887777777777777777777777541 12233333333322322 34555442 457788888999999
Q ss_pred hhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc
Q 013318 367 VLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 408 (445)
Q Consensus 367 ~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~ 408 (445)
...|.+..+.....|++ ++++.|+.+...+++-++|+.+++.
T Consensus 368 ~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~ 410 (451)
T KOG2615|consen 368 SVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGV 410 (451)
T ss_pred HhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhe
Confidence 99999999999998876 5567899999999999999988843
No 96
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.71 E-value=2.3e-15 Score=155.60 Aligned_cols=139 Identities=19% Similarity=0.194 Sum_probs=105.0
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhh
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~ 143 (445)
.+..+...+++++++|+++|++|||++++++.+.+.+..+.. .++|+..++++|++.|+|.|........|++|.+
T Consensus 95 ~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEia--- 171 (513)
T KOG0254|consen 95 TSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIA--- 171 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcC---
Confidence 455566677899999999999999999999999888876654 7889999999999999999999999999999998
Q ss_pred hhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCc
Q 013318 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 223 (445)
Q Consensus 144 ~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~ 223 (445)
|++.||...+.++.....|..+|..++...... .++||. .+.+..+.+++..+..+++||++
T Consensus 172 -------p~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~----------~~~Wr~-~~~~~~i~~~~~~~~~~~~pesp 233 (513)
T KOG0254|consen 172 -------PAHIRGTLVSLYQLFITIGILLGYCINYGTSKV----------YAGWRI-PLGLALIPAVILALGMLFLPESP 233 (513)
T ss_pred -------ChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC----------CccHHH-HHHHHHHHHHHHHHHHHhCCCCh
Confidence 467999999999888888877775554433211 036873 33333333333333356777654
Q ss_pred c
Q 013318 224 D 224 (445)
Q Consensus 224 ~ 224 (445)
+
T Consensus 234 ~ 234 (513)
T KOG0254|consen 234 R 234 (513)
T ss_pred H
Confidence 3
No 97
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.69 E-value=2.9e-17 Score=148.72 Aligned_cols=355 Identities=14% Similarity=0.203 Sum_probs=201.8
Q ss_pred HHHHhhhHhhhhhhccCCCCchHHHHHHHHHHH----HhhhhHHHHHHH-hCcchhh-hhhhHH---HHHHHHHhhhcch
Q 013318 41 FLAYGAAQNLETTVNTEGNLGTISLGILYTSFT----CFSLVASLVVRV-LGSKNAL-ILGTTG---YWLFVAANLFPSW 111 (445)
Q Consensus 41 ~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~a----i~~l~~g~l~dr-~G~k~~l-~~g~~~---~~~~~~~~~~~~~ 111 (445)
|.+|+....++..+..+.++.+.....+|..+. +-+++.|+++|| +|.|+.- +.+.++ ..+++++...+.+
T Consensus 57 yfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aF 136 (459)
T KOG4686|consen 57 YFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAF 136 (459)
T ss_pred eeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 666778888888887777777766666666553 566789999995 7877633 333332 2344445567899
Q ss_pred hhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCcccccccc
Q 013318 112 YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALL 191 (445)
Q Consensus 112 ~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~ 191 (445)
++++..|++.|+|.-..-++|++|...|+ ..||.+.++|++-+..-+|..+--.+...+...... .
T Consensus 137 w~M~~GRF~FGIGgESlAVaQN~yav~wF----------KGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~----~ 202 (459)
T KOG4686|consen 137 WTMLAGRFLFGIGGESLAVAQNKYAVYWF----------KGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGR----M 202 (459)
T ss_pred HHHHhhheeeccCchhhhhhhcceeEEEe----------cCccccchhhHHHHHHHhhceeeeeecHHHHHHHHH----h
Confidence 99999999999999999999999999887 478999999999887777766544333333322110 0
Q ss_pred CCCCCcchh--HHHHHHHH-HHHHHHHHH---hccCCcc-cCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHH
Q 013318 192 GGSTSGTTL--LFIVFLGV-ITLGTILMC---FLRKEED-KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF 264 (445)
Q Consensus 192 ~~~~~w~~~--~~~i~~~l-~~~~~~l~~---~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 264 (445)
.+..+ ++. ++..+.+. +....+... +.+++.+ .-.++ +....+.++. + +. + -..|.+|.+..
T Consensus 203 ~~~~g-hT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e--~g~~Ge~pkL-t---dv-~-~f~ppfw~~~i-- 271 (459)
T KOG4686|consen 203 FPGVG-HTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLE--EGFLGEEPKL-T---DV-N-TFYPPFWVLVI-- 271 (459)
T ss_pred cccch-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhh--cCcccCCccc-c---cc-c-ccCccHHHHHH--
Confidence 00011 110 01111111 111111111 1111111 00000 0000000000 0 00 1 12345555432
Q ss_pred HHHHHHHHHHHhhhcc-----ccccccccc--chhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHH
Q 013318 265 AYSGLQQAFVWAEFTK-----EIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW 337 (445)
Q Consensus 265 ~~~g~~~~f~~~~~~~-----~~~~~~~~~--~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~ 337 (445)
++..|+..++|. .+-.+.+|. ...+-+.+..-..+++.++++|.++||.|++..++..+.+...++-..
T Consensus 272 ----icv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~ 347 (459)
T KOG4686|consen 272 ----ICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSG 347 (459)
T ss_pred ----HHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhh
Confidence 223333344432 121222343 345556665555567888999999999998865544444444433221
Q ss_pred HHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhc--------c
Q 013318 338 ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP--------Y 408 (445)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~--------~ 408 (445)
+.++. .-+++...++|+..+..--..+..++.+.|++ .+++||..+.+|++|-++..++++ +
T Consensus 348 --l~Ft~-------lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y 418 (459)
T KOG4686|consen 348 --LFFTF-------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSY 418 (459)
T ss_pred --HHhhh-------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCch
Confidence 22221 12456677888887777666778888899987 467999999999999877666653 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 409 ISLQAMLIVMVVGICVALVGILFLT 433 (445)
Q Consensus 409 ~~~~~~~~i~~~~~~~~~~~~~~~~ 433 (445)
...+.-+.+...+.+.+....+.+.
T Consensus 419 ~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 419 DNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhee
Confidence 3455555555555555554444333
No 98
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.69 E-value=4.1e-14 Score=144.94 Aligned_cols=308 Identities=11% Similarity=0.077 Sum_probs=174.6
Q ss_pred HHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhc
Q 013318 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (445)
Q Consensus 68 ~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~ 146 (445)
.....++++++.|+++|.+|||+.++.+.++..+..+.. .++|..+++.+-++.|+|.|..... ...++|..
T Consensus 87 ~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~-~~~isEl~------ 159 (599)
T PF06609_consen 87 WTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELA-ALAISELV------ 159 (599)
T ss_pred HHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHH-HHHHHHhc------
Confidence 344677889999999999999999999999888877654 7899999999999999999887654 33467776
Q ss_pred cCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHH-HHhccCCccc
Q 013318 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDK 225 (445)
Q Consensus 147 ~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l-~~~l~~~~~~ 225 (445)
|.+.|+...++....+-....+|+.++..+..+ .+||. .|.+..++..+++++ .+|..+|++.
T Consensus 160 ----p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-----------~~WRw-~~~~~~i~~~i~~vl~~~fY~PP~~~ 223 (599)
T PF06609_consen 160 ----PNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-----------SGWRW-IFYIFIIWSGIALVLIFFFYFPPPRA 223 (599)
T ss_pred ----ccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-----------CCcch-HHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 456676655554433333334566666544322 25764 444555555555543 3444333221
Q ss_pred C--cccccccch----h----------------------h-hhH---------------------HHHHH---HH---HH
Q 013318 226 G--EKETADASV----N----------------------F-YSY---------------------LVSLS---KS---IT 249 (445)
Q Consensus 226 ~--~~~~~~~~~----~----------------------~-~~~---------------------~~~~~---~~---~~ 249 (445)
+ .++.++++. + . ..+ .+|.+ ++ ..
T Consensus 224 ~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~ 303 (599)
T PF06609_consen 224 QLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPH 303 (599)
T ss_pred hhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCH
Confidence 1 111000000 0 0 000 01110 00 23
Q ss_pred Hhhccchh-HHHHHHHHHHHHHHHHHHhhhccc---cc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchH
Q 013318 250 TLLADVRM-LLIIPLFAYSGLQQAFVWAEFTKE---IV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIV 324 (445)
Q Consensus 250 ~~l~~~~~-~~l~~~~~~~g~~~~f~~~~~~~~---~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i 324 (445)
+++|++|- .......+..|....-....+|+. +. ++..+....+......+++..+|..+.|.+..++++-|..+
T Consensus 304 ~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~l 383 (599)
T PF06609_consen 304 RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQL 383 (599)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHH
Confidence 56777553 333333334443221111233332 11 12222235667777888888899998998888877666565
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHH
Q 013318 325 SGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF 403 (445)
Q Consensus 325 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~ 403 (445)
+.+.++..+.+.. +....++.. ...+...++-|++.+........+..-..|++ .+.+.|+...++.+|.++|.
T Consensus 384 i~~~~~~ta~~Ga-ma~~~~~n~----~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~ 458 (599)
T PF06609_consen 384 IFGSVLMTAFCGA-MAAVRPDNK----NAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGY 458 (599)
T ss_pred HHHHHHHHHHHHH-HHHccCCCc----chHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHH
Confidence 6666555443221 223333321 22344555666766666555555555556765 45577887788888777764
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=99.68 E-value=5.6e-14 Score=142.68 Aligned_cols=320 Identities=9% Similarity=-0.024 Sum_probs=175.0
Q ss_pred hccCCCCchHHHHHHHH----HHHHhhhhHHHHHHH----hCcch-hhhhhhHHHHHHHHH-hhhcc------hhhHHhH
Q 013318 54 VNTEGNLGTISLGILYT----SFTCFSLVASLVVRV----LGSKN-ALILGTTGYWLFVAA-NLFPS------WYTMVPA 117 (445)
Q Consensus 54 i~~~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr----~G~k~-~l~~g~~~~~~~~~~-~~~~~------~~~li~~ 117 (445)
..++.+++....+.+.. ..++..++.|.++|| +|||| .++.+....++.... +..|+ ...+++.
T Consensus 36 ~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~ 115 (444)
T PRK09669 36 YTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVT 115 (444)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHH
Confidence 34456777665555444 456788899999998 77755 455565555554433 33443 2233345
Q ss_pred HHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCc
Q 013318 118 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSG 197 (445)
Q Consensus 118 r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w 197 (445)
..+.+.+.+...+...+..++.++ +++||.+..++...+..+|..+++.+...+...... + ....+|
T Consensus 116 ~~l~~~~~t~~~ip~~al~~~~t~---------~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~-~---~~~~g~ 182 (444)
T PRK09669 116 YILLSLVYTAINVPYCAMPGAITN---------DPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK-G---DEQKGY 182 (444)
T ss_pred HHHHHHHHHhhcchHHHhHHHhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---chhhhH
Confidence 556666666666566677777763 457899988888888888887777654333221110 0 001245
Q ss_pred chhHHHHHHHHHHHHHHHHH-hccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 013318 198 TTLLFIVFLGVITLGTILMC-FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA 276 (445)
Q Consensus 198 ~~~~~~i~~~l~~~~~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~ 276 (445)
+ ..+.+++++..+..++.+ ..+|+++++ ++ + +.+.+ ++..+.+|||.++.+....+......... +
T Consensus 183 ~-~~~~i~~ii~~v~~~~~~~~~~e~~~~~-~~--~-----~~~~~---~~~~~~~~n~~~~~l~~~~~~~~~~~~~~-~ 249 (444)
T PRK09669 183 F-YAMMVMGLLGVVLFFCCFFMTKERYTPE-VD--N-----SSSVW---KDLKLLLGNSQWRIMFIFNVVLLTAVVTR-G 249 (444)
T ss_pred H-HHHHHHHHHHHHHHHHHhCCeEEecCCC-Cc--C-----CCCHH---HHHHHHhCCchHHHHHHHHHHHHHHHHHH-h
Confidence 4 234444444433333322 234332111 11 0 11122 23445678998876654433332222111 1
Q ss_pred hhcccccccccccc-hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHH
Q 013318 277 EFTKEIVTPALGVS-GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPL 355 (445)
Q Consensus 277 ~~~~~~~~~~~~~~-~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (445)
.+..++.+..++.. ..+.+.....+..+++.++++++.||+|+|+.. ..+.++..++... ....++++ ....+
T Consensus 250 ~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~-~~~~~~~~~~~~~-~~~~~~~~----~~~~~ 323 (444)
T PRK09669 250 GATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAF-KWTIVAFVILSAL-IFFIPPSN----VWLIF 323 (444)
T ss_pred hhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH-HHHHHHHHHHHHH-HHHhCcch----HHHHH
Confidence 12222222222222 233445556677788888999999999987743 4554443332221 11222221 23455
Q ss_pred HHHHHHhhhhhhhhhhhhHHHHhhccCC-------chh-hHHHHHHHHHHHHHHHHHh
Q 013318 356 IMAALLGIGDGVLNTQLSALLGILFKHD-------TEG-AFAQLKVWQCASIAVVFFI 405 (445)
Q Consensus 356 ~~~~l~G~~~~~~~~~~~~~l~~~~~~~-------~~~-a~~~~~~~~~~g~~ig~~i 405 (445)
+..+++|++.+...+..+++++|..+.+ ++. .+|.+++.+.+|.++|..+
T Consensus 324 ~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i 381 (444)
T PRK09669 324 ALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAV 381 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 6667899999999999999999987522 122 3677777776666655433
No 100
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.67 E-value=4.5e-14 Score=138.58 Aligned_cols=376 Identities=11% Similarity=0.090 Sum_probs=196.7
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhhh-ccCCCCchHHHHHHHHHHHH----hhhhHHHHHHHhCcchhhhhhhHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTV-NTEGNLGTISLGILYTSFTC----FSLVASLVVRVLGSKNALILGTTGY 99 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i-~~~~~~g~~~~~~~~~~~ai----~~l~~g~l~dr~G~k~~l~~g~~~~ 99 (445)
..+++.+.+++.++.+|..+....+..+.= .++.+++....+++++..++ .+++.|.+.||+|.||-+++.....
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l 83 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL 83 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence 345678888888888888877665554433 33468888888888776643 5667899999999888776554332
Q ss_pred HHH----HHHhhh----cch-hhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhh
Q 013318 100 WLF----VAANLF----PSW-YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ 170 (445)
Q Consensus 100 ~~~----~~~~~~----~~~-~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~ 170 (445)
.+. ..-.+. .|+ ...++..+..|+......+..=+|+.+++.+ .+ .|=-|.|.- .++|.
T Consensus 84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~----~~--feYG~~R~w------GSig~ 151 (412)
T PF01306_consen 84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRR----NG--FEYGRARMW------GSIGF 151 (412)
T ss_dssp HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHH----HS--S-HHHHHHH------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH----hc--CCcchHHHH------hhHHH
Confidence 221 111111 222 1222233333443333333333444444322 11 111233433 35777
Q ss_pred hhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccC--cccccccchhhhhHHHHHHHHH
Q 013318 171 FVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG--EKETADASVNFYSYLVSLSKSI 248 (445)
Q Consensus 171 ~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 248 (445)
+++..+++.+....+ ...+++..+..++..++.++.+++.+++ .+|..+ .++ .+...++.
T Consensus 152 ai~s~~~G~L~~i~p-------------~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~ 213 (412)
T PF01306_consen 152 AIASLLAGILFNINP-------------NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALG---AKK--DKVSLKDV 213 (412)
T ss_dssp HHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSS---S--------HHHH
T ss_pred HHHHHHhheeeeeCc-------------cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccc---cCC--CCCcHHHH
Confidence 777777766553221 2234443333333333333333221111 111111 011 11234567
Q ss_pred HHhhccchhHHHHHHHHHHH-HHHHHH---HhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchH
Q 013318 249 TTLLADVRMLLIIPLFAYSG-LQQAFV---WAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIV 324 (445)
Q Consensus 249 ~~~l~~~~~~~l~~~~~~~g-~~~~f~---~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i 324 (445)
.+++|+|++|.+..+..... ....|- ...+.....+.+.+.+..|+..+.--+.+++.-.+.+++.+|+|.|+.++
T Consensus 214 ~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Ll 293 (412)
T PF01306_consen 214 LSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLL 293 (412)
T ss_dssp HHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHH
Confidence 78999999987665333221 111221 12222233334455566788888888888888888999999999998665
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHH-HHHHHHHHHHHH
Q 013318 325 SGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQ-LKVWQCASIAVV 402 (445)
Q Consensus 325 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~-~~~~~~~g~~ig 402 (445)
+.+ ++..+=+. ...+.++ +..+...-.+-++-.........-++.+.+|++. ++.+.+ +++..++|..+.
T Consensus 294 lag-~i~~iRi~--~~~~~~~-----~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~ 365 (412)
T PF01306_consen 294 LAG-VIMAIRII--GSGFATN-----PWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIIL 365 (412)
T ss_dssp HHH-HHHHHHHH--HHHT--S-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHH
T ss_pred HHH-HHHHHHHH--HHhhhcc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 444 44444332 3345544 3456677788888888888888889999998774 345664 455556665544
Q ss_pred HHhhcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013318 403 FFIGPY----ISLQAMLIVMVVGICVALVGILFLTIQVEK 438 (445)
Q Consensus 403 ~~i~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 438 (445)
..+.+. .++...+.+++.+.+...+...+..++.+|
T Consensus 366 s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 366 SPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred hhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 333332 355555666666555555545555444333
No 101
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.66 E-value=2.5e-13 Score=135.12 Aligned_cols=346 Identities=17% Similarity=0.083 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHHHHH----HhhhhHHHHHHHhC-cchhhhhhhHHHHHHHHH
Q 013318 31 HILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFT----CFSLVASLVVRVLG-SKNALILGTTGYWLFVAA 105 (445)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~a----i~~l~~g~l~dr~G-~k~~l~~g~~~~~~~~~~ 105 (445)
..++.-+++.|..+....+..+...++.+.+....+++++... +++++.|.++||.+ +||.+.+..++-++....
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~ 84 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLL 84 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Confidence 4556666666777666666666666677788777777766544 45667889999986 567776665544443332
Q ss_pred -hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHH-HHHhhcC
Q 013318 106 -NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI-TLAVLKD 183 (445)
Q Consensus 106 -~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li-~~~l~~~ 183 (445)
...+++..++..-++..+...+..+-..++..++.. ++++.+|-.-...++|.+++.+. ...+...
T Consensus 85 ~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~------------~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~ 152 (400)
T PF03825_consen 85 LAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG------------DRGKDYGRIRLWGSIGFIVAALAFGGLLGGY 152 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc------------cccCCCCcchhhhhHHHHHHHHHHHHHHHhh
Confidence 234556555554455555555444444444444431 22222332222334555555432 1222111
Q ss_pred ccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHH
Q 013318 184 DKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL 263 (445)
Q Consensus 184 ~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 263 (445)
.+ .+.....+.+...+..+.....+.+|+.+++++++.+. + +...++..+++|+|+++.....
T Consensus 153 ~~---------~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~----~----~~~~~~~~~llk~~~~~~Fll~ 215 (400)
T PF03825_consen 153 LG---------ISGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKESV----K----KLLGLDALKLLKNPRFLVFLLA 215 (400)
T ss_pred hc---------cccccHHHHHHHHHHHHHHHHHHhCCCCccccccCCCc----c----cccchHHHHHhcCccHHHHHHH
Confidence 11 11111223333333322222234566543211111010 0 0111234578999998766555
Q ss_pred HHHHHHHHHHHHhhhcccccccc-cccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhc
Q 013318 264 FAYSGLQQAFVWAEFTKEIVTPA-LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINY 342 (445)
Q Consensus 264 ~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~ 342 (445)
.+..+...+.+.+..+.++.+.+ ...+.+|...++..+++++.-...+++.+|+|.++ ++.++.+..++=+. +..+
T Consensus 216 ~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~-ll~~a~~~~~vR~~--l~a~ 292 (400)
T PF03825_consen 216 AFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW-LLLLALVAYAVRWL--LYAY 292 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHH--HHHH
Confidence 55566554444344444443333 33456677777788888888889999999999886 45677666666543 2233
Q ss_pred cCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHHHHHH-HHHHHHHHHHhhcc
Q 013318 343 SVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVW-QCASIAVVFFIGPY 408 (445)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~-~~~g~~ig~~i~~~ 408 (445)
.+++........++...+.|+..+........++.+..|++.+ ++-++++.. ..+|..+|..++++
T Consensus 293 ~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 293 FSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred hcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3222110001112223568999888888888999999998854 577776654 35677666655543
No 102
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.66 E-value=1.7e-14 Score=139.17 Aligned_cols=269 Identities=12% Similarity=0.048 Sum_probs=167.2
Q ss_pred hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCcccc
Q 013318 108 FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVC 187 (445)
Q Consensus 108 ~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~ 187 (445)
..++..++++-++.|.|.+..-++.+.|+++.. +++++.+.+++.++++++|..+||+++..+......+
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~----------~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~ 76 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILG----------PIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGD 76 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHC----------CcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcc
Confidence 356788888999999999999999999999997 4668999999999999999999999988665322100
Q ss_pred cc-c---c-CCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHH-H
Q 013318 188 AA-L---L-GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI-I 261 (445)
Q Consensus 188 ~~-~---~-~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l-~ 261 (445)
.. + . ....+|+ ..|.+.+.+..+..+...+.+.|+.+++++ ++.+. ++.. +..+.+|+|++++. .
T Consensus 77 ~~~~~~~~~~~~~~~~-~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~-~~~~~-~~~~------~~~~~~~~~~~~l~~~ 147 (310)
T TIGR01272 77 LSMQVATANAEAAKVH-TPYLLLAGALAVLAIIFAFLPLPELQEADV-ARVSS-GDTT------QKTSAFQFTHLVLGAL 147 (310)
T ss_pred hhhhhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHccCCCCCcccc-ccccc-cccc------chhhHHhhHHHHHHHH
Confidence 00 0 0 0002343 455544444333333334554333222111 11000 0000 01134556666543 3
Q ss_pred HHHHHHHHHHHHHHhhhcccccc---cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHH
Q 013318 262 PLFAYSGLQQAFVWAEFTKEIVT---PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI 338 (445)
Q Consensus 262 ~~~~~~g~~~~f~~~~~~~~~~~---~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~ 338 (445)
..++|.|.+.+.. ++++.++.+ .+++.++.+...+.++.+.++|+++.+++.||+++|+. +..+.++..++.++
T Consensus 148 ~~f~yvg~e~~~~-~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~-l~~~~~l~~~~~~l- 224 (310)
T TIGR01272 148 GIFVYVGAEVSAG-SFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY-LAFNAFLAVLLSIG- 224 (310)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH-HHHHHHHHHHHHHH-
Confidence 4566777776543 445544432 25566678888999999999999999999999998774 45555554444321
Q ss_pred HhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhh
Q 013318 339 LINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
. ...+. .......++.|++.+...|...+...+..|++.+++.++.. ...+|.++++.+.
T Consensus 225 ~-~~~~~------~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~~-~~~~Gg~i~P~l~ 284 (310)
T TIGR01272 225 A-ALTHG------YVAMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGILC-LAIVGGAIVPLLQ 284 (310)
T ss_pred H-HHcCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHH-HHHhcchHHHHHH
Confidence 1 12222 12223555789999999999999888888877666656543 3446666655443
No 103
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.66 E-value=1.7e-13 Score=138.28 Aligned_cols=393 Identities=12% Similarity=0.060 Sum_probs=198.8
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHH----HHHHhhhhHHHHHH----HhCcchhhhhhhHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYT----SFTCFSLVASLVVR----VLGSKNALILGTTGY 99 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~----~~ai~~l~~g~l~d----r~G~k~~l~~g~~~~ 99 (445)
++++.++..++-+=.+|.......+.+.++.+.+....+.+.. ...+.+++.|+++| |+||||.++++....
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 3444554444444444444444444444445555544333332 44667889999999 599999998864433
Q ss_pred H-HHHHH-hhhcchh-----------------hHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccc--hhhhh
Q 013318 100 W-LFVAA-NLFPSWY-----------------TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGT--VIGSF 158 (445)
Q Consensus 100 ~-~~~~~-~~~~~~~-----------------~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~--~rg~~ 158 (445)
. +.... .+.++.. ..++.-.+..++.....+...++++|..| ++ +++++
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p----------~~~~~~~~a 153 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTG----------GDARRTRIA 153 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC----------chhHHHHHH
Confidence 2 22222 2333321 11111122333555555556677777764 33 34789
Q ss_pred hhHHHHHHHHhhhhhhHHHHHhhcC-------ccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCcccc
Q 013318 159 NGEFWGMFASHQFVGNLITLAVLKD-------DKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKET 230 (445)
Q Consensus 159 ~g~~~~~~~lg~~iG~li~~~l~~~-------~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~ 230 (445)
.++...+.++|.++|+.++...... ...|+.. -...+..|.+-+++.++..++. +++||++..++++.
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~ 229 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVS----CANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDF 229 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccc----cchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccc
Confidence 9998888899999999888754211 1111100 0112344555444444444444 45676432111110
Q ss_pred --cccchhhhhHHHHHHHHHHHhhcc--chhHHHHHHHHH--HHHHH-HHHHh-hhcccccc--cccc--cch---hH-H
Q 013318 231 --ADASVNFYSYLVSLSKSITTLLAD--VRMLLIIPLFAY--SGLQQ-AFVWA-EFTKEIVT--PALG--VSG---VG-G 294 (445)
Q Consensus 231 --~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~l~~~~~~--~g~~~-~f~~~-~~~~~~~~--~~~~--~~~---~g-~ 294 (445)
++.+..++.+.+..++++++.+|+ |.++.+....++ .|+.. .++.+ +..+.+.. ++-+ .++ .| +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~ 309 (477)
T TIGR01301 230 INSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAF 309 (477)
T ss_pred hhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHH
Confidence 000000000111222333333333 334444443333 33321 11112 22222211 0000 011 23 3
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHH-hhc-cCC--C---------Cccc-hhHHHHHHHH
Q 013318 295 AMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INY-SVT--S---------GVLG-TLYPLIMAAL 360 (445)
Q Consensus 295 ~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~-~~~-~~~--~---------~~~~-~~~~~~~~~l 360 (445)
.+..+++.+.+.+++..++.+|+|+|+.+-..+.++.++++...+ ... +++ + ...+ ....++...+
T Consensus 310 ~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (477)
T TIGR01301 310 GLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAI 389 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHH
Confidence 455677777788888899999998655454566555555543222 221 100 0 0000 1346677888
Q ss_pred HhhhhhhhhhhhhHHHHhhccCC-c--hhhHHHHHHHHHHHHHHHHH----hhcch--hHHHHHHHHHHHHHHHHHHHHH
Q 013318 361 LGIGDGVLNTQLSALLGILFKHD-T--EGAFAQLKVWQCASIAVVFF----IGPYI--SLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 361 ~G~~~~~~~~~~~~~l~~~~~~~-~--~~a~~~~~~~~~~g~~ig~~----i~~~~--~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
.|+..+..++..++++++..|++ + +...|++|..-.+...+.-+ +.+.. +..+.+.+-++..+++.+..++
T Consensus 390 ~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~ 469 (477)
T TIGR01301 390 LGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALI 469 (477)
T ss_pred hhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998843 2 34679999888776544332 22222 2344555555566666665554
Q ss_pred HHH
Q 013318 432 LTI 434 (445)
Q Consensus 432 ~~~ 434 (445)
+..
T Consensus 470 ~~~ 472 (477)
T TIGR01301 470 LLP 472 (477)
T ss_pred hCC
Confidence 443
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.65 E-value=1e-12 Score=133.44 Aligned_cols=365 Identities=14% Similarity=0.115 Sum_probs=201.5
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHH-HHHHh-h-hc-chhhHHhHHHHhhhhhHHhhhhhhhHHHHhh
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL-FVAAN-L-FP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~-~~~~~-~-~~-~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~ 140 (445)
.++-....++..++.|.++|+-|+||.++......+. .++.. + .| ++....+.-++.-++.+...+--++++.+.+
T Consensus 76 ~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la 155 (477)
T PF11700_consen 76 NSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc
Confidence 3444445677788899999999988887776654433 33333 2 23 3333333333333444444555577888877
Q ss_pred hhhhhccCCC----------------ccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHH
Q 013318 141 LSHASNHKLH----------------EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIV 204 (445)
Q Consensus 141 ~~~~~~~~~~----------------~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i 204 (445)
+++.+..+.. .+.+|++..|.-++...+|..+--++...+....+... .+..+-| ..+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~---~~~~~~r-~~~~~ 231 (477)
T PF11700_consen 156 RPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTA---SNTWAIR-VAFLI 231 (477)
T ss_pred CCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc---ccchhhh-HHHHH
Confidence 5432210000 00113888888777777777666655554443332100 0011112 12222
Q ss_pred HHHHHH-HHHHHHHhccCCcc-cCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHH-HHH-HHHHHHHH-Hhhhc
Q 013318 205 FLGVIT-LGTILMCFLRKEED-KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL-FAY-SGLQQAFV-WAEFT 279 (445)
Q Consensus 205 ~~~l~~-~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~-~~~-~g~~~~f~-~~~~~ 279 (445)
.++..+ .+....+++|++++ ++.++. +......+++..+..++..|+|.....+.. +++ -|+..... ...|.
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~~~~~~~---~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a 308 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGPRPLPSG---SSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYA 308 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcc---hhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222211 22223355666543 111111 101122333333333334445554433322 222 23332111 12222
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCc--cchHhHHHHHHHHHHHHHHhhccCCC-CccchhHHHH
Q 013318 280 KEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSI--TFIVSGGAIAQVVVFLWILINYSVTS-GVLGTLYPLI 356 (445)
Q Consensus 280 ~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~--~~~i~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 356 (445)
.. +-+++..+...+.....+.+++|++++|++.||+|.| + .+..+.++..+..++.++.+.++. ..-...-.++
T Consensus 309 ~~--~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~-~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~ 385 (477)
T PF11700_consen 309 TE--VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKR-TLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWV 385 (477)
T ss_pred HH--hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH-HHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHH
Confidence 21 1234455666677788899999999999999999987 5 344544443222122222111110 0001245788
Q ss_pred HHHHHhhhhhhhhhhhhHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHHHHHHHHH
Q 013318 357 MAALLGIGDGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGPY-----ISLQAMLIVMVVGICVALVGIL 430 (445)
Q Consensus 357 ~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~~~-----~~~~~~~~i~~~~~~~~~~~~~ 430 (445)
..+++|+..+..++..-++.+++.|++++. -||+|.+..-.++.+|+++-+. .+....+..+.++++++.+++.
T Consensus 386 ~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 386 LAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999998775 6899998887777777765432 3678888888999999999887
Q ss_pred HHHHHHHhh
Q 013318 431 FLTIQVEKA 439 (445)
Q Consensus 431 ~~~~~~~~~ 439 (445)
++..++.|+
T Consensus 466 ~v~~~~g~~ 474 (477)
T PF11700_consen 466 FVDVEKGRE 474 (477)
T ss_pred hccchhhhh
Confidence 776554443
No 105
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.64 E-value=4.9e-14 Score=146.12 Aligned_cols=316 Identities=11% Similarity=0.024 Sum_probs=181.3
Q ss_pred CCCchHHHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHH
Q 013318 58 GNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYL 136 (445)
Q Consensus 58 ~~~g~~~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i 136 (445)
........++++....+|+++.|+++||+|||++++++.++..++... .+++|+..+++.|++.|++.+........++
T Consensus 117 ~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 117 STLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 344455678888899999999999999999999999999988876665 4799999999999999999999999999999
Q ss_pred HHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH
Q 013318 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM 216 (445)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~ 216 (445)
+|+. ++++|+.+..+ ....-.++.+++....++.. +||. .+++......+.+++.
T Consensus 197 ~E~~----------~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-------------~Wr~-~~~~~~~~~~~~~~~~ 251 (521)
T KOG0255|consen 197 AEIV----------SPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-------------DWRW-LFWIISIPSGLFLLLW 251 (521)
T ss_pred eeec----------CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-------------hHHH-HHHHHHHHHHHHHHHH
Confidence 9997 57899999998 66666777777766665542 3764 3444343333333333
Q ss_pred HhccCCccc----Cccccc-c--cc--------hhhhhHHHHH--H-----------HHHHHhhccchhHHHHHHHHHHH
Q 013318 217 CFLRKEEDK----GEKETA-D--AS--------VNFYSYLVSL--S-----------KSITTLLADVRMLLIIPLFAYSG 268 (445)
Q Consensus 217 ~~l~~~~~~----~~~~~~-~--~~--------~~~~~~~~~~--~-----------~~~~~~l~~~~~~~l~~~~~~~g 268 (445)
++.+|.++- .+.++. + ++ .......... . .....+++.|++........+..
T Consensus 252 ~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 331 (521)
T KOG0255|consen 252 FLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIW 331 (521)
T ss_pred HccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHH
Confidence 334354331 111100 0 00 0000000000 0 01223445544333222222222
Q ss_pred HHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCc
Q 013318 269 LQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGV 348 (445)
Q Consensus 269 ~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~ 348 (445)
+.... .++...+...+++. .........+.....+....+...|+.|||... ..+..+..+++++ ..+.+....
T Consensus 332 ~~~~~--~y~gl~~~~~~lg~-~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~-~~~~~~~~~~~~~--~~~~~~~~~ 405 (521)
T KOG0255|consen 332 FVFSL--VYYGLSLNVSGLGG-NIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPL-FLSLFLAGIGLLL--FGWLPDDLG 405 (521)
T ss_pred HHHhH--HHHhhhhhhhhcCc-hHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHHH--HHHhhccch
Confidence 21111 12221121222332 223334445556666666778889999888643 4555554444332 233332210
Q ss_pred cchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhh
Q 013318 349 LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 349 ~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~ 406 (445)
..+..+...+-.++.+......+...+|++|+..+ .+.+..+....+|...++.+.
T Consensus 406 --~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 406 --GWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFP 462 (521)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01222222222223333333447888999998855 466777777777776665444
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.64 E-value=3.7e-13 Score=137.32 Aligned_cols=335 Identities=13% Similarity=0.073 Sum_probs=195.7
Q ss_pred hhhhhhccCCCCchHHHHH----HHHHHHHhhhhHHHHHHHhC-----cchhhhhhhHHHH-HHHHHh-hhcchhhHH-h
Q 013318 49 NLETTVNTEGNLGTISLGI----LYTSFTCFSLVASLVVRVLG-----SKNALILGTTGYW-LFVAAN-LFPSWYTMV-P 116 (445)
Q Consensus 49 ~~~~~i~~~~~~g~~~~~~----~~~~~ai~~l~~g~l~dr~G-----~k~~l~~g~~~~~-~~~~~~-~~~~~~~li-~ 116 (445)
.+.+.+.++.+++....+. ....+++ .++.|+++||++ ||+.++++.++.+ +..... ..++..... .
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~ 125 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAA 125 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 4455556566777765533 3333444 445999999998 7778888876552 221111 224433333 4
Q ss_pred HHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCC
Q 013318 117 ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTS 196 (445)
Q Consensus 117 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~ 196 (445)
..++.+++.+...++.-.+..|..++ +++.++...+..|.....|..+|+.+++.+... .+
T Consensus 126 ~~~l~~~~~a~~dv~~da~~~e~~~~--------~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~-----------~~ 186 (468)
T TIGR00788 126 FIFLAALAKALYDVLVDSLYSERIRE--------SPSAGPSLVSWMWGASATGGLISSLLGGPLLDK-----------TL 186 (468)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhhhc--------CCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh-----------cC
Confidence 78899999999999988888888741 233445556667777778999999888776533 25
Q ss_pred cchhHHHHHHHHHHHHHHHHHhccCCcc--cCcccccc------cchhhhhHHHHHHHHHHHhhccchhHHHHH-HHH-H
Q 013318 197 GTTLLFIVFLGVITLGTILMCFLRKEED--KGEKETAD------ASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFA-Y 266 (445)
Q Consensus 197 w~~~~~~i~~~l~~~~~~l~~~l~~~~~--~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~-~~~-~ 266 (445)
|+. .|.+.+++.++..+..++++|++. .++.+..+ ...+.....++..++.++.+++|+++.... .++ +
T Consensus 187 ~~~-~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~ 265 (468)
T TIGR00788 187 TRI-LFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSY 265 (468)
T ss_pred cch-HHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 654 444555555544444466777531 11110000 000011122344556667788888765332 222 1
Q ss_pred HHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHh---hcc
Q 013318 267 SGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI---NYS 343 (445)
Q Consensus 267 ~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~---~~~ 343 (445)
.... +...+.|.......+.+.+.+|.+....+++.+++....+++.+|++.|+ ++..+.++..++...... .|.
T Consensus 266 ~~~~-~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~-~l~~~~~l~~~~~~~~~~l~~~~~ 343 (468)
T TIGR00788 266 ANLP-GASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRL-LFGVTTLLYTLSSLFDLILVKRWN 343 (468)
T ss_pred hhcC-CCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHH-HHHHHHHHHHHHHhCceeeeeccc
Confidence 1110 11111111111123566778999999999999999999999999999876 445666655544321000 111
Q ss_pred CCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhh
Q 013318 344 VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
......+....+...++.+++.+........++.+..|++. ++.+|+++..+++|..++..++
T Consensus 344 ~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~g 407 (468)
T TIGR00788 344 LAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLG 407 (468)
T ss_pred cccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHH
Confidence 00000001123445566777777777777889999998875 4578988888888887766544
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.64 E-value=5.6e-13 Score=136.48 Aligned_cols=323 Identities=12% Similarity=0.080 Sum_probs=170.3
Q ss_pred cCCCCchHHHHHHHH----HHHHhhhhHHHHHH----HhCcch-hhhhhhHHHHHHHHHh-hhcc------hhhHHhHHH
Q 013318 56 TEGNLGTISLGILYT----SFTCFSLVASLVVR----VLGSKN-ALILGTTGYWLFVAAN-LFPS------WYTMVPASL 119 (445)
Q Consensus 56 ~~~~~g~~~~~~~~~----~~ai~~l~~g~l~d----r~G~k~-~l~~g~~~~~~~~~~~-~~~~------~~~li~~r~ 119 (445)
+..+++....+.+.. .-++..++.|.++| |+|||| -+++|....++..... ..|+ +.-+++..+
T Consensus 35 ~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~ 114 (473)
T PRK10429 35 DVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYI 114 (473)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHH
Confidence 335666655555444 34677888999999 569855 5555665555544433 2232 112334556
Q ss_pred HhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcch
Q 013318 120 YLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTT 199 (445)
Q Consensus 120 l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~ 199 (445)
+.+++.+...+...+..++.++ +++||.+..++-..+.++|..+++.+...+....+. .....+|+
T Consensus 115 l~~~~~t~~~ip~~al~~~lt~---------~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~----~~~~~g~~- 180 (473)
T PRK10429 115 LWGMTYTIMDIPFWSLVPTLTL---------DKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGG----GDRGFGFQ- 180 (473)
T ss_pred HHHHHHHHHcchHHhhhHHhCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CchhhhHH-
Confidence 6677777777777777777763 467899988876666667665555443322111110 00011232
Q ss_pred hHHHHHHHHHHHHHHHHH-hccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhh
Q 013318 200 LLFIVFLGVITLGTILMC-FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEF 278 (445)
Q Consensus 200 ~~~~i~~~l~~~~~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~ 278 (445)
....+.+++..+..+..+ ..||+.+.++++.++ +++.+.++.+ ..++|||.++.++...+......... ..+
T Consensus 181 ~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~~~~~~~~---~~~~~n~~~~~ll~~~~~~~~~~~~~-~~~ 253 (473)
T PRK10429 181 MFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAE---GSHLTLKDIV---ALIYKNDQLSCLLGMALAYNIASNII-NGF 253 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCceecCCcccccccc---ccCCCHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHH-hhh
Confidence 222333333333332222 244432111111000 0112233322 23457887766554433333322222 122
Q ss_pred cccccccccc-cchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHh-hccCCCCccchhHHHH
Q 013318 279 TKEIVTPALG-VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLI 356 (445)
Q Consensus 279 ~~~~~~~~~~-~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 356 (445)
..++.....+ .+..+.+....+++.+++.++.+++.||+|+|+.+ ..+.++..++.+..+. .+.+... ....++
T Consensus 254 ~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i 329 (473)
T PRK10429 254 AIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW-AGASIFPVLSCGVLLLMGLAAPHN---ALLIVI 329 (473)
T ss_pred eeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH-HHHHHHHHHHHHHHHHHhccCchh---HHHHHH
Confidence 2222211122 23455666677788899999999999999988754 4555443333221111 1121211 234555
Q ss_pred HHHHHhhhhhhhhhhhhHHHHhhccCC-----c--hh-hHHHHHHHHHHHHHHHH
Q 013318 357 MAALLGIGDGVLNTQLSALLGILFKHD-----T--EG-AFAQLKVWQCASIAVVF 403 (445)
Q Consensus 357 ~~~l~G~~~~~~~~~~~~~l~~~~~~~-----~--~~-a~~~~~~~~~~g~~ig~ 403 (445)
..++.|++.+..++..+++++|..+.+ + ++ .+|...+.+-+|.+++.
T Consensus 330 ~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 330 AGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 667788888888888899999986522 2 22 46777777766665543
No 108
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.63 E-value=7.5e-20 Score=185.98 Aligned_cols=341 Identities=15% Similarity=0.122 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhc---chhhHHhHHHHhhhhhHHhhhhhhhHHHHh
Q 013318 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP---SWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (445)
Q Consensus 64 ~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~---~~~~li~~r~l~Gig~g~~~~~~~~~i~~~ 139 (445)
..+..+....++++++|.+.||+|||+++.++..+..+..+.. +.+ ++..+.++|+++|+|.|...+....|+.|.
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~ 130 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEI 130 (451)
T ss_pred HHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3455666777899999999999999999999998877766654 566 899999999999999999999999999999
Q ss_pred hhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhc
Q 013318 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFL 219 (445)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l 219 (445)
. |+++||+..++.+....+|..++..++....... +.++||. .+..-.+..++..+...++
T Consensus 131 ~----------~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~--------~~~~Wr~-~~~~~~~~~l~~~~~~~~~ 191 (451)
T PF00083_consen 131 A----------PPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS--------DNWGWRI-LLIFGAIPSLLVLLLRFFL 191 (451)
T ss_pred c----------cccccccccccccccccccccccccccccccccc--------ccccccc-ccccccccccccccccccc
Confidence 8 5788999999988888888887777765542221 1245874 2222222222223333567
Q ss_pred cCCcc----cCccccccc---c-------hhhhhHHHHHH-------HHHHHhhccch----hHHHHHHHHHHHHHHHHH
Q 013318 220 RKEED----KGEKETADA---S-------VNFYSYLVSLS-------KSITTLLADVR----MLLIIPLFAYSGLQQAFV 274 (445)
Q Consensus 220 ~~~~~----~~~~~~~~~---~-------~~~~~~~~~~~-------~~~~~~l~~~~----~~~l~~~~~~~g~~~~f~ 274 (445)
||+++ +.++|+.++ + ..+..+.+++. ....+++++++ ......+.....+.....
T Consensus 192 pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~ 271 (451)
T PF00083_consen 192 PESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINF 271 (451)
T ss_pred ccccceecccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccc
Confidence 77543 111110000 0 00000000000 01223344432 222211122222211112
Q ss_pred Hhhhccccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHH--hhccCCCC-ccc
Q 013318 275 WAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL--INYSVTSG-VLG 350 (445)
Q Consensus 275 ~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~--~~~~~~~~-~~~ 350 (445)
...+.+.+. ..+.+.. -......++...++.++...+.||+|||+.. +.+.....++.+... .....+.+ ...
T Consensus 272 ~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 272 IFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLL-IIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred ccccccccccccccccc--ccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc
Confidence 223333221 1222222 1223345566667777778999999999744 455555444332111 11111111 000
Q ss_pred hhHHHHHHHHHhh-hhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHHH
Q 013318 351 TLYPLIMAALLGI-GDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICV 424 (445)
Q Consensus 351 ~~~~~~~~~l~G~-~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~~~----~~~~~~~i~~~~~~~ 424 (445)
....+...++.. ....+.+..+.+.+|++|.+.+ .+.++......++..++..+.+.. +....+.+.++++++
T Consensus 349 -~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 349 -ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred -cccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 111122222222 2224556667888999998754 466666565556666555444432 223445555555555
Q ss_pred HHH
Q 013318 425 ALV 427 (445)
Q Consensus 425 ~~~ 427 (445)
+.+
T Consensus 428 ~~i 430 (451)
T PF00083_consen 428 AII 430 (451)
T ss_pred HHh
Confidence 544
No 109
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.59 E-value=3e-15 Score=144.63 Aligned_cols=107 Identities=16% Similarity=0.098 Sum_probs=86.0
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hh-----c--chhhHHhHHHHhhhhhHHhhhhhhhHH
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF-----P--SWYTMVPASLYLGFAASIIWVGEGTYL 136 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~-----~--~~~~li~~r~l~Gig~g~~~~~~~~~i 136 (445)
.++-+....++|++.|++.||+|||++....+++..+.++.+ +. + -...+...|+++|+|.|+-+|...++.
T Consensus 90 n~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~ 169 (538)
T KOG0252|consen 90 NAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIM 169 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHh
Confidence 344455667899999999999999999999998877766543 21 1 145677899999999999999999999
Q ss_pred HHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
+|.++ +++||...+..++....|...|..++..+.
T Consensus 170 SE~an----------~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252|consen 170 SESAN----------KKTRGAFIAAVFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred hhhhh----------hccccceeEEEEEecchhHhhccHHHHHHH
Confidence 98884 578999999999888888888887765443
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.59 E-value=1.3e-12 Score=132.86 Aligned_cols=311 Identities=14% Similarity=0.031 Sum_probs=161.4
Q ss_pred hhccCCCCchHHHHHHHH----HHHHhhhhHHHHHHHh----Ccchhh-hhhhHHHHHHHH-Hhhhc-----c--hhhHH
Q 013318 53 TVNTEGNLGTISLGILYT----SFTCFSLVASLVVRVL----GSKNAL-ILGTTGYWLFVA-ANLFP-----S--WYTMV 115 (445)
Q Consensus 53 ~i~~~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr~----G~k~~l-~~g~~~~~~~~~-~~~~~-----~--~~~li 115 (445)
.+.+..+++....+.+.. ..++..++.|+++||. ||||.. .++.+...+... .+..+ + ..-.+
T Consensus 34 y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (448)
T PRK09848 34 YYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAY 113 (448)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHH
Confidence 333445666655555443 4567888999999996 666644 555543333222 22111 1 11123
Q ss_pred hHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHH-----HHhhhhhhHHHHHhhcCccccccc
Q 013318 116 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMF-----ASHQFVGNLITLAVLKDDKVCAAL 190 (445)
Q Consensus 116 ~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~-----~lg~~iG~li~~~l~~~~~~~~~~ 190 (445)
..-.+.+++.+...+...+...+... +++||.+..++-.... .++..+||++.........
T Consensus 114 ~~~~~~~~~~~~~~~~~~al~~~~~~---------~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~----- 179 (448)
T PRK09848 114 LTYMGLGLCYSLVNIPYGSLATAMTQ---------QPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMV----- 179 (448)
T ss_pred HHHHHHHHHHHHhcccHhhhhhhhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh-----
Confidence 34567788888877766666555542 3567887766543322 2344445554432211000
Q ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHH----hccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHH
Q 013318 191 LGGSTSGTTLLFIVFLGVITLGTILMC----FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY 266 (445)
Q Consensus 191 ~~~~~~w~~~~~~i~~~l~~~~~~l~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 266 (445)
.+|. ....++.+++.++.+ ..||+.+ +++ + +.+.++ ...+++|||+++......+.
T Consensus 180 ----~~~~----~~~~~~~v~~~~~~~~~~~~~~e~~~--~~~--~-----~~~~~~---~~~~l~~n~~f~~~~~~~~~ 239 (448)
T PRK09848 180 ----SVYH----FWTIVLAIAGMVLYFICFKSTRENVV--RIV--A-----QPSLKI---SLQTLKRNRPLFMLCIGALC 239 (448)
T ss_pred ----hhHH----HHHHHHHHHHHHHHHHHHcCcEeccC--CCc--c-----CCCHHH---HHHHHhCCchHHHHHHHHHH
Confidence 0111 111222223332221 1233211 111 0 111222 24457889998765544333
Q ss_pred HHHHHHHHHhhhcccccccccccc-hh-HHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccC
Q 013318 267 SGLQQAFVWAEFTKEIVTPALGVS-GV-GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV 344 (445)
Q Consensus 267 ~g~~~~f~~~~~~~~~~~~~~~~~-~~-g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~ 344 (445)
............+ ++....++.+ .. ++......++.+++.++.+++.||+++|+. +..|.++..++.+. +.+.+
T Consensus 240 ~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~-~~~g~~~~~i~~~~--~~~~~ 315 (448)
T PRK09848 240 VLISTFAVSASSL-FYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNT-FLIGALLGTCGYLL--FFWVS 315 (448)
T ss_pred HHHHHHHHhhhhe-eeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHH--HHHcC
Confidence 2222111111222 2222223332 23 333344456778889999999999998874 45676665555432 22332
Q ss_pred CCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc--------hhhHHHHHHHHHHHHHHHHH
Q 013318 345 TSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT--------EGAFAQLKVWQCASIAVVFF 404 (445)
Q Consensus 345 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~--------~~a~~~~~~~~~~g~~ig~~ 404 (445)
+.+ ....++..++.|+|.+...+..+++.+|..|+++ +..+|.+++.+.+|.++|..
T Consensus 316 ~~~---~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 316 VWS---LPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred chh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 222 2334455667899999888888999988876431 33567888888887766543
No 111
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.57 E-value=1.4e-12 Score=126.34 Aligned_cols=305 Identities=14% Similarity=0.024 Sum_probs=165.1
Q ss_pred HHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh---hhc----chh--hHHhHHHHhhhhhHHhhhhhhhHHHHhhh
Q 013318 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN---LFP----SWY--TMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (445)
Q Consensus 71 ~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~---~~~----~~~--~li~~r~l~Gig~g~~~~~~~~~i~~~~~ 141 (445)
......+.+-|+.||+|-|..+.++...-++....- ..| .+. ....+..+.+.++-.+......+...|+
T Consensus 91 v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF- 169 (480)
T KOG2563|consen 91 VSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWF- 169 (480)
T ss_pred HHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhC-
Confidence 344456677799999999999999998777665542 122 222 3334445555444433333233344444
Q ss_pred hhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchh-HHHHHHHHHHHHHHHHHhcc
Q 013318 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTL-LFIVFLGVITLGTILMCFLR 220 (445)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~-~~~i~~~l~~~~~~l~~~l~ 220 (445)
++++|..+..+-.....+|.++|.++...+..+..+ ....+|... ++....++..+.+++..+.+
T Consensus 170 ---------~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~-----~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~ 235 (480)
T KOG2563|consen 170 ---------PPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKD-----SEDNSWLFFTLFLGVECLAALLLALVLFVF 235 (480)
T ss_pred ---------CcchhhhhhhHHHhcchHHHHHHhhccceecCCCCC-----cchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 688999998887777789999999888777655421 122455431 23333333433333333333
Q ss_pred C--CcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH--HhhhcccccccccccchhHHHH
Q 013318 221 K--EEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFV--WAEFTKEIVTPALGVSGVGGAM 296 (445)
Q Consensus 221 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~--~~~~~~~~~~~~~~~~~~g~~~ 296 (445)
+ |+.++... . ......+ -.+.+.+.+||+++..+.+.+- .|+. .|+ .+.+...+...+++....|++.
T Consensus 236 ~~~P~tPps~s--~-~~~~~~~---f~~si~~~~~n~~F~il~~~yg-i~~g-~F~~l~~~l~~~l~~sgY~~~~aG~ig 307 (480)
T KOG2563|consen 236 TKKPPTPPSAS--Q-AALQDAS---FPKSIKSCFKNRQFIILAICYG-IGLG-LFNSLSTLLNLALCPSGYEGVFAGYIG 307 (480)
T ss_pred CCCCCCCCchh--H-hhhhcCc---HHHHHHHHHcCccHHHHHHHHh-hhHH-HHHHHHHHhhhccccccCCccccchhH
Confidence 2 22212111 0 0000111 2346778899999987764321 1111 122 1111111212333334677888
Q ss_pred HHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHH
Q 013318 297 AVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL 376 (445)
Q Consensus 297 ~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l 376 (445)
...-++.++++...|.+.||.+.-+...........++-. .+......... ..+++....++|++.....|.-..+-
T Consensus 308 ~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~-~l~~~t~~~~~--~viv~~t~~~~g~~~~~~~Pig~Elg 384 (480)
T KOG2563|consen 308 ALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTL-MLLTCTLFLGD--SVIVFTTCGLLGFFGTGYLPIGFELG 384 (480)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH-HHHHhhccCCc--eEehhhhHHHHHHhhcCCCCcceeee
Confidence 8888889999999999999975433222232233222211 11111211111 24567777788888877777766665
Q ss_pred Hhh-ccCCchhhHHHHH-HHHHHHHHH
Q 013318 377 GIL-FKHDTEGAFAQLK-VWQCASIAV 401 (445)
Q Consensus 377 ~~~-~~~~~~~a~~~~~-~~~~~g~~i 401 (445)
.|. ||...++..|+.+ +.|..+...
T Consensus 385 vE~TyPv~E~tSsGll~~~gq~f~~~~ 411 (480)
T KOG2563|consen 385 VETTYPVAEGTSSGLLNLSGQIFGVIL 411 (480)
T ss_pred eeeccccCCcccceeEEeehhHHHHHH
Confidence 555 5655555556433 333444433
No 112
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.54 E-value=5.9e-11 Score=120.50 Aligned_cols=357 Identities=8% Similarity=-0.019 Sum_probs=188.0
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhhhhhc-cCCCCchHHHHHHH----HHHHHhhhhHHHHHHHh-CcchhhhhhhHHH
Q 013318 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVN-TEGNLGTISLGILY----TSFTCFSLVASLVVRVL-GSKNALILGTTGY 99 (445)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~-~~~~~g~~~~~~~~----~~~ai~~l~~g~l~dr~-G~k~~l~~g~~~~ 99 (445)
.++.++.+....+....+++....+.+... ++.+++....+..+ ....++++++|+++||+ ||||++++|.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 455566666666666666666665555443 33455554433333 34456778999999999 9999999999877
Q ss_pred HHHHHHh-hhc-chhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHH
Q 013318 100 WLFVAAN-LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (445)
Q Consensus 100 ~~~~~~~-~~~-~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~ 177 (445)
.+..... ..+ +...++..-.+.++|.|...+...+++++..|+ ++++|...+++++...++|..+||.+.
T Consensus 87 ~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~--------~~~~R~sgf~i~Y~~~nlG~~iap~l~ 158 (493)
T PRK15462 87 AIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEP--------TDPRRDGGFSLMYAAGNVGSIIAPIAC 158 (493)
T ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCC--------CCccccceehHHHHHHHHHHHHHHHHH
Confidence 6654332 212 212233333455566777667677888888742 234799999999999999999999998
Q ss_pred HHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCC-ccc---Ccccccccchhh----------------
Q 013318 178 LAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKE-EDK---GEKETADASVNF---------------- 237 (445)
Q Consensus 178 ~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~-~~~---~~~~~~~~~~~~---------------- 237 (445)
..+... .||+. .|.+.++.++++.+..++.++. ++. ++++.++++...
T Consensus 159 g~L~~~-----------~Gw~~-~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (493)
T PRK15462 159 GYAQEE-----------YSWAM-GFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPAL 226 (493)
T ss_pred HHHHhh-----------hChHH-HHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence 877533 35654 3444333334444433332211 110 000000000000
Q ss_pred -hhHHHHHHHH----------------HH-Hhh--cc-chhHHHHHHHH-----HHHHHHHHH-Hhhhcccccccc-ccc
Q 013318 238 -YSYLVSLSKS----------------IT-TLL--AD-VRMLLIIPLFA-----YSGLQQAFV-WAEFTKEIVTPA-LGV 289 (445)
Q Consensus 238 -~~~~~~~~~~----------------~~-~~l--~~-~~~~~l~~~~~-----~~g~~~~f~-~~~~~~~~~~~~-~~~ 289 (445)
.....+.... .. +.. .+ +|+....++++ +..+++..- .+.|.....++. .|.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~ 306 (493)
T PRK15462 227 ITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGY 306 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcce
Confidence 0000000000 00 001 01 24433333322 222333211 123332222222 122
Q ss_pred c-hhHHHHHHHHHHHHHHHhhhhccccCCCC--c---cc-hHhHHHHHHHHHHHHHHh--hccCCCCccchhHHHHHHHH
Q 013318 290 S-GVGGAMAVYGAFDAICSLAAGRLTTGLPS--I---TF-IVSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAAL 360 (445)
Q Consensus 290 ~-~~g~~~~~~~i~~~~g~~~~G~l~d~~g~--~---~~-~i~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l 360 (445)
+ ......+...+..++.+++..++-.|..+ | .+ -...|+++..++++.... ...++.....+..+....++
T Consensus 307 ~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~ 386 (493)
T PRK15462 307 TVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAV 386 (493)
T ss_pred eeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 2 24455677777778777776655333311 1 01 135677666666532211 11111111113346677888
Q ss_pred HhhhhhhhhhhhhHHHHhhccCCch-hhHHHHHHH-HHHHHHHH
Q 013318 361 LGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVW-QCASIAVV 402 (445)
Q Consensus 361 ~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~-~~~g~~ig 402 (445)
+++|+-+..|.-.+.++++.|++.+ ..+|.+.+. ..+|..++
T Consensus 387 ~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~ 430 (493)
T PRK15462 387 MGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLA 430 (493)
T ss_pred HHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998754 467876442 24554443
No 113
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.54 E-value=7.8e-13 Score=133.66 Aligned_cols=314 Identities=13% Similarity=0.083 Sum_probs=182.3
Q ss_pred cCCCCchHHHHHHHH----HHHHhhhhHHHHHH----HhCcchhhh-hhhHHHHHHHHHhh-h-c-ch------hhHHhH
Q 013318 56 TEGNLGTISLGILYT----SFTCFSLVASLVVR----VLGSKNALI-LGTTGYWLFVAANL-F-P-SW------YTMVPA 117 (445)
Q Consensus 56 ~~~~~g~~~~~~~~~----~~ai~~l~~g~l~d----r~G~k~~l~-~g~~~~~~~~~~~~-~-~-~~------~~li~~ 117 (445)
+..+++....+.+.. ..++..++.|.++| |+||||..+ +|....++.....+ . | ++ .-+.+.
T Consensus 30 ~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~ 109 (428)
T PF13347_consen 30 DVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVF 109 (428)
T ss_pred HHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHH
Confidence 335666665555544 34667788999999 899777665 45555555444433 3 3 11 113445
Q ss_pred HHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCC-CC
Q 013318 118 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGS-TS 196 (445)
Q Consensus 118 r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~-~~ 196 (445)
-++..++.........++..+.++ +++||.+..+.-..+..+|..+.+.+...+....+. ... .+
T Consensus 110 ~~l~~~~~t~~~i~~~al~~~lt~---------~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~-----~~~~~~ 175 (428)
T PF13347_consen 110 YILFDIAYTFVQIPYNALIPELTP---------DPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGG-----GDTSNG 175 (428)
T ss_pred HHHHHHhhhhccCchhhcCccccc---------cHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-----CccchH
Confidence 566677777777777777777764 357899998887777777775555444443322221 001 14
Q ss_pred cchhHHHHHHHHHHHHHHHH-HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 013318 197 GTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW 275 (445)
Q Consensus 197 w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~ 275 (445)
|+. ...+.+++..+..++. +.+||++++.+++ + ++.+.++ ..++.+|||+++.+....++..+......
T Consensus 176 ~~~-~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~--~----~~~~~~~---~~~~~~~nr~~~~l~~~~~~~~~~~~~~~ 245 (428)
T PF13347_consen 176 YRW-MALVLAIVGLVFFLITFFFVKERSVEVTEQ--E----KKISLRD---SLRSLFRNRPFRILLLAFFLQWLAFALMN 245 (428)
T ss_pred HHH-HHHHHHHHHHHHhhhhhheeeecccccccc--c----ccccccc---chhhhcccchHHHHHHHHHHHHhhhhhhh
Confidence 543 3334444444444333 3455511111111 0 1112222 23456778888766555554433322221
Q ss_pred ---hhhccccccccccc-chhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccch
Q 013318 276 ---AEFTKEIVTPALGV-SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT 351 (445)
Q Consensus 276 ---~~~~~~~~~~~~~~-~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (445)
.+|.++. ++. +..+.......++.+++.+++++++||+|+|+. ...+.++.+++.++. .+.+..+ .
T Consensus 246 ~~~~y~~~~v----l~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~-~~~~~~~~~~~~~~~--~~~~~~~---~ 315 (428)
T PF13347_consen 246 TFLPYYFTYV----LGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV-YIIGLLLAALGFLLL--FFLGPGS---P 315 (428)
T ss_pred hHHHHHHHHH----hcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceee-hhhhHHHHHHHHHHH--HHHHhhh---H
Confidence 2222222 222 345666677888899999999999999999884 456666665554321 2222111 2
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-------hh-hHHHHHHHHHHHHHHHH
Q 013318 352 LYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-------EG-AFAQLKVWQCASIAVVF 403 (445)
Q Consensus 352 ~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-------~~-a~~~~~~~~~~g~~ig~ 403 (445)
...++..++.|++.+..+...+++++|..++++ ++ .+|++++.+-++.+++.
T Consensus 316 ~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~ 375 (428)
T PF13347_consen 316 WLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAG 375 (428)
T ss_pred HHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHH
Confidence 567788888999999999999999999886431 12 46777777766655543
No 114
>PRK11462 putative transporter; Provisional
Probab=99.51 E-value=5.2e-11 Score=121.39 Aligned_cols=309 Identities=10% Similarity=0.027 Sum_probs=162.2
Q ss_pred CCCCchHHHHHHHH----HHHHhhhhHHHHHHH----hCcchhhh-hhhHHHHHHHHHh-hhcc------hhhHHhHHHH
Q 013318 57 EGNLGTISLGILYT----SFTCFSLVASLVVRV----LGSKNALI-LGTTGYWLFVAAN-LFPS------WYTMVPASLY 120 (445)
Q Consensus 57 ~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr----~G~k~~l~-~g~~~~~~~~~~~-~~~~------~~~li~~r~l 120 (445)
..+++....+.++. .-++..++.|.++|| +||||..+ +|....++..... ..|+ ..-+.+...+
T Consensus 39 ~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~ 118 (460)
T PRK11462 39 IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTL 118 (460)
T ss_pred hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHH
Confidence 34666555454444 447888999999996 68876655 4555555544443 3342 1123344556
Q ss_pred hhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchh
Q 013318 121 LGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTL 200 (445)
Q Consensus 121 ~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~ 200 (445)
..++.......-.+..++.++ +++||.+..++...+..+|..+++.+...+....+. + ....+|+.
T Consensus 119 ~~~~~t~~~ipy~al~~~lt~---------d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~-~---~~~~g~~~- 184 (460)
T PRK11462 119 LTLLYTVVNIPYCALGGVITN---------DPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG-D---NKPLGFQG- 184 (460)
T ss_pred HHHHHHHHhccHHHHHHHhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---chhhhHHH-
Confidence 677777777777777777764 478999999998888888877776664433322110 0 00123432
Q ss_pred HHHHHHHHHHHHHHHHHh-ccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH---HHh
Q 013318 201 LFIVFLGVITLGTILMCF-LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF---VWA 276 (445)
Q Consensus 201 ~~~i~~~l~~~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f---~~~ 276 (445)
...+++++.++...+.++ .+|+++.+ ++ +.+.++ .....+|||.++.+....+........ ...
T Consensus 185 ~~~i~~ii~~i~~~i~~~~~kE~~~~~-~~--------~~~~~~---~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~ 252 (460)
T PRK11462 185 GIAVLSVVAFMMLAFCFFTTKERVEAP-PT--------TTSMRE---DLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMM 252 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcceeccCCC-cc--------CCCHHH---HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 233333333333322222 23322111 10 111232 233457787776554332222221111 112
Q ss_pred hhccccccccccc-chhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHH
Q 013318 277 EFTKEIVTPALGV-SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPL 355 (445)
Q Consensus 277 ~~~~~~~~~~~~~-~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (445)
.|.+++ ++. +..+.++..++++.+++.++.+++.||+++|+.. ..+..+..+.... +...++.+ ....+
T Consensus 253 y~~~y~----~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~-~~~~~~~~~~~~~-~~~~~~~~----~~~~~ 322 (460)
T PRK11462 253 YYVTWI----LGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF-WWTNALLAVISLA-MFFVPMQA----SITMF 322 (460)
T ss_pred hhhhhh----cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH-HHHHHHHHHHHHH-HHHhchhH----HHHHH
Confidence 333333 222 2334556678888999999999999999887643 3232222221111 11222211 12234
Q ss_pred HHHHHHhhhhhhhhhhhhHHHHhhccCC------c-hh-hHHHHHHHHHHHHHH
Q 013318 356 IMAALLGIGDGVLNTQLSALLGILFKHD------T-EG-AFAQLKVWQCASIAV 401 (445)
Q Consensus 356 ~~~~l~G~~~~~~~~~~~~~l~~~~~~~------~-~~-a~~~~~~~~~~g~~i 401 (445)
+..++.|++.+...+..+++++|..+.+ + +. .++...+.+-+|.++
T Consensus 323 ~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~al 376 (460)
T PRK11462 323 VFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAF 376 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHH
Confidence 4455677777777777788888876521 2 22 255555555555444
No 115
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.40 E-value=1.4e-10 Score=112.12 Aligned_cols=339 Identities=13% Similarity=0.097 Sum_probs=193.4
Q ss_pred HHHHhhhhHHHHHHHhCcchhhhhhhHHHHH-HHHHh-h-hc--chhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhh
Q 013318 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWL-FVAAN-L-FP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (445)
Q Consensus 71 ~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~-~~~~~-~-~~--~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~ 145 (445)
..++-.++.|.++|..|+||-.+--.....+ .++.. + .+ ++...++.-++..++.....+-.++++.+..+
T Consensus 70 lia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~---- 145 (438)
T COG2270 70 LIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTT---- 145 (438)
T ss_pred HHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcC----
Confidence 4566778899999999988876555444333 33332 2 33 45555666777888887777777888888874
Q ss_pred ccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCcccccccc--------CCCCCcchhHHHHHHHHHHHH-HHHH
Q 013318 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALL--------GGSTSGTTLLFIVFLGVITLG-TILM 216 (445)
Q Consensus 146 ~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~--------~~~~~w~~~~~~i~~~l~~~~-~~l~ 216 (445)
+++.++..++-|..-.+|.++--.+........++.+.+. ++.. - +..+.+.++..++. +.+.
T Consensus 146 ------k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~-ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 146 ------KDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGED-V-RITGLLAALWWLLFALPMI 217 (438)
T ss_pred ------ccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccccc-c-hhHHHHHHHHHHHHHhHHH
Confidence 4566666666666555555444333211111111000000 0111 1 22233322222222 2233
Q ss_pred HhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHH-HHHHHH-HHHHHHHH-HhhhcccccccccccchhH
Q 013318 217 CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI-IPLFAY-SGLQQAFV-WAEFTKEIVTPALGVSGVG 293 (445)
Q Consensus 217 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l-~~~~~~-~g~~~~f~-~~~~~~~~~~~~~~~~~~g 293 (445)
+.++++++.+.+. ++...+..++.....++..+++.+.+. +--+++ -|....+- .+.|... .-+++..++.
T Consensus 218 ~~v~~~~~~~~~~----~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~--~~gls~~~ll 291 (438)
T COG2270 218 LNVHDAEKISSPP----PTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAA--DLGLSSTELL 291 (438)
T ss_pred hcccccccccccc----hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHH--HcCccHHHHH
Confidence 4455544321111 111223444444444455555544332 222333 23332221 2333321 1234445677
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhh
Q 013318 294 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS 373 (445)
Q Consensus 294 ~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 373 (445)
++.....+.+++|.++.|++.||++.|+ ++..+.++.....+... +...+ .-.+++..+.|+..+..+...-
T Consensus 292 l~g~~~~vvA~lg~ii~g~Ld~rfg~k~-vl~~~lvi~~~~~~~~~--~~~~~-----~~f~i~gll~g~s~G~~qA~SR 363 (438)
T COG2270 292 LIGIALSVVAALGAIIAGFLDERFGSKP-VLMIGLVILSIAALYLI--FLEGE-----LDFWILGLLVGTSLGGAQASSR 363 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCce-eehHHHHHHHHHHHHHH--Hcccc-----HHHHHHHHHHHHhcchHHHHHH
Confidence 7778888999999999999999999986 45566665443322222 22121 3466777889999999999999
Q ss_pred HHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhhc-----chhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 374 ALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGP-----YISLQAMLIVMVVGICVALVGILFLTIQ 435 (445)
Q Consensus 374 ~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 435 (445)
++++++.|+++++ .||+|+...-.++..|++.-. ..+....+..+.+++.++.+.++++..+
T Consensus 364 Sy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 364 SYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 9999999998775 689999988777777664432 2355666777777778888777655433
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.38 E-value=5.8e-10 Score=110.93 Aligned_cols=316 Identities=11% Similarity=0.083 Sum_probs=175.9
Q ss_pred cCCCCchHHHHHHHH----HHHHhhhhHHHHHHH----hCcch-hhhhhhHHHHHHHHHh-hhcc------hhhHHhHHH
Q 013318 56 TEGNLGTISLGILYT----SFTCFSLVASLVVRV----LGSKN-ALILGTTGYWLFVAAN-LFPS------WYTMVPASL 119 (445)
Q Consensus 56 ~~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr----~G~k~-~l~~g~~~~~~~~~~~-~~~~------~~~li~~r~ 119 (445)
+..+++....+.++. .-++.-++.|.++|| +||+| -+++|.+.+++...+. ..|+ +.-.++.-.
T Consensus 41 dv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~ 120 (467)
T COG2211 41 DVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYM 120 (467)
T ss_pred cccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHH
Confidence 346777766666554 347788899999995 77665 4555656677665554 4442 223335678
Q ss_pred HhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcch
Q 013318 120 YLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTT 199 (445)
Q Consensus 120 l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~ 199 (445)
+.|++...+...-.+..++..+ +++||.+..+.-+.+.++|..+-..+...+....+.. +...||+
T Consensus 121 l~~l~YT~vniPy~al~~~iT~---------d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~----~~~~g~~- 186 (467)
T COG2211 121 LLGLGYTLVNIPYGALGPEITQ---------DPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGG----DKALGYQ- 186 (467)
T ss_pred HHHHHHHheeCchhhcchhhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----cchhhHH-
Confidence 8888888888777778887774 4789999888877777777544433332222221110 0123443
Q ss_pred hHHHHHHHHHHHHHHHHHh-ccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH---
Q 013318 200 LLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW--- 275 (445)
Q Consensus 200 ~~~~i~~~l~~~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~--- 275 (445)
...++++++..+..+.+++ ++|+..+..+. +...+.+.++ .....+|||.++.+....++.........
T Consensus 187 ~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~----~~~~~~~~~~---~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~ 259 (467)
T COG2211 187 GTALVLGVIGVILLLFCFFNVKERVVETQPT----KTGVKLKLKD---SFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIM 259 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCccccC----cccccccHHH---HHHHHHccchHHHHHHHHHHHHHHHHHHhhhh
Confidence 2222223322222222222 44443211111 0001112222 22346778887665543333222111111
Q ss_pred hhhcccccccccccc--hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhH
Q 013318 276 AEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLY 353 (445)
Q Consensus 276 ~~~~~~~~~~~~~~~--~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (445)
.+|.++ .+|.. ...........+.+++.++..++.+|+|+|+. ...+.++..++.+. +.+.+... ..+
T Consensus 260 ~yy~~y----~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~-~~~~~~~~~i~~~~--~~f~~~~~---~~l 329 (467)
T COG2211 260 VYYVTY----VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKL-FLIGLLLLAVGYLL--LYFTPAGS---VVL 329 (467)
T ss_pred heeEEE----EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHH-HHHHHHHHHHHHHH--HHhhcCcc---hHH
Confidence 223322 23332 34455666777777778999999999998874 45666666655432 22333222 245
Q ss_pred HHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-------hh-hHHHHHHHHHHHHHHH
Q 013318 354 PLIMAALLGIGDGVLNTQLSALLGILFKHDT-------EG-AFAQLKVWQCASIAVV 402 (445)
Q Consensus 354 ~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-------~~-a~~~~~~~~~~g~~ig 402 (445)
.++..++.+++.+..++..+++++|..+.++ ++ .+|.+.+++=+|.+++
T Consensus 330 ~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala 386 (467)
T COG2211 330 IVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALA 386 (467)
T ss_pred HHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHH
Confidence 5666688889999999999999988764221 12 3676666665555443
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.38 E-value=1.4e-09 Score=107.40 Aligned_cols=399 Identities=12% Similarity=0.041 Sum_probs=224.4
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhh-hhhccCCC----CchHHHHHHHHHH----HHhhhhHHHHHHH-hCcchhhhh
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLE-TTVNTEGN----LGTISLGILYTSF----TCFSLVASLVVRV-LGSKNALIL 94 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~~~~~----~g~~~~~~~~~~~----ai~~l~~g~l~dr-~G~k~~l~~ 94 (445)
+..|....+...=++.-.+|++++.+. -.+..+.+ ++......++..| -+..++.|+++|| +|+|++++.
T Consensus 18 ~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~l 97 (498)
T COG3104 18 GQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVL 97 (498)
T ss_pred CCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 345666666667788888888776432 23322222 3333322333333 2467789999998 899999999
Q ss_pred hhHHHHHHHHHhhh---cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhh
Q 013318 95 GTTGYWLFVAANLF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQF 171 (445)
Q Consensus 95 g~~~~~~~~~~~~~---~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~ 171 (445)
|.+++.+..+.... .+...++++=++.++|.|.+=+...+++.+..+++ +.||-..+++++...++|..
T Consensus 98 Gail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~--------DprrD~gFt~fY~~iNiGsl 169 (498)
T COG3104 98 GAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKD--------DPRRDGGFTLFYMGINIGSL 169 (498)
T ss_pred HHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCC--------CcccCCCccEEEEEeehHHH
Confidence 99988876655432 35667777888888999999988889999988652 23466778888888899999
Q ss_pred hhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcc--------cCcccccccch--------
Q 013318 172 VGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED--------KGEKETADASV-------- 235 (445)
Q Consensus 172 iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~--------~~~~~~~~~~~-------- 235 (445)
++|++...+..+. +|. ..|...++-+..+++..++.|.... .+.+.....+.
T Consensus 170 ~~p~i~~~~~~~~-----------g~~-~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (498)
T COG3104 170 IAPIITGLLAINY-----------GWH-VGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMI 237 (498)
T ss_pred HHHHHHHHHHHhh-----------CHH-HHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHH
Confidence 9998888776443 443 4455555555566655544442111 11100000000
Q ss_pred --------hhhhHHH---------HHHHHHHHhh------cc-chhHHHHHHHHHHHH-----HHH-HHHhhhccccccc
Q 013318 236 --------NFYSYLV---------SLSKSITTLL------AD-VRMLLIIPLFAYSGL-----QQA-FVWAEFTKEIVTP 285 (445)
Q Consensus 236 --------~~~~~~~---------~~~~~~~~~l------~~-~~~~~l~~~~~~~g~-----~~~-f~~~~~~~~~~~~ 285 (445)
...+... .......+.+ .+ +|.+..++++...-+ ++. -..+.+.....++
T Consensus 238 ~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~ 317 (498)
T COG3104 238 LAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNR 317 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcc
Confidence 0000000 0000001111 11 234444444333222 221 1112233222223
Q ss_pred c-cccc-hhHHHHHHHHHHHHHHHhhhhccccCCCC--cc----chHhHHHHHHHHHHHHHHhh--ccCC-CCccchhHH
Q 013318 286 A-LGVS-GVGGAMAVYGAFDAICSLAAGRLTTGLPS--IT----FIVSGGAIAQVVVFLWILIN--YSVT-SGVLGTLYP 354 (445)
Q Consensus 286 ~-~~~~-~~g~~~~~~~i~~~~g~~~~G~l~d~~g~--~~----~~i~~g~~~~~~~~~~~~~~--~~~~-~~~~~~~~~ 354 (445)
+ +|.+ ..+..-++..+..++.+++.-++..|+++ |+ .-..+|..++.++++..... +..+ .........
T Consensus 318 ~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~l 397 (498)
T COG3104 318 QIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWL 397 (498)
T ss_pred cccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHH
Confidence 3 3322 24455667777777777766665544322 11 11245555555554321111 2211 111113456
Q ss_pred HHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhc-------c---hhHHHHHHHHHHHHH
Q 013318 355 LIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP-------Y---ISLQAMLIVMVVGIC 423 (445)
Q Consensus 355 ~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~-------~---~~~~~~~~i~~~~~~ 423 (445)
...+++.++|+=+..|+-.+...++.|+.. ..++|++-+.+..|..++-.+++ . ......+..++...+
T Consensus 398 il~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i 477 (498)
T COG3104 398 VLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAI 477 (498)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHH
Confidence 678889999999999999999999999874 34788877777777776654544 1 123445566666666
Q ss_pred HHHHHHHHHHHHHHhhhcCC
Q 013318 424 VALVGILFLTIQVEKAFYSP 443 (445)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~ 443 (445)
...+..+...++.+|....+
T Consensus 478 ~~~~~~~~~~~~~~r~~~~~ 497 (498)
T COG3104 478 VIGILLLLLSPKLNRMMKGV 497 (498)
T ss_pred HHHHHHHHhhHHHHHhhcCC
Confidence 66666666777777766544
No 118
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.37 E-value=5.3e-11 Score=112.34 Aligned_cols=330 Identities=11% Similarity=0.037 Sum_probs=170.9
Q ss_pred HHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHH-HhhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhc
Q 013318 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA-ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (445)
Q Consensus 68 ~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~-~~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~ 146 (445)
.+...-+++...|.+.|++||||...+..+.-.++-. +...||+..+++.|.+.|+|.|+ .+...++-.+.-
T Consensus 122 v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~l------ 194 (528)
T KOG0253|consen 122 VFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFL------ 194 (528)
T ss_pred HHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhc------
Confidence 4445667888999999999999999888776555433 45789999999999999999988 333333333444
Q ss_pred cCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCccc-
Q 013318 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK- 225 (445)
Q Consensus 147 ~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~- 225 (445)
|...|+.-+=.. +.+..|.++-..++..+... .|||...+..-..++ +.....++++|+++-
T Consensus 195 ----p~~~r~~~~V~~-~~waig~v~ea~law~vm~~-----------~gwr~~l~~~~~pl~-~~a~f~~w~~ESpRf~ 257 (528)
T KOG0253|consen 195 ----PSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN-----------FGWRYLLFTSSTPLM-FAARFLVWVYESPRFY 257 (528)
T ss_pred ----cCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHhHHH-HHHHHHhhcccCcchh
Confidence 344566544433 56678888888888776543 368754443332222 222233567765431
Q ss_pred ---Ccccc-------------c----------c--cchhhhh--------HHHHHHHHHHHhhccchhH----HHHHHHH
Q 013318 226 ---GEKET-------------A----------D--ASVNFYS--------YLVSLSKSITTLLADVRML----LIIPLFA 265 (445)
Q Consensus 226 ---~~~~~-------------~----------~--~~~~~~~--------~~~~~~~~~~~~l~~~~~~----~l~~~~~ 265 (445)
.+++. . . +++++.. ..++.-..+.+++ .|++. ++....+
T Consensus 258 ~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLl-sp~lrkttlllw~iwf 336 (528)
T KOG0253|consen 258 LAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLL-SPKLRKTTLLLWRIWF 336 (528)
T ss_pred hhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhc-ChHHHHHHHHHHHHHH
Confidence 11100 0 0 0000000 0000001112222 22221 1221111
Q ss_pred -----HHHHHH----HHHHhh--------hccccc---ccccccchhHHH-HHHHHHHHHHHHhhhhccccCCCCccchH
Q 013318 266 -----YSGLQQ----AFVWAE--------FTKEIV---TPALGVSGVGGA-MAVYGAFDAICSLAAGRLTTGLPSITFIV 324 (445)
Q Consensus 266 -----~~g~~~----~f~~~~--------~~~~~~---~~~~~~~~~g~~-~~~~~i~~~~g~~~~G~l~d~~g~~~~~i 324 (445)
|.|... -+..+. +|.+.. .+... +..-+. ...-.+....|.++.+++.||+|||+.+
T Consensus 337 gnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s-~~~dYrdllitslaefPGlLIt~~iverlGRKkTM- 414 (528)
T KOG0253|consen 337 GNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLS-VAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTM- 414 (528)
T ss_pred hhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCcc-chhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHH-
Confidence 222110 010110 111110 01111 112222 1244566778889999999999999965
Q ss_pred hHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHH
Q 013318 325 SGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVF 403 (445)
Q Consensus 325 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~ 403 (445)
...+++..++.++.+... +. ....+..+..-++.++.....|.+..|+||...+ ...|.-....-+|+.+.+
T Consensus 415 al~l~~f~iflfll~~c~--~r-----n~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p 487 (528)
T KOG0253|consen 415 ALSLILFGIFLFLLTTCK--TR-----NAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSP 487 (528)
T ss_pred HHHHHHHHHHHHHHHHhc--Cc-----chhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhh
Confidence 455555544432211111 21 1222223333344444455778899999998754 455554444445666666
Q ss_pred Hhhcc--hhHHHHHHHHHHHHHHHHHHHHH
Q 013318 404 FIGPY--ISLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 404 ~i~~~--~~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
+++-. .+......+..++++++.++..+
T Consensus 488 ~iA~~~e~s~sl~i~vy~~~~ilagIavcf 517 (528)
T KOG0253|consen 488 VIAMRAELSTSLPIFVYGALFILAGIAVCF 517 (528)
T ss_pred HHHHHhccceeehHHHHHHHHHHHHHHhee
Confidence 55521 24455566666666766665543
No 119
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.36 E-value=4.5e-09 Score=101.97 Aligned_cols=327 Identities=16% Similarity=0.089 Sum_probs=182.1
Q ss_pred HHHhhhhHHHHHHHhC-----cchhhhhhhHHH-HHHH-HH-h----hhc--------ch---hhHHhHHHHhhhhhHHh
Q 013318 72 FTCFSLVASLVVRVLG-----SKNALILGTTGY-WLFV-AA-N----LFP--------SW---YTMVPASLYLGFAASII 128 (445)
Q Consensus 72 ~ai~~l~~g~l~dr~G-----~k~~l~~g~~~~-~~~~-~~-~----~~~--------~~---~~li~~r~l~Gig~g~~ 128 (445)
.+...+..|+.+|+.+ ||...+++.... .... .+ . +.. .+ ......-.+.|+|.+..
T Consensus 27 ~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s 106 (403)
T PF03209_consen 27 VAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHAS 106 (403)
T ss_pred HHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHh
Confidence 4456678899999999 888777766433 2211 11 1 112 22 12334556778888777
Q ss_pred hhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHH
Q 013318 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGV 208 (445)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l 208 (445)
-++-.++++|.+ +|++|+++.++.|.+.-.|.+++..+...+...... .+ +.-++-..
T Consensus 107 ~T~~lALl~D~~----------~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~-----------~r-L~~v~~~~ 164 (403)
T PF03209_consen 107 GTSFLALLADLA----------PEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP-----------ER-LIQVIQGV 164 (403)
T ss_pred HHHHHHHHHhcC----------CHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH-----------HH-HHHHHHHH
Confidence 777777777776 688999999999999999999999887766644321 12 12222222
Q ss_pred HHHHHHH---HHhccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccc-
Q 013318 209 ITLGTIL---MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT- 284 (445)
Q Consensus 209 ~~~~~~l---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~- 284 (445)
.++...+ .++=.|++..++++..+ .+..++++..++ ...+|+...... +.+.+....+.......-|..
T Consensus 165 a~i~~~l~~ia~wg~E~r~~~~~~~~~---~~~~~f~~a~~~---~~~~~~a~~f~~-fl~l~t~a~~~QD~iLEPygg~ 237 (403)
T PF03209_consen 165 ALIALLLNLIALWGQEPRRSRRAAAAE---RPRPPFREAWRQ---VWASPQARRFFV-FLFLGTLAFFMQDVILEPYGGE 237 (403)
T ss_pred HHHHHHHHHHHHHhcccCCcccccCCC---CCCccHHHHHHH---HHhCCChhHHHH-HHHHHHHHHHhhHHHcCCchhH
Confidence 3333222 22222332222221111 112334444443 345666544322 222222211221111101111
Q ss_pred -cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHh-hccCCCCccchhHHHHHHHHHh
Q 013318 285 -PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLG 362 (445)
Q Consensus 285 -~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G 362 (445)
-+++++++.-.....+.+..+|-...|++..|-.++++....|+...+.++.++.. ...++ ...+-...+++|
T Consensus 238 Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~-----~~~~~~~~~l~G 312 (403)
T PF03209_consen 238 VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGS-----PWLFRPGVFLLG 312 (403)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhccc-----chHHHHHHHHHH
Confidence 24556677778888888988888888887664333334556777766666543222 22222 245667788999
Q ss_pred hhhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhh--------------cchhHHHHHHHHHHHHHHHHH
Q 013318 363 IGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG--------------PYISLQAMLIVMVVGICVALV 427 (445)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~--------------~~~~~~~~~~i~~~~~~~~~~ 427 (445)
++.+....-.-+..-++.++++. ...|.....|..+..++.+.+ +...|...|.+=+++++++..
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999887766777788765544 356776666765554443322 223455556555555555555
Q ss_pred HHHHH
Q 013318 428 GILFL 432 (445)
Q Consensus 428 ~~~~~ 432 (445)
....+
T Consensus 393 ll~~l 397 (403)
T PF03209_consen 393 LLGRL 397 (403)
T ss_pred HHHHh
Confidence 44443
No 120
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.17 E-value=6.3e-10 Score=118.34 Aligned_cols=129 Identities=12% Similarity=0.022 Sum_probs=99.8
Q ss_pred HHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCC
Q 013318 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (445)
Q Consensus 71 ~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~ 149 (445)
...++++++++++||+|||++++++.++.++..+.. +.++...+++.+++.|+..+..|++...+++++.
T Consensus 607 ~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~--------- 677 (742)
T TIGR01299 607 AVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY--------- 677 (742)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------
Confidence 445688899999999999999999988777665543 5566666777888999998899999999999997
Q ss_pred CccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCC
Q 013318 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 222 (445)
Q Consensus 150 ~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~ 222 (445)
|.++||+++|+..+...+|.++||+++..+.... ....+.+++++.+++.++.+++||+
T Consensus 678 -Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-------------~~~pf~i~a~~lll~~ll~~~LPET 736 (742)
T TIGR01299 678 -PSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-------------KAAPILFASAALACGGLLALKLPDT 736 (742)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------hHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999999999998887654321 1334555666666666666667654
No 121
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.15 E-value=3.3e-09 Score=105.83 Aligned_cols=104 Identities=20% Similarity=0.107 Sum_probs=71.5
Q ss_pred HHHHHHHHHhhhhHHHHHHHhCc-chhhhhhhHHHHHHHHH----hh-hc-chhhHHhHHHHhhhhhHHhhhhhhhHHHH
Q 013318 66 GILYTSFTCFSLVASLVVRVLGS-KNALILGTTGYWLFVAA----NL-FP-SWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (445)
Q Consensus 66 ~~~~~~~ai~~l~~g~l~dr~G~-k~~l~~g~~~~~~~~~~----~~-~~-~~~~li~~r~l~Gig~g~~~~~~~~~i~~ 138 (445)
+..-...+++++..|+...|.+. |+.++.|.++..+.-.. .. .+ .-+.++++|++.|+|.|..-. .-+|+++
T Consensus 78 aa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~ 156 (488)
T KOG2325|consen 78 AASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAV-LRAYIAD 156 (488)
T ss_pred HHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHH-HHHHHHh
Confidence 33344556677788889999885 77777777654433222 22 23 467778899999999775433 3677777
Q ss_pred hhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
.+ .+++|-|+++.......+|.++||.+...+
T Consensus 157 ~s----------~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 157 AS----------TVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred cc----------CccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 65 356788888887777788888888776544
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.11 E-value=3.2e-09 Score=106.16 Aligned_cols=135 Identities=16% Similarity=0.096 Sum_probs=96.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhh
Q 013318 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (445)
Q Consensus 66 ~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~ 144 (445)
+.......++.++.|++.||+|+|+.+..+..+..+.... ...++...+++..++.|++.+..++.....+.+..
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~---- 331 (399)
T PRK05122 256 TLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRV---- 331 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC----
Confidence 3344455678889999999999999998887765554433 24567767777899999999988877666666654
Q ss_pred hccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCC
Q 013318 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 222 (445)
Q Consensus 145 ~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~ 222 (445)
|+++||+++|++.....+|..+|+.+.+.+..+ .||+ ..+.+.+++.+++.++.++++++
T Consensus 332 ------~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----------~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 332 ------PPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-----------FGYP-SIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------cCHH-HHHHHHHHHHHHHHHHHHHhccc
Confidence 568899999999999999998888777665432 2343 34555555555665555555543
No 123
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.10 E-value=7.6e-08 Score=92.07 Aligned_cols=236 Identities=11% Similarity=0.053 Sum_probs=125.6
Q ss_pred ccCCCCchHHHHHHHHHH----HHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhhhcchhhHHhHHHHhhhhhHHhhh
Q 013318 55 NTEGNLGTISLGILYTSF----TCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWV 130 (445)
Q Consensus 55 ~~~~~~g~~~~~~~~~~~----ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~~~~~~~li~~r~l~Gig~g~~~~ 130 (445)
.++.+...-..+.+|... ++...+.|.+.||+|||+..+..++++.+..+.-..+++..++++|++.|++.++++.
T Consensus 61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 345677766666665533 4455678899999999998888877766655444578999999999999999999988
Q ss_pred hh-hhHHHHhhhhhhhccCCCccchhhhhhhHHH-HHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHH
Q 013318 131 GE-GTYLTAAALSHASNHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGV 208 (445)
Q Consensus 131 ~~-~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~-~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l 208 (445)
+. .-++.|+-+ ++. |++..+.-++... ....+-.+..++++..+....+ .+ +...|....++
T Consensus 141 ~FEsW~V~Eh~~-----~g~-~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~---------~g-~vaPF~~a~~~ 204 (354)
T PF05631_consen 141 AFESWMVHEHNK-----RGF-PQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG---------FG-PVAPFDAAIVL 204 (354)
T ss_pred HHHHHHHHHHHH-----cCC-ChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC---------CC-CcchHHHHHHH
Confidence 84 445555532 121 2233333333211 1112223344445544432221 11 12235444444
Q ss_pred HHHHHHHHHh-ccCCcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHH-HHHHHHHHHHhhhcccccccc
Q 013318 209 ITLGTILMCF-LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA-YSGLQQAFVWAEFTKEIVTPA 286 (445)
Q Consensus 209 ~~~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~-~~g~~~~f~~~~~~~~~~~~~ 286 (445)
..++.++... -+|...++.+. .+...+.++. .....+|||++.+..... +-|....|+.-|-| .+...+
T Consensus 205 l~~~~~~I~~~W~ENyg~~~~~-----~~~~~~~~~a---~~~i~~d~ril~LG~~qslFE~smy~FVflWtP-aL~~~~ 275 (354)
T PF05631_consen 205 LAVAAVLILKTWPENYGDTSSS-----SSLSGSFREA---WRAILSDPRILLLGLIQSLFEGSMYLFVFLWTP-ALDPDD 275 (354)
T ss_pred HHHHHHHHHhcccccCCCcccc-----cchHHHHHHH---HHHHHcCchhHHHHHHHHHHHHHHHHheeeeec-eecCCC
Confidence 4444333221 22221111110 0011122222 223456899887754322 22222233322333 221111
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhccccC
Q 013318 287 LGVSGVGGAMAVYGAFDAICSLAAGRLTTG 316 (445)
Q Consensus 287 ~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~ 316 (445)
..-..|++++.+-++.++|+.++.++..|
T Consensus 276 -~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 276 -EELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 11257899999999999999999876544
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.08 E-value=3.8e-09 Score=106.47 Aligned_cols=136 Identities=15% Similarity=0.224 Sum_probs=97.7
Q ss_pred HHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-h-hc---chhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhh
Q 013318 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-FP---SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (445)
Q Consensus 71 ~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~-~~---~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~ 145 (445)
...++.++.|++.||+|+|+++.++.++..+..... . .+ ++..+++.+++.|++.+...+....++++..
T Consensus 263 ~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~----- 337 (418)
T TIGR00889 263 SEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEV----- 337 (418)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
Confidence 445677899999999999999999988776643332 2 22 2455667899999999988888888888887
Q ss_pred ccCCCccchhhhhhhHHH-HHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCC
Q 013318 146 NHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKE 222 (445)
Q Consensus 146 ~~~~~~~~~rg~~~g~~~-~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~ 222 (445)
|+++||+++|+.+ ...++|..+||++++.+..+.+. .+.+||+ ..|.+.+++.++..++. +++||+
T Consensus 338 -----p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~-----~~~~~~~-~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 338 -----PVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFA-----YGTFDWQ-TMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred -----CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcc-----ccCCchH-HHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4679999999996 56789999999999877654320 1124675 34555555555554443 556664
No 125
>PRK10054 putative transporter; Provisional
Probab=99.07 E-value=3.1e-09 Score=106.26 Aligned_cols=165 Identities=16% Similarity=0.101 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHH
Q 013318 257 MLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF 335 (445)
Q Consensus 257 ~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~ 335 (445)
++.+....+..........+.++.++.+ .+++.+++|+..+.+.++..+++++.|+++||+|||+. +..+.++..++.
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~-~~~~~~~~~~~~ 87 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRY-MLLAITAFASGF 87 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh-HHHHHHHHHHHH
Confidence 3444333444443333444455554432 35666789999999999999999999999999999874 456665555443
Q ss_pred HHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcch---hH
Q 013318 336 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI---SL 411 (445)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~~---~~ 411 (445)
+ ...+.++ +...++...+.|.+.+...+...++..|.+|+++ +.++|+.+...++|..+++.+.+.+ ++
T Consensus 88 ~--~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~ 160 (395)
T PRK10054 88 I--AIPLVNN-----VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSI 160 (395)
T ss_pred H--HHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3 2233433 1333444556676666777778889999987664 4578988888888888877666543 45
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013318 412 QAMLIVMVVGICVALVGI 429 (445)
Q Consensus 412 ~~~~~i~~~~~~~~~~~~ 429 (445)
+..+++.+++++++.+..
T Consensus 161 ~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 161 NLPFWLAAICSAFPLVFI 178 (395)
T ss_pred CcHHHHHHHHHHHHHHHH
Confidence 556666666656554433
No 126
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.03 E-value=4.8e-09 Score=107.41 Aligned_cols=151 Identities=11% Similarity=0.139 Sum_probs=107.3
Q ss_pred hhhcccccc---cccccchhHHHHHHHHHHHHHHHhhhhccccC-CCCccchHhHHHHHHHHHHHHHHhhccCCCCccch
Q 013318 276 AEFTKEIVT---PALGVSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT 351 (445)
Q Consensus 276 ~~~~~~~~~---~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~-~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (445)
+.++.++.+ .+++..+.|.+...+.++..++++++|+++|| +|||+. +..+.++..++.+ ++.+.++ +
T Consensus 31 ~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~-l~~~~~~~~~g~~--~~~~~~~-----~ 102 (475)
T TIGR00924 31 GILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT-MVLGGIVLMLGHF--MLAMSIY-----P 102 (475)
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH-HHHHHHHHHHHHH--HHHhccc-----H
Confidence 344444433 24555678999999999999999999999999 799874 4677766666543 2334332 1
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC----chhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHH
Q 013318 352 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD----TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGIC 423 (445)
Q Consensus 352 ~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~----~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~ 423 (445)
...++...+.|++.+...+...+++++.+|++ ++.++++++...++|..+|+.+.+. .++++.+.+.++.++
T Consensus 103 ~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~ 182 (475)
T TIGR00924 103 DLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMV 182 (475)
T ss_pred hHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 34455666789999998899999999999754 3347888888888898888777654 367777777776666
Q ss_pred HHHHHHHHHHH
Q 013318 424 VALVGILFLTI 434 (445)
Q Consensus 424 ~~~~~~~~~~~ 434 (445)
++.+.++...+
T Consensus 183 ~~~l~~~~~~~ 193 (475)
T TIGR00924 183 IGLLTFFAGRH 193 (475)
T ss_pred HHHHHHHHccc
Confidence 66655554443
No 127
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.02 E-value=4.8e-09 Score=102.84 Aligned_cols=142 Identities=15% Similarity=0.102 Sum_probs=98.1
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHH-HhhccCCCCccchhHHHHHHHHHhh
Q 013318 285 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLGI 363 (445)
Q Consensus 285 ~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~G~ 363 (445)
.+.+..++|.+.+...++.++++++.|+++||+|||+.+ ..+.++..++..+. .....++.+ ...+++..++.|+
T Consensus 29 ~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~ 104 (365)
T TIGR00900 29 GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM-IGADLIRAVLVAVLPFVALLGGLN---IWQVYVLAGILAI 104 (365)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH-HHHHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH
Confidence 344556789999999999999999999999999998854 45544433332211 111111112 3456677888899
Q ss_pred hhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHHH
Q 013318 364 GDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGIL 430 (445)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~~ 430 (445)
+.+...+...+++.|.+|+++ +.+++..+....+|..+++.+.+. .+..+.+.+.++..+++.+...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 105 AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998764 457899988888888887766644 3455566665555555544433
No 128
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.02 E-value=7.8e-09 Score=86.34 Aligned_cols=101 Identities=18% Similarity=0.172 Sum_probs=84.4
Q ss_pred HHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCC
Q 013318 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (445)
Q Consensus 71 ~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~ 149 (445)
...+++++.|++.||+|||+.+..+.....+..... ..++...+...+++.|++.+..++....++.|..
T Consensus 10 ~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------- 80 (141)
T TIGR00880 10 GQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY--------- 80 (141)
T ss_pred HHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC---------
Confidence 345678889999999999999998887666554433 4577778888999999999999988888888887
Q ss_pred CccchhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 150 ~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
++++|++..++.+....+|..+|+.+...+.
T Consensus 81 -~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 81 -PPEERGVALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred -ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 4678999999999999999999998887765
No 129
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.02 E-value=2.2e-08 Score=100.02 Aligned_cols=128 Identities=13% Similarity=-0.004 Sum_probs=87.7
Q ss_pred HHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCC
Q 013318 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (445)
Q Consensus 71 ~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~ 149 (445)
...+++++.|++.||+|+|+.+..+.....+..... ..++...++..+++.+++.|...+....+..+..
T Consensus 264 ~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~--------- 334 (393)
T PRK15011 264 LEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLM--------- 334 (393)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------
Confidence 334567899999999999998887765443332222 3456666667888888887776666556666664
Q ss_pred CccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccC
Q 013318 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRK 221 (445)
Q Consensus 150 ~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~ 221 (445)
|++||++.++++...++|..+|+++++.+..+ .+|+. .+.+..++.+++.+..+++|+
T Consensus 335 --p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~-----------~g~~~-~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 335 --PGQAGSATTLYTNTSRVGWIIAGSLAGIVAEI-----------WNYHA-VFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hhhHH-HHHHHHHHHHHHHHHHHhhcC
Confidence 45799999999988999999999998877533 24543 344445555555555556653
No 130
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.98 E-value=1.3e-07 Score=95.50 Aligned_cols=332 Identities=15% Similarity=0.121 Sum_probs=172.3
Q ss_pred hhhhhccCCCCchHHHHHHHHHHHH---hhhhHHHHHHHhC-----cchhhhhhhHHHHHHHHHh-h----hcchhhHHh
Q 013318 50 LETTVNTEGNLGTISLGILYTSFTC---FSLVASLVVRVLG-----SKNALILGTTGYWLFVAAN-L----FPSWYTMVP 116 (445)
Q Consensus 50 ~~~~i~~~~~~g~~~~~~~~~~~ai---~~l~~g~l~dr~G-----~k~~l~~g~~~~~~~~~~~-~----~~~~~~li~ 116 (445)
+.+.+.++.+++......+.....+ ..++.|.++|-+- ||+-++++.++..+..... . ..+......
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 4445555667776655554443332 4568999999763 5555666665443323221 1 234445545
Q ss_pred HHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCC
Q 013318 117 ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTS 196 (445)
Q Consensus 117 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~ 196 (445)
.-++.-+|.+...+..-+.+.|...+ +|++||...+..|.....|.++|..+++.+....+
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~--------~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~----------- 152 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARR--------EPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG----------- 152 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhc--------CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-----------
Confidence 55777888888888888888888865 34559999999999999999999888776654432
Q ss_pred cchhHHHHHHHHHHHHHHHHHhccCCccc-Ccccc---cccch-hhhhHHHHHHHHHHHhhccchhHHHHH-HHHHHHHH
Q 013318 197 GTTLLFIVFLGVITLGTILMCFLRKEEDK-GEKET---ADASV-NFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQ 270 (445)
Q Consensus 197 w~~~~~~i~~~l~~~~~~l~~~l~~~~~~-~~~~~---~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~l~~-~~~~~g~~ 270 (445)
++. .|.+...+..+..+..+++.+++++ ++++. .+++. ......++..++.++.+++|.++.... ..++....
T Consensus 153 ~~~-~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 231 (433)
T PF03092_consen 153 PQG-VFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLP 231 (433)
T ss_pred CeE-EehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence 222 2444444444444444444432211 11110 01101 111225566777888888888775544 22222221
Q ss_pred HHHHHh-hhcccccccc---cccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHH-HHh--hcc
Q 013318 271 QAFVWA-EFTKEIVTPA---LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW-ILI--NYS 343 (445)
Q Consensus 271 ~~f~~~-~~~~~~~~~~---~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~-~~~--~~~ 343 (445)
...-.+ .+...-...+ ++.+..+.+..+..++.++|..+..+...+..-|+.+ ....++..+..+. +.+ .+.
T Consensus 232 ~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~-~~t~~~~~~~~l~~~~lv~~~n 310 (433)
T PF03092_consen 232 PSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIF-VVTTLVSVLASLFDLLLVTRWN 310 (433)
T ss_pred cCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHhcccEEEEEEEe
Confidence 111011 1100001122 4444567777777778888888777665555555533 3333332222110 000 110
Q ss_pred CCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchh-hHHHHHHHHHHHHHHH
Q 013318 344 VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVV 402 (445)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig 402 (445)
-.-+.-+....+.-.++..+......-....+.+++.|+..++ .|++...+.++|..++
T Consensus 311 ~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s 370 (433)
T PF03092_consen 311 LDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVS 370 (433)
T ss_pred eeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHH
Confidence 0000000011122223333333333333346788999988654 6776666666665444
No 131
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.98 E-value=2.2e-07 Score=93.75 Aligned_cols=295 Identities=17% Similarity=0.153 Sum_probs=170.0
Q ss_pred HhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhhhcchhhHHhHHHHhhhh--hHHhhhhhhhHHHHhhhhhhhccCCCc
Q 013318 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFA--ASIIWVGEGTYLTAAALSHASNHKLHE 151 (445)
Q Consensus 74 i~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~~~~~~~li~~r~l~Gig--~g~~~~~~~~~i~~~~~~~~~~~~~~~ 151 (445)
+....-|.++||+|||..+.+......+.........++.++ +.|+. .+..+....+|+++.+ .
T Consensus 77 i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~----~~~l~g~~~~~~s~~~a~vadis----------~ 142 (463)
T KOG2816|consen 77 ISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL----LLGLSGGFSAIFSVGFAYVADIS----------S 142 (463)
T ss_pred HHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh----hcccccchhhhhhhhhhheeecc----------c
Confidence 566788999999999999999987655544443334454443 33332 3456667788888887 4
Q ss_pred cchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-HhccCCcccCccc-
Q 013318 152 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKE- 229 (445)
Q Consensus 152 ~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~-~~l~~~~~~~~~~- 229 (445)
+++|....|+....+..+.++||.++.......+ ....+.+..+..++..+.. +++||+..+++++
T Consensus 143 ~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~------------~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~ 210 (463)
T KOG2816|consen 143 EEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG------------IALVFLIAAASGILSLLYMLLFLPESLQEKERSD 210 (463)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC------------chHHHHHHHHHHHHHHHHHhhccccccCcccccc
Confidence 6789999999999999999999999887764432 1334545455444554433 5677765433322
Q ss_pred cccc--c-hh-hhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh-hhccccc-ccccccchhHHHHHHHHHHH
Q 013318 230 TADA--S-VN-FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA-EFTKEIV-TPALGVSGVGGAMAVYGAFD 303 (445)
Q Consensus 230 ~~~~--~-~~-~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~-~~~~~~~-~~~~~~~~~g~~~~~~~i~~ 303 (445)
.+.+ . .+ ......+.++...+.-.+|..+.+.+..++.-.....-.. ..+.+.. .-+.+.++.+...+..++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~ 290 (463)
T KOG2816|consen 211 ATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILG 290 (463)
T ss_pred ccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHH
Confidence 1110 0 00 0011112222333322234444444333222211110001 1111111 12456667777777777777
Q ss_pred HHHHhhhh-ccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhcc-
Q 013318 304 AICSLAAG-RLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK- 381 (445)
Q Consensus 304 ~~g~~~~G-~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~- 381 (445)
.++.++.. .+...++.|+ ++..|+........+ ..+..+. +.++....+ ........|...++.+.+.+
T Consensus 291 ~i~~l~~~~~l~~~l~~~~-~i~lGl~~~~~~~~~--~af~~~~-----w~~~~~~v~-~~~~~~~~pa~~s~~s~~v~~ 361 (463)
T KOG2816|consen 291 IISQLLLLPLLSSILGEKR-LISLGLLSEFLQLLL--FAFATET-----WMMFAAGVV-VALAGIVFPAIRAFASILVSP 361 (463)
T ss_pred HHHHHHHHHHHHHHHhhhh-HhhHHHHHHHHHHHH--HHHhccc-----hhhhHHHHH-HHhhcchhHHHHhHHHhhccc
Confidence 78887654 6777777776 677888777766543 2333222 233433333 33344566777788888875
Q ss_pred CCchhhHHHHHHHHHHHHHHHH
Q 013318 382 HDTEGAFAQLKVWQCASIAVVF 403 (445)
Q Consensus 382 ~~~~~a~~~~~~~~~~g~~ig~ 403 (445)
++++.++++....+.+...++.
T Consensus 362 ~e~g~v~~~is~i~~l~~~~~~ 383 (463)
T KOG2816|consen 362 EEQGKVFGIISGIEGLSGVVSP 383 (463)
T ss_pred ccccchhhHHHHHHHHhhhhhH
Confidence 4566789998888888776654
No 132
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.95 E-value=4.1e-08 Score=97.70 Aligned_cols=145 Identities=9% Similarity=0.011 Sum_probs=103.0
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHHHH----HHhhhhHHHHHHHhCcchhhhhhhHHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSF----TCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~----ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~ 103 (445)
++++.+.+..++...++.......|...++.+.+....+..+... .+..++++++.||+|+|+.+.++.+...+..
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~ 284 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRW 284 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 445555555555555544444444444445566655545444433 3345678899999999999999988776654
Q ss_pred HH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHH-HHHHHhhhhhhHHHHHhh
Q 013318 104 AA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAVL 181 (445)
Q Consensus 104 ~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~-~~~~lg~~iG~li~~~l~ 181 (445)
.. ...++++.++...+++|++.+..+++...|+.+. |+++|++..++++ ...++|.++|+++++.+.
T Consensus 285 ~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-----------~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~ 353 (382)
T TIGR00902 285 AIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-----------PGSEIAKLQALYNALAMGGLIAIFTAFAGFIY 353 (382)
T ss_pred HHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 3578888888899999999999999988888765 3567899999886 456789999999998887
Q ss_pred cC
Q 013318 182 KD 183 (445)
Q Consensus 182 ~~ 183 (445)
.+
T Consensus 354 ~~ 355 (382)
T TIGR00902 354 PT 355 (382)
T ss_pred Hh
Confidence 54
No 133
>PRK12382 putative transporter; Provisional
Probab=98.94 E-value=3.3e-08 Score=98.63 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=93.1
Q ss_pred HHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCC
Q 013318 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (445)
Q Consensus 71 ~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~ 149 (445)
...+++++.|++.||+|+||.+..+..+..+..... ..++...+++..++.|++.+...+...+.+.+..
T Consensus 261 ~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~--------- 331 (392)
T PRK12382 261 AFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRV--------- 331 (392)
T ss_pred HHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc---------
Confidence 445678899999999999999998877665544433 4566666777889999999988877666666665
Q ss_pred CccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHh
Q 013318 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCF 218 (445)
Q Consensus 150 ~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~ 218 (445)
++++||+++|+++....+|..+|+.+...+..+. ||+. .|...+++.+++.++.++
T Consensus 332 -~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-----------g~~~-~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 332 -PSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-----------GYPS-VFLAGAISAVLGIIVTIL 387 (392)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CchH-HHHHHHHHHHHHHHHHHh
Confidence 5788999999999999999999998888775432 3543 455555555555554443
No 134
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.94 E-value=1e-08 Score=100.10 Aligned_cols=135 Identities=20% Similarity=0.222 Sum_probs=104.3
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+.+..+++++.+.+.++..+++++.|+++||+|||+ ++..+.++..++.+. . .+.++ ....++..++.|++.
T Consensus 28 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~-~-~~~~~-----~~~~~~~~~l~g~~~ 99 (352)
T PF07690_consen 28 GLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR-VLIIGLLLFALGSLL-L-AFASN-----FWLLLIARFLLGIGS 99 (352)
T ss_dssp TTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH-HHHHHHHHHHHHHHH-H-HHHCC-----HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee-eEeehhhhhhhHHHH-h-hhhhh-----HHHHhhhcccccccc
Confidence 455668899999999999999999999999999988 566777776666322 2 23322 246777888999999
Q ss_pred hhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVG 428 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~~----~~~~~~~i~~~~~~~~~~~ 428 (445)
+...+...+++.+.+|++ ++.+++..+....+|..+++.+.+.+ ++.+.+++.+++.+++.++
T Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 100 GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 999999999999999885 45588999999999988887777543 4666778878777777664
No 135
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.94 E-value=1.6e-08 Score=100.21 Aligned_cols=138 Identities=16% Similarity=0.087 Sum_probs=98.6
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhh
Q 013318 285 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 364 (445)
Q Consensus 285 ~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 364 (445)
.+.+.++++++.+.+.++..+++++.|++.||+|||+. +..+.++..++.+. ..+.++ ....++..++.|++
T Consensus 35 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~-~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~l~g~~ 106 (385)
T TIGR00710 35 LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPV-LLLGLFIFALSSLG--LALSNN-----IETLLVLRFVQAFG 106 (385)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH-HHHHHHHHHHHHHH--HHHHcc-----HHHHHHHHHHHHcc
Confidence 34555678999999999999999999999999999874 45666555544332 223332 24566677889999
Q ss_pred hhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHHH
Q 013318 365 DGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGIL 430 (445)
Q Consensus 365 ~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~~ 430 (445)
.+...+..++++.|.+|+++ +.+++..+....+|..++..+.+. .++.+.+.+..+..++..+...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (385)
T TIGR00710 107 ASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIF 177 (385)
T ss_pred hhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 99998999999999998764 457888888888887777665543 3455666666655555544443
No 136
>PRK03545 putative arabinose transporter; Provisional
Probab=98.93 E-value=2.1e-08 Score=100.05 Aligned_cols=136 Identities=13% Similarity=0.146 Sum_probs=98.8
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+.+.+++|...+.+.++..+++++.|++.||+|||+ ++..+.++..++.+. ..+.++ +..+++..++.|++.
T Consensus 40 ~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~--~~~~~~-----~~~l~~~r~~~G~~~ 111 (390)
T PRK03545 40 HMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRK-LLIGLFVLFIASHVL--SALAWN-----FTVLLISRIGIAFAH 111 (390)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH-HHHHHHHHHHHHHHH--HHHhcc-----HHHHHHHHHHHHHHH
Confidence 455668899999999999999999999999999997 445666555554332 233433 245666677889988
Q ss_pred hhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGI 429 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~~i~~~~~~~~~~~~ 429 (445)
+...+...+++.+.+|+++ +.+.|+++....+|..+++.+.. ..++++.+.+.+++.++..+..
T Consensus 112 ~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 112 AIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL 180 (390)
T ss_pred HHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999998764 45889888888888887766653 3466777777776665554443
No 137
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.92 E-value=2.5e-08 Score=99.25 Aligned_cols=163 Identities=12% Similarity=0.034 Sum_probs=107.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHH
Q 013318 257 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 336 (445)
Q Consensus 257 ~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~ 336 (445)
++.+....+..+.......+.++....+-+.+.++.|+..+.+.++.++++++.|++.||+|||+ ++..+.++..++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~ 83 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKH-ILLFLVALCVIGNA 83 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHH-HHHHHHHHHHHHHH
Confidence 33333333444444333334444332223445567889999999999999999999999999887 45566666555543
Q ss_pred HHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhh----cchhH
Q 013318 337 WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG----PYISL 411 (445)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~----~~~~~ 411 (445)
+..+.++ +..+++..++.|++.+...+...+++.+.+|++++ .+.+.+.....+|..+++.+. ...++
T Consensus 84 --l~~~~~~-----~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 156 (382)
T PRK10091 84 --MFTLSSS-----YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSW 156 (382)
T ss_pred --HHHHhCc-----HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccH
Confidence 2344433 34566778889999988888888889999887644 478888777777777665444 33456
Q ss_pred HHHHHHHHHHHHHHHH
Q 013318 412 QAMLIVMVVGICVALV 427 (445)
Q Consensus 412 ~~~~~i~~~~~~~~~~ 427 (445)
.+.+.+.++..++..+
T Consensus 157 r~~f~~~~~~~~~~~~ 172 (382)
T PRK10091 157 RYTFLLIAVFNIAVLA 172 (382)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6777776665554443
No 138
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.91 E-value=5.5e-08 Score=100.24 Aligned_cols=179 Identities=17% Similarity=0.230 Sum_probs=107.0
Q ss_pred hhccch-hHHHHHHHHHHHHHHHHHHhhhccccccccccc--chhHHHHHHHHHHHHHHHhhhhccccC-CCCccchHhH
Q 013318 251 LLADVR-MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSG 326 (445)
Q Consensus 251 ~l~~~~-~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~--~~~g~~~~~~~i~~~~g~~~~G~l~d~-~g~~~~~i~~ 326 (445)
.+|+|+ ++.+....+...+.........+.++ .+.++. ++.+.+...+........+++|+++|| +|||+. +..
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl-~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~-~~~ 93 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYL-VKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRV-IML 93 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH-HHH
Confidence 456765 44443333333332222223333333 223343 345555555544444555688999999 599874 456
Q ss_pred HHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-h--hhHHHHHHHHHHHHHHHH
Q 013318 327 GAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-E--GAFAQLKVWQCASIAVVF 403 (445)
Q Consensus 327 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~--~a~~~~~~~~~~g~~ig~ 403 (445)
+.++..++.. .+.+.++. ...+++..++.|++.+...+...+++++.+|+++ + .++++++...++|..+|+
T Consensus 94 g~~~~~ig~~--l~~~~~~~----~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp 167 (500)
T PRK09584 94 GAIVLAIGYA--LVAWSGHD----AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSM 167 (500)
T ss_pred HHHHHHHHHH--HHHHhccc----HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHH
Confidence 6666555533 22333221 1334455677889988888888899999998643 2 367888888888888887
Q ss_pred Hhhcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 404 FIGPY----ISLQAMLIVMVVGICVALVGILFLTIQVE 437 (445)
Q Consensus 404 ~i~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 437 (445)
.+.++ .++++.+.+.++...++.+.++...+..+
T Consensus 168 ~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~ 205 (500)
T PRK09584 168 LATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVK 205 (500)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 66654 36777788777666666666655544433
No 139
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.91 E-value=2.8e-08 Score=100.08 Aligned_cols=176 Identities=13% Similarity=-0.005 Sum_probs=107.3
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHH
Q 013318 252 LADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ 331 (445)
Q Consensus 252 l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~ 331 (445)
.|+|++..+....+...+..+......|....+.+.+..+.|++.+...++..+++++.|+++||++||+.+ ..+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l-~~~~~~~ 92 (417)
T PRK10489 14 KTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLI-LLARGTC 92 (417)
T ss_pred HhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEE-EehHHHH
Confidence 356766655443333333322222222322222233455789999999999999999999999999998754 4555444
Q ss_pred HHHHHHHH-hhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcch
Q 013318 332 VVVFLWIL-INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 409 (445)
Q Consensus 332 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~~ 409 (445)
.++..+.. ..+.+.++ +..+++..++.|++.+...+...+++.+..|+++ +.+.++.+....+|..+|+.+.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l 169 (417)
T PRK10489 93 GLGFIGLALNAFLPEPS---LLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL 169 (417)
T ss_pred HHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH
Confidence 43322111 11222222 2345566777788888777888888999997764 4577888777788877777666442
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHH
Q 013318 410 ----SLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 410 ----~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
++.+.+.+.++..+++.+...+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (417)
T PRK10489 170 IAAGGVAWNYGLAAAGTFITLLPLLR 195 (417)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 4566666655555555444433
No 140
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.89 E-value=7.4e-08 Score=96.47 Aligned_cols=124 Identities=15% Similarity=0.000 Sum_probs=86.4
Q ss_pred hhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhhcchhhHHhHHHHhhhh
Q 013318 50 LETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFA 124 (445)
Q Consensus 50 ~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~l~Gig 124 (445)
..|.+..+.+.+... .+.......++.++.|++.||+|+|+.+..+.....+.... ...++...+....++.|++
T Consensus 242 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 242 WLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF 321 (406)
T ss_pred HHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 344444444444332 22333345667889999999999999988765544443333 2345555566677888888
Q ss_pred hHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcC
Q 013318 125 ASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (445)
Q Consensus 125 ~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~ 183 (445)
.+...+...+++.+.. |+++||+..|+......+|..+||.+.+.+..+
T Consensus 322 ~~~~~~~~~~~~~~~~----------p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 322 VVGGQSVLYALAPLFY----------PTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred HHhHHHHHHHHHHHHc----------chhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc
Confidence 7776666677777776 577899999999999999999999998877643
No 141
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.88 E-value=5.4e-08 Score=99.91 Aligned_cols=143 Identities=14% Similarity=0.160 Sum_probs=97.1
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhccccC-CCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 287 LGVSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 287 ~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~-~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
++.++.+.+...+.....+..+++|+++|| +|||+. +..|.++..++.+. ....++.. ..+++..++.|+|.
T Consensus 47 ~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~-~~~g~~~~~~g~~~--~~~~~~~~----~ll~~~~~l~~ig~ 119 (489)
T PRK10207 47 FSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRT-IVLGAIVLAIGYFM--TGMSLLKP----DLIFIALGTIAVGN 119 (489)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHH-HHHHHHHHHHHHHH--HHHhccch----hHHHHHHHHHHhcc
Confidence 334455666666776677777889999999 999985 46777666665432 22332221 23445667789999
Q ss_pred hhhhhhhhHHHHhhccCCc---hhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGILFLTIQV 436 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~---~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 436 (445)
+...+...++++|.+|++. +++++.+....++|..+|+.+.++ .++++.|++..+..+++.+.+....++.
T Consensus 120 g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~ 197 (489)
T PRK10207 120 GLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMV 197 (489)
T ss_pred ccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhh
Confidence 9999999999999998653 236888888888888777666544 4677788776665566665555544343
No 142
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.88 E-value=5.5e-08 Score=98.97 Aligned_cols=144 Identities=17% Similarity=0.184 Sum_probs=98.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCC-CCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 364 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~-g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 364 (445)
+++..+.+.++..+.....++.+++|+++||+ |||+. +..|.++..++.++ +...++.. ...++...+..++
T Consensus 41 gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~-iliG~il~~lg~ll--l~~~~~~~----~~~~l~l~li~iG 113 (493)
T PRK15462 41 KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA-VMLGALLMAIGHVV--LGASEIHP----SFLYLSLAIIVCG 113 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH-HHHHHHHHHHHHHH--HHHhhcch----hHHHHHHHHHHHh
Confidence 45556778888888888899999999999999 98874 46777766655432 22222111 2233334445566
Q ss_pred hhhhhhhhhHHHHhhccCC---chhhHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 365 DGVLNTQLSALLGILFKHD---TEGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFLTIQV 436 (445)
Q Consensus 365 ~~~~~~~~~~~l~~~~~~~---~~~a~~~~~~~~~~g~~ig~~i~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~ 436 (445)
.+...+..+++++|.+|++ |.++++++....++|+.+++.+.+++ ++++.|.+.++..+++.+.++...++.
T Consensus 114 ~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l 192 (493)
T PRK15462 114 YGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHF 192 (493)
T ss_pred cccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 6677777789999999864 33478887777788888888777654 567777777666667766665444444
No 143
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.88 E-value=4.9e-08 Score=97.62 Aligned_cols=133 Identities=15% Similarity=0.073 Sum_probs=97.2
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhh
Q 013318 285 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 364 (445)
Q Consensus 285 ~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 364 (445)
.+.+.+++|...+...++..+++++.|++.||+|||+ ++..+.++..++.+. ..+.++ ...+++..++.|++
T Consensus 50 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~-~~~~~~~~~~~~~~~--~~~~~~-----~~~l~~~r~l~G~~ 121 (394)
T PRK10213 50 LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRY-VVILFAVLLTLSCLL--VSFANS-----FSLLLIGRACLGLA 121 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHH-HHHHHHHHHHHHHHH--HHHHCh-----HHHHHHHHHHHHHh
Confidence 3455667899888999999999999999999999987 455666666555432 233332 35667778899999
Q ss_pred hhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHHHHHHHHH
Q 013318 365 DGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVA 425 (445)
Q Consensus 365 ~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~~i~~~~~~~~ 425 (445)
.+...+...+++.|.+|++++ .+.+......++|..+++.+.+ ..++++.+++.+++.++.
T Consensus 122 ~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~ 187 (394)
T PRK10213 122 LGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLC 187 (394)
T ss_pred hHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 999889999999999987644 5788877777777777665554 346677777666554443
No 144
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.87 E-value=7.1e-08 Score=97.71 Aligned_cols=133 Identities=13% Similarity=0.083 Sum_probs=94.9
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhh
Q 013318 285 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 364 (445)
Q Consensus 285 ~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 364 (445)
.+++..+.|++.+.+.++.++++++.|++.||+|+|+ ++..+.++..++.+ ...+.++ +..+++..++.|++
T Consensus 53 ~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~-~~~~~~~~~~~~~~--~~~~~~~-----~~~l~~~~~l~g~~ 124 (434)
T PRK11663 53 LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARY-FMGIGLIATGIINI--LFGFSSS-----LWAFALLWVLNAFF 124 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCch-hHHHHHHHHHHHHH--HHHHHhH-----HHHHHHHHHHHHHH
Confidence 3455567899999999999999999999999999987 44566666555433 2233332 23445556677888
Q ss_pred hhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHHHHHHHHH
Q 013318 365 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVA 425 (445)
Q Consensus 365 ~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~~i~~~~~~~~ 425 (445)
.+...+...+++.+.+|++ ++.+.++++..+.+|..++..+.+ ..++.+.+++.+++.++.
T Consensus 125 ~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 125 QGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 8877788889999999865 556889998888888877765543 346666776666554433
No 145
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.87 E-value=7.4e-08 Score=93.58 Aligned_cols=136 Identities=21% Similarity=0.233 Sum_probs=100.8
Q ss_pred CCchHHHHHHHH----HHHHhhhhHHHHHHHhCcch-hhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhh
Q 013318 59 NLGTISLGILYT----SFTCFSLVASLVVRVLGSKN-ALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGE 132 (445)
Q Consensus 59 ~~g~~~~~~~~~----~~ai~~l~~g~l~dr~G~k~-~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~ 132 (445)
+.+....+.... ...++.++.+++.||+|+|+ .+.++..+..+..... ..++...+++..++.|++.+..++..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 286 (352)
T cd06174 207 GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPAL 286 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhH
Confidence 555544443333 44567778899999999999 9988887776655543 45667777888999999999999999
Q ss_pred hhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHH
Q 013318 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLG 212 (445)
Q Consensus 133 ~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~ 212 (445)
.+++.+.. |+++|++.+|+.....+.|..+|+.+...+.... +|+ ..+.+.+++.+++
T Consensus 287 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-----------~~~-~~~~~~~~~~~i~ 344 (352)
T cd06174 287 LTLASELA----------PPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-----------GYG-GVFLILAALALLA 344 (352)
T ss_pred HHHHHhhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------Ccc-hHHHHHHHHHHHH
Confidence 99998887 4689999999999999999999999888775432 343 3355555555555
Q ss_pred HHHH
Q 013318 213 TILM 216 (445)
Q Consensus 213 ~~l~ 216 (445)
.++.
T Consensus 345 ~i~~ 348 (352)
T cd06174 345 ALLL 348 (352)
T ss_pred HHHh
Confidence 4443
No 146
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.86 E-value=1.4e-07 Score=93.15 Aligned_cols=125 Identities=10% Similarity=0.078 Sum_probs=88.4
Q ss_pred HHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCc
Q 013318 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHE 151 (445)
Q Consensus 73 ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~ 151 (445)
.++.++.|++.||+|+|+.+.++..+..+.... ...++...++..+++.|++.+...+....++.+..
T Consensus 249 ~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~----------- 317 (375)
T TIGR00899 249 IPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLM----------- 317 (375)
T ss_pred HHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------
Confidence 446678999999999999988876654443332 23466666777889999998888777667776664
Q ss_pred cchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhcc
Q 013318 152 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLR 220 (445)
Q Consensus 152 ~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~ 220 (445)
|+++++++|++....++|..+|+.+...+.... +|+ ..+.+.+++.+++.++..+++
T Consensus 318 ~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-----------g~~-~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 318 PGRAGAATTLYTNTGRVGWIIAGSVGGILAERW-----------SYH-AVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------cch-hHHHHHHHHHHHHHHHHheec
Confidence 456789999999999999999999888765432 343 345555555555555545554
No 147
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.85 E-value=1.4e-07 Score=96.12 Aligned_cols=176 Identities=13% Similarity=0.128 Sum_probs=123.3
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhhhc-cCCCCchHHHHHHHH----HHHHhhhhHHHHHHHhCcc--hhhhhhhH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVN-TEGNLGTISLGILYT----SFTCFSLVASLVVRVLGSK--NALILGTT 97 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~-~~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr~G~k--~~l~~g~~ 97 (445)
+..|+....-++.++.-.+..+...+...+. ++.+++...+..+.. +-.++++..|++.||+|.| +++..+..
T Consensus 278 ~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 278 RKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLI 357 (477)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 4567777776777776666665554444433 346666655333322 3456888999999999999 89888887
Q ss_pred HHHHHHH-Hhh--------hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHH
Q 013318 98 GYWLFVA-ANL--------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS 168 (445)
Q Consensus 98 ~~~~~~~-~~~--------~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~l 168 (445)
++.+..+ +.+ .++.+.+.+..++.|+..|..++..-++.++.. |+++.++++|+|......
T Consensus 358 ~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~Li----------P~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLI----------PPGREAEFFGLYAITGKA 427 (477)
T ss_pred HHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhC----------CCchhhHHHHHHHHHHHH
Confidence 7643222 333 456667778899999999999999999999998 467889999999999999
Q ss_pred hhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccC
Q 013318 169 HQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRK 221 (445)
Q Consensus 169 g~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~ 221 (445)
+..+||++-..+....+ +.| .-+....++.+++.++.++++.
T Consensus 428 ss~lGPll~g~i~~~tg----------~~r-~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 428 SSWLGPLLFGLITDATG----------SQR-YGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHHHHHHHHHHhC----------Cch-hHHHHHHHHHHHHHHHHhhccc
Confidence 99999988777665432 123 2233444455566666566654
No 148
>PRK10504 putative transporter; Provisional
Probab=98.84 E-value=5.2e-08 Score=99.72 Aligned_cols=167 Identities=11% Similarity=0.042 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHH
Q 013318 257 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 336 (445)
Q Consensus 257 ~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~ 336 (445)
++.+...++...+........+|....+.+.+..+.+.+.+.+.++..++.++.|+++||+|||+. ...+.++..++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~-~~~~~~~~~~~~~ 90 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNI-FFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHH
Confidence 344444444444443333344554433344555567888888889999999999999999999874 4455555444433
Q ss_pred HHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhcc----hhH
Q 013318 337 WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPY----ISL 411 (445)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~~----~~~ 411 (445)
. ..+.++ ...+++..++.|++.+...+...+.+.+.+|++++ .+++.++....+|..+++.+.+. .++
T Consensus 91 ~--~~~~~~-----~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw 163 (471)
T PRK10504 91 F--CALSGT-----LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASW 163 (471)
T ss_pred H--HHHhCC-----HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccH
Confidence 2 223332 24456678889999999888889999999987644 57888888888887777655533 456
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 013318 412 QAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 412 ~~~~~i~~~~~~~~~~~~~~ 431 (445)
.+.+.+...+..++.+....
T Consensus 164 ~~~f~~~~~~~~l~~~~~~~ 183 (471)
T PRK10504 164 HWIFLINIPVGIIGAIATLM 183 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 77777766655555544433
No 149
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.83 E-value=4.5e-08 Score=98.48 Aligned_cols=133 Identities=13% Similarity=0.123 Sum_probs=97.7
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+++..+.|++.+.+.++..+++++.|++.||+|||+ ++..+.++..++.. ...+.++ +..+++.-++.|++.
T Consensus 39 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~-~~~~~~~~~~~~~~--~~~~~~~-----~~~l~~~r~l~G~~~ 110 (412)
T TIGR02332 39 GLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARR-WIAGIMVLWGIAST--ATMFATG-----PESLYLLRILVGIAE 110 (412)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH-HHHHHHHHHHHHHH--HHHHhcC-----HHHHHHHHHHHHHHH
Confidence 445567899999999999999999999999999988 44566666555433 2234433 245667788899999
Q ss_pred hhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----------hhHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----------ISLQAMLIVMVVGICVAL 426 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----------~~~~~~~~i~~~~~~~~~ 426 (445)
+...+...+++.+.+|++ ++.+.++++....+|..++..+.+. .+.++.+.+.++..++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~ 182 (412)
T TIGR02332 111 AGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILG 182 (412)
T ss_pred hhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHH
Confidence 998888888999999875 5568899888888888777665532 256667777655544433
No 150
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.83 E-value=7.1e-08 Score=94.84 Aligned_cols=144 Identities=12% Similarity=-0.043 Sum_probs=92.8
Q ss_pred hhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHH
Q 013318 29 DVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (445)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~ 104 (445)
+.+.+.+.+++............+...++.+.+... .+.......+++++.|++.||+|||+.+.++..+..+...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 285 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMA 285 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Confidence 344444444444333332223333333334444332 2233334556788999999999999999888776655444
Q ss_pred Hh-hhcc--hhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 105 AN-LFPS--WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 105 ~~-~~~~--~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
.. ..++ ...++...++.|++.+..++....++.|.. ++++||++.|++.....+|..+|+.+...+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 355 (377)
T TIGR00890 286 AMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIF----------GPANSAANYGFLYTAKAVAGIFGGLIASHAL 355 (377)
T ss_pred HHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHh----------hhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 3332 223334567888888877776677777776 4678999999999999999999998887765
Q ss_pred c
Q 013318 182 K 182 (445)
Q Consensus 182 ~ 182 (445)
.
T Consensus 356 ~ 356 (377)
T TIGR00890 356 T 356 (377)
T ss_pred h
Confidence 3
No 151
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.83 E-value=5.2e-08 Score=97.38 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=83.7
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhh
Q 013318 287 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 366 (445)
Q Consensus 287 ~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 366 (445)
.+....+.+...+.+...+..++.|++.||++||+. +..+.++..++.+. ..+.++ .++..++.|++.+
T Consensus 35 ~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~v-l~~~~~~~~~~~~~--~~~~~~--------~~~~r~l~G~~~a 103 (393)
T PRK11195 35 YPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRV-MFIANGIKLLGCLL--MLFGIH--------PLLAYGLVGIGAA 103 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchh-hHHHHHHHHHHHHH--HHHHHH--------HHHHHHHHHHHHH
Confidence 344567888889999999999999999999999984 45666555443321 122211 1345567899999
Q ss_pred hhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhcch
Q 013318 367 VLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPYI 409 (445)
Q Consensus 367 ~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~~~ 409 (445)
...|...+++.|.+|++++ ++.|+.+....+|..+|+.+++.+
T Consensus 104 ~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 104 AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987654 588988888888888887776543
No 152
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.83 E-value=6.9e-08 Score=99.38 Aligned_cols=176 Identities=15% Similarity=0.113 Sum_probs=110.4
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHH---HhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhH
Q 013318 250 TLLADVRMLLIIPLFAYSGLQQAFV---WAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG 326 (445)
Q Consensus 250 ~~l~~~~~~~l~~~~~~~g~~~~f~---~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~ 326 (445)
..+|+|.+..++.......+..... .+++... .+-+...++++.+...+-.++.+++.|.+.||+.||+.+ +.
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~---lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrril-i~ 80 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ---LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRIL-IL 80 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHH-HH
Confidence 4578888877766555444432111 2333221 122344678888888889999999999999999998854 44
Q ss_pred HHHHHHH-HHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHH
Q 013318 327 GAIAQVV-VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFF 404 (445)
Q Consensus 327 g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~ 404 (445)
+-++.++ ..++..+.+....+ +..+++..++.|++.+...|..++++.++.|+++- .+.++.+...+++..+|+.
T Consensus 81 ~~~~~~~~~~~L~~l~~~~~~~---~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPa 157 (524)
T PF05977_consen 81 SQLLRALVALLLAVLAFFGLLS---PWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPA 157 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCcCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccch
Confidence 4443332 22211222222222 35677888999999999999999999999997654 4667666555555555544
Q ss_pred hhc----chhHHHHHHHHHHHHHHHHHHHHHH
Q 013318 405 IGP----YISLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 405 i~~----~~~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
+++ ..+..+.+.+-++..++++......
T Consensus 158 lgG~Lva~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 158 LGGILVAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 443 4466667776666555555444443
No 153
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.83 E-value=8.7e-08 Score=95.58 Aligned_cols=135 Identities=20% Similarity=0.152 Sum_probs=93.6
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+.+.++++...+.+.++..++.++.|+++||+|||+ ++..+.++..++.. ...+.++ ....++..++.|++.
T Consensus 34 ~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~-~l~~~~~~~~i~~~--~~~~~~~-----~~~~~~~~~l~g~~~ 105 (392)
T PRK10473 34 NASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKP-VAIPGAALFIIASL--LCSLAET-----SSLFLAGRFLQGIGA 105 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChH-HHHHHHHHHHHHHH--HHHHhCc-----HHHHHHHHHHHHhhh
Confidence 444557888888999999999999999999999987 44566655555433 2233332 234556677889988
Q ss_pred hhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVG 428 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~~i~~~~~~~~~~~ 428 (445)
+...+..++++.+.+|+++ +.+.+..+....+|..+++.+.. ..++.+.+++.+++.++..+.
T Consensus 106 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 106 GCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred hHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH
Confidence 8888888899999997654 45778877777777666655543 335556666666555544443
No 154
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.82 E-value=2.9e-07 Score=94.75 Aligned_cols=162 Identities=9% Similarity=0.026 Sum_probs=93.9
Q ss_pred HHHhhhHhhhhhhc-cCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH---h-hhcchh
Q 013318 42 LAYGAAQNLETTVN-TEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA---N-LFPSWY 112 (445)
Q Consensus 42 ~~~~~~~~~~~~i~-~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~---~-~~~~~~ 112 (445)
..++......|.+. .+.+.+... .........+++++.|++.||+|||+++..+.++..+.... . ..++..
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 34444444445443 333444322 22223344566778999999999999998887643322211 1 234566
Q ss_pred hHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccC
Q 013318 113 TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLG 192 (445)
Q Consensus 113 ~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~ 192 (445)
.++..+++.|++.+..+.....++.+.+ |++.||+.+|+.+.....+..++|.+...+....
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~----------p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~-------- 405 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMF----------PTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST-------- 405 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 6677888888877766666666777766 5788999999754444455566666655544221
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhccCCcc
Q 013318 193 GSTSGTTLLFIVFLGVITLGTILMCFLRKEED 224 (445)
Q Consensus 193 ~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~ 224 (445)
.+|+...+ ...+..+++.+..+++||+++
T Consensus 406 --~~~~~~~~-~~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 406 --QNLMMPAY-YLMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred --CCchHHHH-HHHHHHHHHHHHHHHhccccC
Confidence 12443222 333444444445566777543
No 155
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.82 E-value=7.5e-08 Score=96.47 Aligned_cols=136 Identities=13% Similarity=0.166 Sum_probs=98.1
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhh
Q 013318 285 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 364 (445)
Q Consensus 285 ~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 364 (445)
.+.+...+|+......+...+.+++.|+++||++||+ ++..+.++..++.+. ..+.++ +..+++..++.|++
T Consensus 41 ~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~-~l~~~~~~~~~~~~~--~~~~~~-----~~~l~~~~~l~g~~ 112 (400)
T PRK11646 41 LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKP-MIVTGMLMRAAGFAT--MAIAHE-----PWLLWLSCILSGLG 112 (400)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchH-HHHHHHHHHHHHHHH--HHHhcc-----HHHHHHHHHHHHHH
Confidence 3555668899999999999999999999999999887 456666666655432 233332 24556677888998
Q ss_pred hhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcch---hHHHHHHHHHHHHHHHHHH
Q 013318 365 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI---SLQAMLIVMVVGICVALVG 428 (445)
Q Consensus 365 ~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~~---~~~~~~~i~~~~~~~~~~~ 428 (445)
.+...+...+++.+.+|++ ++.++|+++....+|..+|+.+.+.+ ++.+.+++.++.+++..+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 113 GTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 8888888889999999765 45688999888888888877666543 4555666655555544433
No 156
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.82 E-value=9.7e-08 Score=95.96 Aligned_cols=146 Identities=12% Similarity=0.035 Sum_probs=100.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHH
Q 013318 257 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 336 (445)
Q Consensus 257 ~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~ 336 (445)
+..+...++..|+..+......|..-.+.+++..+.|++.+.+.++..+++++.|++.||+|+|+ .+..+.++..++.+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~-~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKA-GILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHH
Confidence 34444556666766544433333322223455668899999999999999999999999999987 45677766665543
Q ss_pred HHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhc
Q 013318 337 WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP 407 (445)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~ 407 (445)
+ .......++ +...++..++.|++.+..++..++++.+..|++++ +..+..+..+++|..+++.+.+
T Consensus 84 l-~~~~~~~~~---~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 84 L-FWPAAEIMN---YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred H-HHHHHhhcc---HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 111111111 34566777888999999999888999888877644 4678888888888887766553
No 157
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.80 E-value=6.1e-08 Score=95.95 Aligned_cols=137 Identities=15% Similarity=0.178 Sum_probs=98.3
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhh
Q 013318 285 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 364 (445)
Q Consensus 285 ~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 364 (445)
.+++.++++...+.+.++..+++++.|++.||+|||+ ++..+.++..++... ..+.++ ....++..++.|++
T Consensus 21 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~i~~~~--~~~~~~-----~~~~~~~~~l~g~~ 92 (377)
T PRK11102 21 FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKP-VILGGTLVFALAAVA--CALAQT-----IDQLIYMRFLHGLA 92 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChH-HHHHHHHHHHHHHHH--HHHHcc-----HHHHHHHHHHHHHH
Confidence 3455668899999999999999999999999999887 455666665554332 223322 24566677888999
Q ss_pred hhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHH
Q 013318 365 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGI 429 (445)
Q Consensus 365 ~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~ 429 (445)
.+...+...+++.+.+|++ ++.+.++.+....+|..+++.+.+. .+..+.+++.++++++..+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 93 AAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 9888888899999999876 4557888888878887777666543 355566666666655554443
No 158
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.80 E-value=1e-07 Score=94.88 Aligned_cols=114 Identities=11% Similarity=-0.026 Sum_probs=86.1
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+++..+.|.+.+.+.++..+++++.|++.||+|||+.+ ..+.++..++.+ ...+.++ +..+++..++.|++.
T Consensus 43 ~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~-~~~~~~~~~~~~--~~~~~~~-----~~~l~~~~~l~G~~~ 114 (405)
T TIGR00891 43 GLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM-VTSIVLFSAGTL--ACGFAPG-----YITMFIARLVIGIGM 114 (405)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHH--HHHHhcc-----HHHHHHHHHHHHhhh
Confidence 45566789999999999999999999999999998854 455555444432 2233332 345677788999999
Q ss_pred hhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhc
Q 013318 366 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 407 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~ 407 (445)
+...+...+++.|.+|++ ++.+.++++....+|..++..+.+
T Consensus 115 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 157 (405)
T TIGR00891 115 GGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYS 157 (405)
T ss_pred hhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888899999999866 445788888888888877765553
No 159
>PRK03699 putative transporter; Provisional
Probab=98.80 E-value=2.1e-07 Score=92.97 Aligned_cols=171 Identities=13% Similarity=0.031 Sum_probs=104.4
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhc-cCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVN-TEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~-~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~ 102 (445)
+.++.+.++.++....+.......|.+. ++.+++... .+.......++.+..|++.||+++|+.+..+..+..+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVL 284 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHH
Confidence 3445555555555444444444445443 334555433 23344456788999999999999999988776554443
Q ss_pred HHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 103 ~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
.... ..++...+.+..++.|++.+..++...++..+.. ++++++..|.......+|..+||.+...+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-----------~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~ 353 (394)
T PRK03699 285 MYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-----------KVASPKLVNFILTCGTIGTMLTFVVTSPIV 353 (394)
T ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------cCCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 3322 3455555556678888888877777665555543 345667788888888899999998887775
Q ss_pred cCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccC
Q 013318 182 KDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRK 221 (445)
Q Consensus 182 ~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~ 221 (445)
... |++. .+++..++..++.++.+++++
T Consensus 354 ~~~-----------g~~~-~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 354 AHF-----------GLQA-ALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHh-----------Cchh-hhhhhHHHHHHHHHHHHHHHH
Confidence 432 3433 333444444455444444443
No 160
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.80 E-value=9.9e-08 Score=95.37 Aligned_cols=115 Identities=16% Similarity=0.071 Sum_probs=89.5
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+.+.++.|++.+.+.++..+++++.|++.||+|||+ ++..+..+..++.+ ...+.++ +..+++..++.|++.
T Consensus 40 ~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~-~l~~~~~l~~~~~~--~~~~a~~-----~~~ll~~r~l~Gig~ 111 (393)
T PRK09705 40 GMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERR-SVAISLLLIAVGAL--MRELYPQ-----SALLLSSALLGGVGI 111 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchH-HHHHHHHHHHHHHH--HHHHCcc-----hHHHHHHHHHHHhHH
Confidence 445567899999999999999999999999999998 45677777666644 2344544 245667788999999
Q ss_pred hhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcc
Q 013318 366 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY 408 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~ 408 (445)
+...+..++++.+.+|++++.+.+.+......|..++..+.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~ 154 (393)
T PRK09705 112 GIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPW 154 (393)
T ss_pred HHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888999999998666668888888777777777666554
No 161
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.79 E-value=1.3e-05 Score=78.84 Aligned_cols=294 Identities=17% Similarity=0.139 Sum_probs=166.7
Q ss_pred HHhhhhHHHHHHHhCcchhhhhhhHHHHH-HHHHhhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCc
Q 013318 73 TCFSLVASLVVRVLGSKNALILGTTGYWL-FVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHE 151 (445)
Q Consensus 73 ai~~l~~g~l~dr~G~k~~l~~g~~~~~~-~~~~~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~ 151 (445)
...-++...+.|.++.|++++++.+...+ ..+..+.++...+-+.-++-|++.+... +-.+|+=... +
T Consensus 55 l~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~ev-ay~sYiys~v----------~ 123 (412)
T PF01770_consen 55 LAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAEV-AYYSYIYSVV----------D 123 (412)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHH-HHHHHheeec----------C
Confidence 34556788999999999999999986544 4444567888888888999999887633 3345554333 4
Q ss_pred cchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCccc----Cc
Q 013318 152 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GE 227 (445)
Q Consensus 152 ~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~----~~ 227 (445)
+++-.++.+..-+....|-.+|.+++-.+..... .+.+...+ +-.....+++++.+++|.+++. +.
T Consensus 124 ~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~---------~sy~~L~~-isl~~~~~a~~~~~fLP~~~~S~~f~r~ 193 (412)
T PF01770_consen 124 KEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG---------VSYFQLNY-ISLASVSLALLIALFLPMPKRSLFFHRK 193 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCHHHHHH-HHHHHHHHHHHHHHHcCCCCcccceecc
Confidence 6677788888888888888888888876653221 12223223 3333344566666888865431 10
Q ss_pred c---------ccc------ccc------h-hhhhH----HHHHHHHHHHhhccchhHH--HHHHHHHHHHHH--HHHHhh
Q 013318 228 K---------ETA------DAS------V-NFYSY----LVSLSKSITTLLADVRMLL--IIPLFAYSGLQQ--AFVWAE 277 (445)
Q Consensus 228 ~---------~~~------~~~------~-~~~~~----~~~~~~~~~~~l~~~~~~~--l~~~~~~~g~~~--~f~~~~ 277 (445)
+ +.+ +.+ . ..... .+...++.++..++|+++. +.-.+-.+|+.+ .++...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~L 273 (412)
T PF01770_consen 194 PPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSL 273 (412)
T ss_pred CccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 0 000 000 0 00111 1223344555667777643 333344455443 233221
Q ss_pred hcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHH--HHHHHHHHHHHhhccCCCCccchhHHH
Q 013318 278 FTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA--IAQVVVFLWILINYSVTSGVLGTLYPL 355 (445)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (445)
+- .+..++-....-|.+-+...+.++++++..|++..+..+...+ ..+. ++.+.++ .++.+.++ .++.+
T Consensus 274 W~-~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l-~l~~~S~l~a~~L--~lm~~t~~-----Iwv~Y 344 (412)
T PF01770_consen 274 WD-TVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGEL-ALGVFSLLQAGLL--FLMSFTGN-----IWVCY 344 (412)
T ss_pred HH-hcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHH-HHHHHHHHHHHHH--HHHHHhhH-----HHHHH
Confidence 11 1111122223457777888888888899999985544433222 2222 2222222 23344433 35677
Q ss_pred HHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHH
Q 013318 356 IMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQC 396 (445)
Q Consensus 356 ~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~ 396 (445)
+.+++++.......+....-++....+++ +-.||+.++...
T Consensus 345 ~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al 386 (412)
T PF01770_consen 345 AGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVAL 386 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHH
Confidence 88888887776666666666666554443 336787766543
No 162
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.79 E-value=6.9e-08 Score=96.01 Aligned_cols=146 Identities=12% Similarity=-0.024 Sum_probs=101.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHH
Q 013318 256 RMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF 335 (445)
Q Consensus 256 ~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~ 335 (445)
.++.+....+..+...+.....+|.+..+.+.+..++|.+.+.+.++..+++++.|+++||+|||+. +..+.++..++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~-~~~~~~~~~~~~ 85 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRS-YYLASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 3444444444455444444444554444445566689999999999999999999999999999874 456666655544
Q ss_pred HHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcch
Q 013318 336 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 409 (445)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~~ 409 (445)
.. ..+.++ +..+++..++.|++.+...+...+.+.+..+++ ++.+++.++....+|..+|..+.+..
T Consensus 86 ~~--~~~~~~-----~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 86 AG--LGLMVG-----FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HH--HHHhcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 32 234433 245667788899998888887777777777654 45688988888888888887776543
No 163
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.77 E-value=7.5e-08 Score=98.73 Aligned_cols=137 Identities=16% Similarity=0.099 Sum_probs=99.1
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+.+.++.+.+.+.+.++.+++.++.|++.||+|||+. +..+.++..++.+ .....++ ...+++..++.|++.
T Consensus 33 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~--~~~~~~~-----~~~l~~~~~~~G~~~ 104 (485)
T TIGR00711 33 GSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRL-FLISTFAFTLGSL--LCGVAPN-----LELMIIFRVIQGFGG 104 (485)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHH-HHHHHHHHHHHHH--HHhCcCC-----HHHHHHHHHHHHhhh
Confidence 4455678899999999999999999999999999874 4566666555433 2233333 245667788899999
Q ss_pred hhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGIL 430 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~~ 430 (445)
+...+..++++.+.+|++ ++.+.++++....+|..+++.+.+. .++.+.+++...+.++..+...
T Consensus 105 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 174 (485)
T TIGR00711 105 GPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAF 174 (485)
T ss_pred hhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHH
Confidence 999999999999999865 4457888888888888777666543 3556666666555555444433
No 164
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.77 E-value=1.3e-07 Score=94.55 Aligned_cols=124 Identities=14% Similarity=0.086 Sum_probs=92.0
Q ss_pred HHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCc
Q 013318 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHE 151 (445)
Q Consensus 73 ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~ 151 (445)
.++.+..|++.||+|+|+.+..+..+..+..+.. ..++...+++.+++.|++.+...+...+++.+.. +
T Consensus 272 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~ 341 (408)
T PRK09874 272 LLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS----------S 341 (408)
T ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC----------C
Confidence 4556678899999999999998877655544432 4566777778899999999998888777776554 4
Q ss_pred cchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHh
Q 013318 152 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCF 218 (445)
Q Consensus 152 ~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~ 218 (445)
+++||+.+|++.....+|..+|+++++.+... .+|+ ..|.+.+++.+++.++.++
T Consensus 342 ~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~-----------~g~~-~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 342 NQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN-----------YGFR-AVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred cccceeeehHHHHHHHHHHHhhHHHHHHHHhh-----------cchh-HHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999998877533 2344 3455666666666555443
No 165
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.77 E-value=1.8e-07 Score=93.73 Aligned_cols=159 Identities=11% Similarity=-0.027 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCC-----CCccchHhHHHHHHHHHHHH
Q 013318 263 LFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIVSGGAIAQVVVFLW 337 (445)
Q Consensus 263 ~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~-----g~~~~~i~~g~~~~~~~~~~ 337 (445)
+++.+|+..++.....|.++++++++.+++|++....-. .+.++++|+++||+ |||+.++..+.++..+++..
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~ 84 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAA 84 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHH
Confidence 355677777777777888888888888999987655444 58889999999999 78776666666665554432
Q ss_pred HHhhcc-CCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhh----c-chh
Q 013318 338 ILINYS-VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG----P-YIS 410 (445)
Q Consensus 338 ~~~~~~-~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~----~-~~~ 410 (445)
+ .+. +..+ ...+++..++.+++.+...+...+++.+.+|++++ .+.++......+|..++..+. + ..+
T Consensus 85 l--~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g 159 (402)
T PRK11902 85 M--AFCPPHAA---LWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG 159 (402)
T ss_pred H--HhcCccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC
Confidence 2 232 2222 23345555667777888888889999999987744 466766666666665554332 2 235
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013318 411 LQAMLIVMVVGICVALVG 428 (445)
Q Consensus 411 ~~~~~~i~~~~~~~~~~~ 428 (445)
....+.+.+++.++....
T Consensus 160 w~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 160 WGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666777766665554443
No 166
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.76 E-value=2.5e-07 Score=93.23 Aligned_cols=130 Identities=15% Similarity=0.114 Sum_probs=92.3
Q ss_pred HHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccC
Q 013318 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (445)
Q Consensus 70 ~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~ 148 (445)
...+++.++.|++.||+|+|+.+..+.++.++..... +.++...++..+++.|++.+...+....++.+..
T Consensus 273 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-------- 344 (420)
T PRK09528 273 FLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNF-------- 344 (420)
T ss_pred HHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------
Confidence 3456788899999999999999998888776654443 5677777888899999999888777777777776
Q ss_pred CCccchhhhhhhH-HHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHH-hccC
Q 013318 149 LHEGTVIGSFNGE-FWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMC-FLRK 221 (445)
Q Consensus 149 ~~~~~~rg~~~g~-~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~-~l~~ 221 (445)
+++.++...+. ++....+|.++|+++.+.+... .||+ ..|.+.+++.++..++.+ ++++
T Consensus 345 --~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~-----------~G~~-~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 345 --DVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS-----------IGFQ-GTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred --CccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh-----------hCch-HHHHHHHHHHHHHHHHHHHHhcC
Confidence 35667776554 5566788999999888776543 2454 345555555554444443 3443
No 167
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.75 E-value=3.3e-07 Score=95.45 Aligned_cols=196 Identities=16% Similarity=0.159 Sum_probs=115.8
Q ss_pred hhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCcccccc-
Q 013318 111 WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAA- 189 (445)
Q Consensus 111 ~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~- 189 (445)
+..++++-++.|+|+.++++-.-+|+.|+. .+++-..++|+.+++..+|+++|-+++...++...+=+.
T Consensus 237 ~llff~~q~l~GIG~Tpi~tlGisYiDDnv----------k~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~ 306 (735)
T KOG3626|consen 237 FLLFFLGQLLLGIGATPIFTLGISYIDDNV----------KKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLS 306 (735)
T ss_pred HHHHHHHHHHhhcCCCCCccCCCccccccc----------cccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccC
Confidence 346677899999999999999999999997 356788999999999999999999998877654321100
Q ss_pred ----cc-CC-CCC-cchhHHHHHHHHHHHHHHHHHhccCCcccC-------cc----cccc---cchhhhhHHHHHHHHH
Q 013318 190 ----LL-GG-STS-GTTLLFIVFLGVITLGTILMCFLRKEEDKG-------EK----ETAD---ASVNFYSYLVSLSKSI 248 (445)
Q Consensus 190 ----~~-~~-~~~-w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~-------~~----~~~~---~~~~~~~~~~~~~~~~ 248 (445)
++ +. +.| || .=|++.+.+.++..+.++++|+..++. +. +.++ .+.......++-++.+
T Consensus 307 ~~~it~~DPrWIGAWW-lGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~ 385 (735)
T KOG3626|consen 307 PIGITPTDPRWIGAWW-LGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSI 385 (735)
T ss_pred CCCCCCCCcchhhHHH-HHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHH
Confidence 00 00 012 32 334455555555555556777532211 00 0000 0001122445666778
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccccccccc--hhHHHHHHHHH-HHHHHHhhhhccccCCC
Q 013318 249 TTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGA-FDAICSLAAGRLTTGLP 318 (445)
Q Consensus 249 ~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~--~~g~~~~~~~i-~~~~g~~~~G~l~d~~g 318 (445)
+++++||-+..........-....-+.+..|+++ ++.++.+ .+-+++...++ +..+|-+++|++.+|+.
T Consensus 386 ~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyL-E~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 386 KRLLSNPIFMLVVLASVIESLAITGYITFLPKYL-ETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHH-HHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeec
Confidence 8899999887665433222211112224455553 5555543 44444433333 33467778899998874
No 168
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.73 E-value=5.9e-07 Score=91.11 Aligned_cols=140 Identities=9% Similarity=0.070 Sum_probs=93.7
Q ss_pred ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhh
Q 013318 284 TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 363 (445)
Q Consensus 284 ~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 363 (445)
+.+++.++.+...+.+.++..+++++.|+++||+|||+. +..+.++..++... ....++... ....+++..++.|+
T Consensus 55 ~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~-~~~~~~~~~~~~~~--~~~~~~~~~-~~~~l~~~~~l~g~ 130 (438)
T TIGR00712 55 EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVF-LPAGLILSAAVMLL--MGFVPWATS-SIAIMFVLLFLNGW 130 (438)
T ss_pred HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCcee-hHHHHHHHHHHHHH--Hhccccccc-hHHHHHHHHHHHHH
Confidence 345666788999999999999999999999999998874 45666555544321 122221100 02334555667888
Q ss_pred hhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhh-----cchhHHHHHHHHHHHHHHHHH
Q 013318 364 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG-----PYISLQAMLIVMVVGICVALV 427 (445)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~-----~~~~~~~~~~i~~~~~~~~~~ 427 (445)
+.+...+.....+.+.+|++ ++.+.|+++....+|..++..+. ...++.+.+++.+++.++..+
T Consensus 131 ~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~ 200 (438)
T TIGR00712 131 FQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVAL 200 (438)
T ss_pred HhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 88877777788888999765 55688998888887776654332 223556667776666555443
No 169
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.73 E-value=1.8e-07 Score=93.70 Aligned_cols=136 Identities=15% Similarity=0.136 Sum_probs=93.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+.+.++.+.....+.++..+++++.|+++||+|||+ ++..+..+..++.+. ..+.++ ...+++..++.|++.
T Consensus 44 ~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~--~~~~~~-----~~~l~~~~~l~G~~~ 115 (406)
T PRK15402 44 NAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRP-VMLAGVAFFILTCLA--ILLAQS-----IEQFTLLRFLQGIGL 115 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHH--HHHHcc-----HHHHHHHHHHHHhHh
Confidence 344457788888999999999999999999999987 445665555544332 233332 245566778889988
Q ss_pred hhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGI 429 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~~i~~~~~~~~~~~~ 429 (445)
+...+..++.+.|.+|++++ .+.+.......+|..+++.+.+ ..++.+.+++.+++.+++.+..
T Consensus 116 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK15402 116 CFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGL 184 (406)
T ss_pred hhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 88888888999999987755 3567666666666666655543 3355666766666665555443
No 170
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.73 E-value=2.5e-07 Score=93.14 Aligned_cols=135 Identities=14% Similarity=0.128 Sum_probs=94.4
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhh
Q 013318 287 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 366 (445)
Q Consensus 287 ~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 366 (445)
.+.+..+...+.+.++.++++++.|+++||+|||+ ++..+.++..++.+ ...+.++ ...+++.-++.|++.+
T Consensus 48 ~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~--~~~~a~~-----~~~l~~~r~l~Gi~~~ 119 (413)
T PRK15403 48 ADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRP-VLITGALIFTLACA--ATLFTTS-----MTQFLIARFIQGTSIC 119 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchH-HHHHHHHHHHHHHH--HHHHcCC-----HHHHHHHHHHHHHHHH
Confidence 34456777788889999999999999999999987 44566665555433 2233433 2456677788888887
Q ss_pred hhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHHHHHHHHHHHHH
Q 013318 367 VLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGI 429 (445)
Q Consensus 367 ~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~~i~~~~~~~~~~~~ 429 (445)
...+..++++.|.+|++++ .+.+.++....+|..+|+.+.+ ..++.+.+++.++..+++.+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~ 187 (413)
T PRK15403 120 FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGL 187 (413)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 6666677888899987654 4678777777777777665554 3466777777777666665443
No 171
>PRK11043 putative transporter; Provisional
Probab=98.72 E-value=2.5e-07 Score=92.59 Aligned_cols=138 Identities=15% Similarity=0.106 Sum_probs=93.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+.+.++++...+.+.++..+++++.|+++||+|||+. +..+.++..++.. ...+.++ ...+++..++.|++.
T Consensus 37 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~--~~~~~~~-----~~~l~~~~~l~G~~~ 108 (401)
T PRK11043 37 QTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPV-LLAGLSLFALGSL--GMLWVES-----AAQLLVLRFVQAVGV 108 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHH-HHHHHHHHHHHHH--HHHHhcC-----HHHHHHHHHHHHhhh
Confidence 4556688999999999999999999999999999874 4566555544432 2233332 244556667788887
Q ss_pred hhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
+...+...+++.+.+|++++ .+++..+....+|..+++.+.+ ..++++.+++..++.++..+...+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 109 CSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 77777777889999987754 4667666666666666554443 345666676666655555544433
No 172
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.72 E-value=2.7e-07 Score=92.10 Aligned_cols=141 Identities=16% Similarity=0.110 Sum_probs=93.1
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHH
Q 013318 276 AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPL 355 (445)
Q Consensus 276 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (445)
+.++....+.+.+..+.+...+.+.++..+++++.|+++||+|||+. +..+.++..++.+. ....++ ...++
T Consensus 29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~-~~~~~~~~~~~~~~--~~~~~~-----~~~l~ 100 (394)
T PRK11652 29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPV-ILVGMSIFILGTLV--ALFAHS-----LTVLI 100 (394)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH-HHHHHHHHHHHHHH--HHHHcc-----HHHHH
Confidence 33443323345556678999999999999999999999999999874 45665555544321 223322 24566
Q ss_pred HHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHH
Q 013318 356 IMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICV 424 (445)
Q Consensus 356 ~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~ 424 (445)
+..++.|++.+...+...++..+.+++++ +.+.+.++....++..+++.+.+. .++.+.+++.++..++
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~ 174 (394)
T PRK11652 101 AASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAG 174 (394)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 67788888888777777788888887554 446777777777776666555433 3455566665554443
No 173
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.71 E-value=2.9e-07 Score=94.90 Aligned_cols=158 Identities=14% Similarity=0.064 Sum_probs=104.7
Q ss_pred HHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCC
Q 013318 266 YSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT 345 (445)
Q Consensus 266 ~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~ 345 (445)
...+..+......|....+-+.+.++.+.+...+.++..++.++.|+++||+|||+ ++..+.++..++.+. ....++
T Consensus 17 ~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~-~l~~~~~~~~~~~~~--~~~a~~ 93 (495)
T PRK14995 17 PVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKR-LLMLGGTLFGLASLA--AAFSPT 93 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHH--HHHcCC
Confidence 33333333333344332222334456788888999999999999999999999987 445666665555432 233433
Q ss_pred CCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhc-cCC-chhhHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHHH
Q 013318 346 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILF-KHD-TEGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMV 419 (445)
Q Consensus 346 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~-~~~-~~~a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~~i~~ 419 (445)
...+++.-++.|++.+...+....++.+.+ |++ ++.++|++.....+|..+|+.+.+ ..++++.+++..
T Consensus 94 -----~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~ 168 (495)
T PRK14995 94 -----ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINV 168 (495)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHH
Confidence 245667778899999888887777777776 433 445788888888888777766654 446788888877
Q ss_pred HHHHHHHHHHHH
Q 013318 420 VGICVALVGILF 431 (445)
Q Consensus 420 ~~~~~~~~~~~~ 431 (445)
.++++..+...+
T Consensus 169 ~~~~~~~~l~~~ 180 (495)
T PRK14995 169 PIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHH
Confidence 666665554443
No 174
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.71 E-value=9.9e-08 Score=94.24 Aligned_cols=136 Identities=13% Similarity=0.015 Sum_probs=98.8
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+.+..+.+++.+.+.++..+++++.|++.||+|||+.+ ..+.++..++.. ...+.++ +..+++..++.|++.
T Consensus 25 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~-~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~l~g~~~ 96 (399)
T TIGR00893 25 GLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL-AVFIVIWGVFTG--LQAFAGA-----YVSLYILRVLLGAAE 96 (399)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee-HHHHHHHHHHHH--HHHHHcC-----HHHHHHHHHHHHHHH
Confidence 45556789999999999999999999999999998754 556555444432 2233332 345677788999999
Q ss_pred hhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGI 429 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~ 429 (445)
+...+..++++.|.+|++ ++.+++..+....+|..++..+.+. .++.+.+.+.++..++..+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 165 (399)
T TIGR00893 97 APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLW 165 (399)
T ss_pred HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHh
Confidence 999999999999999876 4457888888888888877666543 355666666655555544433
No 175
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.70 E-value=8.8e-07 Score=88.11 Aligned_cols=145 Identities=8% Similarity=0.034 Sum_probs=93.1
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHH----HHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYT----SFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~ 103 (445)
++++.+.+..++....+.......+...+|.+.+....+.... ...+.+++.|++.||+|+|+.+..+.....+..
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRW 284 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 3344443433333333322223333333344544433333333 334456778999999999999998887766544
Q ss_pred HH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHH-HHHHHhhhhhhHHHHHhh
Q 013318 104 AA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAVL 181 (445)
Q Consensus 104 ~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~-~~~~lg~~iG~li~~~l~ 181 (445)
.. ...++.+.+++..++.|++.+..++....++.+. +++++++..+.+. .....|..+|+.+++.+.
T Consensus 285 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~ 353 (382)
T PRK11128 285 GLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-----------PGSEVIRLQALYSALAMGGSIAIMTVLSGFLY 353 (382)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 3567777778889999999999888877776654 2456788888876 445667789999888876
Q ss_pred cC
Q 013318 182 KD 183 (445)
Q Consensus 182 ~~ 183 (445)
..
T Consensus 354 ~~ 355 (382)
T PRK11128 354 QH 355 (382)
T ss_pred Hh
Confidence 44
No 176
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.70 E-value=3.4e-07 Score=88.93 Aligned_cols=177 Identities=12% Similarity=0.124 Sum_probs=118.1
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhhhcc-CCCCchHHHHHHHH----HHHHhhhhHHHHHHHhCcchhhhhhhHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTISLGILYT----SFTCFSLVASLVVRVLGSKNALILGTTGY 99 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~-~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr~G~k~~l~~g~~~~ 99 (445)
+.++|+++.-++-+++-.+-++...+...... +.+++...+..+-. .-+.++++.|++.||+|.|+++.++.+++
T Consensus 249 ~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~ 328 (438)
T COG2270 249 RGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVIL 328 (438)
T ss_pred hcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHH
Confidence 44557766655555544444444444444443 56777665333222 33568899999999999999999999877
Q ss_pred HHHHHH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHH
Q 013318 100 WLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (445)
Q Consensus 100 ~~~~~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~ 178 (445)
.+..+. .+...-..+.+...+.|...|+.+...-+|.++.. |++|-++++|+|...-..+...||.+-.
T Consensus 329 ~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lv----------p~~k~~~fFglyaltgra~S~~gp~lv~ 398 (438)
T COG2270 329 SIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLV----------PKGKEGRFFGLYALTGRAASFLGPFLVA 398 (438)
T ss_pred HHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhC----------CCccccceeehhhhhhhHHHHHHHHHHH
Confidence 665543 33334444555779999999999999999999998 5678899999999988999999997765
Q ss_pred HhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCC
Q 013318 179 AVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 222 (445)
Q Consensus 179 ~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~ 222 (445)
.+.+..+ +-|.- +....++..++.++.+++|++
T Consensus 399 v~t~iTg----------~~r~g-~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 399 VITQITG----------SSRAG-VLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHhc----------chhhH-HHHHHHHHHhhHhhEEeecCC
Confidence 5543332 12322 223334445565555566654
No 177
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.68 E-value=1.1e-06 Score=89.41 Aligned_cols=139 Identities=12% Similarity=0.110 Sum_probs=92.3
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccC--CCCccchhHHHHHHH
Q 013318 282 IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV--TSGVLGTLYPLIMAA 359 (445)
Q Consensus 282 ~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 359 (445)
+.+++++.++.|+..+...++.++++++.|+++||+|+|+ ++..+.++..++.+. ..+.+ +.+ ....++..+
T Consensus 55 l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~-~l~~~~~~~~i~~~~--~~~~~~~~~~---~~~~~~~~~ 128 (452)
T PRK11273 55 LVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV-FLPAGLILAAAVMLF--MGFVPWATSS---IAVMFVLLF 128 (452)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCch-hHHHHHHHHHHHHHH--HHhhhccccc---HHHHHHHHH
Confidence 3334666778999999999999999999999999999987 445666555444321 22221 111 234556667
Q ss_pred HHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHH-HHHHhh----cchhHHHHHHHHHHHHHHHH
Q 013318 360 LLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIA-VVFFIG----PYISLQAMLIVMVVGICVAL 426 (445)
Q Consensus 360 l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~-ig~~i~----~~~~~~~~~~i~~~~~~~~~ 426 (445)
+.|++.+...+...+.+.+.+|++ ++.+.|+++....+|.. .++.+. ...++.+.+++.+++.++..
T Consensus 129 l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~ 201 (452)
T PRK11273 129 LCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVA 201 (452)
T ss_pred HHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 888888877777777888888766 45588888888877753 344332 12255666776665555443
No 178
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.67 E-value=5e-07 Score=90.56 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=81.0
Q ss_pred ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHH-HhhccCCCCccchhHHHHHHHHHh
Q 013318 284 TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLG 362 (445)
Q Consensus 284 ~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~G 362 (445)
+.+.+.+++|+..+.+.++..+++++.|++.||+|||+. +..+.++..++.+.. ....... + +..+++..++.|
T Consensus 42 ~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~-l~~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~~~i~G 116 (402)
T TIGR00897 42 ALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKT-MMIGLLLWCVGHAAFIVFGLGHA-N---YPLILLFYGIRG 116 (402)
T ss_pred HhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH-HHHHHHHHHHHHHHHHHHhccCc-c---HHHHHHHHHHHH
Confidence 345666789999999999999999999999999999884 456665555443211 1112111 1 234556677788
Q ss_pred hhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHH-HHHHHhh
Q 013318 363 IGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASI-AVVFFIG 406 (445)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~-~ig~~i~ 406 (445)
++.+...+...+.+.+.+|++ ++.+.|.++...++|. .++..+.
T Consensus 117 ~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~ 162 (402)
T TIGR00897 117 LGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYS 162 (402)
T ss_pred cchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887776666677777877655 5568898888888775 3555544
No 179
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.67 E-value=1.7e-07 Score=93.73 Aligned_cols=175 Identities=9% Similarity=0.065 Sum_probs=99.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHH
Q 013318 254 DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV 332 (445)
Q Consensus 254 ~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~ 332 (445)
||.++.+....++.....+.+.+.++.++.+ .+++..++|.+.+.+.++..+++++.|+++||+|||+.++ .+.+...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~ 79 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLL-WIISGLL 79 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-HHHHHHH
Confidence 3555555443333333223333444444432 3566678999999999999999999999999999988543 3333322
Q ss_pred HHHHH-HHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcch--
Q 013318 333 VVFLW-ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI-- 409 (445)
Q Consensus 333 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~~-- 409 (445)
+.... ....+.+..........++..++.|++.+...+...++..+..+ +++..+|..+...++|.++|..+.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 158 (396)
T TIGR00882 80 VLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR-NSNFEYGKARMFGCVGWALCASIAGILFS 158 (396)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh-hcccccchhhhhcccHHHHHHHHHhhhhc
Confidence 22111 01111111000001123344566777777777766666666433 233366777777778877777666432
Q ss_pred -hHHHHHHHHHHHHHHHHHHHH
Q 013318 410 -SLQAMLIVMVVGICVALVGIL 430 (445)
Q Consensus 410 -~~~~~~~i~~~~~~~~~~~~~ 430 (445)
+....+++.+++.++..+..+
T Consensus 159 ~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 159 IDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred cCchHHHHHHHHHHHHHHHHHH
Confidence 556667666655555444333
No 180
>PRK10133 L-fucose transporter; Provisional
Probab=98.66 E-value=8.4e-07 Score=90.00 Aligned_cols=115 Identities=13% Similarity=0.075 Sum_probs=87.1
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHH-hhccCCCCccchhHHHHHHHHHhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSGVLGTLYPLIMAALLGIG 364 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~G~~ 364 (445)
+++.++.|+....+.++..+++++.|++.||+|||+ ++..+.++..++.++.. ....++ +..+++..++.|++
T Consensus 57 ~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~-~l~~g~~~~~~~~~l~~~~~~a~~-----~~~ll~~r~l~G~g 130 (438)
T PRK10133 57 TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKA-GIITGLFLYALGAALFWPAAEIMN-----YTLFLVGLFIIAAG 130 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHH
Confidence 455668899999999999999999999999999997 45677777666543211 122222 34567788899999
Q ss_pred hhhhhhhhhHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhh
Q 013318 365 DGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 365 ~~~~~~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~ 406 (445)
.+...+..++++.+..|++++. ..+.++....+|..++..+.
T Consensus 131 ~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 131 LGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988876666554 57888888888888776554
No 181
>TIGR00898 2A0119 cation transport protein.
Probab=98.66 E-value=7.6e-07 Score=91.96 Aligned_cols=128 Identities=14% Similarity=0.066 Sum_probs=88.6
Q ss_pred HHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcch--hhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccC
Q 013318 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSW--YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (445)
Q Consensus 72 ~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~--~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~ 148 (445)
...+.++.+++.||+|||+++.++.++.++..+.. ..++. ...+..-++.+++.+..++....+.+|..
T Consensus 368 ~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-------- 439 (505)
T TIGR00898 368 ELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY-------- 439 (505)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc--------
Confidence 34577889999999999999999887665544432 33322 33344556677777777777778888876
Q ss_pred CCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCc
Q 013318 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 223 (445)
Q Consensus 149 ~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~ 223 (445)
|++.|++++|+......+|.++||.+.. +.... + ...+.+++++.+++.++.+++||++
T Consensus 440 --p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~------------~-~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 440 --PTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKW------------L-FLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred --cHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHH------------H-hhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 4678999999999999999999998776 32211 1 2235556666666655566777644
No 182
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.66 E-value=7.9e-07 Score=90.98 Aligned_cols=181 Identities=13% Similarity=0.010 Sum_probs=102.8
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhh-ccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTV-NTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i-~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~ 102 (445)
++++.+.+..++.+..+.......|.. .++.+++... .+.......++.++.|++.||+|+|+.+..+.....+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALII 337 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 345666666666666655555555543 3445555433 23334456678899999999999999877654433322
Q ss_pred HH--Hh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHH-hhhhhhHHHH
Q 013318 103 VA--AN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS-HQFVGNLITL 178 (445)
Q Consensus 103 ~~--~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~l-g~~iG~li~~ 178 (445)
.. .. ..++...+++.+++.|+.........+....+.. |+++||.+.|+.....++ |..+++.+.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~----------p~~~~g~a~gi~~~~g~l~g~~~~~~~~G 407 (467)
T PRK09556 338 FTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFV----------PKKAIGVANGIKGTFAYLFGDSFAKVGLG 407 (467)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhc----------chhhHHHHHHHHHHHHHHHhHHHHhhhHH
Confidence 11 11 2245555556777777644322222234444554 567899999999887776 6688887776
Q ss_pred HhhcCccccccc-c-CCCCCcchhHHHHHHHHHHHHHHHHHhcc
Q 013318 179 AVLKDDKVCAAL-L-GGSTSGTTLLFIVFLGVITLGTILMCFLR 220 (445)
Q Consensus 179 ~l~~~~~~~~~~-~-~~~~~w~~~~~~i~~~l~~~~~~l~~~l~ 220 (445)
.+..... +|.. + ....+|+. .|.+..++.+++.+..+++.
T Consensus 408 ~i~~~~~-~g~~~~~~~~~~~~~-~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 408 MIADPTK-NGTPIFGYTLTGWAG-TFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHhcccc-cccccccccccChHH-HHHHHHHHHHHHHHHHHHHH
Confidence 6654100 0000 0 00235643 45555556666665555553
No 183
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.66 E-value=9.8e-07 Score=90.87 Aligned_cols=175 Identities=10% Similarity=0.067 Sum_probs=110.9
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCC-----CCccchH
Q 013318 250 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIV 324 (445)
Q Consensus 250 ~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~-----g~~~~~i 324 (445)
+..++||...+..+.+.+|.......+..+..+.+.+.+.+++|... ..+... ++++++|.++||+ |||+.++
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~-~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~l 84 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFS-LVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWL 84 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH-HHHHHH-HHHHHHHHHHHcccccCCCCchHHH
Confidence 34456777666666777777665554555555555566666777752 222222 6889999999998 8887656
Q ss_pred hHHHHHHHHHHHHHHhhcc-CCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHH
Q 013318 325 SGGAIAQVVVFLWILINYS-VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVV 402 (445)
Q Consensus 325 ~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig 402 (445)
..+.+...++... +.+. +..+ ...+....++.+++.+...+...++..|.+|++ ++.+.++......+|..++
T Consensus 85 l~~~i~~~~~~~~--~a~~~~~~~---l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg 159 (491)
T PRK11010 85 LATQLLLLVAIAA--MGFLEPGTQ---LRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVS 159 (491)
T ss_pred HHHHHHHHHHHHH--HHHcCCcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHH
Confidence 5665555444322 2222 2222 234555677778888888888889999999855 4446777777777776665
Q ss_pred HHhh----c-chhHHHHHHHHHHHHHHHHHHHHH
Q 013318 403 FFIG----P-YISLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 403 ~~i~----~-~~~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
..+. . ..++...+++.+++.++..+..++
T Consensus 160 ~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 160 GGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 4332 3 346777777777766665554443
No 184
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.64 E-value=3.5e-07 Score=92.95 Aligned_cols=136 Identities=15% Similarity=0.120 Sum_probs=97.3
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhh
Q 013318 289 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 368 (445)
Q Consensus 289 ~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 368 (445)
..+.+.+.+.+.++..+++++.|+++||+|||+. +..+.++..++.++ ....++.. ....+++..++.|++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~-~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~r~l~G~~~~~~ 144 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS-LLIIALLFVIGAIL--MGLAAFAL--SVEMLIVGRVLLGIGVGIA 144 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH-HHHHHHHHHHHHHH--HHHhcccc--chHHHHHHHHHHHhhhhHH
Confidence 5678899999999999999999999999999874 45555555444322 11222211 0235667888899999999
Q ss_pred hhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhh---c----chhHHHHHHHHHHHHHHHHHHH
Q 013318 369 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIG---P----YISLQAMLIVMVVGICVALVGI 429 (445)
Q Consensus 369 ~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~---~----~~~~~~~~~i~~~~~~~~~~~~ 429 (445)
.+...+++++.+|+++ +.+.++++....+|..+++.+. . ..++.+.+.+.+...++..+..
T Consensus 145 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 145 SALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGL 213 (481)
T ss_pred HhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 8888999999998764 4578898888889988888776 2 3456666766555544444433
No 185
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.64 E-value=5.7e-07 Score=91.26 Aligned_cols=167 Identities=13% Similarity=0.120 Sum_probs=103.4
Q ss_pred HHHHHHHHHH--HHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhcccc----CCCCccchHhHHHHHHHHHHHH
Q 013318 264 FAYSGLQQAF--VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTT----GLPSITFIVSGGAIAQVVVFLW 337 (445)
Q Consensus 264 ~~~~g~~~~f--~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d----~~g~~~~~i~~g~~~~~~~~~~ 337 (445)
....|++.++ ..+..++++.+-+.+...++.+.....+..++.+++.|+++| |+|||++++..+.....+++.
T Consensus 11 ~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~- 89 (477)
T TIGR01301 11 SVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVI- 89 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHH-
Confidence 3445555433 223333333333455567888888999999999999999999 599999876666655555543
Q ss_pred HHhhccCCCC----------ccch--hHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch---hhHHHHHHHHHHHHHHH
Q 013318 338 ILINYSVTSG----------VLGT--LYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE---GAFAQLKVWQCASIAVV 402 (445)
Q Consensus 338 ~~~~~~~~~~----------~~~~--~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~---~a~~~~~~~~~~g~~ig 402 (445)
++.+.++.. .... ....+...++.++....++...++++|+.|++++ .++++.+....+|..+|
T Consensus 90 -ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg 168 (477)
T TIGR01301 90 -LIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLG 168 (477)
T ss_pred -HHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 223332210 0000 1122333344556666777778999999997643 37888888888888887
Q ss_pred HHhhcch-------------------hHHHHHHHHHHHHHHHHHHHHHH
Q 013318 403 FFIGPYI-------------------SLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 403 ~~i~~~~-------------------~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
+.+.... ++...|++.+++++++.....+.
T Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 169 YAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred HHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 7654321 45666777666666666555443
No 186
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.63 E-value=2.4e-05 Score=71.53 Aligned_cols=320 Identities=14% Similarity=0.082 Sum_probs=154.0
Q ss_pred HhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhhhcchhhHHhHHHHhhhhhHHhhhhh-hhHHHHhhhhhhhccCCCcc
Q 013318 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGE-GTYLTAAALSHASNHKLHEG 152 (445)
Q Consensus 74 i~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~~~~~~~li~~r~l~Gig~g~~~~~~-~~~i~~~~~~~~~~~~~~~~ 152 (445)
+...+.|.+.||.|||+..+.-++.|.+..+.--.|.+-.++++|++.|+..+.++.+. .-+++|+-+
T Consensus 87 LFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne----------- 155 (454)
T KOG4332|consen 87 LFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE----------- 155 (454)
T ss_pred HHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh-----------
Confidence 44567889999999999776555444333333346889999999999999999998884 345555532
Q ss_pred chhhhhhhHHHHH--------HHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCcc
Q 013318 153 TVIGSFNGEFWGM--------FASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 224 (445)
Q Consensus 153 ~~rg~~~g~~~~~--------~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~ 224 (445)
+|+.---+.... ..+=.++.++.+..+..... .|.-. .|-... +++++...+.+++=.+
T Consensus 156 -kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~s---------lGPVA-PFdAAa--cfLaigmAvil~~W~E 222 (454)
T KOG4332|consen 156 -KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFS---------LGPVA-PFDAAA--CFLAIGMAVILSSWSE 222 (454)
T ss_pred -ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhc---------cCCCC-chHHHH--HHHHHHHHHHHhhhhh
Confidence 222111111111 11222223333322221111 12211 232222 2222222222332111
Q ss_pred cCcccccccchhhhhHHHHHHHH-HHHhhccchhHHHHHHH-HHHHHHHHHHHhhhcccccccccc--cc--hhHHHHHH
Q 013318 225 KGEKETADASVNFYSYLVSLSKS-ITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVTPALG--VS--GVGGAMAV 298 (445)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~~~-~~~g~~~~f~~~~~~~~~~~~~~~--~~--~~g~~~~~ 298 (445)
+- .|.+ ++++.....+. ...+..|+|+.++...- .+-|....|..-| +..++ .. .-|++++.
T Consensus 223 Ny-gdps-----~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLW------TPaLspn~e~iPhGfiFat 290 (454)
T KOG4332|consen 223 NY-GDPS-----ENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLW------TPALSPNDEEIPHGFIFAT 290 (454)
T ss_pred cc-CChh-----hhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeee------cccCCCCcccCCchhHHHH
Confidence 00 0000 01111111211 12245677776554321 1112111121111 22233 22 35788899
Q ss_pred HHHHHHHHHhhhhccccCCCCc-cchHhHHHHHHHHHHHH-HHhh-ccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHH
Q 013318 299 YGAFDAICSLAAGRLTTGLPSI-TFIVSGGAIAQVVVFLW-ILIN-YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSAL 375 (445)
Q Consensus 299 ~~i~~~~g~~~~G~l~d~~g~~-~~~i~~g~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 375 (445)
+-+++++|+-+..|+..|-..| .....+..+...+.+.+ ++.. ..|+.+ .+..-++.+.++-.+.+.++|.+.-+
T Consensus 291 FMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~ke--s~~~s~i~F~~~E~cvGlfwPSimkm 368 (454)
T KOG4332|consen 291 FMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKE--SPSESLIGFCLFEACVGLFWPSIMKM 368 (454)
T ss_pred HHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcC--CchHHHHHHHHHHHHHhhcchHHHHH
Confidence 9999999999988876654322 11222333332222211 1111 223322 13445677778888899999998888
Q ss_pred HHhhccCCch-hhHHHHHHHHHHHHHHHHHh--hc--chhHHHHHHHHHHHHHHHHHHHHH
Q 013318 376 LGILFKHDTE-GAFAQLKVWQCASIAVVFFI--GP--YISLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 376 l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i--~~--~~~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
=.+..|++.+ +++-.++.=...-.+++... .. -..-+.++.++-+....+.+....
T Consensus 369 RsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~ 429 (454)
T KOG4332|consen 369 RSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQRR 429 (454)
T ss_pred HHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHHHH
Confidence 8888887644 23333333223333333211 11 123456677766666666554433
No 187
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.63 E-value=3.9e-07 Score=93.47 Aligned_cols=137 Identities=11% Similarity=0.020 Sum_probs=88.9
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+++.++.+.+.+.+.++..++.++.|+++||+|||+. +..+.++..++.+ ...+.++ +..+++..++.|++.
T Consensus 67 gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~-~~~~~~~~~~~~~--~~~~~~s-----~~~l~~~r~l~G~~~ 138 (476)
T PLN00028 67 NLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYG-SAFLLMLTAPAVF--CMSLVSS-----ATGFIAVRFFIGFSL 138 (476)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-HHHHHHHHHHHHH--HHHHhcC-----HHHHHHHHHHHHHHH
Confidence 4555577888888889999999999999999999874 4455555444432 2233332 234555667788887
Q ss_pred hhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc-------------hhHHHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY-------------ISLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~-------------~~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
+...+ ...++++.+|++ ++.+.|+.+....+|..++..+.+. .++.+.+++.+++.++..+...+
T Consensus 139 ~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 139 ATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 76543 456788999865 5568888877766666555333221 24666777777666555444433
No 188
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.63 E-value=5.2e-09 Score=107.99 Aligned_cols=257 Identities=16% Similarity=0.105 Sum_probs=3.0
Q ss_pred hhhhhccCCCCchHHHHHHHHHHHHhhh----hHHHHHHHhCcchhhhhhhHHHHHHHHHhhhc----------------
Q 013318 50 LETTVNTEGNLGTISLGILYTSFTCFSL----VASLVVRVLGSKNALILGTTGYWLFVAANLFP---------------- 109 (445)
Q Consensus 50 ~~~~i~~~~~~g~~~~~~~~~~~ai~~l----~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~~~---------------- 109 (445)
..+++.+..++.....+.+..++=+++. +..++.+|-.|-|.+..|.++.++..+.+..|
T Consensus 25 ~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~ 104 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSN 104 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccc
Confidence 3445666678888877887777755554 45556666555556666665554433321100
Q ss_pred -----------------------------------chhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccch
Q 013318 110 -----------------------------------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTV 154 (445)
Q Consensus 110 -----------------------------------~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 154 (445)
-+..++++.+++|+|.+++|+..-+|+.|+. ++++
T Consensus 105 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv----------~~~~ 174 (539)
T PF03137_consen 105 GNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNV----------SKKN 174 (539)
T ss_dssp -----------------------------------------------SSS------------------------------
T ss_pred cccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccc----------cccc
Confidence 0456778999999999999999999999998 4677
Q ss_pred hhhhhhHHHHHHHHhhhhhhHHHHHhhcCc---cc-c----cccc-CC-CCC-cchhHHHHHHHHHHHHHHHHHhccCCc
Q 013318 155 IGSFNGEFWGMFASHQFVGNLITLAVLKDD---KV-C----AALL-GG-STS-GTTLLFIVFLGVITLGTILMCFLRKEE 223 (445)
Q Consensus 155 rg~~~g~~~~~~~lg~~iG~li~~~l~~~~---~~-~----~~~~-~~-~~~-w~~~~~~i~~~l~~~~~~l~~~l~~~~ 223 (445)
-+.+.|+.++...+|+++|-++++...... .. + +-.+ +. +.| || .-|++.+++.++..+.++++|+.-
T Consensus 175 splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWW-LGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 175 SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWW-LGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHH-HHHHHHHHHHHHHHHHHHcCCccC
Confidence 889999999999999999988887655321 10 0 0001 10 112 43 334444444444444344555321
Q ss_pred ccC-----cc-----ccc---ccchhh-------hhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhccccc
Q 013318 224 DKG-----EK-----ETA---DASVNF-------YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 283 (445)
Q Consensus 224 ~~~-----~~-----~~~---~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~ 283 (445)
+.. ++ +.+ +++..+ ....++.++..+++++||-+...........+...-+.+..|+++
T Consensus 254 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKyl- 332 (539)
T PF03137_consen 254 PGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYL- 332 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 111 00 000 000000 112344456677788888877665433222221111223345543
Q ss_pred cccccc--chhHHHHHH-HHHHHHHHHhhhhccccCCC
Q 013318 284 TPALGV--SGVGGAMAV-YGAFDAICSLAAGRLTTGLP 318 (445)
Q Consensus 284 ~~~~~~--~~~g~~~~~-~~i~~~~g~~~~G~l~d~~g 318 (445)
+..++. +...++... .-.+.++|.+++|.+.+|++
T Consensus 333 E~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~k 370 (539)
T PF03137_consen 333 ESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFK 370 (539)
T ss_dssp --------------------------------------
T ss_pred HHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEec
Confidence 444443 344444433 23355688888999998874
No 189
>TIGR00895 2A0115 benzoate transport.
Probab=98.62 E-value=5.5e-07 Score=89.27 Aligned_cols=140 Identities=11% Similarity=0.004 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh
Q 013318 31 HILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN 106 (445)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~ 106 (445)
+.+.+..++....+.......|.+.++.+.+... .+.......++.++.+++.||+|+|+.+..............
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 332 (398)
T TIGR00895 253 VLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVG 332 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 3333444443334333334444444444444332 233334456788899999999999954443332222222222
Q ss_pred -hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 107 -LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 107 -~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
..++....+...++.|++.+..++...+++.+.. |+++||+++|+......+|..+||.+.+.+
T Consensus 333 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 333 STLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFY----------PTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----------CHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 2455555666788999999998888888888886 567899999999999999999999887643
No 190
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.61 E-value=1.3e-07 Score=93.11 Aligned_cols=134 Identities=14% Similarity=0.115 Sum_probs=94.7
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+.+..+.|++.+...++..+++++.|+++||+|||+. +..+.++..++.++ ..+.++ ....++..++.|++.
T Consensus 26 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~g~~~ 97 (379)
T TIGR00881 26 GLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVF-LPIGLILCAIVNLF--FGFSTS-----LWVMAALWALNGIFQ 97 (379)
T ss_pred CCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeeh-hHHHHHHHHHHHHH--HHHhhh-----HHHHHHHHHHHHhhc
Confidence 4556678999999999999999999999999999874 45666655554332 233332 245667788889999
Q ss_pred hhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHH-Hhh----cchhHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVF-FIG----PYISLQAMLIVMVVGICVALV 427 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~-~i~----~~~~~~~~~~i~~~~~~~~~~ 427 (445)
+...+..++++.+.+|+++ +.+.++.+....+|..++. .+. ...+..+.+.+.+++.++..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (379)
T TIGR00881 98 GMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSL 165 (379)
T ss_pred cccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Confidence 9888999999999998764 4577877777777776665 232 333555666665555444433
No 191
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.61 E-value=6.8e-07 Score=87.96 Aligned_cols=113 Identities=17% Similarity=0.242 Sum_probs=79.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+++..+.+++.....++.++++++.|+++||+|||+. +..+.++..++.++ ..+.+. + +..+++..++.|++.
T Consensus 33 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~i~~~~--~~~~~~-~---~~~~~~~~~~~g~~~ 105 (366)
T TIGR00886 33 GLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYT-TTLSLLLLAIPCLW--AGLAVQ-S---YSVLLLLRLFIGIAG 105 (366)
T ss_pred CCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHH-HHHHHHHHHHHHHH--HHHHhh-h---HHHHHHHHHHHHHhc
Confidence 4555678899999999999999999999999999874 45666665555432 233331 1 245566677788886
Q ss_pred hhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhh
Q 013318 366 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
+.. +...+++++.+|++ ++.+.+++.....+|..++..+.
T Consensus 106 ~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 146 (366)
T TIGR00886 106 GSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVM 146 (366)
T ss_pred hhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHH
Confidence 654 45678889999865 45578888766666766655444
No 192
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.60 E-value=4.9e-07 Score=91.17 Aligned_cols=124 Identities=12% Similarity=-0.056 Sum_probs=90.4
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+.+..+.++..+.+.++..+++++.|++.||+|||+. +..+.++..++.+ ...+.++ ...+++..++.|++.
T Consensus 49 ~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~-l~~~~~~~~~~~~--~~~~~~~-----~~~l~~~r~l~G~g~ 120 (426)
T PRK12307 49 GLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPL-MMWSIVAYSVGTG--LSGLASG-----VIMLTLSRFIVGMGM 120 (426)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-HHHHHHHHHHHHH--HHHHHhH-----HHHHHHHHHHHHHHH
Confidence 3445578888889999999999999999999999874 4566665555433 1233332 245677788899999
Q ss_pred hhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIV 417 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i 417 (445)
+...+....++.|.+|+++ +.+.++++....+|..++..+.+. .++.+.+.+
T Consensus 121 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 121 AGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred hhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 9888888999999998774 457888888888887777655432 355555554
No 193
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.57 E-value=9.7e-07 Score=100.34 Aligned_cols=113 Identities=15% Similarity=0.082 Sum_probs=82.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHH-HhhccCCCCccchhHHHHHHHHHhhhhhhhh
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLGIGDGVLN 369 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 369 (445)
..+++.+++.++..+++++.|+++||+|||+. +..+.++..+..++. +....++ ...+++..++.|++.+...
T Consensus 48 ~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~-l~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~l~G~~~~~~~ 121 (1146)
T PRK08633 48 LTAIVNALFLLPFLLLSSPAGFLADKFSKNRV-IRIVKLFEVGLTLLIVLAYYLGW-----FWLAFAVTFLLGAQSAIYS 121 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhhHhhhcccccHHHH-HHHHHHHHHHHHHHHHHHHHHcc-----HHHHHHHHHHHHHHHHhhc
Confidence 45777888999999999999999999999874 445544433322211 1112221 2456777888999999999
Q ss_pred hhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcch
Q 013318 370 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 409 (445)
Q Consensus 370 ~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~~ 409 (445)
+..++++++.+|+++ +.++|++.....+|..+|..+.+.+
T Consensus 122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l 162 (1146)
T PRK08633 122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL 162 (1146)
T ss_pred hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998764 4588998888888888877666543
No 194
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.57 E-value=2.1e-06 Score=78.86 Aligned_cols=145 Identities=14% Similarity=0.134 Sum_probs=99.1
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhhhccC-CCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTE-GNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~-~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~ 99 (445)
.....++++.+.+++++.+......+.|.+..+ .+++..+ .+..|...++..++.|.++||+|++...+.+..+.
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~ 340 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACIL 340 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHH
Confidence 355567778788888888876666666665443 5665543 57778888889999999999999999988887654
Q ss_pred HHHH-HHhhhcchhhHHhHHHHhhhhhHH----hhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhh
Q 013318 100 WLFV-AANLFPSWYTMVPASLYLGFAASI----IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (445)
Q Consensus 100 ~~~~-~~~~~~~~~~li~~r~l~Gig~g~----~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~ 174 (445)
.+.. ...+.+-+. =+++-.++|...+. .||... ... ||++.|.+.|..++..++|..+-+
T Consensus 341 tl~~H~~l~Ft~ls-Py~~m~~lGLsysllAcslWP~va----~~v----------pE~qLGTaygf~qsIqNLgla~i~ 405 (459)
T KOG4686|consen 341 TLLGHSGLFFTFLS-PYTSMTFLGLSYSLLACSLWPCVA----SLV----------PEEQLGTAYGFIQSIQNLGLAFIP 405 (459)
T ss_pred HHHHhhhHHhhhcc-HHHHHHHHhhhHHHHHHHHhhhhh----hhC----------CHHHhcchHHHHHHHHhhhhhHHh
Confidence 3321 111111111 12244677776554 555543 333 567899999999999999999999
Q ss_pred HHHHHhhcCc
Q 013318 175 LITLAVLKDD 184 (445)
Q Consensus 175 li~~~l~~~~ 184 (445)
.++..+..+.
T Consensus 406 Iiag~i~d~~ 415 (459)
T KOG4686|consen 406 IIAGFIADGD 415 (459)
T ss_pred hhhheeecCC
Confidence 9888776443
No 195
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.56 E-value=7.3e-07 Score=87.64 Aligned_cols=114 Identities=17% Similarity=0.067 Sum_probs=84.6
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhh
Q 013318 285 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 364 (445)
Q Consensus 285 ~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 364 (445)
.+.+.++.|+..+.+.++..+++++.|+++||+|+|+. +..+.++..++.+ .. ..++ ...+++..++.|++
T Consensus 30 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~--~~-~~~~-----~~~l~~~~~~~g~g 100 (355)
T TIGR00896 30 LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERS-VAAGLLLIAAGIL--IR-SAPG-----TALLFAGTALIGVG 100 (355)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHH-HHHHHHHHHHHHH--HH-Hhcc-----HHHHHHHHHHHHHH
Confidence 34566688999999999999999999999999999874 4566555444432 12 2222 24456677788998
Q ss_pred hhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhc
Q 013318 365 DGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP 407 (445)
Q Consensus 365 ~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~ 407 (445)
.+...+..++++.+.+|++++.+.+.++..+.+|..++..+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 143 (355)
T TIGR00896 101 IAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATV 143 (355)
T ss_pred HHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887778888888988876667889888888888877665543
No 196
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.55 E-value=1.1e-06 Score=90.53 Aligned_cols=125 Identities=10% Similarity=-0.044 Sum_probs=89.8
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+++..+.+.....+.++.+++.++.|++.||+|||+. +..+.++..++.+ ...+.++ +..+++..++.|++.
T Consensus 51 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~--~~~~~~~-----~~~l~~~~~l~G~~~ 122 (496)
T PRK03893 51 GLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLA-MVISIVLFSVGTL--ACGFAPG-----YWTLFIARLVIGMGM 122 (496)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHH--HHHHHhH-----HHHHHHHHHHHHHHH
Confidence 4455578888888999999999999999999999874 4556555544433 2233322 245667788889998
Q ss_pred hhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVM 418 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~~i~ 418 (445)
+...+...+++.+.+|++++ .+.+.++....+|..+++.+.+ ..++.+.+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~ 180 (496)
T PRK03893 123 AGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIG 180 (496)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 88888888999999987644 5788888888888777765553 33555555543
No 197
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.55 E-value=3.5e-06 Score=85.03 Aligned_cols=111 Identities=8% Similarity=0.012 Sum_probs=77.3
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhcc-C--CCCccchhHHHHHHHHHh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYS-V--TSGVLGTLYPLIMAALLG 362 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~l~G 362 (445)
+++.++.++..+.+.++..++++..|++.||+|.|+.. ..+.++..+... +..+. + .++ +..++++.++.|
T Consensus 66 ~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~-~~~~ll~~i~~~--~~~~a~~~~~~s---~~~lli~r~l~G 139 (462)
T PRK15034 66 NFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT-VFSTAILIIPCV--WLGIAVQNPNTP---FGIFIVIALLCG 139 (462)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHHHH--HHHHHHcccCCC---HHHHHHHHHHHH
Confidence 45556789888999999999999999999999998744 455544443322 22222 1 112 456778888999
Q ss_pred hhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHH
Q 013318 363 IGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF 403 (445)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~ 403 (445)
++ +...+.....+++.+|++ ++.+.|++....++|..++.
T Consensus 140 ig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 140 FA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 97 556677888899999876 66688888655556655443
No 198
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.54 E-value=3.6e-06 Score=83.17 Aligned_cols=147 Identities=12% Similarity=0.080 Sum_probs=94.4
Q ss_pred hhccCCCCchHHHHHHHH----HHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHH-HHhhhcchhhHHhHHHHhhhhhHH
Q 013318 53 TVNTEGNLGTISLGILYT----SFTCFSLVASLVVRVLGSKNALILGTTGYWLFV-AANLFPSWYTMVPASLYLGFAASI 127 (445)
Q Consensus 53 ~i~~~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~-~~~~~~~~~~li~~r~l~Gig~g~ 127 (445)
...++.+.|+...+.... ..++.-.++|++.+|+|.|+.++++..+.++=. ...+.++.+.+.+.+.++|+..+.
T Consensus 249 ~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l 328 (412)
T PF01306_consen 249 SFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPL 328 (412)
T ss_dssp HTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHH
Confidence 334444444443333332 344556689999999999999999998877743 345788888999999999999999
Q ss_pred hhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHH-HHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHH
Q 013318 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEF-WGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFL 206 (445)
Q Consensus 128 ~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~-~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~ 206 (445)
...+...|+++..+ ++-.++...+. +...++|.++.+.+++.+..+.+ - +..|.+.+
T Consensus 329 ~lva~fkYI~~~fd----------~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-----------~-~~tylimg 386 (412)
T PF01306_consen 329 LLVAAFKYITAHFD----------KRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-----------F-QHTYLIMG 386 (412)
T ss_dssp HHHHHHHHHHHHS-----------GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-----------H-HHHHHHHH
T ss_pred HHHHHHHHHHHhCC----------HhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-----------c-HHHHHHHH
Confidence 99999999999973 33334444442 34456666666666666654332 1 23466666
Q ss_pred HHHHHHHHHHHh-ccC
Q 013318 207 GVITLGTILMCF-LRK 221 (445)
Q Consensus 207 ~l~~~~~~l~~~-l~~ 221 (445)
.+.++..++..+ +++
T Consensus 387 ~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 387 LIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHheeeecC
Confidence 665555555544 444
No 199
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.53 E-value=3.7e-07 Score=76.05 Aligned_cols=126 Identities=16% Similarity=0.116 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHH
Q 013318 297 AVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL 376 (445)
Q Consensus 297 ~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l 376 (445)
..++++..+++++.|++.||++||+.+ ..+.....++.+ ...+.++ .....+..++.|++.+...+..++++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~-~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVL-LVGLFIFVLSTA--MFALSSN-----ITVLIIARFLQGFGAAFALVAGAALI 76 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHH-HHHHHHHHHHHH--HHHHhcc-----HHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 345677889999999999999988754 455554444432 1223322 24556677888999888888889999
Q ss_pred HhhccCC-chhhHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHHHHHHHHH
Q 013318 377 GILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGIL 430 (445)
Q Consensus 377 ~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~~----~~~~~~~i~~~~~~~~~~~~~ 430 (445)
.|.+|++ ++.+.+..+....+|..++..+.+.. ++.+.+.+.....+++.+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (141)
T TIGR00880 77 ADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLA 135 (141)
T ss_pred HHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 9999876 44578888888888887776665433 445556665555555544443
No 200
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.52 E-value=1.2e-06 Score=86.63 Aligned_cols=144 Identities=13% Similarity=-0.064 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHHHHHhhhHhhhhhhc-cCCCCchHHH----HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHH-
Q 013318 30 VHILSCAFLLIFLAYGAAQNLETTVN-TEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV- 103 (445)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~i~-~~~~~g~~~~----~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~- 103 (445)
++...+..++....+.......|.+. ++.+.+.... ........++.++.|++.||+|+|+.+..+..+..+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 300 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAV 300 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 44443444444444444444444433 3344443332 22333456677889999999999998876554333221
Q ss_pred -HH-hh--hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHH-HHHHHHhhhhhhHHHH
Q 013318 104 -AA-NL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEF-WGMFASHQFVGNLITL 178 (445)
Q Consensus 104 -~~-~~--~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~-~~~~~lg~~iG~li~~ 178 (445)
.. .. .++...++...++.|++.+..++...+++.|.. |+++|+++.|+. .....+|..+||.+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------p~~~~~~~~~~~~~~~~~~g~~~~p~~~g 370 (394)
T TIGR00883 301 PLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELF----------PTEVRYTGASLAYNLAGAIFGGFAPYIAA 370 (394)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhC----------CccceeeEeeehhHhHHHHHhhHHHHHHH
Confidence 11 11 245555666778889988888888888888887 467899999984 4445678888998887
Q ss_pred HhhcC
Q 013318 179 AVLKD 183 (445)
Q Consensus 179 ~l~~~ 183 (445)
.+..+
T Consensus 371 ~l~~~ 375 (394)
T TIGR00883 371 ALVAM 375 (394)
T ss_pred HHHHH
Confidence 77654
No 201
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.52 E-value=4.9e-07 Score=92.19 Aligned_cols=145 Identities=10% Similarity=0.039 Sum_probs=92.0
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHHHH----HHhhhhHHHHHHHh--Ccchhhhhhh--HHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSF----TCFSLVASLVVRVL--GSKNALILGT--TGY 99 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~----ai~~l~~g~l~dr~--G~k~~l~~g~--~~~ 99 (445)
++++...+..++...++.......+...++.+.+....+...... .+++++.+++.||. ++|+...++. +..
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 444444444444444443333333444344555554444443333 34556688999973 3444444333 222
Q ss_pred HHHHHH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHH
Q 013318 100 WLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (445)
Q Consensus 100 ~~~~~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~ 178 (445)
.+..+. ...+++..+++.+++.|++.+..++...+++.+.. +++++|+.+|++....++|..+||.+.+
T Consensus 321 ~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~----------~~~~~g~~~g~~~~~~~lg~~igp~i~G 390 (455)
T TIGR00892 321 GLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLV----------GAQRFSSAVGLVTIVECCAVLIGPPLAG 390 (455)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHh----------hHHHHhhHHhHHHHHHHHHHHcccccee
Confidence 222222 24567777888899999999998888888888876 4678999999999999999999998887
Q ss_pred Hhhc
Q 013318 179 AVLK 182 (445)
Q Consensus 179 ~l~~ 182 (445)
.+..
T Consensus 391 ~l~~ 394 (455)
T TIGR00892 391 RLVD 394 (455)
T ss_pred eeeh
Confidence 6653
No 202
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.51 E-value=2.1e-06 Score=86.78 Aligned_cols=110 Identities=10% Similarity=-0.104 Sum_probs=80.1
Q ss_pred HHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hh-cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhcc
Q 013318 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (445)
Q Consensus 70 ~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~-~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~ 147 (445)
....++.++.+++.||+|+|+++.++..+..+..... .. ++...+++..++.|++.+...+...+++++..+.+..
T Consensus 268 i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-- 345 (437)
T TIGR00792 268 VAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEW-- 345 (437)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh--
Confidence 3445677889999999999999999887665544332 22 3555566677888999998888888888877642111
Q ss_pred CCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhc
Q 013318 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (445)
Q Consensus 148 ~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~ 182 (445)
+.+++++|.++|++..+..+|..+|+.+.+.+..
T Consensus 346 -~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 346 -KTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred -hcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1124568999999999999999999988776653
No 203
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.51 E-value=7.4e-07 Score=87.60 Aligned_cols=128 Identities=14% Similarity=0.025 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHHH-----HHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHH
Q 013318 30 VHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTS-----FTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (445)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~-----~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~ 104 (445)
++.+.+..++...++.......+....+.+.+....+..... ..++.+++|++.||+|+|+.+..+.++..+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~ 290 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNA 290 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444444433456665554444432 236778899999999999999888876655433
Q ss_pred Hh-h-h----------cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHH
Q 013318 105 AN-L-F----------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA 167 (445)
Q Consensus 105 ~~-~-~----------~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~ 167 (445)
.. . . ++...++...++.|++.+..++...+++.+.+ |+++||+.+|++++..+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 291 GFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLS----------NPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc----------CCCccHHHHHHHHHHHh
Confidence 22 2 1 34456667788999999999999999999987 58899999999876543
No 204
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.50 E-value=4.4e-06 Score=81.78 Aligned_cols=169 Identities=17% Similarity=0.100 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHH
Q 013318 258 LLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW 337 (445)
Q Consensus 258 ~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~ 337 (445)
+.+....|..|.......+..|+.-.+-+.+....|...+.|+++.++++++...+.||+.||+ +++..+.+..++-++
T Consensus 16 ~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~-lLl~~l~lFi~~n~l 94 (394)
T COG2814 16 LALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRR-LLLGLLALFIVSNLL 94 (394)
T ss_pred HHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHH-HHHHHHHHHHHHHHH
Confidence 3333334444433323334444432222344457899999999999999999999999999887 444444444444332
Q ss_pred HHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCc-hhhHHHHHHHHHHHHHH----HHHhhcchhHH
Q 013318 338 ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAV----VFFIGPYISLQ 412 (445)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~i----g~~i~~~~~~~ 412 (445)
....++ +..+++.-++.|+.-+..++...++..++.|+++ +++.++......++..+ |..++...+++
T Consensus 95 --~alAp~-----f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR 167 (394)
T COG2814 95 --SALAPS-----FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWR 167 (394)
T ss_pred --HHHhcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHH
Confidence 233443 4678888999999999999999999999998765 46888877777766555 45666777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 013318 413 AMLIVMVVGICVALVGILFLTI 434 (445)
Q Consensus 413 ~~~~i~~~~~~~~~~~~~~~~~ 434 (445)
..|....++.++..+.......
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 8888888777777665554433
No 205
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.49 E-value=2.8e-08 Score=97.20 Aligned_cols=138 Identities=13% Similarity=0.130 Sum_probs=106.1
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+++.+..|++..++.+..++.+++.|++.||+.|+. ++.+|..+...+.+ ...+. .. .+.+.++-.+.|+|.
T Consensus 64 ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~-v~~vG~~iW~~Av~--~~~fs--~~---Fwq~~l~R~~vGiGe 135 (493)
T KOG1330|consen 64 NISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKR-VIAVGIFIWTLAVF--ASGFS--NH---FWQVLLCRGFVGIGE 135 (493)
T ss_pred CCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcce-EEeeHHHHHHHHHH--HHHHH--HH---HHHHHHHHHHhccch
Confidence 355677889999999999999999999999998876 56788877665532 22333 12 356778899999999
Q ss_pred hhhhhhhhHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGPYI-----SLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~~~~-----~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
+...|..+++++|++|+++++ .++++++....|..+|++++... .+.|.+...+++.++..++.+.
T Consensus 136 As~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~ 207 (493)
T KOG1330|consen 136 ASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFL 207 (493)
T ss_pred hhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHh
Confidence 999999999999999988665 79999999999999998877543 2555676666665555554443
No 206
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.49 E-value=1.5e-06 Score=86.09 Aligned_cols=137 Identities=13% Similarity=0.045 Sum_probs=90.5
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+++.++.|++.+.+.++.+++++..|+++||+|||+ ++..+......+.. .....++ ...+++.-++.|++.
T Consensus 22 ~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~-~~~~~~~~~~~~~~--~~~~~~~-----~~~l~~~R~l~G~g~ 93 (368)
T TIGR00903 22 DVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRW-FLFGSLATFAAAAG--RLLDPFN-----YEWLLACQLLAALGQ 93 (368)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchH-HHHHHHHHHHHHHH--HHHHhcc-----HHHHHHHHHHHHhHh
Confidence 345567889989999999999999999999999876 43333222222211 1111122 345677788889988
Q ss_pred hhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
+... ...+.+++.+|++++ .+.++.+....+|..++..+.+. .+.++.+.+.+++.++..+...+
T Consensus 94 ~~~~-~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 94 PFLL-NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 7643 444556888886644 57898888888888777655544 36677777766665555444433
No 207
>PRK09952 shikimate transporter; Provisional
Probab=98.48 E-value=1.1e-05 Score=81.97 Aligned_cols=130 Identities=10% Similarity=-0.012 Sum_probs=80.4
Q ss_pred HHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-h---h-cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhc
Q 013318 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L---F-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (445)
Q Consensus 72 ~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~---~-~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~ 146 (445)
..++.++.|+++||+|||+++..+.++..+..... . . ++...++..-++.|++.+..++...++++|..
T Consensus 299 ~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~------ 372 (438)
T PRK09952 299 SCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMF------ 372 (438)
T ss_pred HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
Confidence 34567789999999999999888765443322211 1 1 22334344556668888887877788888887
Q ss_pred cCCCccchhhhhhhHHHHH-HHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccC
Q 013318 147 HKLHEGTVIGSFNGEFWGM-FASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRK 221 (445)
Q Consensus 147 ~~~~~~~~rg~~~g~~~~~-~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~ 221 (445)
|.+.|+...|+.+.. ..+|+.++|.+...+....+ .+|+ ..+....++.+++.+..+.+++
T Consensus 373 ----p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~---------~~~~-~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 373 ----GASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG---------GSWH-SVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred ----CcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCch-HHHHHHHHHHHHHHHHHHHccc
Confidence 456788888875433 34677778877766643221 1343 2333344445555555555654
No 208
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.47 E-value=4.5e-07 Score=87.18 Aligned_cols=139 Identities=14% Similarity=0.131 Sum_probs=111.1
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhh
Q 013318 289 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 368 (445)
Q Consensus 289 ~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 368 (445)
.+++|.+++...+.+.+.+++.|.+.||+|+|.++ ++|++.....-+ +..+..+ +.++++.-.+-|+|+++.
T Consensus 105 ~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm-~~Gl~vmf~sTi--lFafg~s-----y~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 105 NTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPM-VAGLFVMFLSTI--LFAFGNS-----YPMLFVARSLQGVGSAFA 176 (464)
T ss_pred ccchhHHHHHHHHHHHHhcccchhhHHHhccccHH-HHHHHHHHHHHH--HHHHcch-----hHHHHHHHHHhhhhHHHH
Confidence 35789999999999999999999999999999765 678766554422 2344432 357888999999999999
Q ss_pred hhhhhHHHHhhccCCc--hhhHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 369 NTQLSALLGILFKHDT--EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGILFLTIQ 435 (445)
Q Consensus 369 ~~~~~~~l~~~~~~~~--~~a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~ 435 (445)
.+.-.+++++.||+|. ++++|+.-.+.++|..+|+-+++. .+.+..|.++++++++...+-+++...
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 9999999999999875 457888777778888887766654 478899999999999888877766443
No 209
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.46 E-value=8e-06 Score=81.57 Aligned_cols=101 Identities=16% Similarity=0.244 Sum_probs=78.4
Q ss_pred HhhhhHHHHHHHhCcchhhhhhhHHHHH-HHHH-hhhcchhhH----HhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhcc
Q 013318 74 CFSLVASLVVRVLGSKNALILGTTGYWL-FVAA-NLFPSWYTM----VPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (445)
Q Consensus 74 i~~l~~g~l~dr~G~k~~l~~g~~~~~~-~~~~-~~~~~~~~l----i~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~ 147 (445)
..-.+++++.+|+|.|+++.++.+.+.+ +..- ...++.+.. +..-.++|+.-+..+.+...|+.+..
T Consensus 258 ~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~------- 330 (400)
T PF03825_consen 258 PFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIA------- 330 (400)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-------
Confidence 3445789999999999999999988776 3332 232443322 23346799999999999999999987
Q ss_pred CCCccchhhhhhhHHHHH-HHHhhhhhhHHHHHhhcCc
Q 013318 148 KLHEGTVIGSFNGEFWGM-FASHQFVGNLITLAVLKDD 184 (445)
Q Consensus 148 ~~~~~~~rg~~~g~~~~~-~~lg~~iG~li~~~l~~~~ 184 (445)
|++.|+++-|++.+. .++|..+|+++++.+.++.
T Consensus 331 ---p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~ 365 (400)
T PF03825_consen 331 ---PPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAF 365 (400)
T ss_pred ---CccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 578899999998775 5799999999999887654
No 210
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.46 E-value=1.4e-06 Score=89.17 Aligned_cols=140 Identities=12% Similarity=-0.018 Sum_probs=93.0
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhcc-----C--CCCccchhHHHHHHH
Q 013318 287 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYS-----V--TSGVLGTLYPLIMAA 359 (445)
Q Consensus 287 ~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~ 359 (445)
.+..+.+++.+.+.++.++++++.|+++||+|||+.+ ..+.++..++.+. ..++ + .++......+++.-+
T Consensus 52 ~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~-~~~~~l~~i~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~R~ 128 (479)
T PRK10077 52 AANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL-KIAAVLFFISALG--SAWPEFGFTSIGPDNTGYVPEFVIYRI 128 (479)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHHH--HHhhccccccccccchhHHHHHHHHHH
Confidence 3445778889999999999999999999999999854 5555554443221 1111 0 011000123456778
Q ss_pred HHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhc------------chhHHHHHHHHHHHHHHHH
Q 013318 360 LLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP------------YISLQAMLIVMVVGICVAL 426 (445)
Q Consensus 360 l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~------------~~~~~~~~~i~~~~~~~~~ 426 (445)
+.|++.+...+...++++|.+|++ |+.+.+..+....+|..+++++.. ..++++.+.+.++..++..
T Consensus 129 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 129 IGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred HHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 899999999999999999999876 445788888777777776654431 1245666666555444444
Q ss_pred HHH
Q 013318 427 VGI 429 (445)
Q Consensus 427 ~~~ 429 (445)
+..
T Consensus 209 ~~~ 211 (479)
T PRK10077 209 MLL 211 (479)
T ss_pred HHH
Confidence 333
No 211
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.45 E-value=3.5e-06 Score=95.85 Aligned_cols=114 Identities=19% Similarity=0.021 Sum_probs=81.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhh
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 370 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 370 (445)
..++..+++.+..++.+++.|+++||++||+.+..........+.........++ +..++++.++.|++.+...|
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s-----~~~l~~~~~l~gi~~a~~~p 127 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNS-----VPLLFAALFLMGIHSALFGP 127 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHhhch
Confidence 4677778899999999999999999999887432211111111111111111122 35677888999999999999
Q ss_pred hhhHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHhhcch
Q 013318 371 QLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 409 (445)
Q Consensus 371 ~~~~~l~~~~~~~~-~~a~~~~~~~~~~g~~ig~~i~~~~ 409 (445)
...+++.+++|+++ +.++|+.+...++|.++|+.+.+.+
T Consensus 128 ~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l 167 (1140)
T PRK06814 128 IKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA 167 (1140)
T ss_pred HHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998775 4589999999998888887777553
No 212
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.42 E-value=2.8e-06 Score=87.81 Aligned_cols=138 Identities=10% Similarity=-0.020 Sum_probs=75.1
Q ss_pred HhhhhHHHHHHHhCcchhhhhhhHHHHHHHH--Hhhh---cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccC
Q 013318 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVA--ANLF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (445)
Q Consensus 74 i~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~--~~~~---~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~ 148 (445)
++.+++++++||+|||+.++++..+.++... .... ++...+...-+...++....++....+.+|..
T Consensus 350 ~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-------- 421 (502)
T TIGR00887 350 PGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF-------- 421 (502)
T ss_pred HHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC--------
Confidence 4667889999999999999888765443322 2111 11111111111111111111223344556665
Q ss_pred CCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCc
Q 013318 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 223 (445)
Q Consensus 149 ~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~ 223 (445)
|++.|++..|+......++.++++.+...+......... .....+. ...|.+++++.+++.+..+++||++
T Consensus 422 --p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 422 --PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKG-YPTGIWM-GHVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred --chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccc-ccccccc-hHHHHHHHHHHHHHHHHheEeccCC
Confidence 567899999999999999999998777665432110000 0000121 2345666666666655445666643
No 213
>PRK09848 glucuronide transporter; Provisional
Probab=98.42 E-value=2.4e-06 Score=86.90 Aligned_cols=153 Identities=12% Similarity=-0.059 Sum_probs=96.1
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhhhhhccC-CCCchHHHHHH----HHHHHHhhhhHHHHHHHhCcchhhhhhhHHHH
Q 013318 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTE-GNLGTISLGIL----YTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (445)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~-~~~g~~~~~~~----~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~ 100 (445)
..|++..+.+..++.+.++.......+...++ .+......... .....+++++.+++.||+|+|+++.+|..+..
T Consensus 226 ~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~ 305 (448)
T PRK09848 226 RNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGT 305 (448)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34555555566666555554444444433322 23322211111 12234567788999999999999999987655
Q ss_pred HHHHHh-hh--cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHH
Q 013318 101 LFVAAN-LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (445)
Q Consensus 101 ~~~~~~-~~--~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~ 177 (445)
+..... +. ++++.+++.-++.|+|.+...+...+..++..+++... ..++++|..+|++.....+|..+|+.+.
T Consensus 306 i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~---~g~r~~G~~~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 306 CGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYL---TGVRIEGLTYSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh---hCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 543332 22 34555566678899999999988888888776532111 1123468999999999999999998877
Q ss_pred HHhh
Q 013318 178 LAVL 181 (445)
Q Consensus 178 ~~l~ 181 (445)
..+.
T Consensus 383 g~~l 386 (448)
T PRK09848 383 AFIL 386 (448)
T ss_pred HHHH
Confidence 6554
No 214
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.42 E-value=1.1e-06 Score=89.68 Aligned_cols=139 Identities=9% Similarity=-0.015 Sum_probs=97.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+++..+.|.+.+.+.++.++++++.|++.||+|+|+. +..+.++..++.++....... . ...+++..++.|++.
T Consensus 72 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-l~~~~~~~~~~~~~~~~~~~~--~---~~~l~~~r~~~G~~~ 145 (465)
T TIGR00894 72 KWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWS-IGIGMFLSSVISIVIPWAAGG--G---IALVVFCRVIQGLAQ 145 (465)
T ss_pred CCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchh-hHHHHHHHHHHHHHHHHHHHc--C---chHHHHHHHHHHHhc
Confidence 3445568888999999999999999999999999874 455555544432211111111 1 235667788899999
Q ss_pred hhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY-----ISLQAMLIVMVVGICVALVGIL 430 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~-----~~~~~~~~i~~~~~~~~~~~~~ 430 (445)
+...+....++++.+|++ ++.+.|+.+....+|..+++.+.+. .++.+.+++.++..++..+..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~ 216 (465)
T TIGR00894 146 GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWF 216 (465)
T ss_pred ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHH
Confidence 999999999999999865 4557888888888888777655533 2455567776665554444433
No 215
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.39 E-value=4.1e-06 Score=81.52 Aligned_cols=142 Identities=13% Similarity=0.078 Sum_probs=104.2
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhh
Q 013318 287 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 366 (445)
Q Consensus 287 ~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 366 (445)
++.+++|.+.+.+.++..++.++.|.++||...|+ ++..|+++.+++.+ +..+.++ ..++.++.++-|...+
T Consensus 61 lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~-fm~~gLilsai~ni--l~Gfs~s-----~~~~~~l~~lng~fQg 132 (448)
T COG2271 61 LSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY-FMAFGLILSAIVNI--LFGFSPS-----LFLFAVLWVLNGWFQG 132 (448)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce-eehHHHHHHHHHHH--HHhhhhH-----HHHHHHHHHHHHHHhc
Confidence 77779999999999999999999999999998887 55678877766543 3455432 2456667778899999
Q ss_pred hhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhh------cchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 367 VLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG------PYISLQAMLIVMVVGICVALVGILFLTIQV 436 (445)
Q Consensus 367 ~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 436 (445)
...|.....+++-+|++ |++..|+-|.-.++|.++.+.+. ...+....|++-+++.++-.+..++..+..
T Consensus 133 ~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 133 MGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred CCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 98999999999999865 56678887777777766544333 223566778777776665555555554433
No 216
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.37 E-value=9.8e-06 Score=82.06 Aligned_cols=129 Identities=11% Similarity=-0.020 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCc---cchhHHHHHHHHHhhhhhhhh
Q 013318 293 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGV---LGTLYPLIMAALLGIGDGVLN 369 (445)
Q Consensus 293 g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~G~~~~~~~ 369 (445)
+.+.....++..+|++++|+++||+|||+. +..+.++..++.+ ...+.++... ..+..+++.-++.|++.+...
T Consensus 66 ~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~-l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~ 142 (432)
T PRK10406 66 AGVFAAGFLMRPIGGWLFGRIADKHGRKKS-MLISVCMMCFGSL--VIACLPGYETIGTWAPALLLLARLFQGLSVGGEY 142 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHH-HHHHHHHHHHHHH--HHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhH
Confidence 334444555666999999999999999984 4566655544432 2233333110 001235667788999999999
Q ss_pred hhhhHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhh----c--------chhHHHHHHHHHHHHHH
Q 013318 370 TQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIG----P--------YISLQAMLIVMVVGICV 424 (445)
Q Consensus 370 ~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~----~--------~~~~~~~~~i~~~~~~~ 424 (445)
+...++++|.+|++++. +.+..+.....|..++..+. . ..++++.|.+.++..++
T Consensus 143 ~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll 210 (432)
T PRK10406 143 GTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVV 210 (432)
T ss_pred hhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH
Confidence 99999999999876554 56776666666655554332 1 23455666655444443
No 217
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.36 E-value=2.4e-06 Score=90.41 Aligned_cols=119 Identities=15% Similarity=0.080 Sum_probs=86.9
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccC---------------------
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV--------------------- 344 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~--------------------- 344 (445)
+++..+.|.+.+.+-++.+++.++.|++.||.+||+ ++..|.++.+++.++ ...++
T Consensus 64 ~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~-~i~~g~ll~~lg~ll--~alphf~~~~y~~~~~~~~~~~~~~~ 140 (633)
T TIGR00805 64 KLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI-VIGIGCAIMGLGSFL--LSLPHFLSGRYSYSTTVSSTGNLSSA 140 (633)
T ss_pred CCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce-EEEecHHHHHHHHHH--HhChHHhcCCcccccccccccccccc
Confidence 344557899999999999999999999999999887 446666665554321 12221
Q ss_pred -------C-----------------CC-ccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHHHHHHHHHH
Q 013318 345 -------T-----------------SG-VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCAS 398 (445)
Q Consensus 345 -------~-----------------~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g 398 (445)
+ .. ...+..+++.-++.|+|.+...+...+++.|.+|++++ .+.|+++....+|
T Consensus 141 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG 220 (633)
T TIGR00805 141 NSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFG 220 (633)
T ss_pred ccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhh
Confidence 0 00 00123456788899999999999999999999987755 4788988888888
Q ss_pred HHHHHHhhc
Q 013318 399 IAVVFFIGP 407 (445)
Q Consensus 399 ~~ig~~i~~ 407 (445)
.++|+.+.+
T Consensus 221 ~~lG~llgg 229 (633)
T TIGR00805 221 PAFGYLLGS 229 (633)
T ss_pred hHHHHHHHH
Confidence 888876654
No 218
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.35 E-value=0.0012 Score=67.02 Aligned_cols=281 Identities=12% Similarity=0.060 Sum_probs=138.8
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhHhhhhhhccC-CCCch--HH---HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhH
Q 013318 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTE-GNLGT--IS---LGILYTSFTCFSLVASLVVRVLGSKNALILGTT 97 (445)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~-~~~g~--~~---~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~ 97 (445)
+.+.+.++.+++.++|+..+|...-.+-+++..+ .+-|. +. ...+..+..+..+..+++++|++|++.+-+-..
T Consensus 3 ~~E~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 3 VHELKKFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 3466788889999999999998877776665332 22222 22 122222223336778999999999999887776
Q ss_pred HHHHHHHHh---hhcchhh--------------------------------HHh-HHHHhhhhhHHhhhhhhhHHHHhhh
Q 013318 98 GYWLFVAAN---LFPSWYT--------------------------------MVP-ASLYLGFAASIIWVGEGTYLTAAAL 141 (445)
Q Consensus 98 ~~~~~~~~~---~~~~~~~--------------------------------li~-~r~l~Gig~g~~~~~~~~~i~~~~~ 141 (445)
.+..+.+.+ .+|+-.. +++ +.+..-+-.+ ...-++++|..
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS---~lFW~fandi~- 158 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLS---LLFWGFANQIT- 158 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHH---HHHHHHHHhcC-
Confidence 655444332 2222111 110 1111111111 01123444554
Q ss_pred hhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchh---HHHHHHHHHHHHHHHHHh
Q 013318 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTL---LFIVFLGVITLGTILMCF 218 (445)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~---~~~i~~~l~~~~~~l~~~ 218 (445)
.++|-.|.++++.++.++|..+|+.+...+.+.... .+.+...|... ++.+..++..+...+...
T Consensus 159 ---------t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 226 (472)
T TIGR00769 159 ---------TIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRAS---LGPGVDGWHVSLKNLMVIVICSGLAIILLYWW 226 (472)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---cccccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466778999999999999999999776665422100 00011123211 122222222222222233
Q ss_pred ccC-CcccCc--c-cccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhccccccccccc----c
Q 013318 219 LRK-EEDKGE--K-ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV----S 290 (445)
Q Consensus 219 l~~-~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~----~ 290 (445)
+.+ ..++++ + +..+++++++.+..+ ..+.++|+|..+.+..+.+..+.+.++....+-..+.+..-+. .
T Consensus 227 l~~~~~~~~~~~~~~~~~~k~k~k~~~~e---s~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~ 303 (472)
T TIGR00769 227 VNRNVLTDPRSYNPALKEKKVKPKMSTME---SLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSA 303 (472)
T ss_pred HHhcccCCccccchhhccccCCCCCCHHH---HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 322 111111 0 000001111122233 3344678888777766666666655443221111111100011 1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCccch
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFI 323 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~ 323 (445)
..|.+....++...+..++.+++.+|+|-+...
T Consensus 304 f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a 336 (472)
T TIGR00769 304 FMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAA 336 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 244445556666667777779999999866433
No 219
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.33 E-value=1.6e-05 Score=80.44 Aligned_cols=152 Identities=16% Similarity=0.066 Sum_probs=102.6
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhh----ccCCCCchHHHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTV----NTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i----~~~~~~g~~~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~ 103 (445)
|++..+.+..++...+........+.. ....+.......+......++.++.+++.||+|+|+++..+.++..+..
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~ 304 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGF 304 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHH
Confidence 455555555555555544333222222 1112222222334444556677889999999999999999998877655
Q ss_pred HHh-hh--cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 104 AAN-LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 104 ~~~-~~--~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
+.. +. ++...+++.-++.|+|.+..++...+.++|..+.+....+ +++.|..+|.+.....++..+++.+...+
T Consensus 305 ~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg---~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 305 LLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTG---RRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcC---CCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 543 33 4888888899999999999999999999999864422222 34568888888888888988888776655
Q ss_pred hc
Q 013318 181 LK 182 (445)
Q Consensus 181 ~~ 182 (445)
..
T Consensus 382 l~ 383 (428)
T PF13347_consen 382 LA 383 (428)
T ss_pred HH
Confidence 43
No 220
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.32 E-value=2.8e-05 Score=77.47 Aligned_cols=125 Identities=14% Similarity=-0.016 Sum_probs=79.5
Q ss_pred hhhhhccCCCCchHHHHHHHH-----HHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hh------hcchhhHHhH
Q 013318 50 LETTVNTEGNLGTISLGILYT-----SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NL------FPSWYTMVPA 117 (445)
Q Consensus 50 ~~~~i~~~~~~g~~~~~~~~~-----~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~------~~~~~~li~~ 117 (445)
..+....|.+.+....+.... ...++.++.|++.||+|+|+.+.++..+..+.... .. .++...+...
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 333333455666655555443 22345778999999999999998877544221111 11 1222333334
Q ss_pred HHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcC
Q 013318 118 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (445)
Q Consensus 118 r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~ 183 (445)
-.+.+++.+...++..+.+.+..+ +++++|+.+++.++..++|..+|+.+++.+...
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~ 366 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAG---------DGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR 366 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC---------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666665666555542 246889999999999999999999998877643
No 221
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.27 E-value=4.8e-05 Score=73.43 Aligned_cols=105 Identities=14% Similarity=0.064 Sum_probs=72.6
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhh
Q 013318 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (445)
Q Consensus 65 ~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~ 143 (445)
.+.....++++.++.+++.||+|+||.+.++..+..+..... ..++...+ ..-++.|++.+..+|...+...+..
T Consensus 184 ~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~--- 259 (310)
T TIGR01272 184 TAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNAL--- 259 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhh---
Confidence 455666778899999999999999999888876555544333 23333222 2445789999999998776666654
Q ss_pred hhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhc
Q 013318 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (445)
Q Consensus 144 ~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~ 182 (445)
+++.+++.++. ....+|..++|++.+.+..
T Consensus 260 --------~~~~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 260 --------GRHTSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred --------hhhhhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 33456666765 4566788888876666654
No 222
>PTZ00207 hypothetical protein; Provisional
Probab=98.27 E-value=2e-05 Score=81.98 Aligned_cols=138 Identities=11% Similarity=0.048 Sum_probs=87.7
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCC--CCccchhHHHHHHHHHhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT--SGVLGTLYPLIMAALLGI 363 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~G~ 363 (445)
+++.++++.+... +.....+.++.|++.||+|+|+ ++.++.++..++.++..+..... .+ ...+++..++.|+
T Consensus 58 gls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~-vllig~ll~~iG~ll~ala~~~~i~~s---~~~l~l~r~l~G~ 132 (591)
T PTZ00207 58 NLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPRP-IFVLSMTVFCLGTLLFALTFQEVIEGS---VVRLSVYNGLMTL 132 (591)
T ss_pred CcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHhcccccCc---HHHHHHHHHHHHH
Confidence 4444566665544 3333456667899999999987 55677777666544222221110 11 2456667778899
Q ss_pred hhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHH-HHHhhcch--hHHHHHHHHHHHHHHHHHH
Q 013318 364 GDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAV-VFFIGPYI--SLQAMLIVMVVGICVALVG 428 (445)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~i-g~~i~~~~--~~~~~~~i~~~~~~~~~~~ 428 (445)
+.+...+.....+.+.+|++|+.+.|+.+....+|+++ +.+....+ +....+++++++.++.++.
T Consensus 133 G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 133 GCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 98888777778888899988888899999999998864 33333332 3445555555544444333
No 223
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.23 E-value=1.8e-05 Score=79.16 Aligned_cols=139 Identities=16% Similarity=0.099 Sum_probs=103.9
Q ss_pred cccccch-hHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhh
Q 013318 285 PALGVSG-VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 363 (445)
Q Consensus 285 ~~~~~~~-~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 363 (445)
.+++.++ .|.+...+..+.++..++.|+++||+|.|+ ++..+.+...+..+ ++.+..+ ...+.++-+++|+
T Consensus 56 lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~-vL~l~~l~Wsl~t~--L~~fa~S-----l~~L~i~R~llGv 127 (511)
T TIGR00806 56 LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP-VLVLQALSFVCVWL--LLLLGTS-----VWHMQLMEVFYSV 127 (511)
T ss_pred cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHH--HHHHHHH-----HHHHHHHHHHHHH
Confidence 4556667 899999999999999999999999999987 45566655554432 2334322 2457788999999
Q ss_pred hhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhc------chhHHHHHHHHHHHHHHHHHHHHHH
Q 013318 364 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP------YISLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~------~~~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
+.+... ..+.++...+|++ ++.+.|+.+....+|.+++..+.+ +..+..-.++..+..++++++.+++
T Consensus 128 aEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~L 202 (511)
T TIGR00806 128 TMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFL 202 (511)
T ss_pred HHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 999988 8889999999876 455889999999999887765553 3345555677777777777766665
No 224
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.23 E-value=5.4e-05 Score=70.06 Aligned_cols=122 Identities=14% Similarity=0.089 Sum_probs=76.6
Q ss_pred hhhhhhccCCCCchHHHHHHHHHHHH---hhhhHHHHHHHhCcchhhhhhhHHHHH-HHHHh--h-----hcchhhHHhH
Q 013318 49 NLETTVNTEGNLGTISLGILYTSFTC---FSLVASLVVRVLGSKNALILGTTGYWL-FVAAN--L-----FPSWYTMVPA 117 (445)
Q Consensus 49 ~~~~~i~~~~~~g~~~~~~~~~~~ai---~~l~~g~l~dr~G~k~~l~~g~~~~~~-~~~~~--~-----~~~~~~li~~ 117 (445)
...|++.+..+.+..+...+-..--+ ..+++|.+.|++|++.++.+|.+...+ |.... . .++.+.+...
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~ 102 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLF 102 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHH
Confidence 45566655555555443333322212 347899999999999999999875443 32221 1 1456667666
Q ss_pred HHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 118 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 118 r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
.++.|.|.+...++......+++ |++||++.|+.-+.++++..+=..+...+.
T Consensus 103 ~~l~~~s~~~~~ta~lvt~~~NF-----------P~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 103 LFLGGNSSCWFNTASLVTCVRNF-----------PRSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHHHcccHHHhhhHHHHHHHHhC-----------ccccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 67777776655555444334443 578999999999999888765554444443
No 225
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.21 E-value=0.0011 Score=63.87 Aligned_cols=355 Identities=14% Similarity=0.083 Sum_probs=155.0
Q ss_pred cccccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHHHHHHhh--hhHHHHHH-----HhCcchhhhhh
Q 013318 23 PKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFS--LVASLVVR-----VLGSKNALILG 95 (445)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~ai~~--l~~g~l~d-----r~G~k~~l~~g 95 (445)
.+...+++..+....+.=-..+ +.+...|.+.+..+.++.+.+++-..+.-.+ +...+++| |+||||..++=
T Consensus 26 ~~~d~~~illLl~LYllQGiP~-GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPL-GLIGAIPLLLQAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCch-hHhhhhHHHhcCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeee
Confidence 3445666666544333321111 1223556677778888887776655554333 35667777 99999987544
Q ss_pred h-HHHHHHHHHh--h----------hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHH
Q 013318 96 T-TGYWLFVAAN--L----------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEF 162 (445)
Q Consensus 96 ~-~~~~~~~~~~--~----------~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~ 162 (445)
+ .+.+.+.... . .|+-..+-..-++.-+.++....+.-...-..- ++++.|-+..-.
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmL----------s~e~lgyaST~q 174 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTML----------SRENLGYASTCQ 174 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhc----------CHhhcCchhHHH
Confidence 3 2222222211 1 122222222334555555554444332222222 345666665555
Q ss_pred HHHHHHhhhhhhHHHHHhhcCccccccc----c--CCCCCcchhHHHHHHHHHHHHHHHHHhccCCcccCcccccccchh
Q 013318 163 WGMFASHQFVGNLITLAVLKDDKVCAAL----L--GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVN 236 (445)
Q Consensus 163 ~~~~~lg~~iG~li~~~l~~~~~~~~~~----~--~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 236 (445)
..+.+.|..+|+.+-..+.. ..-|+.- + .|...--.. ++.-+.+.+++..+..+.+++++++.+++.
T Consensus 175 ~Vg~~~GyfL~~~ifLaL~s-~dF~N~y~rs~P~~~g~ItL~gy-~~fwg~~~~vat~Lv~~~kke~~~~~~~e~----- 247 (510)
T KOG3574|consen 175 SVGQTAGYFLGNVVFLALES-PDFCNTYLRSIPLDQGFITLAGY-LWFWGALFIVATTLVALLKKENDESVDEEL----- 247 (510)
T ss_pred HHHHhhhHHhhcceeeEecC-hhhhhHHHhcCcCccceEEhhHH-HHHHHHHHHHHHHHHHHhcCCCchhhhhhh-----
Confidence 55555555555543322221 1122220 0 010000011 111233344444444444443322221111
Q ss_pred hhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH--hhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccc
Q 013318 237 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW--AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 314 (445)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~--~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~ 314 (445)
..+..+..+-..+.+|-|.+..+.......- .+|.- +..+..+.+.|+..++.+++....--.+++.....|+.+
T Consensus 248 -~~~i~~~yk~l~~vLklk~v~~la~i~lt~K--~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~t 324 (510)
T KOG3574|consen 248 -ELGIHESYKLLRDVLKLKSVRWLAGILLTGK--LGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWT 324 (510)
T ss_pred -hcCHHHHHHHHHHHHcCccHHHHHHHHHHHH--HHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeec
Confidence 1122333444556666777655543222211 12321 122222345566555655544444444555555556554
Q ss_pred cC------CCCccchHhHHHHHHHHHHHHHHhhccC-CCCc-cchhH-HHHHHHHHhhhhhhhhhhhhHHHHhhccCCch
Q 013318 315 TG------LPSITFIVSGGAIAQVVVFLWILINYSV-TSGV-LGTLY-PLIMAALLGIGDGVLNTQLSALLGILFKHDTE 385 (445)
Q Consensus 315 d~------~g~~~~~i~~g~~~~~~~~~~~~~~~~~-~~~~-~~~~~-~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~ 385 (445)
.+ +-|+.+ ..++.......+++..-.+.+ +..+ ..+.+ .+....+.+...-.......+..+++.|+..+
T Consensus 325 a~~~pl~~~lka~~-~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~ig 403 (510)
T KOG3574|consen 325 AGPRPLNVFLKAVP-YRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIG 403 (510)
T ss_pred CCCCcchHHHHhhh-HHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccC
Confidence 32 111111 112211111122211112222 1111 01122 22234455554444445566777888776655
Q ss_pred -hhHHHHHHHHHHHH
Q 013318 386 -GAFAQLKVWQCASI 399 (445)
Q Consensus 386 -~a~~~~~~~~~~g~ 399 (445)
+.+.+.|...++|.
T Consensus 404 gTymTlLNTLsnLGg 418 (510)
T KOG3574|consen 404 GTYMTLLNTLSNLGG 418 (510)
T ss_pred ccHHHHHHHHHHhcC
Confidence 46788888888873
No 226
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.21 E-value=3.3e-05 Score=75.27 Aligned_cols=168 Identities=16% Similarity=0.129 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHHHhhhccccc-ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHH-HHHH
Q 013318 260 IIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV-VFLW 337 (445)
Q Consensus 260 l~~~~~~~g~~~~f~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~-~~~~ 337 (445)
+....+..+++.-...+.....+. +-+++.++.+++.+...+...+.+++.|.+.||+|.|+.. ..+.++.++ ++.
T Consensus 18 ~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~-~~s~~l~~IP~~~- 95 (417)
T COG2223 18 LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT-ILSMLLLLIPCLG- 95 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH-HHHHHHHHHHHHH-
Confidence 333444555554333333333332 2344455899999999999999999999999999988744 455444333 332
Q ss_pred HHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----hh--
Q 013318 338 ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----IS-- 410 (445)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----~~-- 410 (445)
..+..+... +..++++..+.|++.+.. ..-.+.++..||++ ++.|.|++- ..++|.++.-++.|. ..
T Consensus 96 --~~~a~~~~~--~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~ 169 (417)
T COG2223 96 --LAFAVTYPS--TWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFL 169 (417)
T ss_pred --HHHHccCCc--hHHHHHHHHHHhccccee-hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhH
Confidence 122222111 235677888888876554 44556788899987 556888887 667777665555543 33
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 411 -LQAMLIVMVVGICVALVGILFLTIQ 435 (445)
Q Consensus 411 -~~~~~~i~~~~~~~~~~~~~~~~~~ 435 (445)
.+....+..+.+++..+.+.+..+.
T Consensus 170 ~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 170 AWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4445566666666666666555433
No 227
>PRK15075 citrate-proton symporter; Provisional
Probab=98.21 E-value=6.1e-05 Score=76.27 Aligned_cols=127 Identities=15% Similarity=0.016 Sum_probs=73.1
Q ss_pred hhHhhhhhhccC-CCCchHHHHHH----HHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHH--HH-h--hhcchhhHH
Q 013318 46 AAQNLETTVNTE-GNLGTISLGIL----YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV--AA-N--LFPSWYTMV 115 (445)
Q Consensus 46 ~~~~~~~~i~~~-~~~g~~~~~~~----~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~--~~-~--~~~~~~~li 115 (445)
......|.+.++ .+.+....+.. .....++.++.|++.||+|||++++.+..+..+.. .. . ..+++..+.
T Consensus 256 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK15075 256 LITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARML 335 (434)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 333445554332 45554332222 22345677889999999999999887654332211 11 1 123333333
Q ss_pred hHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHH-HhhhhhhHHHHHhhc
Q 013318 116 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA-SHQFVGNLITLAVLK 182 (445)
Q Consensus 116 ~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~-lg~~iG~li~~~l~~ 182 (445)
....+.|++.+...+....++.|.. |+++||...|+.+.... ++..++|.+...+..
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~e~~----------p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 336 AVELWLSFLYGSYNGAMVVALTEVM----------PAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHC----------CCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3345566666666665566777776 56789999998654333 345667777665543
No 228
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.13 E-value=4e-05 Score=79.42 Aligned_cols=138 Identities=17% Similarity=0.123 Sum_probs=86.1
Q ss_pred cccccc-hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhh
Q 013318 285 PALGVS-GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 363 (445)
Q Consensus 285 ~~~~~~-~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 363 (445)
.++|.+ ...++.....++..++.++.|+++|.+|||. +++.+.++..++.+. ..-.++ .........+.|+
T Consensus 72 ~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~-~~i~g~~l~vvG~Iv--~atA~~-----~~~~iag~~l~Gv 143 (599)
T PF06609_consen 72 ADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRY-FFIIGSLLGVVGSIV--CATAQN-----MNTFIAGMVLYGV 143 (599)
T ss_pred HhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchH-HHHHHHHHHHhHHHH--hhcCCc-----HHHHHHHHHHHHH
Confidence 345543 4556667788899999999999999999997 556777777666542 232322 2346667888899
Q ss_pred hhhhhhhhhhHHHHhhccCCchh-hHHHHHHHHHH----HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Q 013318 364 GDGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCA----SIAVVFFIGPYISLQAMLIVMVVGICVALVGILF 431 (445)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~~~~~-a~~~~~~~~~~----g~~ig~~i~~~~~~~~~~~i~~~~~~~~~~~~~~ 431 (445)
|.+... .....++|+.|.+.|. ..++....... |..++..+...-+++|.+++......++++..++
T Consensus 144 gaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 144 GAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred hhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 865554 4566789999876553 23322221111 2223333333447888888877766666554433
No 229
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.12 E-value=3.5e-05 Score=73.67 Aligned_cols=119 Identities=18% Similarity=0.206 Sum_probs=85.3
Q ss_pred HhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhh---hcchh--hHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccC
Q 013318 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVAANL---FPSWY--TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (445)
Q Consensus 74 i~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~---~~~~~--~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~ 148 (445)
-|.++.++++||+|||++|.++.++++++.+... .+|.. .+.++|++.-.+ +.+.+.|-.|+.
T Consensus 396 PGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~----fqvaYvYtPEVy-------- 463 (528)
T KOG0253|consen 396 PGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGA----FQVAYVYTPEVY-------- 463 (528)
T ss_pred CchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhch----heEEEEecCccc--------
Confidence 4778999999999999999999999888877532 34443 334567665433 345577778887
Q ss_pred CCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhcc
Q 013318 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLR 220 (445)
Q Consensus 149 ~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~ 220 (445)
|.+-|+...|.-.+..-+|+++.|+++.-.. .+ ......+++++++++.+..+++|
T Consensus 464 --PTavRatgvGtcSsmaRIggI~~p~iA~~~e--~s------------~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 464 --PTAVRATGVGTCSSMARIGGIFSPVIAMRAE--LS------------TSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred --chhhhhcchhhhhhHHhhhhhhhhHHHHHhc--cc------------eeehHHHHHHHHHHHHHHheeee
Confidence 4678999999988888888888888883222 11 12234567888888877777887
No 230
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.12 E-value=2.2e-05 Score=78.17 Aligned_cols=142 Identities=23% Similarity=0.293 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCC-CCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhh
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 369 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~-g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 369 (445)
+..-.+..++...-+..+++||++||+ |+|++ +..|.++.+++.+. +..++... +..+++..++.++|.|...
T Consensus 62 ~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t-I~lGail~~iGh~~--L~~~~~~~---~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 62 HATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT-IVLGAILMAIGHLV--LAISSVSG---PGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-HHHHHHHHHHHHHH--Hhcccccc---ccHHHHHHHHHHhcccccc
Confidence 333344556555567778899999996 77775 46788887777642 34442111 3567788888889999999
Q ss_pred hhhhHHHHhhccCC--ch-hhHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013318 370 TQLSALLGILFKHD--TE-GAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFLTIQVEK 438 (445)
Q Consensus 370 ~~~~~~l~~~~~~~--~~-~a~~~~~~~~~~g~~ig~~i~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 438 (445)
+-..+++++++|++ |+ +.++++....++|+.+++.+.++. ++++.|.+.++...++.+.+...+++...
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 99999999999754 33 368877777778887777776654 67888888888888998888776665543
No 231
>PRK09669 putative symporter YagG; Provisional
Probab=98.10 E-value=7.9e-05 Score=75.73 Aligned_cols=107 Identities=7% Similarity=0.007 Sum_probs=75.3
Q ss_pred HHhhhhHHHHHHHhCcchhhhhhhHHHHHHHH-Hhh--hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCC
Q 013318 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVA-ANL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (445)
Q Consensus 73 ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~-~~~--~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~ 149 (445)
.++.++.+++.||+|+|+.+.++..+..+... ... .++...+++..++.|+|.+...+...+.++|..+.....
T Consensus 278 ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~--- 354 (444)
T PRK09669 278 LFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKR--- 354 (444)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh---
Confidence 35667889999999999999888765543222 222 245666677788999999999999888998887521100
Q ss_pred CccchhhhhhhHHHHHHHHhhhhhhHHHHHhhc
Q 013318 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (445)
Q Consensus 150 ~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~ 182 (445)
.-+++.|..+|.+..+..+|..+|+.+++.+..
T Consensus 355 ~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 355 SGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred cCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012234567788877888999999988766554
No 232
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.98 E-value=0.00028 Score=70.73 Aligned_cols=153 Identities=14% Similarity=0.010 Sum_probs=98.7
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHH-----HHHHHHH-HHHhhhhHHHHHHHhCcchhhhhhhHHH
Q 013318 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS-----LGILYTS-FTCFSLVASLVVRVLGSKNALILGTTGY 99 (445)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~-----~~~~~~~-~ai~~l~~g~l~dr~G~k~~l~~g~~~~ 99 (445)
..|++..+.+.+++.+.+++....+..... +..+|... ....+.+ ..++.++.+++.+|+|+|+++.++.+++
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~-~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~ 312 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYV-TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLL 312 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeE-EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHH
Confidence 445566666677777777665444433322 22333211 2222222 3344788999999999999999999888
Q ss_pred HHHHHHh-hh--cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHH
Q 013318 100 WLFVAAN-LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (445)
Q Consensus 100 ~~~~~~~-~~--~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li 176 (445)
.+..+.. +. ++...+++..++.++|.+..++-.-+.++|..+..-...+ .++-|...|....+..+|..+|+.+
T Consensus 313 ~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG---~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 313 AVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTG---VRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred HHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhC---CCchhhHHHHHHHHHHHHHHHHHHH
Confidence 7766654 33 4677778888999999999888888888887643211111 2334566677666678888888866
Q ss_pred HHHhhc
Q 013318 177 TLAVLK 182 (445)
Q Consensus 177 ~~~l~~ 182 (445)
.++.+.
T Consensus 390 ~g~~L~ 395 (467)
T COG2211 390 PGWILG 395 (467)
T ss_pred HHHHHH
Confidence 554443
No 233
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.98 E-value=0.00012 Score=75.05 Aligned_cols=112 Identities=15% Similarity=0.145 Sum_probs=76.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccC----CCCccchHhHHHHHHHHHHHHHHhhccCCCC-ccchhHHHHHHHH
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSG-VLGTLYPLIMAAL 360 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~----~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 360 (445)
+++...+|.++.+.-+..++..++.|+++|| +|||++.++.+.+...+++.+ +..+|+.+ .......++...+
T Consensus 38 Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~l--lf~~p~~~~~~~~~~~~~~~~l 115 (473)
T PRK10429 38 GLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFL--LFSAHLFEGTAQYVFVCVTYIL 115 (473)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHH--HHcCCCCCccHHHHHHHHHHHH
Confidence 5666788999999999999999999999994 599888888887776665432 22333211 1001234455667
Q ss_pred HhhhhhhhhhhhhHHHHhhccCC-chh-hHHHHHHHHHHHH
Q 013318 361 LGIGDGVLNTQLSALLGILFKHD-TEG-AFAQLKVWQCASI 399 (445)
Q Consensus 361 ~G~~~~~~~~~~~~~l~~~~~~~-~~~-a~~~~~~~~~~g~ 399 (445)
++++....+....++.+++.+|+ +++ ..+.-+.+.++|.
T Consensus 116 ~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~ 156 (473)
T PRK10429 116 WGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAG 156 (473)
T ss_pred HHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 78888888888889999998544 333 4555455555553
No 234
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.97 E-value=2.4e-05 Score=78.23 Aligned_cols=121 Identities=18% Similarity=0.264 Sum_probs=91.1
Q ss_pred HhhhhHHHHHHHhCcchhhhhhhHHHHH-HHHHhhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCcc
Q 013318 74 CFSLVASLVVRVLGSKNALILGTTGYWL-FVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEG 152 (445)
Q Consensus 74 i~~l~~g~l~dr~G~k~~l~~g~~~~~~-~~~~~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~ 152 (445)
..-++++++++|+|+-+++.+|+++... ++.....+|++..++.-+++|+..+.+|.+..+|++..+ ||
T Consensus 421 ~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~va----------Pp 490 (618)
T KOG3762|consen 421 LFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVA----------PP 490 (618)
T ss_pred HHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhC----------CC
Confidence 3445788999999999999999988766 444456789999999999999999999999999999998 56
Q ss_pred chhhhhhhHHHHHH-HHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH
Q 013318 153 TVIGSFNGEFWGMF-ASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM 216 (445)
Q Consensus 153 ~~rg~~~g~~~~~~-~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~ 216 (445)
+-|..+-|+....+ ++|--+|.+|++.+..... - +..|.++++.+++..++.
T Consensus 491 ~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-----------~-~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 491 GLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-----------A-RTTFRIFGIACLVTLALF 543 (618)
T ss_pred cchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-----------h-HHHHHHHHHHHHHHHHHH
Confidence 77778778776554 6777778888776654432 2 344556665555444433
No 235
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.95 E-value=3e-05 Score=74.42 Aligned_cols=111 Identities=14% Similarity=0.154 Sum_probs=78.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHH-HHHHHhhhhhhhh
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLI-MAALLGIGDGVLN 369 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~~~~~~~ 369 (445)
..|++-+.+++.+.+.++.+|.++||.|||. ++..|++..++..+ .|.-+.. ...++ .-++.|+..+-.
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkp-vll~c~~~va~s~l----l~~~S~~----F~afv~aR~l~Gi~kgnl- 138 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKP-VLLACLIGVALSYL----LWALSRN----FAAFVLARFLGGIFKGNL- 138 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCchH-HHHHHHHHHHHHHH----HHHHHHH----HHHHHHHHHhhhhccCch-
Confidence 5788899999999999999999999999885 66677666555432 2322221 12333 366777765544
Q ss_pred hhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcchhH
Q 013318 370 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYISL 411 (445)
Q Consensus 370 ~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~~~~ 411 (445)
..+.++++|+++++ ++.+++..+.-.++|..+|+.+++++..
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 57789999999765 4457887777777888888777766544
No 236
>PRK11462 putative transporter; Provisional
Probab=97.93 E-value=0.00027 Score=72.16 Aligned_cols=115 Identities=23% Similarity=0.165 Sum_probs=80.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccC----CCCccchHhHHHHHHHHHHHHHHhhccCCCCccc-hhHHHHHHHH
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG-TLYPLIMAAL 360 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~----~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 360 (445)
+++...+|.++.+.-+..++..++.|+++|| +|||++.++.|.+..++++.+ +.+.|+.+..+ ....++.+.+
T Consensus 41 Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~l--lf~~p~~s~~~~~~y~~~~~~~ 118 (460)
T PRK11462 41 GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVL--AYSTPDLSMNGKMIYAAITYTL 118 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHH--HHhCCCCCcchHHHHHHHHHHH
Confidence 5666678999999999999999999999997 588888888887766665432 22333211100 1234556777
Q ss_pred HhhhhhhhhhhhhHHHHhhccCCch--hhHHHHHHHHHHHHHHH
Q 013318 361 LGIGDGVLNTQLSALLGILFKHDTE--GAFAQLKVWQCASIAVV 402 (445)
Q Consensus 361 ~G~~~~~~~~~~~~~l~~~~~~~~~--~a~~~~~~~~~~g~~ig 402 (445)
+.++..+.+....++.+++.+|.++ +..+....+..+|..++
T Consensus 119 ~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~ 162 (460)
T PRK11462 119 LTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLS 162 (460)
T ss_pred HHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888999999976533 35666666666665444
No 237
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.92 E-value=9.7e-05 Score=76.59 Aligned_cols=130 Identities=13% Similarity=0.135 Sum_probs=94.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhh
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 370 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 370 (445)
+.+.+.+...+++.+++++.|+++|++|||+.+ ..+.+...++.+ ....+++ ...+.+.-++.|+|.+....
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l-~~~~~~~~iG~i--i~~~a~~-----~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL-LLAVVLFLIGAI--IIALAPS-----WYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHH--HHHHhhh-----HHHHHHHHHHhccchhhhhh
Confidence 347888999999999999999999999999854 566666655543 2334433 35788899999999999998
Q ss_pred hhhHHHHhhccCCchhh-HHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHHHHHHHH
Q 013318 371 QLSALLGILFKHDTEGA-FAQLKVWQCASIAVVFFIGPYI-----SLQAMLIVMVVGICVALVG 428 (445)
Q Consensus 371 ~~~~~l~~~~~~~~~~a-~~~~~~~~~~g~~ig~~i~~~~-----~~~~~~~i~~~~~~~~~~~ 428 (445)
..+.+++|+.|++.|.. .+.++.....|..+++.++... ++...+.+..+.+++-.+.
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999875554 5677777778888887666433 3444444444444444443
No 238
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.87 E-value=0.00017 Score=72.51 Aligned_cols=143 Identities=21% Similarity=0.135 Sum_probs=93.9
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhhccccCCCC-ccchHhHHHHHHHHHHH-HHHhhccCCCCccchhHHHHHHHHHh
Q 013318 285 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPS-ITFIVSGGAIAQVVVFL-WILINYSVTSGVLGTLYPLIMAALLG 362 (445)
Q Consensus 285 ~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~-~~~~i~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G 362 (445)
.+-+.+-.|.+.+...++.+++++.+|+.+.|.++ |+++ +.|.++++++-+ +..+.+.++.. ..+++++-++.|
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl-i~s~ii~~~g~llY~~l~~~~~~~---~y~mL~~R~l~G 141 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL-IVSFLIAIIGNLLYLALAYVPNGV---KYLMLVARILTG 141 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH-HHHHHHHHHHHHHHHHHHhcccch---HHHHHHHHHHcC
Confidence 33344567899999999999999999999999875 5555 466665555432 21233444422 256888999999
Q ss_pred hhhhhhhhhhhHHHHhhc-cCCchhhHHHHHHHHHHHHHHHHHhhcc-----------------hhHHHHHHHHHHHHHH
Q 013318 363 IGDGVLNTQLSALLGILF-KHDTEGAFAQLKVWQCASIAVVFFIGPY-----------------ISLQAMLIVMVVGICV 424 (445)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~-~~~~~~a~~~~~~~~~~g~~ig~~i~~~-----------------~~~~~~~~i~~~~~~~ 424 (445)
+|.+.. ..+-+++++.. ++||.+|++.....+.+|..+|+.+++. .-+...-++.+.++++
T Consensus 142 vg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~ 220 (488)
T KOG2325|consen 142 VGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWII 220 (488)
T ss_pred cCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHH
Confidence 986655 45667777753 5667778777666666666665544321 1245566777777777
Q ss_pred HHHHHHHH
Q 013318 425 ALVGILFL 432 (445)
Q Consensus 425 ~~~~~~~~ 432 (445)
.++...+.
T Consensus 221 ~~v~i~~~ 228 (488)
T KOG2325|consen 221 YIVIILFF 228 (488)
T ss_pred HHHHHHhh
Confidence 77666554
No 239
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.86 E-value=0.00016 Score=75.03 Aligned_cols=131 Identities=13% Similarity=0.044 Sum_probs=87.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhh
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 370 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 370 (445)
...+..+++-++.++|++++|.++||+|||. +++.+.++..++-+ ...+.++ +...++.-++-|++.+....
T Consensus 119 ~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~-~~~~~~~~~~i~~~--~~a~a~~-----~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 119 LVALGQSLFFLGVLVGSLIFGPLSDRFGRKP-VLLVSLLLFIIFGI--LTAFAPN-----YWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhheehHhhcccHH-HHHHHHHHHHHHHH--HHHHhCc-----HHHHHHHHHHHHhhccchhH
Confidence 4556678899999999999999999999987 45677666655432 3345544 35678889999999999999
Q ss_pred hhhHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHHHHHHH
Q 013318 371 QLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGPYI--SLQAMLIVMVVGICVALVGIL 430 (445)
Q Consensus 371 ~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~~~~--~~~~~~~i~~~~~~~~~~~~~ 430 (445)
..+.+.+|+++++.|. +..+ ......+..++.....++ ++.+..++......+.++.++
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~ 252 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWF 252 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999776554 4444 333333333333222222 455555555555554444433
No 240
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.84 E-value=0.041 Score=56.26 Aligned_cols=281 Identities=15% Similarity=0.101 Sum_probs=137.6
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhhhccC-CCCchHHHHHHHH---HHHHhhhhHHHHHHHhCcchhhhhhhHHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTE-GNLGTISLGILYT---SFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~-~~~g~~~~~~~~~---~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~ 100 (445)
.+++.++.+++.++|+...|...-.+-+.+-.+ .+-..+..--.+. ...+..+...++.+|++++++.-+....+.
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~ 100 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFL 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 577888899999999888887666655544322 2222222211222 222344568899999999998877766655
Q ss_pred HHHHHh---hhcchhh-----------HHhHHHHhhh-hhHHhhhhh------------------hhHHHHhhhhhhhcc
Q 013318 101 LFVAAN---LFPSWYT-----------MVPASLYLGF-AASIIWVGE------------------GTYLTAAALSHASNH 147 (445)
Q Consensus 101 ~~~~~~---~~~~~~~-----------li~~r~l~Gi-g~g~~~~~~------------------~~~i~~~~~~~~~~~ 147 (445)
.+.+.+ .+|+-.. ....+.+.|. ..--.|+.. -.+.++..
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~it------- 173 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEIT------- 173 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------
Confidence 443322 2332000 0000111110 000011111 12233333
Q ss_pred CCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH---HhccC---
Q 013318 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM---CFLRK--- 221 (445)
Q Consensus 148 ~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~---~~l~~--- 221 (445)
..+|-.|.++++..+.++|.++++.+...+..+... ..+.+...|...+...+.++.+.+.++. ..+.+
T Consensus 174 ---t~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl 248 (491)
T PF03219_consen 174 ---TVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRK--SLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVL 248 (491)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 466788999999999999999888776666541100 0001223454333333333333333322 22321
Q ss_pred --CcccCcccccccchhhhhHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH----hhhcccccccccc-cchhHH
Q 013318 222 --EEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW----AEFTKEIVTPALG-VSGVGG 294 (445)
Q Consensus 222 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~----~~~~~~~~~~~~~-~~~~g~ 294 (445)
|+..+ ++..+++++++.+.++. ..-++|+|....+..+....|++....- ...-..+.++ -. .+..|-
T Consensus 249 ~~~~~~~-~~~~~kk~k~k~s~~es---~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~-~~ysafmG~ 323 (491)
T PF03219_consen 249 TDPRFYP-SAKKKKKKKPKMSLKES---FKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDP-NDYSAFMGK 323 (491)
T ss_pred Cccccch-hhhcccccCCCccHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-hHHHHHHHH
Confidence 11100 01011111112233332 2335677777777666666666554331 1111111111 11 123455
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCccc
Q 013318 295 AMAVYGAFDAICSLAAGRLTTGLPSITF 322 (445)
Q Consensus 295 ~~~~~~i~~~~g~~~~G~l~d~~g~~~~ 322 (445)
.....|+...+..++.+++.+|+|.+..
T Consensus 324 ~~~~tGivtii~~~l~~~iir~~GW~~~ 351 (491)
T PF03219_consen 324 FSSWTGIVTIIMMFLSSNIIRRFGWRTA 351 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 5566677777777788899999986653
No 241
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.83 E-value=0.00026 Score=68.79 Aligned_cols=116 Identities=17% Similarity=0.099 Sum_probs=87.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+++..+.+++...+-.+..+.++..|++.||+|.|+. +..|+.+++++.. +.|+... ...+...+...++.|.|.
T Consensus 44 ~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~g-i~lgL~l~avg~~---lF~pAa~-~~~y~~FL~~lFila~Gi 118 (422)
T COG0738 44 DLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAG-IVLGLLLYAVGAA---LFWPAAS-SKSYGFFLVALFILASGI 118 (422)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHH-HHHHHHHHHHHHH---HHhhhhh-hhhHHHHHHHHHHHHhhh
Confidence 3555678888888889999999999999999999875 4688888887643 2343211 111456677788899999
Q ss_pred hhhhhhhhHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhh
Q 013318 366 GVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~ 406 (445)
+..++..+++++.+.|++.++ -....+.+..+|+.+++.+.
T Consensus 119 ~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 119 GLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred HHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 999999999999999876443 35677777778877776554
No 242
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.82 E-value=0.0001 Score=74.86 Aligned_cols=141 Identities=11% Similarity=0.116 Sum_probs=101.9
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhh
Q 013318 288 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV 367 (445)
Q Consensus 288 ~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 367 (445)
+.++.++++..+..|.+++.+..|++.||+|.|+.+ ..+.++.+++-++... ..+.+ ...++++-++.|++.+.
T Consensus 71 s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~-~~~~~~sa~~t~l~P~--aa~~~---~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 71 SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF-FISGLISALLTLLTPL--AASIG---FYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH-HHHHHHHHHHHHHHHH--HHHhc---chhhHHHHHHhHHHHhH
Confidence 445788999999999999999999999999999844 4554444433222222 11111 13567889999999999
Q ss_pred hhhhhhHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHhhc-----chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 368 LNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP-----YISLQAMLIVMVVGICVALVGILFLTI 434 (445)
Q Consensus 368 ~~~~~~~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~i~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~ 434 (445)
..|.+..++++-.|.+++ ...++...+..+|..++.-+++ ..+....+|+.+++.++-.+.++....
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999986544 4567766666777766544443 356788999999988888877766544
No 243
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.78 E-value=0.055 Score=54.42 Aligned_cols=127 Identities=13% Similarity=0.004 Sum_probs=72.1
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHH-hhccCCCC--ccchhHHH
Q 013318 279 TKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSG--VLGTLYPL 355 (445)
Q Consensus 279 ~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~ 355 (445)
..+...++++...+|..-....+..+.|.+...++.+|+|..+.- ..+.....+++.+.. ..|.+..+ ......++
T Consensus 282 t~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G-~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~ 360 (432)
T PF06963_consen 282 TAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG-LWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLL 360 (432)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhH-HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHH
Confidence 334455678878889888888899999999999999999965532 344454444432221 12333321 11011222
Q ss_pred HHHHHHhhhhhhhhhhhhHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhh
Q 013318 356 IMAALLGIGDGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 356 ~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~ 406 (445)
...++-=+|--.+.-...-++.|..|++++. ..|+-+..|++-..+.+...
T Consensus 361 ~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 361 GGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222223334455777878876554 56777777776665555443
No 244
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.76 E-value=0.0005 Score=63.72 Aligned_cols=124 Identities=15% Similarity=0.048 Sum_probs=79.6
Q ss_pred hhhcccccc-cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHH
Q 013318 276 AEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYP 354 (445)
Q Consensus 276 ~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (445)
+.|.+.+.+ .+++.++...+.....++..+ +++.|.+.|+.|.+. ++.+|.+...+++.+..+...........+.+
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~-~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~ 99 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWV-VLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLM 99 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHH-HHHHHHHHHHHHHHHHHHHHhCccCccchHHH
Confidence 455555533 355666777777777777766 488899999999875 55788888777764332222221110112334
Q ss_pred HHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHH
Q 013318 355 LIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAV 401 (445)
Q Consensus 355 ~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~i 401 (445)
.+..++-|.+.+..++.......+.||++|+.+.|+...+..+++++
T Consensus 100 ~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai 146 (250)
T PF06813_consen 100 CLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAI 146 (250)
T ss_pred HHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHH
Confidence 44445555665555665555555789999999999888888888765
No 245
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.00033 Score=72.02 Aligned_cols=144 Identities=13% Similarity=0.071 Sum_probs=102.5
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCch----HHHHHHHHHHHHhhhhHHHHHHHhCcc--hhhhhhhHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSK--NALILGTTGYWL 101 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~----~~~~~~~~~~ai~~l~~g~l~dr~G~k--~~l~~g~~~~~~ 101 (445)
+.++.+.++..+...+|.......|...++.+... ...+++-....++.+..|++.|+...| ....++.+..++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 45566777777777777766655555444433333 335555566677888999999998843 344444444444
Q ss_pred HHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 102 FVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 102 ~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
..... +.+++..++...++.|+..|....-...++.+.. ..++-..++|+...+..++..+||+++..+
T Consensus 378 ~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~----------g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~ 447 (509)
T KOG2504|consen 378 ARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLV----------GLEKLSNAYGLLLLFQGIGALVGPPIAGLL 447 (509)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------ChhhcchHHHHHHHHhHHHHHcCcccceee
Confidence 44332 5788889999999999999988877766777775 467888999999999999999999988754
Q ss_pred h
Q 013318 181 L 181 (445)
Q Consensus 181 ~ 181 (445)
.
T Consensus 448 ~ 448 (509)
T KOG2504|consen 448 Y 448 (509)
T ss_pred e
Confidence 3
No 246
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.70 E-value=0.00034 Score=68.96 Aligned_cols=113 Identities=18% Similarity=0.035 Sum_probs=71.3
Q ss_pred chhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhh
Q 013318 290 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 369 (445)
Q Consensus 290 ~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 369 (445)
...+.+.+.-.++.++|++++|++.||+|||+ +.-..+++..++-+.+-+....++..--...+...-+++|+|.+.=.
T Consensus 84 ~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~-vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDY 162 (538)
T KOG0252|consen 84 GVLALVNAAALVGTIFGQLFFGWLGDKFGRKK-VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDY 162 (538)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh-hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCC
Confidence 35678888899999999999999999999987 33334444333322111222222110001335567788999999988
Q ss_pred hhhhHHHHhhccCCchhh-----HHHHHHHHHHHHHHHH
Q 013318 370 TQLSALLGILFKHDTEGA-----FAQLKVWQCASIAVVF 403 (445)
Q Consensus 370 ~~~~~~l~~~~~~~~~~a-----~~~~~~~~~~g~~ig~ 403 (445)
|..-++.+|...++++++ +++..+....|..++.
T Consensus 163 PlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~ 201 (538)
T KOG0252|consen 163 PLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVAL 201 (538)
T ss_pred cchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHH
Confidence 988889999887665543 3444444444444443
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.63 E-value=0.00069 Score=68.11 Aligned_cols=186 Identities=13% Similarity=0.107 Sum_probs=119.1
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccccccccccc--hhHHHHHHHHHHHHHHHhhhhccccCCCCcc
Q 013318 244 LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSIT 321 (445)
Q Consensus 244 ~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~--~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~ 321 (445)
.++...+++.+++..+.++..+..|...++..+.+ +++.++++.. -.|.+.+..-.+.++.-++.+|+.+|+|+-+
T Consensus 360 v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFL--fWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~ 437 (618)
T KOG3762|consen 360 VLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFL--FWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVN 437 (618)
T ss_pred HHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHH--HHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccc
Confidence 34455577888877665554455555444332211 1222223321 2344445566667777778899999999876
Q ss_pred chHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCch-hhHHH-----HHHHH
Q 013318 322 FIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-----LKVWQ 395 (445)
Q Consensus 322 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~-~a~~~-----~~~~~ 395 (445)
++..|+.+...=++ ++++..++ +..+-+=++-|+..+..+..+-+++++..|++.+ ++-++ +.+..
T Consensus 438 -v~~lgLa~~~~Rf~--~~S~L~n~-----W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~ 509 (618)
T KOG3762|consen 438 -VMYLGLACNVGRFL--YYSYLQNP-----WMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGK 509 (618)
T ss_pred -eeeehhhHHHHHHH--HHHHhcCc-----hheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCc
Confidence 44677666665543 34555443 4555666778888888888888999999998744 44443 33344
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013318 396 CASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKA 439 (445)
Q Consensus 396 ~~g~~ig~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 439 (445)
++|+.||-.+..+++....+.++++.|++.++.+..+.+..+|+
T Consensus 510 g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l~~~ 553 (618)
T KOG3762|consen 510 GLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLLLKRR 553 (618)
T ss_pred chhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 67778877777777878888887887777777777776666554
No 248
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.62 E-value=0.00061 Score=68.95 Aligned_cols=108 Identities=15% Similarity=0.159 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhh
Q 013318 294 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS 373 (445)
Q Consensus 294 ~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 373 (445)
.+.+.+.++.++|+++.|.+.||+|||..++ ...++..++-+........+. +-++.+.-++.|+..+......+
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~-~~~~l~~~~~~~~~~s~~~~~----~e~li~GR~i~Gl~~gl~~~~~p 138 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALL-LSNLLAVLAALLMGLSKSAPS----FEMLILGRLIVGLACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHhHHHHHHHH
Confidence 4456888999999999999999999997543 443333322111122222111 23566788899999999888999
Q ss_pred HHHHhhccCCchhhHH-HHHHHHHHHHHHHHHhh
Q 013318 374 ALLGILFKHDTEGAFA-QLKVWQCASIAVVFFIG 406 (445)
Q Consensus 374 ~~l~~~~~~~~~~a~~-~~~~~~~~g~~ig~~i~ 406 (445)
-++.|..|++.|+..| +.+....+|..++..++
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~ 172 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILLGQVLG 172 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999776555 56666667777775444
No 249
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.60 E-value=0.00082 Score=68.80 Aligned_cols=117 Identities=10% Similarity=-0.042 Sum_probs=85.5
Q ss_pred CCCchHHHHHHHHHH----HHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh--h---------hcchhhHHhHHHHhh
Q 013318 58 GNLGTISLGILYTSF----TCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--L---------FPSWYTMVPASLYLG 122 (445)
Q Consensus 58 ~~~g~~~~~~~~~~~----ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~--~---------~~~~~~li~~r~l~G 122 (445)
.+.+....+..+... .++....+++.+|++.|+++.++.++..+..... . .++...++...++.+
T Consensus 283 lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~ 362 (468)
T TIGR00788 283 LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAE 362 (468)
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHH
Confidence 344444444444433 3455667788889999999999988766544221 1 133334555678999
Q ss_pred hhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCc
Q 013318 123 FAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (445)
Q Consensus 123 ig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~ 184 (445)
++.+..+.....++.+.. |++.+|..++++.+..++|..+|+.++..+....
T Consensus 363 ~~~g~~~~~~~~~~~~~~----------p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 363 VLAQLKFMPFLVLLARLC----------PSGCESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHccHHHHHHHhC----------CCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999887 5788999999999999999999998888776543
No 250
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.57 E-value=0.018 Score=55.11 Aligned_cols=331 Identities=16% Similarity=0.154 Sum_probs=169.3
Q ss_pred hhHHHHHHHhCcchhhhhhhH-HHHHHHHHhhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchh
Q 013318 77 LVASLVVRVLGSKNALILGTT-GYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVI 155 (445)
Q Consensus 77 l~~g~l~dr~G~k~~l~~g~~-~~~~~~~~~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~r 155 (445)
++.=.+.|-.-.|+++++-.+ ...+.....+.++...+=+.-++-|...+... +-.+|+=. +.+|+++
T Consensus 60 vpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEI-AYysYIYs----------~Vd~~~Y 128 (433)
T KOG3810|consen 60 VPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEI-AYYSYIYS----------KVDPEMY 128 (433)
T ss_pred HHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHH-hhhheeee----------ecCHHHH
Confidence 344468899999998887654 33444444455666655556677777654322 22333322 2357888
Q ss_pred hhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHhccCCccc----Cccc--
Q 013318 156 GSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEKE-- 229 (445)
Q Consensus 156 g~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~~~l~~~~~~----~~~~-- 229 (445)
.++.|..-+..-.|-..|..++-.+..... .+....-+ +-.....++.++.+|+|.+++. ++++
T Consensus 129 qrvt~y~RaA~L~g~~~g~vlaQlLvs~~~---------~sy~~LN~-ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~ 198 (433)
T KOG3810|consen 129 KRVTGYCRAAFLVGKFVGSVLAQLLVSLET---------LSYTTLNY-ISLAEVTIAVLLALFLPRVKRSLYFHRLEDKI 198 (433)
T ss_pred HHHHHHhHHHHHHHhHHHhHHHHHHhhhcc---------cchhhhch-hhHHHHHHHHHHHhhCCCCchhhhhhcccccc
Confidence 899998888777777777777665543211 12222223 3334445666777888876532 1111
Q ss_pred ----cccc-chhhhhH-----HHHHHHHHHHhhccchhHH--HHHHHHHHHHHHHHHHhhhcccc-ccccccc--chhHH
Q 013318 230 ----TADA-SVNFYSY-----LVSLSKSITTLLADVRMLL--IIPLFAYSGLQQAFVWAEFTKEI-VTPALGV--SGVGG 294 (445)
Q Consensus 230 ----~~~~-~~~~~~~-----~~~~~~~~~~~l~~~~~~~--l~~~~~~~g~~~~f~~~~~~~~~-~~~~~~~--~~~g~ 294 (445)
.++. +..+..+ .....++..+..++|+.+. +.-.+-.+|+.+ ...|.+.+ .+-.-+. ..-|.
T Consensus 199 ~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~Q---V~nY~Q~LW~~~~~~~~~vyNG~ 275 (433)
T KOG3810|consen 199 SVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQ---VTNYTQILWKEVAPNPANVYNGA 275 (433)
T ss_pred eeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHH---HHHHHHHHHHhhCCCchhhhcCH
Confidence 0000 0000111 1112234445567777643 332333344432 11122111 0000011 12344
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCc-cchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhh
Q 013318 295 AMAVYGAFDAICSLAAGRLTTGLPSI-TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS 373 (445)
Q Consensus 295 ~~~~~~i~~~~g~~~~G~l~d~~g~~-~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 373 (445)
+-++..+..+++.+..|.+.-...|. ..++..+....+.+.. .+.++++ .++.++.+.++........+...
T Consensus 276 veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf--~m~~t~~-----Iw~~Ya~yvlfr~~y~l~itiA~ 348 (433)
T KOG3810|consen 276 VEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLF--IMAQTQH-----IWVCYAGYVLFRVIYQLTITIAT 348 (433)
T ss_pred HHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhh--hhhcccc-----eehhhhhHHHHHhhHhhhhhHHH
Confidence 55566666678888888876433332 3344555555444322 2344443 25677888888776666666655
Q ss_pred HHHHhhccCCch-hhHHHHHHHHHHHHHHHHH--hh---------cc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013318 374 ALLGILFKHDTE-GAFAQLKVWQCASIAVVFF--IG---------PY-ISLQAMLIVMVVGICVALVGILFLTIQVEK 438 (445)
Q Consensus 374 ~~l~~~~~~~~~-~a~~~~~~~~~~g~~ig~~--i~---------~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 438 (445)
.-++....+++- -.||+..++.-+-..+-.+ ++ ++ .-+...+.+++++.++++.......+|.++
T Consensus 349 ~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~~~~ 426 (433)
T KOG3810|consen 349 FQIARNLSSELFGLVFGINTFVALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCRRNKV 426 (433)
T ss_pred HHHHHhhhhhhheeeeehHHHHHHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 555555544433 3688877765443333221 11 11 234556677777777776654434433333
No 251
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.52 E-value=0.003 Score=59.11 Aligned_cols=110 Identities=19% Similarity=0.118 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHH-hhhc--chhhHHhHHHHhhhhhHHhhhhhhhHHHHhh
Q 013318 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (445)
Q Consensus 64 ~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~-~~~~--~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~ 140 (445)
..+.......+++++.|.+.||+|||+.+..+.......... ...+ +...++..|+.+|++.+..++....++.+..
T Consensus 44 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 123 (338)
T COG0477 44 LLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWF 123 (338)
T ss_pred HHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 344455556667789999999999998888887653333222 2333 4788888999999999999999999999887
Q ss_pred hhhhhccCCCcc-chhhhhhhHHHH-HHHHhhhhhhHHHHHhhcC
Q 013318 141 LSHASNHKLHEG-TVIGSFNGEFWG-MFASHQFVGNLITLAVLKD 183 (445)
Q Consensus 141 ~~~~~~~~~~~~-~~rg~~~g~~~~-~~~lg~~iG~li~~~l~~~ 183 (445)
+ + ++|+...+.... ....|..+|+.++..+...
T Consensus 124 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 124 P----------EATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred C----------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3 478888888887 5777888888766655433
No 252
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.49 E-value=0.0027 Score=61.07 Aligned_cols=138 Identities=16% Similarity=0.005 Sum_probs=103.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhh
Q 013318 286 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 365 (445)
Q Consensus 286 ~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 365 (445)
+++.+..|+..+.+-++-.+.+++..++.+|+|.++. +..++++..++.. .-.+. + ...++....+.|.+.
T Consensus 43 gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~-l~~~Llli~~G~~--iR~~~-~-----~~~L~~gt~l~G~gI 113 (395)
T COG2807 43 GLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERS-LFLALLLIAAGIL--IRSLG-G-----LPLLFLGTLLAGAGI 113 (395)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHH-HHHHHHHHHHHHH--HHhcc-c-----HHHHHHHHHHHHhhH
Confidence 4555678999999999999999999999999998874 4566555444432 22222 1 245777888999999
Q ss_pred hhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhhcc----h-hHHHHHHHHHHHHHHHHHHHHHH
Q 013318 366 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY----I-SLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~~~----~-~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
+..|..++.++-+.||++.+...|+|..-.+.|++.+...+.. . +.+..+..-+...+++++.++..
T Consensus 114 av~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 114 AVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred HHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999988777888888888877776655532 2 45666777777777777777665
No 253
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.48 E-value=0.0032 Score=61.70 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=85.3
Q ss_pred HHHHhhhhccccCCC-----CccchHhHHHHHHHHHHHHHH---hhccC-----C-CCccchhHHHHHHHHHhhhhhhhh
Q 013318 304 AICSLAAGRLTTGLP-----SITFIVSGGAIAQVVVFLWIL---INYSV-----T-SGVLGTLYPLIMAALLGIGDGVLN 369 (445)
Q Consensus 304 ~~g~~~~G~l~d~~g-----~~~~~i~~g~~~~~~~~~~~~---~~~~~-----~-~~~~~~~~~~~~~~l~G~~~~~~~ 369 (445)
...++.+|+.+|+-+ ||.+.++.|.++...+..... ..... + +...+.....+.+.++|+|.+..+
T Consensus 28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~ 107 (403)
T PF03209_consen 28 APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASG 107 (403)
T ss_pred HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence 356889999999988 888888888876555432111 11111 1 111222345677888999999999
Q ss_pred hhhhHHHHhhccCCchh-hHHHHHHHHHHHHHHHH-----HhhcchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013318 370 TQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVF-----FIGPYISL---QAMLIVMVVGICVALVGILFLTIQVEKAF 440 (445)
Q Consensus 370 ~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~-----~i~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 440 (445)
+...+++.|..|+|+++ +.++......+|..++. .++++-.. .+.-....+...+.++..+..|+|.++++
T Consensus 108 T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~ 187 (403)
T PF03209_consen 108 TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRA 187 (403)
T ss_pred HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccc
Confidence 99999999999887654 66766666566665543 34443221 12223333444555666667777765554
No 254
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.43 E-value=0.043 Score=54.36 Aligned_cols=92 Identities=12% Similarity=0.022 Sum_probs=50.9
Q ss_pred HhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh-hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCcc
Q 013318 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEG 152 (445)
Q Consensus 74 i~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~ 152 (445)
+..+.+|+..+|...+.=...+.++..+..+.. +.++...=+++-++.+++.|.--.....+.. .. +
T Consensus 74 ~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y-----------~ 141 (402)
T PF02487_consen 74 LVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY-----------G 141 (402)
T ss_pred HHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc-----------C
Confidence 456789999999886555555555544444432 4566655555556666666654333333322 21 1
Q ss_pred chhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 153 TVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 153 ~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
+ ...+-+.++.+.++++|++.-..+
T Consensus 142 ~---~~l~~wssGTG~aGl~Ga~~y~~l 166 (402)
T PF02487_consen 142 K---SSLSAWSSGTGGAGLVGALYYLGL 166 (402)
T ss_pred c---cccccccCCcChhhHHHHHHHHHH
Confidence 1 234545555666777777554433
No 255
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.12 E-value=0.005 Score=65.33 Aligned_cols=140 Identities=16% Similarity=0.151 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHhhhhccccCC-CCccchHhHHHHHHHHHHHHHHhhccCCCC---ccchhHHHHHHHHHhhhhhhhh
Q 013318 294 GAMAVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSG---VLGTLYPLIMAALLGIGDGVLN 369 (445)
Q Consensus 294 ~~~~~~~i~~~~g~~~~G~l~d~~-g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~~~~~~ 369 (445)
.+...+....-+..+++|++.|+. |+++. +..+.++..++.++ +...+.+. .......++..++.++|.+...
T Consensus 27 ~i~~~f~~l~yl~pilGg~iAD~~lG~~~t-Il~~~ii~~lG~~l--lai~a~~~~~~~~~~~~~l~gLaLia~G~GgiK 103 (654)
T TIGR00926 27 VLFHTFTYLCYLTPLIGAIIADGWLGKFKT-ILYLSIVYVVGHAL--LSFGAIPSSGHPLHDLLDLLGLALIALGTGGIK 103 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHH--HHhccCcccccchHHHHHHHHHHHHHhhccccc
Confidence 334444444456667788999885 66654 45666666665432 22221111 0001235566777888899999
Q ss_pred hhhhHHHHhhccCC-ch---hhHHHHHHHHHHHHHHHHHhhcch-----------hHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 370 TQLSALLGILFKHD-TE---GAFAQLKVWQCASIAVVFFIGPYI-----------SLQAMLIVMVVGICVALVGILFLTI 434 (445)
Q Consensus 370 ~~~~~~l~~~~~~~-~~---~a~~~~~~~~~~g~~ig~~i~~~~-----------~~~~~~~i~~~~~~~~~~~~~~~~~ 434 (445)
|...+..++.++++ ++ +.|.++....++|+.++..+.++. ++...+.+.+++.+++++.+..-.+
T Consensus 104 p~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 104 PCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred cCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999653 22 256777777778887776665443 3566778888888888777765444
Q ss_pred HH
Q 013318 435 QV 436 (445)
Q Consensus 435 ~~ 436 (445)
++
T Consensus 184 ~y 185 (654)
T TIGR00926 184 MY 185 (654)
T ss_pred cc
Confidence 43
No 256
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.10 E-value=0.0014 Score=49.01 Aligned_cols=51 Identities=16% Similarity=0.073 Sum_probs=41.9
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhH
Q 013318 276 AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG 326 (445)
Q Consensus 276 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~ 326 (445)
+.++.++.+.+++..++|.+.++..+...++++++|++.||.++++.++..
T Consensus 21 Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 21 PFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred hhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 445555556788888999999999999999999999999999988755433
No 257
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.02 E-value=0.016 Score=61.48 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=80.3
Q ss_pred HhhhhHHHHHH-HhCcchhhhhhhHHHHHHHHHh-hh--cc------hhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhh
Q 013318 74 CFSLVASLVVR-VLGSKNALILGTTGYWLFVAAN-LF--PS------WYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (445)
Q Consensus 74 i~~l~~g~l~d-r~G~k~~l~~g~~~~~~~~~~~-~~--~~------~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~ 143 (445)
+..++.|.+.| ++|+++++.++.+++.+..+.. .. +. ....+.+=++..+|.|+.=+...+...+-.++
T Consensus 38 l~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~- 116 (654)
T TIGR00926 38 LTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE- 116 (654)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc-
Confidence 45667889999 5999999999998776644322 21 11 12233444667778888888878777776531
Q ss_pred hhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH
Q 013318 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM 216 (445)
Q Consensus 144 ~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~ 216 (445)
.++++|-+++.+++.+.++|..++.++...+..... |- ....+|. ..|.+.++++++++++.
T Consensus 117 ------~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~-~f---g~~~~~~-~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 117 ------RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVG-CF---GCQDCYP-LAFGVPAILMILALIVF 178 (654)
T ss_pred ------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cc---ccCcchH-HHHHHHHHHHHHHHHHH
Confidence 012346777888888888888888877666542211 00 0013453 34555566565555544
No 258
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.92 E-value=0.057 Score=52.23 Aligned_cols=87 Identities=15% Similarity=-0.023 Sum_probs=59.7
Q ss_pred ccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhh
Q 013318 284 TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 363 (445)
Q Consensus 284 ~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 363 (445)
+.++..++++..+...-..+++...+.|.+.||+|||+.- +.-.+++.++.+. ...++ +.++++.-++-|+
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c-l~~cily~~scl~-----k~~~~---~~~L~~GRvlgGi 133 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC-LLFCILYSLSCLT-----KHSSN---YPVLLLGRVLGGI 133 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH-HHHHHHHHHHHHH-----Hhccc---cHHHHHHHHHHHH
Confidence 3466667888888888888899999999999999999844 3444455544321 11222 3567778888899
Q ss_pred hhhhhhhhhh-HHHHhh
Q 013318 364 GDGVLNTQLS-ALLGIL 379 (445)
Q Consensus 364 ~~~~~~~~~~-~~l~~~ 379 (445)
+.+...+.-- +++.|.
T Consensus 134 aTSLLfS~FEsW~V~Eh 150 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEH 150 (354)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 8888776444 455554
No 259
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.91 E-value=0.0038 Score=63.88 Aligned_cols=130 Identities=15% Similarity=-0.013 Sum_probs=89.2
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhh
Q 013318 289 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 368 (445)
Q Consensus 289 ~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 368 (445)
-.+.+.+.+++.++.+++.++.|.+.||++-.+.+...+ ++..+. . .+..+.++ ...+++.-++.|+..++.
T Consensus 80 ~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~-~~w~~~-~-~~~~~~~s-----~~~~ialr~llGl~es~~ 151 (495)
T KOG2533|consen 80 GNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSG-ILWGLF-G-FLTAAVHS-----FPGLIALRFLLGLFESGG 151 (495)
T ss_pred hhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHH-HHHHHH-H-HHHHHHhh-----hHHHHHHHHHHHHHhccc
Confidence 346777888999999999999999999998444222222 222111 1 12223333 245677889999999999
Q ss_pred hhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHhhcc----------hhHHHHHHHHHHHHHHHH
Q 013318 369 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY----------ISLQAMLIVMVVGICVAL 426 (445)
Q Consensus 369 ~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~----------~~~~~~~~i~~~~~~~~~ 426 (445)
.|....+++.-|.++ ++..+|++...+++|..+|.+++.. .++.|.|.+-+++.++..
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHH
Confidence 999999999999765 4457899888887777776666533 256777777666555444
No 260
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.73 E-value=0.12 Score=51.53 Aligned_cols=28 Identities=14% Similarity=0.110 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhhhhccccCCCCccch
Q 013318 296 MAVYGAFDAICSLAAGRLTTGLPSITFI 323 (445)
Q Consensus 296 ~~~~~i~~~~g~~~~G~l~d~~g~~~~~ 323 (445)
+..+.+...+-+....++.||+|.|+++
T Consensus 338 L~ins~~lgi~S~~~~~l~~~~g~r~~y 365 (498)
T KOG0637|consen 338 LMLNSIVLGIYSLLVEKLSRKFGTRKRY 365 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcceEE
Confidence 4567777788888899999999955533
No 261
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.72 E-value=0.0001 Score=74.82 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCC-CccchhHHHHHHHHHhhhhhhhh
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTS-GVLGTLYPLIMAALLGIGDGVLN 369 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~G~~~~~~~ 369 (445)
..+...+...++..+|++++|+++||+|||+.+ ..+.++..++.+ +..+.++. + +..+.+.-++.|++.+...
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~-~~~~~~~~i~~~--~~~~~~~~~~---~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPAL-IISALLMIIGSI--LIAFAPSYNN---FWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccc-cccccccccccc--cccccccccc---ccccccccccccccccccc
Confidence 456777888999999999999999999999754 455555555432 23444411 1 2456677888999999999
Q ss_pred hhhhHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhh
Q 013318 370 TQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 370 ~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~ 406 (445)
+..+.++.|..|++.+. ..+..+....+|..++..+.
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccc
Confidence 99999999999877554 45567776677766655444
No 262
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.33 E-value=0.01 Score=58.78 Aligned_cols=145 Identities=12% Similarity=0.110 Sum_probs=84.6
Q ss_pred HHHHHHHHHHH--HhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccC----CCCccchHhHHHHHHHHHHHH
Q 013318 264 FAYSGLQQAFV--WAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLW 337 (445)
Q Consensus 264 ~~~~g~~~~f~--~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~----~g~~~~~i~~g~~~~~~~~~~ 337 (445)
....|.+.++. .++.++++.+-+..-++.+.+-...-+...+.+++.|..+|| +|||++.+..+....++++.+
T Consensus 39 ~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~L 118 (498)
T KOG0637|consen 39 SIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFL 118 (498)
T ss_pred HHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhh
Confidence 34455554332 344555543222222333333333334456777788999986 689999888877776666542
Q ss_pred HHhhccC--------CCCc--cchh--HHHHHHHHHhhhhhhhhhhhhHHHHhhcc-CCchh-hHHHHHHHHHHHHHHHH
Q 013318 338 ILINYSV--------TSGV--LGTL--YPLIMAALLGIGDGVLNTQLSALLGILFK-HDTEG-AFAQLKVWQCASIAVVF 403 (445)
Q Consensus 338 ~~~~~~~--------~~~~--~~~~--~~~~~~~l~G~~~~~~~~~~~~~l~~~~~-~~~~~-a~~~~~~~~~~g~~ig~ 403 (445)
+.+.+ +..- ...+ +..+..-++=++....+...-+++.|+.. +++.+ |++.+.++.++|..+||
T Consensus 119 --ig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY 196 (498)
T KOG0637|consen 119 --IGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGY 196 (498)
T ss_pred --hhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeee
Confidence 23322 2110 0011 12233333444444556667799999984 44555 89999999999999999
Q ss_pred Hhhcchh
Q 013318 404 FIGPYIS 410 (445)
Q Consensus 404 ~i~~~~~ 410 (445)
...++++
T Consensus 197 ~~g~y~~ 203 (498)
T KOG0637|consen 197 ALGSYLG 203 (498)
T ss_pred ecccccC
Confidence 8876653
No 263
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.11 E-value=0.048 Score=40.64 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHH----HHHHhhhhHHHHHHHhCcchhhhhhhHH
Q 013318 31 HILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYT----SFTCFSLVASLVVRVLGSKNALILGTTG 98 (445)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~----~~ai~~l~~g~l~dr~G~k~~l~~g~~~ 98 (445)
+.+....++.|.+.....+..|...++.+++....+++.+ ...+++++.|.++||+++++.++.....
T Consensus 3 ~~lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 3 LPLKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3445556666666666556666666667787776666555 3456778899999999999988776653
No 264
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.04 E-value=0.029 Score=55.52 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=77.4
Q ss_pred HhHHHHHHHHHHHHH-HhhccCCC-CccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-ch---hhHHHHHHHHHH
Q 013318 324 VSGGAIAQVVVFLWI-LINYSVTS-GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TE---GAFAQLKVWQCA 397 (445)
Q Consensus 324 i~~g~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~---~a~~~~~~~~~~ 397 (445)
+..|.++..++.++. +...++.. +......+++...+.++|.|...|.+.++.+|.++++ .. +.|..+....++
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~ 83 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI 83 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh
Confidence 346666666665421 11222211 0011246777788899999999999999999999765 22 367888888899
Q ss_pred HHHHHHHhhcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013318 398 SIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFLTIQVEKA 439 (445)
Q Consensus 398 g~~ig~~i~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 439 (445)
|+.++....++. ++.+.|.+..+..+++.+.++.-.++++++
T Consensus 84 G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 84 GSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 999998777664 577888888888888888776554444444
No 265
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.83 E-value=0.61 Score=47.57 Aligned_cols=64 Identities=8% Similarity=0.086 Sum_probs=39.0
Q ss_pred hhhHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhhcchh----------------HHHHHHHHHHHHHHHHHHHHHHH
Q 013318 371 QLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGPYIS----------------LQAMLIVMVVGICVALVGILFLT 433 (445)
Q Consensus 371 ~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~~~~~----------------~~~~~~i~~~~~~~~~~~~~~~~ 433 (445)
.-+....|++..++++ -|+++..+.++|..++..+..+++ ....+.+..+++.+...++.+++
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~ 228 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVN 228 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888988766654 589888888888777654443322 11233444445556666666665
Q ss_pred H
Q 013318 434 I 434 (445)
Q Consensus 434 ~ 434 (445)
+
T Consensus 229 ~ 229 (472)
T TIGR00769 229 R 229 (472)
T ss_pred h
Confidence 4
No 266
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.67 E-value=2.9 Score=42.52 Aligned_cols=73 Identities=12% Similarity=0.145 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhc--ccccccccccchhHHHHHHHHHHHHHHHhhhhccc
Q 013318 240 YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT--KEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 314 (445)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~g~~~~f~~~~~~--~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~ 314 (445)
+.++..+.+++.+|-|.+..+.......-+ +|..++=. .-+.+.|+..+..+......--.+++.....||.+
T Consensus 263 ~i~~~Y~~l~~ilkLp~V~~li~ilL~~Ki--gF~a~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~~~~~Kws 337 (544)
T PF13000_consen 263 SIKDVYKSLWKILKLPNVQTLIIILLTAKI--GFQANDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILPYYIGKWS 337 (544)
T ss_pred hHHHHHHHHHHHHcCchHHHHHHHHHHHHh--ccccchhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHHHHhhhhh
Confidence 345666778888888888766554433222 22211111 12346777777666654444444555555555554
No 267
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.98 E-value=0.47 Score=40.62 Aligned_cols=94 Identities=16% Similarity=0.045 Sum_probs=57.7
Q ss_pred HHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhh
Q 013318 300 GAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL 379 (445)
Q Consensus 300 ~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~ 379 (445)
.....+..++.+.+.+++|.|+.+ .+|.+...+-.+ . .+-++ ...++...++.|++.+..++..-.++.+.
T Consensus 47 Y~~~~~s~l~~P~iv~~lg~K~sm-~lg~~~y~~y~~-~--~~~~~-----~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNKLGPKWSM-ILGSLGYAIYIA-S--FFYPN-----SYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHhHHHHHHHHhhHHHH-HHHHHHHHHHHH-H--HHhhh-----HHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 333455666677788889988754 566655543221 1 12222 24678889999999999888877888777
Q ss_pred ccCC-chhhHHHHHHHHHHHHHHH
Q 013318 380 FKHD-TEGAFAQLKVWQCASIAVV 402 (445)
Q Consensus 380 ~~~~-~~~a~~~~~~~~~~g~~ig 402 (445)
.+++ +++-.+++-.+...+..+|
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G 141 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFG 141 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHH
Confidence 6544 3334454444444444444
No 268
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.91 E-value=0.94 Score=45.27 Aligned_cols=116 Identities=13% Similarity=0.023 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCC-CCccchhHHHHHHHHHhhhhhhhh
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT-SGVLGTLYPLIMAALLGIGDGVLN 369 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~~~~~~~ 369 (445)
..-....++.+.++...+.+-|+.||.|-|..+ +++..++.++-..-...-.|. ++.+..-+....-.+-+.+.-...
T Consensus 80 ~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~-llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim 158 (480)
T KOG2563|consen 80 AADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL-LLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFIL 158 (480)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH-HHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhh
Confidence 444556678888888888899999999988754 577777666532111111111 011101123333444344332222
Q ss_pred hhhhHHHHh-hccCC-chhhHHHHHHHHHHHHHHHHHhhcc
Q 013318 370 TQLSALLGI-LFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 408 (445)
Q Consensus 370 ~~~~~~l~~-~~~~~-~~~a~~~~~~~~~~g~~ig~~i~~~ 408 (445)
. +++-+++ -||++ +..|.+.--+...+|.++|+++.|.
T Consensus 159 ~-lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppi 198 (480)
T KOG2563|consen 159 G-LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPI 198 (480)
T ss_pred c-cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccce
Confidence 2 2223334 35554 4456655555666888888877754
No 269
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.81 E-value=0.45 Score=47.26 Aligned_cols=65 Identities=12% Similarity=0.075 Sum_probs=50.9
Q ss_pred hhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 107 LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 107 ~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
+.|+.+.+++.-+..|+-.|..++.....+.+-. ++++|...+|.....-+.|..++++++..+.
T Consensus 331 fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~----------~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 331 FIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEV----------PPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcC----------CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3578888877888999999988876655554432 5789999999999889999999988887653
No 270
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=94.75 E-value=5.4 Score=40.44 Aligned_cols=149 Identities=12% Similarity=0.074 Sum_probs=81.6
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHhhhhhhccC-CCCchHHH---HHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHH
Q 013318 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTE-GNLGTISL---GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (445)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~-~~~g~~~~---~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~ 100 (445)
..++.++-+++.++|+...|...-++-+++... .+-..... -...-+..+..++..++.+++.+.++.-+-...+.
T Consensus 24 ~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~ 103 (509)
T COG3202 24 YELKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFL 103 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 477888899999999888887766665554322 12112211 11111233455677888999999998876665554
Q ss_pred HHHHHh---hhcch----hhHHhHHHHhhhhh---------------------HHhhhh------hhhHHHHhhhhhhhc
Q 013318 101 LFVAAN---LFPSW----YTMVPASLYLGFAA---------------------SIIWVG------EGTYLTAAALSHASN 146 (445)
Q Consensus 101 ~~~~~~---~~~~~----~~li~~r~l~Gig~---------------------g~~~~~------~~~~i~~~~~~~~~~ 146 (445)
.+.+.+ .+|.- +-....|=+++..- +=+|++ -.....|.+
T Consensus 104 ~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeit------ 177 (509)
T COG3202 104 GFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEIT------ 177 (509)
T ss_pred HHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------
Confidence 433332 22210 00001111111111 001211 112223333
Q ss_pred cCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHhhcC
Q 013318 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (445)
Q Consensus 147 ~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l~~~ 183 (445)
..+|-.|.++++..+.+++..+++.+...+..+
T Consensus 178 ----t~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 178 ----TIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred ----hHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 345778899999999999998888777776653
No 271
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=94.74 E-value=0.41 Score=48.75 Aligned_cols=149 Identities=18% Similarity=0.161 Sum_probs=89.8
Q ss_pred cccCcccccchhHHH-HHHHHHHHHHHhhhHhhhhh-hccCCCCchHHHHHHH----HHHHHhhhh-HHHHHHHhCcchh
Q 013318 19 QVLTPKNYTRDVHIL-SCAFLLIFLAYGAAQNLETT-VNTEGNLGTISLGILY----TSFTCFSLV-ASLVVRVLGSKNA 91 (445)
Q Consensus 19 ~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~-i~~~~~~g~~~~~~~~----~~~ai~~l~-~g~l~dr~G~k~~ 91 (445)
+++++.+..|..+.+ ...+++........+-.... +....+++....+-+. ....+++++ .+.+...+|.|++
T Consensus 231 ~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~ 310 (463)
T KOG2816|consen 231 QSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRL 310 (463)
T ss_pred hhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Confidence 444444555555543 34444444444333311122 1223666665544322 233456655 5588889999998
Q ss_pred hhhhhHHHHHHHHH-hhhcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhh
Q 013318 92 LILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ 170 (445)
Q Consensus 92 l~~g~~~~~~~~~~-~~~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~ 170 (445)
..+|++.-.+-.+. .++++.+.++...++.+ ..+...++..++++.+. +++|+|++.++....-.++.
T Consensus 311 i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v----------~~~e~g~v~~~is~i~~l~~ 379 (463)
T KOG2816|consen 311 ISLGLLSEFLQLLLFAFATETWMMFAAGVVVA-LAGIVFPAIRAFASILV----------SPEEQGKVFGIISGIEGLSG 379 (463)
T ss_pred hhHHHHHHHHHHHHHHHhccchhhhHHHHHHH-hhcchhHHHHhHHHhhc----------ccccccchhhHHHHHHHHhh
Confidence 88888765543333 24555555554544444 44556667777777776 57899999999999999998
Q ss_pred hhhhHHHH
Q 013318 171 FVGNLITL 178 (445)
Q Consensus 171 ~iG~li~~ 178 (445)
.+++.+-.
T Consensus 380 ~~~~~~~~ 387 (463)
T KOG2816|consen 380 VVSPALYG 387 (463)
T ss_pred hhhHHHHH
Confidence 88886543
No 272
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.34 E-value=1.3 Score=40.96 Aligned_cols=110 Identities=24% Similarity=0.202 Sum_probs=68.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhh
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 370 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 370 (445)
..+.......+...++.++.|++.||.|||+ .+..+......+.+ ...+.++.. .....+.....|++.+...+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~ 113 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRK-VLIIGLLLFLLGTL--LLALAPNVG---LALLLILRLLQGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchH-HHHHHHHHHHHHHH--HHHhCccch---HHHHHHHHHHHHhhhHHHHH
Confidence 4677778888888888899999999998875 34444433222211 112222211 23444555557888888888
Q ss_pred hhhHHHHhhccC--CchhhHHHHHH-HHHHHHHHHHHhh
Q 013318 371 QLSALLGILFKH--DTEGAFAQLKV-WQCASIAVVFFIG 406 (445)
Q Consensus 371 ~~~~~l~~~~~~--~~~~a~~~~~~-~~~~g~~ig~~i~ 406 (445)
...+++.+.+|+ +++...+.... ....|..++..+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLA 152 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999986 34445555544 3445555554333
No 273
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.98 E-value=0.37 Score=47.67 Aligned_cols=108 Identities=13% Similarity=0.033 Sum_probs=73.0
Q ss_pred hhhhhhhHHHHHHHHHh---hh-cc------hhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhh
Q 013318 90 NALILGTTGYWLFVAAN---LF-PS------WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFN 159 (445)
Q Consensus 90 ~~l~~g~~~~~~~~~~~---~~-~~------~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~ 159 (445)
|++++|.+++.+..... .. +. ...++++=.+.++|.|..=+....++++-.+++ .+++|.+++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~-------~~~~~~~~F 74 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDED-------DDSRRDSFF 74 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT-------TTTHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhccc-------chhhhhhhH
Confidence 45667777666544431 11 22 256677778899999999988888888887542 256788899
Q ss_pred hHHHHHHHHhhhhhhHHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH
Q 013318 160 GEFWGMFASHQFVGNLITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM 216 (445)
Q Consensus 160 g~~~~~~~lg~~iG~li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~ 216 (445)
.+++...++|..++..+...+.++ ++|. ..|.+..+.++++.+..
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~-----------~~~~-~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQN-----------YGWF-LGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHC-----------S-HH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHhhcccchhhccc-----------cchh-hhhhHHHHHHHHHHHHH
Confidence 999999999999998877776533 3453 34555555555555544
No 274
>PRK03612 spermidine synthase; Provisional
Probab=93.82 E-value=1.9 Score=44.71 Aligned_cols=26 Identities=8% Similarity=-0.031 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccC
Q 013318 291 GVGGAMAVYGAFDAICSLAAGRLTTG 316 (445)
Q Consensus 291 ~~g~~~~~~~i~~~~g~~~~G~l~d~ 316 (445)
..+.+.+++-.+..+|+.+.+++.++
T Consensus 51 ~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 51 QFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 34556666777777787777776543
No 275
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=93.69 E-value=0.84 Score=42.25 Aligned_cols=81 Identities=11% Similarity=-0.046 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCCccchHhH----HHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhh
Q 013318 294 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG----GAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 369 (445)
Q Consensus 294 ~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 369 (445)
....++-.+..+|-+..|..++..-+||+.+.. |.++..+..+. .....++.. .+....++..++.|++.-..|
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~-~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNA-AGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchH-HHHHHHHHHHHHHHHHHHhhh
Confidence 334455555556667778777654444444332 22222222111 112233321 112345666667777766666
Q ss_pred hhhhHHH
Q 013318 370 TQLSALL 376 (445)
Q Consensus 370 ~~~~~~l 376 (445)
+++..+.
T Consensus 223 ~ViL~lP 229 (267)
T PF07672_consen 223 GVILNLP 229 (267)
T ss_pred HHHhcCh
Confidence 6544443
No 276
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.26 E-value=0.72 Score=46.73 Aligned_cols=121 Identities=13% Similarity=0.067 Sum_probs=68.0
Q ss_pred HHHhhhhccccCCC----CccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhc
Q 013318 305 ICSLAAGRLTTGLP----SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILF 380 (445)
Q Consensus 305 ~g~~~~G~l~d~~g----~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~ 380 (445)
...++.|.++|.+. ||+..++++.++..+.... +...+..... .....+..++..+|.+......-++..|..
T Consensus 39 ~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~-~~~~~~~~~s--~~~~~~~l~la~~g~a~~DV~aDa~vvE~~ 115 (433)
T PF03092_consen 39 SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALV-LALLPASESS--AAIAVVLLFLASFGYAFADVAADALVVELA 115 (433)
T ss_pred HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHH-HHhcccccch--hhhHHHHHHHHHHHHHHHHHhhhHHHHHHh
Confidence 44677899999874 6666777777766544321 2222221111 123334445556666666666677888877
Q ss_pred cCCchh---hHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHHHHHHH
Q 013318 381 KHDTEG---AFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVG 428 (445)
Q Consensus 381 ~~~~~~---a~~~~~~~~~~g~~ig~~i~~~----~~~~~~~~i~~~~~~~~~~~ 428 (445)
.++... .-+.....+.+|..++..+.+. .+..+.+.+...+..+..+.
T Consensus 116 ~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 116 RREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred hcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHH
Confidence 544322 3456666677777766555533 34555666655554544433
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.03 E-value=11 Score=38.11 Aligned_cols=110 Identities=17% Similarity=0.169 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHH-HHhhccCCCC---cc-chhHHHHHHHHHhhhhhh
Q 013318 293 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW-ILINYSVTSG---VL-GTLYPLIMAALLGIGDGV 367 (445)
Q Consensus 293 g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~-~~~~~~~~~~---~~-~~~~~~~~~~l~G~~~~~ 367 (445)
-.....+.++-.+|+.+..+..- -++|.+.+.+..++-.+.+-+ .+....+... .. .-...++..+++|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 34566899999999987665321 111211222333332221111 1112221100 00 013455678888998877
Q ss_pred hhhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHH
Q 013318 368 LNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF 403 (445)
Q Consensus 368 ~~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~ 403 (445)
..+.......+..+++ ++.+-.+..+...+|..+|-
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs 425 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGA 425 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666555555555433 33343455555555555443
No 278
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.06 E-value=0.56 Score=49.90 Aligned_cols=172 Identities=14% Similarity=0.101 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHhhhcccccccccc--cchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHh
Q 013318 263 LFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI 340 (445)
Q Consensus 263 ~~~~~g~~~~f~~~~~~~~~~~~~~~--~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~ 340 (445)
..+..+...+++.+..+. .++-++ .++.|++...+-+++.+...+..+..-|..|-+ ++-.|.++.+++-++.
T Consensus 105 ~~~~q~l~~~y~~s~Itt--iErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr-~Ig~G~~~m~lgsll~-- 179 (735)
T KOG3626|consen 105 AAFAQGLYVGYFNSVITT--IERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPR-WIGIGLVLMGLGSLLF-- 179 (735)
T ss_pred HHHHHHhhhhhhhhhhhh--hhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccc-eeeechhHHHHHHHHH--
Confidence 344445444444333332 233333 346777777788888888877777777765444 5566666554432211
Q ss_pred hccC------------------CC---------------------Cc--------cchhHHHHHHHHHhhhhhhhhhhhh
Q 013318 341 NYSV------------------TS---------------------GV--------LGTLYPLIMAALLGIGDGVLNTQLS 373 (445)
Q Consensus 341 ~~~~------------------~~---------------------~~--------~~~~~~~~~~~l~G~~~~~~~~~~~ 373 (445)
..++ .+ +. ..+.++++.-++.|+|..-.+|.-.
T Consensus 180 alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGi 259 (735)
T KOG3626|consen 180 ALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGI 259 (735)
T ss_pred hChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCC
Confidence 1110 00 00 0112445677788999888888777
Q ss_pred HHHHhhccCCchh-hHHHHHHHHHHHHHHHHHhhcc----------------------hh-HHHHHHHHHHHHHHHHHHH
Q 013318 374 ALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGPY----------------------IS-LQAMLIVMVVGICVALVGI 429 (445)
Q Consensus 374 ~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig~~i~~~----------------------~~-~~~~~~i~~~~~~~~~~~~ 429 (445)
+++=|...++..+ ..|+......+|.++|++++.. .+ ++..|.+++.+.+++.+.+
T Consensus 260 sYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~ 339 (735)
T KOG3626|consen 260 SYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL 339 (735)
T ss_pred ccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 8887766554444 4689989999999999877521 22 3446888888888888888
Q ss_pred HHHHHHHHhh
Q 013318 430 LFLTIQVEKA 439 (445)
Q Consensus 430 ~~~~~~~~~~ 439 (445)
++.-++++++
T Consensus 340 f~fPk~lp~~ 349 (735)
T KOG3626|consen 340 FFFPKELPKS 349 (735)
T ss_pred HhCcccCccc
Confidence 8876666543
No 279
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.63 E-value=15 Score=36.45 Aligned_cols=107 Identities=19% Similarity=0.240 Sum_probs=53.5
Q ss_pred HHHHHH-HHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHH-HHHHhhccCCCCccc-hhHHHHHHHHHhhhhhhhh
Q 013318 293 GGAMAV-YGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF-LWILINYSVTSGVLG-TLYPLIMAALLGIGDGVLN 369 (445)
Q Consensus 293 g~~~~~-~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~~~~~~ 369 (445)
-..... +.+...+|+....++.++ ++|+.. +..++-.+.+ +..+..+.|.+...+ -....+...++|+..|=..
T Consensus 285 ~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~--i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 285 LLLVFLSFNVFDLIGSILAALLTWP-DPRKLT--IPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred HHHHHHHhHHHHHhhhhhhhcccCC-CCceeh--HHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 334445 899999998888887665 344432 2222222211 001122222111100 1345566777888777666
Q ss_pred hhhhHHHHhhccCCchhhHH-HHHHHHHHHHHHH
Q 013318 370 TQLSALLGILFKHDTEGAFA-QLKVWQCASIAVV 402 (445)
Q Consensus 370 ~~~~~~l~~~~~~~~~~a~~-~~~~~~~~g~~ig 402 (445)
+....+..+.+|++...+-| +..++...|...|
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G 395 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALG 395 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 66556666666544333333 4444444454444
No 280
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=91.00 E-value=3.8 Score=41.51 Aligned_cols=59 Identities=7% Similarity=-0.000 Sum_probs=38.3
Q ss_pred hhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHHh
Q 013318 112 YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (445)
Q Consensus 112 ~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~l 180 (445)
...++.-++.|+..|-..+....+..+.. +++||..+-.+...+..+|..+|..++..+
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v----------~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQV----------DPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444578889998877766655554443 356776666665666677778887776544
No 281
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.96 E-value=6.3 Score=39.99 Aligned_cols=79 Identities=16% Similarity=0.121 Sum_probs=54.6
Q ss_pred HHHhCcchhhhhhhHHHHHHHHHh-h-----h-------------cchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhh
Q 013318 83 VRVLGSKNALILGTTGYWLFVAAN-L-----F-------------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (445)
Q Consensus 83 ~dr~G~k~~l~~g~~~~~~~~~~~-~-----~-------------~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~ 143 (445)
++++|+++++.++..+..++.+.. . + |+.....+..+++|++.+..-+....++....
T Consensus 306 ir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~--- 382 (461)
T KOG3098|consen 306 IRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY--- 382 (461)
T ss_pred hhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh---
Confidence 467999999999988776655442 1 1 13545667789999999998888888888886
Q ss_pred hhccCCCccchhhhhhhHHHHHHHHhhhh
Q 013318 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFV 172 (445)
Q Consensus 144 ~~~~~~~~~~~rg~~~g~~~~~~~lg~~i 172 (445)
|++|.++++++-.-...+..+
T Consensus 383 --------~~~~~~~fsi~kfyq~~~s~v 403 (461)
T KOG3098|consen 383 --------PDDRAQAFSLFKFYQSVASCV 403 (461)
T ss_pred --------cCchHHHHHHHHHHHHHHHHH
Confidence 456777666654433444333
No 282
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=90.27 E-value=0.079 Score=55.13 Aligned_cols=119 Identities=16% Similarity=0.054 Sum_probs=2.8
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHH-HHhhcc--C------C------------
Q 013318 287 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW-ILINYS--V------T------------ 345 (445)
Q Consensus 287 ~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~-~~~~~~--~------~------------ 345 (445)
+..+++|.+.+.+-++.++..++..++.+|-. |.+++-.|.++.+++.++ .+-.+. + +
T Consensus 35 l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~h-rprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~ 113 (539)
T PF03137_consen 35 LSSSQSGLISSSYDIGSLVVVLFVSYFGGRGH-RPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNL 113 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccccc
Confidence 44457899999999999999999988888754 444566666655544321 110000 0 0
Q ss_pred C--------------------C-c-cchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchh-hHHHHHHHHHHHHHHH
Q 013318 346 S--------------------G-V-LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVV 402 (445)
Q Consensus 346 ~--------------------~-~-~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~-a~~~~~~~~~~g~~ig 402 (445)
. . . ....++++.-++.|+|.+...+.-.+++=|..+++..+ ..|++.....+|.++|
T Consensus 114 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~G 193 (539)
T PF03137_consen 114 CDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALG 193 (539)
T ss_dssp --------------------------------------SSS---------------------------------------
T ss_pred ccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHH
Confidence 0 0 0 00123456778889999888888889998888776655 4588888888898888
Q ss_pred HHhh
Q 013318 403 FFIG 406 (445)
Q Consensus 403 ~~i~ 406 (445)
++++
T Consensus 194 f~lg 197 (539)
T PF03137_consen 194 FLLG 197 (539)
T ss_dssp ----
T ss_pred HHHH
Confidence 7765
No 283
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=88.27 E-value=1.5 Score=33.26 Aligned_cols=61 Identities=15% Similarity=0.031 Sum_probs=43.9
Q ss_pred HHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHH
Q 013318 274 VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF 335 (445)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~ 335 (445)
+.+.+|....+.+++.++.|++.+...++..+|.+...++.++..+++ ++..+++...+..
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~-~~~~~l~~~~~~~ 71 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR-LLRAGLLLTVLST 71 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH-HHHHHHHHHHHHH
Confidence 334555444455677788999999999999999999999888754443 5566666655543
No 284
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=85.42 E-value=18 Score=36.58 Aligned_cols=140 Identities=15% Similarity=0.137 Sum_probs=77.4
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhhhhhccCCCCchHHHHHHHHHHH----HhhhhHHHHHHHhCcchhhhhhhHHHHHHH
Q 013318 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFT----CFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (445)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~a----i~~l~~g~l~dr~G~k~~l~~g~~~~~~~~ 103 (445)
..++..+++..+.|..-.+..+++.....+.+.+....+++-+..+ .+.+..|++.+|+|..|.=+++.....+..
T Consensus 258 q~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 258 QPVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCL 337 (432)
T ss_pred CHHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Confidence 3445666666555554333334444444445777766666555443 356789999999999999888876543222
Q ss_pred ----HHhhhcch--hhHHhHHHHhhhhhH--Hhhhh---hhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhh
Q 013318 104 ----AANLFPSW--YTMVPASLYLGFAAS--IIWVG---EGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFV 172 (445)
Q Consensus 104 ----~~~~~~~~--~~li~~r~l~Gig~g--~~~~~---~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~i 172 (445)
...+.+.- ...-..-++.|+..+ ++|.- ...++-|. .|++|||...|...+..++--.+
T Consensus 338 ~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~----------V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 338 ALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQEN----------VPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhccc----------CCHHHhhHHHHHHHHHHHHHHHH
Confidence 22333221 111112233344332 23332 22222222 36889999999888777666555
Q ss_pred hhHHH
Q 013318 173 GNLIT 177 (445)
Q Consensus 173 G~li~ 177 (445)
-..+.
T Consensus 408 ~~~~~ 412 (432)
T PF06963_consen 408 SFVLT 412 (432)
T ss_pred HHHHH
Confidence 54443
No 285
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=83.13 E-value=23 Score=37.29 Aligned_cols=151 Identities=15% Similarity=0.081 Sum_probs=79.1
Q ss_pred HhhhhhhccCCCCchH----HHHHHHHHHHHhhhhHHHHHHH-hCcchhhhhhhHHHHHHHHHh----hh----c-----
Q 013318 48 QNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRV-LGSKNALILGTTGYWLFVAAN----LF----P----- 109 (445)
Q Consensus 48 ~~~~~~i~~~~~~g~~----~~~~~~~~~ai~~l~~g~l~dr-~G~k~~l~~g~~~~~~~~~~~----~~----~----- 109 (445)
.++...+..+.+.... ....+.+......+..+.++|. +||=+++.++.+++.+...+. .. |
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 3555555444444332 1333444444566788899995 788899999988765543221 11 1
Q ss_pred -------------chhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhh--hhhhHHHHHHHHhhhhhh
Q 013318 110 -------------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIG--SFNGEFWGMFASHQFVGN 174 (445)
Q Consensus 110 -------------~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg--~~~g~~~~~~~lg~~iG~ 174 (445)
....++.+--+..+|.|+.=+...++-++-.++ ..+++++. ..+.+++...+.|..+..
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~------~~~~~~~~~~~fFnW~yf~~~~g~l~a~ 211 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDE------LDPVEVKGIPSFFNWFYFSQNGGALLAQ 211 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCc------cCcchhhCcccchhHHHHHHHHHHHHHH
Confidence 022455555666677777655544444554431 11233344 556666555565555555
Q ss_pred HHHHHhhcCccccccccCCCCCcchhHHHHHHHHHHHHHHHH
Q 013318 175 LITLAVLKDDKVCAALLGGSTSGTTLLFIVFLGVITLGTILM 216 (445)
Q Consensus 175 li~~~l~~~~~~~~~~~~~~~~w~~~~~~i~~~l~~~~~~l~ 216 (445)
.+..+... ..+|. +-|.+..+++.++++++
T Consensus 212 t~~vyiq~-----------~~~w~-lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 212 TVLVYIQD-----------NVGWK-LGFGIPTVLNALAILIF 241 (571)
T ss_pred HHHHhhhh-----------cccce-eeccHHHHHHHHHHHHH
Confidence 44433321 12442 33555555555555443
No 286
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=82.47 E-value=22 Score=35.16 Aligned_cols=70 Identities=11% Similarity=0.105 Sum_probs=38.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHHHHHHHHhhhhcccc-----CCCCccchHhHHH
Q 013318 256 RMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTT-----GLPSITFIVSGGA 328 (445)
Q Consensus 256 ~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d-----~~g~~~~~i~~g~ 328 (445)
++..+..++..+|+..+... ..|..+..++.+.+..+.....++=.+ -.+++..+.| |+||||..+.-+.
T Consensus 32 ~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~s--LKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 32 SILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPFS--LKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHHH--HHHHHHhhhHHHHHHhhccccceeeehH
Confidence 45666667777888765543 445444445555444444333222221 1234445555 9999986654443
No 287
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=82.41 E-value=7.7 Score=29.38 Aligned_cols=63 Identities=22% Similarity=0.096 Sum_probs=45.1
Q ss_pred HhhhHhhhhhhccCCCCchHH----HHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHh
Q 013318 44 YGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN 106 (445)
Q Consensus 44 ~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~ 106 (445)
+.....+.|.+.+|.+++... .+.-|..|-++++.+.++.++..+++.+..+.+...+.++..
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 334445677777777776544 566777888999999999988787888888877665555543
No 288
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=81.52 E-value=9.6 Score=38.08 Aligned_cols=115 Identities=14% Similarity=0.160 Sum_probs=68.0
Q ss_pred hhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhhhhhhhhhhhHHHHhhccCC-chhh
Q 013318 309 AAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGA 387 (445)
Q Consensus 309 ~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~-~~~a 387 (445)
+...+.|.++.| ++++++.+...++.. ++.|.++ ...+-++-+++|.+.+.- ...++++=...|++ ..++
T Consensus 60 ~vflltd~l~Yk-pviil~~~~~i~t~~--lll~~~s-----v~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~v 130 (412)
T PF01770_consen 60 PVFLLTDYLRYK-PVIILQALSYIITWL--LLLFGTS-----VLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKV 130 (412)
T ss_pred HHHHHHHHhhhh-HHHHHHHHHHHHHHH--HHHHHCc-----HHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHHHHHH
Confidence 345677887665 566777776666543 2345533 244567788888887663 34445544444443 2335
Q ss_pred HHHHHHHHHHHHHHHHHhh------cchhHHHHHHHHHHHHHHHHHHHHHH
Q 013318 388 FAQLKVWQCASIAVVFFIG------PYISLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 388 ~~~~~~~~~~g~~ig~~i~------~~~~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
.|.-+....+|-.++.+++ ...++....++..+...++++..+++
T Consensus 131 ts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 131 TSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 5555555555544444333 24567777788777777777766654
No 289
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=79.20 E-value=82 Score=32.49 Aligned_cols=67 Identities=10% Similarity=0.121 Sum_probs=37.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHH-HHHHHHHhhhhccccCCCCccc
Q 013318 255 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYG-AFDAICSLAAGRLTTGLPSITF 322 (445)
Q Consensus 255 ~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~-i~~~~g~~~~G~l~d~~g~~~~ 322 (445)
|+++.+..++++..+..+..-. .=..+.....|.+.+.++-.-.- -++++...+..++++++++++.
T Consensus 24 ~k~~~l~~m~f~i~f~y~~lR~-~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~l 91 (491)
T PF03219_consen 24 KKFLPLALMFFFILFNYTILRD-LKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 5677777777776665444311 11112112236666665433211 2334555678899999988773
No 290
>PRK03612 spermidine synthase; Provisional
Probab=72.83 E-value=1.2e+02 Score=31.45 Aligned_cols=28 Identities=18% Similarity=0.070 Sum_probs=21.5
Q ss_pred hhhhhhhHHHHHHHHhhhhhhHHHHHhh
Q 013318 154 VIGSFNGEFWGMFASHQFVGNLITLAVL 181 (445)
Q Consensus 154 ~rg~~~g~~~~~~~lg~~iG~li~~~l~ 181 (445)
+-|+..|-.++...+|.++|.++...+.
T Consensus 142 ~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 142 HLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred chhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 3567778788888999999998765544
No 291
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=72.53 E-value=62 Score=31.20 Aligned_cols=55 Identities=7% Similarity=0.004 Sum_probs=32.1
Q ss_pred hHHHHHHHHHhhh-hhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHHHHHhh
Q 013318 352 LYPLIMAALLGIG-DGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIG 406 (445)
Q Consensus 352 ~~~~~~~~l~G~~-~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~ig~~i~ 406 (445)
.+.++..+.=|+- .+.+..+-..+-.+.-||+|+-++|......+.|..++.+++
T Consensus 343 ~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 343 WIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 3444444555663 444444555666556666677677776666677766655444
No 292
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=63.78 E-value=74 Score=29.86 Aligned_cols=85 Identities=14% Similarity=0.311 Sum_probs=53.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchh-h--HHHHHHHHHHHHHHHHH-hh---c--------------chhH
Q 013318 353 YPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG-A--FAQLKVWQCASIAVVFF-IG---P--------------YISL 411 (445)
Q Consensus 353 ~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~-a--~~~~~~~~~~g~~ig~~-i~---~--------------~~~~ 411 (445)
-++....+.|+..+....+...+.+.+..++.++ + +|-..++.-+...+++- +. | +...
T Consensus 295 ymyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~GiA~~lie~~~~a~~~~k~~~~~r~V~v~V 374 (412)
T KOG4830|consen 295 YMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNGIAYQLIELWTPAYDALKSAIFYRRVMVFV 374 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcccHHHHHHHhcCCcchhhhhhhhheEEEEEe
Confidence 4677788899999998888788888888777543 4 57666776665555432 21 1 0122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 412 QAMLIVMVVGICVALVGILFLTIQVE 437 (445)
Q Consensus 412 ~~~~~i~~~~~~~~~~~~~~~~~~~~ 437 (445)
.....+.+.+.+++...+.+.|+|..
T Consensus 375 ~G~~LV~A~~~~l~lA~~~~~E~~~A 400 (412)
T KOG4830|consen 375 PGTCLVLAFLVLLSLAPFKIGERRRA 400 (412)
T ss_pred cchhHHHHHHHHHhhhhHhhhhhhhc
Confidence 22334445555666666666776653
No 293
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=62.73 E-value=1.9e+02 Score=29.74 Aligned_cols=175 Identities=13% Similarity=0.064 Sum_probs=85.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhcccccccccccchhHHHHHHHHH-HHHHHHhhhhccccCCCCccchHhHHHHHHHH
Q 013318 255 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIVSGGAIAQVV 333 (445)
Q Consensus 255 ~~~~~l~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~i-~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~ 333 (445)
|+++.+..++++.++..++.-. .-..+.....+.+.+.++-...-+ ++++..++..++.+++.+++..-.+ ......
T Consensus 27 ~kflpl~Ll~f~I~~ny~~lR~-lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~-~~~F~~ 104 (509)
T COG3202 27 KKFLPLALLFFCILFNYNLLRS-LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYII-LGFFLG 104 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHH-HHHHHH
Confidence 5667777777777765554421 111111123455566655443333 5667777889999999877633211 111111
Q ss_pred HHHH-HHhhcc------CC-----------C-Cc---------cchhHHHHHHHHHhhhhhhhhhh-hhHHHHhhccCCc
Q 013318 334 VFLW-ILINYS------VT-----------S-GV---------LGTLYPLIMAALLGIGDGVLNTQ-LSALLGILFKHDT 384 (445)
Q Consensus 334 ~~~~-~~~~~~------~~-----------~-~~---------~~~~~~~~~~~l~G~~~~~~~~~-~~~~l~~~~~~~~ 384 (445)
++++ .+.-++ ++ + .. +.....++++=+||.- ..+. -+....|+...++
T Consensus 105 fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgsl---V~S~lFw~faNeitt~~e 181 (509)
T COG3202 105 FFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSL---VLSLLFWQFANEITTIEE 181 (509)
T ss_pred HHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhHHH
Confidence 1111 111121 11 1 00 0112345555555542 2222 2344556665444
Q ss_pred hh-hHHHHHHHHHHHHHHHHHhhcch--------------hHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 385 EG-AFAQLKVWQCASIAVVFFIGPYI--------------SLQAMLIVMVVGICVALVGILFLTI 434 (445)
Q Consensus 385 ~~-a~~~~~~~~~~g~~ig~~i~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~ 434 (445)
++ -++.++.+.+++..++..+..++ .....+.+.....++++.++.+++|
T Consensus 182 akRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r 246 (509)
T COG3202 182 AKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINR 246 (509)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43 57888888877765543333211 1333445555555666777777665
No 294
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=60.55 E-value=3.2 Score=39.88 Aligned_cols=108 Identities=14% Similarity=0.090 Sum_probs=2.7
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHH-HHhhccCC----CCccc-hhHHHHHHHHHhhhhhhh
Q 013318 295 AMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW-ILINYSVT----SGVLG-TLYPLIMAALLGIGDGVL 368 (445)
Q Consensus 295 ~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~-~~~~~~~~----~~~~~-~~~~~~~~~l~G~~~~~~ 368 (445)
.+..+.++..+|+.+.++..-+..+++.+ ....++-.+.+-+ ++....|. +.... -+..++..+++|+..|-.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l-~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWL-WILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccH-HHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35578999999999887642111122222 2222222111100 11112211 00000 023456677889988777
Q ss_pred hhhhhHHHHhhccCC-chhhHHHHHHHHHHHHHHHH
Q 013318 369 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF 403 (445)
Q Consensus 369 ~~~~~~~l~~~~~~~-~~~a~~~~~~~~~~g~~ig~ 403 (445)
.+.......+..+++ ++.+-.+..+....|..+|-
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs 301 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGS 301 (309)
T ss_dssp -HHHH-------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776666666666543 44443344454455555443
No 295
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=59.38 E-value=1.1e+02 Score=30.63 Aligned_cols=75 Identities=21% Similarity=0.226 Sum_probs=43.0
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhHHHHhhccCCchhhHHHHHHHHHHHHHH-------H-HHhh-cchhHHHHHHHHHHHH
Q 013318 352 LYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAV-------V-FFIG-PYISLQAMLIVMVVGI 422 (445)
Q Consensus 352 ~~~~~~~~l~G~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~g~~i-------g-~~i~-~~~~~~~~~~i~~~~~ 422 (445)
.+.+++.++.+++++..+..++...+.+ |++.-++. -.+|+++... . .... ...+-...|.+..+..
T Consensus 118 ~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ytqav---m~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~ 193 (406)
T KOG1479|consen 118 LVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYTQAV---MSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVIL 193 (406)
T ss_pred HHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHHHHH---HhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHHH
Confidence 4566788889999999999888888764 55543331 1122222111 1 1111 1123444556666677
Q ss_pred HHHHHHHH
Q 013318 423 CVALVGIL 430 (445)
Q Consensus 423 ~~~~~~~~ 430 (445)
++++++|.
T Consensus 194 llC~i~y~ 201 (406)
T KOG1479|consen 194 LLCFVLYL 201 (406)
T ss_pred HHHHHHHH
Confidence 77777776
No 296
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=50.96 E-value=42 Score=28.46 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=31.2
Q ss_pred hcchhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHh
Q 013318 108 FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASH 169 (445)
Q Consensus 108 ~~~~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg 169 (445)
.|++..++..-++.|+|.-++-- +.+-+. ++|++.|..+|+-.+-.+.+
T Consensus 94 vP~~~~~~~S~~~Fg~gllGisY--GilSaS-----------WD~~r~GSllG~~e~~~N~~ 142 (153)
T PF11947_consen 94 VPPWAVLLVSLVFFGLGLLGISY--GILSAS-----------WDPEREGSLLGWEEFKRNWG 142 (153)
T ss_pred cCchHHHHHHHHHHHHHHHhhhh--hhcccc-----------cCCCCCCCcccHHHHHHhHH
Confidence 37788888888888877643221 222233 36778999988876555543
No 297
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=50.05 E-value=59 Score=30.72 Aligned_cols=87 Identities=13% Similarity=0.027 Sum_probs=47.9
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHHHhhccCCCCccchhHHHHHHHHHhhh
Q 013318 285 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 364 (445)
Q Consensus 285 ~~~~~~~~g~~~~~~~i~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 364 (445)
.+++..++|..++..--.+++...+.|-+.||.|||+.-+..+.. ..++.+ -.++++ +-++++.-++=|+.
T Consensus 67 YgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycit-YiLsCi-----TKhSpq---YkVLmVGR~LGGia 137 (454)
T KOG4332|consen 67 YGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCIT-YILSCI-----TKHSPQ---YKVLMVGRVLGGIA 137 (454)
T ss_pred cCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHH-HHHHHH-----hhcCCc---eEEEeehhhhhhHH
Confidence 455556676655544445567777788999999998743333322 222211 123332 33455555566666
Q ss_pred hhhhhhh-hhHHHHhhc
Q 013318 365 DGVLNTQ-LSALLGILF 380 (445)
Q Consensus 365 ~~~~~~~-~~~~l~~~~ 380 (445)
.+...+. -.++++|.-
T Consensus 138 TsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 138 TSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 6655543 335566654
No 298
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=41.47 E-value=46 Score=31.13 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=23.2
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 400 AVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQV 436 (445)
Q Consensus 400 ~ig~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 436 (445)
+.+...+.+.++...-.++.++.++.+++|.|+.+|.
T Consensus 250 AAtaA~aaF~Pcgiaalvllil~vvliiLYiWlyrrR 286 (295)
T TIGR01478 250 AASAATSTFLPYGIAALVLIILTVVLIILYIWLYRRR 286 (295)
T ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3333333344566666777777777788888887664
No 299
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=41.17 E-value=4.3e+02 Score=27.46 Aligned_cols=25 Identities=20% Similarity=0.317 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCC
Q 013318 295 AMAVYGAFDAICSLAAGRLTTGLPS 319 (445)
Q Consensus 295 ~~~~~~i~~~~g~~~~G~l~d~~g~ 319 (445)
....+.+++.+++...+++...++.
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 3456777777777777777766654
No 300
>PTZ00370 STEVOR; Provisional
Probab=40.80 E-value=47 Score=31.14 Aligned_cols=37 Identities=11% Similarity=0.130 Sum_probs=23.7
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013318 400 AVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQV 436 (445)
Q Consensus 400 ~ig~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 436 (445)
+.+...+.+.++...-.++.++.++.+++|.|+.+|.
T Consensus 246 AAtaAsaaF~Pygiaalvllil~vvliilYiwlyrrR 282 (296)
T PTZ00370 246 AASAASSAFYPYGIAALVLLILAVVLIILYIWLYRRR 282 (296)
T ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3333333344566666777777777888888887664
No 301
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.79 E-value=79 Score=24.21 Aligned_cols=50 Identities=14% Similarity=0.038 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013318 389 AQLKVWQCASIAVVFFIGPY-ISLQAMLIVMVVGICVALVGILFLTIQVEK 438 (445)
Q Consensus 389 ~~~~~~~~~g~~ig~~i~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 438 (445)
=.++++..+++.+|++++-. -.+.+..++..+.+++.+++.+-....++|
T Consensus 26 r~~q~ilti~aiVg~i~Gf~~Qqls~tvy~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 26 RFQQLILTIGAIVGFIYGFAQQQLSVTVYIVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhc
Confidence 36777777888888776632 366777777777777777766544444433
No 302
>PF11118 DUF2627: Protein of unknown function (DUF2627); InterPro: IPR020138 This entry represents uncharacterised membrane proteins with no known function.
Probab=34.22 E-value=67 Score=23.62 Aligned_cols=19 Identities=16% Similarity=0.198 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHhhhcCCCC
Q 013318 427 VGILFLTIQVEKAFYSPRS 445 (445)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~ 445 (445)
+.-+...+..||+++++||
T Consensus 57 i~GfI~~RDRKrnkV~pRF 75 (77)
T PF11118_consen 57 IAGFILHRDRKRNKVQPRF 75 (77)
T ss_pred HHhHhheeeccccccchhh
Confidence 3334456677788888885
No 303
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=32.71 E-value=16 Score=35.14 Aligned_cols=56 Identities=11% Similarity=0.133 Sum_probs=2.6
Q ss_pred HHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhHHHHH
Q 013318 114 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (445)
Q Consensus 114 li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg~~iG~li~~~ 179 (445)
.++.-++.|+..|-+-+....+..+.. ++++|..+-.+...+...|..+|..++..
T Consensus 251 ~~i~~~l~g~TNGyl~tl~m~~~p~~v----------~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 251 FIILMLLFGFTNGYLSTLAMMYAPKSV----------SPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp ----------------HHHH----------------------------------------------
T ss_pred HHHHHHHHHHccchhhhceeeeCCCcC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344557889988877666666655554 34555554444344456677777766543
No 304
>COG4769 Predicted membrane protein [Function unknown]
Probab=30.06 E-value=2.1e+02 Score=24.67 Aligned_cols=46 Identities=17% Similarity=0.143 Sum_probs=32.6
Q ss_pred HHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhhhcchhhHHhHHHHhhh
Q 013318 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGF 123 (445)
Q Consensus 73 ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~~~~~~~li~~r~l~Gi 123 (445)
++.+...-++..++|+|..-.+|. .+.+.+.+|..+++++|++.|-
T Consensus 87 ~i~S~L~m~~l~~f~~k~~S~lgi-----S~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 87 AILSTLFMYFLYQFGPKYLSLLGI-----SVMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHcCCceEeeeeh-----hhHHHHHHhHHHHHHHHHHHhc
Confidence 344445557889999998755553 3345567899999999988773
No 305
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=28.61 E-value=6.9e+02 Score=26.01 Aligned_cols=48 Identities=6% Similarity=0.142 Sum_probs=36.5
Q ss_pred hhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHHHHHHh
Q 013318 112 YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASH 169 (445)
Q Consensus 112 ~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~~~~lg 169 (445)
..+++.-++.-+..-..++++.++-++.+ +|.-=|.+|.+.+...++|
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharIS----------DP~IGGTYMTLLNTvSNLG 453 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARIS----------DPAIGGTYMTLLNTVSNLG 453 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc----------CcccchHHHHHHHHHHhcC
Confidence 34556677888888888888888888887 4677788888877766655
No 306
>CHL00031 psbT photosystem II protein T
Probab=26.86 E-value=1.4e+02 Score=18.08 Aligned_cols=20 Identities=35% Similarity=0.489 Sum_probs=11.4
Q ss_pred HHHHHHHH-HHhccCCcccCc
Q 013318 208 VITLGTIL-MCFLRKEEDKGE 227 (445)
Q Consensus 208 l~~~~~~l-~~~l~~~~~~~~ 227 (445)
.+.++++. .+++|||++.++
T Consensus 11 ~~tlgilFFAI~FRePPri~k 31 (33)
T CHL00031 11 VSTLGIIFFAIFFREPPKVPT 31 (33)
T ss_pred HHHHHHHHHhheecCCCCCCC
Confidence 34445443 367888876543
No 307
>COG4721 ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]
Probab=26.56 E-value=1.1e+02 Score=26.19 Aligned_cols=97 Identities=21% Similarity=0.245 Sum_probs=46.2
Q ss_pred cchhHHHHHH---HHHHHHHHhhhHhhhhhhc----cCCCCchHHHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHH
Q 013318 27 TRDVHILSCA---FLLIFLAYGAAQNLETTVN----TEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (445)
Q Consensus 27 ~~~~~~l~~~---~~~~~~~~~~~~~~~~~i~----~~~~~g~~~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~ 99 (445)
.+.++++++. |-.+|..+....+++.... -|...+.+ .++....+.++++.++.|-|.-. ++-..-
T Consensus 7 lkdIvi~svlsi~fgvvfl~w~~~~~v~at~lhp~ale~~~~~i----~~GiW~maavi~~l~IpkpGaAl---~~Ev~A 79 (192)
T COG4721 7 LKDIVILSVLSIVFGVVFLGWGYVGNVLATLLHPLALEPFANEI----LFGIWFMAAVIAALFIPKPGAAL---IGEVLA 79 (192)
T ss_pred hHHHHHHHHHHHHHHhheeehhhhhHHHHHhcchhhcCccccch----HHHHHHHHHHHeeeeecCCcHHH---HHHHHH
Confidence 3445544443 4444444333334444332 23433333 44444456666666666666422 222222
Q ss_pred HHHHHHhhhcchhhHHhHHHHhhhhhHHhhh
Q 013318 100 WLFVAANLFPSWYTMVPASLYLGFAASIIWV 130 (445)
Q Consensus 100 ~~~~~~~~~~~~~~li~~r~l~Gig~g~~~~ 130 (445)
++.......+.=..-+...+.||+|.-..+.
T Consensus 80 a~ve~ll~sqfgi~tivsgfvQGlgaE~vFa 110 (192)
T COG4721 80 ALVEVLLGSQFGIGTIVSGFVQGLGAEFVFA 110 (192)
T ss_pred HHHHHHHcCCCCchHHHHHHHHhhhhhHHHH
Confidence 2222222233333344578999999876553
No 308
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=26.31 E-value=1.5e+02 Score=31.18 Aligned_cols=133 Identities=14% Similarity=0.043 Sum_probs=76.8
Q ss_pred HHHHHHhhhhccccCCCCccchHhHHHHHHHHHHHHH-Hh----hccC-------CC------CccchhHHHHHHHHHhh
Q 013318 302 FDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LI----NYSV-------TS------GVLGTLYPLIMAALLGI 363 (445)
Q Consensus 302 ~~~~g~~~~G~l~d~~g~~~~~i~~g~~~~~~~~~~~-~~----~~~~-------~~------~~~~~~~~~~~~~l~G~ 363 (445)
.+-...++++.++|.+--|...+.++.++...+..++ +. ...+ .. ......+++...-+..+
T Consensus 85 ~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~ 164 (571)
T KOG1237|consen 85 TQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIAL 164 (571)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHhee
Confidence 3345556778888887545445556655554442211 10 1111 10 00112345666677788
Q ss_pred hhhhhhhhhhHHHHhhccCC--ch--h---hHHHHHHHHHHHHHHHHHhhc----chhHHHHHHHHHHHHHHHHHHHHHH
Q 013318 364 GDGVLNTQLSALLGILFKHD--TE--G---AFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGILFL 432 (445)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~~--~~--~---a~~~~~~~~~~g~~ig~~i~~----~~~~~~~~~i~~~~~~~~~~~~~~~ 432 (445)
|.+...+...+.=+|-+++. ++ . -+..+.+-++.|..++..+-. ..++.+.+.+..+...++++.++..
T Consensus 165 G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 165 GAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred ccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 99999999999999998732 11 1 256677777778766543332 2456667777777777777766554
Q ss_pred HH
Q 013318 433 TI 434 (445)
Q Consensus 433 ~~ 434 (445)
.+
T Consensus 245 ~~ 246 (571)
T KOG1237|consen 245 FP 246 (571)
T ss_pred ce
Confidence 43
No 309
>PF09819 ABC_cobalt: ABC-type cobalt transport system, permease component; InterPro: IPR017195 This group represents a predicted ABC-type thiamin-related transport system, permease component 1. It is probably part of the ABC transporter complex ykoCDEF that could transport hydroxymethylpyrimidine (HMP) and/or thiamine. It could also transport other HMP-containing products. The complex is composed of two ATP-binding proteins (ykoD), two transmembrane proteins (ykoC and ykoE) and a solute-binding protein (ykoF).
Probab=25.62 E-value=3.8e+02 Score=22.04 Aligned_cols=67 Identities=21% Similarity=0.165 Sum_probs=37.6
Q ss_pred CchHHHHHHHHHHHHhhhhHHHHHHHhCcchhhhhhhHHHHHHHHHhhhcchhhHHhHHHHhhhhhHHhh
Q 013318 60 LGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIW 129 (445)
Q Consensus 60 ~g~~~~~~~~~~~ai~~l~~g~l~dr~G~k~~l~~g~~~~~~~~~~~~~~~~~~li~~r~l~Gig~g~~~ 129 (445)
.+.....+.++.+.+..+++..+++|-|.-- ++..+-++-....-.+.=...++..++||+|.-...
T Consensus 35 ~~p~~~~~~~GlW~~a~~la~~iiRKPGaa~---~~e~laa~ve~~~G~~~G~~~ii~gl~QGlg~El~F 101 (129)
T PF09819_consen 35 LGPLAGGILYGLWFMAGPLAAYIIRKPGAAL---LAELLAALVEMLLGSQWGIMTIISGLVQGLGAELGF 101 (129)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCCCcHHH---HHHHHHHHHHHHhcCcchHHHHHHHHHhHHHHHHHH
Confidence 4444556677777788888888988877522 111111111111112222334567899999886544
No 310
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=24.85 E-value=2.5e+02 Score=21.39 Aligned_cols=45 Identities=20% Similarity=0.385 Sum_probs=28.1
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhhhhhccCCCC-chHHHHHHHH
Q 013318 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNL-GTISLGILYT 70 (445)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~-g~~~~~~~~~ 70 (445)
.++-.+.+.+.++..|.++.......|.+....-. |..+.++.++
T Consensus 14 r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g 59 (91)
T PF04341_consen 14 RRRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLG 59 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHH
Confidence 34555667777788888887777788777654322 4444444443
No 311
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=24.07 E-value=4.3e+02 Score=24.77 Aligned_cols=46 Identities=22% Similarity=0.367 Sum_probs=28.4
Q ss_pred hhhHHhHHHHhhhhhHHhhhhhhhHHHHhhhhhhhccCCCccchhhhhhhHHHH
Q 013318 111 WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWG 164 (445)
Q Consensus 111 ~~~li~~r~l~Gig~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~g~~~~ 164 (445)
...+++..++.|+. .|..|+.++.-- + |-.+. .|++.|..+|+.|.
T Consensus 204 ~~~f~I~~Fl~G~f---~WgiQ~ViL~lP-h---EyK~~-~pk~ig~~Fg~iWG 249 (267)
T PF07672_consen 204 FAFFYIFGFLAGFF---LWGIQGVILNLP-H---EYKGY-NPKKIGIQFGLIWG 249 (267)
T ss_pred HHHHHHHHHHHHHH---HHhhhHHHhcCh-h---hhcCC-CcceehhHHHHHHH
Confidence 45566677777754 477777766422 2 22222 46788888888775
No 312
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.03 E-value=2.8e+02 Score=22.07 Aligned_cols=34 Identities=9% Similarity=-0.006 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHhhcchhH-HHHHHHHHHHHHH
Q 013318 391 LKVWQCASIAVVFFIGPYISL-QAMLIVMVVGICV 424 (445)
Q Consensus 391 ~~~~~~~g~~ig~~i~~~~~~-~~~~~i~~~~~~~ 424 (445)
+-....+|..+||+++.+.+. .|.++++..+.+.
T Consensus 52 fIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 334446788899998876643 3444443333333
No 313
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=22.45 E-value=5.7e+02 Score=22.92 Aligned_cols=25 Identities=12% Similarity=0.135 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHH
Q 013318 389 AQLKVWQCASIAVVFFIGPYISLQA 413 (445)
Q Consensus 389 ~~~~~~~~~g~~ig~~i~~~~~~~~ 413 (445)
.......+....+.+...+..+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~ 195 (240)
T PF01925_consen 171 AFFFFFSSVAALISFLILGDVDWPM 195 (240)
T ss_pred HHHHHHHHHHHHHHHHhcCcccHHH
Confidence 3455555666666666655555443
Done!