Query 013319
Match_columns 445
No_of_seqs 465 out of 4013
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 08:21:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 1.6E-40 5.4E-45 363.8 19.0 299 27-410 18-331 (780)
2 3apq_A DNAJ homolog subfamily 100.0 4.8E-37 1.6E-41 283.6 18.0 203 30-315 2-207 (210)
3 3ed3_A Protein disulfide-isome 100.0 5.6E-28 1.9E-32 234.6 19.5 223 197-437 15-281 (298)
4 3us3_A Calsequestrin-1; calciu 100.0 1.1E-27 3.8E-32 239.5 20.0 219 195-438 9-240 (367)
5 1sji_A Calsequestrin 2, calseq 99.9 5.2E-27 1.8E-31 233.1 20.6 219 195-439 7-239 (350)
6 3q6o_A Sulfhydryl oxidase 1; p 99.9 1.2E-26 4E-31 218.8 18.1 205 193-402 6-227 (244)
7 3idv_A Protein disulfide-isome 99.9 9.5E-26 3.2E-30 211.4 18.4 206 195-412 11-235 (241)
8 3f8u_A Protein disulfide-isome 99.9 2.5E-25 8.7E-30 230.1 16.1 214 200-439 2-231 (481)
9 2r2j_A Thioredoxin domain-cont 99.9 1.8E-25 6.3E-30 224.6 14.6 212 198-438 4-231 (382)
10 3t58_A Sulfhydryl oxidase 1; o 99.9 2.9E-24 9.9E-29 222.9 21.9 205 193-402 6-227 (519)
11 2b5e_A Protein disulfide-isome 99.9 1.4E-24 4.6E-29 226.0 14.6 219 195-444 10-239 (504)
12 3apo_A DNAJ homolog subfamily 99.9 2.4E-22 8.2E-27 219.8 20.5 211 199-413 543-766 (780)
13 1a8l_A Protein disulfide oxido 99.8 1.7E-20 5.7E-25 174.1 16.2 198 206-412 9-224 (226)
14 2ywm_A Glutaredoxin-like prote 99.8 2.8E-20 9.4E-25 173.2 17.3 196 207-415 9-221 (229)
15 1bq0_A DNAJ, HSP40; chaperone, 99.8 5E-21 1.7E-25 155.5 5.5 70 29-98 2-72 (103)
16 3h79_A Thioredoxin-like protei 99.8 3.7E-20 1.3E-24 156.2 10.4 110 195-308 11-126 (127)
17 3uem_A Protein disulfide-isome 99.8 1.6E-19 5.4E-24 179.7 16.5 204 199-410 117-353 (361)
18 2ctp_A DNAJ homolog subfamily 99.8 4.1E-20 1.4E-24 142.3 8.5 72 26-97 3-74 (78)
19 2dml_A Protein disulfide-isome 99.8 2.2E-19 7.7E-24 151.6 13.8 115 190-310 8-124 (130)
20 1hdj_A Human HSP40, HDJ-1; mol 99.8 3.6E-20 1.2E-24 142.3 7.9 69 29-97 2-70 (77)
21 2ctr_A DNAJ homolog subfamily 99.8 2.7E-20 9.3E-25 146.6 6.5 72 26-97 3-74 (88)
22 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.2E-19 4E-24 143.0 8.0 71 27-97 14-84 (88)
23 2dn9_A DNAJ homolog subfamily 99.8 1.3E-19 4.5E-24 139.8 8.2 72 26-97 3-75 (79)
24 2dmx_A DNAJ homolog subfamily 99.8 2.5E-19 8.6E-24 142.4 8.3 72 27-98 6-79 (92)
25 2ej7_A HCG3 gene; HCG3 protein 99.8 2.7E-19 9.1E-24 139.2 8.2 71 27-97 6-78 (82)
26 2och_A Hypothetical protein DN 99.8 2.7E-19 9.2E-24 135.8 7.6 68 27-96 5-72 (73)
27 2o37_A Protein SIS1; HSP40, J- 99.8 2.9E-19 1E-23 141.9 5.2 70 27-98 5-74 (92)
28 3gnj_A Thioredoxin domain prot 99.8 1.7E-18 5.8E-23 141.7 9.2 106 198-310 3-110 (111)
29 2dj1_A Protein disulfide-isome 99.8 3.3E-18 1.1E-22 146.3 11.1 111 194-312 12-126 (140)
30 2lgw_A DNAJ homolog subfamily 99.8 7.6E-19 2.6E-23 141.1 6.3 68 30-97 2-71 (99)
31 2ctq_A DNAJ homolog subfamily 99.7 1.1E-18 3.8E-23 143.7 6.4 71 27-97 17-88 (112)
32 2ctw_A DNAJ homolog subfamily 99.7 2.5E-18 8.6E-23 140.8 8.3 72 26-97 13-85 (109)
33 2yua_A Williams-beuren syndrom 99.7 2E-18 7E-23 138.9 7.6 70 26-95 13-83 (99)
34 1x5d_A Protein disulfide-isome 99.7 4.5E-18 1.5E-22 143.9 10.0 106 198-310 6-117 (133)
35 3zzx_A Thioredoxin; oxidoreduc 99.7 4.9E-18 1.7E-22 138.5 9.3 98 202-308 3-104 (105)
36 3hxs_A Thioredoxin, TRXP; elec 99.7 9E-18 3.1E-22 143.8 10.9 110 195-310 18-139 (141)
37 1wjz_A 1700030A21RIK protein; 99.7 2.3E-18 7.7E-23 137.5 6.5 70 27-96 13-89 (94)
38 2trx_A Thioredoxin; electron t 99.7 5.7E-18 2E-22 137.9 8.9 104 199-309 2-107 (108)
39 2voc_A Thioredoxin; electron t 99.7 1.2E-17 3.9E-22 137.5 10.7 102 201-311 3-106 (112)
40 3lz8_A Putative chaperone DNAJ 99.7 2.9E-19 1E-23 174.0 0.0 70 27-96 25-94 (329)
41 2l5l_A Thioredoxin; structural 99.7 1.3E-17 4.4E-22 142.3 10.1 109 197-311 7-127 (136)
42 2i4a_A Thioredoxin; acidophIle 99.7 1.2E-17 4.1E-22 135.5 9.4 104 199-309 2-107 (107)
43 3ga4_A Dolichyl-diphosphooligo 99.7 1.2E-17 4.1E-22 148.2 10.1 117 198-316 17-159 (178)
44 3qfa_C Thioredoxin; protein-pr 99.7 1.6E-17 5.4E-22 137.8 9.7 102 199-309 12-116 (116)
45 1thx_A Thioredoxin, thioredoxi 99.7 1.9E-17 6.5E-22 136.2 10.1 106 198-310 6-113 (115)
46 3hz4_A Thioredoxin; NYSGXRC, P 99.7 1E-17 3.5E-22 143.7 8.6 107 198-311 5-113 (140)
47 1x5e_A Thioredoxin domain cont 99.7 1.3E-17 4.3E-22 140.1 8.7 104 198-311 6-111 (126)
48 3die_A Thioredoxin, TRX; elect 99.7 1.9E-17 6.4E-22 134.1 9.3 101 200-309 4-106 (106)
49 2dj3_A Protein disulfide-isome 99.7 7.7E-18 2.6E-22 142.7 7.3 111 197-311 5-119 (133)
50 2hls_A Protein disulfide oxido 99.7 1.7E-16 5.7E-21 149.2 17.1 192 206-412 14-224 (243)
51 2qsi_A Putative hydrogenase ex 99.7 1.2E-17 4E-22 141.4 8.2 102 201-309 17-122 (137)
52 1t00_A Thioredoxin, TRX; redox 99.7 1.5E-17 5.1E-22 136.4 8.6 104 200-310 6-111 (112)
53 1mek_A Protein disulfide isome 99.7 2.5E-17 8.4E-22 136.3 9.9 112 195-311 3-118 (120)
54 1dby_A Chloroplast thioredoxin 99.7 3.3E-17 1.1E-21 133.1 10.5 102 201-309 3-106 (107)
55 1w4v_A Thioredoxin, mitochondr 99.7 2E-17 6.9E-22 137.7 9.3 105 198-309 12-118 (119)
56 2o8v_B Thioredoxin 1; disulfid 99.7 1.5E-17 5E-22 140.6 8.2 105 198-309 21-127 (128)
57 2djj_A PDI, protein disulfide- 99.7 1.6E-17 5.3E-22 138.3 8.2 105 197-310 5-117 (121)
58 3aps_A DNAJ homolog subfamily 99.7 1E-17 3.6E-22 139.7 7.1 106 199-310 3-113 (122)
59 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 6.5E-18 2.2E-22 138.6 5.4 72 26-97 11-87 (109)
60 2qgv_A Hydrogenase-1 operon pr 99.7 1.6E-17 5.5E-22 141.1 7.7 102 201-310 19-125 (140)
61 2av4_A Thioredoxin-like protei 99.7 1.8E-17 6.2E-22 142.5 8.0 103 201-310 23-139 (160)
62 3uvt_A Thioredoxin domain-cont 99.7 2.9E-17 1E-21 134.1 8.8 102 198-308 4-110 (111)
63 1oaz_A Thioredoxin 1; immune s 99.7 3.4E-17 1.2E-21 137.4 9.2 104 199-309 3-122 (123)
64 2i1u_A Thioredoxin, TRX, MPT46 99.7 2.4E-17 8.1E-22 137.1 8.0 107 198-311 11-119 (121)
65 3tco_A Thioredoxin (TRXA-1); d 99.7 5.1E-17 1.8E-21 132.1 9.8 104 198-309 3-108 (109)
66 2yzu_A Thioredoxin; redox prot 99.7 4.4E-17 1.5E-21 132.3 9.0 103 200-310 2-106 (109)
67 2ppt_A Thioredoxin-2; thiredox 99.7 4.6E-17 1.6E-21 142.3 9.3 105 198-310 46-152 (155)
68 3qou_A Protein YBBN; thioredox 99.7 9.4E-17 3.2E-21 154.4 12.4 108 198-312 6-116 (287)
69 1fb6_A Thioredoxin M; electron 99.7 5.6E-17 1.9E-21 131.1 8.8 102 201-309 2-105 (105)
70 1nsw_A Thioredoxin, TRX; therm 99.7 4.5E-17 1.5E-21 131.8 7.9 101 201-309 2-104 (105)
71 2dj0_A Thioredoxin-related tra 99.7 3.3E-17 1.1E-21 139.9 6.5 101 199-306 7-117 (137)
72 2e0q_A Thioredoxin; electron t 99.7 8.7E-17 3E-21 129.3 8.4 101 201-310 1-103 (104)
73 3p2a_A Thioredoxin 2, putative 99.7 1.4E-16 4.9E-21 137.7 9.9 105 198-310 37-143 (148)
74 2ys8_A RAB-related GTP-binding 99.7 2.4E-17 8E-22 130.2 4.4 62 28-89 25-86 (90)
75 2pu9_C TRX-F, thioredoxin F-ty 99.7 2.3E-16 7.9E-21 129.2 9.5 103 198-309 4-110 (111)
76 3dxb_A Thioredoxin N-terminall 99.7 1.7E-16 5.7E-21 147.1 9.7 107 198-311 11-119 (222)
77 1r26_A Thioredoxin; redox-acti 99.7 2.3E-16 7.9E-21 132.7 9.0 100 201-310 21-123 (125)
78 1xwb_A Thioredoxin; dimerizati 99.7 3.7E-16 1.3E-20 126.4 9.5 101 201-309 2-106 (106)
79 2vlu_A Thioredoxin, thioredoxi 99.6 3.2E-16 1.1E-20 130.5 9.4 103 199-310 13-120 (122)
80 1ep7_A Thioredoxin CH1, H-type 99.6 2.9E-16 1E-20 128.5 8.7 103 200-310 3-111 (112)
81 2c0g_A ERP29 homolog, windbeut 99.6 6.9E-16 2.4E-20 144.6 11.7 104 198-310 15-132 (248)
82 3f3q_A Thioredoxin-1; His TAG, 99.6 6.3E-16 2.2E-20 126.5 10.0 99 201-309 9-109 (109)
83 1v98_A Thioredoxin; oxidoreduc 99.6 3.2E-16 1.1E-20 134.1 8.1 104 199-310 33-138 (140)
84 2l6l_A DNAJ homolog subfamily 99.6 1.3E-16 4.5E-21 139.3 5.7 69 27-95 7-82 (155)
85 4euy_A Uncharacterized protein 99.6 1.3E-16 4.5E-21 129.5 5.2 96 205-309 7-104 (105)
86 1gh2_A Thioredoxin-like protei 99.6 5.5E-16 1.9E-20 126.1 8.7 100 201-309 3-106 (107)
87 2oe3_A Thioredoxin-3; electron 99.6 5.8E-16 2E-20 128.0 8.8 100 199-307 12-113 (114)
88 1syr_A Thioredoxin; SGPP, stru 99.6 8.1E-16 2.8E-20 126.3 9.4 102 198-309 8-111 (112)
89 1xfl_A Thioredoxin H1; AT3G510 99.6 1.3E-15 4.3E-20 127.8 10.3 102 199-309 16-123 (124)
90 3d6i_A Monothiol glutaredoxin- 99.6 8.2E-16 2.8E-20 126.0 8.8 102 201-310 2-109 (112)
91 3gix_A Thioredoxin-like protei 99.6 5.8E-16 2E-20 134.4 8.1 99 204-309 9-120 (149)
92 3idv_A Protein disulfide-isome 99.6 1.4E-15 4.8E-20 141.9 11.3 106 198-311 129-238 (241)
93 2xc2_A Thioredoxinn; oxidoredu 99.6 6.7E-16 2.3E-20 127.8 8.0 99 201-309 15-117 (117)
94 1gh6_A Large T antigen; tumor 99.6 2.8E-17 9.5E-22 134.9 -0.5 65 29-96 7-73 (114)
95 1faa_A Thioredoxin F; electron 99.6 1.3E-15 4.5E-20 127.2 9.5 103 198-309 17-123 (124)
96 2pf4_E Small T antigen; PP2A, 99.6 5.5E-17 1.9E-21 142.1 0.6 66 28-96 9-76 (174)
97 1faf_A Large T antigen; J doma 99.6 3.3E-16 1.1E-20 120.2 4.7 65 29-97 10-76 (79)
98 3m9j_A Thioredoxin; oxidoreduc 99.6 1.8E-15 6.1E-20 122.2 9.1 99 202-309 3-105 (105)
99 3emx_A Thioredoxin; structural 99.6 5.9E-16 2E-20 131.9 6.1 102 198-311 15-127 (135)
100 3ul3_B Thioredoxin, thioredoxi 99.6 7.4E-16 2.5E-20 129.8 6.7 90 211-307 36-127 (128)
101 2f51_A Thioredoxin; electron t 99.6 1.6E-15 5.4E-20 126.1 8.4 107 200-311 4-114 (118)
102 2vim_A Thioredoxin, TRX; thior 99.6 2.2E-15 7.5E-20 121.4 9.0 99 202-309 2-104 (104)
103 2yj7_A LPBCA thioredoxin; oxid 99.4 8.1E-17 2.8E-21 130.0 0.0 101 201-308 3-105 (106)
104 2j23_A Thioredoxin; immune pro 99.6 2.8E-15 9.5E-20 125.0 9.3 102 200-310 16-121 (121)
105 1qgv_A Spliceosomal protein U5 99.6 1.7E-15 5.8E-20 130.4 8.2 102 202-310 6-121 (142)
106 2wz9_A Glutaredoxin-3; protein 99.6 2.8E-15 9.5E-20 130.5 9.6 104 199-311 12-119 (153)
107 3evi_A Phosducin-like protein 99.6 2E-15 7E-20 125.5 8.3 96 201-307 5-111 (118)
108 2l6c_A Thioredoxin; oxidoreduc 99.6 2.5E-15 8.5E-20 123.1 8.6 101 201-311 5-107 (110)
109 2l57_A Uncharacterized protein 99.6 2.4E-15 8.1E-20 126.1 8.4 106 200-311 5-118 (126)
110 3hho_A CO-chaperone protein HS 99.6 8.8E-16 3E-20 136.1 5.7 66 29-94 3-76 (174)
111 2qc7_A ERP31, ERP28, endoplasm 99.6 5.2E-15 1.8E-19 138.2 10.9 103 199-309 5-118 (240)
112 4f9z_D Endoplasmic reticulum r 99.6 1.9E-13 6.6E-18 126.8 21.0 196 201-412 11-223 (227)
113 1ti3_A Thioredoxin H, PTTRXH1; 99.6 3.7E-15 1.3E-19 122.0 8.0 102 199-309 4-111 (113)
114 1n4c_A Auxilin; four helix bun 99.6 8.5E-16 2.9E-20 135.4 3.8 67 25-91 112-182 (182)
115 2es7_A Q8ZP25_salty, putative 99.6 3.5E-15 1.2E-19 128.3 7.5 103 200-311 18-126 (142)
116 1fpo_A HSC20, chaperone protei 99.6 1.9E-15 6.4E-20 133.5 5.4 66 30-95 1-74 (171)
117 1iur_A KIAA0730 protein; DNAJ 99.6 7.3E-16 2.5E-20 120.5 2.1 62 27-88 13-76 (88)
118 2vm1_A Thioredoxin, thioredoxi 99.6 7.5E-15 2.5E-19 121.1 8.3 103 200-311 7-115 (118)
119 3bvo_A CO-chaperone protein HS 99.5 6.5E-16 2.2E-20 140.4 1.6 71 23-93 36-114 (207)
120 3d22_A TRXH4, thioredoxin H-ty 99.5 9.5E-15 3.2E-19 124.6 8.3 104 198-310 23-132 (139)
121 2qwo_B Putative tyrosine-prote 99.5 2.3E-15 8E-20 117.9 4.1 57 28-84 31-91 (92)
122 1zma_A Bacterocin transport ac 99.5 3.6E-15 1.2E-19 123.6 5.1 100 199-306 12-117 (118)
123 1wmj_A Thioredoxin H-type; str 99.5 6.6E-15 2.3E-19 123.7 6.8 105 198-311 13-123 (130)
124 3cxg_A Putative thioredoxin; m 99.5 9E-15 3.1E-19 124.2 6.8 105 198-310 19-129 (133)
125 2dbc_A PDCL2, unnamed protein 99.5 2.7E-14 9.3E-19 121.6 9.2 99 199-308 10-119 (135)
126 1a8l_A Protein disulfide oxido 99.5 2.7E-14 9.1E-19 132.1 9.8 102 201-309 118-225 (226)
127 3qcp_A QSOX from trypanosoma b 99.5 2.2E-15 7.5E-20 152.8 2.3 108 195-307 19-136 (470)
128 1fo5_A Thioredoxin; disulfide 99.5 7.2E-14 2.5E-18 108.1 9.5 82 218-309 3-85 (85)
129 3ag7_A Putative uncharacterize 99.5 6E-15 2.1E-19 119.4 3.1 60 26-86 37-104 (106)
130 3f8u_A Protein disulfide-isome 99.5 4.5E-14 1.6E-18 145.6 10.4 110 197-311 350-462 (481)
131 2trc_P Phosducin, MEKA, PP33; 99.5 2.6E-14 9.1E-19 131.7 7.4 100 200-308 100-211 (217)
132 3uo3_A J-type CO-chaperone JAC 99.5 8.6E-15 2.9E-19 130.2 3.8 68 25-94 6-80 (181)
133 1nho_A Probable thioredoxin; b 99.5 1.1E-13 3.7E-18 107.2 8.8 81 219-309 3-84 (85)
134 1wou_A Thioredoxin -related pr 99.5 8.7E-14 3E-18 116.3 8.6 99 201-307 7-122 (123)
135 2kuc_A Putative disulphide-iso 99.5 5.1E-14 1.7E-18 118.4 7.0 104 202-311 9-122 (130)
136 2guz_A Mitochondrial import in 99.5 7.5E-15 2.6E-19 110.3 1.6 57 29-88 13-70 (71)
137 2djk_A PDI, protein disulfide- 99.5 8.2E-14 2.8E-18 118.3 8.2 103 201-310 8-115 (133)
138 2fwh_A Thiol:disulfide interch 99.5 9.6E-14 3.3E-18 117.8 7.7 101 204-311 17-129 (134)
139 1a0r_P Phosducin, MEKA, PP33; 99.4 1.1E-13 3.6E-18 129.6 8.3 100 200-308 113-224 (245)
140 2ywm_A Glutaredoxin-like prote 99.4 1.5E-13 5.2E-18 127.3 9.3 100 201-310 120-220 (229)
141 2b5e_A Protein disulfide-isome 99.4 7.3E-14 2.5E-18 145.0 7.9 109 197-311 356-468 (504)
142 3uem_A Protein disulfide-isome 99.4 4.9E-12 1.7E-16 125.4 20.5 200 200-413 18-229 (361)
143 1sji_A Calsequestrin 2, calseq 99.4 1.3E-11 4.4E-16 122.0 22.4 200 200-412 124-344 (350)
144 3fk8_A Disulphide isomerase; A 99.4 2.4E-13 8.3E-18 114.9 7.8 89 214-308 26-131 (133)
145 2hls_A Protein disulfide oxido 99.4 5.5E-13 1.9E-17 125.1 10.3 99 203-311 124-227 (243)
146 3us3_A Calsequestrin-1; calciu 99.4 1.6E-11 5.4E-16 122.3 21.0 201 200-412 126-346 (367)
147 2h8l_A Protein disulfide-isome 99.4 3.1E-11 1E-15 113.7 21.8 216 200-438 7-244 (252)
148 3kp8_A Vkorc1/thioredoxin doma 99.3 2.1E-13 7.2E-18 111.1 1.7 74 218-308 13-93 (106)
149 3f9u_A Putative exported cytoc 99.3 1.9E-12 6.5E-17 114.5 5.8 104 201-310 28-166 (172)
150 1lu4_A Soluble secreted antige 99.3 6E-12 2.1E-16 105.9 8.2 87 216-309 23-135 (136)
151 3ec3_A Protein disulfide-isome 99.3 4.5E-10 1.6E-14 105.6 21.5 214 200-438 7-242 (250)
152 3iv4_A Putative oxidoreductase 99.3 8.3E-12 2.8E-16 101.4 7.4 95 201-305 8-111 (112)
153 1zzo_A RV1677; thioredoxin fol 99.3 1.2E-11 4.1E-16 103.8 8.7 102 201-310 10-135 (136)
154 2lst_A Thioredoxin; structural 98.9 5E-13 1.7E-17 112.4 0.0 93 213-310 15-116 (130)
155 1sen_A Thioredoxin-like protei 99.3 2.4E-12 8.2E-17 113.3 4.4 97 207-310 37-148 (164)
156 1ilo_A Conserved hypothetical 99.3 1.1E-11 3.7E-16 94.0 7.3 72 221-305 3-76 (77)
157 2b5x_A YKUV protein, TRXY; thi 99.2 5.8E-11 2E-15 101.2 9.0 101 203-310 16-145 (148)
158 3or5_A Thiol:disulfide interch 99.2 8.5E-11 2.9E-15 102.4 9.7 104 201-311 19-152 (165)
159 3erw_A Sporulation thiol-disul 99.2 3E-11 1E-15 102.6 6.5 84 216-305 33-144 (145)
160 2ju5_A Thioredoxin disulfide i 99.2 4.1E-11 1.4E-15 104.1 7.5 89 215-310 45-152 (154)
161 3hcz_A Possible thiol-disulfid 99.1 2.8E-10 9.6E-15 97.0 11.7 87 216-308 30-144 (148)
162 3dml_A Putative uncharacterize 99.1 2.6E-11 8.9E-16 99.6 3.4 82 218-309 19-109 (116)
163 2lja_A Putative thiol-disulfid 99.1 2.8E-10 9.7E-15 97.7 9.8 90 216-311 29-144 (152)
164 2h30_A Thioredoxin, peptide me 99.1 7.7E-11 2.6E-15 102.6 6.3 105 200-311 22-157 (164)
165 1z6n_A Hypothetical protein PA 99.1 9.8E-11 3.3E-15 103.2 6.7 88 202-296 39-130 (167)
166 3fkf_A Thiol-disulfide oxidore 99.1 3.4E-10 1.2E-14 96.4 9.9 87 216-310 32-146 (148)
167 2f9s_A Thiol-disulfide oxidore 99.1 2.5E-10 8.7E-15 98.0 8.8 90 216-311 25-139 (151)
168 3lwa_A Secreted thiol-disulfid 99.1 3E-10 1E-14 101.1 9.5 88 216-309 58-180 (183)
169 3raz_A Thioredoxin-related pro 99.1 2.2E-10 7.6E-15 98.6 8.1 90 216-311 23-141 (151)
170 2fgx_A Putative thioredoxin; N 99.1 1.2E-10 4.1E-15 94.4 5.7 76 219-305 30-106 (107)
171 2l5o_A Putative thioredoxin; s 99.0 4.2E-10 1.5E-14 96.7 8.5 89 216-310 27-141 (153)
172 3ha9_A Uncharacterized thiored 99.0 4.5E-10 1.5E-14 98.1 8.3 86 216-309 36-163 (165)
173 4evm_A Thioredoxin family prot 99.0 4.2E-10 1.4E-14 94.1 7.7 86 216-307 21-136 (138)
174 3ia1_A THIO-disulfide isomeras 99.0 3.1E-10 1.1E-14 97.7 6.8 86 218-311 31-145 (154)
175 2r2j_A Thioredoxin domain-cont 99.0 1.1E-08 3.9E-13 102.1 18.4 172 201-389 120-302 (382)
176 2b1k_A Thiol:disulfide interch 99.0 3.7E-10 1.3E-14 98.9 6.5 97 205-310 39-160 (168)
177 2lrn_A Thiol:disulfide interch 99.0 8.7E-10 3E-14 94.9 8.8 87 216-310 28-141 (152)
178 3gl3_A Putative thiol:disulfid 99.0 1.4E-09 4.6E-14 93.4 9.6 90 216-311 27-143 (152)
179 3ira_A Conserved protein; meth 99.0 5.6E-10 1.9E-14 98.6 6.8 84 201-291 24-119 (173)
180 1ttz_A Conserved hypothetical 99.0 4E-10 1.4E-14 88.0 4.8 74 221-310 3-77 (87)
181 3ewl_A Uncharacterized conserv 99.0 9.3E-10 3.2E-14 93.4 7.0 86 216-309 26-140 (142)
182 3kp9_A Vkorc1/thioredoxin doma 98.9 1.7E-10 5.9E-15 110.1 2.4 74 220-310 200-280 (291)
183 3kcm_A Thioredoxin family prot 98.9 2E-09 6.7E-14 92.6 8.6 89 216-310 27-143 (154)
184 1kng_A Thiol:disulfide interch 98.9 9.5E-10 3.3E-14 94.7 6.2 85 217-309 42-151 (156)
185 3hdc_A Thioredoxin family prot 98.9 2.9E-09 9.9E-14 92.3 9.2 88 216-309 40-151 (158)
186 3ph9_A Anterior gradient prote 98.9 4.9E-10 1.7E-14 96.9 3.6 93 212-310 39-145 (151)
187 3lor_A Thiol-disulfide isomera 98.9 3.4E-09 1.2E-13 91.6 8.4 89 216-310 29-155 (160)
188 1i5g_A Tryparedoxin II; electr 98.9 1.3E-09 4.6E-14 92.7 5.4 72 216-292 27-125 (144)
189 3eyt_A Uncharacterized protein 98.9 4.3E-09 1.5E-13 90.9 8.0 88 217-310 28-152 (158)
190 2lrt_A Uncharacterized protein 98.9 5.7E-09 1.9E-13 90.0 8.6 81 217-303 35-141 (152)
191 1o73_A Tryparedoxin; electron 98.9 2.9E-09 9.8E-14 90.5 6.4 73 216-293 27-126 (144)
192 3eur_A Uncharacterized protein 98.8 4.2E-09 1.4E-13 89.5 7.3 82 217-306 31-141 (142)
193 3s9f_A Tryparedoxin; thioredox 98.8 3.8E-09 1.3E-13 92.6 6.8 71 216-292 47-145 (165)
194 1o8x_A Tryparedoxin, TRYX, TXN 98.8 3.6E-09 1.2E-13 90.3 6.5 62 216-279 27-115 (146)
195 3fw2_A Thiol-disulfide oxidore 98.8 1.5E-08 5.1E-13 86.9 10.2 86 216-309 32-147 (150)
196 3kh7_A Thiol:disulfide interch 98.8 8.8E-09 3E-13 91.2 8.5 86 216-310 57-167 (176)
197 2ywi_A Hypothetical conserved 98.8 6.1E-09 2.1E-13 93.5 7.5 86 219-310 48-174 (196)
198 2cvb_A Probable thiol-disulfid 98.8 9.2E-09 3.2E-13 91.8 8.6 89 216-310 32-159 (188)
199 2hyx_A Protein DIPZ; thioredox 98.8 1.4E-08 4.8E-13 100.0 9.5 88 216-309 81-198 (352)
200 1jfu_A Thiol:disulfide interch 98.8 2.1E-08 7.1E-13 89.2 8.9 89 216-310 59-180 (186)
201 1hyu_A AHPF, alkyl hydroperoxi 98.7 3.3E-08 1.1E-12 102.7 10.8 96 202-308 102-198 (521)
202 2lus_A Thioredoxion; CR-Trp16, 98.2 1.3E-09 4.3E-14 92.5 0.0 73 217-295 25-127 (143)
203 3u5r_E Uncharacterized protein 98.7 2.5E-08 8.4E-13 91.6 8.6 85 219-310 61-187 (218)
204 2y4t_A DNAJ homolog subfamily 98.7 1.2E-08 4E-13 102.4 5.7 66 28-93 380-449 (450)
205 4f9z_D Endoplasmic reticulum r 98.7 9.6E-08 3.3E-12 88.2 11.4 107 199-310 113-225 (227)
206 4fo5_A Thioredoxin-like protei 98.7 4.1E-08 1.4E-12 83.3 7.3 83 216-306 31-141 (143)
207 1wjk_A C330018D20RIK protein; 98.6 1.6E-08 5.4E-13 81.0 4.2 78 218-310 16-96 (100)
208 2dlx_A UBX domain-containing p 98.6 2.6E-07 9E-12 79.8 11.3 91 213-309 38-135 (153)
209 2ls5_A Uncharacterized protein 98.0 4.3E-09 1.5E-13 91.1 0.0 85 216-307 32-145 (159)
210 2rli_A SCO2 protein homolog, m 98.6 1.1E-07 3.6E-12 83.2 8.9 88 217-310 26-164 (171)
211 2guz_B Mitochondrial import in 98.6 3.8E-08 1.3E-12 71.6 4.9 53 30-85 4-59 (65)
212 2p5q_A Glutathione peroxidase 98.6 7.3E-08 2.5E-12 84.0 7.4 89 216-310 31-168 (170)
213 2ggt_A SCO1 protein homolog, m 98.6 9E-08 3.1E-12 82.9 7.5 88 217-310 23-161 (164)
214 2k8s_A Thioredoxin; dimer, str 98.6 7.3E-09 2.5E-13 79.2 0.2 57 220-278 3-61 (80)
215 2e7p_A Glutaredoxin; thioredox 98.6 1.6E-08 5.4E-13 82.8 2.2 83 211-308 14-106 (116)
216 2k6v_A Putative cytochrome C o 98.6 7.7E-08 2.6E-12 84.0 6.6 87 216-309 34-172 (172)
217 3dwv_A Glutathione peroxidase- 98.5 5.4E-07 1.9E-11 80.3 11.8 89 216-310 45-183 (187)
218 3drn_A Peroxiredoxin, bacterio 98.5 1.7E-07 6E-12 81.3 7.6 84 217-306 28-145 (161)
219 2vup_A Glutathione peroxidase- 98.5 3E-07 1E-11 82.2 8.9 89 216-310 47-185 (190)
220 1ego_A Glutaredoxin; electron 98.5 1.1E-07 3.8E-12 73.0 5.1 73 221-308 3-82 (85)
221 3cmi_A Peroxiredoxin HYR1; thi 98.5 1.6E-07 5.5E-12 82.4 6.7 89 216-310 31-168 (171)
222 2v1m_A Glutathione peroxidase; 98.5 3.1E-07 1.1E-11 79.9 8.3 88 216-309 30-166 (169)
223 1we0_A Alkyl hydroperoxide red 98.5 3.9E-07 1.3E-11 81.2 8.8 87 217-309 31-156 (187)
224 1zof_A Alkyl hydroperoxide-red 98.5 3.4E-07 1.2E-11 82.3 8.4 87 216-308 32-159 (198)
225 2bmx_A Alkyl hydroperoxidase C 98.5 4.4E-07 1.5E-11 81.5 9.0 88 217-310 45-170 (195)
226 2p31_A CL683, glutathione pero 98.5 2.4E-07 8.3E-12 82.1 7.1 88 216-309 48-180 (181)
227 2qsi_A Putative hydrogenase ex 98.4 5.7E-07 2E-11 75.7 8.6 97 315-413 19-122 (137)
228 1xvw_A Hypothetical protein RV 98.4 5.1E-07 1.7E-11 77.9 7.6 83 219-307 38-157 (160)
229 3aps_A DNAJ homolog subfamily 98.4 1.7E-06 5.9E-11 70.9 9.7 92 328-420 19-119 (122)
230 2obi_A PHGPX, GPX-4, phospholi 98.4 6.5E-07 2.2E-11 79.4 7.2 42 216-257 46-89 (183)
231 2qgv_A Hydrogenase-1 operon pr 98.3 5.3E-07 1.8E-11 76.2 5.8 95 314-411 20-122 (140)
232 3ga4_A Dolichyl-diphosphooligo 98.3 3.4E-06 1.2E-10 74.4 10.4 83 310-393 17-116 (178)
233 2gs3_A PHGPX, GPX-4, phospholi 98.3 1.2E-06 4E-11 77.9 7.5 42 216-257 48-91 (185)
234 3kij_A Probable glutathione pe 98.3 1.7E-06 5.8E-11 76.5 8.5 90 216-309 37-169 (180)
235 2f8a_A Glutathione peroxidase 98.3 1.2E-06 4.3E-11 79.6 7.4 42 216-257 46-89 (208)
236 2l4c_A Endoplasmic reticulum r 98.3 6.1E-06 2.1E-10 68.5 10.7 97 199-308 21-122 (124)
237 1qmv_A Human thioredoxin perox 98.3 1.6E-06 5.3E-11 78.0 7.6 87 217-309 34-162 (197)
238 3h79_A Thioredoxin-like protei 98.2 1.1E-05 3.6E-10 66.8 11.5 84 328-412 31-126 (127)
239 2h01_A 2-Cys peroxiredoxin; th 98.2 3.6E-06 1.2E-10 75.2 9.2 87 216-308 30-157 (192)
240 3gnj_A Thioredoxin domain prot 98.2 9E-06 3.1E-10 65.1 10.6 84 328-412 20-108 (111)
241 3zzx_A Thioredoxin; oxidoreduc 98.2 3.5E-06 1.2E-10 67.8 8.0 88 321-411 11-103 (105)
242 1thx_A Thioredoxin, thioredoxi 98.2 1.3E-05 4.4E-10 64.6 11.6 101 309-412 5-111 (115)
243 2djk_A PDI, protein disulfide- 98.2 5.7E-06 2E-10 69.4 9.5 100 328-438 21-129 (133)
244 3gyk_A 27KDA outer membrane pr 98.2 1.8E-06 6.1E-11 75.9 6.6 81 217-309 22-172 (175)
245 1zye_A Thioredoxin-dependent p 98.2 3.8E-06 1.3E-10 77.0 8.5 87 217-309 56-184 (220)
246 1uul_A Tryparedoxin peroxidase 98.2 2.8E-06 9.7E-11 76.6 7.3 87 217-309 36-164 (202)
247 1t00_A Thioredoxin, TRX; redox 98.2 1.3E-05 4.3E-10 64.5 10.5 83 328-411 21-108 (112)
248 1xzo_A BSSCO, hypothetical pro 98.2 1.3E-05 4.3E-10 69.9 11.2 89 216-310 32-172 (174)
249 2jsy_A Probable thiol peroxida 98.2 5.5E-06 1.9E-10 72.0 8.8 87 217-308 44-165 (167)
250 2dml_A Protein disulfide-isome 98.2 2.7E-05 9.1E-10 64.4 12.6 83 328-411 33-121 (130)
251 1eej_A Thiol:disulfide interch 98.1 2.6E-06 9E-11 77.9 6.4 79 217-308 86-209 (216)
252 3hz4_A Thioredoxin; NYSGXRC, P 98.1 1.3E-05 4.3E-10 67.7 10.0 91 327-418 21-116 (140)
253 1nm3_A Protein HI0572; hybrid, 98.1 2.1E-05 7.1E-10 72.9 12.2 42 217-258 33-79 (241)
254 2es7_A Q8ZP25_salty, putative 98.1 5.4E-06 1.8E-10 70.6 7.5 111 313-434 19-138 (142)
255 3p2a_A Thioredoxin 2, putative 98.1 1.9E-05 6.3E-10 67.2 10.9 84 328-412 53-141 (148)
256 3hxs_A Thioredoxin, TRXP; elec 98.1 2.3E-05 7.7E-10 65.9 10.8 82 329-411 50-136 (141)
257 2b7k_A SCO1 protein; metalloch 98.1 7.2E-06 2.4E-10 73.9 8.0 89 217-309 41-178 (200)
258 2i81_A 2-Cys peroxiredoxin; st 98.1 5E-06 1.7E-10 75.8 7.0 87 217-309 52-179 (213)
259 2trx_A Thioredoxin; electron t 98.1 2.3E-05 7.9E-10 62.4 10.1 84 328-412 18-106 (108)
260 3tco_A Thioredoxin (TRXA-1); d 98.1 1.2E-05 4.3E-10 63.9 8.5 83 329-412 20-107 (109)
261 2ppt_A Thioredoxin-2; thiredox 98.1 1.7E-05 5.7E-10 68.4 9.9 84 328-412 62-150 (155)
262 3die_A Thioredoxin, TRX; elect 98.1 1.5E-05 5.2E-10 63.1 8.9 81 329-410 18-103 (106)
263 3qfa_C Thioredoxin; protein-pr 98.1 1.4E-05 4.8E-10 65.1 8.8 80 329-411 30-114 (116)
264 2l5l_A Thioredoxin; structural 98.1 2.7E-05 9.4E-10 65.2 10.6 83 329-412 37-124 (136)
265 2o8v_B Thioredoxin 1; disulfid 98.0 1.4E-05 4.9E-10 66.4 8.7 83 328-412 38-126 (128)
266 1t3b_A Thiol:disulfide interch 98.0 5.2E-06 1.8E-10 75.6 6.4 78 217-307 86-208 (211)
267 1w4v_A Thioredoxin, mitochondr 98.0 4E-05 1.4E-09 62.6 10.8 83 328-412 29-117 (119)
268 1nsw_A Thioredoxin, TRX; therm 98.0 1.3E-05 4.3E-10 63.6 7.4 81 327-409 14-100 (105)
269 2i4a_A Thioredoxin; acidophIle 98.0 3E-05 1E-09 61.4 9.7 82 328-410 18-104 (107)
270 2dj0_A Thioredoxin-related tra 98.0 5.2E-06 1.8E-10 69.8 5.4 106 313-419 9-126 (137)
271 1fb6_A Thioredoxin M; electron 98.0 4.1E-05 1.4E-09 60.4 10.4 83 328-411 16-103 (105)
272 1x5d_A Protein disulfide-isome 98.0 3.6E-05 1.2E-09 63.8 10.5 84 328-412 23-115 (133)
273 2dj1_A Protein disulfide-isome 98.0 3.9E-05 1.3E-09 64.3 10.8 83 328-412 32-122 (140)
274 2av4_A Thioredoxin-like protei 98.0 1.1E-05 3.7E-10 69.3 7.1 84 328-412 39-137 (160)
275 1dby_A Chloroplast thioredoxin 98.0 3.8E-05 1.3E-09 61.0 10.1 83 328-411 17-104 (107)
276 3ztl_A Thioredoxin peroxidase; 98.0 1.2E-05 4E-10 73.8 7.7 86 216-307 68-195 (222)
277 3uvt_A Thioredoxin domain-cont 98.0 3E-05 1E-09 61.9 9.1 95 313-411 7-109 (111)
278 1oaz_A Thioredoxin 1; immune s 98.0 9.5E-06 3.2E-10 67.0 6.2 82 328-410 19-119 (123)
279 2voc_A Thioredoxin; electron t 98.0 2.2E-05 7.4E-10 63.4 8.2 78 329-408 16-99 (112)
280 2pu9_C TRX-F, thioredoxin F-ty 98.0 7.1E-05 2.4E-09 60.0 11.2 95 316-412 10-109 (111)
281 3m9j_A Thioredoxin; oxidoreduc 98.0 3.3E-05 1.1E-09 61.0 9.1 81 328-411 18-103 (105)
282 2yzu_A Thioredoxin; redox prot 98.0 2.4E-05 8.3E-10 62.1 8.2 82 328-410 16-102 (109)
283 3gkn_A Bacterioferritin comigr 98.0 1.6E-05 5.5E-10 68.6 7.5 86 217-308 35-160 (163)
284 2e0q_A Thioredoxin; electron t 97.9 3.7E-05 1.3E-09 60.3 9.0 83 328-412 14-101 (104)
285 3ul3_B Thioredoxin, thioredoxi 97.9 3.4E-05 1.1E-09 63.9 9.1 83 327-410 39-126 (128)
286 2i1u_A Thioredoxin, TRX, MPT46 97.9 1.8E-05 6.1E-10 64.5 7.1 80 328-408 28-112 (121)
287 2c0g_A ERP29 homolog, windbeut 97.9 3.9E-05 1.3E-09 71.4 10.0 98 313-413 18-131 (248)
288 2h8l_A Protein disulfide-isome 97.9 2.3E-05 7.8E-10 73.2 8.4 99 331-445 25-133 (252)
289 1r7h_A NRDH-redoxin; thioredox 97.9 9.5E-06 3.2E-10 60.3 4.6 67 221-305 3-73 (75)
290 1xwb_A Thioredoxin; dimerizati 97.9 4.2E-05 1.4E-09 60.5 8.6 80 329-410 19-103 (106)
291 3qou_A Protein YBBN; thioredox 97.9 6.1E-05 2.1E-09 71.4 11.3 98 313-411 9-111 (287)
292 1faa_A Thioredoxin F; electron 97.9 8.1E-05 2.8E-09 60.9 10.4 97 313-411 20-121 (124)
293 2i3y_A Epididymal secretory gl 97.9 4.8E-05 1.6E-09 69.4 9.7 42 216-257 55-97 (215)
294 1gh2_A Thioredoxin-like protei 97.9 8.2E-05 2.8E-09 59.2 10.0 81 328-411 19-104 (107)
295 3apq_A DNAJ homolog subfamily 97.9 7.2E-05 2.5E-09 67.7 10.6 84 328-412 112-200 (210)
296 3ed3_A Protein disulfide-isome 97.9 5E-05 1.7E-09 72.8 9.9 86 328-413 33-141 (298)
297 1ep7_A Thioredoxin CH1, H-type 97.9 5.1E-05 1.8E-09 60.7 8.5 81 330-412 24-109 (112)
298 4euy_A Uncharacterized protein 97.9 3E-05 1E-09 61.7 7.0 81 328-410 16-101 (105)
299 1v58_A Thiol:disulfide interch 97.9 1.8E-05 6.2E-10 73.5 6.4 85 217-309 97-232 (241)
300 1v98_A Thioredoxin; oxidoreduc 97.8 7.5E-05 2.6E-09 62.7 9.7 79 333-412 53-136 (140)
301 2vlu_A Thioredoxin, thioredoxi 97.8 8E-05 2.7E-09 60.7 9.3 81 329-412 33-118 (122)
302 1kte_A Thioltransferase; redox 97.8 7.6E-06 2.6E-10 65.4 2.9 54 220-278 13-74 (105)
303 3d6i_A Monothiol glutaredoxin- 97.8 0.00016 5.3E-09 58.0 10.8 85 328-414 19-109 (112)
304 2j23_A Thioredoxin; immune pro 97.8 9.8E-05 3.4E-09 60.4 9.6 82 328-411 31-118 (121)
305 2qc7_A ERP31, ERP28, endoplasm 97.8 8.7E-05 3E-09 68.8 10.2 85 328-412 20-117 (240)
306 1xvq_A Thiol peroxidase; thior 97.8 6.5E-05 2.2E-09 65.9 8.9 69 217-291 44-143 (175)
307 2vim_A Thioredoxin, TRX; thior 97.8 0.00013 4.4E-09 57.3 9.8 80 329-411 18-102 (104)
308 3h93_A Thiol:disulfide interch 97.8 2.6E-05 8.9E-10 69.5 6.2 41 216-256 24-65 (192)
309 3hd5_A Thiol:disulfide interch 97.8 2.9E-05 1E-09 69.4 6.5 42 216-257 24-66 (195)
310 1r26_A Thioredoxin; redox-acti 97.8 0.00011 3.9E-09 60.6 9.6 81 328-411 35-120 (125)
311 3f3q_A Thioredoxin-1; His TAG, 97.8 0.00018 6.3E-09 57.5 10.4 82 327-411 21-107 (109)
312 2r37_A Glutathione peroxidase 97.8 9.5E-05 3.3E-09 67.0 9.6 41 216-257 37-79 (207)
313 1x5e_A Thioredoxin domain cont 97.7 0.00014 4.9E-09 59.6 9.5 76 333-410 25-106 (126)
314 1mek_A Protein disulfide isome 97.7 7.7E-05 2.6E-09 60.2 7.5 81 329-410 23-113 (120)
315 1h75_A Glutaredoxin-like prote 97.7 1.8E-05 6.1E-10 59.9 3.2 69 221-307 3-75 (81)
316 4g2e_A Peroxiredoxin; redox pr 97.7 3.1E-05 1E-09 66.8 5.0 42 217-258 30-74 (157)
317 2c0d_A Thioredoxin peroxidase 97.7 8E-05 2.7E-09 68.2 8.1 86 217-308 56-182 (221)
318 3gix_A Thioredoxin-like protei 97.7 0.00011 3.7E-09 62.9 8.3 85 328-413 21-120 (149)
319 2xc2_A Thioredoxinn; oxidoredu 97.7 0.00018 6.1E-09 58.2 9.1 79 329-411 32-115 (117)
320 3dxb_A Thioredoxin N-terminall 97.7 0.00015 5.2E-09 66.1 9.5 85 327-412 27-116 (222)
321 2l57_A Uncharacterized protein 97.7 0.00029 9.8E-09 57.8 10.1 82 327-409 23-112 (126)
322 1un2_A DSBA, thiol-disulfide i 97.7 5.6E-06 1.9E-10 74.6 -0.5 43 217-259 113-159 (197)
323 2cq9_A GLRX2 protein, glutared 97.6 6.8E-05 2.3E-09 62.6 6.3 63 205-278 16-86 (130)
324 2oe3_A Thioredoxin-3; electron 97.6 0.00012 4E-09 59.4 7.5 80 328-410 28-112 (114)
325 2dj3_A Protein disulfide-isome 97.6 0.00016 5.4E-09 59.9 8.5 83 329-412 24-116 (133)
326 1syr_A Thioredoxin; SGPP, stru 97.6 0.00013 4.6E-09 58.5 7.5 80 328-410 24-108 (112)
327 3ixr_A Bacterioferritin comigr 97.6 0.00014 4.9E-09 64.0 7.9 87 217-307 51-175 (179)
328 4gqc_A Thiol peroxidase, perox 97.6 5.4E-05 1.9E-09 65.8 4.8 88 215-308 31-158 (164)
329 2wz9_A Glutaredoxin-3; protein 97.6 0.00039 1.3E-08 59.3 10.0 80 329-411 31-115 (153)
330 2l6c_A Thioredoxin; oxidoreduc 97.6 0.00042 1.4E-08 55.5 9.5 81 328-410 17-102 (110)
331 3bj5_A Protein disulfide-isome 97.5 0.00035 1.2E-08 59.5 9.4 111 199-312 14-129 (147)
332 3ec3_A Protein disulfide-isome 97.5 0.00013 4.6E-09 67.9 7.2 91 331-437 26-127 (250)
333 2djj_A PDI, protein disulfide- 97.5 0.00048 1.6E-08 55.8 9.4 80 328-411 23-114 (121)
334 2znm_A Thiol:disulfide interch 97.5 0.00044 1.5E-08 61.5 10.0 40 217-256 22-62 (195)
335 2pn8_A Peroxiredoxin-4; thiore 97.5 0.00017 5.9E-09 65.4 7.4 86 217-308 48-175 (211)
336 1xfl_A Thioredoxin H1; AT3G510 97.5 0.00038 1.3E-08 57.2 8.9 80 329-411 37-121 (124)
337 2hze_A Glutaredoxin-1; thiored 97.5 1.9E-05 6.5E-10 64.3 0.7 54 220-278 20-81 (114)
338 2f51_A Thioredoxin; electron t 97.5 0.00056 1.9E-08 55.6 9.6 80 329-411 22-110 (118)
339 1n8j_A AHPC, alkyl hydroperoxi 97.5 0.00019 6.7E-09 63.6 7.3 86 217-308 30-154 (186)
340 2klx_A Glutaredoxin; thioredox 97.5 7.1E-05 2.4E-09 57.8 3.9 51 220-278 7-61 (89)
341 1fo5_A Thioredoxin; disulfide 97.5 0.00036 1.2E-08 52.6 7.8 75 332-411 4-83 (85)
342 2ht9_A Glutaredoxin-2; thiored 97.5 0.00011 3.6E-09 62.8 5.1 62 206-278 39-108 (146)
343 3q6o_A Sulfhydryl oxidase 1; p 97.5 0.00092 3.1E-08 61.7 11.9 85 328-412 28-125 (244)
344 1qgv_A Spliceosomal protein U5 97.5 0.00025 8.6E-09 60.0 7.3 63 329-392 22-89 (142)
345 3me7_A Putative uncharacterize 97.4 0.00035 1.2E-08 60.9 8.2 88 217-310 28-162 (170)
346 1nho_A Probable thioredoxin; b 97.4 0.00055 1.9E-08 51.5 8.3 75 332-411 3-82 (85)
347 1ti3_A Thioredoxin H, PTTRXH1; 97.4 0.00036 1.2E-08 55.7 7.5 82 329-413 25-111 (113)
348 3a2v_A Probable peroxiredoxin; 97.4 0.00013 4.4E-09 68.0 5.3 84 219-308 36-160 (249)
349 3tjj_A Peroxiredoxin-4; thiore 97.4 0.0005 1.7E-08 64.2 9.2 85 217-307 91-217 (254)
350 1wou_A Thioredoxin -related pr 97.4 0.0004 1.4E-08 56.9 7.4 61 329-389 23-101 (123)
351 2a4v_A Peroxiredoxin DOT5; yea 97.4 0.00034 1.1E-08 60.0 7.2 54 218-274 36-113 (159)
352 2yzh_A Probable thiol peroxida 97.4 0.00024 8.3E-09 61.8 6.4 42 217-259 47-90 (171)
353 2fwh_A Thiol:disulfide interch 97.4 0.00064 2.2E-08 56.6 8.7 81 329-410 30-124 (134)
354 3qpm_A Peroxiredoxin; oxidored 97.4 0.00039 1.3E-08 64.4 7.9 85 217-307 77-203 (240)
355 2vm1_A Thioredoxin, thioredoxi 97.3 0.0011 3.7E-08 53.3 9.4 81 329-412 27-112 (118)
356 2yan_A Glutaredoxin-3; oxidore 97.3 0.00019 6.6E-09 57.3 4.5 61 207-278 8-78 (105)
357 3d22_A TRXH4, thioredoxin H-ty 97.3 0.00098 3.3E-08 55.5 8.9 81 329-413 45-131 (139)
358 3p7x_A Probable thiol peroxida 97.3 0.00041 1.4E-08 60.0 6.5 41 217-259 46-88 (166)
359 3cxg_A Putative thioredoxin; m 97.2 0.00064 2.2E-08 56.6 7.3 80 328-411 38-126 (133)
360 1zma_A Bacterocin transport ac 97.2 0.00048 1.6E-08 55.8 6.4 82 328-409 27-116 (118)
361 3emx_A Thioredoxin; structural 97.2 0.00053 1.8E-08 57.2 6.7 77 332-410 33-122 (135)
362 1q98_A Thiol peroxidase, TPX; 97.2 0.00034 1.2E-08 60.5 5.7 51 217-268 43-98 (165)
363 2yj7_A LPBCA thioredoxin; oxid 96.3 5.3E-05 1.8E-09 59.6 0.0 82 328-410 17-103 (106)
364 3fk8_A Disulphide isomerase; A 97.2 0.0016 5.5E-08 53.7 9.2 85 328-412 27-131 (133)
365 3ic4_A Glutaredoxin (GRX-1); s 97.2 0.00028 9.5E-09 54.6 4.0 68 221-306 14-91 (92)
366 2lqo_A Putative glutaredoxin R 97.2 0.00098 3.4E-08 51.9 7.0 73 220-309 5-83 (92)
367 2l4c_A Endoplasmic reticulum r 97.1 0.0015 5.1E-08 53.9 8.4 75 331-411 40-121 (124)
368 1z6m_A Conserved hypothetical 97.1 0.00093 3.2E-08 58.2 7.2 40 217-256 27-69 (175)
369 3qmx_A Glutaredoxin A, glutare 97.1 0.00035 1.2E-08 55.2 3.7 52 219-278 16-73 (99)
370 3c1r_A Glutaredoxin-1; oxidize 97.1 0.00042 1.4E-08 56.7 4.3 65 206-278 15-88 (118)
371 1lu4_A Soluble secreted antige 97.1 0.0044 1.5E-07 50.7 10.6 82 329-411 23-133 (136)
372 1fov_A Glutaredoxin 3, GRX3; a 97.0 0.00036 1.2E-08 52.4 3.4 50 221-278 3-57 (82)
373 3rhb_A ATGRXC5, glutaredoxin-C 97.0 0.00032 1.1E-08 56.7 3.2 61 208-278 10-79 (113)
374 3t58_A Sulfhydryl oxidase 1; o 97.0 0.003 1E-07 65.2 11.2 85 328-412 28-125 (519)
375 2kuc_A Putative disulphide-iso 97.0 0.003 1E-07 51.7 9.1 82 329-410 26-117 (130)
376 3qcp_A QSOX from trypanosoma b 97.0 0.0013 4.3E-08 66.7 8.0 88 313-401 25-127 (470)
377 3zrd_A Thiol peroxidase; oxido 97.0 0.0011 3.7E-08 59.5 6.6 54 217-271 78-136 (200)
378 1psq_A Probable thiol peroxida 97.0 0.00052 1.8E-08 59.1 4.3 55 216-271 41-100 (163)
379 2khp_A Glutaredoxin; thioredox 97.0 0.00042 1.4E-08 53.6 3.2 51 220-278 7-62 (92)
380 1zzo_A RV1677; thioredoxin fol 96.9 0.009 3.1E-07 48.6 11.3 82 329-411 24-132 (136)
381 3nzn_A Glutaredoxin; structura 96.9 0.00084 2.9E-08 53.3 4.6 70 219-305 22-101 (103)
382 1tp9_A Peroxiredoxin, PRX D (t 96.9 0.00066 2.3E-08 58.6 4.3 53 217-269 35-95 (162)
383 1wmj_A Thioredoxin H-type; str 96.9 0.00099 3.4E-08 54.5 5.1 79 329-410 35-118 (130)
384 3mng_A Peroxiredoxin-5, mitoch 96.9 0.0011 3.7E-08 58.1 5.6 55 217-271 43-106 (173)
385 1hyu_A AHPF, alkyl hydroperoxi 96.9 0.017 5.8E-07 59.5 15.5 170 217-409 18-195 (521)
386 3gv1_A Disulfide interchange p 96.8 0.0013 4.6E-08 55.9 5.6 81 215-310 12-139 (147)
387 2rem_A Disulfide oxidoreductas 96.8 0.0032 1.1E-07 55.6 8.3 40 217-256 25-65 (193)
388 2b5x_A YKUV protein, TRXY; thi 96.8 0.012 4.2E-07 48.7 11.3 83 329-411 28-142 (148)
389 4dvc_A Thiol:disulfide interch 96.7 0.004 1.4E-07 54.3 8.2 39 217-255 21-60 (184)
390 2dbc_A PDCL2, unnamed protein 96.7 0.0053 1.8E-07 51.1 8.1 64 330-398 30-98 (135)
391 2ec4_A FAS-associated factor 1 96.6 0.0069 2.3E-07 53.2 8.6 92 214-308 52-166 (178)
392 3msz_A Glutaredoxin 1; alpha-b 96.6 0.0017 5.9E-08 49.4 4.1 72 220-309 5-86 (89)
393 3hz8_A Thiol:disulfide interch 96.6 0.0011 3.7E-08 59.1 3.2 43 217-259 24-67 (193)
394 3evi_A Phosducin-like protein 96.6 0.0054 1.9E-07 50.0 7.2 61 331-396 24-89 (118)
395 1prx_A HORF6; peroxiredoxin, h 96.5 0.0085 2.9E-07 54.6 8.8 86 219-308 34-167 (224)
396 2wfc_A Peroxiredoxin 5, PRDX5; 96.5 0.0024 8.2E-08 55.5 4.9 55 217-271 31-94 (167)
397 2f9s_A Thiol-disulfide oxidore 96.4 0.031 1.1E-06 46.6 11.4 82 329-410 25-134 (151)
398 1wik_A Thioredoxin-like protei 96.4 0.0031 1.1E-07 50.5 4.6 60 208-278 7-76 (109)
399 2v2g_A Peroxiredoxin 6; oxidor 96.4 0.0051 1.7E-07 56.6 6.5 40 219-258 31-73 (233)
400 2pwj_A Mitochondrial peroxired 96.4 0.0017 5.9E-08 56.5 3.2 55 218-274 45-107 (171)
401 3hcz_A Possible thiol-disulfid 96.3 0.046 1.6E-06 45.1 11.7 84 329-415 30-144 (148)
402 2lst_A Thioredoxin; structural 95.3 0.00065 2.2E-08 55.9 0.0 79 328-406 17-108 (130)
403 3h8q_A Thioredoxin reductase 3 96.2 0.0031 1E-07 51.0 3.8 62 206-278 7-76 (114)
404 1xcc_A 1-Cys peroxiredoxin; un 96.2 0.0053 1.8E-07 55.9 5.7 84 219-308 34-164 (220)
405 4hde_A SCO1/SENC family lipopr 96.2 0.017 5.7E-07 50.1 8.6 42 216-257 31-77 (170)
406 3uma_A Hypothetical peroxiredo 96.2 0.0034 1.2E-07 55.5 4.1 53 219-271 59-119 (184)
407 2trc_P Phosducin, MEKA, PP33; 96.2 0.0031 1.1E-07 57.3 3.9 66 330-398 120-190 (217)
408 2ju5_A Thioredoxin disulfide i 96.1 0.03 1E-06 47.5 9.8 82 329-411 46-149 (154)
409 3or5_A Thiol:disulfide interch 96.1 0.055 1.9E-06 45.7 11.5 81 329-410 33-147 (165)
410 3ctg_A Glutaredoxin-2; reduced 96.1 0.0054 1.8E-07 50.9 4.7 66 206-278 27-100 (129)
411 1ilo_A Conserved hypothetical 96.1 0.027 9.1E-07 41.1 8.2 57 344-408 18-75 (77)
412 2l5o_A Putative thioredoxin; s 96.1 0.069 2.4E-06 44.5 11.8 82 329-410 27-137 (153)
413 2lrn_A Thiol:disulfide interch 96.1 0.056 1.9E-06 45.2 11.2 65 329-393 28-122 (152)
414 3erw_A Sporulation thiol-disul 96.1 0.025 8.5E-07 46.6 8.8 80 329-408 33-143 (145)
415 3iv4_A Putative oxidoreductase 96.1 0.016 5.4E-07 46.6 7.0 75 330-407 24-109 (112)
416 2lja_A Putative thiol-disulfid 96.1 0.058 2E-06 44.9 11.2 81 329-409 29-138 (152)
417 3bj5_A Protein disulfide-isome 96.0 0.052 1.8E-06 45.9 10.6 114 313-438 16-141 (147)
418 3l9v_A Putative thiol-disulfid 96.0 0.0011 3.7E-08 58.9 0.0 41 218-258 15-59 (189)
419 4evm_A Thioredoxin family prot 96.0 0.034 1.2E-06 45.0 9.1 83 329-411 21-136 (138)
420 3keb_A Probable thiol peroxida 95.9 0.032 1.1E-06 50.7 9.4 84 217-308 48-174 (224)
421 3gl3_A Putative thiol:disulfid 95.9 0.089 3E-06 43.7 11.4 66 329-394 27-119 (152)
422 3fkf_A Thiol-disulfide oxidore 95.8 0.059 2E-06 44.4 10.0 65 329-393 32-127 (148)
423 1o8x_A Tryparedoxin, TRYX, TXN 95.7 0.042 1.4E-06 45.7 8.7 65 329-393 27-122 (146)
424 3dml_A Putative uncharacterize 95.7 0.013 4.6E-07 47.5 5.2 83 331-413 19-109 (116)
425 3ha9_A Uncharacterized thiored 95.6 0.09 3.1E-06 44.5 10.6 81 329-411 36-161 (165)
426 1o73_A Tryparedoxin; electron 95.6 0.065 2.2E-06 44.2 9.3 65 329-393 27-122 (144)
427 3ira_A Conserved protein; meth 95.5 0.061 2.1E-06 46.8 9.1 68 325-393 34-117 (173)
428 1a0r_P Phosducin, MEKA, PP33; 95.5 0.021 7.3E-07 52.7 6.5 60 329-391 132-196 (245)
429 3feu_A Putative lipoprotein; a 95.5 0.0035 1.2E-07 55.3 1.1 39 217-257 22-61 (185)
430 3f9u_A Putative exported cytoc 95.5 0.069 2.4E-06 45.8 9.4 84 328-412 45-164 (172)
431 1i5g_A Tryparedoxin II; electr 95.4 0.05 1.7E-06 45.0 8.2 65 329-393 27-122 (144)
432 1sen_A Thioredoxin-like protei 95.4 0.024 8.4E-07 48.7 6.3 85 328-412 44-146 (164)
433 3raz_A Thioredoxin-related pro 95.4 0.11 3.8E-06 43.3 10.3 84 329-412 23-138 (151)
434 3fw2_A Thiol-disulfide oxidore 95.4 0.19 6.4E-06 41.8 11.6 81 329-411 32-145 (150)
435 3hdc_A Thioredoxin family prot 95.3 0.098 3.4E-06 44.0 9.7 71 329-399 40-135 (158)
436 3lwa_A Secreted thiol-disulfid 95.3 0.18 6.2E-06 43.5 11.7 84 329-412 58-179 (183)
437 3s9f_A Tryparedoxin; thioredox 95.2 0.045 1.5E-06 46.9 7.3 65 329-393 47-142 (165)
438 2fgx_A Putative thioredoxin; N 95.1 0.048 1.6E-06 43.5 6.7 73 331-409 29-106 (107)
439 3ia1_A THIO-disulfide isomeras 95.1 0.072 2.5E-06 44.5 8.3 78 331-410 31-140 (154)
440 3lor_A Thiol-disulfide isomera 95.1 0.14 4.9E-06 42.8 10.0 82 330-411 30-152 (160)
441 3sbc_A Peroxiredoxin TSA1; alp 95.0 0.029 9.9E-07 50.7 5.6 86 217-306 52-177 (216)
442 1kng_A Thiol:disulfide interch 95.0 0.15 5.1E-06 42.4 9.9 85 329-413 41-151 (156)
443 3ph9_A Anterior gradient prote 94.7 0.071 2.4E-06 45.3 7.0 92 327-419 41-147 (151)
444 3kcm_A Thioredoxin family prot 94.6 0.17 5.8E-06 42.0 9.3 71 329-399 27-126 (154)
445 3kh7_A Thiol:disulfide interch 94.6 0.36 1.2E-05 41.5 11.5 85 329-413 57-166 (176)
446 3kp8_A Vkorc1/thioredoxin doma 94.5 0.073 2.5E-06 42.1 6.3 67 332-407 14-88 (106)
447 2ywi_A Hypothetical conserved 94.5 0.23 7.9E-06 43.2 10.3 81 332-412 48-172 (196)
448 2cvb_A Probable thiol-disulfid 94.4 0.23 7.9E-06 43.0 10.0 65 330-394 33-130 (188)
449 3l4n_A Monothiol glutaredoxin- 94.4 0.034 1.2E-06 45.8 4.1 64 207-278 5-76 (127)
450 2dlx_A UBX domain-containing p 94.2 0.27 9.3E-06 41.7 9.7 88 327-418 39-137 (153)
451 2wci_A Glutaredoxin-4; redox-a 94.1 0.028 9.6E-07 46.9 3.1 61 207-278 26-96 (135)
452 2b1k_A Thiol:disulfide interch 94.1 0.47 1.6E-05 40.0 11.2 82 329-413 50-159 (168)
453 3eyt_A Uncharacterized protein 94.1 0.33 1.1E-05 40.5 10.1 83 329-411 27-149 (158)
454 2h30_A Thioredoxin, peptide me 94.0 0.2 6.8E-06 42.1 8.5 44 368-411 109-153 (164)
455 3gha_A Disulfide bond formatio 93.8 0.15 5.3E-06 45.3 7.6 40 217-256 29-72 (202)
456 3ewl_A Uncharacterized conserv 93.7 0.26 8.8E-06 40.3 8.4 80 329-411 26-138 (142)
457 2axo_A Hypothetical protein AT 93.4 0.031 1.1E-06 52.1 2.3 78 219-307 44-140 (270)
458 3u5r_E Uncharacterized protein 93.3 0.58 2E-05 41.8 10.7 63 332-394 61-157 (218)
459 2lrt_A Uncharacterized protein 93.2 0.54 1.8E-05 39.2 9.7 73 330-402 35-136 (152)
460 2ct6_A SH3 domain-binding glut 92.9 0.095 3.3E-06 41.9 4.3 57 220-278 9-78 (111)
461 1t1v_A SH3BGRL3, SH3 domain-bi 92.8 0.1 3.5E-06 40.0 4.2 50 221-278 4-66 (93)
462 2hyx_A Protein DIPZ; thioredox 92.7 0.72 2.5E-05 44.8 11.1 83 330-412 82-197 (352)
463 3l9s_A Thiol:disulfide interch 92.7 0.029 1E-06 49.6 0.9 40 218-257 22-65 (191)
464 1aba_A Glutaredoxin; electron 92.3 0.12 4E-06 39.0 3.9 50 221-278 2-70 (87)
465 3zyw_A Glutaredoxin-3; metal b 92.2 0.075 2.6E-06 42.6 2.7 56 213-278 12-77 (111)
466 2ggt_A SCO1 protein homolog, m 92.1 1.1 3.8E-05 37.3 10.3 82 330-411 23-158 (164)
467 1z6n_A Hypothetical protein PA 91.7 0.25 8.4E-06 42.6 5.7 62 329-392 53-122 (167)
468 3drn_A Peroxiredoxin, bacterio 91.7 1.8 6.2E-05 36.2 11.2 66 333-398 32-129 (161)
469 2rli_A SCO2 protein homolog, m 91.6 1.7 5.8E-05 36.5 11.0 83 330-412 26-162 (171)
470 3ipz_A Monothiol glutaredoxin- 91.2 0.11 3.8E-06 41.3 2.7 56 213-278 14-79 (109)
471 4f82_A Thioredoxin reductase; 91.2 0.17 5.6E-06 44.2 4.0 53 217-269 48-107 (176)
472 3eur_A Uncharacterized protein 90.9 0.68 2.3E-05 37.8 7.6 78 330-409 31-140 (142)
473 2wem_A Glutaredoxin-related pr 90.7 0.14 4.9E-06 41.4 3.0 50 221-278 22-82 (118)
474 1nm3_A Protein HI0572; hybrid, 90.5 0.14 4.8E-06 46.6 3.1 52 219-278 170-225 (241)
475 1ttz_A Conserved hypothetical 90.4 0.83 2.8E-05 34.5 7.0 45 360-410 29-73 (87)
476 4eo3_A Bacterioferritin comigr 89.7 0.31 1.1E-05 46.8 5.0 83 217-308 24-137 (322)
477 1jfu_A Thiol:disulfide interch 89.7 3.1 0.00011 35.5 11.1 84 329-412 59-178 (186)
478 4fo5_A Thioredoxin-like protei 89.0 0.74 2.5E-05 37.6 6.2 65 329-393 31-126 (143)
479 3tue_A Tryparedoxin peroxidase 88.9 0.46 1.6E-05 42.8 5.1 43 217-259 56-101 (219)
480 2lus_A Thioredoxion; CR-Trp16, 88.3 0.084 2.9E-06 43.3 0.0 25 370-394 98-122 (143)
481 3c7m_A Thiol:disulfide interch 88.2 0.23 8E-06 43.2 2.6 40 218-257 18-59 (195)
482 3gx8_A Monothiol glutaredoxin- 88.0 0.52 1.8E-05 38.1 4.5 44 227-278 29-80 (121)
483 2k8s_A Thioredoxin; dimer, str 88.0 0.31 1.1E-05 35.8 2.9 35 350-386 25-61 (80)
484 1xiy_A Peroxiredoxin, pfaop; a 87.6 0.53 1.8E-05 41.1 4.6 54 218-271 44-106 (182)
485 1wjk_A C330018D20RIK protein; 87.6 2.9 0.0001 32.1 8.5 77 328-409 13-91 (100)
486 3kp9_A Vkorc1/thioredoxin doma 87.5 0.73 2.5E-05 43.4 5.7 65 334-407 201-273 (291)
487 1we0_A Alkyl hydroperoxide red 85.9 3 0.0001 35.8 8.5 84 330-413 31-156 (187)
488 2ls5_A Uncharacterized protein 85.9 0.15 5.3E-06 42.7 0.0 43 369-411 101-145 (159)
489 2bmx_A Alkyl hydroperoxidase C 85.6 3 0.0001 36.2 8.4 84 330-413 45-169 (195)
490 1u6t_A SH3 domain-binding glut 85.5 0.88 3E-05 36.9 4.4 57 220-278 1-70 (121)
491 2xhf_A Peroxiredoxin 5; oxidor 85.1 1.4 4.8E-05 38.0 5.9 52 218-269 43-101 (171)
492 1zof_A Alkyl hydroperoxide-red 83.7 2.9 9.8E-05 36.3 7.5 85 329-413 32-160 (198)
493 2e7p_A Glutaredoxin; thioredox 82.8 1.4 4.9E-05 34.4 4.6 16 370-385 63-78 (116)
494 2k6v_A Putative cytochrome C o 82.0 4 0.00014 34.0 7.6 30 379-409 136-168 (172)
495 2vup_A Glutathione peroxidase- 82.0 12 0.00041 32.0 10.9 38 329-366 47-90 (190)
496 2jsy_A Probable thiol peroxida 81.9 12 0.00042 30.9 10.7 65 329-394 43-141 (167)
497 2pzi_A Probable serine/threoni 80.9 1.9 6.6E-05 45.5 6.1 48 27-81 626-675 (681)
498 3gyk_A 27KDA outer membrane pr 79.4 7.4 0.00025 32.7 8.4 38 370-412 134-171 (175)
499 1ego_A Glutaredoxin; electron 79.3 4.3 0.00015 29.5 6.0 51 334-385 3-63 (85)
500 3ktb_A Arsenical resistance op 78.6 6.1 0.00021 31.0 6.7 66 232-306 21-102 (106)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=1.6e-40 Score=363.78 Aligned_cols=299 Identities=28% Similarity=0.478 Sum_probs=192.2
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCCCCCCCCCC
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDA 105 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~ 105 (445)
....|||+||||+++|+.+|||+|||++++++|||+++ .+.+.++|++|++||++|+||.+|+.||++|+.......
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~-- 95 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ-- 95 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-----------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC--
Confidence 45689999999999999999999999999999999996 567889999999999999999999999999876322110
Q ss_pred CCCCCCCCCcccccCCCCCCCCCCCCCcccccCCCCCCCceecccCCCCCCCCCCCCCcchhhcccCCCCCCCCccCCCC
Q 013319 106 GHPGNQGGYTYFTSGGPGQSQFTSRPGEWQNMGGQGSSRSFSFSFGGTGGSSSFGFGLDDIFSDFFGSSFGGGRQFGGFS 185 (445)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 185 (445)
.+.+. .|. + |...||
T Consensus 96 --~~~~~--------------------~~~-------------------------~-----~~~~fg------------- 110 (780)
T 3apo_A 96 --GGQYE--------------------SWS-------------------------Y-----YRYDFG------------- 110 (780)
T ss_dssp -------------------------------------------------------C-----CSSSSS-------------
T ss_pred --CCCcc--------------------ccc-------------------------c-----cchhhc-------------
Confidence 00000 010 0 001110
Q ss_pred CCCCCCCCCCCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHh
Q 013319 186 GSTGSQSQSRSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCK 264 (445)
Q Consensus 186 ~~~~~~~~~~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~ 264 (445)
.|..++.|.+||.++|++.+ +++.+|||.||||||++|+. .|.|+++|+++.+.+.+++|||++++.+|+
T Consensus 111 --------~~~~~~~v~~l~~~~f~~~i-~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~ 181 (780)
T 3apo_A 111 --------IYDDDPEIITLERREFDAAV-NSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCR 181 (780)
T ss_dssp --------TTTTCTTEEECCHHHHHHHH-TSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC-
T ss_pred --------ccCCCcceeeechHhHHhhh-cCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHH
Confidence 12234569999999998876 67789999999999999999 999999999999889999999999999999
Q ss_pred HhCCccCCCcEEEEeccCCCCCCC-eeeecCcccHHHHHHHHHhhCCCCceecccccc-chhhh-ccCCCCEEEEEecCC
Q 013319 265 ELGVHRPRSPRIFAYSYKAGDKGS-LVEYNEHLVAKNLKSFCRDHLPRFSKRISLNRI-EFTFD-AKARLPSVLLLSTKK 341 (445)
Q Consensus 265 ~~~I~~~~~Pti~~f~~~~~~~g~-~~~y~g~~~~~~l~~fi~~~lp~~~~~i~~~~~-~~~~~-~~~~~~~vvlF~~~~ 341 (445)
+++|.++ |||++| .+|. +..|.|.++.+.|++|+.+.+++.+..++..+. +.+.. ...+.++||+|+++.
T Consensus 182 ~~~v~~~--Pt~~~~-----~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~ 254 (780)
T 3apo_A 182 MKGVNSY--PSLFIF-----RSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKG 254 (780)
T ss_dssp ---------CEEEEE-----CTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTT
T ss_pred HcCCcee--eeEEEE-----eCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCc
Confidence 9999999 999999 3444 578999999999999999999987766654421 11111 123667888888765
Q ss_pred C---ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCC-------cccccccccChhhHHHHHH
Q 013319 342 E---TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNG-------EKDVLKTGISVKDQKSSIH 410 (445)
Q Consensus 342 ~---~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~-------~~~~~~~~~~~~~~~~~~~ 410 (445)
. .+..++++|..|++.+.|+.+... .+..++++++|++.| +++|.... ...+|.+..+..++..++.
T Consensus 255 ~~~~~~~~~~~l~~~f~~~~~f~~v~c~-~~~~l~~~~gi~~~p-~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~ 331 (780)
T 3apo_A 255 EDCLTSQTRLRLSGMLDGLVNVGWVDCD-AQDSLCKSLDTTAST-TAYFPPGATLNDREKSSVLFLNSLDAKEIYMEII 331 (780)
T ss_dssp SCCCCHHHHHHHHHHTTTTEEEEEEETT-TSHHHHTCC-----C-EEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhccceEEEEEcC-CCHHHHHHhCCCCCc-eeeeccccccCCCcccceeccccccHHHHHHHHH
Confidence 4 578999999999999998665422 567899999999988 55455421 2346777777777766655
No 2
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=100.00 E-value=4.8e-37 Score=283.63 Aligned_cols=203 Identities=34% Similarity=0.649 Sum_probs=165.7
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCCCCCCCCCCCCC
Q 013319 30 VDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKNYDLYGDEKGSPGFDAGHP 108 (445)
Q Consensus 30 ~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~~ 108 (445)
.|||+||||+++|+.++||+|||++++++|||+++ .+.+.++|++|++||++|+||.+|+.||.+|+.......
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~----- 76 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ----- 76 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC-----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc-----
Confidence 68999999999999999999999999999999996 577899999999999999999999999999876322110
Q ss_pred CCCCCCcccccCCCCCCCCCCCCCcccccCCCCCCCceecccCCCCCCCCCCCCCcchhhcccCCCCCCCCccCCCCCCC
Q 013319 109 GNQGGYTYFTSGGPGQSQFTSRPGEWQNMGGQGSSRSFSFSFGGTGGSSSFGFGLDDIFSDFFGSSFGGGRQFGGFSGST 188 (445)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 188 (445)
+ +.+ ..| ..|...||
T Consensus 77 ~---------------~~~----~~~------------------------------~~~~~~fg---------------- 91 (210)
T 3apq_A 77 G---------------GQY----ESW------------------------------SYYRYDFG---------------- 91 (210)
T ss_dssp S---------------CCC----CCH------------------------------HHHHHSSS----------------
T ss_pred c---------------ccc----ccc------------------------------cccccccc----------------
Confidence 0 000 001 01111110
Q ss_pred CCCCCCCCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhC
Q 013319 189 GSQSQSRSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELG 267 (445)
Q Consensus 189 ~~~~~~~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~ 267 (445)
.+..+..|.+|+.++|+..+ .+++++||.||++||++|+. .|.|+++++++.+.+.|+.|||++++.+|++++
T Consensus 92 -----~~~~~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~ 165 (210)
T 3apq_A 92 -----IYDDDPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKG 165 (210)
T ss_dssp -----TTTTCTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTT
T ss_pred -----ccCCCCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcC
Confidence 12234558999999998876 56678999999999999999 999999999998889999999999999999999
Q ss_pred CccCCCcEEEEeccCCCCCCC-eeeecCcccHHHHHHHHHhhCCCCcee
Q 013319 268 VHRPRSPRIFAYSYKAGDKGS-LVEYNEHLVAKNLKSFCRDHLPRFSKR 315 (445)
Q Consensus 268 I~~~~~Pti~~f~~~~~~~g~-~~~y~g~~~~~~l~~fi~~~lp~~~~~ 315 (445)
|.++ ||+++|+ +|. +..+.|.++.++|.+||.+.+++.+..
T Consensus 166 v~~~--Pt~~~~~-----~G~~~~~~~G~~~~~~l~~~i~~~l~~~~~~ 207 (210)
T 3apq_A 166 VNSY--PSLFIFR-----SGMAAVKYNGDRSKESLVAFAMQHVRSTVTE 207 (210)
T ss_dssp CCSS--SEEEEEC-----TTSCCEECCSCCCHHHHHHHHHHHHHCCSSC
T ss_pred CCcC--CeEEEEE-----CCCceeEecCCCCHHHHHHHHHHhCccccee
Confidence 9999 9999993 343 567999999999999999988765443
No 3
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.6e-28 Score=234.63 Aligned_cols=223 Identities=15% Similarity=0.241 Sum_probs=176.7
Q ss_pred CCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc--cchhhHhHhCCccCCC
Q 013319 197 SSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE--TEASLCKELGVHRPRS 273 (445)
Q Consensus 197 ~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~--~~~~lc~~~~I~~~~~ 273 (445)
....|++||.++|++.+.+.+.++||.||||||++|+. .|.|+++++++.+.+.++.|||+ ++..+|++|+|.++
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~-- 92 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF-- 92 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS--
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc--
Confidence 45669999999999888777789999999999999999 99999999999988999999998 67899999999999
Q ss_pred cEEEEeccCCCC-------------CCCeeeecCcccHHHHHHHHHhhCCCCceeccc-cccchhhhccCCCCEEEEEec
Q 013319 274 PRIFAYSYKAGD-------------KGSLVEYNEHLVAKNLKSFCRDHLPRFSKRISL-NRIEFTFDAKARLPSVLLLST 339 (445)
Q Consensus 274 Pti~~f~~~~~~-------------~g~~~~y~g~~~~~~l~~fi~~~lp~~~~~i~~-~~~~~~~~~~~~~~~vvlF~~ 339 (445)
||+++|..+... ...+..|.|.++.+.|++|+.+.+++.+..++. ++++.+... ...++|++|+.
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~-~~~~~vi~fs~ 171 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRK-SPKLSVVLFSK 171 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTS-CSSEEEEEEES
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhc-CCceEEEEEcC
Confidence 999999544210 113678999999999999999999887776643 444434333 25788999988
Q ss_pred CCCChHHHHHHHHHhhccceEEEEeecCCChHHH-----HHcC-----C-------------CCCCeEEEEcc-CCcccc
Q 013319 340 KKETPIIWRVLSGMYHERLNFYDTEVHDVSDPAV-----KKLG-----V-------------DALPAIVGWLS-NGEKDV 395 (445)
Q Consensus 340 ~~~~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~-----~~f~-----V-------------~~~Ptlv~~~~-~~~~~~ 395 (445)
+...++.|+++|..|++++.|+.+. +.+++ ++|+ | ..+|+|++|.. +++..+
T Consensus 172 ~~~~~~~f~~~A~~~~~~~~F~~v~----~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~ 247 (298)
T 3ed3_A 172 QDKISPVYKSIALDWLGKFDFYSIS----NKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWE 247 (298)
T ss_dssp SSSCCHHHHHHHHHTBTTEEEEEEE----GGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEE
T ss_pred CCcchHHHHHHHHHhhcCcEEEEEc----chHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEE
Confidence 8888999999999999999997764 23333 2232 2 67999999987 566778
Q ss_pred cccc-cChhhHHHHHHHHHhhhhhhhh--cccccccCCCccchhc
Q 013319 396 LKTG-ISVKDQKSSIHELSKLLDGLKK--RTKRQLPHGLANHIVI 437 (445)
Q Consensus 396 ~~~~-~~~~~~~~~~~~~~~~l~~~~~--~n~~~~~~~l~~~~~~ 437 (445)
|.++ .+.++| .+||. .|+.++.++|+.+..|
T Consensus 248 y~g~~~~~~~i-----------~~fi~~~~~~~p~~~~ls~~~~~ 281 (298)
T 3ed3_A 248 YEGNSINKNDI-----------SKFLRDTFSITPNEGPFSRRSEY 281 (298)
T ss_dssp CCCSSCCHHHH-----------HHHHHHHHTCCCSSSTTSHHHHH
T ss_pred eccccCCHHHH-----------HHHHHhhcCCCCCcCCCchHHHH
Confidence 8753 455444 44554 5677888999987766
No 4
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.95 E-value=1.1e-27 Score=239.45 Aligned_cols=219 Identities=16% Similarity=0.241 Sum_probs=174.5
Q ss_pred CCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-h------hHHHHHHHHhcC-ccEEEEEeCccchhhHhHh
Q 013319 195 RSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-E------SVIEEVANSMEG-ALKVGSINCETEASLCKEL 266 (445)
Q Consensus 195 ~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~------p~~~~~a~~l~~-~v~~~~Vdc~~~~~lc~~~ 266 (445)
|...+.|.+||.++|++.| +++.+|||.||||||+||+. . |+|+++|+.+++ .+.+++|||++++.+|++|
T Consensus 9 ~~~~~~v~~lt~~~f~~~i-~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~ 87 (367)
T 3us3_A 9 YDGVDRVINVNAKNYKNVF-KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKL 87 (367)
T ss_dssp CCCCCCCEECCTTTHHHHH-HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHH
T ss_pred CCCCCccEECCHHHHHHHH-hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHc
Confidence 4456779999999998866 55679999999999999754 3 699999999987 5999999999999999999
Q ss_pred CCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCCCCceeccc-cccchhhhccCCCCEEEEEecCCC--C
Q 013319 267 GVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPRFSKRISL-NRIEFTFDAKARLPSVLLLSTKKE--T 343 (445)
Q Consensus 267 ~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~~~~~i~~-~~~~~~~~~~~~~~~vvlF~~~~~--~ 343 (445)
+|+++ |||++| .+|+++.|.|.++.+.|++|+.+.+.+.+..++. .+++.+... ...+++|.|..... .
T Consensus 88 ~V~~~--PTl~~f-----~~G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~-~~~~~vv~ff~~~~~~~ 159 (367)
T 3us3_A 88 GLTEE--DSIYVF-----KEDEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENI-EDEIKLIGYFKNKDSEH 159 (367)
T ss_dssp TCCST--TEEEEE-----ETTEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHC-CSSCEEEEECSCTTCHH
T ss_pred CCCcC--ceEEEE-----ECCcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhcc-CCCcEEEEEECCCCchH
Confidence 99999 999999 4567789999999999999999998877666643 444433331 23456666654432 3
Q ss_pred hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEcc-CCcccccccc-cChhhHHHHHHHHHhhhhhhhh
Q 013319 344 PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLS-NGEKDVLKTG-ISVKDQKSSIHELSKLLDGLKK 421 (445)
Q Consensus 344 ~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~ 421 (445)
...|.++|..+++.+.|+.+ .++.++++|+|+. |+|++|++ ++....|.++ .+.++ |..|++
T Consensus 160 ~~~f~~~A~~~~~~~~F~~~----~~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~~~-----------l~~fi~ 223 (367)
T 3us3_A 160 YKAFKEAAEEFHPYIPFFAT----FDSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSEEE-----------IVNFVE 223 (367)
T ss_dssp HHHHHHHHHHHTTTSCEEEE----CCHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCHHH-----------HHHHHH
T ss_pred HHHHHHHHHhhcCCcEEEEE----CCHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCHHH-----------HHHHHH
Confidence 67899999999999999765 5688999999995 99999988 3456677764 56644 456666
Q ss_pred cccccccCCCccchhcc
Q 013319 422 RTKRQLPHGLANHIVIQ 438 (445)
Q Consensus 422 ~n~~~~~~~l~~~~~~~ 438 (445)
.+..++++.|+.+++.+
T Consensus 224 ~~~~p~v~elt~~~~~~ 240 (367)
T 3us3_A 224 EHRRSTLRKLKPESMYE 240 (367)
T ss_dssp HTCSCSEEECCGGGHHH
T ss_pred HcCccceeecChhhHHH
Confidence 78888888888887654
No 5
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.95 E-value=5.2e-27 Score=233.09 Aligned_cols=219 Identities=15% Similarity=0.190 Sum_probs=172.7
Q ss_pred CCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhH-------HHHHHHHhcC-ccEEEEEeCccchhhHhH
Q 013319 195 RSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESV-------IEEVANSMEG-ALKVGSINCETEASLCKE 265 (445)
Q Consensus 195 ~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~-------~~~~a~~l~~-~v~~~~Vdc~~~~~lc~~ 265 (445)
++.++.|.+||.++|++.+ .++++|||.||||||+ |+. +|. |+++|+.+++ .+.+++|||++++.+|++
T Consensus 7 ~~~~~~v~~l~~~~f~~~i-~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~ 84 (350)
T 1sji_A 7 YDGKDRVVSLTEKNFKQVL-KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKK 84 (350)
T ss_dssp CCCCCCCEEECHHHHHHHH-TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHH
T ss_pred CCCCCccEECCHHHHHHHH-hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHh
Confidence 3445679999999998755 5677999999999999 888 999 9999999987 599999999999999999
Q ss_pred hCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCCCCceeccc-cccchhhhccCCCCEEEEEecCCC--
Q 013319 266 LGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPRFSKRISL-NRIEFTFDAKARLPSVLLLSTKKE-- 342 (445)
Q Consensus 266 ~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~~~~~i~~-~~~~~~~~~~~~~~~vvlF~~~~~-- 342 (445)
++|+++ ||+++| .+|.+..|.|.++.+.|++|+.+.+++.+..++. ++++.+... ...+++|.|.....
T Consensus 85 ~~v~~~--Pt~~~~-----~~g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~-~~~~~vv~ff~~~~~~ 156 (350)
T 1sji_A 85 LGFDEE--GSLYVL-----KGDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERI-EDQIKLIGFFKSEESE 156 (350)
T ss_dssp HTCCST--TEEEEE-----ETTEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHC-CSSCEEEEECSCTTSH
T ss_pred cCCCcc--ceEEEE-----ECCcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhcc-CCCcEEEEEECCCCcH
Confidence 999999 999999 3456788999999999999999999877666643 334433321 23356666655433
Q ss_pred ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEcc-CCcccccccc-cChhhHHHHHHHHHhhhhhhh
Q 013319 343 TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLS-NGEKDVLKTG-ISVKDQKSSIHELSKLLDGLK 420 (445)
Q Consensus 343 ~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 420 (445)
....|.++|..+++.+.|+.+ .+++++++++|+ +|+|++|++ ++....|.++ .+.++|. .|+
T Consensus 157 ~~~~~~~~A~~~~~~~~f~~~----~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~-----------~fi 220 (350)
T 1sji_A 157 YYKAFEEAAEHFQPYIKFFAT----FDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELV-----------EFV 220 (350)
T ss_dssp HHHHHHHHHHHTTTTSEEEEE----CCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHH-----------HHH
T ss_pred HHHHHHHHHHhhccCcEEEEE----CCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHH-----------HHH
Confidence 357899999999999999765 568899999999 999999988 4556678776 6665554 444
Q ss_pred hcccccccCCCccchhccc
Q 013319 421 KRTKRQLPHGLANHIVIQR 439 (445)
Q Consensus 421 ~~n~~~~~~~l~~~~~~~~ 439 (445)
+.+..++++.|+.+++.+.
T Consensus 221 ~~~~~p~v~elt~~~~~~~ 239 (350)
T 1sji_A 221 KEHQRPTLRRLRPEDMFET 239 (350)
T ss_dssp HHHCCCSEEECCTTTHHHH
T ss_pred HHcCccchhhcChhhHHHH
Confidence 4566777777777776543
No 6
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.94 E-value=1.2e-26 Score=218.84 Aligned_cols=205 Identities=15% Similarity=0.222 Sum_probs=160.5
Q ss_pred CCCCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC---ccEEEEEeC--ccchhhHhHh
Q 013319 193 QSRSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG---ALKVGSINC--ETEASLCKEL 266 (445)
Q Consensus 193 ~~~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~---~v~~~~Vdc--~~~~~lc~~~ 266 (445)
+.|+.++.|.+|+.++|++.+.+++++|+|.|||+||++|+. .|.|+++++++.+ .+.|++||| +++..+|++|
T Consensus 6 ~l~~~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~ 85 (244)
T 3q6o_A 6 ALYSPSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDF 85 (244)
T ss_dssp CCSCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHT
T ss_pred CCCCCCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHc
Confidence 457778889999999999988888899999999999999999 9999999999987 899999999 6689999999
Q ss_pred CCccCCCcEEEEeccCCCC-CCCeeeecCcccHHHHHHHHHhhCCCCc----------eeccccccchhhhccCCCCEEE
Q 013319 267 GVHRPRSPRIFAYSYKAGD-KGSLVEYNEHLVAKNLKSFCRDHLPRFS----------KRISLNRIEFTFDAKARLPSVL 335 (445)
Q Consensus 267 ~I~~~~~Pti~~f~~~~~~-~g~~~~y~g~~~~~~l~~fi~~~lp~~~----------~~i~~~~~~~~~~~~~~~~~vv 335 (445)
+|.++ ||+++|..+... .|..+.+.| ++.+.|.+++.+.++... ..++..++..+...+...+.++
T Consensus 86 ~v~~~--Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al 162 (244)
T 3q6o_A 86 NIPGF--PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLAL 162 (244)
T ss_dssp TCCSS--SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEE
T ss_pred CCCcc--CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEE
Confidence 99999 999999654322 244555666 689999999987765432 2333344444444566778889
Q ss_pred EEecCCCChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 336 LLSTKKETPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 336 lF~~~~~~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
+|+++.. .....++..+...-.+....+.+.+..++++|+|+++|+++++.+|++...++.....
T Consensus 163 ~f~~~~~--~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~~~~~~ 227 (244)
T 3q6o_A 163 IFEXGGS--YLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSVSRVPVLMES 227 (244)
T ss_dssp EEECTTC--CHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSSS
T ss_pred EEEECCc--chHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCCCeEeecccccc
Confidence 9988653 4556666666643223224455567999999999999999999999998888766555
No 7
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.94 E-value=9.5e-26 Score=211.40 Aligned_cols=206 Identities=14% Similarity=0.125 Sum_probs=163.7
Q ss_pred CCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCc---cEEEEEeCccchhhHhHhCCcc
Q 013319 195 RSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGA---LKVGSINCETEASLCKELGVHR 270 (445)
Q Consensus 195 ~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~---v~~~~Vdc~~~~~lc~~~~I~~ 270 (445)
+..++.|.+|+.++|+..+ .++++++|.|||+||++|+. .|.|+++++++++. +.++.|||+++..+|++|+|++
T Consensus 11 ~~~~~~v~~l~~~~~~~~~-~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~ 89 (241)
T 3idv_A 11 VKEENGVLVLNDANFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSG 89 (241)
T ss_dssp CEEETTEEEECTTTHHHHH-TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS
T ss_pred cccCCCcEEecccCHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCc
Confidence 4446779999999998754 66779999999999999999 99999999999875 9999999999999999999999
Q ss_pred CCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCCCC-------ceeccccccchhhhccCCCCEEEEEecCCC-
Q 013319 271 PRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPRF-------SKRISLNRIEFTFDAKARLPSVLLLSTKKE- 342 (445)
Q Consensus 271 ~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~~-------~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~- 342 (445)
+ ||+++| .+|..+.|.|.++.++|.+|+.+.+.+. +..++.++++... ....+++|.|+....
T Consensus 90 ~--Pt~~~~-----~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~f~a~wC~ 160 (241)
T 3idv_A 90 Y--PTIKIL-----KKGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVV--NDADIILVEFYAPWCG 160 (241)
T ss_dssp S--SEEEEE-----ETTEEEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHH--HHCSEEEEEEECTTCT
T ss_pred C--CEEEEE-----cCCCcccccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhh--ccCCeEEEEEECCCCH
Confidence 9 999999 3566778999999999999999765432 3333444333222 344578888876532
Q ss_pred ----ChHHHHHHHHHhhcc---ceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhhHHHHHHHH
Q 013319 343 ----TPIIWRVLSGMYHER---LNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 343 ----~~~~~~~lA~~~~~~---~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (445)
..+.|..+|..+.++ +.|+.+++. .+++++++|+|+++||+++|..++. ..|.+..+.++|..++...
T Consensus 161 ~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~g~~-~~~~g~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 161 HCKKLAPEYEKAAKELSKRSPPIPLAKVDAT-AETDLAKRFDVSGYPTLKIFRKGRP-YDYNGPREKYGIVDYMIEQ 235 (241)
T ss_dssp GGGGTHHHHHHHHHHHHTSSSCCCEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEE-EECCSCCSHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHhccCCcEEEEEEECC-CCHHHHHHcCCcccCEEEEEECCeE-EEecCCCCHHHHHHHHHhh
Confidence 367899999999765 777665444 6789999999999999998875444 4488888888887776654
No 8
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.93 E-value=2.5e-25 Score=230.12 Aligned_cols=214 Identities=12% Similarity=0.182 Sum_probs=168.3
Q ss_pred cccccChhhHHHHhhcCC---cEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcE
Q 013319 200 NIRALNLQVFKKEIVEKG---MTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPR 275 (445)
Q Consensus 200 ~V~~Lt~~~f~~~v~~~~---~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pt 275 (445)
.|.+||.++|++.+ ... .+|||.||||||++|+. .|.|+++|+.+++.+.+++|||++++.+|++++|+++ ||
T Consensus 2 ~v~~l~~~~f~~~i-~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~--Pt 78 (481)
T 3f8u_A 2 DVLELTDDNFESRI-SDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGY--PT 78 (481)
T ss_dssp CCEEECTTTHHHHT-TCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEE--SE
T ss_pred ceEEecHHHHHHHH-HhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCC--CE
Confidence 58999999998877 444 79999999999999999 9999999999998899999999999999999999999 99
Q ss_pred EEEeccCCCCCC-CeeeecCcccHHHHHHHHHhhCCCCceeccc-cccchhhhccCCCCEEE-EEecC-CCChHHHHHHH
Q 013319 276 IFAYSYKAGDKG-SLVEYNEHLVAKNLKSFCRDHLPRFSKRISL-NRIEFTFDAKARLPSVL-LLSTK-KETPIIWRVLS 351 (445)
Q Consensus 276 i~~f~~~~~~~g-~~~~y~g~~~~~~l~~fi~~~lp~~~~~i~~-~~~~~~~~~~~~~~~vv-lF~~~-~~~~~~~~~lA 351 (445)
|++| .+| .+..|.|.++.+.|++|+.+.+++.+..++. ++++.+.. .+.+++| +|.+. ......|..+|
T Consensus 79 l~~~-----~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~vv~~~~~~~~~~~~~f~~~a 151 (481)
T 3f8u_A 79 LKIF-----RDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFIS--DKDASIVGFFDDSFSEAHSEFLKAA 151 (481)
T ss_dssp EEEE-----ETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTT--SSSCEEEEEESCTTCHHHHHHHHHH
T ss_pred EEEE-----eCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHh--cCCcEEEEEECCCccchHHHHHHHH
Confidence 9999 345 4678999999999999999999876665533 33332222 3445566 44333 33578999999
Q ss_pred HHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEc------c-CCcccccc-cccChhhHHHHHHHHHhhhhhhhhcc
Q 013319 352 GMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWL------S-NGEKDVLK-TGISVKDQKSSIHELSKLLDGLKKRT 423 (445)
Q Consensus 352 ~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~------~-~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~n 423 (445)
..+++++.|+.+ .+.+++++|+|+..| |++|+ . ++....|. +..+.++ |..|++.+
T Consensus 152 ~~~~~~~~F~~~----~~~~~~~~~~v~~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~-----------l~~fi~~~ 215 (481)
T 3f8u_A 152 SNLRDNYRFAHT----NVESLVNEYDDNGEG-IILFRPSHLTNKFEDKTVAYTEQKMTSGK-----------IKKFIQEN 215 (481)
T ss_dssp HHHTTTSCEEEE----CCHHHHHHHCSSSEE-EEEECCGGGCBTTBCSEEECCCSSCCHHH-----------HHHHHHHH
T ss_pred HHhccCceEEEE----CCHHHHHHhCCCCCc-EEEEecccccCccCCcccccCCCCCCHHH-----------HHHHHHHh
Confidence 999999999765 578999999999755 77787 2 34455776 4455544 45566677
Q ss_pred cccccCCCccchhccc
Q 013319 424 KRQLPHGLANHIVIQR 439 (445)
Q Consensus 424 ~~~~~~~l~~~~~~~~ 439 (445)
...+++.++.++..+.
T Consensus 216 ~~p~v~e~t~~n~~~~ 231 (481)
T 3f8u_A 216 IFGICPHMTEDNKDLI 231 (481)
T ss_dssp TTTTSCEECTTTHHHH
T ss_pred CCCCccccChhHHHHh
Confidence 7788888887776543
No 9
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.93 E-value=1.8e-25 Score=224.57 Aligned_cols=212 Identities=11% Similarity=0.190 Sum_probs=148.9
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhc------CccEEEEEeCccchhhHhHhCCcc
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSME------GALKVGSINCETEASLCKELGVHR 270 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~------~~v~~~~Vdc~~~~~lc~~~~I~~ 270 (445)
.+.|.+|+.++|++.+ .++++|||.||||||+||+. +|+|+++|+.++ +.+.+++|||+++..+|++++|++
T Consensus 4 ~~~v~~l~~~~f~~~~-~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~ 82 (382)
T 2r2j_A 4 GSEITSLDTENIDEIL-NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK 82 (382)
T ss_dssp ----CBCCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE
T ss_pred CCceEECCHHHHHHHH-hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc
Confidence 3458999999998754 56779999999999999999 999999999993 469999999999999999999999
Q ss_pred CCCcEEEEeccCCCCCCCee--eecCcccHHHHHHHHHhhCCCCceeccc-cccchhhhccCCCCEEEEEecCCCCh--H
Q 013319 271 PRSPRIFAYSYKAGDKGSLV--EYNEHLVAKNLKSFCRDHLPRFSKRISL-NRIEFTFDAKARLPSVLLLSTKKETP--I 345 (445)
Q Consensus 271 ~~~Pti~~f~~~~~~~g~~~--~y~g~~~~~~l~~fi~~~lp~~~~~i~~-~~~~~~~~~~~~~~~vvlF~~~~~~~--~ 345 (445)
+ ||+++| .+|..+ .|.|.++.+.|++|+.+.+.+.+..++. ++++. .....+++|.|......+ .
T Consensus 83 ~--Pt~~~f-----~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~---l~~~~~~~v~ff~~~~~~~~~ 152 (382)
T 2r2j_A 83 Y--PTLKLF-----RNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT---LDRSKRNIIGYFEQKDSDNYR 152 (382)
T ss_dssp E--SEEEEE-----ETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC---------------CCEEEEEESCSSSHHHH
T ss_pred C--CEEEEE-----eCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH---hcCCCCEEEEEECCCCChhHH
Confidence 9 999999 355544 5999999999999999988876655543 33432 234456666666554444 4
Q ss_pred HHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccC---Cccccccccc-ChhhHHHHHHHHHhhhhhhhh
Q 013319 346 IWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSN---GEKDVLKTGI-SVKDQKSSIHELSKLLDGLKK 421 (445)
Q Consensus 346 ~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 421 (445)
.|.++|..+++++.|+.+. + +++++++|+++| |+ |++. .....|.++. +.++|..| ++
T Consensus 153 ~f~~~A~~~~~~~~F~~~~----~-~~~~~~~v~~~p-i~-~~~~~~~~~~~~y~g~~~~~~~l~~f-----------i~ 214 (382)
T 2r2j_A 153 VFERVANILHDDCAFLSAF----G-DVSKPERYSGDN-II-YKPPGHSAPDMVYLGAMTNFDVTYNW-----------IQ 214 (382)
T ss_dssp HHHHHHHHHTTTCEEEEEE----S-CC--------CE-EE-EECSSSSSCCEECCSCTTCHHHHHHH-----------HH
T ss_pred HHHHHHHHhhccceEEEEe----h-hhHHhhCCCCCc-eE-ECCCCCCCcCcccCCCCCCHHHHHHH-----------HH
Confidence 7999999999999986653 2 478889999999 54 5553 2356788777 56555444 44
Q ss_pred cccccccCCCccchhcc
Q 013319 422 RTKRQLPHGLANHIVIQ 438 (445)
Q Consensus 422 ~n~~~~~~~l~~~~~~~ 438 (445)
.+...+++.|+.+.+.+
T Consensus 215 ~~~~p~v~elt~~~~~~ 231 (382)
T 2r2j_A 215 DKCVPLVREITFENGEE 231 (382)
T ss_dssp HHHSCSSEECCHHHHHH
T ss_pred hcccCceEecChhhHHH
Confidence 55566777777766653
No 10
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.92 E-value=2.9e-24 Score=222.88 Aligned_cols=205 Identities=18% Similarity=0.233 Sum_probs=160.7
Q ss_pred CCCCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC---ccEEEEEeCc--cchhhHhHh
Q 013319 193 QSRSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG---ALKVGSINCE--TEASLCKEL 266 (445)
Q Consensus 193 ~~~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~---~v~~~~Vdc~--~~~~lc~~~ 266 (445)
+.|+.++.|.+|+.++|+..+.++++++||.|||+||++|+. .|.|+++++++++ .+.|++|||+ ++..+|++|
T Consensus 6 ~Ly~~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~ 85 (519)
T 3t58_A 6 VLYSSSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREF 85 (519)
T ss_dssp CSCCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHT
T ss_pred ccCCCCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHc
Confidence 457778889999999999988888889999999999999999 9999999999987 7999999995 488999999
Q ss_pred CCccCCCcEEEEeccCCCCCCC-eeeecCcccHHHHHHHHHhhCCCCc----------eeccccccchhhhccCCCCEEE
Q 013319 267 GVHRPRSPRIFAYSYKAGDKGS-LVEYNEHLVAKNLKSFCRDHLPRFS----------KRISLNRIEFTFDAKARLPSVL 335 (445)
Q Consensus 267 ~I~~~~~Pti~~f~~~~~~~g~-~~~y~g~~~~~~l~~fi~~~lp~~~----------~~i~~~~~~~~~~~~~~~~~vv 335 (445)
+|.++ ||+++|..+. .+|. ...+.|.++.+.|.++|.+.++... ..++..+++.+.......++++
T Consensus 86 ~V~~~--PTl~~f~~g~-~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~val 162 (519)
T 3t58_A 86 NIAGF--PTVRFFQAFT-KNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLAL 162 (519)
T ss_dssp TCCSB--SEEEEECTTC-CSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEE
T ss_pred CCccc--CEEEEEcCcc-cCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEE
Confidence 99999 9999996543 2333 3456777899999999998776432 2334444554555567778899
Q ss_pred EEecCCCChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 336 LLSTKKETPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 336 lF~~~~~~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
+|+++.. .....++..|...-.+....+.+++.+++++|||+.+|+|+++.++++...++...+.
T Consensus 163 lF~~~~s--~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~ 227 (519)
T 3t58_A 163 VFEREDS--YLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVES 227 (519)
T ss_dssp EEECTTC--CHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCS
T ss_pred EecCCch--HHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCceeeccccccc
Confidence 9998764 3666777777644333224455567899999999999999999999877666544433
No 11
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.91 E-value=1.4e-24 Score=226.04 Aligned_cols=219 Identities=11% Similarity=0.144 Sum_probs=171.0
Q ss_pred CCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCc-cEEEEEeCccchhhHhHhCCccCC
Q 013319 195 RSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGA-LKVGSINCETEASLCKELGVHRPR 272 (445)
Q Consensus 195 ~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~-v~~~~Vdc~~~~~lc~~~~I~~~~ 272 (445)
+..++.|.+||.++|++.+ +++++|||.||||||+||+. .|.|+++|+.+++. +.+++|||++++.+|++|+|+++
T Consensus 10 ~~~~~~v~~l~~~~f~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~- 87 (504)
T 2b5e_A 10 APEDSAVVKLATDSFNEYI-QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGF- 87 (504)
T ss_dssp CCTTSSCEECCTTTHHHHH-TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSS-
T ss_pred CCCCCCcEECCHHHHHHHH-hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcC-
Confidence 5556789999999998854 66789999999999999999 99999999999984 99999999999999999999999
Q ss_pred CcEEEEeccCCCCCCC---eeeecCcccHHHHHHHHHhhCCCCceeccccccchhhhccC-CCCEEEEEec-CCCChHHH
Q 013319 273 SPRIFAYSYKAGDKGS---LVEYNEHLVAKNLKSFCRDHLPRFSKRISLNRIEFTFDAKA-RLPSVLLLST-KKETPIIW 347 (445)
Q Consensus 273 ~Pti~~f~~~~~~~g~---~~~y~g~~~~~~l~~fi~~~lp~~~~~i~~~~~~~~~~~~~-~~~~vvlF~~-~~~~~~~~ 347 (445)
||+++|. +|. +..|.|.++.+.|++|+.+.+++.+..++. ++.+..... ..+++++|.+ .......|
T Consensus 88 -Pt~~~~~-----~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~--~~~~~~~~~~~~~~v~~f~~~~~~~~~~f 159 (504)
T 2b5e_A 88 -PSLKIFK-----NSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD--LPAYLANETFVTPVIVQSGKIDADFNATF 159 (504)
T ss_dssp -SEEEEEE-----TTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC--HHHHHHHSCCSSCEEEEEESCCHHHHHHH
T ss_pred -CEEEEEe-----CCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH--HHHHHhcCCCceEEEEEeCCCCchHHHHH
Confidence 9999994 333 778999999999999999999887766655 443333222 1567777776 33468899
Q ss_pred HHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccc-c---ChhhHHHHHHHHHhhhhhhhhcc
Q 013319 348 RVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTG-I---SVKDQKSSIHELSKLLDGLKKRT 423 (445)
Q Consensus 348 ~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~l~~~~~~n 423 (445)
.++|..+++.+.|+.+. +++++++++ +++++..+....|.+. . +. ..|..|+..+
T Consensus 160 ~~~A~~~~~~~~F~~~~------~~~~~~~~~----i~l~~~~~~~~~~~g~~~~~~~~-----------~~l~~fi~~~ 218 (504)
T 2b5e_A 160 YSMANKHFNDYDFVSAE------NADDDFKLS----IYLPSAMDEPVVYNGKKADIADA-----------DVFEKWLQVE 218 (504)
T ss_dssp HHHHHHTTTTCEEEEEE------CTTSCCEEE----EEETTEEEEEEECCSCHHHHTSH-----------HHHHHHHHHH
T ss_pred HHHHHHhhcCcEEEEEH------HHHHhcCCe----EEecCCCCcccccCCcccccCCH-----------HHHHHHHHhc
Confidence 99999999999997653 467778875 6666653355566554 2 33 3456667778
Q ss_pred cccccCCCccchhcccccccc
Q 013319 424 KRQLPHGLANHIVIQRRSRYL 444 (445)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~ 444 (445)
..++++.++.+++.+...+.+
T Consensus 219 ~~p~v~~~t~~~~~~~~~~~~ 239 (504)
T 2b5e_A 219 ALPYFGEIDGSVFAQYVESGL 239 (504)
T ss_dssp SSCSSCBCCHHHHHHHHHTTS
T ss_pred ccCCcccCCHhHHHHHhcCCC
Confidence 888899998877665444333
No 12
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.89 E-value=2.4e-22 Score=219.76 Aligned_cols=211 Identities=19% Similarity=0.271 Sum_probs=166.7
Q ss_pred CcccccChhhHHHHhhcC--CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcE
Q 013319 199 GNIRALNLQVFKKEIVEK--GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPR 275 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~--~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pt 275 (445)
+.|..|+.++|++.+.+. +.+|+|.||+|||+||+. .|.|+++|+.+++.+.|++|||+.+..+|++++|+++ ||
T Consensus 543 ~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~~~~l~~~~~v~~~--Pt 620 (780)
T 3apo_A 543 PSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQRY--PE 620 (780)
T ss_dssp CSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTTHHHHHHTTCCSS--SE
T ss_pred cceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcchHHHHHHcCCCCC--Ce
Confidence 568999999999887663 458999999999999999 9999999999999999999999999999999999999 99
Q ss_pred EEEeccCCCCCCCeeeecC-cccHHHHHHHHHhhCCCCceeccccccchhhhccCCCCEEEEEecCCCC-----hHHHHH
Q 013319 276 IFAYSYKAGDKGSLVEYNE-HLVAKNLKSFCRDHLPRFSKRISLNRIEFTFDAKARLPSVLLLSTKKET-----PIIWRV 349 (445)
Q Consensus 276 i~~f~~~~~~~g~~~~y~g-~~~~~~l~~fi~~~lp~~~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~~-----~~~~~~ 349 (445)
|++|+.+......++.|.| .++.++|.+|+.+.+++.+..++.+++... .....++++|.|+..+.. .+.+..
T Consensus 621 i~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~-~~~~~~~v~v~F~a~wC~~C~~~~p~~~~ 699 (780)
T 3apo_A 621 IRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEK-VLQGKTHWVVDFYAPWSGPSQNFAPEFEL 699 (780)
T ss_dssp EEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHH-TTTCSSCEEEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHH-HhcCCCeEEEEEECCCCHHHHHHHHHHHH
Confidence 9999654322224678999 899999999999999876655554443321 234567889988765432 578899
Q ss_pred HHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCccccccc----ccChhhHHHHHHHHH
Q 013319 350 LSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKT----GISVKDQKSSIHELS 413 (445)
Q Consensus 350 lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 413 (445)
+|..+++++.|+.+.+. .++.++++|+|.++||++++..++....+.+ ..+.+++..++..+.
T Consensus 700 la~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l 766 (780)
T 3apo_A 700 LARMIKGKVRAGKVDCQ-AYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKL 766 (780)
T ss_dssp HHHHHTTTCEEEEEETT-TCHHHHHHTTCCSSSEEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHT
T ss_pred HHHHhcCCceEEEEECC-CCHHHHHhcCCCcCCEEEEEcCCCccccccCcccCCcCHHHHHHHHHHHH
Confidence 99999888888666544 6788999999999999998855554444444 356677766665443
No 13
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.85 E-value=1.7e-20 Score=174.11 Aligned_cols=198 Identities=13% Similarity=0.062 Sum_probs=141.9
Q ss_pred hhhHHHHh-hc-CCcEEEEEEECC-CCccCCC-hhHHHHHHHHhcCccEEEEEeCcc--chhhHhHhCCccCCCcEEEEe
Q 013319 206 LQVFKKEI-VE-KGMTWLLFFYSP-SSNRDGY-ESVIEEVANSMEGALKVGSINCET--EASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 206 ~~~f~~~v-~~-~~~~~lV~Fyap-~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~--~~~lc~~~~I~~~~~Pti~~f 279 (445)
.+.+.+.+ .. .+.+++|.||++ ||++|+. .|.|+++|+. .+.+.++.|||++ ++.+|++|+|.++ ||+++|
T Consensus 9 ~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~--Pt~~~~ 85 (226)
T 1a8l_A 9 KKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRA--PATTIT 85 (226)
T ss_dssp HHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSS--SEEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcC--ceEEEE
Confidence 34454444 22 345788999999 9999999 9999999965 5689999999999 9999999999999 999999
Q ss_pred ccCCCCCCCeeeecCcccHHHHHHHHHhhCCCC--ceeccccccchhhhccCCCCE-EEEEecCCCC-----hHHHHHHH
Q 013319 280 SYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPRF--SKRISLNRIEFTFDAKARLPS-VLLLSTKKET-----PIIWRVLS 351 (445)
Q Consensus 280 ~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~~--~~~i~~~~~~~~~~~~~~~~~-vvlF~~~~~~-----~~~~~~lA 351 (445)
..+. .....|.|.++.+++.+|+...+... ...++.+.++ .......++ +|.|+..+.. .+.+..++
T Consensus 86 ~~g~---~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~~~--~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~ 160 (226)
T 1a8l_A 86 QDGK---DFGVRYFGLPAGHEFAAFLEDIVDVSREETNLMDETKQ--AIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFA 160 (226)
T ss_dssp ETTB---CCSEEEESCCCTTHHHHHHHHHHHHHHTCCCCCHHHHH--HHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHH
T ss_pred cCCc---eeeEEEeccCcHHHHHHHHHHHHhhcCCCCCCCHHHHH--HHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHH
Confidence 4321 12367989888889999988754311 1112222222 112334455 7778765432 57889999
Q ss_pred HHhh----ccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhhHHHHHHHH
Q 013319 352 GMYH----ERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 352 ~~~~----~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (445)
..+. +.+.|+.+++. .+.+++++|+|.++||++++..++....+.+..+.+++..++...
T Consensus 161 ~~~~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 161 IENTKAGKGKILGDMVEAI-EYPEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp HHHHHTTCCCEEEEEEEGG-GCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred HhcccccCCcEEEEEEEcc-cCHHHHHhCCCcccCeEEEEeCCceeEEEcCCCCHHHHHHHHHHh
Confidence 9987 56777665544 568899999999999999876544555677777777776666543
No 14
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.84 E-value=2.8e-20 Score=173.17 Aligned_cols=196 Identities=12% Similarity=0.066 Sum_probs=141.3
Q ss_pred hhHHHHh-hcCCcEEEEEEE-----CCCCccCCC-hhHHHHHHHHh--cCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 207 QVFKKEI-VEKGMTWLLFFY-----SPSSNRDGY-ESVIEEVANSM--EGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 207 ~~f~~~v-~~~~~~~lV~Fy-----ap~C~~C~~-~p~~~~~a~~l--~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
+.+.+.+ .+...+++|.|| +|||+||+. .|+|+++|.++ .+.|.+++|||++++++|++|+|+++ |||+
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~--Ptl~ 86 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRV--PTIV 86 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBS--SEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcC--cEEE
Confidence 3454444 244556666666 899999999 99999999998 56899999999999999999999999 9999
Q ss_pred EeccCCCCCCCeeeecCcccHHHHHHHHHhhCC--CCceeccccccchhhhccCCCCE-EEEEecCCCC-----hHHHHH
Q 013319 278 AYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLP--RFSKRISLNRIEFTFDAKARLPS-VLLLSTKKET-----PIIWRV 349 (445)
Q Consensus 278 ~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp--~~~~~i~~~~~~~~~~~~~~~~~-vvlF~~~~~~-----~~~~~~ 349 (445)
+|+. ......|.|.++.++|.+|+...+. .....++.+.++.. .....++ ++.|+..... .+.+..
T Consensus 87 ~~~~----~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~v~F~a~wC~~C~~~~~~~~~ 160 (229)
T 2ywm_A 87 IEGD----KDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELL--QVVDIPIEIWVFVTTSCGYCPSAAVMAWD 160 (229)
T ss_dssp EESS----SCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHH--TTCCSCEEEEEEECTTCTTHHHHHHHHHH
T ss_pred EECC----CcccceecCCccHHHHHHHHHHHHhccCCccCCCHHHHHHH--HhcCCCeEEEEEECCCCcchHHHHHHHHH
Confidence 9942 2356789999999999999987543 11222232222222 2334455 5657665432 477888
Q ss_pred HHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhhHHHHHHHHHhh
Q 013319 350 LSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQKSSIHELSKL 415 (445)
Q Consensus 350 lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (445)
++..+ +.+.|+.+++. .+++++++|+|.++||+++ +++...+.+..+.+++..++......
T Consensus 161 ~~~~~-~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~---~G~~~~~~G~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 161 FALAN-DYITSKVIDAS-ENQDLAEQFQVVGVPKIVI---NKGVAEFVGAQPENAFLGYIMAVYEK 221 (229)
T ss_dssp HHHHC-TTEEEEEEEGG-GCHHHHHHTTCCSSSEEEE---GGGTEEEESCCCHHHHHHHHHHHHHH
T ss_pred HHHHC-CCeEEEEEECC-CCHHHHHHcCCcccCEEEE---CCEEEEeeCCCCHHHHHHHHHHHhhh
Confidence 88888 46777655544 5789999999999999996 44444477777777787776655443
No 15
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.82 E-value=5e-21 Score=155.47 Aligned_cols=70 Identities=47% Similarity=0.932 Sum_probs=65.5
Q ss_pred CcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC-hHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCCC
Q 013319 29 TVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKN-KAAQEKFAEINNAYDILSDEEKRKNYDLYGDEK 98 (445)
Q Consensus 29 ~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~-~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 98 (445)
..|||+||||+++++.++||+|||++++++|||+++. +.+.++|++|++||++|+||.+|+.||.+|+..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 72 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence 4799999999999999999999999999999999984 678899999999999999999999999998763
No 16
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.82 E-value=3.7e-20 Score=156.17 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=95.2
Q ss_pred CCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhc-----CccEEEEEeCccchhhHhHhCC
Q 013319 195 RSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSME-----GALKVGSINCETEASLCKELGV 268 (445)
Q Consensus 195 ~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~-----~~v~~~~Vdc~~~~~lc~~~~I 268 (445)
+..++.|.+|+.++|++.+.++++++||.||||||++|+. .|.|+++|+.+. +.+.+++|||++++.+|++++|
T Consensus 11 ~~~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v 90 (127)
T 3h79_A 11 GERPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRV 90 (127)
T ss_dssp --CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTC
T ss_pred cCCCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCC
Confidence 5566789999999999888777889999999999999999 999999999874 4699999999999999999999
Q ss_pred ccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhh
Q 013319 269 HRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDH 308 (445)
Q Consensus 269 ~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~ 308 (445)
.++ ||+++|..+. ...+..|.|.++.++|.+||.++
T Consensus 91 ~~~--Pt~~~~~~g~--~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 91 SGF--PTMRYYTRID--KQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CSS--SEEEEECSSC--SSSCEECCSCCCHHHHHHHHHHH
T ss_pred ccC--CEEEEEeCCC--CCCceEecCCccHHHHHHHHHhc
Confidence 999 9999995432 11247899999999999999864
No 17
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.82 E-value=1.6e-19 Score=179.66 Aligned_cols=204 Identities=15% Similarity=0.177 Sum_probs=151.2
Q ss_pred CcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc--cchhhHhHhCCcc--CCC
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE--TEASLCKELGVHR--PRS 273 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~--~~~~lc~~~~I~~--~~~ 273 (445)
+.|.+++.+++...+.....+|+|.||++||++|+. .|.|+++|+++++.+.|+.|||+ ++..+|+.+||.. +
T Consensus 117 p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~-- 194 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEEC-- 194 (361)
T ss_dssp CSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTC--
T ss_pred CcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCC--
Confidence 448899999998765555568999999999999999 99999999999999999999999 6899999999998 8
Q ss_pred cEEEEeccCCCCCCCeeeec---CcccHHHHHHHHHhhCCCC------------------ceeccccccchhhhccCCCC
Q 013319 274 PRIFAYSYKAGDKGSLVEYN---EHLVAKNLKSFCRDHLPRF------------------SKRISLNRIEFTFDAKARLP 332 (445)
Q Consensus 274 Pti~~f~~~~~~~g~~~~y~---g~~~~~~l~~fi~~~lp~~------------------~~~i~~~~~~~~~~~~~~~~ 332 (445)
|+++++..+ +....|. +.++.++|.+|+.+.+... +..++..+++.. .....++
T Consensus 195 P~~~~~~~~----~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~-~~~~~k~ 269 (361)
T 3uem_A 195 PAVRLITLE----EEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDV-AFDEKKN 269 (361)
T ss_dssp SEEEEEECC------CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHH-HTCTTCE
T ss_pred ccEEEEEcC----CcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhh-cccCCCc
Confidence 999999432 2334555 7889999999999765321 122222222211 1345778
Q ss_pred EEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccC-C-cccccccccChhhH
Q 013319 333 SVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSN-G-EKDVLKTGISVKDQ 405 (445)
Q Consensus 333 ~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~-~-~~~~~~~~~~~~~~ 405 (445)
++|.|+..+. ..+.|..+|..++++..+..+.++.+ ...+++|+|.++||+++|..+ + ....|.+.++.++|
T Consensus 270 ~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~-~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l 348 (361)
T 3uem_A 270 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST-ANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGF 348 (361)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT-TCBCSSCCCCSSSEEEEECSSSSCCCEECCSCSSHHHH
T ss_pred EEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC-ccchhhcCCcccCeEEEEECCCCcceeEecCCCCHHHH
Confidence 8998887654 25789999999987633333444442 222789999999999999765 3 45678888888666
Q ss_pred HHHHH
Q 013319 406 KSSIH 410 (445)
Q Consensus 406 ~~~~~ 410 (445)
..++.
T Consensus 349 ~~~l~ 353 (361)
T 3uem_A 349 KKFLE 353 (361)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 55443
No 18
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=4.1e-20 Score=142.32 Aligned_cols=72 Identities=44% Similarity=0.828 Sum_probs=68.4
Q ss_pred cCCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 26 KAKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 26 ~~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
.....|||+||||+++++.++||+|||++++++|||++..+.+.++|++|++||++|+||.+|..||.+|..
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 74 (78)
T 2ctp_A 3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG 74 (78)
T ss_dssp CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 456789999999999999999999999999999999999888999999999999999999999999999875
No 19
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=2.2e-19 Score=151.61 Aligned_cols=115 Identities=22% Similarity=0.338 Sum_probs=101.5
Q ss_pred CCCCCCCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCC
Q 013319 190 SQSQSRSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGV 268 (445)
Q Consensus 190 ~~~~~~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I 268 (445)
+....+..++.|.+|+.++|+..+.++++++||.||++||++|+. .|.|+++++++++.+.++.|||+++..+|++|+|
T Consensus 8 ~~~~l~~~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v 87 (130)
T 2dml_A 8 AVSGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGV 87 (130)
T ss_dssp CCCCSSCTTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTC
T ss_pred ccccccCCCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCC
Confidence 334457777889999999999888788889999999999999999 9999999999988899999999999999999999
Q ss_pred ccCCCcEEEEeccCCCCCCC-eeeecCcccHHHHHHHHHhhCC
Q 013319 269 HRPRSPRIFAYSYKAGDKGS-LVEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 269 ~~~~~Pti~~f~~~~~~~g~-~~~y~g~~~~~~l~~fi~~~lp 310 (445)
.++ ||+++|.. ++. ...|.|.++.++|.+|+.+.+.
T Consensus 88 ~~~--Pt~~~~~~----~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 88 QGF--PTIKIFGA----NKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp CSS--SEEEEESS----CTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred Ccc--CEEEEEeC----CCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 999 99999943 233 6779999999999999987653
No 20
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.81 E-value=3.6e-20 Score=142.27 Aligned_cols=69 Identities=52% Similarity=0.910 Sum_probs=66.1
Q ss_pred CcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 29 TVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 29 ~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
..|||+||||+++++.++||+|||++++++|||+++.+.+.+.|++|++||++|+||.+|..||.+|.+
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 70 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccc
Confidence 369999999999999999999999999999999999888999999999999999999999999999876
No 21
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.7e-20 Score=146.65 Aligned_cols=72 Identities=50% Similarity=0.877 Sum_probs=68.1
Q ss_pred cCCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 26 KAKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 26 ~~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
.....|||+||||+++++.++||+|||++++++|||+++.+.+.++|++|++||++|+||.+|..||.+|..
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 74 (88)
T 2ctr_A 3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHS 74 (88)
T ss_dssp SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 345789999999999999999999999999999999999888999999999999999999999999998865
No 22
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.2e-19 Score=143.00 Aligned_cols=71 Identities=55% Similarity=0.924 Sum_probs=67.6
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
....|||+||||+++++.++||+|||++++++|||+++.+.+.++|++|++||++|+||.+|..||.+|+.
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999999999888999999999999999999999999999865
No 23
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=1.3e-19 Score=139.85 Aligned_cols=72 Identities=53% Similarity=0.905 Sum_probs=67.1
Q ss_pred cCCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 26 KAKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 26 ~~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
.....|||+||||+++++.++||+|||++++++|||+++ .+.+.++|++|++||++|+||.+|..||.+|..
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 345789999999999999999999999999999999998 467899999999999999999999999999865
No 24
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.5e-19 Score=142.40 Aligned_cols=72 Identities=43% Similarity=0.765 Sum_probs=66.6
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCCC
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKN--KAAQEKFAEINNAYDILSDEEKRKNYDLYGDEK 98 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 98 (445)
....|||+||||+++++.++||+|||++++++|||+++. +.+.++|++|++||++|+||.+|..||.+|...
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 456899999999999999999999999999999999975 478899999999999999999999999998763
No 25
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=2.7e-19 Score=139.16 Aligned_cols=71 Identities=46% Similarity=0.827 Sum_probs=66.0
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKN--KAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
....|||+||||+++++.++||+|||++++++|||+++. +.+.++|++|++||++|+||.+|..||.+|..
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 456899999999999999999999999999999999985 36788999999999999999999999999865
No 26
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.78 E-value=2.7e-19 Score=135.85 Aligned_cols=68 Identities=47% Similarity=0.849 Sum_probs=62.4
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCC
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGD 96 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 96 (445)
....|||+||||+++++.++||+|||++++++|||+++.. .++|++|++||++|+||.+|..||.+|+
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG--AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC--HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH--HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 3568999999999999999999999999999999998753 6899999999999999999999999885
No 27
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.76 E-value=2.9e-19 Score=141.86 Aligned_cols=70 Identities=46% Similarity=0.821 Sum_probs=64.1
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCCC
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGDEK 98 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 98 (445)
....|||+||||+++++.++||+|||++++++|||+++.. .++|++|++||++|+||.+|..||.+|...
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 74 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD--TEKFKEISEAFEILNDPQKREIYDQYGLEA 74 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC--HHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--HHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence 3568999999999999999999999999999999998643 579999999999999999999999998653
No 28
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.76 E-value=1.7e-18 Score=141.69 Aligned_cols=106 Identities=17% Similarity=0.304 Sum_probs=95.0
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
...|.+|+.++|++.+.+++++++|.||++||++|+. .|.|+++++++.+.+.++.|||++++.+|++|+|.++ ||+
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~--Pt~ 80 (111)
T 3gnj_A 3 AMSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGV--PQI 80 (111)
T ss_dssp CCCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSS--CEE
T ss_pred CCcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcC--CEE
Confidence 3458999999999988677889999999999999999 9999999999988899999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
++| .+|+. ..+.|..+.++|.+|+.+.+.
T Consensus 81 ~~~-----~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 81 LYF-----KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEE-----ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEE-----ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 999 34544 468899999999999987653
No 29
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=3.3e-18 Score=146.31 Aligned_cols=111 Identities=20% Similarity=0.267 Sum_probs=97.9
Q ss_pred CCCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCc---cEEEEEeCccchhhHhHhCCc
Q 013319 194 SRSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGA---LKVGSINCETEASLCKELGVH 269 (445)
Q Consensus 194 ~~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~---v~~~~Vdc~~~~~lc~~~~I~ 269 (445)
.+...+.|.+|+.++|++.+ ..++++||.||++||++|+. .|.|+++++.+.+. +.++.|||+++..+|++|+|.
T Consensus 12 ~~~~~~~v~~l~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~ 90 (140)
T 2dj1_A 12 EVKEENGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVS 90 (140)
T ss_dssp CCEEETTEEECCTTTHHHHH-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCC
T ss_pred ccCCCCCCEEcChHhHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCC
Confidence 35556779999999998755 56789999999999999999 99999999999874 999999999999999999999
Q ss_pred cCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCCCC
Q 013319 270 RPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPRF 312 (445)
Q Consensus 270 ~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~~ 312 (445)
++ ||+++| .+|+...|.|.++.+.|.+|+.+.+...
T Consensus 91 ~~--Pt~~~~-----~~G~~~~~~g~~~~~~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 91 GY--PTIKIL-----KKGQAVDYDGSRTQEEIVAKVREVSQPD 126 (140)
T ss_dssp SS--SEEEEE-----ETTEEEECCSCCCHHHHHHHHHHHHSSS
T ss_pred cc--CeEEEE-----ECCcEEEcCCCCCHHHHHHHHHHhcCCC
Confidence 99 999999 3455778999999999999999887643
No 30
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.75 E-value=7.6e-19 Score=141.08 Aligned_cols=68 Identities=47% Similarity=0.845 Sum_probs=64.1
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 30 VDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKN--KAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 30 ~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
.|||+||||+++++.++||+|||++++++|||+++. +.+.++|++|++||++|+||.+|..||.+|..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~ 71 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGRE 71 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 689999999999999999999999999999999975 45789999999999999999999999999865
No 31
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.1e-18 Score=143.66 Aligned_cols=71 Identities=35% Similarity=0.583 Sum_probs=66.6
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
....|||+||||+++|+.++||+|||++++++|||+++ ++.+.++|++|++||++|+||.+|+.||.+|..
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 88 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRS 88 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhh
Confidence 35689999999999999999999999999999999998 577899999999999999999999999998765
No 32
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=2.5e-18 Score=140.78 Aligned_cols=72 Identities=50% Similarity=0.831 Sum_probs=66.8
Q ss_pred cCCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 26 KAKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 26 ~~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
.....|||+||||+++|+.++||+|||++++++|||+++ .+.+.++|++|++||++|+||.+|+.||.+|..
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 345689999999999999999999999999999999997 477899999999999999999999999998754
No 33
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=2e-18 Score=138.92 Aligned_cols=70 Identities=34% Similarity=0.589 Sum_probs=65.0
Q ss_pred cCCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-ChHHHHHHHHHHHHHHHcCCHHHHHHhhhcC
Q 013319 26 KAKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKNYDLYG 95 (445)
Q Consensus 26 ~~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g 95 (445)
.....|||+||||+++|+.++||+|||+|++++|||+++ .+.+.++|++|++||++|+||.+|..||...
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 356789999999999999999999999999999999996 5778999999999999999999999999853
No 34
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=4.5e-18 Score=143.91 Aligned_cols=106 Identities=22% Similarity=0.408 Sum_probs=95.6
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhc----CccEEEEEeCccchhhHhHhCCccCC
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSME----GALKVGSINCETEASLCKELGVHRPR 272 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~----~~v~~~~Vdc~~~~~lc~~~~I~~~~ 272 (445)
++.|.+|+.++|++.+.++++++||.||++||++|+. .|.|+++++.+. +.+.++.|||+.++.+|++|+|.++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~- 84 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF- 84 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSS-
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCee-
Confidence 4568999999999888788889999999999999999 999999999998 7899999999999999999999999
Q ss_pred CcEEEEeccCCCCCC-CeeeecCcccHHHHHHHHHhhCC
Q 013319 273 SPRIFAYSYKAGDKG-SLVEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 273 ~Pti~~f~~~~~~~g-~~~~y~g~~~~~~l~~fi~~~lp 310 (445)
||+++|.. | ....|.|.++.++|.+|+.+.+.
T Consensus 85 -Pt~~~~~~-----g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 85 -PTIKIFQK-----GESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp -SEEEEEET-----TEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred -CeEEEEeC-----CCceEEecCCCCHHHHHHHHHHHhh
Confidence 99999943 3 35669999999999999997764
No 35
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.74 E-value=4.9e-18 Score=138.51 Aligned_cols=98 Identities=12% Similarity=0.204 Sum_probs=83.8
Q ss_pred ccc-ChhhHHHHhhcC-CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 202 RAL-NLQVFKKEIVEK-GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 202 ~~L-t~~~f~~~v~~~-~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
.++ +.++|++.+.+. +++++|.|||+||++|+. .|.|+++++.+. .+.+++|||++++++|++|+|+++ ||+++
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~~l~~~~~V~~~--PT~~~ 79 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECEDIAQDNQIACM--PTFLF 79 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCBS--SEEEE
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCHHHHHHcCCCee--cEEEE
Confidence 444 567898887664 569999999999999999 999999999885 588999999999999999999999 99999
Q ss_pred eccCCCCCCCeee-ecCcccHHHHHHHHHhh
Q 013319 279 YSYKAGDKGSLVE-YNEHLVAKNLKSFCRDH 308 (445)
Q Consensus 279 f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~ 308 (445)
| .+|+.+. +.| .+.++|.+||.++
T Consensus 80 ~-----~~G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 80 M-----KNGQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp E-----ETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred E-----ECCEEEEEEeC-cCHHHHHHHHHhc
Confidence 9 4565544 667 5889999999874
No 36
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.73 E-value=9e-18 Score=143.84 Aligned_cols=110 Identities=19% Similarity=0.295 Sum_probs=96.0
Q ss_pred CCCCCcccccChhhHHHHhhc-----------CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhh
Q 013319 195 RSSSGNIRALNLQVFKKEIVE-----------KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASL 262 (445)
Q Consensus 195 ~~~~~~V~~Lt~~~f~~~v~~-----------~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~l 262 (445)
......|.+|+.++|...+.+ .++++||.||++||++|+. .|.|+++++.+.+.+.++.|||++++.+
T Consensus 18 ~~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 97 (141)
T 3hxs_A 18 EKPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPEL 97 (141)
T ss_dssp -----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHH
T ss_pred cCCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHH
Confidence 334567999999999988876 4679999999999999999 9999999999998899999999999999
Q ss_pred HhHhCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCC
Q 013319 263 CKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 263 c~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp 310 (445)
|++|+|.++ ||+++|. .+|++..+.|..+.+.|.+||.+.+.
T Consensus 98 ~~~~~v~~~--Pt~~~~~----~~g~~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 98 ARDFGIQSI--PTIWFVP----MKGEPQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHTTCCSS--SEEEEEC----SSSCCEEEESCCCHHHHHHHHHHTTC
T ss_pred HHHcCCCCc--CEEEEEe----CCCCEEEEeCCCCHHHHHHHHHHHHc
Confidence 999999999 9999993 35666789999999999999988764
No 37
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.73 E-value=2.3e-18 Score=137.54 Aligned_cols=70 Identities=37% Similarity=0.703 Sum_probs=64.4
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC-------hHHHHHHHHHHHHHHHcCCHHHHHHhhhcCC
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKN-------KAAQEKFAEINNAYDILSDEEKRKNYDLYGD 96 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~-------~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 96 (445)
....|||+||||+++++.+|||+|||++++++|||+++. +.+.++|++|++||++|+||.+|+.||.+..
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 356899999999999999999999999999999999863 5678999999999999999999999998754
No 38
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.73 E-value=5.7e-18 Score=137.90 Aligned_cols=104 Identities=18% Similarity=0.355 Sum_probs=93.2
Q ss_pred CcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
+.|.+|+.++|++.+.+++++++|.||++||++|+. .|.++++++++.+.+.++.|||++++.+|++++|.++ ||++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--Pt~~ 79 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGI--PTLL 79 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSS--SEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCccc--CEEE
Confidence 458999999998888788889999999999999999 9999999999988899999999999999999999999 9999
Q ss_pred EeccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 278 AYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 278 ~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
+|+ +|+. ..+.|..+.++|.+|+.+.+
T Consensus 80 ~~~-----~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 80 LFK-----NGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEE-----TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEe-----CCEEEEEEecCCCHHHHHHHHHHhh
Confidence 993 4543 45789889999999998754
No 39
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.73 E-value=1.2e-17 Score=137.53 Aligned_cols=102 Identities=21% Similarity=0.278 Sum_probs=92.4
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEe
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f 279 (445)
|.+|+.++|++.+ .+++++|.||++||++|+. .|.|+++++++.+.+.++.|||+++..+|++|+|.++ ||+++|
T Consensus 3 v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~--Pt~~~~ 78 (112)
T 2voc_A 3 IVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSI--PTLLVL 78 (112)
T ss_dssp CEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSB--SEEEEE
T ss_pred eEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcc--cEEEEE
Confidence 6889999998877 6779999999999999999 9999999999988899999999999999999999999 999999
Q ss_pred ccCCCCCCCe-eeecCcccHHHHHHHHHhhCCC
Q 013319 280 SYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 280 ~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
.+|+. ..+.|..+.++|.+|+.+++++
T Consensus 79 -----~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 79 -----KDGEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp -----ETTEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred -----eCCEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 34543 4588999999999999988875
No 40
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.72 E-value=2.9e-19 Score=174.03 Aligned_cols=70 Identities=33% Similarity=0.676 Sum_probs=0.0
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCC
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGD 96 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 96 (445)
....|||+||||+++|+.+|||+|||+|+++||||+++.+.+.++|++|++||++|+||.+|+.||.++.
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 94 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ 94 (329)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence 4568999999999999999999999999999999999888889999999999999999999999999853
No 41
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.72 E-value=1.3e-17 Score=142.31 Aligned_cols=109 Identities=16% Similarity=0.267 Sum_probs=96.6
Q ss_pred CCCcccccChhhHHHHhhc-----------CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHh
Q 013319 197 SSGNIRALNLQVFKKEIVE-----------KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCK 264 (445)
Q Consensus 197 ~~~~V~~Lt~~~f~~~v~~-----------~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~ 264 (445)
.+..|.+|+.++|.+.+.+ .++++||.||++||++|+. .|.|+++++++.+.+.++.|||+++..+|+
T Consensus 7 ~~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~ 86 (136)
T 2l5l_A 7 GNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAG 86 (136)
T ss_dssp CTTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHH
T ss_pred cCCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHH
Confidence 3456899999999988764 4579999999999999999 999999999998889999999999999999
Q ss_pred HhCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCCC
Q 013319 265 ELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 265 ~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
+|+|.++ ||+++|. .+|+.+.+.|..+.++|.+||.+.++.
T Consensus 87 ~~~v~~~--Pt~~~~~----~~G~~~~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 87 AFGIRSI--PSILFIP----MEGKPEMAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp HTTCCSS--CEEEEEC----SSSCCEEEESCCCHHHHHHHHHHHHTS
T ss_pred HcCCCCC--CEEEEEC----CCCcEEEEeCCCCHHHHHHHHHHHhhc
Confidence 9999999 9999993 346666889999999999999987653
No 42
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.72 E-value=1.2e-17 Score=135.52 Aligned_cols=104 Identities=13% Similarity=0.216 Sum_probs=92.9
Q ss_pred CcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
+.|.+|+.++|++.+...+++++|.||++||++|+. .|.++++++.+.+.+.++.|||++++.+|++++|.++ ||++
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--Pt~~ 79 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSI--PTLM 79 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSS--SEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCcc--CEEE
Confidence 458999999998888777889999999999999999 9999999999988899999999999999999999999 9999
Q ss_pred EeccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 278 AYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 278 ~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
+| .+|+. ..+.|..+.+.|.+|+.+.+
T Consensus 80 ~~-----~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 80 LV-----RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp EE-----ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred EE-----eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 99 34544 34889889999999998753
No 43
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.72 E-value=1.2e-17 Score=148.22 Aligned_cols=117 Identities=14% Similarity=0.126 Sum_probs=96.5
Q ss_pred CCcccccChhhHHHHhhcC-CcEEEEEEEC-------CCCccCCC-hhHHHHHHHHhc-----CccEEEEEeCccchhhH
Q 013319 198 SGNIRALNLQVFKKEIVEK-GMTWLLFFYS-------PSSNRDGY-ESVIEEVANSME-----GALKVGSINCETEASLC 263 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~-~~~~lV~Fya-------p~C~~C~~-~p~~~~~a~~l~-----~~v~~~~Vdc~~~~~lc 263 (445)
++.|++||+++|++.|... +.++||.|+| +||++|+. +|+|+++|+++. +.+.|++||+++++.++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 4558999999998876543 4589999999 49999999 999999999998 78999999999999999
Q ss_pred hHhCCccCCCcEEEEeccCCCCC--------CCeeee---cC-cccHHHHHHHHHhhCCCCceec
Q 013319 264 KELGVHRPRSPRIFAYSYKAGDK--------GSLVEY---NE-HLVAKNLKSFCRDHLPRFSKRI 316 (445)
Q Consensus 264 ~~~~I~~~~~Pti~~f~~~~~~~--------g~~~~y---~g-~~~~~~l~~fi~~~lp~~~~~i 316 (445)
.+|+|+++ |||++|+.+.... .....| .+ .++++.|.+||.+.++..+.+.
T Consensus 97 ~~~~I~si--Ptl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~ 159 (178)
T 3ga4_A 97 KDLKLQNV--PHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVP 159 (178)
T ss_dssp HHTTCCSS--CEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCC
T ss_pred HHcCCCCC--CEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCcccc
Confidence 99999999 9999997664222 023445 35 7899999999999887544433
No 44
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.72 E-value=1.6e-17 Score=137.79 Aligned_cols=102 Identities=9% Similarity=0.125 Sum_probs=88.8
Q ss_pred CcccccChhhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 199 GNIRALNLQVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
..+...+.++|++.+.+ +++++||.||++||++|+. .|.|+++++++.+ +.|+.|||++++.+|++|+|.++ ||+
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~--Pt~ 88 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSM--PTF 88 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSS--SEE
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccc--cEE
Confidence 34677889999886653 6779999999999999999 9999999999977 99999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
++| .+|+. ..+.|. +.+.|.++|.+.+
T Consensus 89 ~~~-----~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 89 QFF-----KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEE-----SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEE-----eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 999 34544 457888 8999999998764
No 45
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.72 E-value=1.9e-17 Score=136.15 Aligned_cols=106 Identities=18% Similarity=0.267 Sum_probs=94.8
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
++.|.+|+.++|++.+...+++++|.||++||++|+. .|.|+++++.+.+.+.++.|||++++.+|++|+|.++ ||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~--Pt~ 83 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGV--PAL 83 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSS--SEE
T ss_pred cCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCce--eEE
Confidence 3458999999998887777889999999999999999 9999999999987899999999999999999999999 999
Q ss_pred EEeccCCCCCCCee-eecCcccHHHHHHHHHhhCC
Q 013319 277 FAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 277 ~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp 310 (445)
++| .+|+.+ .+.|..+.++|.+|+.+.++
T Consensus 84 ~~~-----~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 84 RLV-----KGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEE-----ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEE-----cCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 999 345444 58899899999999998765
No 46
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.72 E-value=1e-17 Score=143.74 Aligned_cols=107 Identities=21% Similarity=0.282 Sum_probs=96.6
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
.+.|.+|+.++|.+.+.+.++++||.||++||++|+. .|.|+++++.+.+.+.|+.|||++++.+|++|+|.++ ||+
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~--Pt~ 82 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGT--PTF 82 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEE--SEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcC--CEE
Confidence 4568999999998788888889999999999999999 9999999999998899999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCCC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
++| .+|+. ..+.|..+.+.|.+|+.+.++.
T Consensus 83 ~~~-----~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 83 KFF-----CHGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEE-----ETTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEE-----eCCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 999 34544 4688999999999999988763
No 47
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=1.3e-17 Score=140.15 Aligned_cols=104 Identities=19% Similarity=0.375 Sum_probs=92.0
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccchhhHhHhCCccCCCcE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETEASLCKELGVHRPRSPR 275 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~~~lc~~~~I~~~~~Pt 275 (445)
.+.|.+|+.++|++.+ +. .+||.||++||++|+. .|.|+++++++.+ .+.++.|||+++..+|++|+|.++ ||
T Consensus 6 ~~~v~~l~~~~f~~~~-~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~--Pt 80 (126)
T 1x5e_A 6 SGNVRVITDENWRELL-EG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINAL--PT 80 (126)
T ss_dssp CCSEEECCTTTHHHHT-SS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSS--SE
T ss_pred CCccEEecHHHHHHHh-CC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCccc--CE
Confidence 4568999999998654 33 3999999999999999 9999999999986 799999999999999999999999 99
Q ss_pred EEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCCC
Q 013319 276 IFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 276 i~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
+++| .+|++..|.|.++.++|.+|+.+.+..
T Consensus 81 ~~~~-----~~G~~~~~~G~~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 81 IYHC-----KDGEFRRYQGPRTKKDFINFISDKEWK 111 (126)
T ss_dssp EEEE-----ETTEEEECCSCCCHHHHHHHHHTCGGG
T ss_pred EEEE-----eCCeEEEeecCCCHHHHHHHHHHHhhc
Confidence 9999 356667899999999999999987653
No 48
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.71 E-value=1.9e-17 Score=134.13 Aligned_cols=101 Identities=18% Similarity=0.274 Sum_probs=91.0
Q ss_pred cccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 200 NIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 200 ~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
.|.+++.++|++.+ ++++++|.||++||++|+. .|.|+++++++.+.+.++.||+++++.+|++++|.++ ||+++
T Consensus 4 ~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--Pt~~~ 79 (106)
T 3die_A 4 AIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSI--PTLIV 79 (106)
T ss_dssp CCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSB--SEEEE
T ss_pred ceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCccc--CEEEE
Confidence 48899999998877 6779999999999999999 9999999999988899999999999999999999999 99999
Q ss_pred eccCCCCCCC-eeeecCcccHHHHHHHHHhhC
Q 013319 279 YSYKAGDKGS-LVEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 279 f~~~~~~~g~-~~~y~g~~~~~~l~~fi~~~l 309 (445)
|+ +|+ ...+.|..+.++|.+++.+.+
T Consensus 80 ~~-----~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 80 FK-----DGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EE-----TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred Ee-----CCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 93 454 346889999999999998754
No 49
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=7.7e-18 Score=142.66 Aligned_cols=111 Identities=15% Similarity=0.273 Sum_probs=95.8
Q ss_pred CCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhc--CccEEEEEeCccchhhHhHhCCccCCC
Q 013319 197 SSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSME--GALKVGSINCETEASLCKELGVHRPRS 273 (445)
Q Consensus 197 ~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~--~~v~~~~Vdc~~~~~lc~~~~I~~~~~ 273 (445)
+++.|.+|+.++|+..+.+.++++||.||++||++|+. .|.|+++++++. +.+.++.|||+++..+|++|+|.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~-- 82 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGF-- 82 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSS--
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcC--
Confidence 45679999999998877766789999999999999999 999999999998 4699999999999999999999999
Q ss_pred cEEEEeccCCCCCCCeeeec-CcccHHHHHHHHHhhCCC
Q 013319 274 PRIFAYSYKAGDKGSLVEYN-EHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 274 Pti~~f~~~~~~~g~~~~y~-g~~~~~~l~~fi~~~lp~ 311 (445)
||+++|..+. ....+.|. |.++.++|.+||.+.++.
T Consensus 83 Pt~~~~~~g~--~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 83 PTIYFAPSGD--KKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp SEEEEECTTC--TTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred CEEEEEeCCC--cccceEecCCCcCHHHHHHHHHHhccc
Confidence 9999994332 12345677 568999999999998875
No 50
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.71 E-value=1.7e-16 Score=149.24 Aligned_cols=192 Identities=12% Similarity=0.079 Sum_probs=135.9
Q ss_pred hhhHHHHhhcCCcEEEEEEECCC--CccCCC-hhHHHHHHHHh---cCc--cEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 206 LQVFKKEIVEKGMTWLLFFYSPS--SNRDGY-ESVIEEVANSM---EGA--LKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 206 ~~~f~~~v~~~~~~~lV~Fyap~--C~~C~~-~p~~~~~a~~l---~~~--v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
.+.|.+.+..-..+++|.||++| |++|+. .|.++++|+.. ++. |.|+.+|+++++.+|++|+|+++ ||++
T Consensus 14 ~~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~--Pt~~ 91 (243)
T 2hls_A 14 RRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERV--PTVA 91 (243)
T ss_dssp HHHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSS--SEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcC--CEEE
Confidence 34565555444568999999999 999999 99999999984 333 99999999999999999999999 9999
Q ss_pred EeccCCCCCCCeeeecCcccHHHHHHHHHhhCCC--CceeccccccchhhhccCCCCEEEEEecCCC-----ChHHHHHH
Q 013319 278 AYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPR--FSKRISLNRIEFTFDAKARLPSVLLLSTKKE-----TPIIWRVL 350 (445)
Q Consensus 278 ~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~--~~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~-----~~~~~~~l 350 (445)
+| +| ...|.|....+.+..|+...+.. ....++.+..+ ........++++.|+..+. ..+.|..+
T Consensus 92 i~------~g-~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l~~~~~~-~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~l 163 (243)
T 2hls_A 92 FL------GG-EVRWTGIPAGEEIRALVEVIMRLSEDESGLEDATKE-ALKSLKGRVHIETIITPSCPYCPYAVLLAHMF 163 (243)
T ss_dssp ET------TT-TEEEESCCCTTHHHHHHHHHHHHHTTCCCCCHHHHH-HHHHCCSCEEEEEEECSSCSSHHHHHHHHHHH
T ss_pred EE------CC-ceeEcCCCcHHHHHHHHHHHHhccCCCCCCCHHHHH-HHHHcCCCcEEEEEECCCCCCcHHHHHHHHHH
Confidence 98 13 57898987778888888764421 11111111111 1112234455666765432 25778888
Q ss_pred HHHhh----ccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhhHHHHHHHH
Q 013319 351 SGMYH----ERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 351 A~~~~----~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (445)
|..+. ..+.+..+++. .+++++++|+|.++||+++ +++. +|.+..+.++++.++...
T Consensus 164 a~~~~~~~~~~v~~~~vd~~-~~~~~~~~~~V~~vPt~~i---~G~~-~~~G~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 164 AYEAWKQGNPVILSEAVEAY-ENPDIADKYGVMSVPSIAI---NGYL-VFVGVPYEEDFLDYVKSA 224 (243)
T ss_dssp HHHHHHTTCCCEEEEEEETT-TCHHHHHHTTCCSSSEEEE---TTEE-EEESCCCHHHHHHHHHHH
T ss_pred HHHcccccCCcEEEEEEECc-cCHHHHHHcCCeeeCeEEE---CCEE-EEeCCCCHHHHHHHHHHH
Confidence 88884 45666555433 5688999999999999986 5543 477777777776655543
No 51
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.71 E-value=1.2e-17 Score=141.43 Aligned_cols=102 Identities=17% Similarity=0.177 Sum_probs=92.1
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCC--ccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSS--NRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C--~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
...+|+++|++.|.+.+.++||.|||+|| ++|+. +|+++++++++.+.++|++||.++++.++.+|+|+++ |||+
T Consensus 17 ~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~si--PTli 94 (137)
T 2qsi_A 17 PTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVC--PSLA 94 (137)
T ss_dssp CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSS--SEEE
T ss_pred CcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccC--CEEE
Confidence 46889999999887666699999999999 99999 9999999999999999999999999999999999999 9999
Q ss_pred EeccCCCCCCCeee-ecCcccHHHHHHHHHhhC
Q 013319 278 AYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 278 ~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~l 309 (445)
+| ++|+.+. ..|..+.++|.++|.+++
T Consensus 95 lF-----kdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 95 VV-----QPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EE-----ECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EE-----ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99 5665554 778888899999998765
No 52
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.71 E-value=1.5e-17 Score=136.45 Aligned_cols=104 Identities=12% Similarity=0.216 Sum_probs=93.5
Q ss_pred cccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 200 NIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 200 ~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
.|.+++.++|.+.+.+++++++|.||++||++|+. .|.|+++++++.+.+.++.||++.++.+|++|+|.++ ||+++
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--Pt~~~ 83 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSI--PTLNV 83 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSS--SEEEE
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcc--cEEEE
Confidence 47899999998888888889999999999999999 9999999999988899999999999999999999999 99999
Q ss_pred eccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 279 YSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 279 f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
|+ +|+. ..+.|..+.++|.+++.+.++
T Consensus 84 ~~-----~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 84 YQ-----GGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EE-----TTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred Ee-----CCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 93 4543 458899889999999988764
No 53
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.71 E-value=2.5e-17 Score=136.29 Aligned_cols=112 Identities=15% Similarity=0.252 Sum_probs=95.0
Q ss_pred CCCCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC---ccEEEEEeCccchhhHhHhCCcc
Q 013319 195 RSSSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG---ALKVGSINCETEASLCKELGVHR 270 (445)
Q Consensus 195 ~~~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~---~v~~~~Vdc~~~~~lc~~~~I~~ 270 (445)
|..++.|.+|+.++|++.+ .++++++|.||++||++|+. .|.|+++++.++. .+.++.|||++++.+|++++|.+
T Consensus 3 ~~~~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 81 (120)
T 1mek_A 3 PEEEDHVLVLRKSNFAEAL-AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRG 81 (120)
T ss_dssp CCEETTEEECCTTTHHHHH-HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCS
T ss_pred ccCCCCcEEechhhHHHHH-ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCc
Confidence 4556779999999998755 56779999999999999999 9999999999873 69999999999999999999999
Q ss_pred CCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCCC
Q 013319 271 PRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 271 ~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
+ ||+++|+.+.. -....|.|..+.++|.+|+.+.+.+
T Consensus 82 ~--Pt~~~~~~g~~--~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 82 Y--PTIKFFRNGDT--ASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp S--SEEEEEESSCS--SSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred c--cEEEEEeCCCc--CCcccccCccCHHHHHHHHHhccCC
Confidence 9 99999943210 0126789999999999999988764
No 54
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.71 E-value=3.3e-17 Score=133.12 Aligned_cols=102 Identities=20% Similarity=0.318 Sum_probs=92.2
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEe
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f 279 (445)
|.+++.++|++.+.+++++++|.||++||++|+. .|.|+++++.+.+.+.++.||++.++.+|++++|.++ ||+++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--Pt~~~~ 80 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSI--PTIMVF 80 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSS--CEEEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcC--CEEEEE
Confidence 7889999999888788889999999999999999 9999999999988899999999999999999999999 999999
Q ss_pred ccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 280 SYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 280 ~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
.+|+. ..+.|..+.++|.+++.+.+
T Consensus 81 -----~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 81 -----KGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp -----SSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred -----eCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 34544 45889888999999998765
No 55
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.71 E-value=2e-17 Score=137.67 Aligned_cols=105 Identities=13% Similarity=0.219 Sum_probs=94.2
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
.+.|..++.++|++.+.++++++||.||++||++|+. .|.|+++++++.+.+.++.|||+++..+|++|+|.++ ||+
T Consensus 12 ~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~--Pt~ 89 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAV--PTV 89 (119)
T ss_dssp CSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSS--SEE
T ss_pred ceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcc--cEE
Confidence 4568999999999988888889999999999999999 9999999999988899999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
++| .+|+. ..+.|..+.++|.+|+.+.+
T Consensus 90 ~~~-----~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 90 LAM-----KNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEE-----ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEE-----eCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 999 34543 45889889999999998754
No 56
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.71 E-value=1.5e-17 Score=140.64 Aligned_cols=105 Identities=19% Similarity=0.369 Sum_probs=93.7
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
++.|.+|+.++|++.+.+.++++||.||++||++|+. .|.|+++++.+.+.+.++.|||++++.+|++|+|.++ ||+
T Consensus 21 ~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~--Pt~ 98 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGI--PTL 98 (128)
T ss_dssp CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSS--SEE
T ss_pred ccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCcc--CEE
Confidence 3458999999998888778889999999999999999 9999999999988899999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
++| .+|+. ..+.|..+.++|.+|+.+.+
T Consensus 99 ~~~-----~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 99 LLF-----KNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEE-----ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEE-----eCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 999 34543 45889989999999998754
No 57
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.71 E-value=1.6e-17 Score=138.29 Aligned_cols=105 Identities=14% Similarity=0.238 Sum_probs=91.5
Q ss_pred CCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-----ccEEEEEeCccchhhHhHhCCcc
Q 013319 197 SSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-----ALKVGSINCETEASLCKELGVHR 270 (445)
Q Consensus 197 ~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-----~v~~~~Vdc~~~~~lc~~~~I~~ 270 (445)
.++.|.+|+.++|++.+..+++++||.||++||++|+. .|.|+++++++.+ .+.++.|||+++. +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 45668999999998876677889999999999999999 9999999999987 7999999999876 666 9999
Q ss_pred CCCcEEEEeccCCCCCCC--eeeecCcccHHHHHHHHHhhCC
Q 013319 271 PRSPRIFAYSYKAGDKGS--LVEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 271 ~~~Pti~~f~~~~~~~g~--~~~y~g~~~~~~l~~fi~~~lp 310 (445)
+ ||+++|.. ++. ...|.|.++.++|.+|+.+++.
T Consensus 82 ~--Pt~~~~~~----~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 82 F--PTIKLYPA----GAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp S--SEEEEECS----SCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred C--CeEEEEeC----cCCCCceEecCCCCHHHHHHHHHhccC
Confidence 9 99999943 223 5679999999999999998765
No 58
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.71 E-value=1e-17 Score=139.65 Aligned_cols=106 Identities=20% Similarity=0.401 Sum_probs=93.0
Q ss_pred CcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
+.|.+|+.++|.+.+.++++++||.||++||++|+. .|.|+++++.+.+.+.++.|||++++.+|++++|.++ ||++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~--Pt~~ 80 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAY--PSVK 80 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSS--SEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCcc--ceEE
Confidence 458999999998878888889999999999999999 9999999999988899999999999999999999999 9999
Q ss_pred EeccCCCCCCCeeeecCc----ccHHHHHHHHHhhCC
Q 013319 278 AYSYKAGDKGSLVEYNEH----LVAKNLKSFCRDHLP 310 (445)
Q Consensus 278 ~f~~~~~~~g~~~~y~g~----~~~~~l~~fi~~~lp 310 (445)
+|..+ +....+.|. ++.+.|.+|+.+.+.
T Consensus 81 ~~~~~----~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 81 LYQYE----RAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEE----GGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EEeCC----CccceeeccccCcCCHHHHHHHHHHHHH
Confidence 99443 233456664 788999999987764
No 59
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.70 E-value=6.5e-18 Score=138.56 Aligned_cols=72 Identities=38% Similarity=0.631 Sum_probs=66.3
Q ss_pred cCCCcCcccccCCCCCC-CHHHHHHHHHHHHHhhCCCCCCC----hHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 26 KAKTVDLYKVLGVERNA-SQREIQKAFHKLSLQYHPDKNKN----KAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 26 ~~~~~d~y~vLgv~~~a-~~~~ik~ayr~l~~~~hPd~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
.....|||+||||+++| +.++||+|||++++++|||+++. +.+.++|++|++||++|+||.+|..||.++..
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 34578999999999999 99999999999999999999986 56789999999999999999999999998743
No 60
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.70 E-value=1.6e-17 Score=141.07 Aligned_cols=102 Identities=12% Similarity=0.142 Sum_probs=91.6
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCC--CccCCC-hhHHHHHHHHhcCc-cEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPS--SNRDGY-ESVIEEVANSMEGA-LKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~--C~~C~~-~p~~~~~a~~l~~~-v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
+..+|+++|++.|. ++.++||.||++| |++|+. +|+++++|+++.+. ++|++||++++++++.+|+|+++ |||
T Consensus 19 ~~~~t~~~F~~~v~-~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sI--PTl 95 (140)
T 2qgv_A 19 WTPVSESRLDDWLT-QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRF--PAT 95 (140)
T ss_dssp CEECCHHHHHHHHH-TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSS--SEE
T ss_pred CccCCHHHHHHHHh-CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccC--CEE
Confidence 67899999998885 6668999999999 999999 99999999999998 99999999999999999999999 999
Q ss_pred EEeccCCCCCCCeee-ecCcccHHHHHHHHHhhCC
Q 013319 277 FAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 277 ~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~lp 310 (445)
++| ++|+.+. ..|..+.++|.++|.+.+.
T Consensus 96 ilF-----k~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 96 LVF-----TGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp EEE-----ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEE-----ECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 999 5565544 7788888999999987764
No 61
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.70 E-value=1.8e-17 Score=142.52 Aligned_cols=103 Identities=8% Similarity=0.067 Sum_probs=89.3
Q ss_pred cccc-ChhhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 201 IRAL-NLQVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 201 V~~L-t~~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
|.+| |.++|++.|++ ++.++||.|||+||++|+. .|+++++|+++.+.+.|++||++++++++.+|+|++. ||++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~si--PT~~ 100 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDP--VSVM 100 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSS--EEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCC--CEEE
Confidence 5566 45889988874 6789999999999999999 9999999999988899999999999999999999999 9999
Q ss_pred EeccCCCCCCCee----------eecCccc-HHHHHHHHHhhCC
Q 013319 278 AYSYKAGDKGSLV----------EYNEHLV-AKNLKSFCRDHLP 310 (445)
Q Consensus 278 ~f~~~~~~~g~~~----------~y~g~~~-~~~l~~fi~~~lp 310 (445)
+| .+|+.+ ...|... .++|.++|...+.
T Consensus 101 fF-----k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 101 FF-----YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp EE-----ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred EE-----ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 99 455555 5778766 7889999887654
No 62
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.70 E-value=2.9e-17 Score=134.12 Aligned_cols=102 Identities=19% Similarity=0.341 Sum_probs=89.8
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhc---CccEEEEEeCccchhhHhHhCCccCCC
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSME---GALKVGSINCETEASLCKELGVHRPRS 273 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~---~~v~~~~Vdc~~~~~lc~~~~I~~~~~ 273 (445)
++.|.+||.++|++.+. +++++|.||++||++|+. .|.|+++++.+. ..+.++.|||++++.+|++++|.++
T Consensus 4 ~~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~-- 79 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGY-- 79 (111)
T ss_dssp -CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSS--
T ss_pred CCcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcc--
Confidence 34589999999988776 568999999999999999 999999999876 3699999999999999999999999
Q ss_pred cEEEEeccCCCCCCC-eeeecCcccHHHHHHHHHhh
Q 013319 274 PRIFAYSYKAGDKGS-LVEYNEHLVAKNLKSFCRDH 308 (445)
Q Consensus 274 Pti~~f~~~~~~~g~-~~~y~g~~~~~~l~~fi~~~ 308 (445)
||+++|+ +|+ ...+.|..+.++|.+|+.++
T Consensus 80 Pt~~~~~-----~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 80 PTLLLFR-----GGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp SEEEEEE-----TTEEEEEECSCCSHHHHHHHHHHH
T ss_pred cEEEEEe-----CCcEEEeccCCcCHHHHHHHHHhc
Confidence 9999993 343 45689999999999999864
No 63
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.70 E-value=3.4e-17 Score=137.36 Aligned_cols=104 Identities=18% Similarity=0.356 Sum_probs=87.3
Q ss_pred CcccccChhhHHHHhhcCCcEEEEEEECCCCc--------------cCCC-hhHHHHHHHHhcCccEEEEEeCccchhhH
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLFFYSPSSN--------------RDGY-ESVIEEVANSMEGALKVGSINCETEASLC 263 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~--------------~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc 263 (445)
+.|.+|+.++|++.+.+++++++|.||++||+ +|+. .|.|+++++++.+.+.+++|||++++.++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 45899999999888888888999999999999 9999 99999999999878999999999999999
Q ss_pred hHhCCccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 264 KELGVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 264 ~~~~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
++|+|.++ ||+++| .+|+.+ .+.|..+.++|.+|+.+.+
T Consensus 83 ~~~~v~~~--Pt~~~~-----~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 83 PKYGIRGI--PTLLLF-----KNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGTCCBS--SEEEEE-----ESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHcCCCcc--CEEEEE-----ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999 999999 345444 5889989999999998754
No 64
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.70 E-value=2.4e-17 Score=137.08 Aligned_cols=107 Identities=15% Similarity=0.207 Sum_probs=95.4
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
.+.|.+|+.++|...+.+.++++||.||++||++|+. .|.|+++++++.+.+.++.|||++++.+|++++|.++ ||+
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~--Pt~ 88 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSI--PTL 88 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSS--SEE
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcC--CEE
Confidence 4568999999998888888889999999999999999 9999999999988899999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCCC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
++|+ +|+. ..+.|..+.+.|.+++.+.++.
T Consensus 89 ~~~~-----~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 89 ILFK-----DGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp EEEE-----TTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred EEEE-----CCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 9993 4544 4588998999999999887764
No 65
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.70 E-value=5.1e-17 Score=132.07 Aligned_cols=104 Identities=15% Similarity=0.200 Sum_probs=92.2
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
++.|..++.++|++.+ .++++++|.||++||++|+. .|.|+++++.+.+.+.++.|||++++.+|++++|.++ ||+
T Consensus 3 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~--Pt~ 79 (109)
T 3tco_A 3 EDVTLVLTEENFDEVI-RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNI--PTT 79 (109)
T ss_dssp CCCCEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSS--SEE
T ss_pred CCeEEEecHHHHHHHH-hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccC--CEE
Confidence 3458999999998765 55779999999999999999 9999999999988899999999999999999999999 999
Q ss_pred EEeccCCCCCCC-eeeecCcccHHHHHHHHHhhC
Q 013319 277 FAYSYKAGDKGS-LVEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 277 ~~f~~~~~~~g~-~~~y~g~~~~~~l~~fi~~~l 309 (445)
++| .+|+ ...+.|..+.++|.+++.+.+
T Consensus 80 ~~~-----~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 80 LIF-----VNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEE-----ETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEE-----cCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 999 3453 345889999999999998765
No 66
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.69 E-value=4.4e-17 Score=132.35 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=91.4
Q ss_pred cccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 200 NIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 200 ~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
.|.+|+.++|++ +.+.+++++|.||++||++|+. .|.++++++.+.+.+.++.|||++++.+|++++|.++ ||+++
T Consensus 2 ~v~~l~~~~~~~-~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--Pt~~~ 78 (109)
T 2yzu_A 2 KPIEVTDQNFDE-TLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSI--PTVIL 78 (109)
T ss_dssp CCEECCTTTHHH-HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSS--SEEEE
T ss_pred cceEccHhHHHH-HhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcC--CEEEE
Confidence 478999999984 5567789999999999999999 9999999999988899999999999999999999999 99999
Q ss_pred eccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 279 YSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 279 f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
| .+|+. ..+.|..+.++|.+|+.+.++
T Consensus 79 ~-----~~g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 79 F-----KDGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp E-----ETTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred E-----eCCcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 9 34544 358899899999999998876
No 67
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.69 E-value=4.6e-17 Score=142.34 Aligned_cols=105 Identities=14% Similarity=0.310 Sum_probs=93.7
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
+..+.+++.++|++.+ .+++++||.||++||++|+. .|.|+++++++.+.+.|++||+++++.++++|+|.++ ||+
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~--Pt~ 122 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGI--PAF 122 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSS--SEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcC--CEE
Confidence 3457899999998877 66779999999999999999 9999999999988899999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
++|+ +|+. ..+.|..+.++|.+|+.+.+.
T Consensus 123 ~~~~-----~G~~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 123 ILFH-----KGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp EEEE-----TTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEe-----CCeEEEEecCCCCHHHHHHHHHHHhc
Confidence 9993 4543 458899899999999998765
No 68
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.69 E-value=9.4e-17 Score=154.36 Aligned_cols=108 Identities=18% Similarity=0.403 Sum_probs=95.6
Q ss_pred CCcccccChhhHHHHhhcC-CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcE
Q 013319 198 SGNIRALNLQVFKKEIVEK-GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPR 275 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~-~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pt 275 (445)
.+.|.++|.++|++.+..+ +++++|.||+|||++|+. .|.|+++++++.+.+.|++|||++++.+|++|+|.++ ||
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~--Pt 83 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAI--PT 83 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSS--SE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCC--Ce
Confidence 3458999999998865433 679999999999999999 9999999999998899999999999999999999999 99
Q ss_pred EEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCCCC
Q 013319 276 IFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLPRF 312 (445)
Q Consensus 276 i~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp~~ 312 (445)
+++| .+|+.+ .+.|..+.+.+.+|+...+|..
T Consensus 84 ~~~~-----~~G~~~~~~~g~~~~~~l~~~l~~~lp~~ 116 (287)
T 3qou_A 84 VYLF-----QNGQPVDGFQGPQPEEAIRALLDXVLPRE 116 (287)
T ss_dssp EEEE-----ETTEEEEEEESCCCHHHHHHHHHHHSCCH
T ss_pred EEEE-----ECCEEEEEeeCCCCHHHHHHHHHHHcCCc
Confidence 9999 345444 5899999999999999998853
No 69
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.69 E-value=5.6e-17 Score=131.06 Aligned_cols=102 Identities=16% Similarity=0.292 Sum_probs=91.2
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEe
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f 279 (445)
|.+++.++|++.+.+++++++|.||++||++|+. .|.++++++++.+.+.++.||+++++.+|++++|.++ ||+++|
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--Pt~~~~ 79 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSI--PTVLFF 79 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSS--SEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcc--cEEEEE
Confidence 6789999998888777889999999999999999 9999999999988899999999999999999999999 999998
Q ss_pred ccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 280 SYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 280 ~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
+ +|+. ..+.|..+.+.|.+++.+.+
T Consensus 80 ~-----~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 80 K-----NGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp E-----TTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred e-----CCeEEEEEecCCCHHHHHHHHHhhC
Confidence 3 4544 35788888999999998753
No 70
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.68 E-value=4.5e-17 Score=131.85 Aligned_cols=101 Identities=16% Similarity=0.229 Sum_probs=89.3
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEe
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f 279 (445)
|.+|+.++|+ .+.+++++++|.||++||++|+. .|.|+++++.+.+.+.++.|||++++.+|++++|.++ ||+++|
T Consensus 2 v~~l~~~~~~-~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~--Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQ-QAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSI--PTLILF 78 (105)
T ss_dssp CEEECTTTHH-HHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSS--SEEEEE
T ss_pred ceeccHHhHH-HHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccc--cEEEEE
Confidence 6789999997 56677789999999999999999 9999999999988899999999999999999999999 999999
Q ss_pred ccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 280 SYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 280 ~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
+ +|+. ..+.|..+.++|.+++.+.+
T Consensus 79 ~-----~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 K-----GGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp E-----TTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred e-----CCeEEEEEecCCCHHHHHHHHHHHh
Confidence 3 4543 45889888899999987654
No 71
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=3.3e-17 Score=139.86 Aligned_cols=101 Identities=15% Similarity=0.251 Sum_probs=87.3
Q ss_pred CcccccChhhHHHHhhcCCc-EEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccchhhHhHhCCc------
Q 013319 199 GNIRALNLQVFKKEIVEKGM-TWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETEASLCKELGVH------ 269 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~-~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~~~lc~~~~I~------ 269 (445)
+.|.+++.++|++.+.+... ++||.||++||++|+. .|.|+++++++.+ .+.++.|||++++.+|++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcC
Confidence 45899999999988866654 8999999999999999 9999999999986 7999999999999999999999
Q ss_pred cCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHH
Q 013319 270 RPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCR 306 (445)
Q Consensus 270 ~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~ 306 (445)
++ ||+++| .+|+.+ .+.|..+.+.|.+|+.
T Consensus 87 ~~--Pt~~~~-----~~G~~~~~~~G~~~~~~l~~~l~ 117 (137)
T 2dj0_A 87 QL--PTLILF-----QGGKEAMRRPQIDKKGRAVSWTF 117 (137)
T ss_dssp CS--SEEEEE-----SSSSEEEEESCBCSSSCBCCCCC
T ss_pred CC--CEEEEE-----ECCEEEEEecCcCchHHHHHHHh
Confidence 99 999999 345544 5788877777766664
No 72
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.67 E-value=8.7e-17 Score=129.31 Aligned_cols=101 Identities=15% Similarity=0.223 Sum_probs=89.5
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEe
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f 279 (445)
|.+|+.++|++.+ .++++++|.||++||++|+. .|.++++++.+.+ +.++.|||+.++.+|++++|.++ ||+++|
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~--Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSL--PTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSS--CEEEEE
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCcccc--CEEEEE
Confidence 5678999998876 56779999999999999999 9999999999987 99999999999999999999999 999999
Q ss_pred ccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 280 SYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 280 ~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
.+|+. ..+.|..+.++|.+|+.+.++
T Consensus 77 -----~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 -----KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp -----ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred -----ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 34544 458899899999999988764
No 73
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.67 E-value=1.4e-16 Score=137.71 Aligned_cols=105 Identities=16% Similarity=0.336 Sum_probs=94.2
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
+..|.+++.++|++.+ ..++++||.||++||++|+. .|.|+++++++.+.+.|+.||+++++.++++|+|.++ ||+
T Consensus 37 ~~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~--Pt~ 113 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSI--PTI 113 (148)
T ss_dssp CCCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSS--SEE
T ss_pred cCCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCcc--CEE
Confidence 4568999999998766 77789999999999999999 9999999999988899999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
++|. +|+. ..+.|..+.++|.+|+.+.+.
T Consensus 114 ~~~~-----~G~~~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 114 MLYR-----NGKMIDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp EEEE-----TTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred EEEE-----CCeEEEEEeCCCCHHHHHHHHHHHhc
Confidence 9993 4544 458999999999999998764
No 74
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=2.4e-17 Score=130.16 Aligned_cols=62 Identities=32% Similarity=0.503 Sum_probs=58.8
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHH
Q 013319 28 KTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRK 89 (445)
Q Consensus 28 ~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~ 89 (445)
...|||+||||+++++.++||+|||++++++|||+++.+.+.++|++|++||++|+||.+|+
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCccccc
Confidence 36899999999999999999999999999999999998889999999999999999998765
No 75
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.66 E-value=2.3e-16 Score=129.21 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=88.2
Q ss_pred CCcccccChhhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc-cchhhHhHhCCccCCCc
Q 013319 198 SGNIRALNLQVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE-TEASLCKELGVHRPRSP 274 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~-~~~~lc~~~~I~~~~~P 274 (445)
.+.|.+|+.++|++.+.+ .+++++|.||++||++|+. .|.|+++++.+.+ +.++.|||+ .+..++++|+|.++ |
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~v~~~--P 80 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVV--P 80 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSBS--S
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHHHHHHcCCCee--e
Confidence 456899999999887765 5679999999999999999 9999999999875 999999998 78999999999999 9
Q ss_pred EEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 275 RIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 275 ti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
|++++ .+|+.+ .+.|. +.++|.+++.+.+
T Consensus 81 t~~~~-----~~G~~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 81 TFKIL-----KENSVVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp EEEEE-----SSSSEEEEEESS-CHHHHHHHHHHHH
T ss_pred EEEEE-----eCCcEEEEEcCC-CHHHHHHHHHHhh
Confidence 99888 455544 46776 4888999987653
No 76
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.66 E-value=1.7e-16 Score=147.11 Aligned_cols=107 Identities=19% Similarity=0.350 Sum_probs=97.0
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
...+..||.++|++.++++++++||.||++||++|+. .|.|+++++++++.+.++.|||+.++.+|++|+|.++ ||+
T Consensus 11 ~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~--Pt~ 88 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGI--PTL 88 (222)
T ss_dssp SCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSB--SEE
T ss_pred CCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcC--CEE
Confidence 3458999999999888888889999999999999999 9999999999998899999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCCC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
++|+ +|+. ..+.|..+.+.|.+|+.+.++.
T Consensus 89 ~~~~-----~G~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (222)
T 3dxb_A 89 LLFK-----NGEVAATKVGALSKGQLKEFLDANLAG 119 (222)
T ss_dssp EEEE-----TTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred EEEE-----CCeEEEEeccccChHHHHHHHHhhccc
Confidence 9993 4544 4688999999999999998874
No 77
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.65 E-value=2.3e-16 Score=132.69 Aligned_cols=100 Identities=12% Similarity=0.202 Sum_probs=87.5
Q ss_pred ccccCh-hhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 201 IRALNL-QVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 201 V~~Lt~-~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
|.+|+. ++|++.+ ..++++||.||++||++|+. .|.|+++++++. .+.|+.|||++++.+|++|+|.++ ||+++
T Consensus 21 v~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~--Pt~~i 96 (125)
T 1r26_A 21 VVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQL--PTFII 96 (125)
T ss_dssp CEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSS--SEEEE
T ss_pred eEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcc--cEEEE
Confidence 788988 9998866 67779999999999999999 999999999984 599999999999999999999999 99999
Q ss_pred eccCCCCCCCee-eecCcccHHHHHHHHHhhCC
Q 013319 279 YSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 279 f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp 310 (445)
| .+|+.+ .+.| .+.++|.++|.+.++
T Consensus 97 ~-----~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 97 A-----RSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp E-----ETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred E-----eCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 9 345443 4778 588999999987654
No 78
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.65 E-value=3.7e-16 Score=126.41 Aligned_cols=101 Identities=12% Similarity=0.202 Sum_probs=87.1
Q ss_pred ccccCh-hhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 201 IRALNL-QVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 201 V~~Lt~-~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
|.+|+. ++|++.+.+ ++++++|.||++||++|+. .|.++++++.+++.+.++.||+++++.+|++++|.++ ||++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--Pt~~ 79 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSM--PTFV 79 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSS--SEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcc--cEEE
Confidence 466776 889887765 6779999999999999999 9999999999977899999999999999999999999 9999
Q ss_pred EeccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 278 AYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 278 ~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
+|+ +|+. ..+.| .+.++|.+++.+.+
T Consensus 80 ~~~-----~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 80 FLK-----NGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEE-----TTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred EEc-----CCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 993 4543 45778 68889999998753
No 79
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.65 E-value=3.2e-16 Score=130.52 Aligned_cols=103 Identities=12% Similarity=0.145 Sum_probs=90.6
Q ss_pred CcccccChhhHHHHhhc---CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCc
Q 013319 199 GNIRALNLQVFKKEIVE---KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSP 274 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~---~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~P 274 (445)
..+..++.++|++.+.+ .+++++|.||++||++|+. .|.|+++++++.+ +.++.|||++++.+|++|+|.++ |
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~--P 89 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAM--P 89 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSS--S
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcc--c
Confidence 44677899999988876 6789999999999999999 9999999999877 99999999999999999999999 9
Q ss_pred EEEEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 275 RIFAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 275 ti~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
|+++| .+|+. ..+.|.. .++|.+|+.+.++
T Consensus 90 t~~~~-----~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 90 TFLFM-----KEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp EEEEE-----ETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred EEEEE-----eCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 99999 34544 4588887 8999999988765
No 80
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.65 E-value=2.9e-16 Score=128.54 Aligned_cols=103 Identities=13% Similarity=0.243 Sum_probs=88.8
Q ss_pred ccccc-ChhhHHHHhhc-C--CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCc
Q 013319 200 NIRAL-NLQVFKKEIVE-K--GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSP 274 (445)
Q Consensus 200 ~V~~L-t~~~f~~~v~~-~--~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~P 274 (445)
.|.++ +.++|++.+.. . +++++|.||++||++|+. .|.|+++++++.+.+.++.|||++++.+|++|+|.++ |
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~--P 80 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAM--P 80 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBS--S
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcc--c
Confidence 37777 67889887764 2 678999999999999999 9999999999987899999999999999999999999 9
Q ss_pred EEEEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 275 RIFAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 275 ti~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
|+++|+ +|+. ..+.|. +.++|.+++.+.+.
T Consensus 81 t~~~~~-----~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 81 TFHVYK-----DGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEEEE-----TTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred EEEEEE-----CCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 999983 4543 357887 88999999987654
No 81
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.64 E-value=6.9e-16 Score=144.65 Aligned_cols=104 Identities=20% Similarity=0.288 Sum_probs=90.7
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEE--CCCCccCCChhHHHHHHHHhc---CccEEEEEeCcc-----chhhHhHhC
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFY--SPSSNRDGYESVIEEVANSME---GALKVGSINCET-----EASLCKELG 267 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fy--ap~C~~C~~~p~~~~~a~~l~---~~v~~~~Vdc~~-----~~~lc~~~~ 267 (445)
.+.|..||.++|++ +++++.+|||.|| ||||+ ..|+|+++|+.+. +.|.|++|||++ ++.+|++|+
T Consensus 15 ~~~v~~Lt~~nF~~-vi~~~~~vlV~Fy~~ApWCg---l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 15 CTGCVDLDELSFEK-TVERFPYSVVKFDIASPYGE---KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CTTCEECCTTTHHH-HHTTSSEEEEEEEESSCCSH---HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CCCcEECCHHHHHH-HHhcCCCEEEEEECCCCCCc---cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 45589999999988 5677789999999 99998 7999999999995 479999999999 899999999
Q ss_pred Cc--cCCCcEEEEeccCCCCCCCeeee--cCcccHHHHHHHHHhhCC
Q 013319 268 VH--RPRSPRIFAYSYKAGDKGSLVEY--NEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 268 I~--~~~~Pti~~f~~~~~~~g~~~~y--~g~~~~~~l~~fi~~~lp 310 (445)
|+ +| |||++|+ +.. ..+..| .|.++.++|++||.+++.
T Consensus 91 V~~~~~--PTl~~F~-G~~--~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 91 VDDKNF--PSIFLFK-GNA--DEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp CCTTSC--CEEEEES-SSS--SSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CCcCCC--CeEEEEe-CCc--CcceeecccCCCCHHHHHHHHHHhhc
Confidence 99 99 9999995 320 136789 999999999999998865
No 82
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.64 E-value=6.3e-16 Score=126.50 Aligned_cols=99 Identities=9% Similarity=0.132 Sum_probs=84.7
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEe
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f 279 (445)
....+.++|++. +.+++++||.||++||++|+. .|.|+++++++.+ +.++.||+++++.++++++|.++ ||+++|
T Consensus 9 ~~~~~~~~f~~~-~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~--Pt~~~~ 84 (109)
T 3f3q_A 9 TQFKTASEFDSA-IAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAM--PTLLLF 84 (109)
T ss_dssp EECCSHHHHHHH-TTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSS--SEEEEE
T ss_pred cCCCCHHHHHHH-HhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCcc--CEEEEE
Confidence 456688999765 456789999999999999999 9999999999865 99999999999999999999999 999999
Q ss_pred ccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 280 SYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 280 ~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
. +|+. ..+.|. +.++|.+++.+.+
T Consensus 85 ~-----~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 85 K-----NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp E-----TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred E-----CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 3 4544 447777 6789999998753
No 83
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.64 E-value=3.2e-16 Score=134.13 Aligned_cols=104 Identities=20% Similarity=0.311 Sum_probs=79.0
Q ss_pred CcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
+.|.+|+.++|...+.+.+. +||.||++||++|+. .|.|+++++++.+.+.|+.||++++..+|++|+|.++ ||++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~--Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSV--PTLV 109 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSS--SEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCcc--CEEE
Confidence 55889999999888777666 999999999999999 9999999999987899999999999999999999999 9999
Q ss_pred EeccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 278 AYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 278 ~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
+| .+|+. ..+.|..+.+.|.+|+.+.+.
T Consensus 110 ~~-----~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 110 LF-----RRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EE-----ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EE-----eCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 99 34544 458899899999999987764
No 84
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.64 E-value=1.3e-16 Score=139.27 Aligned_cols=69 Identities=36% Similarity=0.706 Sum_probs=63.2
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCh-------HHHHHHHHHHHHHHHcCCHHHHHHhhhcC
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNK-------AAQEKFAEINNAYDILSDEEKRKNYDLYG 95 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~-------~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g 95 (445)
....|||+||||+++++.++||+|||++++++|||+++.. .+.++|++|++||++|+||.+|+.||..+
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 4568999999999999999999999999999999998753 36789999999999999999999999764
No 85
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.63 E-value=1.3e-16 Score=129.51 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=72.9
Q ss_pred ChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEeccCC
Q 013319 205 NLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAYSYKA 283 (445)
Q Consensus 205 t~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f~~~~ 283 (445)
+.++|++.+ +++++++|.||++||++|+. .|.|+++++++ +.+.++.||+++++.+|++|+|.++ ||+++|
T Consensus 7 ~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~~~~l~~~~~v~~~--Pt~~~~---- 78 (105)
T 4euy_A 7 TIEELATYI-EEQQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQDMQEIAGRYAVFTG--PTVLLF---- 78 (105)
T ss_dssp ---CCSSST-TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECCC---------CCC--CEEEEE----
T ss_pred CHHHHHHHH-hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCCCHHHHHhcCCCCC--CEEEEE----
Confidence 456786654 66789999999999999999 99999999998 4799999999999999999999999 999999
Q ss_pred CCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 284 GDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 284 ~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
.+|+. ..+.|..+.++|.+++.+.+
T Consensus 79 -~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 79 -YNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp -ETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred -eCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 34544 45789889999999998764
No 86
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.63 E-value=5.5e-16 Score=126.06 Aligned_cols=100 Identities=10% Similarity=0.105 Sum_probs=83.9
Q ss_pred cccc-ChhhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 201 IRAL-NLQVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 201 V~~L-t~~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
|.++ +.++|++.+.+ ++++++|.||++||++|+. .|.|+++++++ +.+.++.||+++++.+|++|+|.++ ||++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~--Pt~~ 79 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQGTAATNNISAT--PTFQ 79 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHHHHHHTTCCSS--SEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCHHHHHhcCCCcc--cEEE
Confidence 5556 67889887764 6779999999999999999 99999999998 5699999999999999999999999 9999
Q ss_pred EeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 278 AYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 278 ~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
+| .+|+.+ .+.|. ..++|.+|+.+.+
T Consensus 80 ~~-----~~G~~~~~~~G~-~~~~l~~~l~~~l 106 (107)
T 1gh2_A 80 FF-----RNKVRIDQYQGA-DAVGLEEKIKQHL 106 (107)
T ss_dssp EE-----ETTEEEEEEESS-CHHHHHHHHHHHH
T ss_pred EE-----ECCeEEEEEeCC-CHHHHHHHHHHhc
Confidence 99 345433 47785 4556999998754
No 87
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.63 E-value=5.8e-16 Score=127.96 Aligned_cols=100 Identities=12% Similarity=0.150 Sum_probs=83.9
Q ss_pred CcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
..+.+++..++.+.++++++++||.||++||++|+. .|.|+++++++.+ +.++.|||++++.++++++|.++ ||++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~--Pt~~ 88 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAM--PTFV 88 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSB--SEEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcc--cEEE
Confidence 346677655544556677789999999999999999 9999999999877 99999999999999999999999 9999
Q ss_pred EeccCCCCCCCe-eeecCcccHHHHHHHHHh
Q 013319 278 AYSYKAGDKGSL-VEYNEHLVAKNLKSFCRD 307 (445)
Q Consensus 278 ~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~ 307 (445)
+| .+|+. ..+.|.. .+.|.+++.+
T Consensus 89 ~~-----~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LG-----KDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EE-----ETTEEEEEEESSC-HHHHHHHHHT
T ss_pred EE-----eCCeEEEEEeCCC-HHHHHHHHHh
Confidence 98 34544 3578887 8899998864
No 88
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.63 E-value=8.1e-16 Score=126.30 Aligned_cols=102 Identities=11% Similarity=0.084 Sum_probs=88.3
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
.+....++.++|++.+ +.+++++|.||++||++|+. .|.++++++++. .+.++.||+++++.++++++|.++ ||+
T Consensus 8 ~~~~~~~~~~~f~~~~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~--Pt~ 83 (112)
T 1syr_A 8 HMVKIVTSQAEFDSII-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSM--PTF 83 (112)
T ss_dssp -CCEEECSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTHHHHHHTTCCSS--SEE
T ss_pred eeEEEECCHHHHHHHH-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCHHHHHHcCCCcc--cEE
Confidence 4556889999998866 56779999999999999999 999999999986 499999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
++|+ +|+. ..+.|. +.++|.+++.+.+
T Consensus 84 ~~~~-----~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYK-----NGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEE-----TTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEE-----CCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 9983 4543 357888 8999999998765
No 89
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.62 E-value=1.3e-15 Score=127.84 Aligned_cols=102 Identities=11% Similarity=0.230 Sum_probs=87.7
Q ss_pred Cccccc-ChhhHHHHhhc---CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCC
Q 013319 199 GNIRAL-NLQVFKKEIVE---KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRS 273 (445)
Q Consensus 199 ~~V~~L-t~~~f~~~v~~---~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~ 273 (445)
..|.+| +.++|++.+.. +++++||.||++||++|+. .|.|+++++++. .+.++.||+++++.+|++|+|.++
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~-- 92 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAM-- 92 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSS--
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCcc--
Confidence 347888 77889887765 5779999999999999999 999999999986 699999999999999999999999
Q ss_pred cEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 274 PRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 274 Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
||+++| .+|+.+ .+.| .+.++|.+++.+.+
T Consensus 93 Pt~~~~-----~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFL-----KEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SEEEEE-----ETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred CEEEEE-----ECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 999998 345444 4677 48899999998765
No 90
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.62 E-value=8.2e-16 Score=126.04 Aligned_cols=102 Identities=16% Similarity=0.221 Sum_probs=83.1
Q ss_pred ccccCh-hhHHHHhhc--CCcEEEEEEECCCCccCCC-hhHHHHHHHHhc-CccEEEEEeCccchhhHhHhCCccCCCcE
Q 013319 201 IRALNL-QVFKKEIVE--KGMTWLLFFYSPSSNRDGY-ESVIEEVANSME-GALKVGSINCETEASLCKELGVHRPRSPR 275 (445)
Q Consensus 201 V~~Lt~-~~f~~~v~~--~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~-~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pt 275 (445)
|.+|+. ++|++.+.. .+++++|.||++||++|+. .|.|++++++++ +.+.++.|||++++.++++++|.++ ||
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~--Pt 79 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAV--PY 79 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSS--SE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcc--cE
Confidence 677876 899876652 3678999999999999999 999999999963 4699999999999999999999999 99
Q ss_pred EEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCC
Q 013319 276 IFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 276 i~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp 310 (445)
+++| .+|+.+ .+.|. ..++|.+++.+.++
T Consensus 80 ~~~~-----~~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 80 FIII-----HKGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEE-----ETTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred EEEE-----ECCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 9999 345444 47776 45569999987653
No 91
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.62 E-value=5.8e-16 Score=134.39 Aligned_cols=99 Identities=6% Similarity=0.084 Sum_probs=86.7
Q ss_pred cChhhHHHHhh-cCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEecc
Q 013319 204 LNLQVFKKEIV-EKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAYSY 281 (445)
Q Consensus 204 Lt~~~f~~~v~-~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f~~ 281 (445)
.+.++|++.+. ..++++||.|||+||++|+. .|.++++++++.+.+.++.||+++++.++++|+|.++ ||+++|+
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~--Pt~~~~~- 85 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYI--PSTVFFF- 85 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSS--SEEEEEE-
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCcc--CeEEEEE-
Confidence 36788988877 56789999999999999999 9999999999988899999999999999999999999 9999883
Q ss_pred CCCCCCCee----------eecC-cccHHHHHHHHHhhC
Q 013319 282 KAGDKGSLV----------EYNE-HLVAKNLKSFCRDHL 309 (445)
Q Consensus 282 ~~~~~g~~~----------~y~g-~~~~~~l~~fi~~~l 309 (445)
+|+.+ .+.| ..+.++|.+++...+
T Consensus 86 ----~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 86 ----NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp ----TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred ----CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 45444 5778 778899999988654
No 92
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.62 E-value=1.4e-15 Score=141.91 Aligned_cols=106 Identities=16% Similarity=0.248 Sum_probs=94.3
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCc---cEEEEEeCccchhhHhHhCCccCCC
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGA---LKVGSINCETEASLCKELGVHRPRS 273 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~---v~~~~Vdc~~~~~lc~~~~I~~~~~ 273 (445)
...+..++.++|++.+ ..+++++|.||++||++|+. .|.|+++++.+.+. +.++.|||++++.+|++|+|.++
T Consensus 129 ~~~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~-- 205 (241)
T 3idv_A 129 PEVTLVLTKENFDEVV-NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGY-- 205 (241)
T ss_dssp CCSSEECCTTTHHHHH-HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSS--
T ss_pred cccceeccHHHHHHhh-ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCccc--
Confidence 3457889999998765 55668999999999999999 99999999999764 99999999999999999999999
Q ss_pred cEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCCC
Q 013319 274 PRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 274 Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
||+++| .+|+.+.|.|.++.++|.+|+.+.+.+
T Consensus 206 Pt~~~~-----~~g~~~~~~g~~~~~~l~~~l~~~~~~ 238 (241)
T 3idv_A 206 PTLKIF-----RKGRPYDYNGPREKYGIVDYMIEQSGA 238 (241)
T ss_dssp SEEEEE-----ETTEEEECCSCCSHHHHHHHHHHHTTC
T ss_pred CEEEEE-----ECCeEEEecCCCCHHHHHHHHHhhhCC
Confidence 999999 456678899999999999999987754
No 93
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.62 E-value=6.7e-16 Score=127.75 Aligned_cols=99 Identities=8% Similarity=0.148 Sum_probs=85.6
Q ss_pred ccccCh-hhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 201 IRALNL-QVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 201 V~~Lt~-~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
|.+++. ++|++.+.+ .+++++|.||++||++|+. .|.|+++++++ .+.++.||+++++.+|++++|.++ ||++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~--Pt~~ 90 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAM--PTFI 90 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSS--SEEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCcc--ceEE
Confidence 778887 899887765 6679999999999999999 99999999988 799999999999999999999999 9999
Q ss_pred EeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 278 AYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 278 ~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
+|+ +|+.+ .+.| .+.++|.+++.+.+
T Consensus 91 ~~~-----~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 91 AIK-----NGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEE-----TTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEe-----CCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 993 45443 4777 57889999998754
No 94
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.62 E-value=2.8e-17 Score=134.86 Aligned_cols=65 Identities=31% Similarity=0.530 Sum_probs=60.8
Q ss_pred CcCcccccCCCCCCCH--HHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCC
Q 013319 29 TVDLYKVLGVERNASQ--REIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGD 96 (445)
Q Consensus 29 ~~d~y~vLgv~~~a~~--~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 96 (445)
..++|+||||+++|+. ++||+|||+|++++|||+++. .++|++|++||++|+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4789999999999998 999999999999999999876 5799999999999999999999998764
No 95
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.61 E-value=1.3e-15 Score=127.23 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=87.6
Q ss_pred CCcccccChhhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc-cchhhHhHhCCccCCCc
Q 013319 198 SGNIRALNLQVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE-TEASLCKELGVHRPRSP 274 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~-~~~~lc~~~~I~~~~~P 274 (445)
.+.|.+++.++|++.+.. ++++++|.||++||++|+. .|.++++++++.+ +.++.|||+ +++.+|++++|.++ |
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~v~~~--P 93 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVV--P 93 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSSS--S
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHHHHHHcCCCee--e
Confidence 345899999999887765 5679999999999999999 9999999999874 899999998 68999999999999 9
Q ss_pred EEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 275 RIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 275 ti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
|++++ .+|+.+ .+.|.. .++|.+++.+.+
T Consensus 94 t~~~~-----~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKIL-----KENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEEE-----ETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred EEEEE-----eCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 99998 345443 467774 889999998754
No 96
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.61 E-value=5.5e-17 Score=142.14 Aligned_cols=66 Identities=30% Similarity=0.524 Sum_probs=58.7
Q ss_pred CCcCcccccCCCCCCC--HHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCC
Q 013319 28 KTVDLYKVLGVERNAS--QREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGD 96 (445)
Q Consensus 28 ~~~d~y~vLgv~~~a~--~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 96 (445)
...|+|+||||+++|+ .++||+|||++++++|||++++ +++|++|++||++|+||.+|+.||++|.
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 3479999999999998 6999999999999999999876 4789999999999999999999999985
No 97
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.61 E-value=3.3e-16 Score=120.25 Aligned_cols=65 Identities=23% Similarity=0.351 Sum_probs=58.3
Q ss_pred CcCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhcCCC
Q 013319 29 TVDLYKVLGVERN--ASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLYGDE 97 (445)
Q Consensus 29 ~~d~y~vLgv~~~--a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 97 (445)
..++|+||||+++ ++.++||+|||++++++|||++.+ .++|++|++||++|+|+.+|.. +.||.+
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~-~~~g~~ 76 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLR-MNLGGT 76 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHT-TCCSSC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhHHHHHH-HhcCCc
Confidence 4689999999999 999999999999999999999865 5799999999999999999988 445543
No 98
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.61 E-value=1.8e-15 Score=122.19 Aligned_cols=99 Identities=9% Similarity=0.151 Sum_probs=84.5
Q ss_pred ccc-ChhhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 202 RAL-NLQVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 202 ~~L-t~~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
.++ +.++|++.+.. ++++++|.||++||++|+. .|.|+++++++.+ +.++.||+++++.+|++++|.++ ||+++
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~--Pt~~~ 79 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSM--PTFQF 79 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBS--SEEEE
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcC--cEEEE
Confidence 344 56788776653 4679999999999999999 9999999999876 99999999999999999999999 99999
Q ss_pred eccCCCCCCCe-eeecCcccHHHHHHHHHhhC
Q 013319 279 YSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 279 f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~l 309 (445)
|. +|+. ..+.|. +.++|.+++.+.+
T Consensus 80 ~~-----~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 80 FK-----KGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EE-----TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EE-----CCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 93 4443 457888 8999999998764
No 99
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.60 E-value=5.9e-16 Score=131.86 Aligned_cols=102 Identities=11% Similarity=0.108 Sum_probs=88.6
Q ss_pred CCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC---------ccchhhHhHhC
Q 013319 198 SGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC---------ETEASLCKELG 267 (445)
Q Consensus 198 ~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc---------~~~~~lc~~~~ 267 (445)
++.|.+++.++|++.+.. +++|.||++||++|+. .|.|++++++++ +.|+.||| ++++.+|++|+
T Consensus 15 ~~~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAG 89 (135)
T ss_dssp TTEEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHT
T ss_pred cCceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcC
Confidence 345899999999887644 8999999999999999 999999999986 99999999 88899999999
Q ss_pred CccCCCcEEEEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCCC
Q 013319 268 VHRPRSPRIFAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 268 I~~~~~Pti~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
|.++ ||+++|. +|+. ..+.|..+.+.+.+++++.+.+
T Consensus 90 v~~~--Pt~~~~~-----~G~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 90 VEGT--PTLVFYK-----EGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp CCSS--SEEEEEE-----TTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred Ccee--CeEEEEc-----CCEEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 9999 9999993 4544 4588999999999999988865
No 100
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.60 E-value=7.4e-16 Score=129.82 Aligned_cols=90 Identities=11% Similarity=0.259 Sum_probs=80.4
Q ss_pred HHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEeccCCCCCCC-
Q 013319 211 KEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAYSYKAGDKGS- 288 (445)
Q Consensus 211 ~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~- 288 (445)
+.+..++++++|.||++||++|+. .|.++++++++++.+.++.|||++++.+|++|+|.++ ||+++|+ +|+
T Consensus 36 ~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~--Pt~~~~~-----~G~~ 108 (128)
T 3ul3_B 36 NGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSL--PTIILLK-----NKTM 108 (128)
T ss_dssp SBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSS--SEEEEEE-----TTEE
T ss_pred HHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCc--CEEEEEE-----CCEE
Confidence 445667789999999999999999 9999999999988899999999999999999999999 9999993 444
Q ss_pred eeeecCcccHHHHHHHHHh
Q 013319 289 LVEYNEHLVAKNLKSFCRD 307 (445)
Q Consensus 289 ~~~y~g~~~~~~l~~fi~~ 307 (445)
...+.|.++.++|.+|+.+
T Consensus 109 ~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 109 LARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEESSCCCHHHHHHHHTT
T ss_pred EEEecCCCCHHHHHHHHHh
Confidence 4458899999999999865
No 101
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.60 E-value=1.6e-15 Score=126.06 Aligned_cols=107 Identities=10% Similarity=0.129 Sum_probs=87.9
Q ss_pred ccccc--ChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 200 NIRAL--NLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 200 ~V~~L--t~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
.|.++ +.++|++.+.++++++||.||++||++|+. .|.|+++++++ +.+.++.|||++++.+|++|+|.++ ||+
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~--Pt~ 80 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSI--PAL 80 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSS--SEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCC--CEE
Confidence 46777 688998777777889999999999999999 99999999998 7899999999999999999999999 999
Q ss_pred EEeccCCCCCCCee-eecCcccHHHHHHHHHhhCCC
Q 013319 277 FAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 277 ~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp~ 311 (445)
++|..+. .+|+.+ .+.|.. .++|.+.+.++.+.
T Consensus 81 ~~~~~~~-~~G~~~~~~~G~~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 81 FFVKKEG-NEIKTLDQFVGAD-VSRIKADIEKFKHH 114 (118)
T ss_dssp EEEEEET-TEEEEEEEEESCC-HHHHHHHHHHHC--
T ss_pred EEEeCCC-CcceEEEeecCCC-HHHHHHHHHHhhhc
Confidence 9994311 124443 477764 46699999887764
No 102
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.60 E-value=2.2e-15 Score=121.35 Aligned_cols=99 Identities=16% Similarity=0.239 Sum_probs=84.1
Q ss_pred cccCh-hhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 202 RALNL-QVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 202 ~~Lt~-~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
.+++. ++|++.+.+ .+++++|.||++||++|+. .|.++++++.+. .+.++.||+++++.+|++++|.++ ||+++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~--Pt~~~ 78 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAM--PTFVF 78 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSS--SEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccc--cEEEE
Confidence 45655 889887654 5679999999999999999 999999999986 699999999999999999999999 99999
Q ss_pred eccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 279 YSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 279 f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
|. +|+.+ .+.| .+.++|.+|+.+.+
T Consensus 79 ~~-----~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 79 IK-----DGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EE-----TTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred Ee-----CCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 93 45443 4777 58899999998753
No 103
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.38 E-value=8.1e-17 Score=129.95 Aligned_cols=101 Identities=20% Similarity=0.355 Sum_probs=89.8
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEe
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f 279 (445)
|.+|+.++|.+.+.+++++++|.||++||++|+. .|.++++++++.+.+.++.|||+++..+|++++|.++ ||+++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--Pt~~~~ 80 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSI--PTLLLF 80 (106)
Confidence 7889999998888788889999999999999999 9999999999987899999999999999999999999 999999
Q ss_pred ccCCCCCCC-eeeecCcccHHHHHHHHHhh
Q 013319 280 SYKAGDKGS-LVEYNEHLVAKNLKSFCRDH 308 (445)
Q Consensus 280 ~~~~~~~g~-~~~y~g~~~~~~l~~fi~~~ 308 (445)
+ +|+ ...+.|..+.++|.+++.+.
T Consensus 81 ~-----~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 81 K-----NGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 3 343 34578888889999988764
No 104
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.59 E-value=2.8e-15 Score=125.03 Aligned_cols=102 Identities=12% Similarity=0.255 Sum_probs=86.9
Q ss_pred cccccC-hhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCc-cEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 200 NIRALN-LQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGA-LKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 200 ~V~~Lt-~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~-v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
.+..++ .++|++.+ ..+++++|.||++||++|+. .|.|+++++++.+. +.++.||+++++.+|++|+|.++ ||+
T Consensus 16 ~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~--Pt~ 92 (121)
T 2j23_A 16 SVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAM--PTF 92 (121)
T ss_dssp CEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSS--SEE
T ss_pred ceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcc--cEE
Confidence 356664 58897765 67779999999999999999 99999999998775 99999999999999999999999 999
Q ss_pred EEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 277 FAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 277 ~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
++|+ +|+. ..+.|. +.++|.+||.+.++
T Consensus 93 ~~~~-----~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 93 VFFK-----NGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp EEEE-----TTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred EEEE-----CCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 9993 4543 457887 88999999987653
No 105
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.59 E-value=1.7e-15 Score=130.36 Aligned_cols=102 Identities=9% Similarity=0.053 Sum_probs=84.5
Q ss_pred ccc-ChhhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 202 RAL-NLQVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 202 ~~L-t~~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
..+ +.++|+..+.+ ++++++|.|||+||++|+. .|.++++++++.+.+.++.||+++++.+|++|+|.++ ||+++
T Consensus 6 ~~i~~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~--Pt~~~ 83 (142)
T 1qgv_A 6 PHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP--CTVMF 83 (142)
T ss_dssp CBCCSHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSS--CEEEE
T ss_pred hccCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCC--CEEEE
Confidence 344 57889877776 6789999999999999999 9999999999988899999999999999999999999 99999
Q ss_pred eccCCCCCCCeee----------ecCccc-HHHHHHHHHhhCC
Q 013319 279 YSYKAGDKGSLVE----------YNEHLV-AKNLKSFCRDHLP 310 (445)
Q Consensus 279 f~~~~~~~g~~~~----------y~g~~~-~~~l~~fi~~~lp 310 (445)
|. +|+.+. ..|... .++|.+++.+.+.
T Consensus 84 ~~-----~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 84 FF-----RNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp EE-----TTEEEEEECC------CCSCCSCHHHHHHHHHHHHH
T ss_pred EE-----CCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHH
Confidence 93 344332 445443 6788888876543
No 106
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.59 E-value=2.8e-15 Score=130.50 Aligned_cols=104 Identities=12% Similarity=0.240 Sum_probs=88.2
Q ss_pred CcccccC-hhhHHHHhhcC-CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcE
Q 013319 199 GNIRALN-LQVFKKEIVEK-GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPR 275 (445)
Q Consensus 199 ~~V~~Lt-~~~f~~~v~~~-~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pt 275 (445)
..|.+++ .++|++.+.+. ++++||.||++||++|+. .|.|+++++++ +.+.|+.|||++++.+|++|+|.++ ||
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~~~~l~~~~~v~~~--Pt 88 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGVPEVSEKYEISSV--PT 88 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHHHHHHTTCCSS--SE
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCCCHHHHHHcCCCCC--CE
Confidence 4478886 68898766543 678999999999999999 99999999997 4699999999999999999999999 99
Q ss_pred EEEeccCCCCCCCeee-ecCcccHHHHHHHHHhhCCC
Q 013319 276 IFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 276 i~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~lp~ 311 (445)
+++|. +|+.+. +.| .+.++|.++|.+.++.
T Consensus 89 ~~~~~-----~G~~~~~~~G-~~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 89 FLFFK-----NSQKIDRLDG-AHAPELTKKVQRHASS 119 (153)
T ss_dssp EEEEE-----TTEEEEEEES-SCHHHHHHHHHHHSCT
T ss_pred EEEEE-----CCEEEEEEeC-CCHHHHHHHHHHHhcc
Confidence 99993 455544 666 4778899999998875
No 107
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.59 E-value=2e-15 Score=125.47 Aligned_cols=96 Identities=14% Similarity=0.155 Sum_probs=81.0
Q ss_pred ccccChhhHHHHhhcCCc--EEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 201 IRALNLQVFKKEIVEKGM--TWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~--~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
|.++|.++|.+.|.+.+. +++|.||||||++|+. .|.++++|+++. .++|++||+++. +.+|+|+++ ||++
T Consensus 5 v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~---~~~~~v~~~--PT~~ 78 (118)
T 3evi_A 5 LREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC---IQHYHDNCL--PTIF 78 (118)
T ss_dssp CEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT---STTCCGGGC--SEEE
T ss_pred eEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh---HHHCCCCCC--CEEE
Confidence 788999999998877665 8999999999999999 999999999985 599999999985 589999999 9999
Q ss_pred EeccCCCCCCCeee-ecCc-------ccHHHHHHHHHh
Q 013319 278 AYSYKAGDKGSLVE-YNEH-------LVAKNLKSFCRD 307 (445)
Q Consensus 278 ~f~~~~~~~g~~~~-y~g~-------~~~~~l~~fi~~ 307 (445)
+| ++|+.+. +.|. .+.++|..++.+
T Consensus 79 ~f-----k~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 79 VY-----KNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EE-----ETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred EE-----ECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 99 4554433 4443 367888888875
No 108
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.59 E-value=2.5e-15 Score=123.13 Aligned_cols=101 Identities=16% Similarity=0.233 Sum_probs=85.2
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEe
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f 279 (445)
+..++.++| +.+ .++++++|.||++||++|+. .|.|+++++.+. .+.++.||+++++.++++++|.++ ||+++|
T Consensus 5 ~~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~--Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERV--PTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSS--CEEEEE
T ss_pred eecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCccc--CEEEEE
Confidence 567788999 555 45578999999999999999 999999999875 689999999999999999999999 999999
Q ss_pred ccCCCCCCCe-eeecCcccHHHHHHHHHhhCCC
Q 013319 280 SYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 280 ~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
.+|+. ..+.|..+.++|.+++....++
T Consensus 80 -----~~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 -----RDGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp -----ESSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred -----ECCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 34544 4588988999999999987664
No 109
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.59 E-value=2.4e-15 Score=126.12 Aligned_cols=106 Identities=13% Similarity=0.177 Sum_probs=89.5
Q ss_pred cccccChhhHH----HHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEe--CccchhhHhHhCCccCC
Q 013319 200 NIRALNLQVFK----KEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSIN--CETEASLCKELGVHRPR 272 (445)
Q Consensus 200 ~V~~Lt~~~f~----~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vd--c~~~~~lc~~~~I~~~~ 272 (445)
.+.+++.++|+ ......++++||.||++||++|+. .|.++++++++.+.+.++.|| ++++..++++|+|.++
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~- 83 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIV- 83 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSS-
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcce-
Confidence 35666666665 134456678999999999999999 999999999998789999999 9999999999999999
Q ss_pred CcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCCC
Q 013319 273 SPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 273 ~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp~ 311 (445)
||+++|. .+|+.+ .+.|..+.++|.+++.+.+..
T Consensus 84 -Pt~~~~~----~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 84 -PTTVFLD----KEGNKFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp -SEEEEEC----TTCCEEEEEESCCCHHHHHHHHHHHCCC
T ss_pred -eEEEEEC----CCCCEEEEecCCCCHHHHHHHHHHHhcc
Confidence 9999993 256544 588988999999999988764
No 110
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.58 E-value=8.8e-16 Score=136.10 Aligned_cols=66 Identities=26% Similarity=0.485 Sum_probs=60.1
Q ss_pred CcCcccccCCCCCCC--HHHHHHHHHHHHHhhCCCCCCChH------HHHHHHHHHHHHHHcCCHHHHHHhhhc
Q 013319 29 TVDLYKVLGVERNAS--QREIQKAFHKLSLQYHPDKNKNKA------AQEKFAEINNAYDILSDEEKRKNYDLY 94 (445)
Q Consensus 29 ~~d~y~vLgv~~~a~--~~~ik~ayr~l~~~~hPd~~~~~~------~~~~f~~i~~Ay~~L~d~~~r~~yd~~ 94 (445)
..|||+||||+++++ .++||++||++++++|||+++... +.+.|..|++||++|+||.+|..||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 579999999999987 999999999999999999987532 678999999999999999999999974
No 111
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.58 E-value=5.2e-15 Score=138.17 Aligned_cols=103 Identities=14% Similarity=0.182 Sum_probs=88.5
Q ss_pred CcccccChhhHHHHhhcCCcEEEEEEEC--CCCccCCChhHHHHHHHHhc--CccEEEEEe-----CccchhhHhHhCCc
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLFFYS--PSSNRDGYESVIEEVANSME--GALKVGSIN-----CETEASLCKELGVH 269 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~Fya--p~C~~C~~~p~~~~~a~~l~--~~v~~~~Vd-----c~~~~~lc~~~~I~ 269 (445)
+.|.+||+++|++. ++.+.+|||.||| |||+ ..|+|+++|+.+. +.|.|++|| |+.++.+|++|+|+
T Consensus 5 ~~v~~Lt~~nF~~~-i~~~~~vlV~FyA~~pWCg---l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 5 KGALPLDTVTFYKV-IPKSKFVLVKFDTQYPYGE---KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TTCEECCTTHHHHH-GGGCSEEEEEECCSSCCSH---HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCceECCHHHHHHH-HcCCCCEEEEEeCCCCCCc---chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 45899999999885 4667799999999 9999 8999999999996 379999999 55689999999999
Q ss_pred --cCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhC
Q 013319 270 --RPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 270 --~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~l 309 (445)
+| |||++|+.+.. ..+..|.|.++.+.|.+||.++.
T Consensus 81 ~~~~--PTl~~f~~G~~--~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESY--PVFYLFRDGDF--ENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp GGGC--SEEEEEETTCS--SCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCC--CEEEEEeCCCc--CcceeecCCCCHHHHHHHHHHhc
Confidence 99 99999954320 13678999999999999999874
No 112
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.57 E-value=1.9e-13 Score=126.84 Aligned_cols=196 Identities=10% Similarity=0.141 Sum_probs=141.5
Q ss_pred cccc-ChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 201 IRAL-NLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 201 V~~L-t~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
+.+| +.+++++. ++.++++||.||++| |.. .++|+++|+.+ ..+.|+.+ .+.++|++++|+. |+|++
T Consensus 11 ~~~l~s~~~~~~~-l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l-~~~~F~~t---~~~~v~~~~~v~~---p~i~l 79 (227)
T 4f9z_D 11 PTWLTDVPAAMEF-IAATEVAVIGFFQDL---EIPAVPILHSMVQKF-PGVSFGIS---TDSEVLTHYNITG---NTICL 79 (227)
T ss_dssp CEECCSHHHHHHH-HHTSSEEEEEECSCS---CSTHHHHHHHHTTTC-TTSEEEEE---CCHHHHHHTTCCS---SEEEE
T ss_pred CeeeCCHHHHHHH-HhcCCeEEEEEecCC---CchhHHHHHHHHHhC-CCceEEEE---CCHHHHHHcCCCC---CeEEE
Confidence 4555 67889775 567789999999998 578 99999999999 57889875 4788999999974 99999
Q ss_pred eccCCCCCCCeeeecC----cccHHHHHHHHHhhCCCCceeccccccchhhhccCCCCEE-EEEecCCC-----ChHHHH
Q 013319 279 YSYKAGDKGSLVEYNE----HLVAKNLKSFCRDHLPRFSKRISLNRIEFTFDAKARLPSV-LLLSTKKE-----TPIIWR 348 (445)
Q Consensus 279 f~~~~~~~g~~~~y~g----~~~~~~l~~fi~~~lp~~~~~i~~~~~~~~~~~~~~~~~v-vlF~~~~~-----~~~~~~ 348 (445)
|+.. ......|.| .++.++|.+||..+..+.+..++.++..... ....+.+ ++|.+... ....|+
T Consensus 80 fk~~---~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~--~~~~~~~~l~f~~~~~~~~~~~~~~~~ 154 (227)
T 4f9z_D 80 FRLV---DNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLF--NSVIQIHLLLIMNKASPEYEENMHRYQ 154 (227)
T ss_dssp EETT---TTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHH--HSSCCEEEEEEECTTSTTHHHHHHHHH
T ss_pred EEec---CcccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHh--ccCCceEEEEEEcCCcchHHHHHHHHH
Confidence 9532 234567885 7899999999998877777777665544332 2333444 55655322 257899
Q ss_pred HHHHHhhccceEEEEeecC-CChHHHHHcCCC--CCCeEEEEccCCc-cccc-ccccChhhHHHHHHHH
Q 013319 349 VLSGMYHERLNFYDTEVHD-VSDPAVKKLGVD--ALPAIVGWLSNGE-KDVL-KTGISVKDQKSSIHEL 412 (445)
Q Consensus 349 ~lA~~~~~~~~f~~~~v~~-~~~~l~~~f~V~--~~Ptlv~~~~~~~-~~~~-~~~~~~~~~~~~~~~~ 412 (445)
.+|..+++++.|+.+.... ....+++.||++ .+|+|+++...+. .-.+ .+..+.+.|++|+.++
T Consensus 155 ~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 155 KAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp HHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred HHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 9999999999997776542 345788999999 6999998875433 2222 2456666666665544
No 113
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.57 E-value=3.7e-15 Score=121.96 Aligned_cols=102 Identities=14% Similarity=0.208 Sum_probs=86.8
Q ss_pred Cccccc-ChhhHHHHhhc---CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCC
Q 013319 199 GNIRAL-NLQVFKKEIVE---KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRS 273 (445)
Q Consensus 199 ~~V~~L-t~~~f~~~v~~---~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~ 273 (445)
+.|.++ +.++|++.+.. .+++++|.||++||++|+. .|.++++++.+. .+.++.||+++++.++++++|.++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~-- 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAM-- 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSST--
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCcc--
Confidence 347777 77899887765 4679999999999999999 999999999986 699999999999999999999999
Q ss_pred cEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 274 PRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 274 Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
||+++| .+|+.+ .+.| .+.++|.+++.+.+
T Consensus 81 Pt~~~~-----~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 81 PTFIFL-----KDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp TEEEEE-----ETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred cEEEEE-----eCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 999999 345544 4667 57889999998764
No 114
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.56 E-value=8.5e-16 Score=135.43 Aligned_cols=67 Identities=22% Similarity=0.402 Sum_probs=60.2
Q ss_pred hcCCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCChH----HHHHHHHHHHHHHHcCCHHHHHHh
Q 013319 25 AKAKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKA----AQEKFAEINNAYDILSDEEKRKNY 91 (445)
Q Consensus 25 ~~~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~~----~~~~f~~i~~Ay~~L~d~~~r~~y 91 (445)
..+...|+|+||||+++|+.++||+|||++++++|||+++... +.++|++|++||++|+|+.+|+.|
T Consensus 112 vl~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 112 VLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp GSCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HhcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3344579999999999999999999999999999999987533 789999999999999999999876
No 115
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.56 E-value=3.5e-15 Score=128.35 Aligned_cols=103 Identities=13% Similarity=0.162 Sum_probs=77.3
Q ss_pred cccccChhhHHHHhhcCCcEEEEEEECCC--CccCCC-hhHHHHHHHHhcCccE--EEEEeCccchhhHhHhCCccCCCc
Q 013319 200 NIRALNLQVFKKEIVEKGMTWLLFFYSPS--SNRDGY-ESVIEEVANSMEGALK--VGSINCETEASLCKELGVHRPRSP 274 (445)
Q Consensus 200 ~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~--C~~C~~-~p~~~~~a~~l~~~v~--~~~Vdc~~~~~lc~~~~I~~~~~P 274 (445)
.+..|+.++|++.+...+ .++|.|+++| |++|+. .|.|+++++++ +.+. |++||+++++.+|++|+|.++ |
T Consensus 18 ~~~~l~~~~f~~~i~~~~-~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~i--P 93 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVG-DGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRF--P 93 (142)
T ss_dssp TCEECCCC--------CC-SEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSS--S
T ss_pred cCcccccccHHHHHHhCC-CEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcC--C
Confidence 378899999988765444 5788899887 999999 99999999999 7788 999999999999999999999 9
Q ss_pred EEEEeccCCCCCCC-eeeecCcccHHHHHHHHHhhCCC
Q 013319 275 RIFAYSYKAGDKGS-LVEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 275 ti~~f~~~~~~~g~-~~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
|+++| ++|+ +..+.|.++.++|.+|+.+.+..
T Consensus 94 T~~~f-----k~G~~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 94 ATLVF-----TDGKLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp EEEEE-----SCC----CEESCCCHHHHHHHHHHHHC-
T ss_pred eEEEE-----eCCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 99999 3454 34588998999999999987764
No 116
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.56 E-value=1.9e-15 Score=133.53 Aligned_cols=66 Identities=30% Similarity=0.453 Sum_probs=60.2
Q ss_pred cCcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCh------HHHHHHHHHHHHHHHcCCHHHHHHhhhcC
Q 013319 30 VDLYKVLGVERNA--SQREIQKAFHKLSLQYHPDKNKNK------AAQEKFAEINNAYDILSDEEKRKNYDLYG 95 (445)
Q Consensus 30 ~d~y~vLgv~~~a--~~~~ik~ayr~l~~~~hPd~~~~~------~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g 95 (445)
+|||+||||++++ +.++||++||++++++|||+++.. .+.++|..|++||++|+||.+|..||...
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 4899999999999 999999999999999999998753 25679999999999999999999999863
No 117
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.55 E-value=7.3e-16 Score=120.46 Aligned_cols=62 Identities=24% Similarity=0.363 Sum_probs=56.2
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--hHHHHHHHHHHHHHHHcCCHHHH
Q 013319 27 AKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKN--KAAQEKFAEINNAYDILSDEEKR 88 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~--~~~~~~f~~i~~Ay~~L~d~~~r 88 (445)
....++|+||||+++|+.+|||+|||+|+++||||+++. +.+.++|++|++||++|+|...|
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 345789999999999999999999999999999999986 45889999999999999987555
No 118
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.55 E-value=7.5e-15 Score=121.13 Aligned_cols=103 Identities=12% Similarity=0.106 Sum_probs=87.1
Q ss_pred ccccc-ChhhHHHHhhc---CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCc
Q 013319 200 NIRAL-NLQVFKKEIVE---KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSP 274 (445)
Q Consensus 200 ~V~~L-t~~~f~~~v~~---~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~P 274 (445)
.|.++ +.++|++.+.. .+++++|.||++||++|+. .|.|+++++++. .+.++.||++.++.++++|+|.++ |
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~--P 83 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVEAM--P 83 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSB--S
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCCcC--c
Confidence 36777 67899887765 3678999999999999999 999999999986 699999999999999999999999 9
Q ss_pred EEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCCC
Q 013319 275 RIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 275 ti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp~ 311 (445)
|+++|+ +|+.+ .+.| .+.++|.+++.+.+..
T Consensus 84 t~~~~~-----~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 84 TFLFIK-----DGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEEEEE-----TTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred EEEEEe-----CCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 999993 45444 4667 4788999999887653
No 119
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.55 E-value=6.5e-16 Score=140.37 Aligned_cols=71 Identities=24% Similarity=0.375 Sum_probs=62.0
Q ss_pred hhhcCCCcCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCh------HHHHHHHHHHHHHHHcCCHHHHHHhhh
Q 013319 23 LNAKAKTVDLYKVLGVERN--ASQREIQKAFHKLSLQYHPDKNKNK------AAQEKFAEINNAYDILSDEEKRKNYDL 93 (445)
Q Consensus 23 ~~~~~~~~d~y~vLgv~~~--a~~~~ik~ayr~l~~~~hPd~~~~~------~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 93 (445)
++......|||+||||+++ ++.++||++||+|++++|||+++.. .+.++|++|++||++|+||.+|..||.
T Consensus 36 ~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 36 LQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp BCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred cCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 3344457899999999986 7899999999999999999998742 256789999999999999999999996
No 120
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.54 E-value=9.5e-15 Score=124.61 Aligned_cols=104 Identities=13% Similarity=0.181 Sum_probs=87.0
Q ss_pred CCccccc-ChhhHHHHhh---cCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCC
Q 013319 198 SGNIRAL-NLQVFKKEIV---EKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPR 272 (445)
Q Consensus 198 ~~~V~~L-t~~~f~~~v~---~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~ 272 (445)
...|.++ +.++|.+.+. ..+++++|.||++||++|+. .|.|+++++++. .+.++.||+++++.++++|+|.++
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~- 100 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIKAT- 100 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCEE-
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCCcc-
Confidence 3446666 5789988765 34678999999999999999 999999999984 699999999999999999999999
Q ss_pred CcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCC
Q 013319 273 SPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 273 ~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp 310 (445)
||++++ .+|+.+ .+.|. +.++|.+++.+.++
T Consensus 101 -Pt~~~~-----~~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 101 -PTFFFL-----RDGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp -SEEEEE-----ETTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred -cEEEEE-----cCCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 999998 345444 46777 78899999987654
No 121
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.54 E-value=2.3e-15 Score=117.86 Aligned_cols=57 Identities=23% Similarity=0.390 Sum_probs=51.3
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCh----HHHHHHHHHHHHHHHcCC
Q 013319 28 KTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNK----AAQEKFAEINNAYDILSD 84 (445)
Q Consensus 28 ~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~----~~~~~f~~i~~Ay~~L~d 84 (445)
...++|++|||++.|+.+|||+|||++++++|||+++.. .+.++|++|++||++|.+
T Consensus 31 ~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 31 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp TTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 336899999999999999999999999999999998743 378899999999999964
No 122
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.54 E-value=3.6e-15 Score=123.58 Aligned_cols=100 Identities=11% Similarity=0.159 Sum_probs=79.4
Q ss_pred CcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEE----eCccchhhHhHhCCccCCC
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSI----NCETEASLCKELGVHRPRS 273 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~V----dc~~~~~lc~~~~I~~~~~ 273 (445)
..+..++.++|...+ .++++++|.||+|||++|+. .|.|+++++++...+.++.+ |++....++++++|.++
T Consensus 12 ~~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~-- 88 (118)
T 1zma_A 12 KDLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTV-- 88 (118)
T ss_dssp TTSEECCHHHHHHHH-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSS--
T ss_pred hhhhcCCHHHHHHHH-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCC--
Confidence 347888999998765 55678999999999999999 99999999988655554422 22234589999999999
Q ss_pred cEEEEeccCCCCCCC-eeeecCcccHHHHHHHHH
Q 013319 274 PRIFAYSYKAGDKGS-LVEYNEHLVAKNLKSFCR 306 (445)
Q Consensus 274 Pti~~f~~~~~~~g~-~~~y~g~~~~~~l~~fi~ 306 (445)
||+++|. +|+ ...+.|..+.++|.+|+.
T Consensus 89 Pt~~~~~-----~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 89 PGFVHIT-----DGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp CEEEEEE-----TTEEEEECCTTCCHHHHHHHHT
T ss_pred CeEEEEE-----CCEEEEEecCCCCHHHHHHHhh
Confidence 9999993 443 345889989999999985
No 123
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.54 E-value=6.6e-15 Score=123.74 Aligned_cols=105 Identities=13% Similarity=0.190 Sum_probs=88.4
Q ss_pred CCccccc-ChhhHHHHhhc---CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCC
Q 013319 198 SGNIRAL-NLQVFKKEIVE---KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPR 272 (445)
Q Consensus 198 ~~~V~~L-t~~~f~~~v~~---~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~ 272 (445)
...|.++ +.++|++.+.. ++++++|.||++||++|+. .|.|+++++++. .+.++.||++++..+|++|+|.++
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~- 90 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNVEAM- 90 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTCCSS-
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCCCcc-
Confidence 4457888 56889887765 4779999999999999999 999999999986 699999999999999999999999
Q ss_pred CcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCCC
Q 013319 273 SPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 273 ~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp~ 311 (445)
||+++| .+|+.+ .+.| .+.++|.+++.+.+..
T Consensus 91 -Pt~~~~-----~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 91 -PTFLFI-----KDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp -CCCCBC-----TTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred -ceEEEE-----eCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 999998 344433 4667 5788999999987753
No 124
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.53 E-value=9e-15 Score=124.21 Aligned_cols=105 Identities=7% Similarity=0.015 Sum_probs=85.3
Q ss_pred CCcccccCh-hhHHHHhhcC-CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCc
Q 013319 198 SGNIRALNL-QVFKKEIVEK-GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSP 274 (445)
Q Consensus 198 ~~~V~~Lt~-~~f~~~v~~~-~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~P 274 (445)
.+.|.+++. ++|+..+... ++++||.||++||++|+. .|.|+++++.+ .+.++.||++++..+|++|+|.++ |
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~--P 94 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKAL--P 94 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSS--S
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCC--C
Confidence 445788875 7887665443 469999999999999999 99999998887 589999999999999999999999 9
Q ss_pred EEEEeccCCCCCCC---eeeecCcccHHHHHHHHHhhCC
Q 013319 275 RIFAYSYKAGDKGS---LVEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 275 ti~~f~~~~~~~g~---~~~y~g~~~~~~l~~fi~~~lp 310 (445)
|+++|.. .+|+ ...+.|. +.++|.+++.+.+.
T Consensus 95 t~~~~~~---~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 95 TFEFYFN---LNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEEEEE---ETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEEEEEe---cCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9999831 0333 3357777 78999999988764
No 125
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.52 E-value=2.7e-14 Score=121.56 Aligned_cols=99 Identities=13% Similarity=0.179 Sum_probs=82.5
Q ss_pred CcccccChhhHHHHhhcCC--cEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcE
Q 013319 199 GNIRALNLQVFKKEIVEKG--MTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPR 275 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~--~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pt 275 (445)
+.|.+|+.++|.+.|.+.+ +++||.||++||++|+. .|.|+++++++. .+.|+.||++++. ++|+|.++ ||
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~---~~~~i~~~--Pt 83 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI---EHYHDNCL--PT 83 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC---SSCCSSCC--SE
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc---ccCCCCCC--CE
Confidence 4488899999998887643 58999999999999999 999999999984 6999999999875 78999999 99
Q ss_pred EEEeccCCCCCCCe-eeecCcc-------cHHHHHHHHHhh
Q 013319 276 IFAYSYKAGDKGSL-VEYNEHL-------VAKNLKSFCRDH 308 (445)
Q Consensus 276 i~~f~~~~~~~g~~-~~y~g~~-------~~~~l~~fi~~~ 308 (445)
+++|. +|+. ..+.|.. +.++|..++.+.
T Consensus 84 ~~~~~-----~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 84 IFVYK-----NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEES-----SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEE-----CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 99993 4433 3455653 678899999875
No 126
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.52 E-value=2.7e-14 Score=132.07 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=86.3
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhc----CccEEEEEeCccchhhHhHhCCccCCCcE
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSME----GALKVGSINCETEASLCKELGVHRPRSPR 275 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~----~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pt 275 (445)
+..|+.++|+......+.+++|.||++||++|+. .|.|+++++.+. +.+.++.|||++++.+|++|+|.++ ||
T Consensus 118 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~--Pt 195 (226)
T 1a8l_A 118 ETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAV--PK 195 (226)
T ss_dssp CCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSS--CE
T ss_pred CCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCccc--Ce
Confidence 4678888997643333344499999999999999 999999999997 5899999999999999999999999 99
Q ss_pred EEEeccCCCCCCC-eeeecCcccHHHHHHHHHhhC
Q 013319 276 IFAYSYKAGDKGS-LVEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 276 i~~f~~~~~~~g~-~~~y~g~~~~~~l~~fi~~~l 309 (445)
+++|+ +|. ...|.|.++.++|.+|+.+.+
T Consensus 196 ~~~~~-----~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 196 IVIQV-----NGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEEEE-----TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEe-----CCceeEEEcCCCCHHHHHHHHHHhh
Confidence 99994 343 456899999999999998754
No 127
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.51 E-value=2.2e-15 Score=152.76 Aligned_cols=108 Identities=17% Similarity=0.320 Sum_probs=86.2
Q ss_pred CCCCCcccccChhhHHHHhhcC-CcEEEEEEECCCCccCCC-hhHHHHHHHHhc---C-----ccEEEEEeCccchhhHh
Q 013319 195 RSSSGNIRALNLQVFKKEIVEK-GMTWLLFFYSPSSNRDGY-ESVIEEVANSME---G-----ALKVGSINCETEASLCK 264 (445)
Q Consensus 195 ~~~~~~V~~Lt~~~f~~~v~~~-~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~---~-----~v~~~~Vdc~~~~~lc~ 264 (445)
+..++.|.+|+.++|++.+... ++++||.|||+||++|+. .|.|+++++++. + .+.|++|||++++.+|+
T Consensus 19 ~~~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~ 98 (470)
T 3qcp_A 19 FHLDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCR 98 (470)
T ss_dssp CTTCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHH
T ss_pred cCCCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHH
Confidence 4456779999999998766543 358999999999999999 999999999997 2 59999999999999999
Q ss_pred HhCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHh
Q 013319 265 ELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRD 307 (445)
Q Consensus 265 ~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~ 307 (445)
+|+|.++ ||+++|..+.. ..+..|.|.++.+.| .|+.+
T Consensus 99 ~y~V~~~--PTlilf~~gg~--~~~~~y~G~r~~e~L-~fI~k 136 (470)
T 3qcp_A 99 KYDINFV--PRLFFFYPRDS--CRSNEECGTSSLEHV-AFENS 136 (470)
T ss_dssp HTTCCSS--CEEEEEEESSC--CCTTSCCCCCCEEEE-ECSCT
T ss_pred HcCCCcc--CeEEEEECCCc--eEEEEeeCCCCHHHH-HHHHH
Confidence 9999999 99999954321 134567776655544 44433
No 128
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.50 E-value=7.2e-14 Score=108.15 Aligned_cols=82 Identities=27% Similarity=0.332 Sum_probs=73.6
Q ss_pred cEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCcc
Q 013319 218 MTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHL 296 (445)
Q Consensus 218 ~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~ 296 (445)
.+.+|.||++||++|+. .|.++++++++.+.+.+..||+++++.++++++|.++ ||+++ +|+. .+.|..
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~--Pt~~~-------~G~~-~~~G~~ 72 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAV--PTIVI-------NGDV-EFIGAP 72 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCS--SEEEE-------TTEE-ECCSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCccc--CEEEE-------CCEE-eeecCC
Confidence 36899999999999999 9999999999987899999999999999999999999 99988 2444 788888
Q ss_pred cHHHHHHHHHhhC
Q 013319 297 VAKNLKSFCRDHL 309 (445)
Q Consensus 297 ~~~~l~~fi~~~l 309 (445)
+.++|.+++.+.+
T Consensus 73 ~~~~l~~~l~~~l 85 (85)
T 1fo5_A 73 TKEALVEAIKKRL 85 (85)
T ss_dssp SSHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhC
Confidence 8899999998754
No 129
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.50 E-value=6e-15 Score=119.41 Aligned_cols=60 Identities=20% Similarity=0.265 Sum_probs=52.9
Q ss_pred cCCCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCh--------HHHHHHHHHHHHHHHcCCHH
Q 013319 26 KAKTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNK--------AAQEKFAEINNAYDILSDEE 86 (445)
Q Consensus 26 ~~~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~--------~~~~~f~~i~~Ay~~L~d~~ 86 (445)
.....|||+||+++. |+.++||+|||++++++||||++.+ .+.++|++|++||++|+|+.
T Consensus 37 l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 37 LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 345689999999996 9999999999999999999997631 36889999999999999974
No 130
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.50 E-value=4.5e-14 Score=145.61 Aligned_cols=110 Identities=12% Similarity=0.208 Sum_probs=97.2
Q ss_pred CCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC--ccEEEEEeCccchhhHhHhCCccCCC
Q 013319 197 SSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG--ALKVGSINCETEASLCKELGVHRPRS 273 (445)
Q Consensus 197 ~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~--~v~~~~Vdc~~~~~lc~~~~I~~~~~ 273 (445)
....|..++.++|+..+.+.++++||.||||||++|+. .|.|+++++.+++ .+.++.||++.+ .++++++|.++
T Consensus 350 ~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v~~~-- 426 (481)
T 3f8u_A 350 NDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGF-- 426 (481)
T ss_dssp CCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCCCSS--
T ss_pred CCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-hhHhhCCCccc--
Confidence 45678899999999888777889999999999999999 9999999999987 699999999998 89999999999
Q ss_pred cEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCCC
Q 013319 274 PRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 274 Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
||+++|+.+.. -.+..|.|.++.++|.+|+.++...
T Consensus 427 Pt~~~~~~~~~--~~~~~~~G~~~~~~l~~~l~~~~~~ 462 (481)
T 3f8u_A 427 PTIYFSPANKK--LNPKKYEGGRELSDFISYLQREATN 462 (481)
T ss_dssp SEEEEECTTCT--TSCEECCSCCSHHHHHHHHHHHCSS
T ss_pred CEEEEEeCCCe--EeeeEeCCCCCHHHHHHHHHHhcCC
Confidence 99999954321 1268899999999999999998764
No 131
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.49 E-value=2.6e-14 Score=131.72 Aligned_cols=100 Identities=16% Similarity=0.216 Sum_probs=85.7
Q ss_pred ccccc-ChhhHHHHhhcCC--cEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcE
Q 013319 200 NIRAL-NLQVFKKEIVEKG--MTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPR 275 (445)
Q Consensus 200 ~V~~L-t~~~f~~~v~~~~--~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pt 275 (445)
.|.+| +.++|.+.|.+.. .++||.||+|||++|+. .|.|+++|.++. .+.|++|||+ ++.+|.+|+|.++ ||
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~l~~~~~i~~~--PT 175 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTGAGDRFSSDVL--PT 175 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHTCSTTSCGGGC--SE
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHHHHHHCCCCCC--CE
Confidence 37888 8999998887654 79999999999999999 999999999984 7999999999 8889999999999 99
Q ss_pred EEEeccCCCCCCCe-eeecCcccH-------HHHHHHHHhh
Q 013319 276 IFAYSYKAGDKGSL-VEYNEHLVA-------KNLKSFCRDH 308 (445)
Q Consensus 276 i~~f~~~~~~~g~~-~~y~g~~~~-------~~l~~fi~~~ 308 (445)
|++|. +|.. ..+.|.... +.|..|+.++
T Consensus 176 l~~~~-----~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 176 LLVYK-----GGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEE-----TTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEE-----CCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 99993 4544 357776654 8899999864
No 132
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.49 E-value=8.6e-15 Score=130.19 Aligned_cols=68 Identities=26% Similarity=0.464 Sum_probs=60.7
Q ss_pred hcCCCcCccccc------CCCC-CCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHHHHhhhc
Q 013319 25 AKAKTVDLYKVL------GVER-NASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKNYDLY 94 (445)
Q Consensus 25 ~~~~~~d~y~vL------gv~~-~a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~ 94 (445)
......|||+|| |+++ +++.++||++||++++++|||+++. +.++|++|++||++|+||.+|..||..
T Consensus 6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 345678999999 4665 8999999999999999999999976 678999999999999999999999973
No 133
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.48 E-value=1.1e-13 Score=107.17 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=73.0
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCccc
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLV 297 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~ 297 (445)
+.+|.||++||++|+. .|.++++++++.+.+.+..||+++++.++++++|.++ ||+++ +|+. .+.|..+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~--Pt~~~-------~G~~-~~~G~~~ 72 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAV--PAIAI-------NGVV-RFVGAPS 72 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCS--SEEEE-------TTTE-EEECSSC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceee--CEEEE-------CCEE-EEccCCC
Confidence 3689999999999999 9999999999988899999999999999999999999 99988 2444 7888888
Q ss_pred HHHHHHHHHhhC
Q 013319 298 AKNLKSFCRDHL 309 (445)
Q Consensus 298 ~~~l~~fi~~~l 309 (445)
.++|.+++.+.+
T Consensus 73 ~~~l~~~l~~~l 84 (85)
T 1nho_A 73 REELFEAINDEM 84 (85)
T ss_dssp CHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 899999998765
No 134
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.47 E-value=8.7e-14 Score=116.32 Aligned_cols=99 Identities=14% Similarity=0.194 Sum_probs=83.1
Q ss_pred ccccChhhHHHHhhc-CCcEEEEEEECC-------CCccCCC-hhHHHHHHHHhcCccEEEEEeC-------ccchhhHh
Q 013319 201 IRALNLQVFKKEIVE-KGMTWLLFFYSP-------SSNRDGY-ESVIEEVANSMEGALKVGSINC-------ETEASLCK 264 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~-~~~~~lV~Fyap-------~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc-------~~~~~lc~ 264 (445)
|...+.++|.+.+.+ .+++++|.|||+ ||++|+. .|.++++++++.+.+.++.||+ +.+..+++
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~ 86 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRK 86 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHH
Confidence 566788999887776 578999999999 9999999 9999999999987899999999 78899999
Q ss_pred HhCCccCCCcEEEEeccCCCCCCCeee-ecCcccHHHHHHHHHh
Q 013319 265 ELGVHRPRSPRIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRD 307 (445)
Q Consensus 265 ~~~I~~~~~Pti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~ 307 (445)
+++|.++ ||+++|. ++..+. +.+ .+.+.|.+|+.+
T Consensus 87 ~~~i~~~--Pt~~~~~-----~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 87 NLKVTAV--PTLLKYG-----TPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHCCCSS--SEEEETT-----SSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HCCCCee--CEEEEEc-----CCceEecccc-CCHHHHHHHHhc
Confidence 9999999 9999993 233333 433 467888888864
No 135
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.47 E-value=5.1e-14 Score=118.44 Aligned_cols=104 Identities=15% Similarity=0.132 Sum_probs=85.8
Q ss_pred cccChhhHHHHhh---cCCcEEEEEEECCCCccCCC-hhHH---HHHHHHhcCccEEEEEeCc--cchhhHhHhCCccCC
Q 013319 202 RALNLQVFKKEIV---EKGMTWLLFFYSPSSNRDGY-ESVI---EEVANSMEGALKVGSINCE--TEASLCKELGVHRPR 272 (445)
Q Consensus 202 ~~Lt~~~f~~~v~---~~~~~~lV~Fyap~C~~C~~-~p~~---~~~a~~l~~~v~~~~Vdc~--~~~~lc~~~~I~~~~ 272 (445)
..++..+|++.+. ..++++||.||++||++|+. .|.+ +++++.++..+.++.|||+ .+..+|++|+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~- 87 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAY- 87 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSS-
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCC-
Confidence 5566777876653 35678999999999999999 9999 7888877777899999998 47899999999999
Q ss_pred CcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCCC
Q 013319 273 SPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 273 ~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp~ 311 (445)
||+++|. .+|+.+ .+.|..+.++|.++|.+.+.+
T Consensus 88 -Pt~~~~d----~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 88 -PTLLFIN----SSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp -CEEEEEC----TTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred -CEEEEEC----CCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 9999993 345444 588988999999999987654
No 136
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.47 E-value=7.5e-15 Score=110.31 Aligned_cols=57 Identities=21% Similarity=0.372 Sum_probs=51.1
Q ss_pred CcCcccccCCCC-CCCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCHHHH
Q 013319 29 TVDLYKVLGVER-NASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKR 88 (445)
Q Consensus 29 ~~d~y~vLgv~~-~a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~~~r 88 (445)
..++|+||||++ +++.++||+|||++++++|||++.+ .+.|++|++||++|+|+..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC---HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHhhhhhc
Confidence 468999999999 7999999999999999999999754 46999999999999987544
No 137
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.47 E-value=8.2e-14 Score=118.27 Aligned_cols=103 Identities=13% Similarity=0.296 Sum_probs=89.1
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCcc--CCCcEEE
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHR--PRSPRIF 277 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~--~~~Pti~ 277 (445)
|.++|.++|++. .+++.+++|.||++ |++|+. .|.++++|+++++.+.|++||.++++.++.+|||++ + ||++
T Consensus 8 v~~~t~~~f~~~-~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~i--Ptl~ 83 (133)
T 2djk_A 8 IGEIGPETYSDY-MSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKF--PAFA 83 (133)
T ss_dssp SEECCHHHHHHH-HHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSS--SEEE
T ss_pred eeccChHHHHHH-hcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccC--CEEE
Confidence 788999999765 56777899999999 899999 999999999999999999999999999999999999 8 9999
Q ss_pred EeccCCCCCCCeeeec--CcccHHHHHHHHHhhCC
Q 013319 278 AYSYKAGDKGSLVEYN--EHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 278 ~f~~~~~~~g~~~~y~--g~~~~~~l~~fi~~~lp 310 (445)
+|.. .+|..+... |..+.++|.+|+.+.+.
T Consensus 84 i~~~---~~g~~~~~~~~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 84 IQEV---AKNQKFPFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp EECT---TTCCBCCCCSSSCCCHHHHHHHHHHHHH
T ss_pred EEec---CcCcccCCCCccccCHHHHHHHHHHHHc
Confidence 9942 124445554 88899999999987653
No 138
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.45 E-value=9.6e-14 Score=117.83 Aligned_cols=101 Identities=20% Similarity=0.271 Sum_probs=83.0
Q ss_pred cChhhHHHHhhc-CCcEEEEEEECCCCccCCC-hhHH---HHHHHHhcCccEEEEEeC----ccchhhHhHhCCccCCCc
Q 013319 204 LNLQVFKKEIVE-KGMTWLLFFYSPSSNRDGY-ESVI---EEVANSMEGALKVGSINC----ETEASLCKELGVHRPRSP 274 (445)
Q Consensus 204 Lt~~~f~~~v~~-~~~~~lV~Fyap~C~~C~~-~p~~---~~~a~~l~~~v~~~~Vdc----~~~~~lc~~~~I~~~~~P 274 (445)
.+.++|+..+.+ .++++||.||++||++|+. .|.+ +++++.+++ +.++.||| +.+..+|++|+|.++ |
T Consensus 17 ~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~v~~~--P 93 (134)
T 2fwh_A 17 KTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLNVLGL--P 93 (134)
T ss_dssp CSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTTCCSS--S
T ss_pred cCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcCCCCC--C
Confidence 356777766654 3678999999999999999 9999 999999875 99999999 567899999999999 9
Q ss_pred EEEEeccCCCCCCCee---eecCcccHHHHHHHHHhhCCC
Q 013319 275 RIFAYSYKAGDKGSLV---EYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 275 ti~~f~~~~~~~g~~~---~y~g~~~~~~l~~fi~~~lp~ 311 (445)
|+++|. .+|+.+ .+.|..+.++|.+++.+.-|.
T Consensus 94 t~~~~d----~~G~~v~~~~~~G~~~~~~l~~~l~~~~~~ 129 (134)
T 2fwh_A 94 TILFFD----GQGQEHPQARVTGFMDAETFSAHLRDRQPH 129 (134)
T ss_dssp EEEEEC----TTSCBCGGGCBCSCCCHHHHHHHHHHC---
T ss_pred EEEEEC----CCCCEeeeeeeeeccCHHHHHHHHHhcCcc
Confidence 999992 356654 688999999999999876553
No 139
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.45 E-value=1.1e-13 Score=129.63 Aligned_cols=100 Identities=15% Similarity=0.211 Sum_probs=83.3
Q ss_pred ccccc-ChhhHHHHhhcC--CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcE
Q 013319 200 NIRAL-NLQVFKKEIVEK--GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPR 275 (445)
Q Consensus 200 ~V~~L-t~~~f~~~v~~~--~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pt 275 (445)
.|.+| +.++|.+.|.+. +.++||.||||||++|+. .|.|+++|.++.+ +.|++||++. ..+|.+|+|.++ ||
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~-~~l~~~~~I~~~--PT 188 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN-TGAGDRFSSDVL--PT 188 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH-HCCTTSSCTTTC--SE
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc-HHHHHHCCCCCC--CE
Confidence 47888 789999888653 679999999999999999 9999999999865 9999999987 789999999999 99
Q ss_pred EEEeccCCCCCCCee-eecCc-------ccHHHHHHHHHhh
Q 013319 276 IFAYSYKAGDKGSLV-EYNEH-------LVAKNLKSFCRDH 308 (445)
Q Consensus 276 i~~f~~~~~~~g~~~-~y~g~-------~~~~~l~~fi~~~ 308 (445)
+++|. +|..+ .+.|. ++.+.|..||.++
T Consensus 189 ll~~~-----~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 189 LLVYK-----GGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp EEEEE-----TTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred EEEEE-----CCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 99993 45433 34443 3567899999875
No 140
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.45 E-value=1.5e-13 Score=127.35 Aligned_cols=100 Identities=11% Similarity=0.054 Sum_probs=85.7
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEe
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f 279 (445)
+..|++++|+..+...+.+++|.||++||++|+. .|.|++++.++ +.+.++.|||++++.+|++|+|.++ ||+++
T Consensus 120 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~~~l~~~~~v~~~--Pt~~~- 195 (229)
T 2ywm_A 120 KPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASENQDLAEQFQVVGV--PKIVI- 195 (229)
T ss_dssp CCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGCHHHHHHTTCCSS--SEEEE-
T ss_pred ccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHHcCCccc--CEEEE-
Confidence 6788999997765333445588999999999999 99999999998 5799999999999999999999999 99988
Q ss_pred ccCCCCCCCeeeecCcccHHHHHHHHHhhCC
Q 013319 280 SYKAGDKGSLVEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 280 ~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp 310 (445)
+ |++..|.|.++.++|.+|+.+.+.
T Consensus 196 -~-----G~~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 196 -N-----KGVAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp -G-----GGTEEEESCCCHHHHHHHHHHHHH
T ss_pred -C-----CEEEEeeCCCCHHHHHHHHHHHhh
Confidence 2 334569999999999999987653
No 141
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.45 E-value=7.3e-14 Score=144.95 Aligned_cols=109 Identities=13% Similarity=0.173 Sum_probs=93.5
Q ss_pred CCCcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhc-C--ccEEEEEeCccchhhHhHhCCccCC
Q 013319 197 SSGNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSME-G--ALKVGSINCETEASLCKELGVHRPR 272 (445)
Q Consensus 197 ~~~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~-~--~v~~~~Vdc~~~~~lc~~~~I~~~~ 272 (445)
.++.|..|+.++|+..+.+.++++||.||||||++|+. .|.|+++++.+. + .+.+++|||+.+... . ++|.++
T Consensus 356 ~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~- 432 (504)
T 2b5e_A 356 QDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGY- 432 (504)
T ss_dssp CSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSS-
T ss_pred ccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceec-
Confidence 35679999999999988888889999999999999999 999999999987 3 799999999987644 4 999999
Q ss_pred CcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCCC
Q 013319 273 SPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 273 ~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
||+++|+.+. ...+..|.|.++.++|.+||.+++..
T Consensus 433 -Pt~~~~~~G~--~~~~~~~~G~~~~~~l~~~i~~~~~~ 468 (504)
T 2b5e_A 433 -PTIVLYPGGK--KSESVVYQGSRSLDSLFDFIKENGHF 468 (504)
T ss_dssp -SEEEEECCTT--SCCCCBCCSCCCHHHHHHHHHHHCTT
T ss_pred -CeEEEEeCCc--eecceEecCCCCHHHHHHHHHhcCCC
Confidence 9999994332 11267799999999999999998764
No 142
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.45 E-value=4.9e-12 Score=125.41 Aligned_cols=200 Identities=10% Similarity=0.137 Sum_probs=145.6
Q ss_pred ccccc-ChhhHHHHhhcCCcEEEEEEECCCCccCCChhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 200 NIRAL-NLQVFKKEIVEKGMTWLLFFYSPSSNRDGYESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 200 ~V~~L-t~~~f~~~v~~~~~~~lV~Fyap~C~~C~~~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
.|..| +.+++++. +..+++++|-|+.+-+..+ ...|.++|+.+ ..+.|+. ..+..+|++++|.. |+|++
T Consensus 18 ~~~~l~~~~~~~~~-~~~~~~~vvgff~~~~~~~--~~~f~~~A~~~-~~~~F~~---t~~~~v~~~~~v~~---~~i~l 87 (361)
T 3uem_A 18 FATTLPDGAAAESL-VESSEVAVIGFFKDVESDS--AKQFLQAAEAI-DDIPFGI---TSNSDVFSKYQLDK---DGVVL 87 (361)
T ss_dssp SSEECCSHHHHHHH-HHTSSEEEEEECSCTTSHH--HHHHHHHHHHC-SSSCEEE---ECCHHHHHHTTCSS---SEEEE
T ss_pred cceecCCHHHHHHH-HhcCCcEEEEEEcCCCchH--HHHHHHHHhcC-CCceEEE---ECcHHHHHHhCCCC---CeEEE
Confidence 36777 45777665 4556788888987654322 67999999999 5677764 45789999999875 89999
Q ss_pred eccCCCCCCCeeeecCcccHHHHHHHHHhhCCCCceeccccccchhhhccCCCCEEEEEecCCCC-----hHHHHHHHHH
Q 013319 279 YSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPRFSKRISLNRIEFTFDAKARLPSVLLLSTKKET-----PIIWRVLSGM 353 (445)
Q Consensus 279 f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~~~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~~-----~~~~~~lA~~ 353 (445)
|... ......|.|..+.++|.+||..+..+.+..++.++...... ....+++++|...... .+.|+.+|..
T Consensus 88 fk~f---~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~-~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~ 163 (361)
T 3uem_A 88 FKKF---DEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFG-GEIKTHILLFLPKSVSDYDGKLSNFKTAAES 163 (361)
T ss_dssp EESS---TTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHS-CSCCEEEEEECCSSSSSHHHHHHHHHHHHGG
T ss_pred EEec---CCCccccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhc-CCCCcEEEEEEeCCchhHHHHHHHHHHHHHH
Confidence 9532 24568899999999999999988877777777665543332 2333567778765432 5789999999
Q ss_pred hhccceEEEEeecC-CChHHHHHcCCCC--CCeEEEEccCCcccccc---cccChhhHHHHHHHHH
Q 013319 354 YHERLNFYDTEVHD-VSDPAVKKLGVDA--LPAIVGWLSNGEKDVLK---TGISVKDQKSSIHELS 413 (445)
Q Consensus 354 ~~~~~~f~~~~v~~-~~~~l~~~f~V~~--~Ptlv~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 413 (445)
|++++.|+.+.... .+..+++.|||+. +|+++++..++....|. +..+.++|+.++..+.
T Consensus 164 ~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l 229 (361)
T 3uem_A 164 FKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFL 229 (361)
T ss_dssp GTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHH
T ss_pred ccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHh
Confidence 99999997665442 3688999999998 99999888766555665 5677777777766554
No 143
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.43 E-value=1.3e-11 Score=122.00 Aligned_cols=200 Identities=11% Similarity=0.081 Sum_probs=141.4
Q ss_pred ccccc-ChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 200 NIRAL-NLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 200 ~V~~L-t~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
.+..| +.+++++.+...+.+++|.||++|| .. .+.|.++|..+.+.+.|+.++ +..+|++++|. + |+|+
T Consensus 124 ~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~---~~~~~~~~~~A~~~~~~~~f~~~~---~~~~~~~~~v~-~--p~i~ 194 (350)
T 1sji_A 124 PVEIINSKLEVQAFERIEDQIKLIGFFKSEE---SEYYKAFEEAAEHFQPYIKFFATF---DKGVAKKLSLK-M--NEVD 194 (350)
T ss_dssp SEEECCSHHHHHHHHHCCSSCEEEEECSCTT---SHHHHHHHHHHHHTTTTSEEEEEC---CHHHHHHHTCC-T--TCEE
T ss_pred cceeccchHHHHHHhccCCCcEEEEEECCCC---cHHHHHHHHHHHhhccCcEEEEEC---CHHHHHHcCCC-C--CcEE
Confidence 36777 4678877654145578999999974 55 899999999998889999885 56799999999 8 9999
Q ss_pred EeccCCCCCCCeeeecCc-ccHHHHHHHHHhhCCCCceeccccccchhhhccCCCCEEEEEecCCC-----ChHHHHHHH
Q 013319 278 AYSYKAGDKGSLVEYNEH-LVAKNLKSFCRDHLPRFSKRISLNRIEFTFDAKARLPSVLLLSTKKE-----TPIIWRVLS 351 (445)
Q Consensus 278 ~f~~~~~~~g~~~~y~g~-~~~~~l~~fi~~~lp~~~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~-----~~~~~~~lA 351 (445)
+|+.. ....+.|.|. ++.++|.+||..+..+.+..++.++.............+++|..... ....++.+|
T Consensus 195 ~~~~~---~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA 271 (350)
T 1sji_A 195 FYEPF---MDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVA 271 (350)
T ss_dssp EECTT---CSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEeCC---CCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHH
Confidence 99542 2356789997 89999999999887777777776665433322111234555665433 356788999
Q ss_pred HHhhc--cceEEEEeecCCChHHH----HHcCCC-CCCeEEEEccCCc--ccc-ccc---ccChhhHHHHHHHH
Q 013319 352 GMYHE--RLNFYDTEVHDVSDPAV----KKLGVD-ALPAIVGWLSNGE--KDV-LKT---GISVKDQKSSIHEL 412 (445)
Q Consensus 352 ~~~~~--~~~f~~~~v~~~~~~l~----~~f~V~-~~Ptlv~~~~~~~--~~~-~~~---~~~~~~~~~~~~~~ 412 (445)
.++++ ++.|+.+... ....++ +.||++ .+|+|+++...+. ... +.+ ..+.+.|.+|+.++
T Consensus 272 ~~~~~~~~~~f~~id~~-~~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~ 344 (350)
T 1sji_A 272 RDNTDNPDLSIVWIDPD-DFPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDV 344 (350)
T ss_dssp HHGGGCSSCCEEEECGG-GCHHHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHH
T ss_pred HHhCCCCceEEEEECch-hhHHHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHH
Confidence 99987 8888766543 445667 789998 4899998876322 222 332 45556665555543
No 144
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.42 E-value=2.4e-13 Score=114.86 Aligned_cols=89 Identities=11% Similarity=0.152 Sum_probs=76.0
Q ss_pred hcCCcEEEEEEECCCCccCCC-hhHHH--HHHHHhcCccEEEEEeC---ccchhhHhHhCC---ccCCCcEEEEeccCCC
Q 013319 214 VEKGMTWLLFFYSPSSNRDGY-ESVIE--EVANSMEGALKVGSINC---ETEASLCKELGV---HRPRSPRIFAYSYKAG 284 (445)
Q Consensus 214 ~~~~~~~lV~Fyap~C~~C~~-~p~~~--~~a~~l~~~v~~~~Vdc---~~~~~lc~~~~I---~~~~~Pti~~f~~~~~ 284 (445)
...++++||.||++||++|+. .|.|+ +++..+.+.+.++.||+ +++..++++|+| .++ ||+++|.
T Consensus 26 ~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~--Pt~~~~d---- 99 (133)
T 3fk8_A 26 KRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGI--PAVVVVN---- 99 (133)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCS--SEEEEEC----
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCcc--ceEEEEC----
Confidence 355779999999999999999 99999 99999977899999999 899999999999 999 9999992
Q ss_pred CCCCee-eecC-------cccHHHHHHHHHhh
Q 013319 285 DKGSLV-EYNE-------HLVAKNLKSFCRDH 308 (445)
Q Consensus 285 ~~g~~~-~y~g-------~~~~~~l~~fi~~~ 308 (445)
.+|+.+ .+.| ..+.++|.+|+.+.
T Consensus 100 ~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 100 SDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp TTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 345444 4556 56788999998764
No 145
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.41 E-value=5.5e-13 Score=125.12 Aligned_cols=99 Identities=13% Similarity=0.115 Sum_probs=82.4
Q ss_pred ccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhc----CccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 203 ALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSME----GALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 203 ~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~----~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
.+++++++....-.+.+++|.||||||++|+. .|.|++++.++. +.|.++.|||+.++.+|++|+|.++ ||++
T Consensus 124 ~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~v--Pt~~ 201 (243)
T 2hls_A 124 GLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSV--PSIA 201 (243)
T ss_dssp CCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSS--SEEE
T ss_pred CCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeee--CeEE
Confidence 45566665432234567899999999999999 999999999983 5799999999999999999999999 9998
Q ss_pred EeccCCCCCCCeeeecCcccHHHHHHHHHhhCCC
Q 013319 278 AYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 278 ~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
+ +|+. .|.|.++.++|.+++.+.+..
T Consensus 202 i-------~G~~-~~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 202 I-------NGYL-VFVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp E-------TTEE-EEESCCCHHHHHHHHHHHHTT
T ss_pred E-------CCEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 8 2443 499999999999999988764
No 146
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.41 E-value=1.6e-11 Score=122.26 Aligned_cols=201 Identities=9% Similarity=0.066 Sum_probs=142.6
Q ss_pred cccccC-hhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 200 NIRALN-LQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 200 ~V~~Lt-~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
.|..++ .+++++.+...+++++|.||++|| .. .+.|.++|..+.+.+.|+.++ +..+|++++|+ . |+|+
T Consensus 126 ~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~---~~~~~~f~~~A~~~~~~~~F~~~~---~~~~~~~~~v~-~--p~i~ 196 (367)
T 3us3_A 126 PVELIEGERELQAFENIEDEIKLIGYFKNKD---SEHYKAFKEAAEEFHPYIPFFATF---DSKVAKKLTLK-L--NEID 196 (367)
T ss_dssp SEEECCSHHHHHHHHHCCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTSCEEEEC---CHHHHHHHTCC-T--TCEE
T ss_pred CcEEcCCHHHHHHHhccCCCcEEEEEECCCC---chHHHHHHHHHHhhcCCcEEEEEC---CHHHHHHcCCC-C--CeEE
Confidence 367774 678877654356789999999985 46 889999999999889999986 45799999998 4 9999
Q ss_pred EeccCCCCCCCeeeecCc-ccHHHHHHHHHhhCCCCceeccccccchhhhccCCCCEEEEEecCCC-----ChHHHHHHH
Q 013319 278 AYSYKAGDKGSLVEYNEH-LVAKNLKSFCRDHLPRFSKRISLNRIEFTFDAKARLPSVLLLSTKKE-----TPIIWRVLS 351 (445)
Q Consensus 278 ~f~~~~~~~g~~~~y~g~-~~~~~l~~fi~~~lp~~~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~-----~~~~~~~lA 351 (445)
+|+.. ....+.|.|. ++.++|.+||..+..+.+..++..+...........+.+++|.+... ....++.+|
T Consensus 197 lf~~~---~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA 273 (367)
T 3us3_A 197 FYEAF---MEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVA 273 (367)
T ss_dssp EECTT---CSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEcCC---CCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHH
Confidence 99542 2456889995 89999999999887777777776654333322223456677776432 245689999
Q ss_pred HHhhc--cceEEEEeecCCChH---HHHHcCCC-CCCeEEEEccCCc-ccc--ccc---ccChhhHHHHHHHH
Q 013319 352 GMYHE--RLNFYDTEVHDVSDP---AVKKLGVD-ALPAIVGWLSNGE-KDV--LKT---GISVKDQKSSIHEL 412 (445)
Q Consensus 352 ~~~~~--~~~f~~~~v~~~~~~---l~~~f~V~-~~Ptlv~~~~~~~-~~~--~~~---~~~~~~~~~~~~~~ 412 (445)
..+++ ++.|+.+........ +.+.||++ .+|+++++...+. ... +.+ ..+.++|..|+.++
T Consensus 274 ~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~ 346 (367)
T 3us3_A 274 QDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDV 346 (367)
T ss_dssp HHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHH
T ss_pred HHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHH
Confidence 99998 689977765532222 24569998 6999998876443 223 332 46666666555543
No 147
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.40 E-value=3.1e-11 Score=113.75 Aligned_cols=216 Identities=14% Similarity=0.184 Sum_probs=142.4
Q ss_pred cccccC-hhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 200 NIRALN-LQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 200 ~V~~Lt-~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
.|.+|+ .+.++ .+++.+++++|-|+++| |.. .+.|.++|..+.+.+.|+.+. +..+++++++.. |+|+
T Consensus 7 ~v~~l~s~~~~~-~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~---p~i~ 76 (252)
T 2h8l_A 7 ASVPLRTEEEFK-KFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG---EGII 76 (252)
T ss_dssp CEEECCSHHHHH-HHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS---EEEE
T ss_pred CceeecCHHHHH-HHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC---CcEE
Confidence 378885 45554 45666778999999998 556 889999999998889999884 577999999983 9999
Q ss_pred EeccCCC---CCCCeeee-cCcccHHHHHHHHHhhCCCCceeccccccchhhhccCCCCEEEEEecC--CC-------Ch
Q 013319 278 AYSYKAG---DKGSLVEY-NEHLVAKNLKSFCRDHLPRFSKRISLNRIEFTFDAKARLPSVLLLSTK--KE-------TP 344 (445)
Q Consensus 278 ~f~~~~~---~~g~~~~y-~g~~~~~~l~~fi~~~lp~~~~~i~~~~~~~~~~~~~~~~~vvlF~~~--~~-------~~ 344 (445)
+|..+.. -....+.| .|.++.++|.+||..+.-+.+..++.++.... ...+.+++|... .. ..
T Consensus 77 ~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~ 152 (252)
T 2h8l_A 77 LFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLI----QGKDLLIAYYDVDYEKNAKGSNYWR 152 (252)
T ss_dssp EECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHH----SSSSEEEEEECCBTTTBHHHHHHHH
T ss_pred EEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhh----cCCCeEEEEeecchhhcchhHHHHH
Confidence 9953210 12356789 99999999999999876666777776664433 233556665432 11 23
Q ss_pred HHHHHHHHHhhcc---ceEEEEeecCCChHHHHHcCC--C--CCCeEEEEccCCcccccccccChhhHHHHHHHHHhhhh
Q 013319 345 IIWRVLSGMYHER---LNFYDTEVHDVSDPAVKKLGV--D--ALPAIVGWLSNGEKDVLKTGISVKDQKSSIHELSKLLD 417 (445)
Q Consensus 345 ~~~~~lA~~~~~~---~~f~~~~v~~~~~~l~~~f~V--~--~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 417 (445)
..++.+|..|+++ +.|+.+... ....+++.||+ + .+|+|+++...+..-.+.+..+.+. +.+.++++
T Consensus 153 ~~~~~vA~~~~~k~~~~~F~~~d~~-~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~~-----~~i~~F~~ 226 (252)
T 2h8l_A 153 NRVMMVAKKFLDAGHKLNFAVASRK-TFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDG-----KALERFLQ 226 (252)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETT-TTHHHHGGGTCCCCSCSSCEEEEECTTSCEEECCSCCCTTS-----HHHHHHHH
T ss_pred HHHHHHHHHccccCceEEEEEEchH-HHHHHHHHcCCCCccCCCCEEEEEeCcCcEecCCcccCcch-----HHHHHHHH
Confidence 4677799999987 889777644 45668999999 3 4899998754333223444455544 01344444
Q ss_pred hhhhcccccccCCCccchhcc
Q 013319 418 GLKKRTKRQLPHGLANHIVIQ 438 (445)
Q Consensus 418 ~~~~~n~~~~~~~l~~~~~~~ 438 (445)
+++.- .+.|.|.++++|+
T Consensus 227 ~~~~G---kl~~~~kSe~iPe 244 (252)
T 2h8l_A 227 DYFDG---NLKRYLKSEPIPE 244 (252)
T ss_dssp HHHHT---CSCCCC-------
T ss_pred HHHCC---CccccccCCCCCC
Confidence 44422 2355666666663
No 148
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.33 E-value=2.1e-13 Score=111.07 Aligned_cols=74 Identities=12% Similarity=0.135 Sum_probs=63.1
Q ss_pred cEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc------cchhhHhHhCCccCCCcEEEEeccCCCCCCCee
Q 013319 218 MTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE------TEASLCKELGVHRPRSPRIFAYSYKAGDKGSLV 290 (445)
Q Consensus 218 ~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~------~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~ 290 (445)
++.+|.||||||++|+. .|.|+++++++. .|||+ +++.+|++|+|+++ ||+++ +|+
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~--PT~~i-------~G~-- 75 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSY--PTWII-------NGR-- 75 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSS--SEEEE-------TTE--
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEe--CEEEE-------CCE--
Confidence 45799999999999999 999999997764 67887 67899999999999 99777 232
Q ss_pred eecCcccHHHHHHHHHhh
Q 013319 291 EYNEHLVAKNLKSFCRDH 308 (445)
Q Consensus 291 ~y~g~~~~~~l~~fi~~~ 308 (445)
.|.|.++.++|.+|+.-.
T Consensus 76 ~~~G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 76 TYTGVRSLEALAVASGYP 93 (106)
T ss_dssp EEESCCCHHHHHHHHTCC
T ss_pred EecCCCCHHHHHHHhCCc
Confidence 489999999999998643
No 149
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.29 E-value=1.9e-12 Score=114.47 Aligned_cols=104 Identities=10% Similarity=0.100 Sum_probs=80.2
Q ss_pred ccccChhhHHHHhh---cCCcEEEEEEECCCCccCCC-hhHH---HHHHHHhcCccEEEEEeCccchhh-----------
Q 013319 201 IRALNLQVFKKEIV---EKGMTWLLFFYSPSSNRDGY-ESVI---EEVANSMEGALKVGSINCETEASL----------- 262 (445)
Q Consensus 201 V~~Lt~~~f~~~v~---~~~~~~lV~Fyap~C~~C~~-~p~~---~~~a~~l~~~v~~~~Vdc~~~~~l----------- 262 (445)
+..++..+|++.+. ..++++||.|||+||++|+. .+.+ .++.+.++..+.++.||++++..+
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGT 107 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTE
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcch
Confidence 34455566655543 56789999999999999999 5555 677777766799999999987655
Q ss_pred ---------------HhHhCCccCCCcEEEEeccCCCCCCCee-eecCccc-HHHHHHHHHhhCC
Q 013319 263 ---------------CKELGVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLV-AKNLKSFCRDHLP 310 (445)
Q Consensus 263 ---------------c~~~~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~-~~~l~~fi~~~lp 310 (445)
+++|+|.++ ||++++. .+|+.+ .+.|..+ .+++.+++.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~--Pt~~lid----~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 108 ERTLRTVGDKWSYLQRVKFGANAQ--PFYVLID----NEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCCS--SEEEEEC----TTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHcCCCCc--ceEEEEC----CCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 789999999 9999993 345443 4678887 8999999987653
No 150
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.28 E-value=6e-12 Score=105.88 Aligned_cols=87 Identities=16% Similarity=0.220 Sum_probs=76.0
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCcc----------------------chhhHhHhCCccCC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCET----------------------EASLCKELGVHRPR 272 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~----------------------~~~lc~~~~I~~~~ 272 (445)
.+++++|.||++||++|+. .|.++++++++. .+.+..|+++. +..++++|+|.++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~- 100 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQ- 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSS-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCC-
Confidence 4568999999999999999 999999999998 89999999987 6789999999999
Q ss_pred CcEEEEeccCCCCCCCeeeec---CcccHHHHHHHHHhhC
Q 013319 273 SPRIFAYSYKAGDKGSLVEYN---EHLVAKNLKSFCRDHL 309 (445)
Q Consensus 273 ~Pti~~f~~~~~~~g~~~~y~---g~~~~~~l~~fi~~~l 309 (445)
|+++++. .+|+...+. |..+.++|.+++.+.+
T Consensus 101 -P~~~lid----~~G~i~~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 101 -PAFVFYR----ADGTSTFVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp -SEEEEEC----TTSCEEEECCSSSCCCHHHHHHHHHHC-
T ss_pred -CEEEEEC----CCCcEEEEEcCCCccCHHHHHHHHHHHh
Confidence 9999993 356655788 8889999999998764
No 151
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.28 E-value=4.5e-10 Score=105.57 Aligned_cols=214 Identities=12% Similarity=0.078 Sum_probs=140.8
Q ss_pred cccccC-hhhHHHHhhcC-CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEE
Q 013319 200 NIRALN-LQVFKKEIVEK-GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRI 276 (445)
Q Consensus 200 ~V~~Lt-~~~f~~~v~~~-~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti 276 (445)
.|.+|+ .+++++.+ +. +++|+|-|++++ |.. .+.|.++|+.+.+.+.|+.+. +..+++++++.. |+|
T Consensus 7 ~v~~l~s~~~~~~~~-~~~~~v~vVgff~~~---~~~~~~~F~~~A~~lr~~~~F~~t~---~~~v~~~~~v~~---p~i 76 (250)
T 3ec3_A 7 PSKEILTLKQVQEFL-KDGDDVVILGVFQGV---GDPGYLQYQDAANTLREDYKFHHTF---STEIAKFLKVSL---GKL 76 (250)
T ss_dssp SSEECCCHHHHHHHH-HHCSSCEEEEECSCT---TCHHHHHHHHHHHHHTTTCCEEEEC---CHHHHHHHTCCS---SEE
T ss_pred CceecCCHHHHHHHH-hcCCCeEEEEEEcCC---CchHHHHHHHHHHhhhcCcEEEEEC---cHHHHHHcCCCC---CeE
Confidence 367774 47786654 44 678999999987 557 899999999999999999874 678899999875 999
Q ss_pred EEeccCCC---CCCCeeeec--CcccHHHHHHHHHhhCCCCceeccccccchhhhccCCCCEEEEEecCC---C------
Q 013319 277 FAYSYKAG---DKGSLVEYN--EHLVAKNLKSFCRDHLPRFSKRISLNRIEFTFDAKARLPSVLLLSTKK---E------ 342 (445)
Q Consensus 277 ~~f~~~~~---~~g~~~~y~--g~~~~~~l~~fi~~~lp~~~~~i~~~~~~~~~~~~~~~~~vvlF~~~~---~------ 342 (445)
++|..... -....+.|. |..+.++|.+||..+.-+.+..++.++..... ...+.+++|.... .
T Consensus 77 vlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~---~~~~l~~~~~~~d~~~~~~~~~~ 153 (250)
T 3ec3_A 77 VLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRY---SKRPLVVVYYSVDFSFDYRTATQ 153 (250)
T ss_dssp EEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHS---CSSSEEEEEECCCCSTTTHHHHH
T ss_pred EEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhh---ccCccEEEEEecccccccchhHH
Confidence 99953210 123457788 47889999999998876777777766544333 2457777666321 1
Q ss_pred -ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCC--C-CeEEEEccCCcccccc-cccChhhHHHHHHHHHhhhh
Q 013319 343 -TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDA--L-PAIVGWLSNGEKDVLK-TGISVKDQKSSIHELSKLLD 417 (445)
Q Consensus 343 -~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~--~-Ptlv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 417 (445)
....++.+|..|+ ++.|+.+... .....++.||++. . |.++++..++..-.+. +..+.+ .+.++++
T Consensus 154 ~~~~~~~~vAk~~k-ki~F~~~d~~-~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t~~-------~i~~Fv~ 224 (250)
T 3ec3_A 154 FWRNKVLEVAKDFP-EYTFAIADEE-DYATEVKDLGLSESGGDVNAAILDESGKKFAMEPEEFDSD-------ALREFVM 224 (250)
T ss_dssp HHHHHHHHHHTTCT-TSEEEEEETT-TTHHHHHHTTCSSCSCSCEEEEECTTSCEEECCCCSCCHH-------HHHHHHH
T ss_pred HHHHHHHHHHHhhc-ceeEEEEcHH-HHHHHHHHcCCCccCCCcEEEEEcCCCceecCCcccCCHH-------HHHHHHH
Confidence 2456888999999 8999776543 3466788999975 4 4666554333222232 334444 4555566
Q ss_pred hhhhcccccccCCCccchhcc
Q 013319 418 GLKKRTKRQLPHGLANHIVIQ 438 (445)
Q Consensus 418 ~~~~~n~~~~~~~l~~~~~~~ 438 (445)
+++.- .+.|.+.++++|+
T Consensus 225 ~~~~G---kl~p~~kSepiPe 242 (250)
T 3ec3_A 225 AFKKG---KLKPVIKSQPVPK 242 (250)
T ss_dssp HHHTT---CCCCCC-------
T ss_pred HHHCC---CccceeecCCCCC
Confidence 66533 2567777777774
No 152
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.26 E-value=8.3e-12 Score=101.36 Aligned_cols=95 Identities=14% Similarity=0.158 Sum_probs=76.5
Q ss_pred cccc-ChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchh----hHhHhCCcc-CCC
Q 013319 201 IRAL-NLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEAS----LCKELGVHR-PRS 273 (445)
Q Consensus 201 V~~L-t~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~----lc~~~~I~~-~~~ 273 (445)
...| |.++|++.+ +++.+++|.|+|.||+.|+. .|.++++++. +.+.++.||+++++. ++.+++|+. .
T Consensus 8 ~~~i~s~e~f~~ii-~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~s-- 82 (112)
T 3iv4_A 8 AIKLSSIDQFEQVI-EENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHES-- 82 (112)
T ss_dssp EEECCSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCS--
T ss_pred eeecCCHHHHHHHH-hcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCC--
Confidence 4555 567787654 45889999999999999999 9999999985 579999999999976 799999994 8
Q ss_pred cEEEEeccCCCCCCCeee--ecCcccHHHHHHHH
Q 013319 274 PRIFAYSYKAGDKGSLVE--YNEHLVAKNLKSFC 305 (445)
Q Consensus 274 Pti~~f~~~~~~~g~~~~--y~g~~~~~~l~~fi 305 (445)
||+++| ++|+.+. -.+..+.++|.+.+
T Consensus 83 Pq~il~-----k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 83 PQAFYF-----VNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp SEEEEE-----ETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CeEEEE-----ECCEEEEEeeccccCHHHHHHhh
Confidence 999999 4565544 34566777777654
No 153
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.26 E-value=1.2e-11 Score=103.79 Aligned_cols=102 Identities=17% Similarity=0.197 Sum_probs=81.0
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCcc---------------------
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCET--------------------- 258 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~--------------------- 258 (445)
+..++.+.+.... -.+++++|.||++||++|+. .|.++++++++. .+.+..|+++.
T Consensus 10 ~~~~~g~~~~l~~-~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (136)
T 1zzo_A 10 AKTLDGHDFHGES-LLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLA 87 (136)
T ss_dssp EEBTTSCEEEGGG-GTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEE
T ss_pred cccCCCCEeeHHH-hCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEE
Confidence 3444444443222 24568999999999999999 999999999998 79999999954
Q ss_pred --chhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCC
Q 013319 259 --EASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 259 --~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp 310 (445)
+..++++|+|.++ |+++++. .+|+.+.+.|..+.++|.+++.+.+.
T Consensus 88 d~~~~~~~~~~i~~~--P~~~~id----~~g~i~~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 88 DTDGSVWANFGVTQQ--PAYAFVD----PHGNVDVVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp CTTCHHHHHTTCCSS--SEEEEEC----TTCCEEEEESCCCHHHHHHHHHHHC-
T ss_pred cCCcHHHHHcCCCCC--ceEEEEC----CCCCEEEEecCCCHHHHHHHHHHHhc
Confidence 5678999999999 9999993 35665578898899999999988764
No 154
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.91 E-value=5e-13 Score=112.37 Aligned_cols=93 Identities=13% Similarity=0.124 Sum_probs=77.3
Q ss_pred hhcCCcEEEEEEECCCCccCCC-hhHH---HHHHHHhcCccEEEEEeCc--cchhhHhHhCCccCCCcEEEEeccCCCCC
Q 013319 213 IVEKGMTWLLFFYSPSSNRDGY-ESVI---EEVANSMEGALKVGSINCE--TEASLCKELGVHRPRSPRIFAYSYKAGDK 286 (445)
Q Consensus 213 v~~~~~~~lV~Fyap~C~~C~~-~p~~---~~~a~~l~~~v~~~~Vdc~--~~~~lc~~~~I~~~~~Pti~~f~~~~~~~ 286 (445)
....++++||.||++||++|+. .|.+ +++++.+...+.++.||++ ++..++++|+|.++ ||+++|.. .+
T Consensus 15 ~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~--Pt~~~~d~---~~ 89 (130)
T 2lst_A 15 AQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGT--PTFVFLVP---KA 89 (130)
Confidence 3455678999999999999999 9999 9999988878999999995 56889999999999 99999932 13
Q ss_pred CCe---eeecCcccHHHHHHHHHhhCC
Q 013319 287 GSL---VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 287 g~~---~~y~g~~~~~~l~~fi~~~lp 310 (445)
|+. ..+.|..+.+.|.+++.+.+.
T Consensus 90 G~~~~~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 90 GAWEEVGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 443 458888888999999987664
No 155
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.26 E-value=2.4e-12 Score=113.27 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=75.0
Q ss_pred hhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchh-hHhHhCC--ccCCCcEEEEeccC
Q 013319 207 QVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEAS-LCKELGV--HRPRSPRIFAYSYK 282 (445)
Q Consensus 207 ~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~-lc~~~~I--~~~~~Pti~~f~~~ 282 (445)
++|.. +...++++||.||++||++|+. .|.|+++++.....+.|+.|||+.+.. ++..+++ ..+ ||+++|.
T Consensus 37 ~~~~~-~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~--Pt~~~~d-- 111 (164)
T 1sen_A 37 DGKKE-AAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYI--PRILFLD-- 111 (164)
T ss_dssp HHHHH-HHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCS--SEEEEEC--
T ss_pred HHHHH-HHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcC--CeEEEEC--
Confidence 55644 4456778999999999999999 999999887766568899999998877 8999998 558 9999993
Q ss_pred CCCCCCee-eecCc----------ccHHHHHHHHHhhCC
Q 013319 283 AGDKGSLV-EYNEH----------LVAKNLKSFCRDHLP 310 (445)
Q Consensus 283 ~~~~g~~~-~y~g~----------~~~~~l~~fi~~~lp 310 (445)
.+|+.+ .+.|. .+.++|.++|.+.+.
T Consensus 112 --~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 112 --PSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp --TTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred --CCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 234333 24553 577889888887653
No 156
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.25 E-value=1.1e-11 Score=94.02 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=62.5
Q ss_pred EEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCcc-cH
Q 013319 221 LLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHL-VA 298 (445)
Q Consensus 221 lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~-~~ 298 (445)
.|.||++||++|+. .|.++++++++...+.+..|| +.+++++|+|.++ ||+++ +|+.+.. |.. +.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~--Pt~~~-------~G~~~~~-G~~~~~ 69 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTAL--PGLAV-------DGELKIM-GRVASK 69 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSS--SCEEE-------TTEEEEC-SSCCCH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcC--CEEEE-------CCEEEEc-CCCCCH
Confidence 58999999999999 999999999998889999998 7899999999999 99988 2444444 886 88
Q ss_pred HHHHHHH
Q 013319 299 KNLKSFC 305 (445)
Q Consensus 299 ~~l~~fi 305 (445)
++|.+++
T Consensus 70 ~~l~~~l 76 (77)
T 1ilo_A 70 EEIKKIL 76 (77)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8888875
No 157
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.18 E-value=5.8e-11 Score=101.20 Aligned_cols=101 Identities=17% Similarity=0.174 Sum_probs=80.4
Q ss_pred ccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc------------------------
Q 013319 203 ALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE------------------------ 257 (445)
Q Consensus 203 ~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~------------------------ 257 (445)
.++.+.+.... -.++++||.||++||++|+. .|.++++++++.+.+.+..|+++
T Consensus 16 ~~~g~~~~~~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (148)
T 2b5x_A 16 WLNGEVTREQL-IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPI 94 (148)
T ss_dssp EESCCCCHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCE
T ss_pred cccCcccchhh-cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcce
Confidence 44555553322 24578999999999999999 99999999999877999999964
Q ss_pred ---cchhhHhHhCCccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCC
Q 013319 258 ---TEASLCKELGVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 258 ---~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp 310 (445)
.+..+++.|+|.++ |+++++. .+|+.+ .+.|..+.++|.++|.+.+.
T Consensus 95 ~~d~~~~~~~~~~v~~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 95 FVDSDHALTDAFENEYV--PAYYVFD----KTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp EECSSCHHHHHTCCCCS--SEEEEEC----TTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred EECCchhHHHHhCCCCC--CEEEEEC----CCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 45689999999999 9999992 356544 47788888999999987764
No 158
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.17 E-value=8.5e-11 Score=102.39 Aligned_cols=104 Identities=12% Similarity=0.142 Sum_probs=82.1
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccchhhHhHh------------
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETEASLCKEL------------ 266 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~~~lc~~~------------ 266 (445)
+.+++.+.+... .-.++++||.||++||++|+. .|.+.++++++.. .+.+..|+++.+...++++
T Consensus 19 l~~~~g~~~~l~-~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 97 (165)
T 3or5_A 19 GVTVDGKPFSSA-SLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMM 97 (165)
T ss_dssp EECTTSCEEEGG-GGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEE
T ss_pred eeCCCCCEechh-HcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEe
Confidence 444444444222 224578999999999999999 9999999999987 4999999999987777776
Q ss_pred ---------------CCccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCCC
Q 013319 267 ---------------GVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 267 ---------------~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp~ 311 (445)
+|.++ |+++++. .+|+++ .+.|..+.++|.++|.+.+..
T Consensus 98 ~~~~~~~~~~~~~~~~i~~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 98 ATPELIRAFNGYIDGGITGI--PTSFVID----ASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp CCHHHHHHHHTTSTTCSCSS--SEEEEEC----TTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred cCHHHHHHHhhhhccCCCCC--CeEEEEC----CCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 89999 9999982 456554 477888899999999987753
No 159
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.17 E-value=3e-11 Score=102.64 Aligned_cols=84 Identities=19% Similarity=0.269 Sum_probs=72.9
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhc-CccEEEEEeCcc-------------------------chhhHhHhCC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSME-GALKVGSINCET-------------------------EASLCKELGV 268 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~-~~v~~~~Vdc~~-------------------------~~~lc~~~~I 268 (445)
.++++||.||++||++|+. .|.++++++++. ..+.+..|+++. +..+++.|+|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 5679999999999999999 999999999998 479999999965 5689999999
Q ss_pred ccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHH
Q 013319 269 HRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFC 305 (445)
Q Consensus 269 ~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi 305 (445)
.++ |+++++. .+|+++ .+.|..+.++|.++|
T Consensus 113 ~~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 113 ITI--PTSFLLN----EKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CEE--SEEEEEC----TTCCEEEEEESCCCHHHHHHHH
T ss_pred Ccc--CeEEEEc----CCCcEEEEEcCCcCHHHHHHhh
Confidence 999 9999992 456554 588988999998876
No 160
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.17 E-value=4.1e-11 Score=104.11 Aligned_cols=89 Identities=15% Similarity=0.058 Sum_probs=73.3
Q ss_pred cCCcEEEEEEE-CCCCccCCC-hhHH---HHHHHHhcCccEEEEEeCccch-----------hhHhHhCCccCCCcEEEE
Q 013319 215 EKGMTWLLFFY-SPSSNRDGY-ESVI---EEVANSMEGALKVGSINCETEA-----------SLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 215 ~~~~~~lV~Fy-ap~C~~C~~-~p~~---~~~a~~l~~~v~~~~Vdc~~~~-----------~lc~~~~I~~~~~Pti~~ 278 (445)
..++++||.|| ++||++|+. .|.+ .++++.+...+.++.||++... .++++|+|.++ ||+++
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~--Pt~~~ 122 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGF--PELVF 122 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSS--SEEEE
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCC--CEEEE
Confidence 44678999999 999999999 9999 7887766567899999998754 89999999999 99999
Q ss_pred eccCCCCCCCeee-ecCcc--cHHHHHHHHHhhCC
Q 013319 279 YSYKAGDKGSLVE-YNEHL--VAKNLKSFCRDHLP 310 (445)
Q Consensus 279 f~~~~~~~g~~~~-y~g~~--~~~~l~~fi~~~lp 310 (445)
+. .+|+.+. + |.. +.++|.+++.+.+.
T Consensus 123 ~d----~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 123 ID----AEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp EC----TTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred Ec----CCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 93 3565444 5 877 78999999987654
No 161
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.14 E-value=2.8e-10 Score=96.97 Aligned_cols=87 Identities=8% Similarity=0.085 Sum_probs=71.4
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCc-cEEEEEeCccchh-------------------------hHhHhCC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGA-LKVGSINCETEAS-------------------------LCKELGV 268 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~-v~~~~Vdc~~~~~-------------------------lc~~~~I 268 (445)
.++++||.||++||++|+. .|.+.++++++... +.+..|+++.+.. +++.|+|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 4578999999999999999 99999999999874 9999999997766 9999999
Q ss_pred ccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhh
Q 013319 269 HRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDH 308 (445)
Q Consensus 269 ~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~ 308 (445)
.++ |+++++. .+|.++ .+.|..+.+++.+.+.+.
T Consensus 110 ~~~--P~~~lid----~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 110 YAT--PVLYVLD----KNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp CSS--CEEEEEC----TTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred CCC--CEEEEEC----CCCcEEEecCCHHHHHHHHHHHHHH
Confidence 999 9999992 355544 466766666666666543
No 162
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.11 E-value=2.6e-11 Score=99.65 Aligned_cols=82 Identities=12% Similarity=0.005 Sum_probs=64.9
Q ss_pred cEEEEEEECCCCccCCC-hhHHHHHHHHhcC-----ccEEEEEeCccc--hhhHhHhCCccCCCcEEEEeccCCCCCCC-
Q 013319 218 MTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-----ALKVGSINCETE--ASLCKELGVHRPRSPRIFAYSYKAGDKGS- 288 (445)
Q Consensus 218 ~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-----~v~~~~Vdc~~~--~~lc~~~~I~~~~~Pti~~f~~~~~~~g~- 288 (445)
...||+|||+||++|+. .+. ++..+.. .+.+.+||++++ ..++.+++|.+. |||++|. +|+
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~---i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~--PT~i~f~-----~G~e 88 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAE---IAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFT--PTFVLMA-----GDVE 88 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHH---TTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSS--SEEEEEE-----TTEE
T ss_pred CCEEEEEECCCCHHHHHHHHH---HHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCC--CEEEEEE-----CCEE
Confidence 47999999999999998 653 3333333 278899999886 578999999999 9999993 453
Q ss_pred eeeecCcccHHHHHHHHHhhC
Q 013319 289 LVEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 289 ~~~y~g~~~~~~l~~fi~~~l 309 (445)
+....|....+.+..|+.+.+
T Consensus 89 v~Ri~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 89 SGRLEGYPGEDFFWPMLARLI 109 (116)
T ss_dssp EEEEECCCCHHHHHHHHHHHH
T ss_pred EeeecCCCCHHHHHHHHHHHH
Confidence 445889989999999997654
No 163
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.10 E-value=2.8e-10 Score=97.70 Aligned_cols=90 Identities=11% Similarity=0.175 Sum_probs=76.4
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccch-----------------------hhHhHhCCcc
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETEA-----------------------SLCKELGVHR 270 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~~-----------------------~lc~~~~I~~ 270 (445)
.++++||.||++||++|+. .|.++++++++.+ .+.+..|+++.+. .+++.|+|.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 3568999999999999999 9999999999987 5999999998865 7899999999
Q ss_pred CCCcEEEEeccCCCCCCCeee-ecCcccHHHHHHHHHhhCCC
Q 013319 271 PRSPRIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 271 ~~~Pti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~lp~ 311 (445)
+ |+++++. .+|+++. +.|..+.++|.++|.+.+.+
T Consensus 109 ~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 109 I--PRFILLD----RDGKIISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp S--CCEEEEC----TTSCEEESSCCCTTCHHHHHHHHHHHTC
T ss_pred C--CEEEEEC----CCCeEEEccCCCCCHHHHHHHHHHHhcc
Confidence 9 9999993 3565544 56777889999999887654
No 164
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.10 E-value=7.7e-11 Score=102.64 Aligned_cols=105 Identities=9% Similarity=0.069 Sum_probs=79.9
Q ss_pred cccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeC---------------------
Q 013319 200 NIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINC--------------------- 256 (445)
Q Consensus 200 ~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc--------------------- 256 (445)
.+.+++.+.+.. ....++++||.||++||++|+. .|.+++++++++. .+.|..|++
T Consensus 22 ~l~~~~g~~~~~-~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 100 (164)
T 2h30_A 22 TMKTADNRPASV-YLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNY 100 (164)
T ss_dssp TCEETTSSBGGG-GCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCC
T ss_pred ccCCCCCCEeeH-HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCC
Confidence 355666665532 2335678999999999999999 9999999998753 466655553
Q ss_pred -------ccchhhHhHhCCccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCCC
Q 013319 257 -------ETEASLCKELGVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 257 -------~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp~ 311 (445)
+.+..++++|+|.++ |+++++. .+|+.+ .+.|..+.++|.++|.+.+..
T Consensus 101 ~~~~~~~d~~~~~~~~~~v~~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 101 PKLPVVTDNGGTIAQNLNISVY--PSWALIG----KDGDVQRIVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp TTSCEEECTTCHHHHHTTCCSS--SEEEEEC----TTSCEEEEEESCCCHHHHHHHHHCTTCC
T ss_pred CcceEEEcCchHHHHHcCCCcc--ceEEEEC----CCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 445688999999999 9999982 355544 477888999999999987653
No 165
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.09 E-value=9.8e-11 Score=103.19 Aligned_cols=88 Identities=7% Similarity=-0.090 Sum_probs=68.8
Q ss_pred cccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhC---CccCCCcEEE
Q 013319 202 RALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELG---VHRPRSPRIF 277 (445)
Q Consensus 202 ~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~---I~~~~~Pti~ 277 (445)
..++++.+.....-++++++|.|||+||++|+. .|.++++++.+. .+.|..||.++++.++.+|. |.++ ||++
T Consensus 39 ~~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~i--Pt~i 115 (167)
T 1z6n_A 39 NGLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAI--PLVL 115 (167)
T ss_dssp HCCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCS--SEEE
T ss_pred cCCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCc--CeEE
Confidence 456666664432224578999999999999999 999999999874 69999999999999999887 9999 9999
Q ss_pred EeccCCCCCCCeeeecCcc
Q 013319 278 AYSYKAGDKGSLVEYNEHL 296 (445)
Q Consensus 278 ~f~~~~~~~g~~~~y~g~~ 296 (445)
+|. .+|+.+...|.+
T Consensus 116 ~~~----~~G~~~~~~g~~ 130 (167)
T 1z6n_A 116 VLD----EEFNLLGRFVER 130 (167)
T ss_dssp EEC----TTCCEEEEEESS
T ss_pred EEC----CCCCEEEEEcCC
Confidence 993 234554433543
No 166
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.09 E-value=3.4e-10 Score=96.42 Aligned_cols=87 Identities=11% Similarity=0.205 Sum_probs=71.1
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHh-cC-ccEEEEEeCccc-------------------------hhhHhHhC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSM-EG-ALKVGSINCETE-------------------------ASLCKELG 267 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l-~~-~v~~~~Vdc~~~-------------------------~~lc~~~~ 267 (445)
.++++||.||++||++|+. .|.+.++++++ .+ .+.+..|+++.. ..+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4578999999999999999 99999999999 66 499999998874 48899999
Q ss_pred CccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCC
Q 013319 268 VHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 268 I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp 310 (445)
|.++ |+++++. .+|+.+... . +.++|.+++.+.+.
T Consensus 112 v~~~--P~~~lid----~~G~i~~~~-~-~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 112 ILTL--PTNILLS----PTGKILARD-I-QGEALTGKLKELLK 146 (148)
T ss_dssp CCSS--SEEEEEC----TTSBEEEES-C-CHHHHHHHHHHHC-
T ss_pred CCCc--CEEEEEC----CCCeEEEec-C-CHHHHHHHHHHHHc
Confidence 9999 9999982 355544322 2 77888888887664
No 167
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.08 E-value=2.5e-10 Score=98.05 Aligned_cols=90 Identities=12% Similarity=0.182 Sum_probs=76.8
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc----------------------hhhHhHhCCccC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE----------------------ASLCKELGVHRP 271 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~----------------------~~lc~~~~I~~~ 271 (445)
.++++||.||++||++|+. .|.++++++++.. .+.+..|+++.. ..+++.|+|.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 4568999999999999999 9999999999986 699999999763 478999999999
Q ss_pred CCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCCC
Q 013319 272 RSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 272 ~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp~ 311 (445)
|+++++. .+|+++ .+.|..+.+.|.+++.+.+..
T Consensus 105 --P~~~lid----~~G~i~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 105 --PTTFLIN----PEGKVVKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp --CEEEEEC----TTSEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred --CeEEEEC----CCCcEEEEEeCCCCHHHHHHHHHHHHhh
Confidence 9999982 355544 477888999999999988874
No 168
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.08 E-value=3e-10 Score=101.15 Aligned_cols=88 Identities=8% Similarity=0.098 Sum_probs=71.6
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCc-c------EEEEEeCcc-chhhHhHh--------------------
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGA-L------KVGSINCET-EASLCKEL-------------------- 266 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~-v------~~~~Vdc~~-~~~lc~~~-------------------- 266 (445)
.++++||.||++||++|+. .|.+.++++++... + .|..|+++. ++..++++
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 4578999999999999999 99999999999764 7 999999998 66666655
Q ss_pred -----CCccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 267 -----GVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 267 -----~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
+|..+ |+++++. .+|+++ .+.|..+.++|.++|.+.+
T Consensus 138 ~~~~~~v~~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 138 SLGGVPASVI--PTTIVLD----KQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GTTTCCTTCC--SEEEEEC----TTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred HhccCCCCCC--CeEEEEC----CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 67888 9877772 456554 4788888999999998764
No 169
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.08 E-value=2.2e-10 Score=98.58 Aligned_cols=90 Identities=11% Similarity=0.083 Sum_probs=74.7
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc------------------------chhhHhHhC--
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET------------------------EASLCKELG-- 267 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~------------------------~~~lc~~~~-- 267 (445)
.++++||.||++||++|+. .|.+++++++++. .+.+..|+++. ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 4578999999999999999 9999999999965 79999999973 345778899
Q ss_pred CccCCCcEEEEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCCC
Q 013319 268 VHRPRSPRIFAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 268 I~~~~~Pti~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp~ 311 (445)
|.++ |+++++. .+|++ ..+.|..+.++|.++|.+....
T Consensus 103 v~~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 103 VGVL--PFTVVEA----PKCGYRQTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp SCCS--SEEEEEE----TTTTEEEECCSCCCHHHHHHHHHHHHTC
T ss_pred cCCC--CEEEEEC----CCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 8999 9999983 34554 4588999999999999876553
No 170
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.07 E-value=1.2e-10 Score=94.36 Aligned_cols=76 Identities=11% Similarity=0.120 Sum_probs=66.4
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCccc
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLV 297 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~ 297 (445)
..|+.|+++||+.|+. .|.+++++.++. +.+..||+++++++..+|+++ + |+|++| .+|+.+ ..|..+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-V--P~l~~~-----~dG~~v-~~g~~~ 98 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-V--PVLFAV-----NEDKEL-CHYFLD 98 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-C--SEEEET-----TTTEEE-ECSSCC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-C--ceEEEE-----ECCEEE-EecCCC
Confidence 4689999999999999 999999999874 899999999999999999997 8 999998 456554 457778
Q ss_pred HHHHHHHH
Q 013319 298 AKNLKSFC 305 (445)
Q Consensus 298 ~~~l~~fi 305 (445)
.++|.+||
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 88998887
No 171
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.04 E-value=4.2e-10 Score=96.70 Aligned_cols=89 Identities=17% Similarity=0.174 Sum_probs=73.8
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeC-----------------------ccchhhHhHhCCcc
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINC-----------------------ETEASLCKELGVHR 270 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc-----------------------~~~~~lc~~~~I~~ 270 (445)
.++++||.||++||++|+. .|.+.++++++.. .+.+..|++ +.+..+++.|+|..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 4578999999999999999 9999999999986 488877763 45678999999999
Q ss_pred CCCcEEEEeccCCCCCCCe-eeecCcccHHHHHHHHHhhCC
Q 013319 271 PRSPRIFAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 271 ~~~Pti~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~lp 310 (445)
+ |+++++. .+|++ ..+.|..+.+.|.++|.+.+.
T Consensus 107 ~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 107 Y--PTSVLIG----KKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp S--SEEEEEC----SSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred c--CeEEEEC----CCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 9 9999983 34543 458888889999999987765
No 172
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.03 E-value=4.5e-10 Score=98.06 Aligned_cols=86 Identities=14% Similarity=0.190 Sum_probs=73.4
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc------------------cch----------------
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE------------------TEA---------------- 260 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~------------------~~~---------------- 260 (445)
.++++||.||++||++|+. .|.+.++++++. .+.|..|+++ ...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 4578999999999999999 999999999998 8999999998 442
Q ss_pred ------hhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCcc-cHHHHHHHHHhhC
Q 013319 261 ------SLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHL-VAKNLKSFCRDHL 309 (445)
Q Consensus 261 ------~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~-~~~~l~~fi~~~l 309 (445)
.+++.|+|.++ |+++++. .+|+++. .|.. +.+.|.++|.+.+
T Consensus 115 ~~~d~~~~~~~~~v~~~--P~~~lid----~~G~i~~-~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSI--DYIVIMD----KSSNVLY-AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEECCSHHHHHTTCCSS--SEEEEEE----TTCCEEE-EEESCCHHHHHHHHHHC-
T ss_pred EEeChHHHHHHhCCCCc--eEEEEEc----CCCcEEE-eCCCCCHHHHHHHHHHHh
Confidence 78899999999 9999993 4566666 8888 8899999988754
No 173
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.03 E-value=4.2e-10 Score=94.10 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=71.9
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC----------------------------ccchhhHhHh
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC----------------------------ETEASLCKEL 266 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc----------------------------~~~~~lc~~~ 266 (445)
.++++||.||++||++|+. .|.++++++++...+.+..|++ +.+..+++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 4578999999999999999 9999999999777889988864 3345789999
Q ss_pred CCccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHh
Q 013319 267 GVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRD 307 (445)
Q Consensus 267 ~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~ 307 (445)
+|.++ |+++++. .+|+.+ .+.|..+.++|.+++.+
T Consensus 101 ~v~~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 GVRSY--PTQAFID----KEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp TCCSS--SEEEEEC----TTCCEEEEEESCCCHHHHHHHHHH
T ss_pred CcccC--CeEEEEC----CCCcEEEeecCCCcHHHHHHHHHh
Confidence 99999 9999993 456544 57888889999998875
No 174
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.02 E-value=3.1e-10 Score=97.74 Aligned_cols=86 Identities=12% Similarity=0.073 Sum_probs=74.6
Q ss_pred cEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC---------------------------ccchhhHhHhCCc
Q 013319 218 MTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC---------------------------ETEASLCKELGVH 269 (445)
Q Consensus 218 ~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc---------------------------~~~~~lc~~~~I~ 269 (445)
+++||.||++||++|+. .|.+.++++++ .+.+..|++ +....+++.|+|.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 67999999999999999 99999999999 789999999 4667899999999
Q ss_pred cCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCCC
Q 013319 270 RPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLPR 311 (445)
Q Consensus 270 ~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp~ 311 (445)
++ |+++++. .+|+++ .+.|..+.++|.++|.+...+
T Consensus 109 ~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 109 GQ--PWTFVVD----REGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp SS--CEEEEEC----TTSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred cc--cEEEEEC----CCCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 99 9988882 456544 578888999999999987764
No 175
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.01 E-value=1.1e-08 Score=102.06 Aligned_cols=172 Identities=14% Similarity=0.109 Sum_probs=107.6
Q ss_pred ccccC-hhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEE
Q 013319 201 IRALN-LQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 201 V~~Lt-~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~ 278 (445)
|..++ .++++. + ..+.+++|.||+++|. . .+.|+++|..+.+.+.|+.+.+ +++++++|..+ | +++
T Consensus 120 v~~l~~~~~l~~-l-~~~~~~~v~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~~----~~~~~~~v~~~--p-i~~ 187 (382)
T 2r2j_A 120 IQEIRDLAEITT-L-DRSKRNIIGYFEQKDS---DNYRVFERVANILHDDCAFLSAFG----DVSKPERYSGD--N-IIY 187 (382)
T ss_dssp CEEC--------------CCEEEEEESCSSS---HHHHHHHHHHHHHTTTCEEEEEES----CC--------C--E-EEE
T ss_pred ceecCCHHHHHH-h-cCCCCEEEEEECCCCC---hhHHHHHHHHHHhhccceEEEEeh----hhHHhhCCCCC--c-eEE
Confidence 56664 345765 3 5566799999998643 3 6789999999999899988887 36888999999 9 766
Q ss_pred eccCCCCCCCeeeecCcc-cHHHHHHHHHhhCCCCceeccccccchhhhccCCCCEEEEEecCCCC--hHHH-HH---HH
Q 013319 279 YSYKAGDKGSLVEYNEHL-VAKNLKSFCRDHLPRFSKRISLNRIEFTFDAKARLPSVLLLSTKKET--PIIW-RV---LS 351 (445)
Q Consensus 279 f~~~~~~~g~~~~y~g~~-~~~~l~~fi~~~lp~~~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~~--~~~~-~~---lA 351 (445)
++.+. ......|.|.+ +.++|.+||..+..+.+..++..+.... .....+++++|...... ...| .. +|
T Consensus 188 ~~~~~--~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~--~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 263 (382)
T 2r2j_A 188 KPPGH--SAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEEL--TEEGLPFLILFHMKEDTESLEIFQNEVARQL 263 (382)
T ss_dssp ECSSS--SSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHH--HTTCCCEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred CCCCC--CCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhHHHH--hcCCCcEEEEEecCCchHHHHHHHHHHHHHH
Confidence 64321 23467899998 8899999999776665666665544322 34567788888765432 1223 23 33
Q ss_pred HHhhccceEEEEeecCCChHHHHHcCCC--CCCeEEEEcc
Q 013319 352 GMYHERLNFYDTEVHDVSDPAVKKLGVD--ALPAIVGWLS 389 (445)
Q Consensus 352 ~~~~~~~~f~~~~v~~~~~~l~~~f~V~--~~Ptlv~~~~ 389 (445)
..+++++.|+.+... ....+++.||++ .+|+|+++..
T Consensus 264 ~~~~~~i~f~~id~~-~~~~~~~~~gl~~~~~P~i~i~~~ 302 (382)
T 2r2j_A 264 ISEKGTINFLHADCD-KFRHPLLHIQKTPADCPVIAIDSF 302 (382)
T ss_dssp GGGTTTSEEEEEETT-TTHHHHHHTTCCGGGCSEEEEECS
T ss_pred HHhCCeeEEEEEchH-HhHHHHHHcCCCccCCCEEEEEcc
Confidence 456778889776533 456789999998 4899987654
No 176
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.00 E-value=3.7e-10 Score=98.93 Aligned_cols=97 Identities=14% Similarity=0.230 Sum_probs=73.0
Q ss_pred ChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC-----------------------ccch
Q 013319 205 NLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC-----------------------ETEA 260 (445)
Q Consensus 205 t~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc-----------------------~~~~ 260 (445)
+.+.+.......++++||.||++||++|+. .|.+++++++ .+.+..|++ +.+.
T Consensus 39 ~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 115 (168)
T 2b1k_A 39 PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDG 115 (168)
T ss_dssp TTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTC
T ss_pred CCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcch
Confidence 444443323345678999999999999999 9999999886 577888884 4556
Q ss_pred hhHhHhCCccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCC
Q 013319 261 SLCKELGVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 261 ~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp 310 (445)
.++++|+|.++ |+.+++. .+|+++ .+.|..+.+.|.+++.+.+.
T Consensus 116 ~~~~~~~v~~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 116 MLGLDLGVYGA--PETFLID----GNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp HHHHHHTCCSS--SEEEEEC----TTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred HHHHHcCcccc--CEEEEEC----CCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 78999999999 9766662 456554 47788888888888876543
No 177
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.00 E-value=8.7e-10 Score=94.90 Aligned_cols=87 Identities=13% Similarity=0.181 Sum_probs=69.8
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc-------------------------chhhHhHhCC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET-------------------------EASLCKELGV 268 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~-------------------------~~~lc~~~~I 268 (445)
.++++||.||++||++|+. .|.+.++++++.. .+.+..|+++. +..+++.|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 3568999999999999999 9999999999987 49999999997 5788999999
Q ss_pred ccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCC
Q 013319 269 HRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 269 ~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp 310 (445)
.++ |+++++. .+|+++... .+.++|.+++.+.+.
T Consensus 108 ~~~--P~~~lid----~~G~i~~~~--~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 108 VGF--PHIILVD----PEGKIVAKE--LRGDDLYNTVEKFVN 141 (152)
T ss_dssp CSS--CEEEEEC----TTSEEEEEC--CCTTHHHHHHHHHHT
T ss_pred CcC--CeEEEEC----CCCeEEEee--CCHHHHHHHHHHHHh
Confidence 999 9999982 355544321 244677777766544
No 178
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.99 E-value=1.4e-09 Score=93.38 Aligned_cols=90 Identities=13% Similarity=0.147 Sum_probs=74.0
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccch----------------------hhHhHhCCccC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETEA----------------------SLCKELGVHRP 271 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~~----------------------~lc~~~~I~~~ 271 (445)
.++++||.||++||++|+. .|.+.++++++.. .+.+..|+++.+. .+++.|+|.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 3568999999999999999 9999999999987 4999999999765 68889999999
Q ss_pred CCcEEEEeccCCCCCCCee-eecCcc--cHHHHHHHHHhhCCC
Q 013319 272 RSPRIFAYSYKAGDKGSLV-EYNEHL--VAKNLKSFCRDHLPR 311 (445)
Q Consensus 272 ~~Pti~~f~~~~~~~g~~~-~y~g~~--~~~~l~~fi~~~lp~ 311 (445)
|+++++. .+|+++ .+.|.. +.++|.++|.+.+..
T Consensus 107 --P~~~lid----~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 107 --PTSFLID----RNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp --SEEEEEC----TTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred --CeEEEEC----CCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 9988882 456544 366643 458999999988764
No 179
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.98 E-value=5.6e-10 Score=98.63 Aligned_cols=84 Identities=14% Similarity=0.037 Sum_probs=68.3
Q ss_pred ccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hh-HH--HHHHHHhcCccEEEEEeCccchhhHhHh--------CC
Q 013319 201 IRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ES-VI--EEVANSMEGALKVGSINCETEASLCKEL--------GV 268 (445)
Q Consensus 201 V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p-~~--~~~a~~l~~~v~~~~Vdc~~~~~lc~~~--------~I 268 (445)
-...+++.|+. ....++++||.||++||++|+. +| .| .++++.++..+.+++||+++.+.+++.| +|
T Consensus 24 W~~~~~ea~~~-A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv 102 (173)
T 3ira_A 24 WYPWGEEAFEK-ARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGR 102 (173)
T ss_dssp CBCSSHHHHHH-HHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCcCHHHHHH-HHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCC
Confidence 34556788855 4566789999999999999999 88 45 5788888777889999999999999888 99
Q ss_pred ccCCCcEEEEeccCCCCCCCeee
Q 013319 269 HRPRSPRIFAYSYKAGDKGSLVE 291 (445)
Q Consensus 269 ~~~~~Pti~~f~~~~~~~g~~~~ 291 (445)
.++ ||++++. .+|+++.
T Consensus 103 ~g~--Pt~v~l~----~dG~~v~ 119 (173)
T 3ira_A 103 GGW--PLNIIMT----PGKKPFF 119 (173)
T ss_dssp CCS--SEEEEEC----TTSCEEE
T ss_pred CCC--cceeeEC----CCCCcee
Confidence 999 9999993 3455443
No 180
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.97 E-value=4e-10 Score=87.98 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=61.2
Q ss_pred EEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCcccHH
Q 013319 221 LLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAK 299 (445)
Q Consensus 221 lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~ 299 (445)
++.|++|||+.|+. .|.+++++.++ +.+||++++++++++|+++ + |+|++ . +|+.+. |..+.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-v--Ptl~~-~-----~G~~v~--g~~~~~ 66 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-V--PVLRD-P-----MGRELD--WPFDAP 66 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-C--SEEEC-T-----TCCEEE--SCCCHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-c--CeEEE-E-----CCEEEe--CCCCHH
Confidence 78999999999999 99998876553 6889999999999999998 8 99987 2 354443 777889
Q ss_pred HHHHHHHhhCC
Q 013319 300 NLKSFCRDHLP 310 (445)
Q Consensus 300 ~l~~fi~~~lp 310 (445)
.|.+++.+.+.
T Consensus 67 ~L~~~l~~~~~ 77 (87)
T 1ttz_A 67 RLRAWLDAAPH 77 (87)
T ss_dssp HHHHHHHTCC-
T ss_pred HHHHHHHHHHH
Confidence 99999986554
No 181
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.95 E-value=9.3e-10 Score=93.37 Aligned_cols=86 Identities=17% Similarity=0.301 Sum_probs=68.3
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHH---HHHHhcC-ccEEEEEeCccchhh------------------------HhHh
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEE---VANSMEG-ALKVGSINCETEASL------------------------CKEL 266 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~---~a~~l~~-~v~~~~Vdc~~~~~l------------------------c~~~ 266 (445)
.++++||.||++||++|+. .|.+.+ +.++++. .+.+..|+++.+... ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 4678999999999999999 999998 8888865 599999999876543 4489
Q ss_pred CCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhC
Q 013319 267 GVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 267 ~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~l 309 (445)
+|.++ |+++++. .+|+++. +..+.++|.+++.+..
T Consensus 106 ~v~~~--P~~~lid----~~G~i~~--~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 106 DIRAT--PTIYLLD----GRKRVIL--KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CCCSS--SEEEEEC----TTCBEEE--CSCCHHHHHHHHHC--
T ss_pred CCCCC--CeEEEEC----CCCCEEe--cCCCHHHHHHHHHHHc
Confidence 99999 9999982 3555443 4567899999987653
No 182
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.95 E-value=1.7e-10 Score=110.06 Aligned_cols=74 Identities=14% Similarity=0.158 Sum_probs=60.5
Q ss_pred EEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc------cchhhHhHhCCccCCCcEEEEeccCCCCCCCeeee
Q 013319 220 WLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE------TEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEY 292 (445)
Q Consensus 220 ~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~------~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y 292 (445)
.+|+||||||+||++ +|.|+++|++++ .|||+ +++++|++++|+++ ||+++ +|+ .|
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~v--PT~~i-------~G~--~~ 262 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSY--PTWII-------NGR--TY 262 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCST--TEEEE-------TTE--EE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCccc--CeEEE-------CCE--Ee
Confidence 479999999999999 999999997763 56666 27899999999999 99655 343 49
Q ss_pred cCcccHHHHHHHHHhhCC
Q 013319 293 NEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 293 ~g~~~~~~l~~fi~~~lp 310 (445)
.|.++.++|.+|+.-..+
T Consensus 263 ~G~~~~~~L~~~l~~~~~ 280 (291)
T 3kp9_A 263 TGVRSLEALAVASGYPLE 280 (291)
T ss_dssp ESCCCHHHHHHHTCCCC-
T ss_pred cCCCCHHHHHHHHCCCCc
Confidence 999999999999864433
No 183
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.94 E-value=2e-09 Score=92.57 Aligned_cols=89 Identities=13% Similarity=0.238 Sum_probs=72.0
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc-----------------------hhhHhHhCCcc
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE-----------------------ASLCKELGVHR 270 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~-----------------------~~lc~~~~I~~ 270 (445)
.++++||.||++||++|+. .|.++++++++.+ .+.+..|+++.+ ..+++.|+|.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 4578999999999999999 9999999999987 799999999875 34889999999
Q ss_pred CCCcEEEEeccCCCCCCCeee-ecCcc--cHHHHHHHHHhhCC
Q 013319 271 PRSPRIFAYSYKAGDKGSLVE-YNEHL--VAKNLKSFCRDHLP 310 (445)
Q Consensus 271 ~~~Pti~~f~~~~~~~g~~~~-y~g~~--~~~~l~~fi~~~lp 310 (445)
+ |+++++. .+|+++. +.|.. +.++|.++|.+...
T Consensus 107 ~--P~~~lid----~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 107 V--PETFVID----RHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp B--CEEEEEC----TTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred C--CeEEEEC----CCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 9 9877772 4565543 66764 56789999887544
No 184
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.93 E-value=9.5e-10 Score=94.70 Aligned_cols=85 Identities=18% Similarity=0.262 Sum_probs=68.2
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc-----------------------cchhhHhHhCCccCC
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE-----------------------TEASLCKELGVHRPR 272 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~-----------------------~~~~lc~~~~I~~~~ 272 (445)
++++||.||++||++|+. .|.+++++++ +.+.+..|+++ .+..+++.|+|.++
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~- 118 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV- 118 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS-
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc-
Confidence 568999999999999999 9999999876 56888888864 34578899999999
Q ss_pred CcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 273 SPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 273 ~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
|+++++. .+|+++ .+.|..+.+.|.+++.+.+
T Consensus 119 -P~~~~id----~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 119 -PETFVVG----REGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp -CEEEEEC----TTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred -CeEEEEc----CCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 9877762 456544 4788888888888887654
No 185
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.93 E-value=2.9e-09 Score=92.30 Aligned_cols=88 Identities=18% Similarity=0.249 Sum_probs=71.9
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc-------------------chhhHhHhCCccCCCc
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET-------------------EASLCKELGVHRPRSP 274 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~-------------------~~~lc~~~~I~~~~~P 274 (445)
.++++||.||++||++|+. .|.++++++++.. .+.+..|+++. +..+++.|+|.++ |
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~--P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRL--P 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSS--S
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCc--c
Confidence 4578999999999999999 9999999999984 79999999987 6789999999999 9
Q ss_pred EEEEeccCCCCCCCee-eecCcc--cHHHHHHHHHhhC
Q 013319 275 RIFAYSYKAGDKGSLV-EYNEHL--VAKNLKSFCRDHL 309 (445)
Q Consensus 275 ti~~f~~~~~~~g~~~-~y~g~~--~~~~l~~fi~~~l 309 (445)
+++++. .+|+++ .+.|.. +.+++.+.+.+..
T Consensus 118 ~~~lid----~~G~i~~~~~G~~~~~~~~~~~~~~~~~ 151 (158)
T 3hdc_A 118 DTFIVD----RKGIIRQRVTGGIEWDAPKVVSYLKSLE 151 (158)
T ss_dssp EEEEEC----TTSBEEEEEESCCCTTSHHHHHHHHTTC
T ss_pred eEEEEc----CCCCEEEEEeCCCccchHHHHHHHHhhc
Confidence 988882 456544 466754 4567777776543
No 186
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.91 E-value=4.9e-10 Score=96.91 Aligned_cols=93 Identities=10% Similarity=-0.061 Sum_probs=63.0
Q ss_pred HhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc-chhhHhHhCCccCCCcEEEEeccCCCCCCC
Q 013319 212 EIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET-EASLCKELGVHRPRSPRIFAYSYKAGDKGS 288 (445)
Q Consensus 212 ~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~-~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~ 288 (445)
.+...++++||.|||+||++|+. .|.+.+..+...- ...|..||++. ...++.+++|.++ ||+++|. .+|+
T Consensus 39 ~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~--PT~~f~~----~~G~ 112 (151)
T 3ph9_A 39 YAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYV--PRIMFVD----PSLT 112 (151)
T ss_dssp HHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCS--SEEEEEC----TTSC
T ss_pred HHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCC--CEEEEEC----CCCC
Confidence 34566789999999999999999 9999864322110 23566777753 4567889999999 9999994 2343
Q ss_pred eee-ecCc----------ccHHHHHHHHHhhCC
Q 013319 289 LVE-YNEH----------LVAKNLKSFCRDHLP 310 (445)
Q Consensus 289 ~~~-y~g~----------~~~~~l~~fi~~~lp 310 (445)
.+. ..|. .+.++|.+.+++.+.
T Consensus 113 ~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 113 VRADIAGRYSNRLYTYEPRDLPLLIENMKKALR 145 (151)
T ss_dssp BCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHS
T ss_pred EEEEEeCCcCCcccccchhhHHHHHHHHHHHHH
Confidence 332 3444 345667777665543
No 187
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.89 E-value=3.4e-09 Score=91.64 Aligned_cols=89 Identities=10% Similarity=0.063 Sum_probs=73.3
Q ss_pred CCcEEEEEEECCCCccCCC--hhHHHHHHHHhcC-ccEEEEEeCc----------------------------cchh---
Q 013319 216 KGMTWLLFFYSPSSNRDGY--ESVIEEVANSMEG-ALKVGSINCE----------------------------TEAS--- 261 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~--~p~~~~~a~~l~~-~v~~~~Vdc~----------------------------~~~~--- 261 (445)
.++++||.||++||++|+. .|.++++++++++ .+.+..|+++ ....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 3578999999999999985 8999999999986 5999999872 2233
Q ss_pred ---hHhHhCCccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCC
Q 013319 262 ---LCKELGVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 262 ---lc~~~~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp 310 (445)
+++.|+|.++ |+++++. .+|+++ .+.|..+.+.|.+.|.+.+.
T Consensus 109 ~~~~~~~~~v~~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 109 IPSTMKKYRLEGT--PSIILAD----RKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp SCHHHHHTTCCSS--SEEEEEC----TTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred hhhHHHhcccCcc--ceEEEEC----CCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 8999999999 9999982 356544 47788888999999988765
No 188
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.88 E-value=1.3e-09 Score=92.75 Aligned_cols=72 Identities=14% Similarity=0.216 Sum_probs=60.1
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhc--CccEEEEEeCccc------------------------hhhHhHhCC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSME--GALKVGSINCETE------------------------ASLCKELGV 268 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~--~~v~~~~Vdc~~~------------------------~~lc~~~~I 268 (445)
.++++||.||++||++|+. .|.+++++++++ ..+.+..|+++.+ ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 4568999999999999999 999999999998 4799999999863 478999999
Q ss_pred ccCCCcEEEEeccCCCCCCCeeee
Q 013319 269 HRPRSPRIFAYSYKAGDKGSLVEY 292 (445)
Q Consensus 269 ~~~~~Pti~~f~~~~~~~g~~~~y 292 (445)
.++ |+++++.. .+|+++..
T Consensus 107 ~~~--P~~~lid~---~~G~i~~~ 125 (144)
T 1i5g_A 107 KSI--PTLVGVEA---DSGNIITT 125 (144)
T ss_dssp CSS--SEEEEEET---TTCCEEES
T ss_pred CCC--CEEEEEEC---CCCcEEec
Confidence 999 99999930 24555443
No 189
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.86 E-value=4.3e-09 Score=90.92 Aligned_cols=88 Identities=9% Similarity=0.034 Sum_probs=72.7
Q ss_pred CcEEEEEEECCCCccCCC--hhHHHHHHHHhcC-ccEEEEEeCc----------------------------cch-----
Q 013319 217 GMTWLLFFYSPSSNRDGY--ESVIEEVANSMEG-ALKVGSINCE----------------------------TEA----- 260 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~--~p~~~~~a~~l~~-~v~~~~Vdc~----------------------------~~~----- 260 (445)
++++||.||++||++|+. .|.+.++++++++ .+.|..|+++ .+.
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 578999999999999986 7999999999985 7999999974 122
Q ss_pred hhHhHhCCccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCC
Q 013319 261 SLCKELGVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 261 ~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp 310 (445)
.+++.|+|.++ |+++++. .+|+++ .+.|..+.++|.+.|.+.+.
T Consensus 108 ~~~~~~~v~~~--P~~~lid----~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 108 RTMAAYQMRGT--PSLLLID----KAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp HHHHHTTCCSS--SEEEEEC----TTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCC--CEEEEEC----CCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 58999999999 9999982 456543 47788888999999987765
No 190
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.86 E-value=5.7e-09 Score=90.04 Aligned_cols=81 Identities=12% Similarity=0.127 Sum_probs=66.4
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccchh-----------------------hHhHhCCccC
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETEAS-----------------------LCKELGVHRP 271 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~~~-----------------------lc~~~~I~~~ 271 (445)
++++||.||++||++|+. .|.+.++++++++ .+.+..|+++.... +++.|+|..+
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~ 114 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNL 114 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSC
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcccC
Confidence 468999999999999999 9999999999987 49999999997754 8889999999
Q ss_pred CCcEEEEeccCCCCCCCee-eecCcccHHHHHH
Q 013319 272 RSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKS 303 (445)
Q Consensus 272 ~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~ 303 (445)
|+++++. .+|+++ .+.|..+.++...
T Consensus 115 --P~~~lid----~~G~i~~~~~g~~~~e~~~~ 141 (152)
T 2lrt_A 115 --PSVFLVN----RNNELSARGENIKDLDEAIK 141 (152)
T ss_dssp --SEEEEEE----TTTEEEEETTTCSCHHHHHH
T ss_pred --ceEEEEC----CCCeEEEecCCHHHHHHHHH
Confidence 9999983 356544 3667766655443
No 191
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.85 E-value=2.9e-09 Score=90.51 Aligned_cols=73 Identities=21% Similarity=0.300 Sum_probs=60.5
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhc--CccEEEEEeCccc------------------------hhhHhHhCC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSME--GALKVGSINCETE------------------------ASLCKELGV 268 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~--~~v~~~~Vdc~~~------------------------~~lc~~~~I 268 (445)
.++++||.||++||++|+. .|.+++++++++ ..+.+..|+++.+ ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 3568999999999999999 999999999997 4789999998863 468999999
Q ss_pred ccCCCcEEEEeccCCCCCCCeeeec
Q 013319 269 HRPRSPRIFAYSYKAGDKGSLVEYN 293 (445)
Q Consensus 269 ~~~~~Pti~~f~~~~~~~g~~~~y~ 293 (445)
.++ |+++++.. .+|+++...
T Consensus 107 ~~~--Pt~~lid~---~~G~i~~~~ 126 (144)
T 1o73_A 107 ESI--PTLITINA---DTGAIIGTQ 126 (144)
T ss_dssp CSS--SEEEEEET---TTCCEEESC
T ss_pred CCC--CEEEEEEC---CCCeEEecc
Confidence 999 99999931 246555544
No 192
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.85 E-value=4.2e-09 Score=89.49 Aligned_cols=82 Identities=13% Similarity=0.173 Sum_probs=66.1
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHH---HHHHhcC-ccEEEEEeCccchh------------------------hHhHhC
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEE---VANSMEG-ALKVGSINCETEAS------------------------LCKELG 267 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~---~a~~l~~-~v~~~~Vdc~~~~~------------------------lc~~~~ 267 (445)
++++||.||++||++|+. .|.+.+ +.++++. .+.+..|+++.+.. +++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 478999999999999999 999999 9999965 79999999987633 477899
Q ss_pred CccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHH
Q 013319 268 VHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCR 306 (445)
Q Consensus 268 I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~ 306 (445)
|.++ |+++++. .+|+++. .+. ..++|.+|+.
T Consensus 111 v~~~--P~~~lid----~~G~i~~-~~~-~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRAI--PTLYLLD----KNKTVLL-KDA-TLQKVEQYLA 141 (142)
T ss_dssp CTTC--SEEEEEC----TTCBEEE-EEE-CHHHHHHHHH
T ss_pred CCcC--CeEEEEC----CCCcEEe-cCC-CHHHHHHHHh
Confidence 9999 9999983 4555443 332 5688888875
No 193
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.84 E-value=3.8e-09 Score=92.62 Aligned_cols=71 Identities=15% Similarity=0.209 Sum_probs=60.9
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC--ccEEEEEeCccc------------------------hhhHhHhCC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG--ALKVGSINCETE------------------------ASLCKELGV 268 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~--~v~~~~Vdc~~~------------------------~~lc~~~~I 268 (445)
.++++||.||++||++|+. .|.+++++++++. .+.|..|+++.. ..+++.|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 3578999999999999999 9999999999985 789999998876 678999999
Q ss_pred ccCCCcEEEEeccCCCCC-CCeeee
Q 013319 269 HRPRSPRIFAYSYKAGDK-GSLVEY 292 (445)
Q Consensus 269 ~~~~~Pti~~f~~~~~~~-g~~~~y 292 (445)
.++ |+++++. .+ |+++..
T Consensus 127 ~~~--Pt~~lid----~~~G~iv~~ 145 (165)
T 3s9f_A 127 ESI--PTLIGLN----ADTGDTVTT 145 (165)
T ss_dssp CSS--SEEEEEE----TTTCCEEES
T ss_pred CCC--CEEEEEe----CCCCEEEec
Confidence 999 9999993 33 555543
No 194
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.84 E-value=3.6e-09 Score=90.31 Aligned_cols=62 Identities=15% Similarity=0.197 Sum_probs=55.9
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhc--CccEEEEEeCccc------------------------hhhHhHhCC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSME--GALKVGSINCETE------------------------ASLCKELGV 268 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~--~~v~~~~Vdc~~~------------------------~~lc~~~~I 268 (445)
.++++||.||++||++|+. .|.++++++++. ..+.+..|+++.+ ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 4568999999999999999 999999999998 4799999999863 478999999
Q ss_pred ccCCCcEEEEe
Q 013319 269 HRPRSPRIFAY 279 (445)
Q Consensus 269 ~~~~~Pti~~f 279 (445)
.++ |+++++
T Consensus 107 ~~~--Pt~~li 115 (146)
T 1o8x_A 107 ESI--PTLIGV 115 (146)
T ss_dssp CSS--SEEEEE
T ss_pred CCC--CEEEEE
Confidence 999 999999
No 195
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=1.5e-08 Score=86.88 Aligned_cols=86 Identities=15% Similarity=0.254 Sum_probs=69.1
Q ss_pred CCcEEEEEEECCCCcc--CCC-hhHHHHHHHHh-cC-ccEEEEEeCccch-------------------------hhHhH
Q 013319 216 KGMTWLLFFYSPSSNR--DGY-ESVIEEVANSM-EG-ALKVGSINCETEA-------------------------SLCKE 265 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~--C~~-~p~~~~~a~~l-~~-~v~~~~Vdc~~~~-------------------------~lc~~ 265 (445)
.++++||.||++||++ |+. .|.+.++.+++ ++ .+.+..|+++..+ .+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3578999999999999 999 99999999999 65 5999999998764 78899
Q ss_pred hCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhC
Q 013319 266 LGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 266 ~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~l 309 (445)
|+|.++ |+++++. ++|+++... . +.++|.+.+.+.+
T Consensus 112 ~~v~~~--P~~~lid----~~G~i~~~~-~-~~~~l~~~l~~ll 147 (150)
T 3fw2_A 112 YSIYKI--PANILLS----SDGKILAKN-L-RGEELKKKIENIV 147 (150)
T ss_dssp TTCCSS--SEEEEEC----TTSBEEEES-C-CHHHHHHHHHHHH
T ss_pred cCCCcc--CeEEEEC----CCCEEEEcc-C-CHHHHHHHHHHHH
Confidence 999999 9999992 456544432 2 5677777776543
No 196
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.82 E-value=8.8e-09 Score=91.20 Aligned_cols=86 Identities=15% Similarity=0.187 Sum_probs=68.8
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC-----------------------ccchhhHhHhCCccC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC-----------------------ETEASLCKELGVHRP 271 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc-----------------------~~~~~lc~~~~I~~~ 271 (445)
.++++||.||++||++|+. .|.+++++++ .+.+..|++ +.+..+++.|+|..+
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 133 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGA 133 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCC
Confidence 3568999999999999999 9999999887 588888885 334578899999999
Q ss_pred CCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCC
Q 013319 272 RSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 272 ~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp 310 (445)
|+++++. .+|+++ .+.|..+.+.|.++|.+.+.
T Consensus 134 --P~~~lid----~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 134 --PETYLID----KQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp --CEEEEEC----TTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred --CeEEEEC----CCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 9888872 456544 47788888888888876543
No 197
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.81 E-value=6.1e-09 Score=93.49 Aligned_cols=86 Identities=10% Similarity=0.128 Sum_probs=70.8
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCc-----------------------------cchhhHhHhC
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCE-----------------------------TEASLCKELG 267 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~-----------------------------~~~~lc~~~~ 267 (445)
++||.||++||++|+. .|.++++.+++.. .+.+..|+++ .+..+++.|+
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 127 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYD 127 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhC
Confidence 6999999999999999 9999999999986 5999999994 3457899999
Q ss_pred CccCCCcEEEEeccCCCCCCCeee----------ecCcccHHHHHHHHHhhCC
Q 013319 268 VHRPRSPRIFAYSYKAGDKGSLVE----------YNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 268 I~~~~~Pti~~f~~~~~~~g~~~~----------y~g~~~~~~l~~fi~~~lp 310 (445)
|..+ |+++++. ++|+++. +.|..+.++|.+.|.+.+.
T Consensus 128 v~~~--P~~~lid----~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 128 AACT--PDFYIFD----RDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp CCEE--SEEEEEE----TTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred CCCC--CeEEEEc----CCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 9999 9999983 3455443 2466678889988887654
No 198
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.81 E-value=9.2e-09 Score=91.77 Aligned_cols=89 Identities=13% Similarity=0.169 Sum_probs=71.1
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc-----------------------------cchhhHhH
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE-----------------------------TEASLCKE 265 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~-----------------------------~~~~lc~~ 265 (445)
.++++||.||++||++|+. .|.++++++++.+.+.+..|+++ .+..+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 3578999999999999999 99999999999876999999983 34578999
Q ss_pred hCCccCCCcEEEEeccCCCCCCCeeee---------cCcccHHHHHHHHHhhCC
Q 013319 266 LGVHRPRSPRIFAYSYKAGDKGSLVEY---------NEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 266 ~~I~~~~~Pti~~f~~~~~~~g~~~~y---------~g~~~~~~l~~fi~~~lp 310 (445)
|+|..+ |+++++. .+|+++.. .|..+.++|.+.|.+.+.
T Consensus 112 ~~v~~~--P~~~lid----~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 112 YRALRT--PEVFLFD----ERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp TTCCEE--SEEEEEC----TTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred cCCCCC--CeEEEEC----CCCcEEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 999999 9999982 45554433 122356888888887665
No 199
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.78 E-value=1.4e-08 Score=99.98 Aligned_cols=88 Identities=11% Similarity=0.033 Sum_probs=73.2
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc---------------------------chhhHhHh
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET---------------------------EASLCKEL 266 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~---------------------------~~~lc~~~ 266 (445)
.++++||.||++||++|+. .|.+++++++++. .+.|..|+|+. +..+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 3578999999999999999 9999999999986 69999999853 35789999
Q ss_pred CCccCCCcEEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 267 GVHRPRSPRIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 267 ~I~~~~~Pti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
+|..+ |+++++. .+|+++ .+.|..+.++|.++|.+.+
T Consensus 161 gV~~~--Pt~~lID----~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 161 RNRYW--PAEYLID----ATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp TCCEE--SEEEEEC----TTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred CCCcc--CEEEEEe----CCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 99999 9999982 456544 4778888888888887654
No 200
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.75 E-value=2.1e-08 Score=89.22 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=71.6
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhc-CccEEEEEeCccc-----hhhHhHhCCc-------------------
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSME-GALKVGSINCETE-----ASLCKELGVH------------------- 269 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~-~~v~~~~Vdc~~~-----~~lc~~~~I~------------------- 269 (445)
.++++||.||++||++|+. .|.++++.++++ ..+.+..|+++.+ ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 4568999999999999999 999999999997 4799999999865 5677777774
Q ss_pred ----cCCCcEEEEeccCCCCCCCee-eecCccc--HHHHHHHHHhhCC
Q 013319 270 ----RPRSPRIFAYSYKAGDKGSLV-EYNEHLV--AKNLKSFCRDHLP 310 (445)
Q Consensus 270 ----~~~~Pti~~f~~~~~~~g~~~-~y~g~~~--~~~l~~fi~~~lp 310 (445)
++ |+++++. .+|+++ .+.|..+ .++|.++|.+.+.
T Consensus 139 ~~~~~~--P~~~lid----~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 139 GRALGM--PTSVLVD----PQGCEIATIAGPAEWASEDALKLIRAATG 180 (186)
T ss_dssp TCCSSS--SEEEEEC----TTSBEEEEEESCCCTTSHHHHHHHHHHHC
T ss_pred cccCCC--CEEEEEC----CCCCEEEEEecCCccCHHHHHHHHHHHhc
Confidence 67 9999982 456554 4677654 6889999887665
No 201
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.73 E-value=3.3e-08 Score=102.74 Aligned_cols=96 Identities=14% Similarity=0.045 Sum_probs=78.2
Q ss_pred cccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEec
Q 013319 202 RALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAYS 280 (445)
Q Consensus 202 ~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f~ 280 (445)
..++++.++........+.++.|+++||++|+. .|.+++++.++. .+.+.+||.+++++++++|+|+++ ||+++
T Consensus 102 ~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~~~~~~~i~sv--Pt~~i-- 176 (521)
T 1hyu_A 102 SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQNEITERNVMGV--PAVFV-- 176 (521)
T ss_dssp CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCSS--SEEEE--
T ss_pred CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHHHHHHhCCCcc--CEEEE--
Confidence 566777775542223456789999999999999 999999999875 799999999999999999999999 99977
Q ss_pred cCCCCCCCeeeecCcccHHHHHHHHHhh
Q 013319 281 YKAGDKGSLVEYNEHLVAKNLKSFCRDH 308 (445)
Q Consensus 281 ~~~~~~g~~~~y~g~~~~~~l~~fi~~~ 308 (445)
+|+.+ ..|..+.++|.+|+...
T Consensus 177 -----~g~~~-~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 177 -----NGKEF-GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp -----TTEEE-EESCCCHHHHHHHHCCS
T ss_pred -----CCEEE-ecCCCCHHHHHHHHhhc
Confidence 34444 44888889999998653
No 202
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.20 E-value=1.3e-09 Score=92.48 Aligned_cols=73 Identities=8% Similarity=0.210 Sum_probs=59.4
Q ss_pred Cc-EEEEEEECCCCccCCC-hhHHHHHHHHhc---CccEEEEEeCccc-------------------------hhhHhHh
Q 013319 217 GM-TWLLFFYSPSSNRDGY-ESVIEEVANSME---GALKVGSINCETE-------------------------ASLCKEL 266 (445)
Q Consensus 217 ~~-~~lV~Fyap~C~~C~~-~p~~~~~a~~l~---~~v~~~~Vdc~~~-------------------------~~lc~~~ 266 (445)
++ ++||.||++||++|+. .|.+++++++++ ..+.+..|+++.. ..+++.|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 8999999999999999 999999999983 3688888888765 3689999
Q ss_pred CCccCCCcEEEEeccCCCCCCCeeeecCc
Q 013319 267 GVHRPRSPRIFAYSYKAGDKGSLVEYNEH 295 (445)
Q Consensus 267 ~I~~~~~Pti~~f~~~~~~~g~~~~y~g~ 295 (445)
+|.++ |+++++. .+|+++...|.
T Consensus 105 ~v~~~--P~~~lid----~~G~i~~~~~~ 127 (143)
T 2lus_A 105 GITGI--PALVIVK----KDGTLISMNGR 127 (143)
Confidence 99999 9999983 35555554443
No 203
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.72 E-value=2.5e-08 Score=91.58 Aligned_cols=85 Identities=24% Similarity=0.353 Sum_probs=69.6
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCc-----------------------------cchhhHhHhC
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCE-----------------------------TEASLCKELG 267 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~-----------------------------~~~~lc~~~~ 267 (445)
++||.||++||++|+. .|.++++++++++ .+.|..|+++ .+..+++.|+
T Consensus 61 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~ 140 (218)
T 3u5r_E 61 ALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYG 140 (218)
T ss_dssp EEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHT
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcC
Confidence 6999999999999999 9999999999987 4999999994 3568899999
Q ss_pred CccCCCcEEEEeccCCCCCCCeeeecC-----------cccHHHHHHHHHhhCC
Q 013319 268 VHRPRSPRIFAYSYKAGDKGSLVEYNE-----------HLVAKNLKSFCRDHLP 310 (445)
Q Consensus 268 I~~~~~Pti~~f~~~~~~~g~~~~y~g-----------~~~~~~l~~fi~~~lp 310 (445)
|..+ |+++++. .+|+++ |.| ..+.++|.+.|.+.+.
T Consensus 141 v~~~--P~~~liD----~~G~i~-~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 141 AACT--PDFFLYD----RERRLV-YHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp CCEE--SEEEEEC----TTCBEE-EEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred CCCC--CeEEEEC----CCCcEE-EeccccccccccccccCHHHHHHHHHHHHc
Confidence 9999 9999992 455543 543 2346788888887665
No 204
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.69 E-value=1.2e-08 Score=102.38 Aligned_cols=66 Identities=50% Similarity=0.807 Sum_probs=56.6
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCh----HHHHHHHHHHHHHHHcCCHHHHHHhhh
Q 013319 28 KTVDLYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNK----AAQEKFAEINNAYDILSDEEKRKNYDL 93 (445)
Q Consensus 28 ~~~d~y~vLgv~~~a~~~~ik~ayr~l~~~~hPd~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 93 (445)
...++|.+||+.+.++.++|+++|+++++++|||+.+.+ .+.++|++|.+||++|+||++|..||.
T Consensus 380 ~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 380 QKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp HSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred cchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 356999999999999999999999999999999998864 378899999999999999999999996
No 205
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.69 E-value=9.6e-08 Score=88.17 Aligned_cols=107 Identities=10% Similarity=0.121 Sum_probs=84.6
Q ss_pred CcccccChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCcc--chhhHhHhCCc--cCCC
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCET--EASLCKELGVH--RPRS 273 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~--~~~lc~~~~I~--~~~~ 273 (445)
+.|.++|.+|+.......-...++.|+.+||.+|.. .+.|+++|+++++.+.|+.||++. +..+++.+|+. .+
T Consensus 113 plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~-- 190 (227)
T 4f9z_D 113 HMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQL-- 190 (227)
T ss_dssp CSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGC--
T ss_pred CceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccC--
Confidence 448899999997654333345566788999999999 999999999999999999999974 66789999998 67
Q ss_pred cEEEEeccCCCCCCCeeee-cCcccHHHHHHHHHhhCC
Q 013319 274 PRIFAYSYKAGDKGSLVEY-NEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 274 Pti~~f~~~~~~~g~~~~y-~g~~~~~~l~~fi~~~lp 310 (445)
|+|+++... ++....+ .+..+.+.|.+|+.+.+.
T Consensus 191 P~~~i~~~~---~~~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 191 PALAIYQTL---DDEWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp SEEEEEESS---SCCEEEETTCCCCHHHHHHHHHHHHT
T ss_pred CEEEEEECC---CCccccCCcCCCCHHHHHHHHHHHhC
Confidence 999999532 2233444 367899999999987653
No 206
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.65 E-value=4.1e-08 Score=83.33 Aligned_cols=83 Identities=16% Similarity=0.268 Sum_probs=64.9
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccch--------------------------hhHhHhC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETEA--------------------------SLCKELG 267 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~~--------------------------~lc~~~~ 267 (445)
.++++||.||++||++|+. .|.+.++.++++. .+.|..|+++.+. .+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 3568999999999999999 9999999999975 6999999988542 4678899
Q ss_pred CccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHH
Q 013319 268 VHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCR 306 (445)
Q Consensus 268 I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~ 306 (445)
|..+ |+.+++. ++|+++.. . ...++|.+.+.
T Consensus 111 v~~~--P~~~lid----~~G~i~~~-~-~~~~~l~~~l~ 141 (143)
T 4fo5_A 111 LRKG--FKNFLIN----DEGVIIAA-N-VTPEKLTEILK 141 (143)
T ss_dssp GGGC--CCEEEEC----TTSBEEEE-S-CCHHHHHHHHT
T ss_pred CCCC--CcEEEEC----CCCEEEEc-c-CCHHHHHHHHH
Confidence 9999 9999882 45654432 2 24566776664
No 207
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.65 E-value=1.6e-08 Score=81.00 Aligned_cols=78 Identities=9% Similarity=0.143 Sum_probs=61.9
Q ss_pred cEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc--cchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecC
Q 013319 218 MTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE--TEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNE 294 (445)
Q Consensus 218 ~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~--~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g 294 (445)
.+.++.|+++||++|+. .+.+++++. .+.+..||++ ++++++++++ ..+ |+|++ +|+.+ ..+
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~~~el~~~~g-~~v--P~l~~-------~g~~~-~~~ 80 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPENSTWYERYK-FDI--PVFHL-------NGQFL-MMH 80 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSSTTHHHHHHSS-SSC--SEEEE-------SSSEE-EES
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcchHHHHHHHC-CCC--CEEEE-------CCEEE-Eec
Confidence 35789999999999999 888876643 3899999999 7889999999 999 98743 34444 344
Q ss_pred cccHHHHHHHHHhhCC
Q 013319 295 HLVAKNLKSFCRDHLP 310 (445)
Q Consensus 295 ~~~~~~l~~fi~~~lp 310 (445)
..+.+.|.+++.+.+.
T Consensus 81 g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 81 RVNTSKLEKQLRKLSG 96 (100)
T ss_dssp SCCHHHHHHHHHSSSC
T ss_pred CCCHHHHHHHHHHHHh
Confidence 5688899999987654
No 208
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.61 E-value=2.6e-07 Score=79.77 Aligned_cols=91 Identities=13% Similarity=0.089 Sum_probs=67.6
Q ss_pred hhcCCcEEEEEEECCCCccCCC--hhHH--HHHHHHhcCccEEEEEeCccc--hhhHhHhCCccCCCcEEEEeccCCCCC
Q 013319 213 IVEKGMTWLLFFYSPSSNRDGY--ESVI--EEVANSMEGALKVGSINCETE--ASLCKELGVHRPRSPRIFAYSYKAGDK 286 (445)
Q Consensus 213 v~~~~~~~lV~Fyap~C~~C~~--~p~~--~~~a~~l~~~v~~~~Vdc~~~--~~lc~~~~I~~~~~Pti~~f~~~~~~~ 286 (445)
....++++||.||++||..|+. ..+| .++++.++..+.+.+||.+.. ..++++|+|.++ |+++++... .
T Consensus 38 Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~--P~~~fld~~---~ 112 (153)
T 2dlx_A 38 GQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDF--PYVSILDPR---T 112 (153)
T ss_dssp HHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSS--SEEEEECTT---T
T ss_pred HHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCC--CEEEEEeCC---C
Confidence 3455789999999999999999 3444 566676655677888888653 568899999999 999999321 1
Q ss_pred CC-eeeecCcccHHHHHHHHHhhC
Q 013319 287 GS-LVEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 287 g~-~~~y~g~~~~~~l~~fi~~~l 309 (445)
|+ ...+.| .+.+++.+++.+.+
T Consensus 113 G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 113 GQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp CCCCEEESS-CCHHHHHHHHHHHH
T ss_pred CcEeeecCC-CCHHHHHHHHHHHH
Confidence 32 333555 78888888887654
No 209
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.05 E-value=4.3e-09 Score=91.13 Aligned_cols=85 Identities=12% Similarity=0.096 Sum_probs=60.8
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHH-HHHHhc--CccEEEEEeCccchhhHhHhC------------------------
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEE-VANSME--GALKVGSINCETEASLCKELG------------------------ 267 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~-~a~~l~--~~v~~~~Vdc~~~~~lc~~~~------------------------ 267 (445)
.++++||.||++||++|+. .|.+++ +..++. ..+.+..|+++...+.++++.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 3568999999999999999 999998 888886 378999999887654444433
Q ss_pred CccCCCcEEEEeccCCCCCCCeee-ecCcccHHHHHHHHHh
Q 013319 268 VHRPRSPRIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRD 307 (445)
Q Consensus 268 I~~~~~Pti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~ 307 (445)
+.++ |+++++. .+|+++. +.| .+.+++.+++.+
T Consensus 112 ~~~~--P~~~lid----~~G~i~~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGI--TRNVLID----REGKIVKLTRL-YNEEEFASLVQQ 145 (159)
Confidence 4567 9988882 3454443 344 355556665543
No 210
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.61 E-value=1.1e-07 Score=83.16 Aligned_cols=88 Identities=17% Similarity=0.217 Sum_probs=70.6
Q ss_pred CcEEEEEEECCCCcc-CCC-hhHHHHHHHHhc-----CccEEEEEeCccc----------------------------hh
Q 013319 217 GMTWLLFFYSPSSNR-DGY-ESVIEEVANSME-----GALKVGSINCETE----------------------------AS 261 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~-C~~-~p~~~~~a~~l~-----~~v~~~~Vdc~~~----------------------------~~ 261 (445)
++++||.||++||++ |+. .|.++++.++++ ..+.+..|+++.+ ..
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 568999999999998 999 999999999995 4799999998732 25
Q ss_pred hHhHhCCccCCCc---------------EEEEeccCCCCCCCeee-ecCcccHHHHHHHHHhhCC
Q 013319 262 LCKELGVHRPRSP---------------RIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 262 lc~~~~I~~~~~P---------------ti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~lp 310 (445)
+++.|+|... | +++++ .++|+++. +.|..+.++|.+.|.+.+.
T Consensus 106 ~~~~~~v~~~--p~~~~~~~~~~~~~~~~~~li----d~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 106 ASHSYRVYYN--AGPKDEDQDYIVDHSIAIYLL----NPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHSCCCCE--ECCCCSSCCCCEECCCEEEEE----CTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHhCeEEE--ecCCCCCCCeEEeccceEEEE----CCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 7889999887 7 77776 24565544 7788888889988887653
No 211
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.61 E-value=3.8e-08 Score=71.56 Aligned_cols=53 Identities=19% Similarity=0.156 Sum_probs=45.8
Q ss_pred cCcccccCCCCC---CCHHHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHHcCCH
Q 013319 30 VDLYKVLGVERN---ASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDE 85 (445)
Q Consensus 30 ~d~y~vLgv~~~---a~~~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~L~d~ 85 (445)
...|.||||+++ ++.++|+++||+|....|||++.++ ....+|++|++.|...
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~---yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF---YLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHHHHH
Confidence 356899999999 9999999999999999999998764 4566799999998643
No 212
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.59 E-value=7.3e-08 Score=84.04 Aligned_cols=89 Identities=13% Similarity=0.246 Sum_probs=67.5
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc-------c----hhhHh-Hh---------------
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET-------E----ASLCK-EL--------------- 266 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~-------~----~~lc~-~~--------------- 266 (445)
.++++||.||++||++|+. .|.+.++++++++ .+.+..|+++. . ...++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 4578999999999999999 9999999999987 49999999862 1 23344 33
Q ss_pred --------------CC--ccCCCc---EEEEeccCCCCCCCeee-ecCcccHHHHHHHHHhhCC
Q 013319 267 --------------GV--HRPRSP---RIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 267 --------------~I--~~~~~P---ti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~lp 310 (445)
+| ..+ | +++++ .++|+++. +.|..+.++|.+.|.+.+.
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~--p~~~~~~li----d~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDI--QWNFAKFLV----NKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCC--CSTTCEEEE----CTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred chHHHHHHHHhcCCCccCCcc--cccccEEEE----CCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 33 455 8 77776 24565544 7788788889999887764
No 213
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.58 E-value=9e-08 Score=82.91 Aligned_cols=88 Identities=14% Similarity=0.242 Sum_probs=70.7
Q ss_pred CcEEEEEEECCCCcc-CCC-hhHHHHHHHHhcC-----ccEEEEEeCccc----------------------------hh
Q 013319 217 GMTWLLFFYSPSSNR-DGY-ESVIEEVANSMEG-----ALKVGSINCETE----------------------------AS 261 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~-C~~-~p~~~~~a~~l~~-----~v~~~~Vdc~~~----------------------------~~ 261 (445)
++++||.||++||++ |+. .|.++++.++++. .+.+..|+++.+ ..
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 568999999999998 999 9999999999863 789999998752 14
Q ss_pred hHhHhCCccCCCc---------------EEEEeccCCCCCCCeee-ecCcccHHHHHHHHHhhCC
Q 013319 262 LCKELGVHRPRSP---------------RIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 262 lc~~~~I~~~~~P---------------ti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~lp 310 (445)
+++.|+|... | +++++ .++|+++. +.|..+.++|.+.|.+.+.
T Consensus 103 ~~~~~~v~~~--p~~~~~~~~~~~~~~~~~~li----d~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 103 VARAYRVYYS--PGPKDEDEDYIVDHTIIMYLI----GPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHTTTCCEE--EEEECTTSCEEEEECCEEEEE----CTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHhcCeEEE--ecCCCCCCCeeEeccceEEEE----CCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 7888999988 8 67776 24565554 6777788899988887653
No 214
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.57 E-value=7.3e-09 Score=79.17 Aligned_cols=57 Identities=11% Similarity=0.181 Sum_probs=47.1
Q ss_pred EEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc-cchhhHhHhCCccCCCcEEEE
Q 013319 220 WLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE-TEASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 220 ~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~-~~~~lc~~~~I~~~~~Pti~~ 278 (445)
-++.||++||++|+. .|.++++++++...+.+..||.+ ++.++++++||+++ |||++
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~v--Pt~~i 61 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSV--PALVI 61 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEE--EEEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcC--CEEEE
Confidence 378899999999999 99999988776545666666654 56788999999999 99877
No 215
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.57 E-value=1.6e-08 Score=82.82 Aligned_cols=83 Identities=16% Similarity=0.226 Sum_probs=57.2
Q ss_pred HHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc-----hhhHhHhCCccCCCcEEEEeccCCC
Q 013319 211 KEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE-----ASLCKELGVHRPRSPRIFAYSYKAG 284 (445)
Q Consensus 211 ~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~-----~~lc~~~~I~~~~~Pti~~f~~~~~ 284 (445)
+.+.+.. +++| ||++||++|+. .|.+++++.. +.+..||.+.+ ..++++++|.++ ||+ +.
T Consensus 14 ~~~~~~~-~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~v~~~--Pt~-~~----- 79 (116)
T 2e7p_A 14 KELASSA-PVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTGRGTV--PNV-FI----- 79 (116)
T ss_dssp HHHHTSS-SEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHSCCSS--CEE-EE-----
T ss_pred HHHHcCC-CEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhCCCCc--CEE-EE-----
Confidence 3444444 4555 99999999999 9999887543 45556665554 469999999999 999 33
Q ss_pred CCCCee-eecCcc---cHHHHHHHHHhh
Q 013319 285 DKGSLV-EYNEHL---VAKNLKSFCRDH 308 (445)
Q Consensus 285 ~~g~~~-~y~g~~---~~~~l~~fi~~~ 308 (445)
+|+.+ .+.|.. +.+.|.+++.+.
T Consensus 80 -~g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 80 -GGKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp -TTEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred -CCEEECChHHHHHHHhCChHHHHHHHc
Confidence 34433 244443 556788888764
No 216
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.56 E-value=7.7e-08 Score=84.05 Aligned_cols=87 Identities=16% Similarity=0.197 Sum_probs=68.5
Q ss_pred CCcEEEEEEECCCCcc-CCC-hhHHHHHHHHhcC----ccEEEEEeCccc----------------------------hh
Q 013319 216 KGMTWLLFFYSPSSNR-DGY-ESVIEEVANSMEG----ALKVGSINCETE----------------------------AS 261 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~-C~~-~p~~~~~a~~l~~----~v~~~~Vdc~~~----------------------------~~ 261 (445)
.++++||.||++||++ |+. .|.+.++.++++. .+.+..|+++.+ ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4568999999999998 999 9999999999874 699999998753 35
Q ss_pred hHhHhCC---------------ccCCCcEEEEeccCCCCCCCee-eecCcc--cHHHHHHHHHhhC
Q 013319 262 LCKELGV---------------HRPRSPRIFAYSYKAGDKGSLV-EYNEHL--VAKNLKSFCRDHL 309 (445)
Q Consensus 262 lc~~~~I---------------~~~~~Pti~~f~~~~~~~g~~~-~y~g~~--~~~~l~~fi~~~l 309 (445)
+++.|++ ... |+++++. +|+++ .+.|.. +.++|.+.|.+.+
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~--P~~~lid-----~G~i~~~~~g~~~~~~~~l~~~l~~ll 172 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHT--ATTFVVK-----EGRLVLLYSPDKAEATDRVVADLQALL 172 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEEC--CCEEEEE-----TTEEEEEECHHHHTCHHHHHHHHHHCC
T ss_pred HHHhcCeEEEeccCCCCCCceEecC--CEEEEEE-----CCEEEEEECCCCCCCHHHHHHHHHHhC
Confidence 6666664 577 9999993 45444 467776 7889999887653
No 217
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.54 E-value=5.4e-07 Score=80.34 Aligned_cols=89 Identities=12% Similarity=0.127 Sum_probs=66.1
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc-------c-h---hhHh-H----------------
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET-------E-A---SLCK-E---------------- 265 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~-------~-~---~lc~-~---------------- 265 (445)
.++++||.||++||++|+. .|.+.++.+++++ .+.+..|+++. . . +.++ +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4568999999999999999 9999999999987 59999999862 1 1 1122 1
Q ss_pred ----------------hCCccCCCc---EEEEeccCCCCCCCee-eecCcccHHHHHHHHHhhCC
Q 013319 266 ----------------LGVHRPRSP---RIFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 266 ----------------~~I~~~~~P---ti~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~lp 310 (445)
+++..+ | +++++ .++|+++ .+.|..+.++|.+.|.+.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~i--P~~~~~~li----D~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAI--KWNFTSFLI----DRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSC--CSTTCEEEE----CTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred chhHHHHHHHhhcCCccCCCcc--ccceeEEEE----CCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 123344 6 77777 2466654 47788888999999988775
No 218
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.52 E-value=1.7e-07 Score=81.33 Aligned_cols=84 Identities=14% Similarity=0.262 Sum_probs=65.0
Q ss_pred CcE-EEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCc---------------------cchhhHhHhCCcc-
Q 013319 217 GMT-WLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCE---------------------TEASLCKELGVHR- 270 (445)
Q Consensus 217 ~~~-~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~---------------------~~~~lc~~~~I~~- 270 (445)
+++ +||.|| ++||++|+. .|.+.+++++++. .+.+..|+++ .+..+++.|+|.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 107 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGF 107 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCS
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCc
Confidence 344 899999 999999999 9999999999987 5999999987 4567899999998
Q ss_pred ---CCCcEEEEeccCCCCCCCee-eecCcc----cHHHHHHHHH
Q 013319 271 ---PRSPRIFAYSYKAGDKGSLV-EYNEHL----VAKNLKSFCR 306 (445)
Q Consensus 271 ---~~~Pti~~f~~~~~~~g~~~-~y~g~~----~~~~l~~fi~ 306 (445)
+ |+++++. .+|+++ .+.|.. ..+++.+.+.
T Consensus 108 ~~~~--P~~~lid----~~G~i~~~~~g~~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 108 ILPA--RITFVID----KKGIIRHIYNSQMNPANHVNEALKALK 145 (161)
T ss_dssp SSCC--CEEEEEC----TTSBEEEEEECSSCTTHHHHHHHHHHH
T ss_pred Cccc--ceEEEEC----CCCEEEEEEecCCCCCcCHHHHHHHHH
Confidence 8 9999882 456554 366632 2345555554
No 219
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.50 E-value=3e-07 Score=82.25 Aligned_cols=89 Identities=16% Similarity=0.229 Sum_probs=67.5
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc--------c---hhhH-hH----------------
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET--------E---ASLC-KE---------------- 265 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~--------~---~~lc-~~---------------- 265 (445)
.++++||.||++||+.|+. .|.+.++.+++.+ .+.|..|+++. . .+.+ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 3568999999999999999 9999999999987 59999999872 1 2233 22
Q ss_pred -------------hCCccCCCc------EEEEeccCCCCCCCeee-ecCcccHHHHHHHHHhhCC
Q 013319 266 -------------LGVHRPRSP------RIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 266 -------------~~I~~~~~P------ti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~lp 310 (445)
++|.++ | +.+++ .++|+++. +.|..+.++|.+.|.+.+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~--P~i~~~~~~~li----d~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKT--KAIKWNFTSFLI----DRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGC--CSCCSTTCEEEE----CTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCC--ccccccceEEEE----CCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 367777 8 66666 24565544 6788788889988887653
No 220
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.49 E-value=1.1e-07 Score=73.04 Aligned_cols=73 Identities=14% Similarity=0.287 Sum_probs=57.2
Q ss_pred EEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccch----hhHhHhC--CccCCCcEEEEeccCCCCCCCeeeec
Q 013319 221 LLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEA----SLCKELG--VHRPRSPRIFAYSYKAGDKGSLVEYN 293 (445)
Q Consensus 221 lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~----~lc~~~~--I~~~~~Pti~~f~~~~~~~g~~~~y~ 293 (445)
++.|+++||++|+. .+.+++++.++. .+.+..||+++++ +++++++ +..+ |+|++ +|+.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~-~i~~~~vdi~~~~~~~~~l~~~~~~~~~~v--P~i~~-------~g~~i~-- 70 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD-DFQYQYVDIRAEGITKEDLQQKAGKPVETV--PQIFV-------DQQHIG-- 70 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS-SCEEEEECHHHHTCCSHHHHHHTCCCSCCS--CEEEE-------TTEEEE--
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC-CceEEEEecccChHHHHHHHHHhCCCCcee--CeEEE-------CCEEEE--
Confidence 67899999999999 999999998865 4899999998764 7899999 9999 99843 343331
Q ss_pred CcccHHHHHHHHHhh
Q 013319 294 EHLVAKNLKSFCRDH 308 (445)
Q Consensus 294 g~~~~~~l~~fi~~~ 308 (445)
| .++|.+++.+.
T Consensus 71 ~---~~~l~~~~~~~ 82 (85)
T 1ego_A 71 G---YTDFAAWVKEN 82 (85)
T ss_dssp S---SHHHHHHHHHH
T ss_pred C---HHHHHHHHHHh
Confidence 2 25787777654
No 221
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.49 E-value=1.6e-07 Score=82.35 Aligned_cols=89 Identities=17% Similarity=0.250 Sum_probs=65.7
Q ss_pred CCcEEEEEEECCCCccCCChhHHHHHHHHhcC-ccEEEEEeCcc-----------chhhH--------------------
Q 013319 216 KGMTWLLFFYSPSSNRDGYESVIEEVANSMEG-ALKVGSINCET-----------EASLC-------------------- 263 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~~p~~~~~a~~l~~-~v~~~~Vdc~~-----------~~~lc-------------------- 263 (445)
.++++||.||++||++|+..|.+.++.++++. .+.+..|+++. ...++
T Consensus 31 ~Gk~vll~F~a~wC~~C~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~~ 110 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTPQYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGGN 110 (171)
T ss_dssp TTCEEEEEEEESSSCCHHHHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSSTT
T ss_pred CCCEEEEEEEecCCCcchhHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCcc
Confidence 35789999999999999988899999999987 59999998741 11222
Q ss_pred ----------hHhCCccCCCc------EEEEeccCCCCCCCeee-ecCcccHHHHHHHHHhhCC
Q 013319 264 ----------KELGVHRPRSP------RIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 264 ----------~~~~I~~~~~P------ti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~lp 310 (445)
+.++|.++ | +++++ .++|+++. +.|..+.+.|.+.|.+.+.
T Consensus 111 ~~~~~~~~~~~~~~v~~~--P~i~~~~~~~li----d~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 111 EDPVYKFLKSQKSGMLGL--RGIKWNFEKFLV----DKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp BCHHHHHHHHHSCCSSSC--CSCCSTTCEEEE----CSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred chHHHHHHHhccCCcCCC--CcccccceEEEE----CCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 13577788 9 77776 24565544 6787788889888887654
No 222
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.48 E-value=3.1e-07 Score=79.88 Aligned_cols=88 Identities=15% Similarity=0.271 Sum_probs=64.7
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc----c-------hhhH-hHh---------------
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET----E-------ASLC-KEL--------------- 266 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~----~-------~~lc-~~~--------------- 266 (445)
.++++||.||++||++|+. .|.++++.+++.+ .+.+..|+++. + ...+ +++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4578999999999999999 9999999999987 59999999863 1 2232 333
Q ss_pred --------------C-----CccCCCcEEEEeccCCCCCCCeee-ecCcccHHHHHHHHHhhC
Q 013319 267 --------------G-----VHRPRSPRIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 267 --------------~-----I~~~~~Pti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~l 309 (445)
+ |..+ |+++++ .++|+++. +.|..+.++|.+.|.+.+
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~--P~~~li----d~~G~i~~~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWN--FSKFLV----DRQGQPVKRYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCST--TCEEEE----CTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCccccc--ceEEEE----CCCCCEEEEcCCCCCHHHHHHHHHHHh
Confidence 2 3334 777777 24565544 778777788888887654
No 223
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.47 E-value=3.9e-07 Score=81.19 Aligned_cols=87 Identities=14% Similarity=0.119 Sum_probs=69.3
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc-------------------------chhhHhHhCC
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET-------------------------EASLCKELGV 268 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~-------------------------~~~lc~~~~I 268 (445)
++++||.|| ++||++|+. .|.+.+++++++. .+.+..|+++. +..+++.|+|
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 110 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDV 110 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTC
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCC
Confidence 468999999 999999999 9999999999975 68999999875 3467889999
Q ss_pred c------cCCCcEEEEeccCCCCCCCeee-ecCcc----cHHHHHHHHHhhC
Q 013319 269 H------RPRSPRIFAYSYKAGDKGSLVE-YNEHL----VAKNLKSFCRDHL 309 (445)
Q Consensus 269 ~------~~~~Pti~~f~~~~~~~g~~~~-y~g~~----~~~~l~~fi~~~l 309 (445)
. .+ |+++++. .+|+++. +.|.. +.++|.+.|.+..
T Consensus 111 ~~~~~g~~~--P~~~lid----~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 111 LNEETGLAD--RGTFIID----PDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp EETTTTEEC--EEEEEEC----TTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred CcCCCCcee--eEEEEEC----CCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 8 88 9999982 4565444 44543 5678888877543
No 224
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.47 E-value=3.4e-07 Score=82.35 Aligned_cols=87 Identities=10% Similarity=0.103 Sum_probs=69.0
Q ss_pred CCcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc----------------------------chhhHh
Q 013319 216 KGMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET----------------------------EASLCK 264 (445)
Q Consensus 216 ~~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~----------------------------~~~lc~ 264 (445)
.++++||.|| ++||++|+. .|.+.++.+++.. .+.+..|+++. +..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3568999999 999999999 9999999999975 59999999874 346888
Q ss_pred HhCCc-----cCCCcEEEEeccCCCCCCCeee-ecCcc----cHHHHHHHHHhh
Q 013319 265 ELGVH-----RPRSPRIFAYSYKAGDKGSLVE-YNEHL----VAKNLKSFCRDH 308 (445)
Q Consensus 265 ~~~I~-----~~~~Pti~~f~~~~~~~g~~~~-y~g~~----~~~~l~~fi~~~ 308 (445)
.|+|. .+ |+++++. .+|+++. +.|.. +.++|.+.|.+.
T Consensus 112 ~~~v~~~~g~~~--P~~~lid----~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYDVLFEEAIAL--RGAFLID----KNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTTCEETTTEEC--EEEEEEE----TTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhCCcccCCccc--ceEEEEC----CCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99998 88 9999983 3565443 44543 567888887754
No 225
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.46 E-value=4.4e-07 Score=81.49 Aligned_cols=88 Identities=9% Similarity=0.089 Sum_probs=70.9
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc-------------------------chhhHhHhCC
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET-------------------------EASLCKELGV 268 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~-------------------------~~~lc~~~~I 268 (445)
++++||.|| ++||++|+. .|.+.++.++++. .+.|..|+++. +..+++.|+|
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 468999999 999999999 9999999999986 69999999874 3467889999
Q ss_pred c-----cCCCcEEEEeccCCCCCCCeee-ecCcc----cHHHHHHHHHhhCC
Q 013319 269 H-----RPRSPRIFAYSYKAGDKGSLVE-YNEHL----VAKNLKSFCRDHLP 310 (445)
Q Consensus 269 ~-----~~~~Pti~~f~~~~~~~g~~~~-y~g~~----~~~~l~~fi~~~lp 310 (445)
. .+ |+++++. .+|+++. +.|.. +.++|.+.|.+.+.
T Consensus 125 ~~~~g~~~--P~~~lid----~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 125 LNADGVAD--RVTFIVD----PNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp BCTTSSBC--EEEEEEC----TTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred cccCCCcc--ceEEEEc----CCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 9 88 9999982 4565544 44543 67888888887654
No 226
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.46 E-value=2.4e-07 Score=82.14 Aligned_cols=88 Identities=8% Similarity=0.200 Sum_probs=64.9
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc-------c----hhhHhH-hC--------------
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET-------E----ASLCKE-LG-------------- 267 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~-------~----~~lc~~-~~-------------- 267 (445)
.++++||.||++||++|+. .|.+++++++++. .+.+..|+|+. . .+.+++ ++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 4568999999999999999 9999999999987 49999999863 1 233444 32
Q ss_pred ---------CccCCCc-------EEEEeccCCCCCCCeee-ecCcccHHHHHHHHHhhC
Q 013319 268 ---------VHRPRSP-------RIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 268 ---------I~~~~~P-------ti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~l 309 (445)
+..+ | +.+++ .++|+++. +.|..+.++|.+.|.+.+
T Consensus 128 ~~~~~~~~~~~~~--P~~~~~~~~~~li----d~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 128 GAHPAFKYLAQTS--GKEPTWNFWKYLV----APDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TSCHHHHHHHHHH--SCCCCSTTCEEEE----CTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred cchhhhhhhhhcC--CCccccceeEEEE----cCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 3445 7 55555 24565544 677778888888887654
No 227
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.44 E-value=5.7e-07 Score=75.74 Aligned_cols=97 Identities=11% Similarity=0.100 Sum_probs=73.0
Q ss_pred eccccccchhhhccCCCCEEEEEecCCC-------ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEE
Q 013319 315 RISLNRIEFTFDAKARLPSVLLLSTKKE-------TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGW 387 (445)
Q Consensus 315 ~i~~~~~~~~~~~~~~~~~vvlF~~~~~-------~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~ 387 (445)
.++.++++... .....+++|.|+.... ..+.+.+||.+|.++++|+.++++ .+++++.+|+|.+.||+++|
T Consensus 19 ~vt~~~F~~~v-~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvD-e~~~la~~ygV~siPTlilF 96 (137)
T 2qsi_A 19 LVDEATVDDFI-AHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAE-AERGLMARFGVAVCPSLAVV 96 (137)
T ss_dssp EECTTTHHHHH-HTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGG-GHHHHHHHHTCCSSSEEEEE
T ss_pred ccCHhHHHHHH-hcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECC-CCHHHHHHcCCccCCEEEEE
Confidence 34444444333 2333488999987544 389999999999999999888765 67999999999999999988
Q ss_pred ccCCcccccccccChhhHHHHHHHHH
Q 013319 388 LSNGEKDVLKTGISVKDQKSSIHELS 413 (445)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (445)
+.++......+-.+.+++.+++..+.
T Consensus 97 kdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 97 QPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp ECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 88777777767777777766665443
No 228
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.40 E-value=5.1e-07 Score=77.95 Aligned_cols=83 Identities=11% Similarity=0.050 Sum_probs=63.7
Q ss_pred EEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc-----------------------chhhHhHhCCc---
Q 013319 219 TWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET-----------------------EASLCKELGVH--- 269 (445)
Q Consensus 219 ~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~-----------------------~~~lc~~~~I~--- 269 (445)
++||.|| ++||++|+. .|.+.+++++++. .+.+..|+++. +..+++.|+|.
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~ 117 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQ 117 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETT
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcccc
Confidence 8999998 999999999 9999999999975 69999999874 56788999998
Q ss_pred -cCCCc--EEEEeccCCCCCCCeee-ecCcc----cHHHHHHHHHh
Q 013319 270 -RPRSP--RIFAYSYKAGDKGSLVE-YNEHL----VAKNLKSFCRD 307 (445)
Q Consensus 270 -~~~~P--ti~~f~~~~~~~g~~~~-y~g~~----~~~~l~~fi~~ 307 (445)
++ | +++++ ..+|+++. +.|.. ..+++.+.+.+
T Consensus 118 ~~~--p~~~~~li----d~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 118 AGI--ANRGTFVV----DRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TTE--ECSEEEEE----CTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred CCC--eeeeEEEE----CCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 88 8 77776 24565443 55543 33556555543
No 229
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.37 E-value=1.7e-06 Score=70.93 Aligned_cols=92 Identities=12% Similarity=0.082 Sum_probs=66.3
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccc---
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTG--- 399 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~--- 399 (445)
..+++++|.|+..... .+.+..++..+.+.+.|+.+.+. .+.+++++|+|..+||++++..++....+.+.
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~g~~~~ 97 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQ-AYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQIN 97 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETT-TCHHHHHHTTCCSSSEEEEEEEEGGGTEEEEEEEC
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCc-CCHHHHHHcCCCccceEEEEeCCCccceeeccccC
Confidence 4567889988876532 57788999999888888666544 57889999999999999999877665545443
Q ss_pred -cChhhHHHHHHHHHhhhhhhh
Q 013319 400 -ISVKDQKSSIHELSKLLDGLK 420 (445)
Q Consensus 400 -~~~~~~~~~~~~~~~~l~~~~ 420 (445)
.+.+++.+++..+.+.+...+
T Consensus 98 ~~~~~~l~~~l~~~l~~~~~~~ 119 (122)
T 3aps_A 98 SRDAKTIAALIYGKLETLQSQV 119 (122)
T ss_dssp CSCHHHHHHHHHHHHHCC----
T ss_pred cCCHHHHHHHHHHHHHhhhhhh
Confidence 577788777776665554443
No 230
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.35 E-value=6.5e-07 Score=79.39 Aligned_cols=42 Identities=7% Similarity=0.248 Sum_probs=38.3
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCc
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCE 257 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~ 257 (445)
.++++||.||++||+.|+. .|.++++.++++. .+.|..|+++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 4578999999999999999 9999999999986 5999999986
No 231
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.33 E-value=5.3e-07 Score=76.24 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=70.5
Q ss_pred eeccccccchhhhccCCCCEEEEEecCC-C------ChHHHHHHHHHhhcc-ceEEEEeecCCChHHHHHcCCCCCCeEE
Q 013319 314 KRISLNRIEFTFDAKARLPSVLLLSTKK-E------TPIIWRVLSGMYHER-LNFYDTEVHDVSDPAVKKLGVDALPAIV 385 (445)
Q Consensus 314 ~~i~~~~~~~~~~~~~~~~~vvlF~~~~-~------~~~~~~~lA~~~~~~-~~f~~~~v~~~~~~l~~~f~V~~~Ptlv 385 (445)
..++.++++... ....+++|+|+... . ..+.+.+||.+|.++ ++|+.++++ .+++++.+|+|.+.||++
T Consensus 20 ~~~t~~~F~~~v--~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD-e~~~lA~~ygV~sIPTli 96 (140)
T 2qgv_A 20 TPVSESRLDDWL--TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE-QSEAIGDRFGAFRFPATL 96 (140)
T ss_dssp EECCHHHHHHHH--HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH-HHHHHHHHHTCCSSSEEE
T ss_pred ccCCHHHHHHHH--hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC-CCHHHHHHcCCccCCEEE
Confidence 344444444333 35667888887543 2 489999999999999 999888766 679999999999999999
Q ss_pred EEccCCcccccccccChhhHHHHHHH
Q 013319 386 GWLSNGEKDVLKTGISVKDQKSSIHE 411 (445)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (445)
+|+.++......+-.+.+++++++..
T Consensus 97 lFk~G~~v~~~~G~~~k~~l~~~i~~ 122 (140)
T 2qgv_A 97 VFTGGNYRGVLNGIHPWAELINLMRG 122 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHH
T ss_pred EEECCEEEEEEecCCCHHHHHHHHHH
Confidence 88877776666666666666555543
No 232
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.30 E-value=3.4e-06 Score=74.42 Aligned_cols=83 Identities=10% Similarity=0.132 Sum_probs=60.1
Q ss_pred CCCceeccccccchhhhccCCCCEEEEEec----C---CC-----ChHHHHHHHHHhh-----ccceEEEEeecCCChHH
Q 013319 310 PRFSKRISLNRIEFTFDAKARLPSVLLLST----K---KE-----TPIIWRVLSGMYH-----ERLNFYDTEVHDVSDPA 372 (445)
Q Consensus 310 p~~~~~i~~~~~~~~~~~~~~~~~vvlF~~----~---~~-----~~~~~~~lA~~~~-----~~~~f~~~~v~~~~~~l 372 (445)
++.+..++.++++.......+.+++|+|+. . +. ..+.|..||..+. +++.|+.+++. .++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d-~~~~l 95 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN-EVPQL 95 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT-TCHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc-cCHHH
Confidence 333444455555433333345678888887 2 21 2689999999998 88899877766 68999
Q ss_pred HHHcCCCCCCeEEEEccCCcc
Q 013319 373 VKKLGVDALPAIVGWLSNGEK 393 (445)
Q Consensus 373 ~~~f~V~~~Ptlv~~~~~~~~ 393 (445)
+++|+|.++|||++|.+++..
T Consensus 96 a~~~~I~siPtl~~F~~g~~~ 116 (178)
T 3ga4_A 96 VKDLKLQNVPHLVVYPPAESN 116 (178)
T ss_dssp HHHTTCCSSCEEEEECCCCGG
T ss_pred HHHcCCCCCCEEEEEcCCCCC
Confidence 999999999999999986643
No 233
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.30 E-value=1.2e-06 Score=77.94 Aligned_cols=42 Identities=7% Similarity=0.250 Sum_probs=38.2
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCc
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCE 257 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~ 257 (445)
.++++||.||++||+.|+. .|.+.++.++++. .+.+..|+++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 3568999999999999999 9999999999986 5999999986
No 234
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.29 E-value=1.7e-06 Score=76.51 Aligned_cols=90 Identities=16% Similarity=0.241 Sum_probs=63.5
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc-------c----hhhHhH-hCCccC----------
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET-------E----ASLCKE-LGVHRP---------- 271 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~-------~----~~lc~~-~~I~~~---------- 271 (445)
.++++||.||++||+.|+. .|.++++.+++++ .+.+..|+++. . .+.+++ +++..-
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 4569999999999999999 9999999999987 59999998864 2 345666 554310
Q ss_pred --------------CCcE----EEEeccCCCCCCCee-eecCcccHHHHHHHHHhhC
Q 013319 272 --------------RSPR----IFAYSYKAGDKGSLV-EYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 272 --------------~~Pt----i~~f~~~~~~~g~~~-~y~g~~~~~~l~~fi~~~l 309 (445)
..|+ .+++ .++|+++ .|.|..+.+.|.+.|.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~li----d~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLV----NPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEE----CTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEE----CCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 0255 4554 2456554 4777777766666665544
No 235
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.28 E-value=1.2e-06 Score=79.57 Aligned_cols=42 Identities=14% Similarity=0.176 Sum_probs=38.2
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCc
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCE 257 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~ 257 (445)
.++++||.||++||++|+. .|.++++.+++++ .+.|..|+|+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 3568999999999999999 9999999999986 5999999996
No 236
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.26 E-value=6.1e-06 Score=68.53 Aligned_cols=97 Identities=8% Similarity=0.131 Sum_probs=76.2
Q ss_pred Cccccc-ChhhHHHHhhcCCcEEEEEEECCCCccCCChhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEE
Q 013319 199 GNIRAL-NLQVFKKEIVEKGMTWLLFFYSPSSNRDGYESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 199 ~~V~~L-t~~~f~~~v~~~~~~~lV~Fyap~C~~C~~~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~ 277 (445)
+.+..| +.+++++.+ ..+.+++|-|+++||+.| .+.|.++|+.+ ..+.|+.++ +..+++++++. . |+|+
T Consensus 21 ~~~~~i~s~~e~e~fi-~~~~v~VVGfF~~~~~~~--~~~F~~~A~~~-~d~~F~~t~---~~~v~~~~~v~-~--~~vv 90 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEFI-AATEVAVIGFFQDLEIPA--VPILHSMVQKF-PGVSFGIST---DSEVLTHYNIT-G--NTIC 90 (124)
T ss_dssp CCCEECCSHHHHHHHH-HTSSEEEEEECSCTTSTH--HHHHHHHHHHC-TTSEEEEEC---CHHHHHHTTCC-S--SCEE
T ss_pred CcceEcCCHHHHHHHH-hcCCCEEEEEECCCCChh--HHHHHHHHHhC-CCceEEEEC---hHHHHHHcCCC-C--CeEE
Confidence 334556 456776655 567789999999998776 78999999999 789999886 47799999998 6 9999
Q ss_pred EeccCCCCCCCeeeecC----cccHHHHHHHHHhh
Q 013319 278 AYSYKAGDKGSLVEYNE----HLVAKNLKSFCRDH 308 (445)
Q Consensus 278 ~f~~~~~~~g~~~~y~g----~~~~~~l~~fi~~~ 308 (445)
+|.+. ......|.| ..+.++|.+||..+
T Consensus 91 lfkkf---de~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 91 LFRLV---DNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EEETT---TTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEEcC---CCCceeecCcccCCCCHHHHHHHHHHh
Confidence 99532 234567886 67899999999864
No 237
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.26 E-value=1.6e-06 Score=77.97 Aligned_cols=87 Identities=16% Similarity=0.179 Sum_probs=68.0
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc----------------------------chhhHhH
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET----------------------------EASLCKE 265 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~----------------------------~~~lc~~ 265 (445)
++++||.|| ++||++|.. .|.+.+++++++. .+.|..|+++. +..+++.
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 113 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSED 113 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHH
Confidence 468999999 999999999 9999999999976 69999999874 2367889
Q ss_pred hCCc------cCCCcEEEEeccCCCCCCCeee-ecC----cccHHHHHHHHHhhC
Q 013319 266 LGVH------RPRSPRIFAYSYKAGDKGSLVE-YNE----HLVAKNLKSFCRDHL 309 (445)
Q Consensus 266 ~~I~------~~~~Pti~~f~~~~~~~g~~~~-y~g----~~~~~~l~~fi~~~l 309 (445)
|+|. .+ |+++++. .+|.++. +.| .++.+++.+.|....
T Consensus 114 ~gv~~~~~~~~~--P~~~lid----~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 114 YGVLKTDEGIAY--RGLFIID----GKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp TTCEETTTTEEC--EEEEEEC----TTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCcee--eEEEEEC----CCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 9998 78 9988882 4565443 334 245678888887553
No 238
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.23 E-value=1.1e-05 Score=66.83 Aligned_cols=84 Identities=8% Similarity=0.005 Sum_probs=62.7
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhh-----ccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcc--cc
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYH-----ERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEK--DV 395 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~-----~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~--~~ 395 (445)
..+++++|.|+..+. ..+.|..+|..+. +.+.|+.+++. .+.+++++|+|.++||+++|..++.. ..
T Consensus 31 ~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~ 109 (127)
T 3h79_A 31 DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE-KYPDVIERMRVSGFPTMRYYTRIDKQEPFE 109 (127)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT-TCHHHHHHTTCCSSSEEEEECSSCSSSCEE
T ss_pred CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc-ccHhHHHhcCCccCCEEEEEeCCCCCCceE
Confidence 346788888887653 2578999988764 44666554433 67899999999999999999887653 46
Q ss_pred cccccChhhHHHHHHHH
Q 013319 396 LKTGISVKDQKSSIHEL 412 (445)
Q Consensus 396 ~~~~~~~~~~~~~~~~~ 412 (445)
|.+..+.+++++++..+
T Consensus 110 ~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 110 YSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CCSCCCHHHHHHHHHHH
T ss_pred ecCCccHHHHHHHHHhc
Confidence 88888888887777643
No 239
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.23 E-value=3.6e-06 Score=75.18 Aligned_cols=87 Identities=9% Similarity=0.104 Sum_probs=67.1
Q ss_pred CCcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc----------------------------chhhHh
Q 013319 216 KGMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET----------------------------EASLCK 264 (445)
Q Consensus 216 ~~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~----------------------------~~~lc~ 264 (445)
.++++||.|| ++||++|+. .|.+.+++++++. .+.+..|+++. +..+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 3468999999 999999999 9999999999974 68899998874 235788
Q ss_pred HhCCc-----cCCCcEEEEeccCCCCCCCeee-ecCc----ccHHHHHHHHHhh
Q 013319 265 ELGVH-----RPRSPRIFAYSYKAGDKGSLVE-YNEH----LVAKNLKSFCRDH 308 (445)
Q Consensus 265 ~~~I~-----~~~~Pti~~f~~~~~~~g~~~~-y~g~----~~~~~l~~fi~~~ 308 (445)
.|+|. .+ |+++++. .+|++.. +.|. ++.++|.+.|...
T Consensus 110 ~~gv~~~~g~~~--P~~~liD----~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 110 SYDVLFNESVAL--RAFVLID----KQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HTTCEETTTEEC--CEEEEEC----TTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HhCCcCcCCcee--eEEEEEc----CCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 99999 88 9999982 4565443 3343 3467777777654
No 240
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.22 E-value=9e-06 Score=65.10 Aligned_cols=84 Identities=14% Similarity=0.268 Sum_probs=64.4
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+.... ..+.+..++..+.+++.|+.+++. .++.++++|+|..+||+++|..++....+.+..+.
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~ 98 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVE-EEKTLFQRFSLKGVPQILYFKDGEYKGKMAGDVED 98 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETT-TCHHHHHHTTCCSSCEEEEEETTEEEEEEESSCCH
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECC-cChhHHHhcCCCcCCEEEEEECCEEEEEEeccCCH
Confidence 456788888887653 257889999999888888776654 67899999999999999988555555567777777
Q ss_pred hhHHHHHHHH
Q 013319 403 KDQKSSIHEL 412 (445)
Q Consensus 403 ~~~~~~~~~~ 412 (445)
+++.+++..+
T Consensus 99 ~~l~~~l~~~ 108 (111)
T 3gnj_A 99 DEVEQMIADV 108 (111)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777666654
No 241
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.22 E-value=3.5e-06 Score=67.78 Aligned_cols=88 Identities=9% Similarity=0.068 Sum_probs=60.9
Q ss_pred cchhhhccCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccc
Q 013319 321 IEFTFDAKARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDV 395 (445)
Q Consensus 321 ~~~~~~~~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~ 395 (445)
++.......+++++|.|+..+. ..+.+..+|..+.+ +.|+.+++. .+++++++|+|+++||+++|..++....
T Consensus 11 f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d-~~~~l~~~~~V~~~PT~~~~~~G~~v~~ 88 (105)
T 3zzx_A 11 FTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVD-ECEDIAQDNQIACMPTFLFMKNGQKLDS 88 (105)
T ss_dssp HHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETT-TCHHHHHHTTCCBSSEEEEEETTEEEEE
T ss_pred HHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecc-cCHHHHHHcCCCeecEEEEEECCEEEEE
Confidence 3333334456788888887654 26788999988864 567555544 6799999999999999998865555555
Q ss_pred cccccChhhHHHHHHH
Q 013319 396 LKTGISVKDQKSSIHE 411 (445)
Q Consensus 396 ~~~~~~~~~~~~~~~~ 411 (445)
+.| .+.+++++++.+
T Consensus 89 ~~G-~~~~~l~~~i~k 103 (105)
T 3zzx_A 89 LSG-ANYDKLLELVEK 103 (105)
T ss_dssp EES-CCHHHHHHHHHH
T ss_pred EeC-cCHHHHHHHHHh
Confidence 544 566666665554
No 242
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.22 E-value=1.3e-05 Score=64.55 Aligned_cols=101 Identities=19% Similarity=0.176 Sum_probs=67.3
Q ss_pred CCCCceeccccccchhhhccCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCe
Q 013319 309 LPRFSKRISLNRIEFTFDAKARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPA 383 (445)
Q Consensus 309 lp~~~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Pt 383 (445)
+++.+..++.++++... ...+++++|+|+..... .+.+..++..+.+++.|+.+++. .+.+++++|+|..+|+
T Consensus 5 ~~~~v~~l~~~~~~~~~-~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~-~~~~~~~~~~v~~~Pt 82 (115)
T 1thx_A 5 MSKGVITITDAEFESEV-LKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEID-PNPTTVKKYKVEGVPA 82 (115)
T ss_dssp -CCSEEECCGGGHHHHT-TTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEEST-TCHHHHHHTTCCSSSE
T ss_pred ccCceEEeeccchhhHh-hcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcC-CCHHHHHHcCCCceeE
Confidence 34333444444333222 34567888888776432 56788999999888888766654 5788999999999999
Q ss_pred EEEEccCCc-ccccccccChhhHHHHHHHH
Q 013319 384 IVGWLSNGE-KDVLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 384 lv~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 412 (445)
++++ ++++ ...+.+..+.+++..++..+
T Consensus 83 ~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 83 LRLV-KGEQILDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp EEEE-ETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEE-cCCEEEEEecCCCCHHHHHHHHHHH
Confidence 9988 5554 44466666676776655543
No 243
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.21 E-value=5.7e-06 Score=69.38 Aligned_cols=100 Identities=11% Similarity=0.155 Sum_probs=69.8
Q ss_pred cCCCCEEEEEecCCC----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCC--CCeEEEEcc-CCcccccc--c
Q 013319 328 KARLPSVLLLSTKKE----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDA--LPAIVGWLS-NGEKDVLK--T 398 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~--~Ptlv~~~~-~~~~~~~~--~ 398 (445)
....|++++|+..+. ..+.+..+|.+|++++.|+.+++. .++.++++|||.+ .||++++.. ++....+. +
T Consensus 21 ~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d-~~~~~a~~~gi~~~~iPtl~i~~~~~g~~~~~~~~g 99 (133)
T 2djk_A 21 SAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAK-AFGAHAGNLNLKTDKFPAFAIQEVAKNQKFPFDQEK 99 (133)
T ss_dssp HTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTT-TTGGGTTTTTCCSSSSSEEEEECTTTCCBCCCCSSS
T ss_pred cCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchH-HhHHHHHHcCCCcccCCEEEEEecCcCcccCCCCcc
Confidence 456688888876533 267899999999999999887755 5678999999999 999998886 34333332 5
Q ss_pred ccChhhHHHHHHHHHhhhhhhhhcccccccCCCccchhcc
Q 013319 399 GISVKDQKSSIHELSKLLDGLKKRTKRQLPHGLANHIVIQ 438 (445)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~l~~~~~~~ 438 (445)
..+.++|++++. +++. ..+.|.+.|+.+++
T Consensus 100 ~~~~~~l~~fi~-------~~l~---Gkl~p~~kSe~iP~ 129 (133)
T 2djk_A 100 EITFEAIKAFVD-------DFVA---GKIEPSIKSEPIPE 129 (133)
T ss_dssp CCCHHHHHHHHH-------HHHH---TCCCCSSCCCCCCT
T ss_pred ccCHHHHHHHHH-------HHHc---CCcCccccCCCCCC
Confidence 556666655554 3332 23556666776664
No 244
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.21 E-value=1.8e-06 Score=75.90 Aligned_cols=81 Identities=9% Similarity=0.114 Sum_probs=63.4
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC---------------------------------------
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC--------------------------------------- 256 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc--------------------------------------- 256 (445)
..+.||.|+++||++|+. .|.++++.+++.. +++..++.
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~~ 100 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKANE 100 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCSH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCCH
Confidence 458999999999999999 9999999988754 66666553
Q ss_pred ------------------------------ccchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHH
Q 013319 257 ------------------------------ETEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCR 306 (445)
Q Consensus 257 ------------------------------~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~ 306 (445)
..+..+++++||.++ ||+++ +| ..+.|..+.+.|.+.|.
T Consensus 101 ~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gt--Pt~~i-------~g--~~~~G~~~~~~l~~~i~ 169 (175)
T 3gyk_A 101 TGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGT--PSFVV-------ED--ALVPGFVEQSQLQDAVD 169 (175)
T ss_dssp HHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSS--SEEEE-------TT--EEECSCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccC--CEEEE-------CC--EEeeCCCCHHHHHHHHH
Confidence 233457788999999 99987 23 35678888899988887
Q ss_pred hhC
Q 013319 307 DHL 309 (445)
Q Consensus 307 ~~l 309 (445)
+.+
T Consensus 170 ~~l 172 (175)
T 3gyk_A 170 RAR 172 (175)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 245
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.18 E-value=3.8e-06 Score=76.99 Aligned_cols=87 Identities=13% Similarity=0.190 Sum_probs=67.7
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc----------------------------chhhHhH
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET----------------------------EASLCKE 265 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~----------------------------~~~lc~~ 265 (445)
++++||.|| ++||+.|+. .|.+.+++++++. .+.|..|+++. +..+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 468999999 999999999 9999999999974 69999998864 2467889
Q ss_pred hCCc------cCCCcEEEEeccCCCCCCCeee-ecCc----ccHHHHHHHHHhhC
Q 013319 266 LGVH------RPRSPRIFAYSYKAGDKGSLVE-YNEH----LVAKNLKSFCRDHL 309 (445)
Q Consensus 266 ~~I~------~~~~Pti~~f~~~~~~~g~~~~-y~g~----~~~~~l~~fi~~~l 309 (445)
|+|. .+ |+++++. .+|+++. +.|. ++.++|.+.|....
T Consensus 136 ygv~~~~~g~~~--P~~~liD----~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 136 YGVLLEGPGLAL--RGLFIID----PNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp TTCEETTTTEEC--EEEEEEC----TTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred hCCeecCCCccc--ceEEEEC----CCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 9998 88 9999992 4555443 3343 45677877776543
No 246
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.17 E-value=2.8e-06 Score=76.61 Aligned_cols=87 Identities=14% Similarity=0.127 Sum_probs=67.8
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc----------------------------chhhHhH
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET----------------------------EASLCKE 265 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~----------------------------~~~lc~~ 265 (445)
++++||.|| ++||++|.. .|.+.+++++++. .+.|..|+++. +..+++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 468999999 999999999 9999999999976 69999999874 2467889
Q ss_pred hCCc------cCCCcEEEEeccCCCCCCCeee-ecCc----ccHHHHHHHHHhhC
Q 013319 266 LGVH------RPRSPRIFAYSYKAGDKGSLVE-YNEH----LVAKNLKSFCRDHL 309 (445)
Q Consensus 266 ~~I~------~~~~Pti~~f~~~~~~~g~~~~-y~g~----~~~~~l~~fi~~~l 309 (445)
|+|. .+ |+++++. .+|+++. +.|. ++.++|.+.|....
T Consensus 116 ygv~~~~~g~~~--P~~~lid----~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 116 YGVLKEEDGVAY--RGLFIID----PKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HTCEETTTTEEC--EEEEEEC----TTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCcee--eEEEEEC----CCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 9999 88 9999982 4565443 3332 35578887776543
No 247
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.17 E-value=1.3e-05 Score=64.46 Aligned_cols=83 Identities=8% Similarity=0.128 Sum_probs=60.2
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+..... .+.+..++..+.+.+.|+.+++. .+.+++++|+|.++||++++..++....+.+..+.
T Consensus 21 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 99 (112)
T 1t00_A 21 KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNID-ENPGTAAKYGVMSIPTLNVYQGGEVAKTIVGAKPK 99 (112)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcC-CCHHHHHhCCCCcccEEEEEeCCEEEEEEeCCCCH
Confidence 4567888888876532 46788899999878888666544 57899999999999999988544444456666666
Q ss_pred hhHHHHHHH
Q 013319 403 KDQKSSIHE 411 (445)
Q Consensus 403 ~~~~~~~~~ 411 (445)
+++.+++..
T Consensus 100 ~~l~~~l~~ 108 (112)
T 1t00_A 100 AAIVRDLED 108 (112)
T ss_dssp HHHHHHTHH
T ss_pred HHHHHHHHH
Confidence 666555543
No 248
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.17 E-value=1.3e-05 Score=69.93 Aligned_cols=89 Identities=13% Similarity=0.250 Sum_probs=64.1
Q ss_pred CCcEEEEEEECCCCc-cCCC-hhHHHHHHHHhcC---ccEEEEEeCcc---c----hhhHhHh-----------------
Q 013319 216 KGMTWLLFFYSPSSN-RDGY-ESVIEEVANSMEG---ALKVGSINCET---E----ASLCKEL----------------- 266 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~-~C~~-~p~~~~~a~~l~~---~v~~~~Vdc~~---~----~~lc~~~----------------- 266 (445)
.++++||.||++||+ +|.. .|.+.++.++++. .+.|..|+++. . ...++++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 356899999999999 9999 9999999999875 39999999872 1 1122222
Q ss_pred --------------------CCccCCCcEEEEeccCCCCCCCeee-ecCcc--cHHHHHHHHHhhCC
Q 013319 267 --------------------GVHRPRSPRIFAYSYKAGDKGSLVE-YNEHL--VAKNLKSFCRDHLP 310 (445)
Q Consensus 267 --------------------~I~~~~~Pti~~f~~~~~~~g~~~~-y~g~~--~~~~l~~fi~~~lp 310 (445)
++... |+++++ .++|+++. +.|.. +.++|.+.|.+.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~li----d~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQ--SSFYLV----GPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSC--CEEEEE----CTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeee--eEEEEE----CCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 23445 887777 24565544 56654 46889998887664
No 249
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.17 E-value=5.5e-06 Score=71.97 Aligned_cols=87 Identities=14% Similarity=0.145 Sum_probs=63.2
Q ss_pred CcEEEEEEECCC-CccCCC-hhHHHHHHHHhcCccEEEEEeCcc-----------------------chhhHhHhCCccC
Q 013319 217 GMTWLLFFYSPS-SNRDGY-ESVIEEVANSMEGALKVGSINCET-----------------------EASLCKELGVHRP 271 (445)
Q Consensus 217 ~~~~lV~Fyap~-C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~-----------------------~~~lc~~~~I~~~ 271 (445)
+++++|.||+.| |++|+. .|.+.++.+++ ..+.+..|+++. +..+++.|+|...
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~ 122 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIK 122 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBT
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccc
Confidence 568999999999 999999 99999999999 778999998874 2356677887651
Q ss_pred ----CCcEEEEeccCCCCCCCeee-ecCc-----ccHHHHHHHHHhh
Q 013319 272 ----RSPRIFAYSYKAGDKGSLVE-YNEH-----LVAKNLKSFCRDH 308 (445)
Q Consensus 272 ----~~Pti~~f~~~~~~~g~~~~-y~g~-----~~~~~l~~fi~~~ 308 (445)
.+|+.+++. ++|+++. +.|. .+.++|.+.+.+.
T Consensus 123 ~~g~~~p~~~lid----~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 123 ELRLLARSVFVLD----ENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp TTCSBCCEEEEEC----TTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred cCCceeeEEEEEc----CCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 128888872 4565444 4332 2346777777654
No 250
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.16 E-value=2.7e-05 Score=64.40 Aligned_cols=83 Identities=8% Similarity=0.049 Sum_probs=63.3
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCc-ccccccccC
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGE-KDVLKTGIS 401 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~-~~~~~~~~~ 401 (445)
..+++++|.|+..+. ..+.+..++..+.+.+.|+.+++. .+..++++|+|..+||+++|..++. ...+.+..+
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~ 111 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNAD-KHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRT 111 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETT-TCHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCS
T ss_pred cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCC-CCHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCC
Confidence 456788888876543 367889999999888888666544 6788999999999999999988776 556777777
Q ss_pred hhhHHHHHHH
Q 013319 402 VKDQKSSIHE 411 (445)
Q Consensus 402 ~~~~~~~~~~ 411 (445)
.+++..++..
T Consensus 112 ~~~l~~~l~~ 121 (130)
T 2dml_A 112 GEAIVDAALS 121 (130)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7666555543
No 251
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.14 E-value=2.6e-06 Score=77.85 Aligned_cols=79 Identities=16% Similarity=0.233 Sum_probs=58.7
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEe----------------------------------------
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSIN---------------------------------------- 255 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vd---------------------------------------- 255 (445)
.++.|+.|+++||++|+. .|.++++++. .+.+..+.
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~ 162 (216)
T 1eej_A 86 EKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPAS 162 (216)
T ss_dssp CCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhH
Confidence 458999999999999999 9999998763 24443321
Q ss_pred C----ccchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhh
Q 013319 256 C----ETEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDH 308 (445)
Q Consensus 256 c----~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~ 308 (445)
| +++..+++++||+++ ||+++. +|. .+.|..+.++|.+++.+.
T Consensus 163 ~~~~v~~~~~l~~~~gV~gt--Pt~v~~------dG~--~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 163 CDVDIADHYALGVQLGVSGT--PAVVLS------NGT--LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CSCCHHHHHHHHHHHTCCSS--SEEECT------TSC--EEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcc--CEEEEc------CCe--EecCCCCHHHHHHHHHHh
Confidence 2 234578899999999 999542 343 456877888999888754
No 252
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.12 E-value=1.3e-05 Score=67.73 Aligned_cols=91 Identities=11% Similarity=0.086 Sum_probs=67.8
Q ss_pred ccCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccC
Q 013319 327 AKARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGIS 401 (445)
Q Consensus 327 ~~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~ 401 (445)
...+++++|.|+..... .+.+..++..+.+++.|+.+++. .++.++++|+|.++||+++|..++....+.+..+
T Consensus 21 ~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~ 99 (140)
T 3hz4_A 21 EDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIA-TNPWTAEKYGVQGTPTFKFFCHGRPVWEQVGQIY 99 (140)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETT-TCHHHHHHHTCCEESEEEEEETTEEEEEEESSCC
T ss_pred HhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECC-cCHhHHHHCCCCcCCEEEEEeCCcEEEEEcCCCC
Confidence 34577889988876542 57889999999988888666554 6789999999999999998855545556777777
Q ss_pred hhhHHHHHHHHHhhhhh
Q 013319 402 VKDQKSSIHELSKLLDG 418 (445)
Q Consensus 402 ~~~~~~~~~~~~~~l~~ 418 (445)
.+++.+++..+...-..
T Consensus 100 ~~~l~~~l~~~l~~~~~ 116 (140)
T 3hz4_A 100 PSILKNAVRDMLQHGEE 116 (140)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccc
Confidence 77777776666544333
No 253
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.12 E-value=2.1e-05 Score=72.90 Aligned_cols=42 Identities=10% Similarity=0.082 Sum_probs=36.7
Q ss_pred CcEEEEEEE-CCCCccCC-C-hhHHHHHHHHhcC-cc-EEEEEeCcc
Q 013319 217 GMTWLLFFY-SPSSNRDG-Y-ESVIEEVANSMEG-AL-KVGSINCET 258 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~-~-~p~~~~~a~~l~~-~v-~~~~Vdc~~ 258 (445)
++++||.|| +.||+.|. . .|.+.+++++++. .+ .+..|+.+.
T Consensus 33 gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~ 79 (241)
T 1nm3_A 33 NKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVND 79 (241)
T ss_dssp TSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCC
Confidence 457889999 99999999 9 9999999999875 68 899998875
No 254
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.11 E-value=5.4e-06 Score=70.58 Aligned_cols=111 Identities=14% Similarity=0.177 Sum_probs=59.6
Q ss_pred ceeccccccchhhhccCCCCEEEEEecCC-------CChHHHHHHHHHhhccce--EEEEeecCCChHHHHHcCCCCCCe
Q 013319 313 SKRISLNRIEFTFDAKARLPSVLLLSTKK-------ETPIIWRVLSGMYHERLN--FYDTEVHDVSDPAVKKLGVDALPA 383 (445)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~vvlF~~~~-------~~~~~~~~lA~~~~~~~~--f~~~~v~~~~~~l~~~f~V~~~Pt 383 (445)
...++.++++... ......+|+|+... ...+.+.++|.+| +++. |+.++++ .+++++++|+|.++||
T Consensus 19 ~~~l~~~~f~~~i--~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d-~~~~la~~~~V~~iPT 94 (142)
T 2es7_A 19 WQPVEASTVDDWI--KRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLE-QSEAIGDRFNVRRFPA 94 (142)
T ss_dssp CEECCCC----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHH-HHHHHHHTTTCCSSSE
T ss_pred CcccccccHHHHH--HhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECC-CCHHHHHhcCCCcCCe
Confidence 3444544444333 23335677775432 2478899999999 7888 8666554 5688999999999999
Q ss_pred EEEEccCCcccccccccChhhHHHHHHHHHhhhhhhhhcccccccCCCccc
Q 013319 384 IVGWLSNGEKDVLKTGISVKDQKSSIHELSKLLDGLKKRTKRQLPHGLANH 434 (445)
Q Consensus 384 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~l~~~ 434 (445)
+++|+.++....+.+..+.+++++++.. ++........++|.+|
T Consensus 95 ~~~fk~G~~v~~~~G~~~~~~l~~~i~~-------~l~~~~~~~~~~~~~~ 138 (142)
T 2es7_A 95 TLVFTDGKLRGALSGIHPWAELLTLMRS-------IVDTPAAQETVQLEHH 138 (142)
T ss_dssp EEEESCC----CEESCCCHHHHHHHHHH-------HHC-------------
T ss_pred EEEEeCCEEEEEEeCCCCHHHHHHHHHH-------HhcccccCCCchhhcc
Confidence 9999555555667676676666555543 3333334455555443
No 255
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.11 E-value=1.9e-05 Score=67.21 Aligned_cols=84 Identities=12% Similarity=0.169 Sum_probs=64.0
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+..+-. .+.+..++..+.+++.|+.+++. .+..++++|+|.++||+++|..++....+.+..+.
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 131 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTE-AEPALSTRFRIRSIPTIMLYRNGKMIDMLNGAVPK 131 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCH
T ss_pred hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECc-CCHHHHHHCCCCccCEEEEEECCeEEEEEeCCCCH
Confidence 5677889988876542 57899999999888888666544 67899999999999999988644445567777777
Q ss_pred hhHHHHHHHH
Q 013319 403 KDQKSSIHEL 412 (445)
Q Consensus 403 ~~~~~~~~~~ 412 (445)
+++..++..+
T Consensus 132 ~~l~~~l~~~ 141 (148)
T 3p2a_A 132 APFDNWLDEQ 141 (148)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7776666544
No 256
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.08 E-value=2.3e-05 Score=65.90 Aligned_cols=82 Identities=20% Similarity=0.258 Sum_probs=63.7
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..+.. .+.+..++..+.+++.|+.+.+. .+.+++++|+|..+|++++|.+++....+.+..+.+
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~ 128 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVD-KEPELARDFGIQSIPTIWFVPMKGEPQVNMGALSKE 128 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETT-TCHHHHHHTTCCSSSEEEEECSSSCCEEEESCCCHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECC-CCHHHHHHcCCCCcCEEEEEeCCCCEEEEeCCCCHH
Confidence 467889988875532 57889999999988888666554 678999999999999999998877766777777777
Q ss_pred hHHHHHHH
Q 013319 404 DQKSSIHE 411 (445)
Q Consensus 404 ~~~~~~~~ 411 (445)
++..++..
T Consensus 129 ~l~~~l~~ 136 (141)
T 3hxs_A 129 QLKGYIDK 136 (141)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76555543
No 257
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.08 E-value=7.2e-06 Score=73.86 Aligned_cols=89 Identities=16% Similarity=0.182 Sum_probs=61.9
Q ss_pred CcEEEEEEECCCCcc-CCC-hhHHHHHHHHhc----CccEEEEEeCccc----------------------------hhh
Q 013319 217 GMTWLLFFYSPSSNR-DGY-ESVIEEVANSME----GALKVGSINCETE----------------------------ASL 262 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~-C~~-~p~~~~~a~~l~----~~v~~~~Vdc~~~----------------------------~~l 262 (445)
++++||.||++||++ |.. .|.+.++.+++. ..+.+..|+++.+ ..+
T Consensus 41 Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~ 120 (200)
T 2b7k_A 41 GKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNA 120 (200)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHHH
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHHH
Confidence 568999999999998 999 999999887775 3689999998731 246
Q ss_pred HhHhCCc-cC-------------CCcEEEEeccCCCCCCCeee-ecCcccHHHHHHHHHhhC
Q 013319 263 CKELGVH-RP-------------RSPRIFAYSYKAGDKGSLVE-YNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 263 c~~~~I~-~~-------------~~Pti~~f~~~~~~~g~~~~-y~g~~~~~~l~~fi~~~l 309 (445)
++.|+|. .. -+|+++++ .++|.++. +.|..+.+.+.+.|.+.+
T Consensus 121 ~~~~gv~~~~p~~~~~~~~~~~~~~~~~~li----D~~G~i~~~~~g~~~~~~~~~~i~~~l 178 (200)
T 2b7k_A 121 CKKYRVYFSTPPNVKPGQDYLVDHSIFFYLM----DPEGQFVDALGRNYDEKTGVDKIVEHV 178 (200)
T ss_dssp HHHTTC--------------CTTTCCCEEEE----CTTSCEEEEECTTCCTTHHHHHHHHHH
T ss_pred HHHcCcEEeeccccCCCCCceeeecceEEEE----CCCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 7888886 33 01366666 24566554 666666666666666544
No 258
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.08 E-value=5e-06 Score=75.80 Aligned_cols=87 Identities=9% Similarity=0.082 Sum_probs=66.7
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc----------------------------chhhHhH
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET----------------------------EASLCKE 265 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~----------------------------~~~lc~~ 265 (445)
++++||.|| ++||+.|+. .|.+.+++++++. .+.|..|+++. +..+++.
T Consensus 52 gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 131 (213)
T 2i81_A 52 KKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKD 131 (213)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHH
Confidence 467999999 999999999 9999999999974 68999998764 2457888
Q ss_pred hCCc-----cCCCcEEEEeccCCCCCCCeee-ecCc----ccHHHHHHHHHhhC
Q 013319 266 LGVH-----RPRSPRIFAYSYKAGDKGSLVE-YNEH----LVAKNLKSFCRDHL 309 (445)
Q Consensus 266 ~~I~-----~~~~Pti~~f~~~~~~~g~~~~-y~g~----~~~~~l~~fi~~~l 309 (445)
|+|. .. |+++++. .+|+++. +.|. ++.++|.+.|....
T Consensus 132 ygv~~~~g~~~--p~~~lID----~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 132 YNVLFDDSVSL--RAFVLID----MNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp TTCEETTTEEC--EEEEEEC----TTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred hCCccccCCcc--cEEEEEC----CCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 9998 78 9998882 4565443 3332 35678888776543
No 259
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.07 E-value=2.3e-05 Score=62.39 Aligned_cols=84 Identities=12% Similarity=0.115 Sum_probs=60.9
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|+|+..... .+.+..++..+.+++.|+.+++. .+++++++|+|..+||++++..++....+.+..+.
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 96 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID-QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSK 96 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT-TCTTHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECC-CCHHHHHHcCCcccCEEEEEeCCEEEEEEecCCCH
Confidence 4567888888875532 56788999999888888666544 56889999999999999988433334456666677
Q ss_pred hhHHHHHHHH
Q 013319 403 KDQKSSIHEL 412 (445)
Q Consensus 403 ~~~~~~~~~~ 412 (445)
+++.+++..+
T Consensus 97 ~~l~~~l~~~ 106 (108)
T 2trx_A 97 GQLKEFLDAN 106 (108)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7776666543
No 260
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.07 E-value=1.2e-05 Score=63.88 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=62.3
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+.+++.|+.+.+. .++.++++|+|.++||++++..+.....+.+..+.+
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~ 98 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVD-ENQKIADKYSVLNIPTTLIFVNGQLVDSLVGAVDED 98 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHH
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccc-cCHHHHHhcCcccCCEEEEEcCCcEEEeeeccCCHH
Confidence 367888888876532 57889999999988888666544 678999999999999999884444455666767777
Q ss_pred hHHHHHHHH
Q 013319 404 DQKSSIHEL 412 (445)
Q Consensus 404 ~~~~~~~~~ 412 (445)
++.+++..+
T Consensus 99 ~l~~~l~~~ 107 (109)
T 3tco_A 99 TLESTVNKY 107 (109)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 776666543
No 261
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.07 E-value=1.7e-05 Score=68.43 Aligned_cols=84 Identities=6% Similarity=0.077 Sum_probs=63.4
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+..+- ..+.+.+++..+.+++.|+.+++. .++.++++|+|..+||+++|..++....+.+..+.
T Consensus 62 ~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~-~~~~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~ 140 (155)
T 2ppt_A 62 RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQ-AHPAVAGRHRIQGIPAFILFHKGRELARAAGARPA 140 (155)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETT-TSTHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCC-ccHHHHHHcCCCcCCEEEEEeCCeEEEEecCCCCH
Confidence 456788999987653 257789999999888888776654 56889999999999999988544445556676677
Q ss_pred hhHHHHHHHH
Q 013319 403 KDQKSSIHEL 412 (445)
Q Consensus 403 ~~~~~~~~~~ 412 (445)
+++.+++..+
T Consensus 141 ~~l~~~l~~~ 150 (155)
T 2ppt_A 141 SELVGFVRGK 150 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7776666544
No 262
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.07 E-value=1.5e-05 Score=63.09 Aligned_cols=81 Identities=9% Similarity=0.086 Sum_probs=61.0
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+.+++.|+.+++. .+.+++++|+|.++||++++..++....+.+..+.+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~ 96 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVD-ENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKE 96 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETT-TCHHHHHHTTCCSBSEEEEEETTEEEEEEESCCCHH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECC-cCHHHHHhCCCcccCEEEEEeCCeEEEEEeCCCCHH
Confidence 667888888865432 57889999999988888766554 678999999999999999886444455666666776
Q ss_pred hHHHHHH
Q 013319 404 DQKSSIH 410 (445)
Q Consensus 404 ~~~~~~~ 410 (445)
++.+++.
T Consensus 97 ~l~~~l~ 103 (106)
T 3die_A 97 NLAEVLD 103 (106)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655554
No 263
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.07 E-value=1.4e-05 Score=65.10 Aligned_cols=80 Identities=14% Similarity=0.173 Sum_probs=58.8
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+.+ +.|+.+++. .+.+++++|+|..+||++++..++....+.+. +.+
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~ 106 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVD-DCQDVASECEVKSMPTFQFFKKGQKVGEFSGA-NKE 106 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETT-TTHHHHHHTTCCSSSEEEEESSSSEEEEEESC-CHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC-CCHHHHHHcCCccccEEEEEeCCeEEEEEcCC-CHH
Confidence 567889988876532 5678888888877 778666544 67899999999999999988555445556555 777
Q ss_pred hHHHHHHH
Q 013319 404 DQKSSIHE 411 (445)
Q Consensus 404 ~~~~~~~~ 411 (445)
++.+++..
T Consensus 107 ~l~~~l~~ 114 (116)
T 3qfa_C 107 KLEATINE 114 (116)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666553
No 264
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.05 E-value=2.7e-05 Score=65.21 Aligned_cols=83 Identities=14% Similarity=0.261 Sum_probs=62.7
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+.+.+.|+.+++. .+.+++++|+|..+||++++..+++...+.+..+.+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~~G~~~~~~G~~~~~ 115 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTE-KEQELAGAFGIRSIPSILFIPMEGKPEMAQGAMPKA 115 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETT-TCHHHHHHTTCCSSCEEEEECSSSCCEEEESCCCHH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCC-CCHHHHHHcCCCCCCEEEEECCCCcEEEEeCCCCHH
Confidence 457889988876542 46788999999888888666544 568899999999999999886666554677777776
Q ss_pred hHHHHHHHH
Q 013319 404 DQKSSIHEL 412 (445)
Q Consensus 404 ~~~~~~~~~ 412 (445)
++.+++..+
T Consensus 116 ~l~~~l~~~ 124 (136)
T 2l5l_A 116 SFKKAIDEF 124 (136)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555543
No 265
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.05 E-value=1.4e-05 Score=66.38 Aligned_cols=83 Identities=16% Similarity=0.189 Sum_probs=61.8
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCc-ccccccccC
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGE-KDVLKTGIS 401 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~-~~~~~~~~~ 401 (445)
..+++++|.|+.... ..+.+.+++..+.+++.|+.+++. .+.+++++|+|..+||+++| .+++ ...+.+..+
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~ 115 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNID-QNPGTAPKYGIRGIPTLLLF-KNGEVAATKVGALS 115 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETT-TCCTTSGGGTCCSSSEEEEE-ETTEEEEEEESCCC
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECC-CCHHHHHHcCCCccCEEEEE-eCCEEEEEEcCCCC
Confidence 456788888876653 367789999999888888666554 56789999999999999988 5544 445666667
Q ss_pred hhhHHHHHHHH
Q 013319 402 VKDQKSSIHEL 412 (445)
Q Consensus 402 ~~~~~~~~~~~ 412 (445)
.+++.+++..+
T Consensus 116 ~~~l~~~l~~~ 126 (128)
T 2o8v_B 116 KGQLKEFLDAN 126 (128)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 77776666543
No 266
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.04 E-value=5.2e-06 Score=75.58 Aligned_cols=78 Identities=15% Similarity=0.180 Sum_probs=58.2
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEe----------------------------------------
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSIN---------------------------------------- 255 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vd---------------------------------------- 255 (445)
..+.|+.|+++||++|+. .|.++++++. + +.+..+.
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~~ 162 (211)
T 1t3b_A 86 EKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVK 162 (211)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSCC
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChHH
Confidence 458999999999999999 9999987652 2 4443221
Q ss_pred Cc----cchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHh
Q 013319 256 CE----TEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRD 307 (445)
Q Consensus 256 c~----~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~ 307 (445)
|. ++..+++++||++. ||+++. +|+ .+.|..+.++|.++|.+
T Consensus 163 ~~~~v~~~~~l~~~~gV~gT--Pt~vi~------nG~--~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 163 TPNIVKKHYELGIQFGVRGT--PSIVTS------TGE--LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CSSHHHHHHHHHHHHTCCSS--CEEECT------TSC--CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcC--CEEEEe------CCE--EecCCCCHHHHHHHHHh
Confidence 11 34567899999999 999883 343 45687788999998865
No 267
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.02 E-value=4e-05 Score=62.55 Aligned_cols=83 Identities=12% Similarity=0.151 Sum_probs=60.8
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCc-ccccccccC
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGE-KDVLKTGIS 401 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~-~~~~~~~~~ 401 (445)
..+++++|+|+..... .+.+..++..+.+.+.|+.+++. .+.+++++|+|..+|+++++ ++++ ...+.+..+
T Consensus 29 ~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d-~~~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~ 106 (119)
T 1w4v_A 29 NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID-DHTDLAIEYEVSAVPTVLAM-KNGDVVDKFVGIKD 106 (119)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETT-TTHHHHHHTTCCSSSEEEEE-ETTEEEEEEESCCC
T ss_pred cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCC-CCHHHHHHcCCCcccEEEEE-eCCcEEEEEcCCCC
Confidence 4567888888865532 46788888888878888666544 56889999999999999988 4444 445666667
Q ss_pred hhhHHHHHHHH
Q 013319 402 VKDQKSSIHEL 412 (445)
Q Consensus 402 ~~~~~~~~~~~ 412 (445)
.+++..++..+
T Consensus 107 ~~~l~~~l~~~ 117 (119)
T 1w4v_A 107 EDQLEAFLKKL 117 (119)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77776666544
No 268
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.01 E-value=1.3e-05 Score=63.61 Aligned_cols=81 Identities=7% Similarity=0.129 Sum_probs=58.1
Q ss_pred ccCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCc-cccccccc
Q 013319 327 AKARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGE-KDVLKTGI 400 (445)
Q Consensus 327 ~~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~-~~~~~~~~ 400 (445)
...+++++|.|+..... .+.+..++..+.+++.|+.+++. .+.+++++|+|.++||++++ ++++ ...+.+..
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~-~~G~~~~~~~G~~ 91 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVD-ENPETTSQFGIMSIPTLILF-KGGRPVKQLIGYQ 91 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETT-TCHHHHHHTTCCSSSEEEEE-ETTEEEEEEESCC
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECc-CCHHHHHHcCCccccEEEEE-eCCeEEEEEecCC
Confidence 34567888888876532 56788899999887888666554 57889999999999999988 5444 44455656
Q ss_pred ChhhHHHHH
Q 013319 401 SVKDQKSSI 409 (445)
Q Consensus 401 ~~~~~~~~~ 409 (445)
+.+++..++
T Consensus 92 ~~~~l~~~l 100 (105)
T 1nsw_A 92 PKEQLEAQL 100 (105)
T ss_dssp CHHHHHHHT
T ss_pred CHHHHHHHH
Confidence 665554443
No 269
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.01 E-value=3e-05 Score=61.43 Aligned_cols=82 Identities=7% Similarity=-0.005 Sum_probs=59.5
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|+|+..... .+.+..++..+.+.+.|+.+++. .+..++++|+|..+|+++++..++....+.+..+.
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 96 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNID-DNPETPNAYQVRSIPTLMLVRDGKVIDKKVGALPK 96 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETT-TCCHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECC-CCHHHHHhcCCCccCEEEEEeCCEEEEEecCCCCH
Confidence 4567888888865432 46788889888877888666544 56889999999999999988433334456666677
Q ss_pred hhHHHHHH
Q 013319 403 KDQKSSIH 410 (445)
Q Consensus 403 ~~~~~~~~ 410 (445)
+++.+++.
T Consensus 97 ~~l~~~l~ 104 (107)
T 2i4a_A 97 SQLKAWVE 104 (107)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766554
No 270
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.01 E-value=5.2e-06 Score=69.77 Aligned_cols=106 Identities=15% Similarity=0.093 Sum_probs=70.8
Q ss_pred ceeccccccchhhhccCCCCEEEEEecCCC-----ChHHHHHHHHHhhc-cceEEEEeecCCChHHHHHcCCC------C
Q 013319 313 SKRISLNRIEFTFDAKARLPSVLLLSTKKE-----TPIIWRVLSGMYHE-RLNFYDTEVHDVSDPAVKKLGVD------A 380 (445)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~-~~~f~~~~v~~~~~~l~~~f~V~------~ 380 (445)
+..++.++++........++++|.|+..+. ..+.+.+++..+.+ .+.|+.+++. .+++++++|+|. .
T Consensus 9 v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~-~~~~~~~~~~v~~~~~~~~ 87 (137)
T 2dj0_A 9 IKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVG-RYTDVSTRYKVSTSPLTKQ 87 (137)
T ss_dssp CEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTT-TCHHHHHHTTCCCCSSSSC
T ss_pred EEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc-cCHHHHHHccCcccCCcCC
Confidence 334444444433444455688999976543 36889999999985 6788655443 678899999999 9
Q ss_pred CCeEEEEccCCcccccccccChhhHHHHHHHHHhhhhhh
Q 013319 381 LPAIVGWLSNGEKDVLKTGISVKDQKSSIHELSKLLDGL 419 (445)
Q Consensus 381 ~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 419 (445)
+||+++|..++....+.+..+.+++..++......+..|
T Consensus 88 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 126 (137)
T 2dj0_A 88 LPTLILFQGGKEAMRRPQIDKKGRAVSWTFSEENVIREF 126 (137)
T ss_dssp SSEEEEESSSSEEEEESCBCSSSCBCCCCCCHHHHHHHH
T ss_pred CCEEEEEECCEEEEEecCcCchHHHHHHHhcccchhhee
Confidence 999998865555555666666666655555555554444
No 271
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.01 E-value=4.1e-05 Score=60.41 Aligned_cols=83 Identities=10% Similarity=0.201 Sum_probs=60.0
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|+|+..... .+.+..++..+.+++.|+.+++. .++.++++|+|..+||++++..++....+.+..+.
T Consensus 16 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~ 94 (105)
T 1fb6_A 16 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTD-EAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPK 94 (105)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEEECCCH
T ss_pred cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCc-chHHHHHhCCCCcccEEEEEeCCeEEEEEecCCCH
Confidence 3467888888875432 46788888889888888666544 56889999999999999988544444456666666
Q ss_pred hhHHHHHHH
Q 013319 403 KDQKSSIHE 411 (445)
Q Consensus 403 ~~~~~~~~~ 411 (445)
+++..++..
T Consensus 95 ~~l~~~l~~ 103 (105)
T 1fb6_A 95 STLTDSIEK 103 (105)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 677665553
No 272
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.01 E-value=3.6e-05 Score=63.77 Aligned_cols=84 Identities=11% Similarity=0.109 Sum_probs=62.2
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhh----ccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCccccccc
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYH----ERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKT 398 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~----~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~ 398 (445)
..+++++|.|+.... ..+.+..++..+. +.+.|+.+++. .+..++++|+|..+||+++|..++....+.+
T Consensus 23 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~G 101 (133)
T 1x5d_A 23 DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDAT-VNQVLASRYGIRGFPTIKIFQKGESPVDYDG 101 (133)
T ss_dssp TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETT-TCCHHHHHHTCCSSSEEEEEETTEEEEEECS
T ss_pred cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECC-CCHHHHHhCCCCeeCeEEEEeCCCceEEecC
Confidence 346788888887653 2577889999887 67778665543 5688999999999999998887555556777
Q ss_pred ccChhhHHHHHHHH
Q 013319 399 GISVKDQKSSIHEL 412 (445)
Q Consensus 399 ~~~~~~~~~~~~~~ 412 (445)
..+.+++..++..+
T Consensus 102 ~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 102 GRTRSDIVSRALDL 115 (133)
T ss_dssp CCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 77777776555544
No 273
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.01 E-value=3.9e-05 Score=64.28 Aligned_cols=83 Identities=8% Similarity=0.093 Sum_probs=60.3
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhcc---ceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccc
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHER---LNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTG 399 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~---~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~ 399 (445)
..+++++|.|+..+. ..+.+..++..+.+. +.|+.+++. .+..++++|+|..+||+++| ++++...|.+.
T Consensus 32 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~-~~G~~~~~~g~ 109 (140)
T 2dj1_A 32 ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT-SASMLASKFDVSGYPTIKIL-KKGQAVDYDGS 109 (140)
T ss_dssp TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT-TCHHHHHHTTCCSSSEEEEE-ETTEEEECCSC
T ss_pred hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc-ccHHHHHHCCCCccCeEEEE-ECCcEEEcCCC
Confidence 446788888876543 367889999998875 777555433 56889999999999999988 44546667777
Q ss_pred cChhhHHHHHHHH
Q 013319 400 ISVKDQKSSIHEL 412 (445)
Q Consensus 400 ~~~~~~~~~~~~~ 412 (445)
.+.++|..++..+
T Consensus 110 ~~~~~l~~~l~~~ 122 (140)
T 2dj1_A 110 RTQEEIVAKVREV 122 (140)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 7776665555433
No 274
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.00 E-value=1.1e-05 Score=69.26 Aligned_cols=84 Identities=4% Similarity=-0.016 Sum_probs=65.6
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcc--c------
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEK--D------ 394 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~--~------ 394 (445)
..+++++|.|+..+. ..+.+.++|.++.+++.|+.++++ ++++++++|+|...||+++|++++.. .
T Consensus 39 ~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVD-e~~e~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~ 117 (160)
T 2av4_A 39 EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDIT-EVPDFNTMYELYDPVSVMFFYRNKHMMIDLGTGNN 117 (160)
T ss_dssp CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETT-TCCTTTTTTTCCSSEEEEEEETTEEEEEECSSSCC
T ss_pred cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECC-CCHHHHHHcCCCCCCEEEEEECCEEEEEecCCCCc
Confidence 466789999987764 368899999999988999888776 67899999999999999988877664 3
Q ss_pred -ccccccC-hhhHHHHHHHH
Q 013319 395 -VLKTGIS-VKDQKSSIHEL 412 (445)
Q Consensus 395 -~~~~~~~-~~~~~~~~~~~ 412 (445)
.+.+..+ +++++..+..+
T Consensus 118 ~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 118 NKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp SCBCSCCCCHHHHHHHHHHH
T ss_pred CeEEeecCCHHHHHHHHHHH
Confidence 4556555 66675555443
No 275
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.00 E-value=3.8e-05 Score=60.97 Aligned_cols=83 Identities=10% Similarity=0.217 Sum_probs=60.4
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+..... .+.+..++..+.+++.|+.+++. .+++++++|+|..+||++++..++....+.+..+.
T Consensus 17 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 95 (107)
T 1dby_A 17 ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTD-ESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPK 95 (107)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT-TCHHHHHHHTCCSSCEEEEESSSSEEEEEESCCCH
T ss_pred cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECC-CCHHHHHHCCCCcCCEEEEEeCCEEEEEEeCCCCH
Confidence 4567888888875432 56788899989888888666544 57889999999999999988544444456666666
Q ss_pred hhHHHHHHH
Q 013319 403 KDQKSSIHE 411 (445)
Q Consensus 403 ~~~~~~~~~ 411 (445)
+++.+++..
T Consensus 96 ~~l~~~l~~ 104 (107)
T 1dby_A 96 ATIVQTVEK 104 (107)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666655553
No 276
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.99 E-value=1.2e-05 Score=73.79 Aligned_cols=86 Identities=14% Similarity=0.168 Sum_probs=65.0
Q ss_pred CCcEEEEEEEC-CCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc----------------------------hhhHh
Q 013319 216 KGMTWLLFFYS-PSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE----------------------------ASLCK 264 (445)
Q Consensus 216 ~~~~~lV~Fya-p~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~----------------------------~~lc~ 264 (445)
.++++||.||+ .||++|.. .|.+.++.++++. .+.|..|+++.. ..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 35689999996 99999999 9999999999986 599999998852 25678
Q ss_pred HhCCc------cCCCcEEEEeccCCCCCCCeee-ecCc----ccHHHHHHHHHh
Q 013319 265 ELGVH------RPRSPRIFAYSYKAGDKGSLVE-YNEH----LVAKNLKSFCRD 307 (445)
Q Consensus 265 ~~~I~------~~~~Pti~~f~~~~~~~g~~~~-y~g~----~~~~~l~~fi~~ 307 (445)
.|+|. .+ |+.+++. .+|+++. +.+. ...+++.+.+..
T Consensus 148 ~ygv~~~~~g~~~--P~~~lID----~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAF--RGLFIID----PNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBC--EEEEEEC----TTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCcc--ceEEEEC----CCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 89998 78 9999982 4565443 3343 235666666653
No 277
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.98 E-value=3e-05 Score=61.89 Aligned_cols=95 Identities=9% Similarity=0.084 Sum_probs=63.6
Q ss_pred ceeccccccchhhhccCCCCEEEEEecCCCC-----hHHHHHHHHHhhc---cceEEEEeecCCChHHHHHcCCCCCCeE
Q 013319 313 SKRISLNRIEFTFDAKARLPSVLLLSTKKET-----PIIWRVLSGMYHE---RLNFYDTEVHDVSDPAVKKLGVDALPAI 384 (445)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~---~~~f~~~~v~~~~~~l~~~f~V~~~Ptl 384 (445)
+..++.++++.... +++++|.|+..... .+.+..++..+.. .+.|+.+++. .+.+++++|+|+.+||+
T Consensus 7 v~~l~~~~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 7 VLALTENNFDDTIA---EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT-AERNICSKYSVRGYPTL 82 (111)
T ss_dssp SEECCTTTHHHHHH---SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT-TCHHHHHHTTCCSSSEE
T ss_pred ceEcChhhHHHHhc---CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc-ccHhHHHhcCCCcccEE
Confidence 33444444443332 56788888765432 4677788777652 4566555433 67899999999999999
Q ss_pred EEEccCCcccccccccChhhHHHHHHH
Q 013319 385 VGWLSNGEKDVLKTGISVKDQKSSIHE 411 (445)
Q Consensus 385 v~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (445)
+++..++....+.+..+.+++.+++..
T Consensus 83 ~~~~~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 83 LLFRGGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp EEEETTEEEEEECSCCSHHHHHHHHHH
T ss_pred EEEeCCcEEEeccCCcCHHHHHHHHHh
Confidence 988655555677777788777776654
No 278
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.98 E-value=9.5e-06 Score=67.03 Aligned_cols=82 Identities=12% Similarity=0.130 Sum_probs=53.6
Q ss_pred cCCCCEEEEEecCCCC-------------------hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEc
Q 013319 328 KARLPSVLLLSTKKET-------------------PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWL 388 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-------------------~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~ 388 (445)
..+++++|.|+..... .+.+..++..+.+++.|+.+++. .+.+++++|+|.++||++++.
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d-~~~~l~~~~~v~~~Pt~~~~~ 97 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNID-QNPGTAPKYGIRGIPTLLLFK 97 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETT-SCTTTGGGGTCCBSSEEEEEE
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECC-CCHHHHHHcCCCccCEEEEEE
Confidence 4567888888654322 57888999988877888666554 568899999999999999884
Q ss_pred cCCcccccccccChhhHHHHHH
Q 013319 389 SNGEKDVLKTGISVKDQKSSIH 410 (445)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~ 410 (445)
.++....+.+..+.+++.+++.
T Consensus 98 ~G~~~~~~~G~~~~~~l~~~l~ 119 (123)
T 1oaz_A 98 NGEVAATKVGALSKGQLKEFLD 119 (123)
T ss_dssp SSSEEEEEESCCCHHHHHHHHT
T ss_pred CCEEEEEEeCCCCHHHHHHHHH
Confidence 3444445666667766655543
No 279
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.98 E-value=2.2e-05 Score=63.38 Aligned_cols=78 Identities=12% Similarity=0.081 Sum_probs=57.4
Q ss_pred CCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCc-ccccccccCh
Q 013319 329 ARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGE-KDVLKTGISV 402 (445)
Q Consensus 329 ~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~-~~~~~~~~~~ 402 (445)
.+++++|.|+.... ..+.+.+++..+.+.+.|+.+++. .+.+++++|+|..+||++++ .+++ ...+.+..+.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~ 93 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVD-ENQETAGKYGVMSIPTLLVL-KDGEVVETSVGFKPK 93 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETT-TCCSHHHHTTCCSBSEEEEE-ETTEEEEEEESCCCH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECC-CCHHHHHHcCCCcccEEEEE-eCCEEEEEEeCCCCH
Confidence 56788888876543 257788999999888888666554 56789999999999999988 5554 4456666666
Q ss_pred hhHHHH
Q 013319 403 KDQKSS 408 (445)
Q Consensus 403 ~~~~~~ 408 (445)
+++.++
T Consensus 94 ~~l~~~ 99 (112)
T 2voc_A 94 EALQEL 99 (112)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555333
No 280
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.97 E-value=7.1e-05 Score=59.96 Aligned_cols=95 Identities=15% Similarity=0.153 Sum_probs=61.7
Q ss_pred ccccccchhhhccCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccC
Q 013319 316 ISLNRIEFTFDAKARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSN 390 (445)
Q Consensus 316 i~~~~~~~~~~~~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~ 390 (445)
++.+++........+++++|.|+..... .+.+..++..+.+ +.|+.+.+...+.+++++|+|.++||++++..+
T Consensus 10 l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G 88 (111)
T 2pu9_C 10 VNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPTFKILKEN 88 (111)
T ss_dssp ECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSBSSEEEEESSS
T ss_pred echHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHHHHHHcCCCeeeEEEEEeCC
Confidence 3444433333333567888888876532 4678888888874 778666655457899999999999998866544
Q ss_pred CcccccccccChhhHHHHHHHH
Q 013319 391 GEKDVLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~ 412 (445)
+....+.+. ..+++.+++..+
T Consensus 89 ~~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 89 SVVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp SEEEEEESS-CHHHHHHHHHHH
T ss_pred cEEEEEcCC-CHHHHHHHHHHh
Confidence 434444443 466666555543
No 281
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.97 E-value=3.3e-05 Score=61.03 Aligned_cols=81 Identities=14% Similarity=0.167 Sum_probs=59.2
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+..... .+.+..++..+.+ +.|+.+++. .+++++++|+|.++||++++..++....+.+. +.
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~-~~ 94 (105)
T 3m9j_A 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVD-DCQDVASESEVKSMPTFQFFKKGQKVGEFSGA-NK 94 (105)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETT-TCHHHHHHTTCCBSSEEEEEETTEEEEEEESS-CH
T ss_pred cCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhh-hhHHHHHHcCCCcCcEEEEEECCeEEEEEeCC-CH
Confidence 3577889988876542 4778889988876 777666544 67899999999999999988555445456555 67
Q ss_pred hhHHHHHHH
Q 013319 403 KDQKSSIHE 411 (445)
Q Consensus 403 ~~~~~~~~~ 411 (445)
+++.+++..
T Consensus 95 ~~l~~~l~~ 103 (105)
T 3m9j_A 95 EKLEATINE 103 (105)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777665553
No 282
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.96 E-value=2.4e-05 Score=62.07 Aligned_cols=82 Identities=11% Similarity=0.124 Sum_probs=58.6
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|+|+..... .+.+..++..+.+++.|+.+++. .+..++++|+|..+|+++++..++....+.+..+.
T Consensus 16 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~ 94 (109)
T 2yzu_A 16 GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVD-ENPKTAMRYRVMSIPTVILFKDGQPVEVLVGAQPK 94 (109)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECC-CCHhHHHhCCCCcCCEEEEEeCCcEeeeEeCCCCH
Confidence 3456888888865432 46788899999877888666544 57889999999999999988433334456666666
Q ss_pred hhHHHHHH
Q 013319 403 KDQKSSIH 410 (445)
Q Consensus 403 ~~~~~~~~ 410 (445)
+++..++.
T Consensus 95 ~~l~~~l~ 102 (109)
T 2yzu_A 95 RNYQAKIE 102 (109)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 283
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.95 E-value=1.6e-05 Score=68.62 Aligned_cols=86 Identities=16% Similarity=0.308 Sum_probs=63.3
Q ss_pred CcEEEEEEEC-CCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc---------------------hhhHhHhCCcc--
Q 013319 217 GMTWLLFFYS-PSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE---------------------ASLCKELGVHR-- 270 (445)
Q Consensus 217 ~~~~lV~Fya-p~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~---------------------~~lc~~~~I~~-- 270 (445)
++++||.||+ .||++|.. .|.+.++.++++. .+.+..|+++.. ..+++.|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 4478999998 99999999 9999999999975 588999998742 35677788876
Q ss_pred ----------CCCcEEEEeccCCCCCCCeee-ecCc---ccHHHHHHHHHhh
Q 013319 271 ----------PRSPRIFAYSYKAGDKGSLVE-YNEH---LVAKNLKSFCRDH 308 (445)
Q Consensus 271 ----------~~~Pti~~f~~~~~~~g~~~~-y~g~---~~~~~l~~fi~~~ 308 (445)
. |+.+++. .+|+++. +.+. ...++|.+.+.+.
T Consensus 115 ~~~~~~~~~~~--p~~~lid----~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 115 NMYGKQVLGIE--RSTFLLS----PEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EETTEEEEEEC--CEEEEEC----TTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccccCcc--eEEEEEC----CCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 7 9999982 4565543 4332 2345666666543
No 284
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.95 E-value=3.7e-05 Score=60.33 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=59.1
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|+|+..... .+.+..++..+.+ +.|+.+++. .+.+++++|+|..+|+++++..++....+.+..+.
T Consensus 14 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~ 91 (104)
T 2e0q_A 14 ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSD-ENPDIAARYGVMSLPTVIFFKDGEPVDEIIGAVPR 91 (104)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT-TCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCH
T ss_pred hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECC-CCHHHHHhCCccccCEEEEEECCeEhhhccCCCCH
Confidence 3456788888765432 4678888888877 778666544 57889999999999999988433334456666677
Q ss_pred hhHHHHHHHH
Q 013319 403 KDQKSSIHEL 412 (445)
Q Consensus 403 ~~~~~~~~~~ 412 (445)
+++..++..+
T Consensus 92 ~~l~~~l~~~ 101 (104)
T 2e0q_A 92 EEIEIRIKNL 101 (104)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7776666544
No 285
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.95 E-value=3.4e-05 Score=63.88 Aligned_cols=83 Identities=17% Similarity=0.157 Sum_probs=61.6
Q ss_pred ccCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccC
Q 013319 327 AKARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGIS 401 (445)
Q Consensus 327 ~~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~ 401 (445)
...+++++|.|+..... .+.+..++..+.+++.|+.+++. .+..++++|+|.++||++++..++....+.+..+
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~ 117 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLD-KNESLARKFSVKSLPTIILLKNKTMLARKDHFVS 117 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGG-GCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCC
T ss_pred HccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECC-CCHHHHHHcCCCCcCEEEEEECCEEEEEecCCCC
Confidence 34567888888876532 56789999999888888666654 6789999999999999998854444555666677
Q ss_pred hhhHHHHHH
Q 013319 402 VKDQKSSIH 410 (445)
Q Consensus 402 ~~~~~~~~~ 410 (445)
.+++.+++.
T Consensus 118 ~~~l~~~l~ 126 (128)
T 3ul3_B 118 SNDLIALIK 126 (128)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 777755543
No 286
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.93 E-value=1.8e-05 Score=64.46 Aligned_cols=80 Identities=6% Similarity=0.049 Sum_probs=57.8
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+..... .+.+..++..+.+.+.|+.+.+. .+.+++++|+|..+||++++..++....+.+..+.
T Consensus 28 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~G~~~~ 106 (121)
T 2i1u_A 28 SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD-TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGK 106 (121)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECC-CCHHHHHhcCCCcCCEEEEEECCEEEEEecCCCCH
Confidence 4567888888876532 56788999999877888666554 57899999999999999988644344456666666
Q ss_pred hhHHHH
Q 013319 403 KDQKSS 408 (445)
Q Consensus 403 ~~~~~~ 408 (445)
+++..+
T Consensus 107 ~~l~~~ 112 (121)
T 2i1u_A 107 AALLRE 112 (121)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555333
No 287
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.92 E-value=3.9e-05 Score=71.44 Aligned_cols=98 Identities=16% Similarity=0.139 Sum_probs=69.5
Q ss_pred ceeccccccchhhhccCCCCEEEEEe---cCCCChHHHHHHHHHhhc---cceEEEEeecC--C--ChHHHHHcCCC--C
Q 013319 313 SKRISLNRIEFTFDAKARLPSVLLLS---TKKETPIIWRVLSGMYHE---RLNFYDTEVHD--V--SDPAVKKLGVD--A 380 (445)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~vvlF~---~~~~~~~~~~~lA~~~~~---~~~f~~~~v~~--~--~~~l~~~f~V~--~ 380 (445)
+..++..+++. ......+++|.|+ +.+...+.|..+|..+.+ .+.|+.+++.. . ++++|++|+|. +
T Consensus 18 v~~Lt~~nF~~--vi~~~~~vlV~Fy~~ApWCgl~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~ 95 (248)
T 2c0g_A 18 CVDLDELSFEK--TVERFPYSVVKFDIASPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKN 95 (248)
T ss_dssp CEECCTTTHHH--HHTTSSEEEEEEEESSCCSHHHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTS
T ss_pred cEECCHHHHHH--HHhcCCCEEEEEECCCCCCccHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCC
Confidence 33344444433 2345567888888 334468999999999954 67776655443 1 78999999999 9
Q ss_pred CCeEEEEccCC--ccccc--ccccChhhHHHHHHHHH
Q 013319 381 LPAIVGWLSNG--EKDVL--KTGISVKDQKSSIHELS 413 (445)
Q Consensus 381 ~Ptlv~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~ 413 (445)
+|||++|. +. ....| .++++.++|+.++....
T Consensus 96 ~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 96 FPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp CCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 99999998 54 24567 78888888888887653
No 288
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.92 E-value=2.3e-05 Score=73.25 Aligned_cols=99 Identities=6% Similarity=0.027 Sum_probs=70.4
Q ss_pred CCEEE-EEecCCC-ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccC-------Cccccc-cccc
Q 013319 331 LPSVL-LLSTKKE-TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSN-------GEKDVL-KTGI 400 (445)
Q Consensus 331 ~~~vv-lF~~~~~-~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~-------~~~~~~-~~~~ 400 (445)
.+++| +|.+... ....|.++|..+++.+.|+.+ .+++++++|+++. |+|++|+++ +....| .+..
T Consensus 25 ~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~----~~~~v~~~~~~~~-p~i~~fk~~~~~~kf~e~~~~y~~g~~ 99 (252)
T 2h8l_A 25 DASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHT----NVESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKM 99 (252)
T ss_dssp SCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEE----CCHHHHHHHCSSS-EEEEEECCGGGCCTTSCSEEECCCSSC
T ss_pred CeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEE----ChHHHHHHhCCCC-CcEEEEcchhhcccccccccccCCCCc
Confidence 34455 4544322 357899999999999999766 4688999999997 999999863 345567 6666
Q ss_pred ChhhHHHHHHHHHhhhhhhhhcccccccCCCccchhccccccccC
Q 013319 401 SVKDQKSSIHELSKLLDGLKKRTKRQLPHGLANHIVIQRRSRYLC 445 (445)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~l~~~~~~~~~~~~~~ 445 (445)
+.++| ..|++.|..++++.++..+..+.-.++||
T Consensus 100 ~~~~l-----------~~fi~~~~~Plv~e~t~~n~~~~~~~~~~ 133 (252)
T 2h8l_A 100 TSGKI-----------KKFIQENIFGICPHMTEDNKDLIQGKDLL 133 (252)
T ss_dssp CHHHH-----------HHHHHHHSSCSSCEECTTTHHHHSSSSEE
T ss_pred CHHHH-----------HHHHHhcccCCeeecccccHhhhcCCCeE
Confidence 66444 55666777788888888776654444443
No 289
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.91 E-value=9.5e-06 Score=60.27 Aligned_cols=67 Identities=10% Similarity=0.275 Sum_probs=50.0
Q ss_pred EEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHh---HhCCccCCCcEEEEeccCCCCCCCeeeecCcc
Q 013319 221 LLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCK---ELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHL 296 (445)
Q Consensus 221 lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~---~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~ 296 (445)
++.|+++||++|+. .+.++++ .+.+..+|++.++.+.+ ++++..+ |++++ +|.. ..| .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~v--P~l~~-------~g~~--~~g-~ 64 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQA--PVVEV-------DGEH--WSG-F 64 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCC--CEEEE-------TTEE--EES-C
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCcc--CEEEE-------CCeE--EcC-C
Confidence 67899999999999 8877754 37788899998776655 7999999 99874 2322 223 4
Q ss_pred cHHHHHHHH
Q 013319 297 VAKNLKSFC 305 (445)
Q Consensus 297 ~~~~l~~fi 305 (445)
+.+.|.+++
T Consensus 65 ~~~~l~~~l 73 (75)
T 1r7h_A 65 RPERIKQLQ 73 (75)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 667787776
No 290
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.90 E-value=4.2e-05 Score=60.46 Aligned_cols=80 Identities=11% Similarity=0.073 Sum_probs=57.2
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+.+.+.|+.+++. .+..++++|+|..+||++++..++....+.+ .+.+
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~ 96 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVD-ECEDIAMEYNISSMPTFVFLKNGVKVEEFAG-ANAK 96 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEES-CCHH
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEecc-chHHHHHHcCCCcccEEEEEcCCcEEEEEcC-CCHH
Confidence 567888888876532 46788899888777888666544 5688999999999999987754444444544 5666
Q ss_pred hHHHHHH
Q 013319 404 DQKSSIH 410 (445)
Q Consensus 404 ~~~~~~~ 410 (445)
++.+++.
T Consensus 97 ~l~~~i~ 103 (106)
T 1xwb_A 97 RLEDVIK 103 (106)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655544
No 291
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.90 E-value=6.1e-05 Score=71.45 Aligned_cols=98 Identities=9% Similarity=0.201 Sum_probs=70.0
Q ss_pred ceeccccccchhhhccCCCCEEEEEecCC-----CChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEE
Q 013319 313 SKRISLNRIEFTFDAKARLPSVLLLSTKK-----ETPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGW 387 (445)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~vvlF~~~~-----~~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~ 387 (445)
+..++.++++.......+++++|.|+..+ ...+.+..++..+.+++.|+.+++. .+++++++|+|.++||+++|
T Consensus 9 v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~ 87 (287)
T 3qou_A 9 IVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCD-AEQMIAAQFGLRAIPTVYLF 87 (287)
T ss_dssp EEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETT-TCHHHHHTTTCCSSSEEEEE
T ss_pred cEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCc-cCHHHHHHcCCCCCCeEEEE
Confidence 44445555544333344788999887654 2478999999999988888666554 67899999999999999988
Q ss_pred ccCCcccccccccChhhHHHHHHH
Q 013319 388 LSNGEKDVLKTGISVKDQKSSIHE 411 (445)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~ 411 (445)
..++....+.+..+.+.+..++..
T Consensus 88 ~~G~~~~~~~g~~~~~~l~~~l~~ 111 (287)
T 3qou_A 88 QNGQPVDGFQGPQPEEAIRALLDX 111 (287)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHH
T ss_pred ECCEEEEEeeCCCCHHHHHHHHHH
Confidence 544445557676777677666544
No 292
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.89 E-value=8.1e-05 Score=60.92 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=62.6
Q ss_pred ceeccccccchhhhccCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEE
Q 013319 313 SKRISLNRIEFTFDAKARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGW 387 (445)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~ 387 (445)
+..++.+++........+++++|.|+..+.. .+.+..++..+.+ +.|+.+++...+.+++++|+|+++||++++
T Consensus 20 v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~ 98 (124)
T 1faa_A 20 VTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPTFKIL 98 (124)
T ss_dssp EEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSSSSEEEEE
T ss_pred eEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHHHHHHcCCCeeeEEEEE
Confidence 3344444443333334677889988865532 4678888888864 777666655457899999999999998877
Q ss_pred ccCCcccccccccChhhHHHHHHH
Q 013319 388 LSNGEKDVLKTGISVKDQKSSIHE 411 (445)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~ 411 (445)
..++....+.+. ..+++.+++..
T Consensus 99 ~~G~~~~~~~G~-~~~~l~~~i~~ 121 (124)
T 1faa_A 99 KENSVVGEVTGA-KYDKLLEAIQA 121 (124)
T ss_dssp ETTEEEEEEESS-CHHHHHHHHHH
T ss_pred eCCcEEEEEcCC-CHHHHHHHHHH
Confidence 544433344443 46666555554
No 293
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.88 E-value=4.8e-05 Score=69.38 Aligned_cols=42 Identities=12% Similarity=0.153 Sum_probs=37.4
Q ss_pred CCcEEEEEEECCCCccCCChhHHHHHHHHhcC-ccEEEEEeCc
Q 013319 216 KGMTWLLFFYSPSSNRDGYESVIEEVANSMEG-ALKVGSINCE 257 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~~p~~~~~a~~l~~-~v~~~~Vdc~ 257 (445)
.++++||.|+|.||+.|+..|.++++.++++. .+.|..|+|+
T Consensus 55 ~GKvvll~FwAt~C~~c~e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGGGHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChHhHHHHHHHHHHhccCCeEEEEEEcc
Confidence 45689999999999999779999999999976 6999999986
No 294
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.88 E-value=8.2e-05 Score=59.18 Aligned_cols=81 Identities=12% Similarity=0.165 Sum_probs=56.8
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+..... .+.+.+++..+ +.+.|+.+++. .+.+++++|+|..+||++++..++....+.+ ...
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~ 95 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVH-QCQGTAATNNISATPTFQFFRNKVRIDQYQG-ADA 95 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETT-TSHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCH
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECc-cCHHHHHhcCCCcccEEEEEECCeEEEEEeC-CCH
Confidence 4677889988876542 46788888888 45788666554 5788999999999999998854444444544 445
Q ss_pred hhHHHHHHH
Q 013319 403 KDQKSSIHE 411 (445)
Q Consensus 403 ~~~~~~~~~ 411 (445)
+++.+++..
T Consensus 96 ~~l~~~l~~ 104 (107)
T 1gh2_A 96 VGLEEKIKQ 104 (107)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 456555543
No 295
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.86 E-value=7.2e-05 Score=67.66 Aligned_cols=84 Identities=10% Similarity=-0.001 Sum_probs=63.8
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+..+. ..+.|..++..+.+.+.|+.+++. .+..++++|+|..+||++++..++....+.+..+.
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 190 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCG-DDRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSK 190 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETT-TCHHHHHHTTCCSSSEEEEECTTSCCEECCSCCCH
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECC-ccHHHHHHcCCCcCCeEEEEECCCceeEecCCCCH
Confidence 456788998887653 257889999999888888666544 67899999999999999988555555667776777
Q ss_pred hhHHHHHHHH
Q 013319 403 KDQKSSIHEL 412 (445)
Q Consensus 403 ~~~~~~~~~~ 412 (445)
+++..++..+
T Consensus 191 ~~l~~~i~~~ 200 (210)
T 3apq_A 191 ESLVAFAMQH 200 (210)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7776666544
No 296
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.86 E-value=5e-05 Score=72.84 Aligned_cols=86 Identities=7% Similarity=0.024 Sum_probs=68.5
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecC-CChHHHHHcCCCCCCeEEEEccCC----------
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHD-VSDPAVKKLGVDALPAIVGWLSNG---------- 391 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~-~~~~l~~~f~V~~~Ptlv~~~~~~---------- 391 (445)
..+.+++|.|+..+. ..+.|..+|..+.+.+.|+.+.++. .+..+|++|+|.++||+++|..++
T Consensus 33 ~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~ 112 (298)
T 3ed3_A 33 NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNA 112 (298)
T ss_dssp SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC---------
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEEECCceeeccccccc
Confidence 456788898887654 2578999999998888887776654 578999999999999999888765
Q ss_pred -------cccccccccChhhHHHHHHHHH
Q 013319 392 -------EKDVLKTGISVKDQKSSIHELS 413 (445)
Q Consensus 392 -------~~~~~~~~~~~~~~~~~~~~~~ 413 (445)
....|.+.++.++|+.++....
T Consensus 113 ~~~~~~~~~~~y~G~r~~~~i~~fl~~~~ 141 (298)
T 3ed3_A 113 KKSFSAHANEVYSGARTLAPIVDFSLSRI 141 (298)
T ss_dssp ----CCCEEEECCSCCSHHHHHHHHHTTC
T ss_pred ccccccccceeecCCcCHHHHHHHHHHhc
Confidence 2567889999999988876543
No 297
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.86 E-value=5.1e-05 Score=60.73 Aligned_cols=81 Identities=17% Similarity=0.239 Sum_probs=58.0
Q ss_pred CCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhh
Q 013319 330 RLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKD 404 (445)
Q Consensus 330 ~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~ 404 (445)
+++++|.|+..... .+.+..++..+.+.+.|+.+++. .+..++++|+|..+||++++..++....+.+. +.++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~ 101 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVD-AVAAVAEAAGITAMPTFHVYKDGVKADDLVGA-SQDK 101 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT-TTHHHHHHHTCCBSSEEEEEETTEEEEEEESC-CHHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECC-chHHHHHHcCCCcccEEEEEECCeEEEEEcCC-CHHH
Confidence 67888888875532 46788899988877888666544 56899999999999999877533334445454 6666
Q ss_pred HHHHHHHH
Q 013319 405 QKSSIHEL 412 (445)
Q Consensus 405 ~~~~~~~~ 412 (445)
+.+++..+
T Consensus 102 l~~~l~~~ 109 (112)
T 1ep7_A 102 LKALVAKH 109 (112)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 298
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.86 E-value=3e-05 Score=61.65 Aligned_cols=81 Identities=11% Similarity=0.060 Sum_probs=50.4
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+.... ..+.+..++..+. .+.|+.+++. .+++++++|+|.++||++++..++....+.+..+.
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~ 93 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQ-DMQEIAGRYAVFTGPTVLLFYNGKEILRESRFISL 93 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEEC-CC---------CCCCEEEEEETTEEEEEEESSCCH
T ss_pred hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECC-CCHHHHHhcCCCCCCEEEEEeCCeEEEEEeCCcCH
Confidence 456788888877653 2577888888884 5777666654 66889999999999999988644444555666677
Q ss_pred hhHHHHHH
Q 013319 403 KDQKSSIH 410 (445)
Q Consensus 403 ~~~~~~~~ 410 (445)
+++.+++.
T Consensus 94 ~~l~~~l~ 101 (105)
T 4euy_A 94 ENLERTIQ 101 (105)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655544
No 299
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.85 E-value=1.8e-05 Score=73.53 Aligned_cols=85 Identities=16% Similarity=0.190 Sum_probs=62.1
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC---------------------------------------
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC--------------------------------------- 256 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc--------------------------------------- 256 (445)
..+.|+.|+.+||++|+. .+.++++.+. +.|.|..+..
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 347899999999999999 9998887764 4566654433
Q ss_pred -----------ccchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhC
Q 013319 257 -----------ETEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 257 -----------~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~l 309 (445)
+.+..+++++||+++ ||+++.. .+|......|..+.++|.+++.+.+
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gt--Pt~vi~~----~~G~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVT--PAIYYMS----KENTLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSS--CEEEEEE----TTTEEEEEESSCCHHHHHHHTTC--
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCC--CEEEEEC----CCCCEEEecCCCCHHHHHHHHHHHH
Confidence 123456789999999 9999972 2354445778888899998887544
No 300
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.85 E-value=7.5e-05 Score=62.72 Aligned_cols=79 Identities=11% Similarity=0.079 Sum_probs=57.9
Q ss_pred EEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhhHHH
Q 013319 333 SVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQKS 407 (445)
Q Consensus 333 ~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~ 407 (445)
++|.|+..... .+.+..++..+.+.+.|+.+++. .+..++++|+|..+||+++|..++....+.+..+.+++..
T Consensus 53 vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~ 131 (140)
T 1v98_A 53 TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVD-EHPGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEE 131 (140)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECC-CCHHHHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHH
Confidence 77777765432 56788999999877888666554 5789999999999999998854444445666667777766
Q ss_pred HHHHH
Q 013319 408 SIHEL 412 (445)
Q Consensus 408 ~~~~~ 412 (445)
++..+
T Consensus 132 ~i~~~ 136 (140)
T 1v98_A 132 RLRPY 136 (140)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 301
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.83 E-value=8e-05 Score=60.72 Aligned_cols=81 Identities=15% Similarity=0.196 Sum_probs=57.2
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+.+ +.|+.+++. .+.+++++|+|..+||++++..++....+.+.. .+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~ 109 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVD-ELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAI-KE 109 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEESSC-HH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECC-CCHHHHHHcCCCcccEEEEEeCCEEEEEEeCcC-HH
Confidence 567888888876532 4678888888876 778666544 578899999999999999875443344555555 66
Q ss_pred hHHHHHHHH
Q 013319 404 DQKSSIHEL 412 (445)
Q Consensus 404 ~~~~~~~~~ 412 (445)
++..++..+
T Consensus 110 ~l~~~l~~~ 118 (122)
T 2vlu_A 110 ELTAKVGLH 118 (122)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 665555443
No 302
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.82 E-value=7.6e-06 Score=65.37 Aligned_cols=54 Identities=13% Similarity=0.201 Sum_probs=41.5
Q ss_pred EEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc-------hhhHhHhCCccCCCcEEEE
Q 013319 220 WLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE-------ASLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 220 ~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~-------~~lc~~~~I~~~~~Pti~~ 278 (445)
.++.|+++||++|+. .+.+++++..+.. +..+|++.+ ..+.+.+++..+ |+|++
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~v--P~i~~ 74 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTV--PRVFI 74 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCS--CEEEE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCc--CeEEE
Confidence 367799999999999 9888876554422 666777765 257888999999 99854
No 303
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.82 E-value=0.00016 Score=57.97 Aligned_cols=85 Identities=12% Similarity=0.119 Sum_probs=56.5
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHh-hccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccC
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMY-HERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGIS 401 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~-~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~ 401 (445)
..+++++|.|+..... .+.+..++..+ ...+.|+.+++. .+.+++++|+|.++||++++..++....+.+ ..
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~ 96 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDAD-ENSEISELFEISAVPYFIIIHKGTILKELSG-AD 96 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEECS-CC
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecc-cCHHHHHHcCCCcccEEEEEECCEEEEEecC-CC
Confidence 3467888888766432 56788888875 245778666544 5788999999999999998853333344444 34
Q ss_pred hhhHHHHHHHHHh
Q 013319 402 VKDQKSSIHELSK 414 (445)
Q Consensus 402 ~~~~~~~~~~~~~ 414 (445)
.+++.+++..+..
T Consensus 97 ~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 97 PKEYVSLLEDCKN 109 (112)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5556666655443
No 304
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.81 E-value=9.8e-05 Score=60.39 Aligned_cols=82 Identities=13% Similarity=0.202 Sum_probs=57.5
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhcc-ceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccC
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHER-LNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGIS 401 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~-~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~ 401 (445)
..+++++|+|+..... .+.+..++..+.++ +.|+.+++. .+.+++++|+|..+||++++..++....+.+. +
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~ 108 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVD-EQSQIAQEVGIRAMPTFVFFKNGQKIDTVVGA-D 108 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETT-TCHHHHHHHTCCSSSEEEEEETTEEEEEEESS-C
T ss_pred cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECc-CCHHHHHHcCCCcccEEEEEECCeEEeeEcCC-C
Confidence 5567888888765432 46678888888765 777666544 56899999999999999988544444455554 6
Q ss_pred hhhHHHHHHH
Q 013319 402 VKDQKSSIHE 411 (445)
Q Consensus 402 ~~~~~~~~~~ 411 (445)
.+++.+++..
T Consensus 109 ~~~l~~~l~~ 118 (121)
T 2j23_A 109 PSKLQAAITQ 118 (121)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666655543
No 305
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.81 E-value=8.7e-05 Score=68.80 Aligned_cols=85 Identities=11% Similarity=0.067 Sum_probs=64.7
Q ss_pred cCCCCEEEEEec--C-CCChHHHHHHHHHhhc--cceEEEEeec---C-CChHHHHHcCCC--CCCeEEEEccCC--ccc
Q 013319 328 KARLPSVLLLST--K-KETPIIWRVLSGMYHE--RLNFYDTEVH---D-VSDPAVKKLGVD--ALPAIVGWLSNG--EKD 394 (445)
Q Consensus 328 ~~~~~~vvlF~~--~-~~~~~~~~~lA~~~~~--~~~f~~~~v~---~-~~~~l~~~f~V~--~~Ptlv~~~~~~--~~~ 394 (445)
....+++|.|+. . +...+.|..+|..+.+ .+.|+.+++. + .++++|++|+|+ ++|||++|..+. ...
T Consensus 20 ~~~~~vlV~FyA~~pWCgl~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~~~~~~ 99 (240)
T 2qc7_A 20 PKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPV 99 (240)
T ss_dssp GGCSEEEEEECCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTCSSCCE
T ss_pred cCCCCEEEEEeCCCCCCcchHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCCcCcce
Confidence 445678888875 3 3367899999999964 5677555543 2 378999999999 999999887755 356
Q ss_pred ccccccChhhHHHHHHHH
Q 013319 395 VLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~ 412 (445)
.|.+.++.++|+.++...
T Consensus 100 ~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 100 PYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp ECCSCSCHHHHHHHHHHT
T ss_pred eecCCCCHHHHHHHHHHh
Confidence 788888888888887765
No 306
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.81 E-value=6.5e-05 Score=65.89 Aligned_cols=69 Identities=17% Similarity=0.228 Sum_probs=52.5
Q ss_pred CcEEEEEEECCC-CccCCC-hhHHHHHHHHhcCccEEEEEeCcc----------------------chhhHhHhCCccCC
Q 013319 217 GMTWLLFFYSPS-SNRDGY-ESVIEEVANSMEGALKVGSINCET----------------------EASLCKELGVHRPR 272 (445)
Q Consensus 217 ~~~~lV~Fyap~-C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~----------------------~~~lc~~~~I~~~~ 272 (445)
++++||.||+.| |+.|+. .|.+.++.++ ..+.|..|+++. +..+++.|+|....
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 467999999999 999999 9999999988 568899998872 24577888886541
Q ss_pred -------CcEEEEeccCCCCCCCeee
Q 013319 273 -------SPRIFAYSYKAGDKGSLVE 291 (445)
Q Consensus 273 -------~Pti~~f~~~~~~~g~~~~ 291 (445)
.|+.+++ .++|+++.
T Consensus 122 ~~~~g~~~p~~~li----d~~G~I~~ 143 (175)
T 1xvq_A 122 GPMAGLLARAIVVI----GADGNVAY 143 (175)
T ss_dssp STTTTSBCSEEEEE----CTTSBEEE
T ss_pred cccCCcccceEEEE----CCCCeEEE
Confidence 2677776 24565544
No 307
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.80 E-value=0.00013 Score=57.32 Aligned_cols=80 Identities=16% Similarity=0.112 Sum_probs=55.9
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+. .+.|+.+++. .+++++++|+|..+||++++..++....+.+ .+.+
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G-~~~~ 94 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVD-QNEEAAAKYSVTAMPTFVFIKDGKEVDRFSG-ANET 94 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEecc-CCHHHHHHcCCccccEEEEEeCCcEEEEEeC-CCHH
Confidence 567888888765532 467788888876 5778666544 5688999999999999998764433344444 5666
Q ss_pred hHHHHHHH
Q 013319 404 DQKSSIHE 411 (445)
Q Consensus 404 ~~~~~~~~ 411 (445)
++.+++..
T Consensus 95 ~l~~~l~~ 102 (104)
T 2vim_A 95 KLRETITR 102 (104)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66555543
No 308
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.79 E-value=2.6e-05 Score=69.50 Aligned_cols=41 Identities=7% Similarity=0.002 Sum_probs=35.3
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC 256 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc 256 (445)
...+.||.|+++||++|+. .|.++++.+++...|.+..+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 4568999999999999999 9999999999877777776654
No 309
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.79 E-value=2.9e-05 Score=69.35 Aligned_cols=42 Identities=14% Similarity=0.199 Sum_probs=37.5
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE 257 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~ 257 (445)
.+++.||.|+++||++|+. .|.++++++++.+.+.+..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 4568999999999999999 99999999998877888888875
No 310
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.78 E-value=0.00011 Score=60.63 Aligned_cols=81 Identities=10% Similarity=0.030 Sum_probs=56.6
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+.... ..+.+..++..+. .+.|+.+++. .+.+++++|+|..+||++++..+.....+.+ .+.
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d-~~~~l~~~~~v~~~Pt~~i~~~G~~~~~~~G-~~~ 111 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDAD-NNSEIVSKCRVLQLPTFIIARSGKMLGHVIG-ANP 111 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCH
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECC-CCHHHHHHcCCCcccEEEEEeCCeEEEEEeC-CCH
Confidence 566788888886653 3567888988884 5788666554 5788999999999999998744433444544 556
Q ss_pred hhHHHHHHH
Q 013319 403 KDQKSSIHE 411 (445)
Q Consensus 403 ~~~~~~~~~ 411 (445)
+++.+++..
T Consensus 112 ~~l~~~l~~ 120 (125)
T 1r26_A 112 GMLRQKLRD 120 (125)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555554443
No 311
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.77 E-value=0.00018 Score=57.53 Aligned_cols=82 Identities=16% Similarity=0.150 Sum_probs=58.1
Q ss_pred ccCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccC
Q 013319 327 AKARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGIS 401 (445)
Q Consensus 327 ~~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~ 401 (445)
...+++++|.|+.... ..+.+..++..+.+ +.|+.+.+. .+..++++|+|..+||++++..++....+.+. +
T Consensus 21 ~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~ 97 (109)
T 3f3q_A 21 IAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVD-ELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGA-N 97 (109)
T ss_dssp TTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT-TCHHHHHHTTCCSSSEEEEEETTEEEEEEESS-C
T ss_pred HhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECC-CCHHHHHHcCCCccCEEEEEECCEEEEEEeCC-C
Confidence 3457788988887653 25678888888865 777666544 67899999999999999988744344444444 5
Q ss_pred hhhHHHHHHH
Q 013319 402 VKDQKSSIHE 411 (445)
Q Consensus 402 ~~~~~~~~~~ 411 (445)
.+++++++..
T Consensus 98 ~~~l~~~i~~ 107 (109)
T 3f3q_A 98 PAAIKQAIAA 107 (109)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6677666554
No 312
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.77 E-value=9.5e-05 Score=66.96 Aligned_cols=41 Identities=10% Similarity=0.100 Sum_probs=36.7
Q ss_pred CCcEEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCc
Q 013319 216 KGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCE 257 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~ 257 (445)
.++++||.|++.||+.| . .|.+.++.+++++ .+.|..|+|+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 35689999999999999 7 9999999999976 6999999986
No 313
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.74 E-value=0.00014 Score=59.63 Aligned_cols=76 Identities=16% Similarity=0.141 Sum_probs=54.9
Q ss_pred EEEEEecCCC-----ChHHHHHHHHHhhc-cceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhhHH
Q 013319 333 SVLLLSTKKE-----TPIIWRVLSGMYHE-RLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQK 406 (445)
Q Consensus 333 ~vvlF~~~~~-----~~~~~~~lA~~~~~-~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~ 406 (445)
++|.|+.... ..+.+..++..+.+ .+.|+.+++. .+..++++|+|..+||++++ ++++...+.+..+.+++.
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~-~~G~~~~~~G~~~~~~l~ 102 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT-EQPGLSGRFIINALPTIYHC-KDGEFRRYQGPRTKKDFI 102 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT-TCHHHHHHTTCCSSSEEEEE-ETTEEEECCSCCCHHHHH
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc-CCHHHHHHcCCcccCEEEEE-eCCeEEEeecCCCHHHHH
Confidence 6777776543 25678888888875 6778666544 67889999999999999988 555555666666666665
Q ss_pred HHHH
Q 013319 407 SSIH 410 (445)
Q Consensus 407 ~~~~ 410 (445)
+++.
T Consensus 103 ~~l~ 106 (126)
T 1x5e_A 103 NFIS 106 (126)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 314
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.72 E-value=7.7e-05 Score=60.20 Aligned_cols=81 Identities=10% Similarity=0.092 Sum_probs=56.9
Q ss_pred CCCCEEEEEecCCC-----ChHHHHHHHHHhhc---cceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcc--ccccc
Q 013319 329 ARLPSVLLLSTKKE-----TPIIWRVLSGMYHE---RLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEK--DVLKT 398 (445)
Q Consensus 329 ~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~---~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~--~~~~~ 398 (445)
.+++++|+|+.... ..+.+..++..+.+ .+.|+.+... .+..++++|+|.++||++++..++.. ..+.+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g 101 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDAT-EESDLAQQYGVRGYPTIKFFRNGDTASPKEYTA 101 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETT-TCCSSHHHHTCCSSSEEEEEESSCSSSCEECCC
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCC-CCHHHHHHCCCCcccEEEEEeCCCcCCcccccC
Confidence 45678888875432 36788899988863 4666555433 45789999999999999988555443 56767
Q ss_pred ccChhhHHHHHH
Q 013319 399 GISVKDQKSSIH 410 (445)
Q Consensus 399 ~~~~~~~~~~~~ 410 (445)
..+.+++.+++.
T Consensus 102 ~~~~~~l~~~l~ 113 (120)
T 1mek_A 102 GREADDIVNWLK 113 (120)
T ss_dssp CSSHHHHHHHHH
T ss_pred ccCHHHHHHHHH
Confidence 677766655544
No 315
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.71 E-value=1.8e-05 Score=59.87 Aligned_cols=69 Identities=9% Similarity=0.116 Sum_probs=48.8
Q ss_pred EEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHh---HhCCccCCCcEEEEeccCCCCCCCeeeecCcc
Q 013319 221 LLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCK---ELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHL 296 (445)
Q Consensus 221 lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~---~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~ 296 (445)
++.|+++||++|+. .+.+++. .+.+..||+++++.+.+ ++++..+ |++++ +|+.+ +..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~v--P~~~~-------~g~~~---~g~ 64 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQL--PVVIA-------GDLSW---SGF 64 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSS--CEEEE-------TTEEE---ESC
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCcc--CEEEE-------CCEEE---ecC
Confidence 67899999999999 8887753 46788899998765544 5899999 99843 23322 223
Q ss_pred cHHHHHHHHHh
Q 013319 297 VAKNLKSFCRD 307 (445)
Q Consensus 297 ~~~~l~~fi~~ 307 (445)
+.++|.+++.+
T Consensus 65 ~~~~l~~~l~~ 75 (81)
T 1h75_A 65 RPDMINRLHPA 75 (81)
T ss_dssp CHHHHGGGSCC
T ss_pred CHHHHHHHHhc
Confidence 56666665543
No 316
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.70 E-value=3.1e-05 Score=66.84 Aligned_cols=42 Identities=14% Similarity=0.153 Sum_probs=31.4
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET 258 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~ 258 (445)
+++++|.|| +.||+.|.. .|.+.++.++++. .+.+..|+.+.
T Consensus 30 Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~ 74 (157)
T 4g2e_A 30 GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDP 74 (157)
T ss_dssp TSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSC
T ss_pred CCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccc
Confidence 467889998 999999999 9999999888876 68888888775
No 317
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.70 E-value=8e-05 Score=68.17 Aligned_cols=86 Identities=10% Similarity=0.065 Sum_probs=62.6
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc----------------------------hhhHhH
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE----------------------------ASLCKE 265 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~----------------------------~~lc~~ 265 (445)
++++||.|| +.||+.|.. .|.+.++.++++. .+.|..|+++.. ..+++.
T Consensus 56 Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 135 (221)
T 2c0d_A 56 QKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKN 135 (221)
T ss_dssp TCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHHH
Confidence 468999999 999999999 9999999999864 688888887652 134566
Q ss_pred hCCc-----cCCCcEEEEeccCCCCCCCeee-ecC----cccHHHHHHHHHhh
Q 013319 266 LGVH-----RPRSPRIFAYSYKAGDKGSLVE-YNE----HLVAKNLKSFCRDH 308 (445)
Q Consensus 266 ~~I~-----~~~~Pti~~f~~~~~~~g~~~~-y~g----~~~~~~l~~fi~~~ 308 (445)
|+|. .. |+.+++. ++|.++. +.| ..+.++|.+.|...
T Consensus 136 ygv~~~~g~~~--P~~~lID----~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 136 YNVLYDNSFAL--RGLFIID----KNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp TTCEETTTEEC--EEEEEEC----TTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred cCCcccCCCcc--ceEEEEC----CCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 7773 56 9988882 4565443 333 24567787777654
No 318
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.70 E-value=0.00011 Score=62.85 Aligned_cols=85 Identities=13% Similarity=0.077 Sum_probs=63.5
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcc---------
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEK--------- 393 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~--------- 393 (445)
..+++++|.|+..+.. .+.+..++..+.+++.|+.+++. .+++++++|+|..+||++++..++..
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d-~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~ 99 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVD-QTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDH 99 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETT-TCCHHHHHTTCCSSSEEEEEETTEEEEEECSSSCC
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECC-cCHHHHHHcCCCccCeEEEEECCeEEEeecCCCCC
Confidence 4567889988876542 57888999999888888766654 67899999999999999966655545
Q ss_pred ccccc-ccChhhHHHHHHHHH
Q 013319 394 DVLKT-GISVKDQKSSIHELS 413 (445)
Q Consensus 394 ~~~~~-~~~~~~~~~~~~~~~ 413 (445)
..+.+ ..+.+++..++..+.
T Consensus 100 ~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 100 TKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp SCEESCCSSHHHHHHHHHHHH
T ss_pred CeEeeecCCHHHHHHHHHHHH
Confidence 45656 566677766666553
No 319
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.68 E-value=0.00018 Score=58.24 Aligned_cols=79 Identities=14% Similarity=0.178 Sum_probs=54.4
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+ .+.|+.+++. .+.+++++|+|.++||++++..++....+.+ .+.+
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~ 107 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVD-KLEETARKYNISAMPTFIAIKNGEKVGDVVG-ASIA 107 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETT-TSHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECC-ccHHHHHHcCCCccceEEEEeCCcEEEEEeC-CCHH
Confidence 567888888876532 46677887777 5777655543 5688999999999999998754433444444 5666
Q ss_pred hHHHHHHH
Q 013319 404 DQKSSIHE 411 (445)
Q Consensus 404 ~~~~~~~~ 411 (445)
++.+++..
T Consensus 108 ~l~~~l~~ 115 (117)
T 2xc2_A 108 KVEDMIKK 115 (117)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555543
No 320
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.67 E-value=0.00015 Score=66.15 Aligned_cols=85 Identities=12% Similarity=0.109 Sum_probs=63.8
Q ss_pred ccCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccC
Q 013319 327 AKARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGIS 401 (445)
Q Consensus 327 ~~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~ 401 (445)
...+++++|.|+..+.. .+.+..++..+.+++.|+.+.+. .+..++++|+|.++||++++..++....+.+..+
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~ 105 (222)
T 3dxb_A 27 LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID-QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALS 105 (222)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT-TCTTTGGGGTCCSBSEEEEEETTEEEEEEESCCC
T ss_pred HhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECC-CCHHHHHHcCCCcCCEEEEEECCeEEEEeccccC
Confidence 34577889988876542 57899999999988888666554 5688999999999999998865544556667677
Q ss_pred hhhHHHHHHHH
Q 013319 402 VKDQKSSIHEL 412 (445)
Q Consensus 402 ~~~~~~~~~~~ 412 (445)
.+++.+++..+
T Consensus 106 ~~~l~~~l~~~ 116 (222)
T 3dxb_A 106 KGQLKEFLDAN 116 (222)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHhh
Confidence 77776665543
No 321
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.66 E-value=0.00029 Score=57.79 Aligned_cols=82 Identities=15% Similarity=0.155 Sum_probs=58.5
Q ss_pred ccCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEe--ecCCChHHHHHcCCCCCCeEEEEccCCc-cccccc
Q 013319 327 AKARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTE--VHDVSDPAVKKLGVDALPAIVGWLSNGE-KDVLKT 398 (445)
Q Consensus 327 ~~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~--v~~~~~~l~~~f~V~~~Ptlv~~~~~~~-~~~~~~ 398 (445)
...+++++|.|+..... .+.+..++..+.+.+.|+.++ +. .+.+++++|+|..+||++++.++++ ...+.+
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d-~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G 101 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEE-KNIDLAYKYDANIVPTTVFLDKEGNKFYVHQG 101 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSS-HHHHHHHHTTCCSSSEEEEECTTCCEEEEEES
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCC-chHHHHHHcCCcceeEEEEECCCCCEEEEecC
Confidence 34567888888865432 467888888887778886665 33 5688999999999999998886655 344556
Q ss_pred ccChhhHHHHH
Q 013319 399 GISVKDQKSSI 409 (445)
Q Consensus 399 ~~~~~~~~~~~ 409 (445)
..+.+++.+++
T Consensus 102 ~~~~~~l~~~l 112 (126)
T 2l57_A 102 LMRKNNIETIL 112 (126)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 56665554443
No 322
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.65 E-value=5.6e-06 Score=74.58 Aligned_cols=43 Identities=19% Similarity=0.204 Sum_probs=39.4
Q ss_pred CcEEEEEEECCCCccCCC-hhHH---HHHHHHhcCccEEEEEeCccc
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVI---EEVANSMEGALKVGSINCETE 259 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~---~~~a~~l~~~v~~~~Vdc~~~ 259 (445)
..++||+||++||+||+. .|+| +++++++.+.|.|.+++++.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 457999999999999999 9999 999999988899999999865
No 323
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=6.8e-05 Score=62.59 Aligned_cols=63 Identities=16% Similarity=0.284 Sum_probs=44.7
Q ss_pred ChhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc---h----hhHhHhCCccCCCcEE
Q 013319 205 NLQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE---A----SLCKELGVHRPRSPRI 276 (445)
Q Consensus 205 t~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~---~----~lc~~~~I~~~~~Pti 276 (445)
..+.+.+.+. ... ++.|+++||++|+. .+.++++. +.+..||++.+ + .+++.+++..+ |+|
T Consensus 16 ~~~~~~~~i~-~~~--vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~v--P~l 84 (130)
T 2cq9_A 16 PVNQIQETIS-DNC--VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTV--PRI 84 (130)
T ss_dssp HHHHHHHHHH-HSS--EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCS--SEE
T ss_pred HHHHHHHHHc-CCc--EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCc--CEE
Confidence 3455655443 333 44599999999999 88888753 45566777765 3 37788999999 998
Q ss_pred EE
Q 013319 277 FA 278 (445)
Q Consensus 277 ~~ 278 (445)
++
T Consensus 85 ~i 86 (130)
T 2cq9_A 85 FV 86 (130)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 324
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.65 E-value=0.00012 Score=59.40 Aligned_cols=80 Identities=16% Similarity=0.059 Sum_probs=55.9
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+.... ..+.+..++..+.+ +.|+.+++. .+.+++++|+|..+||++++..++....+.+.. .
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~ 104 (114)
T 2oe3_A 28 KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVD-ESPDIAKECEVTAMPTFVLGKDGQLIGKIIGAN-P 104 (114)
T ss_dssp HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETT-TCHHHHHHTTCCSBSEEEEEETTEEEEEEESSC-H
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC-CCHHHHHHCCCCcccEEEEEeCCeEEEEEeCCC-H
Confidence 345678888876543 35678889888876 778666544 568899999999999999774443344455555 6
Q ss_pred hhHHHHHH
Q 013319 403 KDQKSSIH 410 (445)
Q Consensus 403 ~~~~~~~~ 410 (445)
+++.+++.
T Consensus 105 ~~l~~~l~ 112 (114)
T 2oe3_A 105 TALEKGIK 112 (114)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 56655443
No 325
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.65 E-value=0.00016 Score=59.86 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=58.2
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhh--ccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCccc--ccccc
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYH--ERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKD--VLKTG 399 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~--~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~--~~~~~ 399 (445)
.+++++|.|+..... .+.+..++..+. +.+.|+.+++. .+..++++|+|..+||++++..++... .|.++
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg 102 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT-ANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGG 102 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT-TSCCCCSSCCCSSSSEEEEECTTCTTSCEECCSS
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC-cCHHHHhhcCCCcCCEEEEEeCCCcccceEecCC
Confidence 467888888876543 467899999887 45666544332 557788899999999999887766433 35544
Q ss_pred -cChhhHHHHHHHH
Q 013319 400 -ISVKDQKSSIHEL 412 (445)
Q Consensus 400 -~~~~~~~~~~~~~ 412 (445)
.+.++++.++..+
T Consensus 103 ~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 103 NRDLEHLSKFIDEH 116 (133)
T ss_dssp CCSTTHHHHHHHHH
T ss_pred CcCHHHHHHHHHHh
Confidence 6667776665543
No 326
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.63 E-value=0.00013 Score=58.53 Aligned_cols=80 Identities=13% Similarity=0.141 Sum_probs=54.9
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|+|+..... .+.+..++..+. .+.|+.+++. .+..++++|+|..+||++++..++....+.+. +.
T Consensus 24 ~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~ 100 (112)
T 1syr_A 24 SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVD-EVSEVTEKENITSMPTFKVYKNGSSVDTLLGA-ND 100 (112)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT-TTHHHHHHTTCCSSSEEEEEETTEEEEEEESC-CH
T ss_pred ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECC-CCHHHHHHcCCCcccEEEEEECCcEEEEEeCC-CH
Confidence 3566788888765432 567788888876 4777666544 56889999999999999977544434445554 66
Q ss_pred hhHHHHHH
Q 013319 403 KDQKSSIH 410 (445)
Q Consensus 403 ~~~~~~~~ 410 (445)
+++.+++.
T Consensus 101 ~~l~~~l~ 108 (112)
T 1syr_A 101 SALKQLIE 108 (112)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 327
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.59 E-value=0.00014 Score=63.98 Aligned_cols=87 Identities=17% Similarity=0.235 Sum_probs=60.2
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc---------------------hhhHhHhCCccC-
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE---------------------ASLCKELGVHRP- 271 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~---------------------~~lc~~~~I~~~- 271 (445)
++++||.|| +.||+.|.. .|.+.++.++++. .+.+..|+++.. ..+++.|++...
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 457788887 999999999 9999999999986 688999988753 256677777531
Q ss_pred ---------CCcEEEEeccCCCCCCCeee-ecCc---ccHHHHHHHHHh
Q 013319 272 ---------RSPRIFAYSYKAGDKGSLVE-YNEH---LVAKNLKSFCRD 307 (445)
Q Consensus 272 ---------~~Pti~~f~~~~~~~g~~~~-y~g~---~~~~~l~~fi~~ 307 (445)
..|+.+++ .++|+++. +.+. ...++|.+.+.+
T Consensus 131 ~~~g~~~~~~~p~~~lI----D~~G~I~~~~~~~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 131 TMYGRQVIGIERSTFLI----GPTHRIVEAWRQVKVPGHAEEVLNKLKA 175 (179)
T ss_dssp CCC--CEEEECCEEEEE----CTTSBEEEEECSCCSTTHHHHHHHHHHH
T ss_pred cccCcccCCcceEEEEE----CCCCEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 02778887 24565443 3332 234566666554
No 328
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.57 E-value=5.4e-05 Score=65.83 Aligned_cols=88 Identities=13% Similarity=0.132 Sum_probs=60.3
Q ss_pred cCCcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc---------------------hhhHhHhCCc-
Q 013319 215 EKGMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE---------------------ASLCKELGVH- 269 (445)
Q Consensus 215 ~~~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~---------------------~~lc~~~~I~- 269 (445)
.++++++|.|| +.||++|.. .|.+.++.++++. .+.+..|+++.. ..+++.|||.
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~ 110 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYH 110 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEE
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCcc
Confidence 35667888888 999999999 9999999998876 688888988753 2456677763
Q ss_pred ---------cCCCcEEEEeccCCCCCCCeee-ec-----CcccHHHHHHHHHhh
Q 013319 270 ---------RPRSPRIFAYSYKAGDKGSLVE-YN-----EHLVAKNLKSFCRDH 308 (445)
Q Consensus 270 ---------~~~~Pti~~f~~~~~~~g~~~~-y~-----g~~~~~~l~~fi~~~ 308 (445)
.. |+.++. ..+|.+.. +. +..+.+++.+.+++.
T Consensus 111 ~~~~~~~~~~~--p~tflI----D~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 111 EDLKGLKMVAK--RAVFIV----KPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp EEETTEEEEEC--CEEEEE----CTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred cccccCcCCee--eEEEEE----CCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 24 777776 24554332 21 233566776666543
No 329
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.56 E-value=0.00039 Score=59.34 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=55.2
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..+.. .+.+..++..+. .+.|+.+++. .++.++++|+|..+||+++|. +++....-.|.+.+
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~-~G~~~~~~~G~~~~ 107 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAE-GVPEVSEKYEISSVPTFLFFK-NSQKIDRLDGAHAP 107 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT-TSHHHHHHTTCCSSSEEEEEE-TTEEEEEEESSCHH
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECC-CCHHHHHHcCCCCCCEEEEEE-CCEEEEEEeCCCHH
Confidence 367888888876532 567888888874 5778666544 578899999999999999888 55433222345555
Q ss_pred hHHHHHHH
Q 013319 404 DQKSSIHE 411 (445)
Q Consensus 404 ~~~~~~~~ 411 (445)
++..++..
T Consensus 108 ~l~~~i~~ 115 (153)
T 2wz9_A 108 ELTKKVQR 115 (153)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55444443
No 330
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.55 E-value=0.00042 Score=55.47 Aligned_cols=81 Identities=7% Similarity=0.119 Sum_probs=56.3
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|.|+..... .+.+..++..+. .+.|+.+++. .+.+++++|+|..+||+++|..++....+.+..+.
T Consensus 17 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~ 94 (110)
T 2l6c_A 17 EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSE-ARPELMKELGFERVPTLVFIRDGKVAKVFSGIMNP 94 (110)
T ss_dssp TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGG-GCHHHHHHTTCCSSCEEEEEESSSEEEEEESCCCH
T ss_pred HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCc-CCHHHHHHcCCcccCEEEEEECCEEEEEEcCCCCH
Confidence 3456788888765432 466777777765 5777666544 57889999999999999988444445556565677
Q ss_pred hhHHHHHH
Q 013319 403 KDQKSSIH 410 (445)
Q Consensus 403 ~~~~~~~~ 410 (445)
+++...+.
T Consensus 95 ~~l~~~~~ 102 (110)
T 2l6c_A 95 RELQALYA 102 (110)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655444
No 331
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.55 E-value=0.00035 Score=59.55 Aligned_cols=111 Identities=16% Similarity=0.223 Sum_probs=77.2
Q ss_pred CcccccChhhHHHHhhcCCcEEEEE-EECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC--ccchhhHhHhCCccCCCc
Q 013319 199 GNIRALNLQVFKKEIVEKGMTWLLF-FYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC--ETEASLCKELGVHRPRSP 274 (445)
Q Consensus 199 ~~V~~Lt~~~f~~~v~~~~~~~lV~-Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc--~~~~~lc~~~~I~~~~~P 274 (445)
.-|.++|.++... +..+.-+..+. |..+.-..-.. .+.++++|+++++.+.|+.||. +....+.+.+|+..-..|
T Consensus 14 PLV~e~t~en~~~-~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P 92 (147)
T 3bj5_A 14 PLVIEFTEQTAPK-IFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECP 92 (147)
T ss_dssp -CEEECCTTTHHH-HHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCS
T ss_pred CeeEEeccccHHH-HhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCC
Confidence 3488999999855 45655555444 44333333334 7899999999999999999999 566678899999862239
Q ss_pred EEEEeccCCCCCCCeeeec-CcccHHHHHHHHHhhCCCC
Q 013319 275 RIFAYSYKAGDKGSLVEYN-EHLVAKNLKSFCRDHLPRF 312 (445)
Q Consensus 275 ti~~f~~~~~~~g~~~~y~-g~~~~~~l~~fi~~~lp~~ 312 (445)
++.++... .++..+.+. +..+.+.|.+|+.+.+...
T Consensus 93 ~v~i~~~~--~~~~Ky~~~~~~~t~~~i~~Fv~d~l~Gk 129 (147)
T 3bj5_A 93 AVRLITLE--EEMTKYKPESEELTAERITEFCHRFLEGK 129 (147)
T ss_dssp EEEEEECS--SSCEEECCSCCCCCHHHHHHHHHHHHTTC
T ss_pred EEEEEecc--cccccCCCCcccCCHHHHHHHHHHHHcCC
Confidence 99998421 112223333 6788899999999877653
No 332
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.54 E-value=0.00013 Score=67.90 Aligned_cols=91 Identities=12% Similarity=0.015 Sum_probs=64.7
Q ss_pred CCEEEEEecC-C-CChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccC-------Cccccccc--c
Q 013319 331 LPSVLLLSTK-K-ETPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSN-------GEKDVLKT--G 399 (445)
Q Consensus 331 ~~~vvlF~~~-~-~~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~-------~~~~~~~~--~ 399 (445)
.+++|-|... . .....|.++|..+++.+.|+.+ .+++++++++|+. |+|++|+++ +....|.+ .
T Consensus 26 ~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t----~~~~v~~~~~v~~-p~ivlfk~~~~~~kfde~~~~y~g~~~ 100 (250)
T 3ec3_A 26 DVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHT----FSTEIAKFLKVSL-GKLVLMQPEKFQSKYEPRMHVMDVQGS 100 (250)
T ss_dssp SCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEE----CCHHHHHHHTCCS-SEEEEECCGGGCCTTSCSCEEEECCTT
T ss_pred CeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEE----CcHHHHHHcCCCC-CeEEEEecchhhccccccceeccCCCC
Confidence 4555555433 2 3478899999999999999765 5689999999997 999999863 34456763 4
Q ss_pred cChhhHHHHHHHHHhhhhhhhhcccccccCCCccchhc
Q 013319 400 ISVKDQKSSIHELSKLLDGLKKRTKRQLPHGLANHIVI 437 (445)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~l~~~~~~ 437 (445)
.+.++ |..|++.|...+++.++.++..
T Consensus 101 ~~~~~-----------l~~fi~~~~~Plv~e~t~~n~~ 127 (250)
T 3ec3_A 101 TEASA-----------IKDYVVKHALPLVGHRKTSNDA 127 (250)
T ss_dssp SCHHH-----------HHHHHHHHSSCTEEEECTTTHH
T ss_pred CCHHH-----------HHHHHHHcCCCceeecCccchh
Confidence 55544 4566667777777777776644
No 333
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.51 E-value=0.00048 Score=55.81 Aligned_cols=80 Identities=11% Similarity=0.142 Sum_probs=57.1
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhc-----cceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCc--ccc
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHE-----RLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGE--KDV 395 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~-----~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~--~~~ 395 (445)
..+++++|.|+..... .+.|.+++..+.+ .+.|+.+++. ...+++ +|..+||+++|..++. ...
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~--~v~~~Pt~~~~~~~~~~~~~~ 98 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT--ANDVPD--EIQGFPTIKLYPAGAKGQPVT 98 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT--TSCCSS--CCSSSSEEEEECSSCTTSCCC
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc--cccccc--ccCcCCeEEEEeCcCCCCceE
Confidence 4567888988876532 5778999999986 6777555443 223555 9999999999988765 556
Q ss_pred cccccChhhHHHHHHH
Q 013319 396 LKTGISVKDQKSSIHE 411 (445)
Q Consensus 396 ~~~~~~~~~~~~~~~~ 411 (445)
+.+..+.+++.+++..
T Consensus 99 ~~G~~~~~~l~~~i~~ 114 (121)
T 2djj_A 99 YSGSRTVEDLIKFIAE 114 (121)
T ss_dssp CCCCSCHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHh
Confidence 7777777777655543
No 334
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.51 E-value=0.00044 Score=61.45 Aligned_cols=40 Identities=8% Similarity=0.091 Sum_probs=33.6
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC 256 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc 256 (445)
..+.|++|+.+||++|.. .|.+.++.+++...|.+..+..
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 457899999999999999 9999999998876666665553
No 335
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.51 E-value=0.00017 Score=65.36 Aligned_cols=86 Identities=15% Similarity=0.190 Sum_probs=62.4
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc----------------------------hhhHhH
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE----------------------------ASLCKE 265 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~----------------------------~~lc~~ 265 (445)
++++||.|| +.||++|.. .|.+.++.++++. .+.|..|+++.. ..+++.
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 127 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 127 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHH
Confidence 468999999 999999999 9999999999975 688888887642 134556
Q ss_pred hCCc------cCCCcEEEEeccCCCCCCCeee-ecCc----ccHHHHHHHHHhh
Q 013319 266 LGVH------RPRSPRIFAYSYKAGDKGSLVE-YNEH----LVAKNLKSFCRDH 308 (445)
Q Consensus 266 ~~I~------~~~~Pti~~f~~~~~~~g~~~~-y~g~----~~~~~l~~fi~~~ 308 (445)
|+|. .. |+.+++. ++|++.. +.|. ++.++|.+.|...
T Consensus 128 ygv~~~~~g~~~--p~~~lID----~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 128 YGVYLEDSGHTL--RGLFIID----DKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp TTCEETTTTEEC--EEEEEEC----TTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred cCCcccCCCccc--ceEEEEC----CCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 7764 46 8888882 4565443 3332 3567777777654
No 336
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.51 E-value=0.00038 Score=57.20 Aligned_cols=80 Identities=10% Similarity=0.094 Sum_probs=54.6
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+. .+.|+.+++. .+.+++++|+|..+||++++..++....+.+ .+.+
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d-~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~ 113 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTD-ELKSVASDWAIQAMPTFMFLKEGKILDKVVG-AKKD 113 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETT-TSHHHHHHTTCCSSSEEEEEETTEEEEEEES-CCHH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECc-cCHHHHHHcCCCccCEEEEEECCEEEEEEeC-CCHH
Confidence 466788888875532 467888888876 5777665543 5789999999999999998743333334444 5666
Q ss_pred hHHHHHHH
Q 013319 404 DQKSSIHE 411 (445)
Q Consensus 404 ~~~~~~~~ 411 (445)
++.+++..
T Consensus 114 ~l~~~l~~ 121 (124)
T 1xfl_A 114 ELQSTIAK 121 (124)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555543
No 337
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.50 E-value=1.9e-05 Score=64.35 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=41.5
Q ss_pred EEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccch-------hhHhHhCCccCCCcEEEE
Q 013319 220 WLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEA-------SLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 220 ~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~-------~lc~~~~I~~~~~Pti~~ 278 (445)
.++.|+++||++|+. .+.+++++... +. +..||++.++ .+.+.+++..+ |++++
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~v--P~v~i 81 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR-GA--YEIVDIKEFKPENELRDYFEQITGGKTV--PRIFF 81 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT-TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSS--CEEEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc-Cc--eEEEEccCCCChHHHHHHHHHHhCCCCc--CEEEE
Confidence 578899999999999 88776543221 11 8889998774 68889999999 99854
No 338
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.49 E-value=0.00056 Score=55.57 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=54.8
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEcc----CCcccccccc
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLS----NGEKDVLKTG 399 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~----~~~~~~~~~~ 399 (445)
.+++++|.|+..+.. .+.+..++..+ +.+.|+.+++. .+.+++++|+|..+||+++|.. ++....+. |
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~-~~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~-G 98 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVD-KNGNAADAYGVSSIPALFFVKKEGNEIKTLDQFV-G 98 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETT-TCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEE-S
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECC-CCHHHHHhcCCCCCCEEEEEeCCCCcceEEEeec-C
Confidence 467888888876532 46678888888 67888666554 5789999999999999998876 22233343 3
Q ss_pred cChhhHHHHHHH
Q 013319 400 ISVKDQKSSIHE 411 (445)
Q Consensus 400 ~~~~~~~~~~~~ 411 (445)
...++|+..+..
T Consensus 99 ~~~~~l~~~~~~ 110 (118)
T 2f51_A 99 ADVSRIKADIEK 110 (118)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 344455544443
No 339
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.49 E-value=0.00019 Score=63.55 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=61.1
Q ss_pred CcEEEEEEEC-CCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc-------------------------hhhHhHhCC
Q 013319 217 GMTWLLFFYS-PSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE-------------------------ASLCKELGV 268 (445)
Q Consensus 217 ~~~~lV~Fya-p~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~-------------------------~~lc~~~~I 268 (445)
++++||.||+ .||+.|.. .|.+.++.++++. .+.+..|+++.. ..+++.|++
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 4688999995 99999999 9999999999875 688888887642 124455666
Q ss_pred c------cCCCcEEEEeccCCCCCCCeee-ecCcc----cHHHHHHHHHhh
Q 013319 269 H------RPRSPRIFAYSYKAGDKGSLVE-YNEHL----VAKNLKSFCRDH 308 (445)
Q Consensus 269 ~------~~~~Pti~~f~~~~~~~g~~~~-y~g~~----~~~~l~~fi~~~ 308 (445)
. .. |+.+++ .++|.+.. +.|.. +.++|.+.|...
T Consensus 110 ~~~~~g~~~--p~~~lI----D~~G~i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 110 MREDEGLAD--RATFVV----DPQGIIQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp EETTTTEEC--EEEEEE----CTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred ccCCCCcee--eEEEEE----CCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 5 24 888888 24565443 44432 467777777654
No 340
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.49 E-value=7.1e-05 Score=57.75 Aligned_cols=51 Identities=14% Similarity=0.316 Sum_probs=41.0
Q ss_pred EEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc--cchhhHhHh-CCccCCCcEEEE
Q 013319 220 WLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE--TEASLCKEL-GVHRPRSPRIFA 278 (445)
Q Consensus 220 ~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~--~~~~lc~~~-~I~~~~~Pti~~ 278 (445)
-++.|+++||++|+. .+.+++. .+.+..+|++ ....+.+.+ ++..+ |+|++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~------~i~~~~vdv~~~~~~~l~~~~~~~~~v--P~l~~ 61 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK------GVKYTDIDASTSLRQEMVQRANGRNTF--PQIFI 61 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH------TCCEEEECSCHHHHHHHHHHHHSSCCS--CEEEE
T ss_pred eEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCHHHHHHHHHHhCCCCCc--CEEEE
Confidence 367899999999999 8877764 2567788888 556788888 99999 99854
No 341
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.48 E-value=0.00036 Score=52.58 Aligned_cols=75 Identities=13% Similarity=0.141 Sum_probs=54.6
Q ss_pred CEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhhHH
Q 013319 332 PSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQK 406 (445)
Q Consensus 332 ~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~ 406 (445)
+.+++|+...- ..+.+..++..+.+.+.|+.+++. .+.+++++|+|.++||+++ +++. .+.+..+.+++.
T Consensus 4 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~---~G~~-~~~G~~~~~~l~ 78 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVM-ENPQKAMEYGIMAVPTIVI---NGDV-EFIGAPTKEALV 78 (85)
T ss_dssp EEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESS-SSCCTTTSTTTCCSSEEEE---TTEE-ECCSSSSSHHHH
T ss_pred eEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECC-CCHHHHHHCCCcccCEEEE---CCEE-eeecCCCHHHHH
Confidence 56777765432 367889999999877888666654 5678999999999999996 5554 566666677776
Q ss_pred HHHHH
Q 013319 407 SSIHE 411 (445)
Q Consensus 407 ~~~~~ 411 (445)
+++..
T Consensus 79 ~~l~~ 83 (85)
T 1fo5_A 79 EAIKK 83 (85)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 342
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.47 E-value=0.00011 Score=62.79 Aligned_cols=62 Identities=16% Similarity=0.305 Sum_probs=44.4
Q ss_pred hhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc---h----hhHhHhCCccCCCcEEE
Q 013319 206 LQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE---A----SLCKELGVHRPRSPRIF 277 (445)
Q Consensus 206 ~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~---~----~lc~~~~I~~~~~Pti~ 277 (445)
.+.+++.+.. .. ++.|+++||++|+. .+.++++. +.+..||++.+ + .+++.+++..+ |+|+
T Consensus 39 ~~~~~~~i~~-~~--Vvvf~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tv--P~if 107 (146)
T 2ht9_A 39 VNQIQETISD-NC--VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTV--PRIF 107 (146)
T ss_dssp HHHHHHHHHH-CS--EEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCS--CEEE
T ss_pred HHHHHHHhcC-CC--EEEEECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCc--CeEE
Confidence 4556555433 33 44499999999999 88888763 44566777765 3 37888999999 9985
Q ss_pred E
Q 013319 278 A 278 (445)
Q Consensus 278 ~ 278 (445)
+
T Consensus 108 i 108 (146)
T 2ht9_A 108 V 108 (146)
T ss_dssp E
T ss_pred E
Confidence 4
No 343
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.46 E-value=0.00092 Score=61.72 Aligned_cols=85 Identities=8% Similarity=0.130 Sum_probs=60.5
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhc---cceEEEEeecC-CChHHHHHcCCCCCCeEEEEccCCcc----c
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHE---RLNFYDTEVHD-VSDPAVKKLGVDALPAIVGWLSNGEK----D 394 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~---~~~f~~~~v~~-~~~~l~~~f~V~~~Ptlv~~~~~~~~----~ 394 (445)
..+++++|.|+..+. ..+.|..++..+.+ .+.|+.+++.. .+.+++++|+|..+||+++|..++.. .
T Consensus 28 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~ 107 (244)
T 3q6o_A 28 GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAV 107 (244)
T ss_dssp SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEE
T ss_pred hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCee
Confidence 345788888887654 36889999999987 67886666542 57899999999999999988874321 1
Q ss_pred ccccccChhhHHHHHHHH
Q 013319 395 VLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~ 412 (445)
+...+.+.++++.++...
T Consensus 108 ~~~~g~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 108 FPVAGADVQTLRERLIDA 125 (244)
T ss_dssp CCCTTCCHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHH
Confidence 233445666665555443
No 344
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.46 E-value=0.00025 Score=59.97 Aligned_cols=63 Identities=6% Similarity=-0.015 Sum_probs=49.5
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCc
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGE 392 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~ 392 (445)
.+++++|.|+..+.. .+.+.+++..+.+++.|+.+++. .+++++++|+|..+||+++|..++.
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d-~~~~~~~~~~i~~~Pt~~~~~~G~~ 89 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT-EVPDFNKMYELYDPCTVMFFFRNKH 89 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETT-TCCTTTTSSCSCSSCEEEEEETTEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccc-cCHHHHHHcCCCCCCEEEEEECCcE
Confidence 467888888876542 57889999999888888766655 5678999999999999998865443
No 345
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.44 E-value=0.00035 Score=60.86 Aligned_cols=88 Identities=8% Similarity=-0.018 Sum_probs=63.8
Q ss_pred CcEEEEEEECCCCcc-CCC-hhHHHHHHHHhc---CccEEEEEeCcc--c-----------------------------h
Q 013319 217 GMTWLLFFYSPSSNR-DGY-ESVIEEVANSME---GALKVGSINCET--E-----------------------------A 260 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~-C~~-~p~~~~~a~~l~---~~v~~~~Vdc~~--~-----------------------------~ 260 (445)
++++||.||+.||+. |.. .|.+.++.+++. ..+.+..|+++. . .
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 568999999999985 999 999999999995 358888888761 0 2
Q ss_pred hhHhHhCC---------ccCCCcEEEEeccCCCCCCCeee-ecCc-ccHHHHHHHHHhhCC
Q 013319 261 SLCKELGV---------HRPRSPRIFAYSYKAGDKGSLVE-YNEH-LVAKNLKSFCRDHLP 310 (445)
Q Consensus 261 ~lc~~~~I---------~~~~~Pti~~f~~~~~~~g~~~~-y~g~-~~~~~l~~fi~~~lp 310 (445)
.+++.||+ ... |+++++ .++|++.. |.|. .+.++|.+.|.+...
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~--~~~~lI----D~~G~i~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHP--NVVVVL----SPELQIKDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp HHHHHTTCCCEEETTEEECC--CEEEEE----CTTSBEEEEEESSSCCHHHHHHHHHHHTT
T ss_pred HHHHHCCeEEecCCCccccC--ceEEEE----CCCCeEEEEEeCCCCCHHHHHHHHHHhhc
Confidence 34555443 334 777777 35676654 5664 567889988887654
No 346
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.43 E-value=0.00055 Score=51.51 Aligned_cols=75 Identities=13% Similarity=0.181 Sum_probs=54.3
Q ss_pred CEEEEEecCC-----CChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhhHH
Q 013319 332 PSVLLLSTKK-----ETPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQK 406 (445)
Q Consensus 332 ~~vvlF~~~~-----~~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~ 406 (445)
+.+++|+... ...+.+..++..+.+.+.|+.+++. .+.+++++|+|.++||+++ +++. .+.+..+.+++.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~---~G~~-~~~G~~~~~~l~ 77 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIM-VDREKAIEYGLMAVPAIAI---NGVV-RFVGAPSREELF 77 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTT-TCGGGGGGTCSSCSSEEEE---TTTE-EEECSSCCHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECC-CCHHHHHhCCceeeCEEEE---CCEE-EEccCCCHHHHH
Confidence 4567776543 2367889999999888888666554 5678999999999999996 5554 566666677776
Q ss_pred HHHHH
Q 013319 407 SSIHE 411 (445)
Q Consensus 407 ~~~~~ 411 (445)
+++..
T Consensus 78 ~~l~~ 82 (85)
T 1nho_A 78 EAIND 82 (85)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65553
No 347
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.42 E-value=0.00036 Score=55.66 Aligned_cols=82 Identities=11% Similarity=0.119 Sum_probs=55.5
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+. .+.|+.+++. .+..++++|+|..+|+++++..++....+.+ .+.+
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~ 101 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVD-ELKAVAEEWNVEAMPTFIFLKDGKLVDKTVG-ADKD 101 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETT-TCHHHHHHHHCSSTTEEEEEETTEEEEEEEC-CCTT
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEcc-ccHHHHHhCCCCcccEEEEEeCCEEEEEEec-CCHH
Confidence 466788888775432 456778888776 5777655543 5688999999999999998843333333433 5667
Q ss_pred hHHHHHHHHH
Q 013319 404 DQKSSIHELS 413 (445)
Q Consensus 404 ~~~~~~~~~~ 413 (445)
++..++..+.
T Consensus 102 ~l~~~l~~~~ 111 (113)
T 1ti3_A 102 GLPTLVAKHA 111 (113)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 7766665543
No 348
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.42 E-value=0.00013 Score=68.04 Aligned_cols=84 Identities=6% Similarity=0.080 Sum_probs=63.2
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc---------------------------chhhHhHhCCc
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET---------------------------EASLCKELGVH 269 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~---------------------------~~~lc~~~~I~ 269 (445)
++|+.|+++||+.|.. .+.+.+++.+++. .+.+..|+++. ...+++.|+|.
T Consensus 36 vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~ 115 (249)
T 3a2v_A 36 FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115 (249)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCC
T ss_pred EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCc
Confidence 4556788999999999 9999999999975 69999999864 23578889987
Q ss_pred -------cCCCcEEEEeccCCCCCCCeee-ecCc----ccHHHHHHHHHhh
Q 013319 270 -------RPRSPRIFAYSYKAGDKGSLVE-YNEH----LVAKNLKSFCRDH 308 (445)
Q Consensus 270 -------~~~~Pti~~f~~~~~~~g~~~~-y~g~----~~~~~l~~fi~~~ 308 (445)
.+ |+++++. .+|.+.. +.+. ++.++|...|...
T Consensus 116 ~~~~g~~~~--p~~fIID----~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 116 HAESATHTV--RGVFIVD----ARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp CTTCSSSCC--EEEEEEC----TTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred cccCCCccc--ceEEEEC----CCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 77 9988882 4555433 2232 4678887777643
No 349
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.40 E-value=0.0005 Score=64.24 Aligned_cols=85 Identities=15% Similarity=0.186 Sum_probs=61.2
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc----------------------------hhhHhH
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE----------------------------ASLCKE 265 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~----------------------------~~lc~~ 265 (445)
++++||.|| +.||+.|.. .|.+.++.++++. .+.|..|+++.. ..+++.
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ 170 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 170 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHHH
Confidence 467888898 999999999 9999999999986 688999988753 245667
Q ss_pred hCCc------cCCCcEEEEeccCCCCCCCeee-ecC----cccHHHHHHHHHh
Q 013319 266 LGVH------RPRSPRIFAYSYKAGDKGSLVE-YNE----HLVAKNLKSFCRD 307 (445)
Q Consensus 266 ~~I~------~~~~Pti~~f~~~~~~~g~~~~-y~g----~~~~~~l~~fi~~ 307 (445)
|+|. .+ |+++++. .+|.+.. +.+ .++.+++.+.|..
T Consensus 171 ygv~~~~~g~~~--p~tflID----~~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 171 YGVYLEDSGHTL--RGLFIID----DKGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HTCEETTTTEEC--EEEEEEC----TTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred cCCccccCCCcc--ceEEEEC----CCCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 7775 46 8888882 4554433 222 3355666666653
No 350
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.38 E-value=0.0004 Score=56.90 Aligned_cols=61 Identities=16% Similarity=0.080 Sum_probs=48.0
Q ss_pred CCCCEEEEEecC-------CCC-----hHHHHHHHHHhhccceEEEEeec------CCChHHHHHcCCCCCCeEEEEcc
Q 013319 329 ARLPSVLLLSTK-------KET-----PIIWRVLSGMYHERLNFYDTEVH------DVSDPAVKKLGVDALPAIVGWLS 389 (445)
Q Consensus 329 ~~~~~vvlF~~~-------~~~-----~~~~~~lA~~~~~~~~f~~~~v~------~~~~~l~~~f~V~~~Ptlv~~~~ 389 (445)
.+++++|.|+.. ... .+.+..++..+.+.+.|+.+++. +.+..++++|+|.++||+++|..
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~ 101 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGT 101 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTS
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcC
Confidence 467888888876 432 56788888888778888877773 35678999999999999997765
No 351
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.38 E-value=0.00034 Score=60.02 Aligned_cols=54 Identities=17% Similarity=0.280 Sum_probs=44.3
Q ss_pred cEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc---------------------chhhHhHhCCccCCC
Q 013319 218 MTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET---------------------EASLCKELGVHRPRS 273 (445)
Q Consensus 218 ~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~---------------------~~~lc~~~~I~~~~~ 273 (445)
.++||.|| +.||+.|.. .|.+.++.++++. . .+..|+++. +..+++.|++...
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~-- 112 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKT-- 112 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSS--
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCccc--
Confidence 36788887 999999999 9999999999975 5 888888754 2357788999887
Q ss_pred c
Q 013319 274 P 274 (445)
Q Consensus 274 P 274 (445)
|
T Consensus 113 p 113 (159)
T 2a4v_A 113 P 113 (159)
T ss_dssp S
T ss_pred c
Confidence 8
No 352
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.38 E-value=0.00024 Score=61.75 Aligned_cols=42 Identities=10% Similarity=0.100 Sum_probs=36.5
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE 259 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~ 259 (445)
+++++|.|| +.||+.|.. .|.+.++.+++ ..+.+..|+++..
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~ 90 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLP 90 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCH
Confidence 457899998 899999999 99999999988 7788888888753
No 353
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.37 E-value=0.00064 Score=56.56 Aligned_cols=81 Identities=14% Similarity=0.107 Sum_probs=55.7
Q ss_pred CCCCEEEEEecCCCC-----hHHH---HHHHHHhhccceEEEEeecC---CChHHHHHcCCCCCCeEEEEccCCcc---c
Q 013319 329 ARLPSVLLLSTKKET-----PIIW---RVLSGMYHERLNFYDTEVHD---VSDPAVKKLGVDALPAIVGWLSNGEK---D 394 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~---~~lA~~~~~~~~f~~~~v~~---~~~~l~~~f~V~~~Ptlv~~~~~~~~---~ 394 (445)
.+++++|.|+..... .+.+ ..++..+.+ +.|+.+++.. .+..++++|+|..+|+++++..+++. .
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~ 108 (134)
T 2fwh_A 30 KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQA 108 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGG
T ss_pred cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeee
Confidence 367889988865432 2333 667777764 7776666532 34679999999999999988666654 3
Q ss_pred ccccccChhhHHHHHH
Q 013319 395 VLKTGISVKDQKSSIH 410 (445)
Q Consensus 395 ~~~~~~~~~~~~~~~~ 410 (445)
.+.+..+.+++.+++.
T Consensus 109 ~~~G~~~~~~l~~~l~ 124 (134)
T 2fwh_A 109 RVTGFMDAETFSAHLR 124 (134)
T ss_dssp CBCSCCCHHHHHHHHH
T ss_pred eeeeccCHHHHHHHHH
Confidence 5666677766655544
No 354
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.36 E-value=0.00039 Score=64.38 Aligned_cols=85 Identities=14% Similarity=0.203 Sum_probs=62.9
Q ss_pred CcEEEEEEEC-CCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc----------------------------hhhHhH
Q 013319 217 GMTWLLFFYS-PSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE----------------------------ASLCKE 265 (445)
Q Consensus 217 ~~~~lV~Fya-p~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~----------------------------~~lc~~ 265 (445)
++++||.||+ .||+.|.. .|.+.++.++++. .+.+..|+++.. ..+++.
T Consensus 77 Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 156 (240)
T 3qpm_A 77 GKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKD 156 (240)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHHH
Confidence 4688999999 99999999 9999999999986 688999988752 245677
Q ss_pred hCCc------cCCCcEEEEeccCCCCCCCeee-ecC----cccHHHHHHHHHh
Q 013319 266 LGVH------RPRSPRIFAYSYKAGDKGSLVE-YNE----HLVAKNLKSFCRD 307 (445)
Q Consensus 266 ~~I~------~~~~Pti~~f~~~~~~~g~~~~-y~g----~~~~~~l~~fi~~ 307 (445)
|++. .. |+.+++ ..+|.+.. +.+ .++.+++.+.|..
T Consensus 157 ygv~~~~~g~~~--p~~flI----D~~G~I~~~~~~~~~~~~~~~eil~~l~~ 203 (240)
T 3qpm_A 157 YGVYLEDQGHTL--RGLFII----DEKGVLRQITMNDLPVGRSVDETLRLVQA 203 (240)
T ss_dssp TTCEETTTTEEC--EEEEEE----CTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred hCCccccCCCcc--ceEEEE----cCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 8876 56 998888 24565433 222 3355677776654
No 355
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.33 E-value=0.0011 Score=53.25 Aligned_cols=81 Identities=11% Similarity=0.101 Sum_probs=55.3
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|.|+..... .+.+..++..+. .+.|+.+++. .+..++++|+|..+|+++++..++....+.+ .+.+
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~ 103 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVD-ELKDVAEAYNVEAMPTFLFIKDGEKVDSVVG-GRKD 103 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT-TSHHHHHHTTCCSBSEEEEEETTEEEEEEES-CCHH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcc-cCHHHHHHcCCCcCcEEEEEeCCeEEEEecC-CCHH
Confidence 366888888875432 467888888876 5777665544 5688999999999999998843333334444 5666
Q ss_pred hHHHHHHHH
Q 013319 404 DQKSSIHEL 412 (445)
Q Consensus 404 ~~~~~~~~~ 412 (445)
++..++..+
T Consensus 104 ~l~~~l~~~ 112 (118)
T 2vm1_A 104 DIHTKIVAL 112 (118)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 665555443
No 356
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.31 E-value=0.00019 Score=57.32 Aligned_cols=61 Identities=8% Similarity=0.155 Sum_probs=44.0
Q ss_pred hhHHHHhhcCCcEEEEEEEC-----CCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchh----hHhHhCCccCCCcEE
Q 013319 207 QVFKKEIVEKGMTWLLFFYS-----PSSNRDGY-ESVIEEVANSMEGALKVGSINCETEAS----LCKELGVHRPRSPRI 276 (445)
Q Consensus 207 ~~f~~~v~~~~~~~lV~Fya-----p~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~----lc~~~~I~~~~~Pti 276 (445)
+.+++.+ ..+. +|.|++ +||++|+. .+.++++ .+.+..+|+++++. +.+.+++..+ |+|
T Consensus 8 ~~~~~~i-~~~~--vvvf~~g~~~~~~C~~C~~~~~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~v--P~v 76 (105)
T 2yan_A 8 ERLKVLT-NKAS--VMLFMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKAYSNWPTY--PQL 76 (105)
T ss_dssp HHHHHHH-TSSS--EEEEESBCSSSBCTTHHHHHHHHHHHH------TCCCEEEEGGGCHHHHHHHHHHHTCCSS--CEE
T ss_pred HHHHHHh-ccCC--EEEEEecCCCCCCCccHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHHHCCCCC--CeE
Confidence 4455544 4443 445887 99999999 8877765 36788999988765 4556799999 998
Q ss_pred EE
Q 013319 277 FA 278 (445)
Q Consensus 277 ~~ 278 (445)
++
T Consensus 77 ~i 78 (105)
T 2yan_A 77 YV 78 (105)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 357
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.29 E-value=0.00098 Score=55.53 Aligned_cols=81 Identities=16% Similarity=0.108 Sum_probs=56.0
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCc-ccccccccCh
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGE-KDVLKTGISV 402 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~-~~~~~~~~~~ 402 (445)
.+++++|.|+..+.. .+.+..++..+. .+.|+.+++. .+.+++++|+|..+||++++ .+++ ...+.+. +.
T Consensus 45 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~-~~G~~~~~~~G~-~~ 120 (139)
T 3d22_A 45 DGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVD-ELSDFSASWEIKATPTFFFL-RDGQQVDKLVGA-NK 120 (139)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT-TSHHHHHHTTCCEESEEEEE-ETTEEEEEEESC-CH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCc-ccHHHHHHcCCCcccEEEEE-cCCeEEEEEeCC-CH
Confidence 467888888875432 467888888874 5777666554 67899999999999999988 5554 3344443 56
Q ss_pred hhHHHHHHHHH
Q 013319 403 KDQKSSIHELS 413 (445)
Q Consensus 403 ~~~~~~~~~~~ 413 (445)
+++..++..+.
T Consensus 121 ~~l~~~l~~~~ 131 (139)
T 3d22_A 121 PELHKKITAIL 131 (139)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 66655555443
No 358
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.26 E-value=0.00041 Score=60.03 Aligned_cols=41 Identities=15% Similarity=0.003 Sum_probs=33.7
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE 259 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~ 259 (445)
+++++|.|| +.||++|.. .|.+.++.++ ..+.+..|+++..
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~ 88 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLP 88 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCH
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCH
Confidence 457888888 789999999 9999998877 4578888887753
No 359
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.25 E-value=0.00064 Score=56.60 Aligned_cols=80 Identities=13% Similarity=0.179 Sum_probs=50.6
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEc-cCCc---cccccc
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWL-SNGE---KDVLKT 398 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~-~~~~---~~~~~~ 398 (445)
..+++++|.|+..+. ..+.+..++..+ .+.|+.+++. .+.+++++|+|..+||+++|. .+++ ...+.+
T Consensus 38 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~-~~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G 114 (133)
T 3cxg_A 38 TQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVD-IHPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEG 114 (133)
T ss_dssp -CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETT-TCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEES
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEecc-chHHHHHhcCCCCCCEEEEEEecCCCeEEEEEEcC
Confidence 345688888877653 245666666655 3566555433 678899999999999999885 2443 233433
Q ss_pred ccChhhHHHHHHH
Q 013319 399 GISVKDQKSSIHE 411 (445)
Q Consensus 399 ~~~~~~~~~~~~~ 411 (445)
.+.+++.+++..
T Consensus 115 -~~~~~l~~~l~~ 126 (133)
T 3cxg_A 115 -ANQNDIEKAFQK 126 (133)
T ss_dssp -CCHHHHHHHHHH
T ss_pred -CCHHHHHHHHHH
Confidence 356666555443
No 360
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.25 E-value=0.00048 Score=55.77 Aligned_cols=82 Identities=10% Similarity=0.108 Sum_probs=54.9
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecC---CChHHHHHcCCCCCCeEEEEccCCcccccccc
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHD---VSDPAVKKLGVDALPAIVGWLSNGEKDVLKTG 399 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~---~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~ 399 (445)
..+++++|.|+..+.. .+.+..++..+...+.++.+.... ....++++|+|.++||++++..++....+.+.
T Consensus 27 ~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G~~~~~~~G~ 106 (118)
T 1zma_A 27 DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSS 106 (118)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETTEEEEECCTT
T ss_pred hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECCEEEEEecCC
Confidence 3456888888876542 567888888877666664321111 12478899999999999988655445566666
Q ss_pred cChhhHHHHH
Q 013319 400 ISVKDQKSSI 409 (445)
Q Consensus 400 ~~~~~~~~~~ 409 (445)
.+.+++..++
T Consensus 107 ~~~~~l~~~l 116 (118)
T 1zma_A 107 MSAQEIKDFA 116 (118)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 6776665554
No 361
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.24 E-value=0.00053 Score=57.18 Aligned_cols=77 Identities=13% Similarity=0.002 Sum_probs=53.7
Q ss_pred CEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeec--------CCChHHHHHcCCCCCCeEEEEccCCccccccc
Q 013319 332 PSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVH--------DVSDPAVKKLGVDALPAIVGWLSNGEKDVLKT 398 (445)
Q Consensus 332 ~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~--------~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~ 398 (445)
+++|.|+..+.. .+.+..++..+. +.|+.+++. +.+.+++++|+|.++||++++..++....+.+
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G 110 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEGRIVDKLVG 110 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETTEEEEEEES
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCCEEEEEEeC
Confidence 788888766543 467888888776 777666662 14578999999999999998885444555656
Q ss_pred ccChhhHHHHHH
Q 013319 399 GISVKDQKSSIH 410 (445)
Q Consensus 399 ~~~~~~~~~~~~ 410 (445)
..+.+.+..+++
T Consensus 111 ~~~~~~~~~~i~ 122 (135)
T 3emx_A 111 ATPWSLKVEKAR 122 (135)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 556544443333
No 362
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.24 E-value=0.00034 Score=60.51 Aligned_cols=51 Identities=14% Similarity=0.152 Sum_probs=41.2
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchh---hHhHhCC
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEAS---LCKELGV 268 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~---lc~~~~I 268 (445)
++++||.|| +.||+.|.. .|.+.++.+++ ..+.+..|+++.... .++++++
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~ 98 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGI 98 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 457899998 899999999 99999999999 778999999875432 3445554
No 363
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=96.29 E-value=5.3e-05 Score=59.64 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=54.9
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
..+++++|+|+.... ..+.+..++..+.+.+.|+.+++. .+..++++|+|..+|+++++..++....+.+..+.
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~ 95 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVD-ENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPK 95 (106)
Confidence 445677888765432 356778888888877777555443 56789999999999999988434444445555555
Q ss_pred hhHHHHHH
Q 013319 403 KDQKSSIH 410 (445)
Q Consensus 403 ~~~~~~~~ 410 (445)
+++.+++.
T Consensus 96 ~~l~~~l~ 103 (106)
T 2yj7_A 96 EALKERID 103 (106)
Confidence 55544443
No 364
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.19 E-value=0.0016 Score=53.71 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=59.0
Q ss_pred cCCCCEEEEEecCCCC-----hHHHH--HHHHHhhccceEEEEeec--CCChHHHHHcCC---CCCCeEEEEccCCcc-c
Q 013319 328 KARLPSVLLLSTKKET-----PIIWR--VLSGMYHERLNFYDTEVH--DVSDPAVKKLGV---DALPAIVGWLSNGEK-D 394 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~--~lA~~~~~~~~f~~~~v~--~~~~~l~~~f~V---~~~Ptlv~~~~~~~~-~ 394 (445)
..+++++|.|+..... .+.+. .++..+.+.+.++.+.+. +.+.+++++|+| .++||++++..+++. .
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~ 106 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRY 106 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEE
Confidence 3467888888766532 45677 888888778888777662 267899999999 999999988665543 3
Q ss_pred cccc-------ccChhhHHHHHHHH
Q 013319 395 VLKT-------GISVKDQKSSIHEL 412 (445)
Q Consensus 395 ~~~~-------~~~~~~~~~~~~~~ 412 (445)
.+.+ ..+.+++..++..+
T Consensus 107 ~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 107 TTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp ECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EecCCcccccccCCHHHHHHHHHHh
Confidence 3333 23446666655544
No 365
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.18 E-value=0.00028 Score=54.62 Aligned_cols=68 Identities=10% Similarity=0.074 Sum_probs=47.8
Q ss_pred EEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc-----cc----hhhHhHhCCccCCCcEEEEeccCCCCCCCee
Q 013319 221 LLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE-----TE----ASLCKELGVHRPRSPRIFAYSYKAGDKGSLV 290 (445)
Q Consensus 221 lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~-----~~----~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~ 290 (445)
++.|+++||++|+. .+.++++. +.+-.+|++ +. .++.+.+++..+ |+|++ +|..
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~v--P~l~~-------~g~~- 77 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSV--PVVVK-------GDKH- 77 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCS--CEEEE-------TTEE-
T ss_pred EEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCc--CEEEE-------CCEE-
Confidence 67799999999999 77777653 334456666 33 566778899999 99887 2322
Q ss_pred eecCcccHHHHHHHHH
Q 013319 291 EYNEHLVAKNLKSFCR 306 (445)
Q Consensus 291 ~y~g~~~~~~l~~fi~ 306 (445)
.+..+.+.|.+++.
T Consensus 78 --i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 78 --VLGYNEEKLKELIR 91 (92)
T ss_dssp --EESCCHHHHHHHHH
T ss_pred --EeCCCHHHHHHHhc
Confidence 23347888888874
No 366
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.16 E-value=0.00098 Score=51.92 Aligned_cols=73 Identities=11% Similarity=0.096 Sum_probs=50.4
Q ss_pred EEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHh-----CCccCCCcEEEEeccCCCCCCCeeeec
Q 013319 220 WLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKEL-----GVHRPRSPRIFAYSYKAGDKGSLVEYN 293 (445)
Q Consensus 220 ~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~-----~I~~~~~Pti~~f~~~~~~~g~~~~y~ 293 (445)
-++.|..+||++|++ ...+++ ..+.+-.+|++++++..+.+ |.+.+ |+|++ .+|..+.
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~------~gi~y~~idi~~d~~~~~~~~~~~~G~~tV--P~I~i------~Dg~~l~-- 68 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA------NRIAYDEVDIEHNRAAAEFVGSVNGGNRTV--PTVKF------ADGSTLT-- 68 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH------TTCCCEEEETTTCHHHHHHHHHHSSSSSCS--CEEEE------TTSCEEE--
T ss_pred cEEEEcCCCCHhHHHHHHHHHh------cCCceEEEEcCCCHHHHHHHHHHcCCCCEe--CEEEE------eCCEEEe--
Confidence 478899999999998 544442 25778889998887554332 67788 99877 3454332
Q ss_pred CcccHHHHHHHHHhhC
Q 013319 294 EHLVAKNLKSFCRDHL 309 (445)
Q Consensus 294 g~~~~~~l~~fi~~~l 309 (445)
| .+.++|.+++.+..
T Consensus 69 ~-~~~~el~~~L~el~ 83 (92)
T 2lqo_A 69 N-PSADEVKAKLVKIA 83 (92)
T ss_dssp S-CCHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHhc
Confidence 2 36678888887643
No 367
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.15 E-value=0.0015 Score=53.90 Aligned_cols=75 Identities=11% Similarity=0.034 Sum_probs=54.7
Q ss_pred CCEEEEE-ecC-CCChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccC-Cccccccc----ccChh
Q 013319 331 LPSVLLL-STK-KETPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSN-GEKDVLKT----GISVK 403 (445)
Q Consensus 331 ~~~vvlF-~~~-~~~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~-~~~~~~~~----~~~~~ 403 (445)
.+.||-| .+. ......|.++|..+ +.+.|+.+ .+++++++++++ .|+|++|++. .....|.+ ..+.+
T Consensus 40 ~v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t----~~~~v~~~~~v~-~~~vvlfkkfde~~~~~~g~~~~~~~~~ 113 (124)
T 2l4c_A 40 EVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIS----TDSEVLTHYNIT-GNTICLFRLVDNEQLNLEDEDIESIDAT 113 (124)
T ss_dssp SEEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEE----CCHHHHHHTTCC-SSCEEEEETTTTEEEEECHHHHTTCCHH
T ss_pred CCEEEEEECCCCChhHHHHHHHHHhC-CCceEEEE----ChHHHHHHcCCC-CCeEEEEEcCCCCceeecCcccCCCCHH
Confidence 3445544 442 33478999999999 88999766 568999999999 7999999984 45566765 45777
Q ss_pred hHHHHHHH
Q 013319 404 DQKSSIHE 411 (445)
Q Consensus 404 ~~~~~~~~ 411 (445)
+|..|+..
T Consensus 114 ~L~~FI~~ 121 (124)
T 2l4c_A 114 KLSRFIEI 121 (124)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666653
No 368
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.11 E-value=0.00093 Score=58.22 Aligned_cols=40 Identities=10% Similarity=-0.108 Sum_probs=32.9
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHh--cCccEEEEEeC
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSM--EGALKVGSINC 256 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l--~~~v~~~~Vdc 256 (445)
..+.|+.|+.++|++|+. .|.+.++.+++ .+.|++..++.
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 457899999999999999 99999998888 66677665543
No 369
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.07 E-value=0.00035 Score=55.24 Aligned_cols=52 Identities=8% Similarity=0.108 Sum_probs=39.7
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHh-----CCccCCCcEEEE
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKEL-----GVHRPRSPRIFA 278 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~-----~I~~~~~Pti~~ 278 (445)
.-++.|++|||++|++ .+.+++. .+.+..+|++.++.+.+++ ++..+ |+|++
T Consensus 16 ~~v~vy~~~~Cp~C~~ak~~L~~~------~i~y~~idI~~~~~~~~~l~~~~~g~~~v--P~ifi 73 (99)
T 3qmx_A 16 AKIEIYTWSTCPFCMRALALLKRK------GVEFQEYCIDGDNEAREAMAARANGKRSL--PQIFI 73 (99)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHH------TCCCEEEECTTCHHHHHHHHHHTTTCCCS--CEEEE
T ss_pred CCEEEEEcCCChhHHHHHHHHHHC------CCCCEEEEcCCCHHHHHHHHHHhCCCCCC--CEEEE
Confidence 3577899999999999 7777654 3567788988876655444 88899 99854
No 370
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.07 E-value=0.00042 Score=56.66 Aligned_cols=65 Identities=15% Similarity=0.119 Sum_probs=43.4
Q ss_pred hhhHHHHhhcCCcEEEEEEECCCCccCCCh--hHHHHHHHHhcCccEEEEEeCccch-------hhHhHhCCccCCCcEE
Q 013319 206 LQVFKKEIVEKGMTWLLFFYSPSSNRDGYE--SVIEEVANSMEGALKVGSINCETEA-------SLCKELGVHRPRSPRI 276 (445)
Q Consensus 206 ~~~f~~~v~~~~~~~lV~Fyap~C~~C~~~--p~~~~~a~~l~~~v~~~~Vdc~~~~-------~lc~~~~I~~~~~Pti 276 (445)
.+.+++.+.. . -++.|++|||++|+.+ +.++++. ...+.+..||++.++ .+.+.+++..+ |+|
T Consensus 15 ~~~~~~~i~~-~--~Vvvf~~~~Cp~C~~alk~~L~~~~---~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tv--P~v 86 (118)
T 3c1r_A 15 IKHVKDLIAE-N--EIFVASKTYCPYCHAALNTLFEKLK---VPRSKVLVLQLNDMKEGADIQAALYEINGQRTV--PNI 86 (118)
T ss_dssp HHHHHHHHHH-S--SEEEEECSSCHHHHHHHHHHHTTSC---CCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSS--CEE
T ss_pred HHHHHHHHcc-C--cEEEEEcCCCcCHHHHHHHHHHHcC---CCCCCeEEEECccCCChHHHHHHHHHHhCCCCc--CEE
Confidence 3455554433 3 2667999999999874 2222211 013788899998764 57888999999 998
Q ss_pred EE
Q 013319 277 FA 278 (445)
Q Consensus 277 ~~ 278 (445)
++
T Consensus 87 fi 88 (118)
T 3c1r_A 87 YI 88 (118)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 371
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.06 E-value=0.0044 Score=50.73 Aligned_cols=82 Identities=13% Similarity=0.133 Sum_probs=56.4
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCC---------------------ChHHHHHcCCCCCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDV---------------------SDPAVKKLGVDALP 382 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~---------------------~~~l~~~f~V~~~P 382 (445)
.+++++|.|...... .+.+..++..+. .+.|+.+.+..+ +..++++|+|..+|
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P 101 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQP 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCC
Confidence 456888888754332 356677777776 677766655431 57899999999999
Q ss_pred eEEEEccCCcccccc---cccChhhHHHHHHH
Q 013319 383 AIVGWLSNGEKDVLK---TGISVKDQKSSIHE 411 (445)
Q Consensus 383 tlv~~~~~~~~~~~~---~~~~~~~~~~~~~~ 411 (445)
+++++.+++....+. +..+.+++.++++.
T Consensus 102 ~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~ 133 (136)
T 1lu4_A 102 AFVFYRADGTSTFVNNPTAAMSQDELSGRVAA 133 (136)
T ss_dssp EEEEECTTSCEEEECCSSSCCCHHHHHHHHHH
T ss_pred EEEEECCCCcEEEEEcCCCccCHHHHHHHHHH
Confidence 999997777654555 55566666555543
No 372
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.04 E-value=0.00036 Score=52.45 Aligned_cols=50 Identities=12% Similarity=0.224 Sum_probs=38.5
Q ss_pred EEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccch----hhHhHhCCccCCCcEEEE
Q 013319 221 LLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEA----SLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 221 lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~----~lc~~~~I~~~~~Pti~~ 278 (445)
++.|+++||++|+. .+.+++. .+.+..+|++.++ .+.+.+++..+ |++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~~~~v--P~l~~ 57 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSGRTTV--PQIFI 57 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHSSCCS--CEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhCCCCc--CEEEE
Confidence 67899999999999 8777654 3566778887653 35677899999 99854
No 373
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.03 E-value=0.00032 Score=56.69 Aligned_cols=61 Identities=10% Similarity=0.175 Sum_probs=40.7
Q ss_pred hHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc----h----hhHhHhCCccCCCcEEEE
Q 013319 208 VFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE----A----SLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 208 ~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~----~----~lc~~~~I~~~~~Pti~~ 278 (445)
++.+.+...+. ++.|+++||++|+. .+.++++ .+.+-.+|++.. + .+.+..++..+ |+|++
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tv--P~ifi 79 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRL------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTV--PNVFV 79 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSS--CEEEE
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHc------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCc--CEEEE
Confidence 33333444443 67799999999999 8777754 344556677652 2 24555799999 99854
No 374
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.03 E-value=0.003 Score=65.17 Aligned_cols=85 Identities=9% Similarity=0.180 Sum_probs=61.7
Q ss_pred cCCCCEEEEEecCCC-----ChHHHHHHHHHhhc---cceEEEEeecC-CChHHHHHcCCCCCCeEEEEccC---Cc-cc
Q 013319 328 KARLPSVLLLSTKKE-----TPIIWRVLSGMYHE---RLNFYDTEVHD-VSDPAVKKLGVDALPAIVGWLSN---GE-KD 394 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~---~~~f~~~~v~~-~~~~l~~~f~V~~~Ptlv~~~~~---~~-~~ 394 (445)
..+++++|.|+.... ..+.|..++..+.+ .+.|+.+++.. .+.+++++|+|.++||+++|..+ +. ..
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~ 107 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGAT 107 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEE
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCcee
Confidence 445788888887653 36889999999987 67786665542 47899999999999999999863 22 23
Q ss_pred ccccccChhhHHHHHHHH
Q 013319 395 VLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~ 412 (445)
.+.++.+.++++.++...
T Consensus 108 ~~~g~~~~~~L~~~l~~~ 125 (519)
T 3t58_A 108 LPGAGANVQTLRMRLIDA 125 (519)
T ss_dssp ECCSSCCHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHH
Confidence 455667776666555443
No 375
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.02 E-value=0.003 Score=51.72 Aligned_cols=82 Identities=13% Similarity=0.070 Sum_probs=52.4
Q ss_pred CCCCEEEEEecCCCC-----hHHH---HHHHHHhhccceEEEEeecC-CChHHHHHcCCCCCCeEEEEccCCc-cccccc
Q 013319 329 ARLPSVLLLSTKKET-----PIIW---RVLSGMYHERLNFYDTEVHD-VSDPAVKKLGVDALPAIVGWLSNGE-KDVLKT 398 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~---~~lA~~~~~~~~f~~~~v~~-~~~~l~~~f~V~~~Ptlv~~~~~~~-~~~~~~ 398 (445)
.+++++|.|+..... .+.+ ..++..+...+.++.+.+.. .+..++++|+|..+|+++++.++++ ...+.+
T Consensus 26 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G 105 (130)
T 2kuc_A 26 EDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVG 105 (130)
T ss_dssp HSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEES
T ss_pred cCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecC
Confidence 467888888875433 2333 45555555566665554432 3578999999999999998866554 334556
Q ss_pred ccChhhHHHHHH
Q 013319 399 GISVKDQKSSIH 410 (445)
Q Consensus 399 ~~~~~~~~~~~~ 410 (445)
..+.+++.+++.
T Consensus 106 ~~~~~~l~~~l~ 117 (130)
T 2kuc_A 106 AEDAPELLKKVK 117 (130)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 556655544443
No 376
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.01 E-value=0.0013 Score=66.67 Aligned_cols=88 Identities=8% Similarity=0.025 Sum_probs=60.1
Q ss_pred ceeccccccchhhhccCCCCEEEEEecCCC-----ChHHHHHHHHHhhc--------cceEEEEeecCCChHHHHHcCCC
Q 013319 313 SKRISLNRIEFTFDAKARLPSVLLLSTKKE-----TPIIWRVLSGMYHE--------RLNFYDTEVHDVSDPAVKKLGVD 379 (445)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~--------~~~f~~~~v~~~~~~l~~~f~V~ 379 (445)
+..++.++++........++++|.|+...- ..+.|..++..+.. .+.|+.+++. .+.+++++|+|.
T Consensus 25 V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d-~~~~la~~y~V~ 103 (470)
T 3qcp_A 25 VVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA-SEVDLCRKYDIN 103 (470)
T ss_dssp EEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT-TCHHHHHHTTCC
T ss_pred cEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC-CCHHHHHHcCCC
Confidence 334444444433333455789999987654 26789999999872 4777655544 678999999999
Q ss_pred CCCeEEEEccCCc--ccccccccC
Q 013319 380 ALPAIVGWLSNGE--KDVLKTGIS 401 (445)
Q Consensus 380 ~~Ptlv~~~~~~~--~~~~~~~~~ 401 (445)
.+||+++|.+++. ...|.+..+
T Consensus 104 ~~PTlilf~~gg~~~~~~y~G~r~ 127 (470)
T 3qcp_A 104 FVPRLFFFYPRDSCRSNEECGTSS 127 (470)
T ss_dssp SSCEEEEEEESSCCCTTSCCCCCC
T ss_pred ccCeEEEEECCCceEEEEeeCCCC
Confidence 9999999987543 445555443
No 377
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.99 E-value=0.0011 Score=59.51 Aligned_cols=54 Identities=15% Similarity=0.180 Sum_probs=42.7
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchh---hHhHhCCccC
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEAS---LCKELGVHRP 271 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~---lc~~~~I~~~ 271 (445)
+++++|.|| +.||+.|.. .|.+.++.+++ ..+.+..|+++.... .++++++..+
T Consensus 78 Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~f 136 (200)
T 3zrd_A 78 GKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEGLSNV 136 (200)
T ss_dssp TSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTTCTTE
T ss_pred CCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcCCCCc
Confidence 567889998 789999999 99999999999 678999999886433 3555555444
No 378
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.99 E-value=0.00052 Score=59.15 Aligned_cols=55 Identities=11% Similarity=0.096 Sum_probs=44.5
Q ss_pred CCcEEEEEEEC-CCCccCCC-hhHHHHHHHHhcCccEEEEEeCccch---hhHhHhCCccC
Q 013319 216 KGMTWLLFFYS-PSSNRDGY-ESVIEEVANSMEGALKVGSINCETEA---SLCKELGVHRP 271 (445)
Q Consensus 216 ~~~~~lV~Fya-p~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~---~lc~~~~I~~~ 271 (445)
.++++||.||+ .||++|.. .|.+.++.+++ ..+.+..|+++... ..++++++..+
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~ 100 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNA 100 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTS
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCc
Confidence 34689999995 99999999 99999999988 77999999987643 45677776445
No 379
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.97 E-value=0.00042 Score=53.58 Aligned_cols=51 Identities=12% Similarity=0.263 Sum_probs=38.8
Q ss_pred EEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchh----hHhHhCCccCCCcEEEE
Q 013319 220 WLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEAS----LCKELGVHRPRSPRIFA 278 (445)
Q Consensus 220 ~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~----lc~~~~I~~~~~Pti~~ 278 (445)
-++.|+++||++|+. .+.+++. .+.+..+|+++++. +.+.+++..+ |++++
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~~~~v--P~l~~ 62 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSGRNTF--PQIFI 62 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHTSSCC--CEEEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhCCCCc--CEEEE
Confidence 377899999999999 7777653 36677888887643 4557899999 98643
No 380
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=96.92 E-value=0.009 Score=48.64 Aligned_cols=82 Identities=16% Similarity=0.156 Sum_probs=56.4
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeec----------------------CCChHHHHHcCCCCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVH----------------------DVSDPAVKKLGVDAL 381 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~----------------------~~~~~l~~~f~V~~~ 381 (445)
.+++++|.|+..... .+.+..++..+. .+.|+.+.+. +.+..++++|+|..+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 102 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQ 102 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCC
Confidence 456788888754332 355677777776 6777666553 235679999999999
Q ss_pred CeEEEEccCCcccccccccChhhHHHHHHH
Q 013319 382 PAIVGWLSNGEKDVLKTGISVKDQKSSIHE 411 (445)
Q Consensus 382 Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (445)
|+++++.+++....+.+..+.+++.+.+..
T Consensus 103 P~~~~id~~g~i~~~~g~~~~~~l~~~l~~ 132 (136)
T 1zzo_A 103 PAYAFVDPHGNVDVVRGRMSQDELTRRVTA 132 (136)
T ss_dssp SEEEEECTTCCEEEEESCCCHHHHHHHHHH
T ss_pred ceEEEECCCCCEEEEecCCCHHHHHHHHHH
Confidence 999999877765456666666666555543
No 381
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.91 E-value=0.00084 Score=53.29 Aligned_cols=70 Identities=3% Similarity=-0.019 Sum_probs=46.1
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc-----hhhH----hHhCCccCCCcEEEEeccCCCCCCC
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE-----ASLC----KELGVHRPRSPRIFAYSYKAGDKGS 288 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~-----~~lc----~~~~I~~~~~Pti~~f~~~~~~~g~ 288 (445)
.-++.|+++||++|+. .+.+++.. +.+-.+|++.. .++. +..++..+ |+|++- ++
T Consensus 22 ~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~v--P~l~i~------~~- 86 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSF--PTTIIN------DE- 86 (103)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCS--CEEEET------TT-
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCCCCcc--CEEEEC------CC-
Confidence 3577899999999999 87777652 44555666641 2232 23588999 999872 22
Q ss_pred eeeecCcccHHHHHHHH
Q 013319 289 LVEYNEHLVAKNLKSFC 305 (445)
Q Consensus 289 ~~~y~g~~~~~~l~~fi 305 (445)
.+.|..+.++|.+++
T Consensus 87 --~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 --KAIVGFKEKEIRESL 101 (103)
T ss_dssp --EEEESCCHHHHHHHT
T ss_pred --EEEEcCCHHHHHHHh
Confidence 234555777777665
No 382
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.91 E-value=0.00066 Score=58.55 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=42.4
Q ss_pred CcEEEEEEE-CCCCccCC-C-hhHHHHHHHHhcC-ccE-EEEEeCccc---hhhHhHhCCc
Q 013319 217 GMTWLLFFY-SPSSNRDG-Y-ESVIEEVANSMEG-ALK-VGSINCETE---ASLCKELGVH 269 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~-~-~p~~~~~a~~l~~-~v~-~~~Vdc~~~---~~lc~~~~I~ 269 (445)
+++++|.|| +.||+.|. . .|.+.++.++++. .+. +..|+.+.. ...++++++.
T Consensus 35 gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~ 95 (162)
T 1tp9_A 35 GKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPEN 95 (162)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTC
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCC
Confidence 457889999 89999999 9 9999999999874 688 999988753 3456666664
No 383
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.90 E-value=0.00099 Score=54.55 Aligned_cols=79 Identities=14% Similarity=0.155 Sum_probs=53.6
Q ss_pred CCCCEEEEEecCC-----CChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 329 ARLPSVLLLSTKK-----ETPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 329 ~~~~~vvlF~~~~-----~~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
.+++++|+|+... ...+.+..++..+. .+.|+.+++. .+..++++|+|..+||++++..++....+.+ .+.+
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~ 111 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVD-ELKEVAEKYNVEAMPTFLFIKDGAEADKVVG-ARKD 111 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTT-TSGGGHHHHTCCSSCCCCBCTTTTCCBCCCT-TCTT
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEecc-chHHHHHHcCCCccceEEEEeCCeEEEEEeC-CCHH
Confidence 4567788886543 24678889998886 5777555443 5688999999999999997744444444443 5555
Q ss_pred hHHHHHH
Q 013319 404 DQKSSIH 410 (445)
Q Consensus 404 ~~~~~~~ 410 (445)
++..++.
T Consensus 112 ~l~~~l~ 118 (130)
T 1wmj_A 112 DLQNTIV 118 (130)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 6654444
No 384
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.90 E-value=0.0011 Score=58.14 Aligned_cols=55 Identities=11% Similarity=0.085 Sum_probs=41.0
Q ss_pred CcEEEEEEE-CCCCccCC-C-hhHHHHHHHHhcC-ccEEEE-EeCccc---hhhHhHhCCc-cC
Q 013319 217 GMTWLLFFY-SPSSNRDG-Y-ESVIEEVANSMEG-ALKVGS-INCETE---ASLCKELGVH-RP 271 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~-~-~p~~~~~a~~l~~-~v~~~~-Vdc~~~---~~lc~~~~I~-~~ 271 (445)
+++++|.|| +.||+.|. . .|.+.+++++++. .+.+.. |.++.. ...++++++. .|
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~f 106 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKV 106 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTC
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCce
Confidence 444555555 99999999 7 8999999999976 577665 887763 4567778776 46
No 385
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.89 E-value=0.017 Score=59.55 Aligned_cols=170 Identities=10% Similarity=0.071 Sum_probs=99.1
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCc
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEH 295 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~ 295 (445)
.+++.+.++.+.|..|.. ....++++. +.+.+.+-..+ .+. ... |++.+...+. ...+.|.|-
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~-~s~~i~~~~~~--~~~--------~~~--p~~~~~~~~~---~~~i~f~g~ 81 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAE-LSDKVTFKEDN--TLP--------VRK--PSFLITNPGS---QQGPRFAGS 81 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHT-TCTTEEEEECT--TSS--------SCS--SEEEEECTTC---CCSCEEESC
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHH-hCCceEEEEcC--Ccc--------cCC--CEEEEecCCC---cceEEEecc
Confidence 345666667777888877 666666654 35567763321 110 345 9999974321 234788887
Q ss_pred ccHHHHHHHHHhhCC--CCceeccccccchhhhccCCCCEEEEEecCC-CC----hHHHHHHHHHhhccceEEEEeecCC
Q 013319 296 LVAKNLKSFCRDHLP--RFSKRISLNRIEFTFDAKARLPSVLLLSTKK-ET----PIIWRVLSGMYHERLNFYDTEVHDV 368 (445)
Q Consensus 296 ~~~~~l~~fi~~~lp--~~~~~i~~~~~~~~~~~~~~~~~vvlF~~~~-~~----~~~~~~lA~~~~~~~~f~~~~v~~~ 368 (445)
..=.++..|+...+. .....++.+..+.. ......+.+++|+..+ .. .+.+..+|..+. ++.+..+++. .
T Consensus 82 p~g~e~~s~~~~l~~~~~~~~~~~~~~~~~i-~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~-~ 158 (521)
T 1hyu_A 82 PLGHEFTSLVLALLWTGGHPSKEAQSLLEQI-RDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGG-T 158 (521)
T ss_dssp CCGGGHHHHHHHHHHHTTCCCCSCHHHHHHH-HHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETT-T
T ss_pred CcchhHHHHHHHHHhhcCCCCCCCHHHHHHH-HhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEech-h
Confidence 666677777765332 11222232222222 2223445566665533 22 456777777765 6777655544 6
Q ss_pred ChHHHHHcCCCCCCeEEEEccCCcccccccccChhhHHHHH
Q 013319 369 SDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQKSSI 409 (445)
Q Consensus 369 ~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~ 409 (445)
.++++++|+|.+.|++++ |++. +..+..+.+++..++
T Consensus 159 ~~~~~~~~~i~svPt~~i---~g~~-~~~G~~~~~~l~~~l 195 (521)
T 1hyu_A 159 FQNEITERNVMGVPAVFV---NGKE-FGQGRMTLTEIVAKV 195 (521)
T ss_dssp CHHHHHHTTCCSSSEEEE---TTEE-EEESCCCHHHHHHHH
T ss_pred hHHHHHHhCCCccCEEEE---CCEE-EecCCCCHHHHHHHH
Confidence 799999999999999985 4433 333444555655443
No 386
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.84 E-value=0.0013 Score=55.92 Aligned_cols=81 Identities=19% Similarity=0.244 Sum_probs=57.9
Q ss_pred cCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEe--------------------------------------
Q 013319 215 EKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSIN-------------------------------------- 255 (445)
Q Consensus 215 ~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vd-------------------------------------- 255 (445)
....+.||.|..++|++|++ .+.++++ +.+++..++
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~ 86 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM-----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC-----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc-----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 34568999999999999999 8887654 233333221
Q ss_pred ----Cc----cchhhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCcccHHHHHHHHHhhCC
Q 013319 256 ----CE----TEASLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEHLVAKNLKSFCRDHLP 310 (445)
Q Consensus 256 ----c~----~~~~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~~~~~~l~~fi~~~lp 310 (445)
|. ++..+++++||+++ ||+++- +|+ ...|..+.+.|.++|.+...
T Consensus 87 ~~~~~~~~v~~~~~la~~~gI~gt--Pt~vi~------nG~--~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 87 GGSICDNPVAETTSLGEQFGFNGT--PTLVFP------NGR--TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp TCCCCSCSHHHHHHHHHHTTCCSS--CEEECT------TSC--EEESCCCTTHHHHHHHHTSC
T ss_pred ccHHHHHHHHHHHHHHHHhCCCcc--CEEEEE------CCE--EeeCCCCHHHHHHHHHHHHH
Confidence 11 13567889999999 999982 343 46688888999999987654
No 387
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.84 E-value=0.0032 Score=55.60 Aligned_cols=40 Identities=5% Similarity=0.057 Sum_probs=33.6
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeC
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINC 256 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc 256 (445)
..+.|+.|+.++|++|.. .|.+.++.+++.+.|.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 457899999999999999 9999999998876677765554
No 388
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.79 E-value=0.012 Score=48.68 Aligned_cols=83 Identities=12% Similarity=0.162 Sum_probs=56.7
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeec--------------------------CCChHHHHHcC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVH--------------------------DVSDPAVKKLG 377 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~--------------------------~~~~~l~~~f~ 377 (445)
.+++++|.|...... .+.+.+++..+.+++.|+.+.+. +.+..+++.|+
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFE 107 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhC
Confidence 456888888764432 45677788888777777666542 24568999999
Q ss_pred CCCCCeEEEEccCCccc-ccccccChhhHHHHHHH
Q 013319 378 VDALPAIVGWLSNGEKD-VLKTGISVKDQKSSIHE 411 (445)
Q Consensus 378 V~~~Ptlv~~~~~~~~~-~~~~~~~~~~~~~~~~~ 411 (445)
|..+|+++++.+++... .+.+..+.+++.+.+..
T Consensus 108 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 142 (148)
T 2b5x_A 108 NEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNR 142 (148)
T ss_dssp CCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHH
Confidence 99999999887777543 34454555666555543
No 389
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=96.75 E-value=0.004 Score=54.27 Aligned_cols=39 Identities=13% Similarity=0.111 Sum_probs=32.4
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEe
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSIN 255 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vd 255 (445)
+.+.||+|+.-.|+||+. .|.+.++.+++...+++..+.
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~ 60 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNH 60 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEe
Confidence 357899999999999999 999999999887766665543
No 390
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.69 E-value=0.0053 Score=51.06 Aligned_cols=64 Identities=16% Similarity=0.158 Sum_probs=44.0
Q ss_pred CCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCccccccc
Q 013319 330 RLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKT 398 (445)
Q Consensus 330 ~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~ 398 (445)
+++++|.|+..+. ..+.+..+|..+. .+.|+.+++... .++|+|..+||+++|..++....+.+
T Consensus 30 ~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~----~~~~~i~~~Pt~~~~~~G~~v~~~~G 98 (135)
T 2dbc_A 30 DLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSC----IEHYHDNCLPTIFVYKNGQIEGKFIG 98 (135)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSS----CSSCCSSCCSEEEEESSSSCSEEEES
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcC----cccCCCCCCCEEEEEECCEEEEEEEe
Confidence 3678888887654 2577888998884 477755544322 27899999999998875554444433
No 391
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.61 E-value=0.0069 Score=53.21 Aligned_cols=92 Identities=5% Similarity=0.028 Sum_probs=64.3
Q ss_pred hcCCcEEEEEEECCCCccCCC--hhHH--HHHHHHhcCccEEEEEeCccch---------------hhHh---HhCCccC
Q 013319 214 VEKGMTWLLFFYSPSSNRDGY--ESVI--EEVANSMEGALKVGSINCETEA---------------SLCK---ELGVHRP 271 (445)
Q Consensus 214 ~~~~~~~lV~Fyap~C~~C~~--~p~~--~~~a~~l~~~v~~~~Vdc~~~~---------------~lc~---~~~I~~~ 271 (445)
.+..+..+|++++|||..|.. ..+| +++.+.++..+.+..+|.+... .++. .+++..|
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~ 131 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQF 131 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTC
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCC
Confidence 345679999999999999877 3444 4466666666778888887654 3443 3899999
Q ss_pred CCcEEEEeccCCCCCCCe-eeecCcccHHHHHHHHHhh
Q 013319 272 RSPRIFAYSYKAGDKGSL-VEYNEHLVAKNLKSFCRDH 308 (445)
Q Consensus 272 ~~Pti~~f~~~~~~~g~~-~~y~g~~~~~~l~~fi~~~ 308 (445)
|++.++.... ...++ ....|..+.++|.+.+...
T Consensus 132 --P~l~ii~~~~-~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 132 --PLFLIIMGKR-SSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp --SEEEEECCCS-SCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred --CeEEEEEcCC-CceEEEEEEeCCCCHHHHHHHHHHH
Confidence 9999983321 12233 3478988888888777644
No 392
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.59 E-value=0.0017 Score=49.37 Aligned_cols=72 Identities=15% Similarity=0.094 Sum_probs=46.1
Q ss_pred EEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc----hhhHhHhCC-----ccCCCcEEEEeccCCCCCCCe
Q 013319 220 WLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE----ASLCKELGV-----HRPRSPRIFAYSYKAGDKGSL 289 (445)
Q Consensus 220 ~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~----~~lc~~~~I-----~~~~~Pti~~f~~~~~~~g~~ 289 (445)
-++.|+++||++|+. ...+++. .-.+.+..||...+ .++.+.++. ..+ |+|++ +|+.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~----~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~v--P~i~i-------~g~~ 71 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEEN----NIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTV--PQIFI-------DDEH 71 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT----TCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSS--CEEEE-------TTEE
T ss_pred EEEEEEcCCChhHHHHHHHHHHc----CCCceEEEeecCCChhHHHHHHHHhCCCCCCCCcc--CEEEE-------CCEE
Confidence 477899999999999 7666543 22345555665554 357777787 888 99865 2332
Q ss_pred eeecCcccHHHHHHHHHhhC
Q 013319 290 VEYNEHLVAKNLKSFCRDHL 309 (445)
Q Consensus 290 ~~y~g~~~~~~l~~fi~~~l 309 (445)
+ | ..++|.+++.+.+
T Consensus 72 i---~--g~~~i~~~~~~~~ 86 (89)
T 3msz_A 72 I---G--GFTELKANADKIL 86 (89)
T ss_dssp E---E--SHHHHHHTHHHHT
T ss_pred E---e--ChHHHHHHHHHHh
Confidence 2 2 2356666666544
No 393
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.57 E-value=0.0011 Score=59.09 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=37.9
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE 259 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~ 259 (445)
..+.||+|+++||+||+. .|.++++++++.+.+.|..+++.-+
T Consensus 24 ~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~~~ 67 (193)
T 3hz8_A 24 GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVVWQ 67 (193)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECCCS
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCCCC
Confidence 468999999999999999 9999999999887888888887643
No 394
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.57 E-value=0.0054 Score=49.98 Aligned_cols=61 Identities=11% Similarity=0.160 Sum_probs=45.7
Q ss_pred CCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCccccc
Q 013319 331 LPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVL 396 (445)
Q Consensus 331 ~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~ 396 (445)
.+++|.|+..+. ..+.+..||.++. .++|+.+++.. .+++|+|...||+++|++++....+
T Consensus 24 ~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~----~~~~~~v~~~PT~~~fk~G~~v~~~ 89 (118)
T 3evi_A 24 VWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNS----CIQHYHDNCLPTIFVYKNGQIEAKF 89 (118)
T ss_dssp CEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGG----TSTTCCGGGCSEEEEEETTEEEEEE
T ss_pred CeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHH----hHHHCCCCCCCEEEEEECCEEEEEE
Confidence 378888877654 3688999999986 48897665442 2689999999999988876654444
No 395
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=96.50 E-value=0.0085 Score=54.64 Aligned_cols=86 Identities=9% Similarity=-0.009 Sum_probs=59.2
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc-------------------------------hhhHhH
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE-------------------------------ASLCKE 265 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~-------------------------------~~lc~~ 265 (445)
++|+.|++.||+.|.. .+.+.++.++++. .+.+..|+++.. ..+++.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 4566667999999999 9999999999976 688988888742 234666
Q ss_pred hCCcc----------CCCcEEEEeccCCCCCCCeee-ecC----cccHHHHHHHHHhh
Q 013319 266 LGVHR----------PRSPRIFAYSYKAGDKGSLVE-YNE----HLVAKNLKSFCRDH 308 (445)
Q Consensus 266 ~~I~~----------~~~Pti~~f~~~~~~~g~~~~-y~g----~~~~~~l~~fi~~~ 308 (445)
|++.. ...|+++++. .+|++.. +.+ .++.++|...|...
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID----~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFG----PDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEEC----TTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred hCCCCcccccCCCccccceEEEEEC----CCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 77631 1138888882 4554433 222 34677887777654
No 396
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=96.50 E-value=0.0024 Score=55.46 Aligned_cols=55 Identities=15% Similarity=0.172 Sum_probs=42.9
Q ss_pred CcEEEEEEE-CCCCccCCC--hhHHHHHHHHhcC-cc-EEEEEeCccc---hhhHhHhCCc-cC
Q 013319 217 GMTWLLFFY-SPSSNRDGY--ESVIEEVANSMEG-AL-KVGSINCETE---ASLCKELGVH-RP 271 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~--~p~~~~~a~~l~~-~v-~~~~Vdc~~~---~~lc~~~~I~-~~ 271 (445)
+++++|.|| +.||+.|.. .|.+.++.++++. .+ .+..|+.+.. ...++++++. .|
T Consensus 31 Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~f 94 (167)
T 2wfc_A 31 GKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKV 94 (167)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTS
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcce
Confidence 456778877 999999984 8999999998864 68 9999998753 3567777765 35
No 397
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=96.42 E-value=0.031 Score=46.65 Aligned_cols=82 Identities=9% Similarity=-0.007 Sum_probs=53.7
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhc-cceEEEEeecCC---------------------ChHHHHHcCCCCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHE-RLNFYDTEVHDV---------------------SDPAVKKLGVDAL 381 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~-~~~f~~~~v~~~---------------------~~~l~~~f~V~~~ 381 (445)
..++++|.|...... .+.+..++..+.+ .+.|+.+.+... +..+++.|+|..+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 456778888754332 3456777777765 377766655432 4579999999999
Q ss_pred CeEEEEccCCccc-ccccccChhhHHHHHH
Q 013319 382 PAIVGWLSNGEKD-VLKTGISVKDQKSSIH 410 (445)
Q Consensus 382 Ptlv~~~~~~~~~-~~~~~~~~~~~~~~~~ 410 (445)
|+++++.+++... .+.+..+.+++...+.
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~~l~~~l~ 134 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTESMIHDYMN 134 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHHHHHHHHH
T ss_pred CeEEEECCCCcEEEEEeCCCCHHHHHHHHH
Confidence 9999887776543 4445556555544443
No 398
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.40 E-value=0.0031 Score=50.51 Aligned_cols=60 Identities=8% Similarity=0.137 Sum_probs=41.8
Q ss_pred hHHHHhhcCCcEEEEEEEC-----CCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchh----hHhHhCCccCCCcEEE
Q 013319 208 VFKKEIVEKGMTWLLFFYS-----PSSNRDGY-ESVIEEVANSMEGALKVGSINCETEAS----LCKELGVHRPRSPRIF 277 (445)
Q Consensus 208 ~f~~~v~~~~~~~lV~Fya-----p~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~----lc~~~~I~~~~~Pti~ 277 (445)
.+++.+ ...+ +|.|+. +||++|+. ...+++. .+.+..||+++++. +.+..+...+ |+|+
T Consensus 7 ~~~~~i-~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~v--P~if 75 (109)
T 1wik_A 7 GLKVLT-NKAS--VMLFMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSNWPTY--PQLY 75 (109)
T ss_dssp CHHHHH-TTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHSCCSS--CEEE
T ss_pred HHHHHh-ccCC--EEEEEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhCCCCC--CEEE
Confidence 354544 3343 556777 99999999 7666543 47788999988764 4445678888 9864
Q ss_pred E
Q 013319 278 A 278 (445)
Q Consensus 278 ~ 278 (445)
+
T Consensus 76 i 76 (109)
T 1wik_A 76 V 76 (109)
T ss_dssp C
T ss_pred E
Confidence 3
No 399
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=96.37 E-value=0.0051 Score=56.55 Aligned_cols=40 Identities=10% Similarity=0.145 Sum_probs=34.4
Q ss_pred EEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCcc
Q 013319 219 TWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCET 258 (445)
Q Consensus 219 ~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~ 258 (445)
++||.|| +.||+.|.. .+.+.++.++++. .+.+..|+++.
T Consensus 31 ~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~ 73 (233)
T 2v2g_A 31 WGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDN 73 (233)
T ss_dssp EEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred eEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCC
Confidence 6777787 899999999 9999999999875 68888888764
No 400
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.37 E-value=0.0017 Score=56.55 Aligned_cols=55 Identities=2% Similarity=-0.031 Sum_probs=43.9
Q ss_pred cEEEEEEECCCCccCCC--hhHHHHHHHHhcC-ccE-EEEEeCccc---hhhHhHhCCc-cCCCc
Q 013319 218 MTWLLFFYSPSSNRDGY--ESVIEEVANSMEG-ALK-VGSINCETE---ASLCKELGVH-RPRSP 274 (445)
Q Consensus 218 ~~~lV~Fyap~C~~C~~--~p~~~~~a~~l~~-~v~-~~~Vdc~~~---~~lc~~~~I~-~~~~P 274 (445)
.++|+.|++.||+.|.. .|.+.++.++++. .+. +..|+.+.. ...++++++. .| |
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~f--p 107 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAI--E 107 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTS--E
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCce--E
Confidence 47788899999999986 6999999998864 577 999998753 4567788873 66 7
No 401
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=96.30 E-value=0.046 Score=45.15 Aligned_cols=84 Identities=10% Similarity=0.035 Sum_probs=53.2
Q ss_pred CCCCEEEEEecCC-----CChHHHHHHHHHhhcc-ceEEEEeecCCChH-------------------------HHHHcC
Q 013319 329 ARLPSVLLLSTKK-----ETPIIWRVLSGMYHER-LNFYDTEVHDVSDP-------------------------AVKKLG 377 (445)
Q Consensus 329 ~~~~~vvlF~~~~-----~~~~~~~~lA~~~~~~-~~f~~~~v~~~~~~-------------------------l~~~f~ 377 (445)
.+++++|.|.... ...+.+..+...+.++ +.|+.+.+. .+.+ +++.|+
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIE-RKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECC-SSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEec-CCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 4567788775432 2256778888888776 777655554 3344 899999
Q ss_pred CCCCCeEEEEccCCcccccccccChhhHHHHHHHHHhh
Q 013319 378 VDALPAIVGWLSNGEKDVLKTGISVKDQKSSIHELSKL 415 (445)
Q Consensus 378 V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (445)
|..+|+++++.+++....-..+ ..++...+..+.+.
T Consensus 109 i~~~P~~~lid~~G~i~~~~~g--~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIAKRIG--YENLDDFLVQYEKS 144 (148)
T ss_dssp CCSSCEEEEECTTCBEEEESCC--GGGHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEecCC--HHHHHHHHHHHHHH
Confidence 9999999988777764322222 24444444444443
No 402
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.30 E-value=0.00065 Score=55.86 Aligned_cols=79 Identities=10% Similarity=0.054 Sum_probs=50.5
Q ss_pred cCCCCEEEEEecCCC-----ChHHH---HHHHHHhhccceEEEEeecC-CChHHHHHcCCCCCCeEEEEcc-CCc---cc
Q 013319 328 KARLPSVLLLSTKKE-----TPIIW---RVLSGMYHERLNFYDTEVHD-VSDPAVKKLGVDALPAIVGWLS-NGE---KD 394 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~-----~~~~~---~~lA~~~~~~~~f~~~~v~~-~~~~l~~~f~V~~~Ptlv~~~~-~~~---~~ 394 (445)
..+++++|.|+.... ..+.+ ..++..+.+.+.|+.+.+.. .+..++++|+|..+||++++.+ ++. ..
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~ 96 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVG 96 (130)
Confidence 345677777765432 23445 77777777777776665542 4578999999999999998853 343 23
Q ss_pred ccccccChhhHH
Q 013319 395 VLKTGISVKDQK 406 (445)
Q Consensus 395 ~~~~~~~~~~~~ 406 (445)
.+.+..+.+++.
T Consensus 97 ~~~G~~~~~~l~ 108 (130)
T 2lst_A 97 RLFGSRPRAEFL 108 (130)
Confidence 454444444443
No 403
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.25 E-value=0.0031 Score=51.02 Aligned_cols=62 Identities=11% Similarity=0.228 Sum_probs=41.9
Q ss_pred hhhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCcc--c-----hhhHhHhCCccCCCcEEE
Q 013319 206 LQVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCET--E-----ASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 206 ~~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~--~-----~~lc~~~~I~~~~~Pti~ 277 (445)
.+.+++.+ +.+. ++.|.++||++|++ .+.+++. .+.+-.+|++. + ..+.+..|...+ |+++
T Consensus 7 ~~~~~~~i-~~~~--v~vy~~~~Cp~C~~ak~~L~~~------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tv--P~vf 75 (114)
T 3h8q_A 7 RRHLVGLI-ERSR--VVIFSKSYCPHSTRVKELFSSL------GVECNVLELDQVDDGARVQEVLSEITNQKTV--PNIF 75 (114)
T ss_dssp HHHHHHHH-HHCS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSS--CEEE
T ss_pred HHHHHHHh-ccCC--EEEEEcCCCCcHHHHHHHHHHc------CCCcEEEEecCCCChHHHHHHHHHHhCCCcc--CEEE
Confidence 34565544 3343 55699999999999 7777653 34566677764 2 235567788899 9987
Q ss_pred E
Q 013319 278 A 278 (445)
Q Consensus 278 ~ 278 (445)
+
T Consensus 76 i 76 (114)
T 3h8q_A 76 V 76 (114)
T ss_dssp E
T ss_pred E
Confidence 6
No 404
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=96.23 E-value=0.0053 Score=55.86 Aligned_cols=84 Identities=10% Similarity=0.052 Sum_probs=59.2
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc----------------------------hhhHhHhCC
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE----------------------------ASLCKELGV 268 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~----------------------------~~lc~~~~I 268 (445)
++|+.|+++||+.|.. .+.+.++.++++. .+.+..|+++.. ..+++.|++
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 4455557999999999 9999999999976 688999988642 245677777
Q ss_pred c------------cCCCcEEEEeccCCCCCCCeee-ec----CcccHHHHHHHHHhh
Q 013319 269 H------------RPRSPRIFAYSYKAGDKGSLVE-YN----EHLVAKNLKSFCRDH 308 (445)
Q Consensus 269 ~------------~~~~Pti~~f~~~~~~~g~~~~-y~----g~~~~~~l~~fi~~~ 308 (445)
. .. |+++++. .+|++.. +. ..++.++|...|...
T Consensus 114 ~~~~~~~~~g~~~~~--p~~flID----~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 114 MDEQEKDITGLPLTC--RCLFFIS----PEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp EEEEEECTTSCEEEC--EEEEEEC----TTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCcccccCCCCCccc--ceEEEEC----CCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 3 35 8888882 4554433 22 235778888777643
No 405
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.20 E-value=0.017 Score=50.10 Aligned_cols=42 Identities=12% Similarity=0.195 Sum_probs=34.4
Q ss_pred CCcEEEEEEECCCCc-cCCC-hhHHHHHHHHhcC---ccEEEEEeCc
Q 013319 216 KGMTWLLFFYSPSSN-RDGY-ESVIEEVANSMEG---ALKVGSINCE 257 (445)
Q Consensus 216 ~~~~~lV~Fyap~C~-~C~~-~p~~~~~a~~l~~---~v~~~~Vdc~ 257 (445)
.++++||.|+.+||+ .|.. .+.+.++.+.++. .|.+..|.++
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 457899999999997 5988 8888888877752 5888888876
No 406
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=96.18 E-value=0.0034 Score=55.51 Aligned_cols=53 Identities=6% Similarity=-0.017 Sum_probs=41.0
Q ss_pred EEEEEEECCCCccCCC--hhHHHHHHHHhcC-ccE-EEEEeCccc---hhhHhHhCCc-cC
Q 013319 219 TWLLFFYSPSSNRDGY--ESVIEEVANSMEG-ALK-VGSINCETE---ASLCKELGVH-RP 271 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~--~p~~~~~a~~l~~-~v~-~~~Vdc~~~---~~lc~~~~I~-~~ 271 (445)
++|+.|++.||+.|+. .|.+.+++++++. .+. +..|+++.. ...++++++. .+
T Consensus 59 vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~f 119 (184)
T 3uma_A 59 VVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKI 119 (184)
T ss_dssp EEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTS
T ss_pred EEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCce
Confidence 4455556999999986 6999999999975 577 999998763 4567777776 35
No 407
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.17 E-value=0.0031 Score=57.28 Aligned_cols=66 Identities=12% Similarity=0.136 Sum_probs=47.4
Q ss_pred CCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCccccccc
Q 013319 330 RLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKT 398 (445)
Q Consensus 330 ~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~ 398 (445)
..+++|.|+..+.. .+.|..||..|. .+.|+.+.+. +..++.+|+|..+||+++|..+.....+.+
T Consensus 120 ~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~--~~~l~~~~~i~~~PTl~~~~~G~~v~~~~G 190 (217)
T 2trc_P 120 VTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS--NTGAGDRFSSDVLPTLLVYKGGELISNFIS 190 (217)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH--HHTCSTTSCGGGCSEEEEEETTEEEEEETT
T ss_pred CcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC--cHHHHHHCCCCCCCEEEEEECCEEEEEEeC
Confidence 36788888765542 577888988885 6788666554 567899999999999998864443334433
No 408
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=96.13 E-value=0.03 Score=47.45 Aligned_cols=82 Identities=10% Similarity=0.033 Sum_probs=50.0
Q ss_pred CCCCEEEEEe-cCCCC-----hHHH---HHHHHHhhccceEEEEeecCC----------ChHHHHHcCCCCCCeEEEEcc
Q 013319 329 ARLPSVLLLS-TKKET-----PIIW---RVLSGMYHERLNFYDTEVHDV----------SDPAVKKLGVDALPAIVGWLS 389 (445)
Q Consensus 329 ~~~~~vvlF~-~~~~~-----~~~~---~~lA~~~~~~~~f~~~~v~~~----------~~~l~~~f~V~~~Ptlv~~~~ 389 (445)
.+++++|.|+ ..... .+.+ ..++..+...+.++.+.+... +..++++|+|.++||++++.+
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d~ 125 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFIDA 125 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEECT
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEcC
Confidence 4678888887 54432 2233 455554545566655544322 248999999999999999877
Q ss_pred CCccc-cccccc--ChhhHHHHHHH
Q 013319 390 NGEKD-VLKTGI--SVKDQKSSIHE 411 (445)
Q Consensus 390 ~~~~~-~~~~~~--~~~~~~~~~~~ 411 (445)
+++.. .+ +.. +.+++..++..
T Consensus 126 ~G~~~~~~-G~~~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 126 EGKQLARM-GFEPGGGAAYVSKVKS 149 (154)
T ss_dssp TCCEEEEE-CCCTTCHHHHHHHHHH
T ss_pred CCCEEEEe-cCCCCCHHHHHHHHHH
Confidence 66533 34 444 45555554443
No 409
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=96.12 E-value=0.055 Score=45.69 Aligned_cols=81 Identities=15% Similarity=0.123 Sum_probs=52.7
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhcc-ceEEEEeecCCChHHHHHc--------------------------
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHER-LNFYDTEVHDVSDPAVKKL-------------------------- 376 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~-~~f~~~~v~~~~~~l~~~f-------------------------- 376 (445)
..++++|.|...... .+.+..++..+.++ +.|+.+.+. .+.+.+++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVN-EQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYID 111 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECS-CCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTST
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC-CCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhc
Confidence 456788888754332 45677777778765 667555544 445566666
Q ss_pred -CCCCCCeEEEEccCCccc-ccccccChhhHHHHHH
Q 013319 377 -GVDALPAIVGWLSNGEKD-VLKTGISVKDQKSSIH 410 (445)
Q Consensus 377 -~V~~~Ptlv~~~~~~~~~-~~~~~~~~~~~~~~~~ 410 (445)
+|..+|+++++.+++... .+.+..+.+++.+.+.
T Consensus 112 ~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 147 (165)
T 3or5_A 112 GGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVK 147 (165)
T ss_dssp TCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHH
T ss_pred cCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHH
Confidence 899999999888877653 4555556656644444
No 410
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.11 E-value=0.0054 Score=50.85 Aligned_cols=66 Identities=9% Similarity=0.049 Sum_probs=41.9
Q ss_pred hhhHHHHhhcCCcEEEEEEECCCCccCCChhHHHHHHHHhc-CccEEEEEeCccc-------hhhHhHhCCccCCCcEEE
Q 013319 206 LQVFKKEIVEKGMTWLLFFYSPSSNRDGYESVIEEVANSME-GALKVGSINCETE-------ASLCKELGVHRPRSPRIF 277 (445)
Q Consensus 206 ~~~f~~~v~~~~~~~lV~Fyap~C~~C~~~p~~~~~a~~l~-~~v~~~~Vdc~~~-------~~lc~~~~I~~~~~Pti~ 277 (445)
.+.+++.+.. .. ++.|+++||++|+.+ +..+...+. ..+.+-.||++.+ ..+.+.+|+..+ |+|+
T Consensus 27 ~~~v~~~i~~-~~--Vvvy~~~~Cp~C~~a--~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tV--P~vf 99 (129)
T 3ctg_A 27 VAHVKDLIGQ-KE--VFVAAKTYCPYCKAT--LSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQKTV--PNVY 99 (129)
T ss_dssp HHHHHHHHHH-SS--EEEEECTTCHHHHHH--HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSS--CEEE
T ss_pred HHHHHHHHcC-CC--EEEEECCCCCchHHH--HHHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCCC--CEEE
Confidence 4456555543 32 688999999999864 112222222 1266777777754 357788999999 9975
Q ss_pred E
Q 013319 278 A 278 (445)
Q Consensus 278 ~ 278 (445)
+
T Consensus 100 i 100 (129)
T 3ctg_A 100 I 100 (129)
T ss_dssp E
T ss_pred E
Confidence 4
No 411
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.10 E-value=0.027 Score=41.14 Aligned_cols=57 Identities=18% Similarity=0.139 Sum_probs=40.3
Q ss_pred hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCccccccccc-ChhhHHHH
Q 013319 344 PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGI-SVKDQKSS 408 (445)
Q Consensus 344 ~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~-~~~~~~~~ 408 (445)
.+.+.+++..+...+.++.+ + +.+++++|+|.++||+++ +++. +..+.. +.++++++
T Consensus 18 ~~~l~~~~~~~~~~~~~~~v--~--~~~~~~~~~v~~~Pt~~~---~G~~-~~~G~~~~~~~l~~~ 75 (77)
T 1ilo_A 18 EKNAREAVKELGIDAEFEKI--K--EMDQILEAGLTALPGLAV---DGEL-KIMGRVASKEEIKKI 75 (77)
T ss_dssp HHHHHHHHHHTTCCEEEEEE--C--SHHHHHHHTCSSSSCEEE---TTEE-EECSSCCCHHHHHHH
T ss_pred HHHHHHHHHHcCCceEEEEe--c--CHHHHHHCCCCcCCEEEE---CCEE-EEcCCCCCHHHHHHH
Confidence 56688888888877777554 3 689999999999999996 5543 233444 55666443
No 412
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=96.09 E-value=0.069 Score=44.47 Aligned_cols=82 Identities=10% Similarity=0.016 Sum_probs=51.7
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhcc-ceEEEEee----------------------cCCChHHHHHcCCCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHER-LNFYDTEV----------------------HDVSDPAVKKLGVDA 380 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~-~~f~~~~v----------------------~~~~~~l~~~f~V~~ 380 (445)
..++++|.|...... .+.+..++..+.++ +.|+.+.+ .+.+..+++.|+|..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 456777777654322 34566777777654 55543331 124678999999999
Q ss_pred CCeEEEEccCCcc-cccccccChhhHHHHHH
Q 013319 381 LPAIVGWLSNGEK-DVLKTGISVKDQKSSIH 410 (445)
Q Consensus 381 ~Ptlv~~~~~~~~-~~~~~~~~~~~~~~~~~ 410 (445)
+|+++++.+++.. ..+.+..+.+++.+.+.
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 137 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKLYQEID 137 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHHHHHHH
Confidence 9999988776654 34555556655544443
No 413
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=96.08 E-value=0.056 Score=45.23 Aligned_cols=65 Identities=6% Similarity=0.041 Sum_probs=45.3
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhcc-ceEEEEeecCC------------------------ChHHHHHcCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHER-LNFYDTEVHDV------------------------SDPAVKKLGV 378 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~-~~f~~~~v~~~------------------------~~~l~~~f~V 378 (445)
..++++|.|...... .+.+..++..+.++ +.|+.+.+..+ +..+++.|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 456778888754332 35567777777764 66765555432 4678999999
Q ss_pred CCCCeEEEEccCCcc
Q 013319 379 DALPAIVGWLSNGEK 393 (445)
Q Consensus 379 ~~~Ptlv~~~~~~~~ 393 (445)
..+|+++++.+++..
T Consensus 108 ~~~P~~~lid~~G~i 122 (152)
T 2lrn_A 108 VGFPHIILVDPEGKI 122 (152)
T ss_dssp CSSCEEEEECTTSEE
T ss_pred CcCCeEEEECCCCeE
Confidence 999999988777654
No 414
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=96.06 E-value=0.025 Score=46.55 Aligned_cols=80 Identities=9% Similarity=0.048 Sum_probs=55.2
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhh-ccceEEEEeecC------------------------CChHHHHHcCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYH-ERLNFYDTEVHD------------------------VSDPAVKKLGV 378 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~-~~~~f~~~~v~~------------------------~~~~l~~~f~V 378 (445)
..++++|.|...... .+.+..++..+. ..+.|+.+.+.. .+..++++|+|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 567888888754332 456777777776 457776665542 25689999999
Q ss_pred CCCCeEEEEccCCcc-cccccccChhhHHHH
Q 013319 379 DALPAIVGWLSNGEK-DVLKTGISVKDQKSS 408 (445)
Q Consensus 379 ~~~Ptlv~~~~~~~~-~~~~~~~~~~~~~~~ 408 (445)
..+|+++++.+++.. ..+.+..+.+++.+.
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 143 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMTAEQLKEW 143 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCCHHHHHHH
T ss_pred CccCeEEEEcCCCcEEEEEcCCcCHHHHHHh
Confidence 999999989777764 355566666666544
No 415
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.06 E-value=0.016 Score=46.64 Aligned_cols=75 Identities=12% Similarity=-0.023 Sum_probs=50.9
Q ss_pred CCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCCh----HHHHHcCCCC-CCeEEEEccCCccc-cccc
Q 013319 330 RLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSD----PAVKKLGVDA-LPAIVGWLSNGEKD-VLKT 398 (445)
Q Consensus 330 ~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~----~l~~~f~V~~-~Ptlv~~~~~~~~~-~~~~ 398 (445)
+.|++|+|...... .+.+.+++.. .++.|+.+.|.. +. +++.+|+|++ .|++++|++++..- .-..
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde-~r~~Sn~IA~~~~V~h~sPq~il~k~G~~v~~~SH~ 100 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQ-ERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHG 100 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGG-GHHHHHHHHHHHTCCCCSSEEEEEETTEEEEEEEGG
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeec-CchhhHHHHHHhCCccCCCeEEEEECCEEEEEeecc
Confidence 66888888765432 5677777764 678888887764 33 4899999995 99999887655322 2344
Q ss_pred ccChhhHHH
Q 013319 399 GISVKDQKS 407 (445)
Q Consensus 399 ~~~~~~~~~ 407 (445)
.++..++..
T Consensus 101 ~I~~~~l~~ 109 (112)
T 3iv4_A 101 DINVSSLAQ 109 (112)
T ss_dssp GCSHHHHHH
T ss_pred ccCHHHHHH
Confidence 566655543
No 416
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=96.06 E-value=0.058 Score=44.90 Aligned_cols=81 Identities=9% Similarity=0.001 Sum_probs=51.1
Q ss_pred CCCCEEEEEecCCC-----ChHHHHHHHHHhhcc-ceEEEEeecCC----------------------ChHHHHHcCCCC
Q 013319 329 ARLPSVLLLSTKKE-----TPIIWRVLSGMYHER-LNFYDTEVHDV----------------------SDPAVKKLGVDA 380 (445)
Q Consensus 329 ~~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~-~~f~~~~v~~~----------------------~~~l~~~f~V~~ 380 (445)
..++++|.|..... ..+.+..++..+.++ +.|+.+.+... +..+++.|+|..
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 35677787765432 245677777777653 66655554432 127899999999
Q ss_pred CCeEEEEccCCccc-ccccccChhhHHHHH
Q 013319 381 LPAIVGWLSNGEKD-VLKTGISVKDQKSSI 409 (445)
Q Consensus 381 ~Ptlv~~~~~~~~~-~~~~~~~~~~~~~~~ 409 (445)
+|+++++.+++... .+.+..+.+++.+.+
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 138 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPKTAEKF 138 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHHHHHHH
T ss_pred CCEEEEECCCCeEEEccCCCCCHHHHHHHH
Confidence 99999888777644 333334444543333
No 417
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.02 E-value=0.052 Score=45.87 Aligned_cols=114 Identities=8% Similarity=0.097 Sum_probs=66.6
Q ss_pred ceeccccccchhhhccCCCCEEEE-EecCCC-----ChHHHHHHHHHhhccceEEEEeecC-CChHHHHHcCCCC--CCe
Q 013319 313 SKRISLNRIEFTFDAKARLPSVLL-LSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHD-VSDPAVKKLGVDA--LPA 383 (445)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~vvl-F~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~-~~~~l~~~f~V~~--~Pt 383 (445)
+..++.++.... .....+.+++ |..... ....++.+|..|++++.|+.+.... ....+.+.||++. +|+
T Consensus 16 V~e~t~en~~~~--~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~ 93 (147)
T 3bj5_A 16 VIEFTEQTAPKI--FGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECPA 93 (147)
T ss_dssp EEECCTTTHHHH--HSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSE
T ss_pred eEEeccccHHHH--hcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCCE
Confidence 444444443322 2334455544 554322 2577899999999999997776421 3346889999996 899
Q ss_pred EEEEccCCcccccc---cccChhhHHHHHHHHHhhhhhhhhcccccccCCCccchhcc
Q 013319 384 IVGWLSNGEKDVLK---TGISVKDQKSSIHELSKLLDGLKKRTKRQLPHGLANHIVIQ 438 (445)
Q Consensus 384 lv~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~l~~~~~~~ 438 (445)
|+++..+++...|. +.++.+. +++++++|+.- .+.|.+.|+++|+
T Consensus 94 v~i~~~~~~~~Ky~~~~~~~t~~~-------i~~Fv~d~l~G---kL~p~~KSEpiPe 141 (147)
T 3bj5_A 94 VRLITLEEEMTKYKPESEELTAER-------ITEFCHRFLEG---KIKPHLMSQELPE 141 (147)
T ss_dssp EEEEECSSSCEEECCSCCCCCHHH-------HHHHHHHHHTT---CSCEEECCSCCCG
T ss_pred EEEEecccccccCCCCcccCCHHH-------HHHHHHHHHcC---CccccccCCCCCC
Confidence 98776422222232 3445544 45555555532 3556666766664
No 418
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.02 E-value=0.0011 Score=58.90 Aligned_cols=41 Identities=5% Similarity=0.006 Sum_probs=35.4
Q ss_pred cEEEEEEECCCCccCCC-hhHH---HHHHHHhcCccEEEEEeCcc
Q 013319 218 MTWLLFFYSPSSNRDGY-ESVI---EEVANSMEGALKVGSINCET 258 (445)
Q Consensus 218 ~~~lV~Fyap~C~~C~~-~p~~---~~~a~~l~~~v~~~~Vdc~~ 258 (445)
.+.+|+|++.||+||+. .|.+ +++++.+.+.|+|..++..-
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 59 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSL 59 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSS
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechh
Confidence 46899999999999999 8876 68888887789999998765
No 419
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=95.97 E-value=0.034 Score=44.96 Aligned_cols=83 Identities=10% Similarity=-0.056 Sum_probs=52.9
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEee---------------------------cCCChHHHHHc
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEV---------------------------HDVSDPAVKKL 376 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v---------------------------~~~~~~l~~~f 376 (445)
.+++++|.|...... .+.+.+++..+...+.++.+.. .+.+..++++|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 456778878754332 3455666666665666644411 12356799999
Q ss_pred CCCCCCeEEEEccCCcc-cccccccChhhHHHHHHH
Q 013319 377 GVDALPAIVGWLSNGEK-DVLKTGISVKDQKSSIHE 411 (445)
Q Consensus 377 ~V~~~Ptlv~~~~~~~~-~~~~~~~~~~~~~~~~~~ 411 (445)
+|..+|+++++.+++.. ..+.+..+.+++.+.++.
T Consensus 101 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 GVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred CcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 99999999999777764 345555666666555543
No 420
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=95.93 E-value=0.032 Score=50.73 Aligned_cols=84 Identities=12% Similarity=0.108 Sum_probs=53.9
Q ss_pred CcEEEEEEECCC-CccCC-----C-hhHHHHHHHHhcCccEEEEEeCccc-----------------------hhhHhHh
Q 013319 217 GMTWLLFFYSPS-SNRDG-----Y-ESVIEEVANSMEGALKVGSINCETE-----------------------ASLCKEL 266 (445)
Q Consensus 217 ~~~~lV~Fyap~-C~~C~-----~-~p~~~~~a~~l~~~v~~~~Vdc~~~-----------------------~~lc~~~ 266 (445)
++++||.||..| |+.|. . .+.+.++ + ..+.|..|+++.. ..+++.|
T Consensus 48 Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~-~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~vak~y 123 (224)
T 3keb_A 48 HTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W-PHLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFHKRY 123 (224)
T ss_dssp TCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C-TTSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHHHHT
T ss_pred CCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c-CCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHHHHh
Confidence 457899999888 99999 7 7777766 4 4578888887642 2466677
Q ss_pred CCccC-------CCcEEEEeccCCCCCCCeee------ecCcccHHHHHHHHHhh
Q 013319 267 GVHRP-------RSPRIFAYSYKAGDKGSLVE------YNEHLVAKNLKSFCRDH 308 (445)
Q Consensus 267 ~I~~~-------~~Pti~~f~~~~~~~g~~~~------y~g~~~~~~l~~fi~~~ 308 (445)
||..- ..|+.+++. .+|.+.. +.+..+.+++.+.+...
T Consensus 124 Gv~~~~~~~~G~~~p~tfvID----~dG~I~~~~~~~~~~~~pd~~evl~~L~~l 174 (224)
T 3keb_A 124 GVLITEYPLSGYTSPAIILAD----AANVVHYSERLANTRDFFDFDAIEKLLQEG 174 (224)
T ss_dssp TCBCCSTTSTTCBCCEEEEEC----TTCBEEEEEECSBTTCCCCHHHHHHHHHHH
T ss_pred CCccccccccCCccCEEEEEc----CCCEEEEEEecCCCCCCCCHHHHHHHHHHh
Confidence 77541 138888872 3454332 12334567777766543
No 421
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=95.85 E-value=0.089 Score=43.72 Aligned_cols=66 Identities=11% Similarity=0.039 Sum_probs=45.2
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhcc-ceEEEEeecCCC---------------------hHHHHHcCCCCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHER-LNFYDTEVHDVS---------------------DPAVKKLGVDAL 381 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~-~~f~~~~v~~~~---------------------~~l~~~f~V~~~ 381 (445)
.+++++|.|...... .+.+..++..+.++ +.++.+.+.... ..+++.|+|..+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 456778878754432 45577777778765 666555544321 168889999999
Q ss_pred CeEEEEccCCccc
Q 013319 382 PAIVGWLSNGEKD 394 (445)
Q Consensus 382 Ptlv~~~~~~~~~ 394 (445)
|+++++.+++...
T Consensus 107 P~~~lid~~G~i~ 119 (152)
T 3gl3_A 107 PTSFLIDRNGKVL 119 (152)
T ss_dssp SEEEEECTTSBEE
T ss_pred CeEEEECCCCCEE
Confidence 9999887777644
No 422
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=95.78 E-value=0.059 Score=44.42 Aligned_cols=65 Identities=12% Similarity=0.082 Sum_probs=45.3
Q ss_pred CCCCEEEEEecCCC--C---hHHHHHHHHHh-hcc-ceEEEEeecCC------------------------ChHHHHHcC
Q 013319 329 ARLPSVLLLSTKKE--T---PIIWRVLSGMY-HER-LNFYDTEVHDV------------------------SDPAVKKLG 377 (445)
Q Consensus 329 ~~~~~vvlF~~~~~--~---~~~~~~lA~~~-~~~-~~f~~~~v~~~------------------------~~~l~~~f~ 377 (445)
.+++++|.|..... + .+.+..++..+ .++ +.|+.+.++.. +..+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 45677887764322 2 46677788888 554 66765555432 347899999
Q ss_pred CCCCCeEEEEccCCcc
Q 013319 378 VDALPAIVGWLSNGEK 393 (445)
Q Consensus 378 V~~~Ptlv~~~~~~~~ 393 (445)
|..+|+++++.+++..
T Consensus 112 v~~~P~~~lid~~G~i 127 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKI 127 (148)
T ss_dssp CCSSSEEEEECTTSBE
T ss_pred CCCcCEEEEECCCCeE
Confidence 9999999988777654
No 423
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=95.70 E-value=0.042 Score=45.67 Aligned_cols=65 Identities=12% Similarity=0.158 Sum_probs=46.0
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhh--ccceEEEEeecCC-----------------------ChHHHHHcCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYH--ERLNFYDTEVHDV-----------------------SDPAVKKLGV 378 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~--~~~~f~~~~v~~~-----------------------~~~l~~~f~V 378 (445)
..++++|.|...... .+.+..++.++. ..+.++.+.++.+ +..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 456788888765432 456778888887 4566766655532 2478999999
Q ss_pred CCCCeEEEEc-cCCcc
Q 013319 379 DALPAIVGWL-SNGEK 393 (445)
Q Consensus 379 ~~~Ptlv~~~-~~~~~ 393 (445)
..+|+++++. ++++.
T Consensus 107 ~~~Pt~~lid~~~G~i 122 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDV 122 (146)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCeE
Confidence 9999999887 66653
No 424
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=95.70 E-value=0.013 Score=47.48 Aligned_cols=83 Identities=11% Similarity=-0.065 Sum_probs=53.7
Q ss_pred CCEEEEEecCCCC--hHHHHHHHHHhhcc-----ceEEEEeecC-CChHHHHHcCCCCCCeEEEEccCCcccccccccCh
Q 013319 331 LPSVLLLSTKKET--PIIWRVLSGMYHER-----LNFYDTEVHD-VSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISV 402 (445)
Q Consensus 331 ~~~vvlF~~~~~~--~~~~~~lA~~~~~~-----~~f~~~~v~~-~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~ 402 (445)
...+|.|+...-. ..+-..++..+... +.+..+.++. ....++.+++|.+.||+++|..+++..-+.+-...
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~~~ 98 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYPGE 98 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCCCH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCCCH
Confidence 3567777765432 22223344445443 5565566665 34678999999999999999855566667777777
Q ss_pred hhHHHHHHHHH
Q 013319 403 KDQKSSIHELS 413 (445)
Q Consensus 403 ~~~~~~~~~~~ 413 (445)
+++..++..+.
T Consensus 99 ~~f~~~L~~~l 109 (116)
T 3dml_A 99 DFFWPMLARLI 109 (116)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77766665543
No 425
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=95.60 E-value=0.09 Score=44.54 Aligned_cols=81 Identities=14% Similarity=0.083 Sum_probs=54.0
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecC-----------------CC-----------------
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHD-----------------VS----------------- 369 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~-----------------~~----------------- 369 (445)
..++++|.|...... .+.+..++..+. .+.|+.+.+.. .+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 456788878754332 456777777777 67776665441 12
Q ss_pred -----hHHHHHcCCCCCCeEEEEccCCccccccccc-ChhhHHHHHHH
Q 013319 370 -----DPAVKKLGVDALPAIVGWLSNGEKDVLKTGI-SVKDQKSSIHE 411 (445)
Q Consensus 370 -----~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~-~~~~~~~~~~~ 411 (445)
..+++.|+|..+|+++++.+++.... .+.. +.+++.+.+..
T Consensus 115 ~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~ 161 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTTPSLGELESVIKS 161 (165)
T ss_dssp EEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEESCCHHHHHHHHHH
T ss_pred EEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHH
Confidence 37899999999999999988877655 4445 55666555443
No 426
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=95.56 E-value=0.065 Score=44.17 Aligned_cols=65 Identities=12% Similarity=0.131 Sum_probs=45.3
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhh--ccceEEEEeecCC-----------------------ChHHHHHcCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYH--ERLNFYDTEVHDV-----------------------SDPAVKKLGV 378 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~--~~~~f~~~~v~~~-----------------------~~~l~~~f~V 378 (445)
.+++++|.|...... .+.+.+++..+. ..+.++.+.++.+ +..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 456788888764432 456777777776 4566666655532 2468999999
Q ss_pred CCCCeEEEEc-cCCcc
Q 013319 379 DALPAIVGWL-SNGEK 393 (445)
Q Consensus 379 ~~~Ptlv~~~-~~~~~ 393 (445)
..+|+++++. +++..
T Consensus 107 ~~~Pt~~lid~~~G~i 122 (144)
T 1o73_A 107 ESIPTLITINADTGAI 122 (144)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCeE
Confidence 9999999888 56654
No 427
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=95.48 E-value=0.061 Score=46.84 Aligned_cols=68 Identities=10% Similarity=0.056 Sum_probs=45.7
Q ss_pred hhccCCCCEEEEEecCCCC------hHHH--HHHHHHhhccceEEEEeecCCChHHHHHc--------CCCCCCeEEEEc
Q 013319 325 FDAKARLPSVLLLSTKKET------PIIW--RVLSGMYHERLNFYDTEVHDVSDPAVKKL--------GVDALPAIVGWL 388 (445)
Q Consensus 325 ~~~~~~~~~vvlF~~~~~~------~~~~--~~lA~~~~~~~~f~~~~v~~~~~~l~~~f--------~V~~~Ptlv~~~ 388 (445)
.....++|++|.|+..... +..| .+++..+.+.+.++.+.+. ..+++.+.| +|.++|+++++.
T Consensus 34 ~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~d-e~~~l~~~y~~~~q~~~gv~g~Pt~v~l~ 112 (173)
T 3ira_A 34 KARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDRE-ERPDIDNIYMTVCQIILGRGGWPLNIIMT 112 (173)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETT-TCHHHHHHHHHHHHHHHSCCCSSEEEEEC
T ss_pred HHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCc-ccCcHHHHHHHHHHHHcCCCCCcceeeEC
Confidence 3345678999999865432 1122 3556666665666554432 567888888 999999999888
Q ss_pred cCCcc
Q 013319 389 SNGEK 393 (445)
Q Consensus 389 ~~~~~ 393 (445)
++++.
T Consensus 113 ~dG~~ 117 (173)
T 3ira_A 113 PGKKP 117 (173)
T ss_dssp TTSCE
T ss_pred CCCCc
Confidence 77654
No 428
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=95.47 E-value=0.021 Score=52.73 Aligned_cols=60 Identities=13% Similarity=0.164 Sum_probs=45.3
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNG 391 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~ 391 (445)
..++++|.|+..+.. .+.|..||..|.+ +.|+.+.+. ...++.+|+|..+||+++|..+.
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d--~~~l~~~~~I~~~PTll~~~~G~ 196 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKAS--NTGAGDRFSSDVLPTLLVYKGGE 196 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHH--HHCCTTSSCTTTCSEEEEEETTE
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCC--cHHHHHHCCCCCCCEEEEEECCE
Confidence 467788888766542 5789999999875 888666543 26688899999999999887443
No 429
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=95.47 E-value=0.0035 Score=55.34 Aligned_cols=39 Identities=13% Similarity=0.226 Sum_probs=33.9
Q ss_pred CcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE 257 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~ 257 (445)
+.+.||+|++.||+||+. .|.++++.+++ .+.|..+...
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCeEEEEecc
Confidence 457899999999999999 99999999998 4677777765
No 430
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=95.46 E-value=0.069 Score=45.84 Aligned_cols=84 Identities=13% Similarity=0.054 Sum_probs=53.1
Q ss_pred cCCCCEEEEEecCCCCh-HHH-------HHHHHHhhccceEEEEeecCCChHH--------------------------H
Q 013319 328 KARLPSVLLLSTKKETP-IIW-------RVLSGMYHERLNFYDTEVHDVSDPA--------------------------V 373 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~~-~~~-------~~lA~~~~~~~~f~~~~v~~~~~~l--------------------------~ 373 (445)
..+++++|.|+..+..+ ... ..+...+.+.+.|+.+++.. +..+ +
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDN-KTPLTEPVKIMENGTERTLRTVGDKWSYLQR 123 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTC-CCEEEEEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCc-ccccchhhhhhhcchhhhhhhhhhhhhHHHH
Confidence 55788999898765421 111 55555566567775555442 2222 7
Q ss_pred HHcCCCCCCeEEEEccCCc-ccccccccC-hhhHHHHHHHH
Q 013319 374 KKLGVDALPAIVGWLSNGE-KDVLKTGIS-VKDQKSSIHEL 412 (445)
Q Consensus 374 ~~f~V~~~Ptlv~~~~~~~-~~~~~~~~~-~~~~~~~~~~~ 412 (445)
++|+|.++||++++.++++ ...+.+..+ .+++..++...
T Consensus 124 ~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 124 VKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp HHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHH
T ss_pred HHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHH
Confidence 8999999999999977664 334556566 67775555443
No 431
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=95.45 E-value=0.05 Score=44.99 Aligned_cols=65 Identities=11% Similarity=0.058 Sum_probs=45.8
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhh--ccceEEEEeecCC-----------------------ChHHHHHcCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYH--ERLNFYDTEVHDV-----------------------SDPAVKKLGV 378 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~--~~~~f~~~~v~~~-----------------------~~~l~~~f~V 378 (445)
..++++|.|...... .+.+..++..+. ..+.++.+.++.+ +..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 456788888765432 456777888887 3666766655532 2578999999
Q ss_pred CCCCeEEEEc-cCCcc
Q 013319 379 DALPAIVGWL-SNGEK 393 (445)
Q Consensus 379 ~~~Ptlv~~~-~~~~~ 393 (445)
..+|+++++. +++..
T Consensus 107 ~~~P~~~lid~~~G~i 122 (144)
T 1i5g_A 107 KSIPTLVGVEADSGNI 122 (144)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCcE
Confidence 9999999887 66654
No 432
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=95.41 E-value=0.024 Score=48.69 Aligned_cols=85 Identities=13% Similarity=0.177 Sum_probs=52.0
Q ss_pred cCCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcCC--CCCCeEEEEccCCc-ccccccc
Q 013319 328 KARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGV--DALPAIVGWLSNGE-KDVLKTG 399 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V--~~~Ptlv~~~~~~~-~~~~~~~ 399 (445)
..+++++|.|+..+.. .+.+..++..+...+.|+.+.+......++.+|++ ..+||++++..+++ ...+.+.
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINE 123 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCT
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCC
Confidence 4567889988875532 34566666555555667666655432227888998 55999998855554 3334332
Q ss_pred ----------cChhhHHHHHHHH
Q 013319 400 ----------ISVKDQKSSIHEL 412 (445)
Q Consensus 400 ----------~~~~~~~~~~~~~ 412 (445)
.+.++++..+..+
T Consensus 124 ~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 124 NGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp TSCTTSTTCCCSHHHHHHHHHHH
T ss_pred CCccchhcccCCHHHHHHHHHHH
Confidence 4456665555544
No 433
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=95.40 E-value=0.11 Score=43.29 Aligned_cols=84 Identities=11% Similarity=0.003 Sum_probs=53.4
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhh-ccceEEEEeecC-----------------------CChHHHHHcC--
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYH-ERLNFYDTEVHD-----------------------VSDPAVKKLG-- 377 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~-~~~~f~~~~v~~-----------------------~~~~l~~~f~-- 377 (445)
..++++|.|+..... .+.+..++..++ ..+.|+.+.++. ....+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 456778888755432 345666666663 345665555431 2356788899
Q ss_pred CCCCCeEEEEccCCcc-cccccccChhhHHHHHHHH
Q 013319 378 VDALPAIVGWLSNGEK-DVLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 378 V~~~Ptlv~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 412 (445)
|..+|+++++.+++.. ..+.+..+.+++.+.++.+
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 9999999989887754 4566666666665555443
No 434
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=95.36 E-value=0.19 Score=41.77 Aligned_cols=81 Identities=11% Similarity=0.135 Sum_probs=50.1
Q ss_pred CCCCEEEEEecCCCCh-------HHHHHHHHHh-hcc-ceEEEEeecCC------------------------ChHHHHH
Q 013319 329 ARLPSVLLLSTKKETP-------IIWRVLSGMY-HER-LNFYDTEVHDV------------------------SDPAVKK 375 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~~-------~~~~~lA~~~-~~~-~~f~~~~v~~~------------------------~~~l~~~ 375 (445)
..++++|.|......+ +.+..+...| +++ +.|+.++++.. +..+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3567788776543322 3466666677 444 66655555432 2378999
Q ss_pred cCCCCCCeEEEEccCCcccccccccChhhHHHHHHH
Q 013319 376 LGVDALPAIVGWLSNGEKDVLKTGISVKDQKSSIHE 411 (445)
Q Consensus 376 f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (445)
|+|..+|+++++.+++...... .+.+++...++.
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~ 145 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKN--LRGEELKKKIEN 145 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEES--CCHHHHHHHHHH
T ss_pred cCCCccCeEEEECCCCEEEEcc--CCHHHHHHHHHH
Confidence 9999999999888877643221 244555444443
No 435
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=95.29 E-value=0.098 Score=44.03 Aligned_cols=71 Identities=11% Similarity=0.032 Sum_probs=47.5
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhh-ccceEEEEeecC------------------CChHHHHHcCCCCCCeE
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYH-ERLNFYDTEVHD------------------VSDPAVKKLGVDALPAI 384 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~-~~~~f~~~~v~~------------------~~~~l~~~f~V~~~Ptl 384 (445)
..++++|.|...... .+.+..++..+. ..+.|+.+.+.. .+..+++.|+|..+|++
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 119 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDT 119 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceE
Confidence 456788888754332 345777777776 445665554432 14689999999999999
Q ss_pred EEEccCCccc-ccccc
Q 013319 385 VGWLSNGEKD-VLKTG 399 (445)
Q Consensus 385 v~~~~~~~~~-~~~~~ 399 (445)
+++.+++... .+.+.
T Consensus 120 ~lid~~G~i~~~~~G~ 135 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGG 135 (158)
T ss_dssp EEECTTSBEEEEEESC
T ss_pred EEEcCCCCEEEEEeCC
Confidence 9888877644 44444
No 436
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=95.28 E-value=0.18 Score=43.49 Aligned_cols=84 Identities=11% Similarity=0.047 Sum_probs=54.6
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhcc-c------eEEEEeecCCChHHHHHc--------------------
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHER-L------NFYDTEVHDVSDPAVKKL-------------------- 376 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~-~------~f~~~~v~~~~~~l~~~f-------------------- 376 (445)
..++++|.|+..... .+.+..++..|.++ + .|+.+.+...+.+.+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 456788888754332 45677777888765 6 776565543246666666
Q ss_pred -----CCCCCCeEEEEccCCccc-ccccccChhhHHHHHHHH
Q 013319 377 -----GVDALPAIVGWLSNGEKD-VLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 377 -----~V~~~Ptlv~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 412 (445)
+|..+|+++++.+++... .+.+..+.+++...+..+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPL 179 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 788899988888877643 455656667776665544
No 437
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=95.20 E-value=0.045 Score=46.89 Aligned_cols=65 Identities=12% Similarity=0.210 Sum_probs=46.6
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhc--cceEEEEeecCCC-----------------------hHHHHHcCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHE--RLNFYDTEVHDVS-----------------------DPAVKKLGV 378 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~--~~~f~~~~v~~~~-----------------------~~l~~~f~V 378 (445)
..++++|.|...... .+.+.+++.+|++ .+.++.+.++... ..+++.|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 456788888755432 4567888888875 5666666555331 578999999
Q ss_pred CCCCeEEEEccC-Ccc
Q 013319 379 DALPAIVGWLSN-GEK 393 (445)
Q Consensus 379 ~~~Ptlv~~~~~-~~~ 393 (445)
..+|+++++.++ ++.
T Consensus 127 ~~~Pt~~lid~~~G~i 142 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDT 142 (165)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEeCCCCEE
Confidence 999999988876 654
No 438
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.14 E-value=0.048 Score=43.49 Aligned_cols=73 Identities=7% Similarity=0.021 Sum_probs=47.1
Q ss_pred CCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhhH
Q 013319 331 LPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQ 405 (445)
Q Consensus 331 ~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~ 405 (445)
.+.+++|+...- ..+.+.+++.++. +.|..+++. .+++++.+|++. +|+|+++..++. ++.+..+.++|
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId-~d~~l~~~ygv~-VP~l~~~~dG~~--v~~g~~~~~~L 102 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINID-GNEHLTRLYNDR-VPVLFAVNEDKE--LCHYFLDSDVI 102 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETT-TCHHHHHHSTTS-CSEEEETTTTEE--EECSSCCCHHH
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECC-CCHHHHHHhCCC-CceEEEEECCEE--EEecCCCHHHH
Confidence 355777776543 2456666666654 666556555 578999999997 999986654432 23455666666
Q ss_pred HHHH
Q 013319 406 KSSI 409 (445)
Q Consensus 406 ~~~~ 409 (445)
++++
T Consensus 103 ~~~L 106 (107)
T 2fgx_A 103 GAYL 106 (107)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
No 439
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=95.13 E-value=0.072 Score=44.46 Aligned_cols=78 Identities=12% Similarity=0.027 Sum_probs=52.0
Q ss_pred CCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeec--------------------------CCChHHHHHcCCC
Q 013319 331 LPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVH--------------------------DVSDPAVKKLGVD 379 (445)
Q Consensus 331 ~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~--------------------------~~~~~l~~~f~V~ 379 (445)
++++|.|...... .+.+..++..+ .+.|+.+.+. ..+..+++.|+|.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 6888888754432 35567777777 5677656551 1457789999999
Q ss_pred CCCeEEEEccCCccc-ccccccChhhHHHHHH
Q 013319 380 ALPAIVGWLSNGEKD-VLKTGISVKDQKSSIH 410 (445)
Q Consensus 380 ~~Ptlv~~~~~~~~~-~~~~~~~~~~~~~~~~ 410 (445)
.+|+++++.+++... .+.+..+.+++.+.++
T Consensus 109 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 140 (154)
T 3ia1_A 109 GQPWTFVVDREGKVVALFAGRAGREALLDALL 140 (154)
T ss_dssp SSCEEEEECTTSEEEEEEESBCCHHHHHHHHH
T ss_pred cccEEEEECCCCCEEEEEcCCCCHHHHHHHHH
Confidence 999999888877643 4555556655544443
No 440
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=95.06 E-value=0.14 Score=42.83 Aligned_cols=82 Identities=12% Similarity=-0.008 Sum_probs=51.5
Q ss_pred CCCEEEEEecCCC-----C-hHHHHHHHHHhhcc-ceEEEEee---------------------------cCCChH----
Q 013319 330 RLPSVLLLSTKKE-----T-PIIWRVLSGMYHER-LNFYDTEV---------------------------HDVSDP---- 371 (445)
Q Consensus 330 ~~~~vvlF~~~~~-----~-~~~~~~lA~~~~~~-~~f~~~~v---------------------------~~~~~~---- 371 (445)
.++++|.|..... . .+.+.+++..|.++ +.|+.+.+ .+.+..
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRI 109 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSS
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchh
Confidence 5677777765432 1 34566666777654 66654443 122333
Q ss_pred --HHHHcCCCCCCeEEEEccCCccc-ccccccChhhHHHHHHH
Q 013319 372 --AVKKLGVDALPAIVGWLSNGEKD-VLKTGISVKDQKSSIHE 411 (445)
Q Consensus 372 --l~~~f~V~~~Ptlv~~~~~~~~~-~~~~~~~~~~~~~~~~~ 411 (445)
+++.|+|..+|+++++.+++... .+.+..+.+++.+.+..
T Consensus 110 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 152 (160)
T 3lor_A 110 PSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGS 152 (160)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHH
T ss_pred hhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHH
Confidence 89999999999999888877643 44555666666555443
No 441
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=94.99 E-value=0.029 Score=50.70 Aligned_cols=86 Identities=17% Similarity=0.131 Sum_probs=59.4
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc----------------------------hhhHhH
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE----------------------------ASLCKE 265 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~----------------------------~~lc~~ 265 (445)
++++|+.|| +.||+.|.. .+.+.+...+++. .+.+..|+++.. .++++.
T Consensus 52 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~ 131 (216)
T 3sbc_A 52 GKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRD 131 (216)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHHH
Confidence 456788899 999999999 9999999999975 688888888742 357888
Q ss_pred hCCcc----CCCcEEEEeccCCCCCCCeee---ec--CcccHHHHHHHHH
Q 013319 266 LGVHR----PRSPRIFAYSYKAGDKGSLVE---YN--EHLVAKNLKSFCR 306 (445)
Q Consensus 266 ~~I~~----~~~Pti~~f~~~~~~~g~~~~---y~--g~~~~~~l~~fi~ 306 (445)
|||-. +..+.+++. .++|.+.. |. -.++.+++...|.
T Consensus 132 YGv~~~~~g~~~R~tFiI----D~~G~Ir~~~v~~~~~grn~dEiLr~l~ 177 (216)
T 3sbc_A 132 YGVLIEEEGVALRGLFII----DPKGVIRHITINDLPVGRNVDEALRLVE 177 (216)
T ss_dssp HTCEETTTTEECEEEEEE----CTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred cCCeeccCCceeeEEEEE----CCCCeEEEEEEcCCCCCCCHHHHHHHHH
Confidence 88741 211666666 23453221 22 2457777766665
No 442
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=94.98 E-value=0.15 Score=42.44 Aligned_cols=85 Identities=14% Similarity=0.044 Sum_probs=50.2
Q ss_pred CCCCEEEEEecCCCC--hHHHHHHHHHhh-ccceEEEEeec----------------------CCChHHHHHcCCCCCCe
Q 013319 329 ARLPSVLLLSTKKET--PIIWRVLSGMYH-ERLNFYDTEVH----------------------DVSDPAVKKLGVDALPA 383 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~--~~~~~~lA~~~~-~~~~f~~~~v~----------------------~~~~~l~~~f~V~~~Pt 383 (445)
..++++|.|+..... ......+..... +++.|+.+.+. +.+..+++.|+|..+|+
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 120 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPE 120 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTCTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCE
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCe
Confidence 356788888764332 222222222222 34666555432 23567899999999998
Q ss_pred EEEEccCCccc-ccccccChhhHHHHHHHHH
Q 013319 384 IVGWLSNGEKD-VLKTGISVKDQKSSIHELS 413 (445)
Q Consensus 384 lv~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 413 (445)
++++.+++... .+.+..+.+++...+..+.
T Consensus 121 ~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 121 TFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp EEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred EEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 88787776543 4555556666665555443
No 443
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=94.68 E-value=0.071 Score=45.29 Aligned_cols=92 Identities=10% Similarity=0.031 Sum_probs=53.3
Q ss_pred ccCCCCEEEEEecCCCC-----hHHHHHHHH--HhhccceEEEEeecCCChHHHHHcCCCCCCeEEEEccCCc-cccccc
Q 013319 327 AKARLPSVLLLSTKKET-----PIIWRVLSG--MYHERLNFYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGE-KDVLKT 398 (445)
Q Consensus 327 ~~~~~~~vvlF~~~~~~-----~~~~~~lA~--~~~~~~~f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~-~~~~~~ 398 (445)
...++|++|.|+..... .+.+...+. .+. ...|+.+.++..+.+++.+++|.++||++++.++++ ...+.+
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~-~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G 119 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMA-QNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRADIAG 119 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHH-HHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCTTCCC
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHh-hcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEEEEeC
Confidence 34578999999876542 222222111 111 134666666544456788999999999998886554 333333
Q ss_pred c-------cChhhHHHHHHHHHhhhhhh
Q 013319 399 G-------ISVKDQKSSIHELSKLLDGL 419 (445)
Q Consensus 399 ~-------~~~~~~~~~~~~~~~~l~~~ 419 (445)
. ....++.+.+..+++.+..+
T Consensus 120 ~~~~~~~~~~~~~~~~ll~~~~~al~~~ 147 (151)
T 3ph9_A 120 RYSNRLYTYEPRDLPLLIENMKKALRLI 147 (151)
T ss_dssp SCTTSTTCCCGGGHHHHHHHHHHHHSCC
T ss_pred CcCCcccccchhhHHHHHHHHHHHHHHH
Confidence 3 33455655566665555443
No 444
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=94.62 E-value=0.17 Score=42.05 Aligned_cols=71 Identities=7% Similarity=-0.065 Sum_probs=45.7
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhc-cceEEEEeecCC----------------------ChHHHHHcCCCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHE-RLNFYDTEVHDV----------------------SDPAVKKLGVDA 380 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~-~~~f~~~~v~~~----------------------~~~l~~~f~V~~ 380 (445)
.+++++|.|...... .+.+..++..+.+ .+.|+.+.+... +..+++.|+|..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 456778877754322 3456777777765 466655554432 134889999999
Q ss_pred CCeEEEEccCCccc-ccccc
Q 013319 381 LPAIVGWLSNGEKD-VLKTG 399 (445)
Q Consensus 381 ~Ptlv~~~~~~~~~-~~~~~ 399 (445)
+|+++++.+++... .+.+.
T Consensus 107 ~P~~~lid~~G~i~~~~~g~ 126 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGA 126 (154)
T ss_dssp BCEEEEECTTSBEEEEEESC
T ss_pred CCeEEEECCCCcEEEEEcCC
Confidence 99988888877643 34343
No 445
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=94.56 E-value=0.36 Score=41.49 Aligned_cols=85 Identities=13% Similarity=0.062 Sum_probs=51.2
Q ss_pred CCCCEEEEEecCCC--ChHHHHHHHHHhhccceEEEEee----------------------cCCChHHHHHcCCCCCCeE
Q 013319 329 ARLPSVLLLSTKKE--TPIIWRVLSGMYHERLNFYDTEV----------------------HDVSDPAVKKLGVDALPAI 384 (445)
Q Consensus 329 ~~~~~vvlF~~~~~--~~~~~~~lA~~~~~~~~f~~~~v----------------------~~~~~~l~~~f~V~~~Ptl 384 (445)
..++++|.|+.... +......+...+...+.|+.+.+ .+.+..+++.|+|..+|++
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 136 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQGVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAPET 136 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSCEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCCeE
Confidence 35678888875433 22233333333333466654443 2245678999999999999
Q ss_pred EEEccCCccc-ccccccChhhHHHHHHHHH
Q 013319 385 VGWLSNGEKD-VLKTGISVKDQKSSIHELS 413 (445)
Q Consensus 385 v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 413 (445)
+++.+++... .+.+..+.+++...+..+.
T Consensus 137 ~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 137 YLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp EEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred EEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 9888877644 4445566666655554443
No 446
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=94.52 E-value=0.073 Score=42.11 Aligned_cols=67 Identities=7% Similarity=0.050 Sum_probs=41.5
Q ss_pred CEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecC---CChHHHHHcCCCCCCeEEEEccCCcccccccccChh
Q 013319 332 PSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHD---VSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVK 403 (445)
Q Consensus 332 ~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~---~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~ 403 (445)
+.+|.|+..... .+.|..++..+ .++.+.+.. .+.+++++|+|.++||+++ ++. .|.+..+.+
T Consensus 14 ~~vV~F~A~WC~~C~~~~p~~~~~a~~~----~~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i---~G~--~~~G~~~~~ 84 (106)
T 3kp8_A 14 IGGTMYGAYWCPHCQDQKELFGAAFDQV----PYVECSPNGPGTPQAQECTEAGITSYPTWII---NGR--TYTGVRSLE 84 (106)
T ss_dssp HTCEEEECTTCHHHHHHHHHHGGGGGGS----CEEESCTTCTTSCCCHHHHHTTCCSSSEEEE---TTE--EEESCCCHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHhC----CEEEEecccccchhHHHHHHcCCeEeCEEEE---CCE--EecCCCCHH
Confidence 345666654432 45566555433 455554321 3678999999999999875 443 477777775
Q ss_pred hHHH
Q 013319 404 DQKS 407 (445)
Q Consensus 404 ~~~~ 407 (445)
++..
T Consensus 85 ~l~~ 88 (106)
T 3kp8_A 85 ALAV 88 (106)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5533
No 447
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=94.52 E-value=0.23 Score=43.25 Aligned_cols=81 Identities=10% Similarity=0.114 Sum_probs=51.6
Q ss_pred CEEEEEecCCCC-----hHHHHHHHHHhhcc-ceEEEEeec----------------------------CCChHHHHHcC
Q 013319 332 PSVLLLSTKKET-----PIIWRVLSGMYHER-LNFYDTEVH----------------------------DVSDPAVKKLG 377 (445)
Q Consensus 332 ~~vvlF~~~~~~-----~~~~~~lA~~~~~~-~~f~~~~v~----------------------------~~~~~l~~~f~ 377 (445)
+++|.|...... .+.+..+..+|.++ +.|+.+.++ +.+..+++.|+
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 127 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYD 127 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhC
Confidence 477777654331 34566777777654 667656552 23567999999
Q ss_pred CCCCCeEEEEccCCcccc----------cccccChhhHHHHHHHH
Q 013319 378 VDALPAIVGWLSNGEKDV----------LKTGISVKDQKSSIHEL 412 (445)
Q Consensus 378 V~~~Ptlv~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 412 (445)
|..+|+++++.+++.... +.+..+.+++...+..+
T Consensus 128 v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 128 AACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDAL 172 (196)
T ss_dssp CCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHH
Confidence 999999998888776432 22334556665555543
No 448
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=94.40 E-value=0.23 Score=43.01 Aligned_cols=65 Identities=9% Similarity=0.044 Sum_probs=45.6
Q ss_pred CCCEEEEEecCCC-----ChHHHHHHHHHhhccceEEEEeec----------------------------CCChHHHHHc
Q 013319 330 RLPSVLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVH----------------------------DVSDPAVKKL 376 (445)
Q Consensus 330 ~~~~vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~----------------------------~~~~~l~~~f 376 (445)
.++++|.|..... ..+.+.+++.+|.+++.|+.+.++ +.+..+++.|
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 112 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAY 112 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHT
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHc
Confidence 4677777765432 246677888888776666555442 2346789999
Q ss_pred CCCCCCeEEEEccCCccc
Q 013319 377 GVDALPAIVGWLSNGEKD 394 (445)
Q Consensus 377 ~V~~~Ptlv~~~~~~~~~ 394 (445)
+|..+|+++++.+++...
T Consensus 113 ~v~~~P~~~lid~~G~i~ 130 (188)
T 2cvb_A 113 RALRTPEVFLFDERRLLR 130 (188)
T ss_dssp TCCEESEEEEECTTCBEE
T ss_pred CCCCCCeEEEECCCCcEE
Confidence 999999999888877653
No 449
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.36 E-value=0.034 Score=45.81 Aligned_cols=64 Identities=8% Similarity=0.106 Sum_probs=39.8
Q ss_pred hhHHHHhhcCCcEEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc---h---h-hHhHhCCccCCCcEEEE
Q 013319 207 QVFKKEIVEKGMTWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE---A---S-LCKELGVHRPRSPRIFA 278 (445)
Q Consensus 207 ~~f~~~v~~~~~~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~---~---~-lc~~~~I~~~~~Pti~~ 278 (445)
++|++. .+... +|.|..+||++|++ ...+++. ..-.+.+..||++.. . + +.+..|...+ |+|++
T Consensus 5 ~~~~~i-i~~~~--Vvvysk~~Cp~C~~ak~lL~~~---~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tV--P~IfI 76 (127)
T 3l4n_A 5 KEYSLI-LDLSP--IIIFSKSTCSYSKGMKELLENE---YQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTV--PNLLV 76 (127)
T ss_dssp HHHHHH-HTSCS--EEEEECTTCHHHHHHHHHHHHH---EEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSS--CEEEE
T ss_pred HHHHHH-HccCC--EEEEEcCCCccHHHHHHHHHHh---cccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCc--ceEEE
Confidence 457554 44443 78899999999999 6666542 111234555565543 1 2 3344588889 99976
No 450
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=94.24 E-value=0.27 Score=41.70 Aligned_cols=88 Identities=7% Similarity=0.077 Sum_probs=51.9
Q ss_pred ccCCCCEEEEEecCCCC-hHHH-------HHHHHHhhccceEEEEeecC-CChHHHHHcCCCCCCeEEEEccC-C-cccc
Q 013319 327 AKARLPSVLLLSTKKET-PIIW-------RVLSGMYHERLNFYDTEVHD-VSDPAVKKLGVDALPAIVGWLSN-G-EKDV 395 (445)
Q Consensus 327 ~~~~~~~vvlF~~~~~~-~~~~-------~~lA~~~~~~~~f~~~~v~~-~~~~l~~~f~V~~~Ptlv~~~~~-~-~~~~ 395 (445)
...+++++|.|+..... ...+ ..++..++....++.+.+.. ....+.++|+|.++|+++++..+ + ....
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 35578888888875432 2222 23333444445555555443 34568999999999999988875 4 3444
Q ss_pred cccccChhhHHHHHHHHHhhhhh
Q 013319 396 LKTGISVKDQKSSIHELSKLLDG 418 (445)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~ 418 (445)
+ ++.+.+++ +..+.++++.
T Consensus 119 ~-~g~~~~~f---l~~L~~~l~~ 137 (153)
T 2dlx_A 119 W-HQLDVSSF---LDQVTGFLGE 137 (153)
T ss_dssp E-SSCCHHHH---HHHHHHHHHH
T ss_pred c-CCCCHHHH---HHHHHHHHHh
Confidence 5 44666555 3333344444
No 451
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=94.14 E-value=0.028 Score=46.88 Aligned_cols=61 Identities=13% Similarity=0.230 Sum_probs=39.3
Q ss_pred hhHHHHhhcCCcEEEEEEEC-----CCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhH----hHhCCccCCCcEE
Q 013319 207 QVFKKEIVEKGMTWLLFFYS-----PSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLC----KELGVHRPRSPRI 276 (445)
Q Consensus 207 ~~f~~~v~~~~~~~lV~Fya-----p~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc----~~~~I~~~~~Pti 276 (445)
+.+++.+.. .. ++| |.. |||++|+. ...+.+. .+.+..||++.++.+. +..|...+ |.|
T Consensus 26 ~~v~~~i~~-~~-Vvv-y~ks~~~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~~L~~~~G~~tv--P~V 94 (135)
T 2wci_A 26 EKIQRQIAE-NP-ILL-YMKGSPKLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRAELPKYANWPTF--PQL 94 (135)
T ss_dssp HHHHHHHHH-CS-EEE-EESBCSSSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHHHHHHHHTCCSS--CEE
T ss_pred HHHHHHhcc-CC-EEE-EEEecCCCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHHHHHHHHCCCCc--CEE
Confidence 345444433 32 444 555 99999998 6555432 4678888998776543 34577888 987
Q ss_pred EE
Q 013319 277 FA 278 (445)
Q Consensus 277 ~~ 278 (445)
++
T Consensus 95 fI 96 (135)
T 2wci_A 95 WV 96 (135)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 452
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=94.12 E-value=0.47 Score=40.04 Aligned_cols=82 Identities=16% Similarity=0.027 Sum_probs=50.7
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEee----------------------cCCChHHHHHcCCCCC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEV----------------------HDVSDPAVKKLGVDAL 381 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v----------------------~~~~~~l~~~f~V~~~ 381 (445)
.+++++|.|+..... .+.+..++.. .+.++.+.+ .+.+..++++|+|..+
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 126 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGA 126 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCcccc
Confidence 567888888754332 2334444432 466655542 2245679999999999
Q ss_pred CeEEEEccCCccc-ccccccChhhHHHHHHHHH
Q 013319 382 PAIVGWLSNGEKD-VLKTGISVKDQKSSIHELS 413 (445)
Q Consensus 382 Ptlv~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 413 (445)
|+.+++.+++... .+.+..+.+++...+..+.
T Consensus 127 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 127 PETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp SEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred CEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 9888787777643 4455566666655555443
No 453
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=94.11 E-value=0.33 Score=40.45 Aligned_cols=83 Identities=8% Similarity=-0.022 Sum_probs=51.4
Q ss_pred CCCCEEEEEecCCC-----C-hHHHHHHHHHhhc-cceEEEEeec---------------------------CCCh----
Q 013319 329 ARLPSVLLLSTKKE-----T-PIIWRVLSGMYHE-RLNFYDTEVH---------------------------DVSD---- 370 (445)
Q Consensus 329 ~~~~~vvlF~~~~~-----~-~~~~~~lA~~~~~-~~~f~~~~v~---------------------------~~~~---- 370 (445)
..++++|.|..... . .+.+.+++.+|.+ .+.|+.+.+. +.+.
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 35677777765432 1 3456666677763 4666544431 1112
Q ss_pred -HHHHHcCCCCCCeEEEEccCCccc-ccccccChhhHHHHHHH
Q 013319 371 -PAVKKLGVDALPAIVGWLSNGEKD-VLKTGISVKDQKSSIHE 411 (445)
Q Consensus 371 -~l~~~f~V~~~Ptlv~~~~~~~~~-~~~~~~~~~~~~~~~~~ 411 (445)
.+++.|+|..+|+++++.+++... .+.+..+.+++...+..
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 149 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIAT 149 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 589999999999999888877643 44555566666544443
No 454
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=93.98 E-value=0.2 Score=42.09 Aligned_cols=44 Identities=14% Similarity=0.208 Sum_probs=31.6
Q ss_pred CChHHHHHcCCCCCCeEEEEccCCcc-cccccccChhhHHHHHHH
Q 013319 368 VSDPAVKKLGVDALPAIVGWLSNGEK-DVLKTGISVKDQKSSIHE 411 (445)
Q Consensus 368 ~~~~l~~~f~V~~~Ptlv~~~~~~~~-~~~~~~~~~~~~~~~~~~ 411 (445)
.+..++++|+|..+|+++++.+++.. ..+.+..+.+++..++..
T Consensus 109 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 153 (164)
T 2h30_A 109 NGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRN 153 (164)
T ss_dssp TTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHC
T ss_pred CchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 45789999999999999988776654 345555666666555543
No 455
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=93.76 E-value=0.15 Score=45.30 Aligned_cols=40 Identities=15% Similarity=0.137 Sum_probs=27.6
Q ss_pred CcEEEEEEECCCCccCCC-hhHH-HHHHHHh--cCccEEEEEeC
Q 013319 217 GMTWLLFFYSPSSNRDGY-ESVI-EEVANSM--EGALKVGSINC 256 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~-~p~~-~~~a~~l--~~~v~~~~Vdc 256 (445)
..+.||+|+...|++|+. .+.. ..+.+.| .+.|+|...+.
T Consensus 29 a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 29 APVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 347889999999999998 6654 5666666 34566665443
No 456
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=93.69 E-value=0.26 Score=40.31 Aligned_cols=80 Identities=9% Similarity=0.031 Sum_probs=47.0
Q ss_pred CCCCEEEEEecCCCC--h---HHHHH---HHHHhhcc-ceEEEEeecCCChHH------------------------HHH
Q 013319 329 ARLPSVLLLSTKKET--P---IIWRV---LSGMYHER-LNFYDTEVHDVSDPA------------------------VKK 375 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~--~---~~~~~---lA~~~~~~-~~f~~~~v~~~~~~l------------------------~~~ 375 (445)
..++++|.|+..... . +.+.. +...++++ +.++.++++. +.+. ++.
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDE-NREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSS-CHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecC-CHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 456778888754332 1 12333 66666543 5665554442 2222 338
Q ss_pred cCCCCCCeEEEEccCCcccccccccChhhHHHHHHH
Q 013319 376 LGVDALPAIVGWLSNGEKDVLKTGISVKDQKSSIHE 411 (445)
Q Consensus 376 f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (445)
|+|..+|+++++.+++... ....+.+++.+++..
T Consensus 105 ~~v~~~P~~~lid~~G~i~--~~~~~~~~l~~~l~~ 138 (142)
T 3ewl_A 105 YDIRATPTIYLLDGRKRVI--LKDTSMEQLIDYLAT 138 (142)
T ss_dssp SCCCSSSEEEEECTTCBEE--ECSCCHHHHHHHHHC
T ss_pred cCCCCCCeEEEECCCCCEE--ecCCCHHHHHHHHHH
Confidence 9999999999888777643 245566666555543
No 457
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=93.38 E-value=0.031 Score=52.14 Aligned_cols=78 Identities=9% Similarity=0.074 Sum_probs=50.2
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCc------------------cchhhHhHhCCccCCCcEEEEe
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCE------------------TEASLCKELGVHRPRSPRIFAY 279 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~------------------~~~~lc~~~~I~~~~~Pti~~f 279 (445)
+.+..|.+++|++|.. ...+++++..+. +....++.+ ....+.+++|.+.+.||+|++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~--vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~I- 120 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGD--VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAIL- 120 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTS--SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEEE-
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCC--eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEEE-
Confidence 5788899999999999 888888877643 322222321 123477888998777899887
Q ss_pred ccCCCCCCCeeeecCcccHHHHHHHHHh
Q 013319 280 SYKAGDKGSLVEYNEHLVAKNLKSFCRD 307 (445)
Q Consensus 280 ~~~~~~~g~~~~y~g~~~~~~l~~fi~~ 307 (445)
+|+. ...|. +.+.|.+.|.+
T Consensus 121 ------ng~~-~v~G~-d~~~l~~~l~~ 140 (270)
T 2axo_A 121 ------NGRD-HVKGA-DVRGIYDRLDA 140 (270)
T ss_dssp ------TTTE-EEETT-CHHHHHHHHHH
T ss_pred ------CCEE-eecCC-CHHHHHHHHHH
Confidence 2332 22232 45666666653
No 458
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=93.28 E-value=0.58 Score=41.82 Aligned_cols=63 Identities=13% Similarity=0.151 Sum_probs=45.5
Q ss_pred CEEEEEecCCC-----ChHHHHHHHHHhhcc-ceEEEEeec----------------------------CCChHHHHHcC
Q 013319 332 PSVLLLSTKKE-----TPIIWRVLSGMYHER-LNFYDTEVH----------------------------DVSDPAVKKLG 377 (445)
Q Consensus 332 ~~vvlF~~~~~-----~~~~~~~lA~~~~~~-~~f~~~~v~----------------------------~~~~~l~~~f~ 377 (445)
+++|.|..... ..+.+.+++.+|+++ +.|+.+.++ +.+..+++.|+
T Consensus 61 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~ 140 (218)
T 3u5r_E 61 ALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYG 140 (218)
T ss_dssp EEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHT
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcC
Confidence 47777765432 256788888888765 677666553 23568999999
Q ss_pred CCCCCeEEEEccCCccc
Q 013319 378 VDALPAIVGWLSNGEKD 394 (445)
Q Consensus 378 V~~~Ptlv~~~~~~~~~ 394 (445)
|...|+++++.+++...
T Consensus 141 v~~~P~~~liD~~G~i~ 157 (218)
T 3u5r_E 141 AACTPDFFLYDRERRLV 157 (218)
T ss_dssp CCEESEEEEECTTCBEE
T ss_pred CCCCCeEEEECCCCcEE
Confidence 99999999898887653
No 459
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=93.17 E-value=0.54 Score=39.20 Aligned_cols=73 Identities=12% Similarity=0.136 Sum_probs=47.2
Q ss_pred CCCEEEEEecCCCC-----hHHHHHHHHHhhcc-ceEEEEeecCCCh----------------------HHHHHcCCCCC
Q 013319 330 RLPSVLLLSTKKET-----PIIWRVLSGMYHER-LNFYDTEVHDVSD----------------------PAVKKLGVDAL 381 (445)
Q Consensus 330 ~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~-~~f~~~~v~~~~~----------------------~l~~~f~V~~~ 381 (445)
.++++|.|...... .+.+..++.+|.++ +.++.+.++.... .+++.|+|..+
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~ 114 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNL 114 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSC
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcccC
Confidence 46778888764332 35566777777765 6665555443211 28899999999
Q ss_pred CeEEEEccCCccc-ccccccCh
Q 013319 382 PAIVGWLSNGEKD-VLKTGISV 402 (445)
Q Consensus 382 Ptlv~~~~~~~~~-~~~~~~~~ 402 (445)
|+++++.+++... .+.+..+.
T Consensus 115 P~~~lid~~G~i~~~~~g~~~~ 136 (152)
T 2lrt_A 115 PSVFLVNRNNELSARGENIKDL 136 (152)
T ss_dssp SEEEEEETTTEEEEETTTCSCH
T ss_pred ceEEEECCCCeEEEecCCHHHH
Confidence 9999998877644 34444333
No 460
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.94 E-value=0.095 Score=41.86 Aligned_cols=57 Identities=19% Similarity=0.315 Sum_probs=34.7
Q ss_pred EEEEEECCCCccCCChhHHHHHHHHhc-CccEEEEEeCccchhh----HhHh--------CCccCCCcEEEE
Q 013319 220 WLLFFYSPSSNRDGYESVIEEVANSME-GALKVGSINCETEASL----CKEL--------GVHRPRSPRIFA 278 (445)
Q Consensus 220 ~lV~Fyap~C~~C~~~p~~~~~a~~l~-~~v~~~~Vdc~~~~~l----c~~~--------~I~~~~~Pti~~ 278 (445)
-++.|+.+||++|+....=+++.+.|. ..+.+-.+|++.++.+ .+.+ +...+ |.|++
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tv--P~vfi 78 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLP--PQIFN 78 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCS--CEEEE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCC--CEEEE
Confidence 367889999999982101111111111 2578889999887543 3333 66677 98876
No 461
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=92.80 E-value=0.1 Score=40.01 Aligned_cols=50 Identities=10% Similarity=0.276 Sum_probs=34.5
Q ss_pred EEEEECCCCccC------CC-hhHHHHHHHHhcCccEEEEEeCccchh----hHhHhC--CccCCCcEEEE
Q 013319 221 LLFFYSPSSNRD------GY-ESVIEEVANSMEGALKVGSINCETEAS----LCKELG--VHRPRSPRIFA 278 (445)
Q Consensus 221 lV~Fyap~C~~C------~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~----lc~~~~--I~~~~~Pti~~ 278 (445)
++.|+++||+.| +. ...++ . ..+.+-.+|++.++. +.+..| ...+ |.|++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~----~--~~i~~~~~di~~~~~~~~~l~~~~g~~~~~v--P~ifi 66 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILD----G--KRIQYQLVDISQDNALRDEMRTLAGNPKATP--PQIVN 66 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH----H--TTCCCEEEETTSCHHHHHHHHHHTTCTTCCS--CEEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHH----H--CCCceEEEECCCCHHHHHHHHHHhCCCCCCC--CEEEE
Confidence 678899999999 45 33332 1 246788899887643 444567 6688 98876
No 462
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=92.72 E-value=0.72 Score=44.76 Aligned_cols=83 Identities=8% Similarity=-0.096 Sum_probs=54.2
Q ss_pred CCCEEEEEecCCCC-----hHHHHHHHHHhhc-cceEEEEeec--------------------------CCChHHHHHcC
Q 013319 330 RLPSVLLLSTKKET-----PIIWRVLSGMYHE-RLNFYDTEVH--------------------------DVSDPAVKKLG 377 (445)
Q Consensus 330 ~~~~vvlF~~~~~~-----~~~~~~lA~~~~~-~~~f~~~~v~--------------------------~~~~~l~~~f~ 377 (445)
.++++|.|...... .+.+.+++.+|.+ .+.|+.+.+. +.+..+++.|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 56778888764332 4557777777765 3666444321 23467999999
Q ss_pred CCCCCeEEEEccCCccc-ccccccChhhHHHHHHHH
Q 013319 378 VDALPAIVGWLSNGEKD-VLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 378 V~~~Ptlv~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 412 (445)
|..+|+++++.+++... .+.+..+.+++...+..+
T Consensus 162 V~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 162 NRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQL 197 (352)
T ss_dssp CCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHH
T ss_pred CCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 99999999887777643 444555666665555544
No 463
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=92.65 E-value=0.029 Score=49.61 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=33.6
Q ss_pred cEEEEEEECCCCccCCC-hhHH---HHHHHHhcCccEEEEEeCc
Q 013319 218 MTWLLFFYSPSSNRDGY-ESVI---EEVANSMEGALKVGSINCE 257 (445)
Q Consensus 218 ~~~lV~Fyap~C~~C~~-~p~~---~~~a~~l~~~v~~~~Vdc~ 257 (445)
.+.||+|++.||+||+. .|.+ .++.+.+.+.++|..++..
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 46899999999999999 8875 6898988777778777654
No 464
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=92.31 E-value=0.12 Score=39.05 Aligned_cols=50 Identities=16% Similarity=0.178 Sum_probs=35.6
Q ss_pred EEEEECC----CCccCCC-hhHHHHHHHHhcCccEEEEEeCc-----cch----hhHhHhCCc-----cCCCcEEEE
Q 013319 221 LLFFYSP----SSNRDGY-ESVIEEVANSMEGALKVGSINCE-----TEA----SLCKELGVH-----RPRSPRIFA 278 (445)
Q Consensus 221 lV~Fyap----~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~-----~~~----~lc~~~~I~-----~~~~Pti~~ 278 (445)
++.|..+ ||++|+. ...+++. .+.+-.+|++ .++ .+.+..+.. .+ |+|++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~------gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tv--P~v~i 70 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK------KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTM--PQVFA 70 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT------TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCS--CEEEC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc------CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCcc--CEEEE
Confidence 5678899 9999998 5554432 4667778887 553 456677877 78 98875
No 465
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=92.20 E-value=0.075 Score=42.55 Aligned_cols=56 Identities=7% Similarity=0.174 Sum_probs=37.9
Q ss_pred hhcCCcEEEEEEEC-----CCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhhH----hHhCCccCCCcEEEE
Q 013319 213 IVEKGMTWLLFFYS-----PSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASLC----KELGVHRPRSPRIFA 278 (445)
Q Consensus 213 v~~~~~~~lV~Fya-----p~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~lc----~~~~I~~~~~Pti~~ 278 (445)
+.+++ -+|.|.. |||++|+. ...+++. .+.+-.+|++.++.+. +..|...+ |.|++
T Consensus 12 ~i~~~--~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~------gi~y~~~di~~d~~~~~~l~~~~g~~tv--P~ifi 77 (111)
T 3zyw_A 12 LTHAA--PCMLFMKGTPQEPRCGFSKQMVEILHKH------NIQFSSFDIFSDEEVRQGLKAYSSWPTY--PQLYV 77 (111)
T ss_dssp HHTSS--SEEEEESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCCSS--CEEEE
T ss_pred HHhcC--CEEEEEecCCCCCcchhHHHHHHHHHHc------CCCeEEEECcCCHHHHHHHHHHHCCCCC--CEEEE
Confidence 34444 3567778 99999998 6555432 4567778888776543 33477788 99876
No 466
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=92.05 E-value=1.1 Score=37.28 Aligned_cols=82 Identities=10% Similarity=-0.069 Sum_probs=49.4
Q ss_pred CCCEEEEEecCCCC------hHHHHHHHHHhhc-----cceEEEEeecCC---------------------------ChH
Q 013319 330 RLPSVLLLSTKKET------PIIWRVLSGMYHE-----RLNFYDTEVHDV---------------------------SDP 371 (445)
Q Consensus 330 ~~~~vvlF~~~~~~------~~~~~~lA~~~~~-----~~~f~~~~v~~~---------------------------~~~ 371 (445)
.++++|.|...... .+.+.++...+.+ .+.++.++++.. ...
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 45777777654322 2345666666654 566655554421 124
Q ss_pred HHHHcCCCCCC---------------eEEEEccCCccc-ccccccChhhHHHHHHH
Q 013319 372 AVKKLGVDALP---------------AIVGWLSNGEKD-VLKTGISVKDQKSSIHE 411 (445)
Q Consensus 372 l~~~f~V~~~P---------------tlv~~~~~~~~~-~~~~~~~~~~~~~~~~~ 411 (445)
+++.|+|...| +++++.+++... .+.+..+.+++.+.+..
T Consensus 103 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 158 (164)
T 2ggt_A 103 VARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIAT 158 (164)
T ss_dssp HHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 78899999888 788788777644 45455566666554443
No 467
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=91.74 E-value=0.25 Score=42.61 Aligned_cols=62 Identities=6% Similarity=-0.064 Sum_probs=44.9
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCCChHHHHHcC---CCCCCeEEEEccCCc
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDVSDPAVKKLG---VDALPAIVGWLSNGE 392 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~~~~l~~~f~---V~~~Ptlv~~~~~~~ 392 (445)
..++++|.|+..+.. .+.+.+++..+. .+.|..++++ .+++++.+|. |.++||++++.+++.
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d-~~~~~~~~~~~~~v~~iPt~i~~~~~G~ 122 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKG-RAEDDLRQRLALERIAIPLVLVLDEEFN 122 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHH-HHHHHTTTTTTCSSCCSSEEEEECTTCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECC-CCHHHHHHHHHcCCCCcCeEEEECCCCC
Confidence 346778888766542 567888887775 5677655544 5577888887 999999998888654
No 468
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=91.70 E-value=1.8 Score=36.21 Aligned_cols=66 Identities=9% Similarity=0.049 Sum_probs=41.5
Q ss_pred EEEEEe-cCCCC-----hHHHHHHHHHhhcc-ceEEEEeec--------------------CCChHHHHHcCCCC----C
Q 013319 333 SVLLLS-TKKET-----PIIWRVLSGMYHER-LNFYDTEVH--------------------DVSDPAVKKLGVDA----L 381 (445)
Q Consensus 333 ~vvlF~-~~~~~-----~~~~~~lA~~~~~~-~~f~~~~v~--------------------~~~~~l~~~f~V~~----~ 381 (445)
++|.|. ..... .+.+..+..+|+++ +.++.+.++ +.+..+++.|+|.+ .
T Consensus 32 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~ 111 (161)
T 3drn_A 32 IVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPA 111 (161)
T ss_dssp EEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCC
T ss_pred EEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCccc
Confidence 677776 33221 23455566666554 555444433 13567999999999 9
Q ss_pred CeEEEEccCCccc-cccc
Q 013319 382 PAIVGWLSNGEKD-VLKT 398 (445)
Q Consensus 382 Ptlv~~~~~~~~~-~~~~ 398 (445)
|+++++.+++... .+.+
T Consensus 112 P~~~lid~~G~i~~~~~g 129 (161)
T 3drn_A 112 RITFVIDKKGIIRHIYNS 129 (161)
T ss_dssp CEEEEECTTSBEEEEEEC
T ss_pred ceEEEECCCCEEEEEEec
Confidence 9999898887654 3444
No 469
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=91.57 E-value=1.7 Score=36.46 Aligned_cols=83 Identities=10% Similarity=-0.100 Sum_probs=50.6
Q ss_pred CCCEEEEEecCCCC------hHHHHHHHHHhh-----ccceEEEEeecCC--C-------------------------hH
Q 013319 330 RLPSVLLLSTKKET------PIIWRVLSGMYH-----ERLNFYDTEVHDV--S-------------------------DP 371 (445)
Q Consensus 330 ~~~~vvlF~~~~~~------~~~~~~lA~~~~-----~~~~f~~~~v~~~--~-------------------------~~ 371 (445)
.++++|.|...... .+.+.++...|. ..+.++.++++.. + ..
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 46777777654322 245666666675 3566666655421 1 25
Q ss_pred HHHHcCCCCCC---------------eEEEEccCCccc-ccccccChhhHHHHHHHH
Q 013319 372 AVKKLGVDALP---------------AIVGWLSNGEKD-VLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 372 l~~~f~V~~~P---------------tlv~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 412 (445)
+++.|+|...| +++++.+++... .+.+..+.+++...+..+
T Consensus 106 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 162 (171)
T 2rli_A 106 ASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRH 162 (171)
T ss_dssp HHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 88899998877 788787777644 455555666665554443
No 470
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=91.20 E-value=0.11 Score=41.27 Aligned_cols=56 Identities=11% Similarity=0.226 Sum_probs=36.2
Q ss_pred hhcCCcEEEEEEEC-----CCCccCCC-hhHHHHHHHHhcCccEEEEEeCccchhh----HhHhCCccCCCcEEEE
Q 013319 213 IVEKGMTWLLFFYS-----PSSNRDGY-ESVIEEVANSMEGALKVGSINCETEASL----CKELGVHRPRSPRIFA 278 (445)
Q Consensus 213 v~~~~~~~lV~Fya-----p~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~~l----c~~~~I~~~~~Pti~~ 278 (445)
+.+.+. +|.|.. |||++|++ ...+.+. .+.+-.+|+++++.+ .+..+...+ |+|++
T Consensus 14 ~i~~~~--Vvvy~k~t~~~p~Cp~C~~ak~~L~~~------gi~~~~~dI~~~~~~~~~l~~~~g~~tv--P~ifi 79 (109)
T 3ipz_A 14 LVNSEK--VVLFMKGTRDFPMCGFSNTVVQILKNL------NVPFEDVNILENEMLRQGLKEYSNWPTF--PQLYI 79 (109)
T ss_dssp HHTSSS--EEEEESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCSSS--CEEEE
T ss_pred HHccCC--EEEEEecCCCCCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHHCCCCC--CeEEE
Confidence 444443 344554 59999998 6555542 466778888776544 334477888 98866
No 471
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=91.18 E-value=0.17 Score=44.17 Aligned_cols=53 Identities=6% Similarity=0.018 Sum_probs=41.2
Q ss_pred CcEEEEEEECCCCccCCC--hhHHHHHHHHhcC-cc-EEEEEeCccc---hhhHhHhCCc
Q 013319 217 GMTWLLFFYSPSSNRDGY--ESVIEEVANSMEG-AL-KVGSINCETE---ASLCKELGVH 269 (445)
Q Consensus 217 ~~~~lV~Fyap~C~~C~~--~p~~~~~a~~l~~-~v-~~~~Vdc~~~---~~lc~~~~I~ 269 (445)
+.++|+.|.+.||+.|.. .|.|.+.+.+++. .+ .+..|.++.. ...|++.++.
T Consensus 48 k~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~ 107 (176)
T 4f82_A 48 KRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTA 107 (176)
T ss_dssp CEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCC
Confidence 335566677999999974 9999999999975 57 8888998863 4567777775
No 472
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=90.94 E-value=0.68 Score=37.81 Aligned_cols=78 Identities=10% Similarity=0.090 Sum_probs=45.7
Q ss_pred CCCEEEEEecCCCC-----hHHHHH---HHHHhhc-cceEEEEeecCCChH-----------------------HHHHcC
Q 013319 330 RLPSVLLLSTKKET-----PIIWRV---LSGMYHE-RLNFYDTEVHDVSDP-----------------------AVKKLG 377 (445)
Q Consensus 330 ~~~~vvlF~~~~~~-----~~~~~~---lA~~~~~-~~~f~~~~v~~~~~~-----------------------l~~~f~ 377 (445)
.++++|.|+..... .+.+.. +...+++ .+.++.+++....+. +++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 46788888754432 244555 6666643 355654544322111 477899
Q ss_pred CCCCCeEEEEccCCcccccccccChhhHHHHH
Q 013319 378 VDALPAIVGWLSNGEKDVLKTGISVKDQKSSI 409 (445)
Q Consensus 378 V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~ 409 (445)
|..+|+++++.+++... + .....+++..++
T Consensus 111 v~~~P~~~lid~~G~i~-~-~~~~~~~l~~~l 140 (142)
T 3eur_A 111 LRAIPTLYLLDKNKTVL-L-KDATLQKVEQYL 140 (142)
T ss_dssp CTTCSEEEEECTTCBEE-E-EEECHHHHHHHH
T ss_pred CCcCCeEEEECCCCcEE-e-cCCCHHHHHHHH
Confidence 99999999888777643 2 223444554433
No 473
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=90.71 E-value=0.14 Score=41.42 Aligned_cols=50 Identities=10% Similarity=0.208 Sum_probs=32.9
Q ss_pred EEEEEC-----CCCccCCC-hhHHHHHHHHhcCccE-EEEEeCccchhhH----hHhCCccCCCcEEEE
Q 013319 221 LLFFYS-----PSSNRDGY-ESVIEEVANSMEGALK-VGSINCETEASLC----KELGVHRPRSPRIFA 278 (445)
Q Consensus 221 lV~Fya-----p~C~~C~~-~p~~~~~a~~l~~~v~-~~~Vdc~~~~~lc----~~~~I~~~~~Pti~~ 278 (445)
+|.|.. |||++|+. ...+++. .+. +-.+|+++++.+. +..+...+ |+|++
T Consensus 22 Vvvfsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~vdV~~d~~~~~~l~~~tg~~tv--P~vfI 82 (118)
T 2wem_A 22 VVVFLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTI--PQVYL 82 (118)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT------TCCCCEEEESSSCHHHHHHHHHHHTCCSS--CEEEE
T ss_pred EEEEEecCCCCCccHHHHHHHHHHHHc------CCCCCEEEEcCCCHHHHHHHHHHhCCCCc--CeEEE
Confidence 444555 59999998 6555532 353 6777887765443 33477788 99876
No 474
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=90.51 E-value=0.14 Score=46.64 Aligned_cols=52 Identities=17% Similarity=0.232 Sum_probs=38.2
Q ss_pred EEEEEEECCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccch---hhHhHhCCccCCCcEEEE
Q 013319 219 TWLLFFYSPSSNRDGY-ESVIEEVANSMEGALKVGSINCETEA---SLCKELGVHRPRSPRIFA 278 (445)
Q Consensus 219 ~~lV~Fyap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~~---~lc~~~~I~~~~~Pti~~ 278 (445)
.-++.|..+||++|+. ...+++. .+.+-.+|++.+. .+.+.++...+ |+|++
T Consensus 170 ~~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~~l~~~~g~~~v--P~~~~ 225 (241)
T 1nm3_A 170 ESISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDATIVSVRAVSGRTTV--PQVFI 225 (241)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCCHHHHHHHTCCSSS--CEEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchHHHHHHHHhCCCCc--CEEEE
Confidence 4578889999999999 6555542 3456667776653 47777898899 99865
No 475
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=90.41 E-value=0.83 Score=34.54 Aligned_cols=45 Identities=9% Similarity=0.200 Sum_probs=29.1
Q ss_pred EEEEeecCCChHHHHHcCCCCCCeEEEEccCCcccccccccChhhHHHHHH
Q 013319 360 FYDTEVHDVSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQKSSIH 410 (445)
Q Consensus 360 f~~~~v~~~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (445)
+..+++. .+++++++|++. +|+|++ .+++. +. +..+.+++++++.
T Consensus 29 ~~~vdid-~~~~l~~~~g~~-vPtl~~--~~G~~-v~-g~~~~~~L~~~l~ 73 (87)
T 1ttz_A 29 FFSVFID-DDAALESAYGLR-VPVLRD--PMGRE-LD-WPFDAPRLRAWLD 73 (87)
T ss_dssp EEEEECT-TCHHHHHHHTTT-CSEEEC--TTCCE-EE-SCCCHHHHHHHHH
T ss_pred eEEEECC-CCHHHHHHhCCC-cCeEEE--ECCEE-Ee-CCCCHHHHHHHHH
Confidence 4445554 678999999998 999986 44433 22 5556655544443
No 476
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=89.74 E-value=0.31 Score=46.75 Aligned_cols=83 Identities=13% Similarity=0.115 Sum_probs=53.8
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcCccEEEEEeCccc---------------------hhhHhHhCCc----
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEGALKVGSINCETE---------------------ASLCKELGVH---- 269 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~~v~~~~Vdc~~~---------------------~~lc~~~~I~---- 269 (445)
++++|+.|| +.||+.|.. .+.|.+ .....+.+..|+++.. ..+++.|||.
T Consensus 24 Gk~vvl~F~p~~~tp~C~~e~~~~~~---~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~~ 100 (322)
T 4eo3_A 24 GKYTILFFFPKAGTSGSTREAVEFSR---ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENGK 100 (322)
T ss_dssp TSEEEEEECSSTTSHHHHHHHHHHHH---SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETTE
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHH---HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCCc
Confidence 457888899 568999988 777754 2223577888887642 3678888884
Q ss_pred cCCCcEEEEeccCCCCCCCeee-ecC---cccHHHHHHHHHhh
Q 013319 270 RPRSPRIFAYSYKAGDKGSLVE-YNE---HLVAKNLKSFCRDH 308 (445)
Q Consensus 270 ~~~~Pti~~f~~~~~~~g~~~~-y~g---~~~~~~l~~fi~~~ 308 (445)
.+ |+.++. ..+|.+.. |.+ ....+++.+++.+.
T Consensus 101 ~~--r~tfiI----d~~G~i~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 101 TV--RSTFLI----DRWGFVRKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp EC--CEEEEE----CTTSBEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred Cc--cEEEEE----CCCCEEEEEEeCCCccccHHHHHHHHhhh
Confidence 45 777777 24564432 433 23457777777643
No 477
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=89.72 E-value=3.1 Score=35.47 Aligned_cols=84 Identities=11% Similarity=0.029 Sum_probs=50.1
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhh-ccceEEEEeecCCC----hHHHHHcCCC-------------------
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYH-ERLNFYDTEVHDVS----DPAVKKLGVD------------------- 379 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~-~~~~f~~~~v~~~~----~~l~~~f~V~------------------- 379 (445)
..++++|.|...... .+.+..+...+. ..+.++.+.++..+ ...+++++++
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 356777877754332 345666777776 45666656554321 4566777774
Q ss_pred ----CCCeEEEEccCCccc-ccccccC--hhhHHHHHHHH
Q 013319 380 ----ALPAIVGWLSNGEKD-VLKTGIS--VKDQKSSIHEL 412 (445)
Q Consensus 380 ----~~Ptlv~~~~~~~~~-~~~~~~~--~~~~~~~~~~~ 412 (445)
.+|+++++.+++... .+.+..+ .+++...++.+
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHH
Confidence 799999888877643 4444433 45565544433
No 478
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=89.02 E-value=0.74 Score=37.63 Aligned_cols=65 Identities=6% Similarity=-0.046 Sum_probs=40.2
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhc-cceEEEEeecCC-------------------------ChHHHHHcC
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHE-RLNFYDTEVHDV-------------------------SDPAVKKLG 377 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~-~~~f~~~~v~~~-------------------------~~~l~~~f~ 377 (445)
..++++|.|...... .+.+.++..+|.+ .+.++.++++.. +..+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 346777777755432 2345555555543 255544443311 135889999
Q ss_pred CCCCCeEEEEccCCcc
Q 013319 378 VDALPAIVGWLSNGEK 393 (445)
Q Consensus 378 V~~~Ptlv~~~~~~~~ 393 (445)
|..+|+.+++.+++..
T Consensus 111 v~~~P~~~lid~~G~i 126 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVI 126 (143)
T ss_dssp GGGCCCEEEECTTSBE
T ss_pred CCCCCcEEEECCCCEE
Confidence 9999999988887764
No 479
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=88.88 E-value=0.46 Score=42.84 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=37.6
Q ss_pred CcEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccEEEEEeCccc
Q 013319 217 GMTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALKVGSINCETE 259 (445)
Q Consensus 217 ~~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~~~~Vdc~~~ 259 (445)
++.+|+.|| +.||+.|.. ...|.+...+++. .+.+..|.++..
T Consensus 56 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~ 101 (219)
T 3tue_A 56 GKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSE 101 (219)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCH
T ss_pred CCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCch
Confidence 456778888 899999999 9999999999987 799999999874
No 480
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=88.31 E-value=0.084 Score=43.30 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=20.7
Q ss_pred hHHHHHcCCCCCCeEEEEccCCccc
Q 013319 370 DPAVKKLGVDALPAIVGWLSNGEKD 394 (445)
Q Consensus 370 ~~l~~~f~V~~~Ptlv~~~~~~~~~ 394 (445)
..++++|+|..+|+++++.+++...
T Consensus 98 ~~~~~~~~v~~~P~~~lid~~G~i~ 122 (143)
T 2lus_A 98 SNVTAKYGITGIPALVIVKKDGTLI 122 (143)
Confidence 4789999999999999888776543
No 481
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=88.18 E-value=0.23 Score=43.23 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=32.9
Q ss_pred cEEEEEEECCCCccCCC-hhHH-HHHHHHhcCccEEEEEeCc
Q 013319 218 MTWLLFFYSPSSNRDGY-ESVI-EEVANSMEGALKVGSINCE 257 (445)
Q Consensus 218 ~~~lV~Fyap~C~~C~~-~p~~-~~~a~~l~~~v~~~~Vdc~ 257 (445)
.+.+|.|++++|++|.. .+.+ .++++++...+.+..+...
T Consensus 18 ~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 18 DKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp TTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 35788999999999999 8888 9998888766777766644
No 482
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=88.01 E-value=0.52 Score=38.13 Aligned_cols=44 Identities=9% Similarity=0.133 Sum_probs=30.7
Q ss_pred CCCccCCC-hhHHHHHHHHhcCccE---EEEEeCccchhh----HhHhCCccCCCcEEEE
Q 013319 227 PSSNRDGY-ESVIEEVANSMEGALK---VGSINCETEASL----CKELGVHRPRSPRIFA 278 (445)
Q Consensus 227 p~C~~C~~-~p~~~~~a~~l~~~v~---~~~Vdc~~~~~l----c~~~~I~~~~~Pti~~ 278 (445)
|||++|+. ...+.+. .+. +..+|+..++.+ .+..|...+ |.|++
T Consensus 29 p~Cp~C~~ak~lL~~~------gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tv--P~vfI 80 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ------GVDPAKFAAYNVLEDPELREGIKEFSEWPTI--PQLYV 80 (121)
T ss_dssp BCTTHHHHHHHHHHHH------TBCGGGEEEEECTTCHHHHHHHHHHHTCCSS--CEEEE
T ss_pred CCCccHHHHHHHHHHc------CCCcceEEEEEecCCHHHHHHHHHHhCCCCC--CeEEE
Confidence 59999999 7666654 233 677887776543 344577788 99876
No 483
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=87.98 E-value=0.31 Score=35.84 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=22.9
Q ss_pred HHHHhhccceEEEEeecC--CChHHHHHcCCCCCCeEEE
Q 013319 350 LSGMYHERLNFYDTEVHD--VSDPAVKKLGVDALPAIVG 386 (445)
Q Consensus 350 lA~~~~~~~~f~~~~v~~--~~~~l~~~f~V~~~Ptlv~ 386 (445)
++..+...+.+ +.++. .+.++++++||..+|++++
T Consensus 25 ~~~~~~~~~~~--~~v~~~~~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 25 AIDPSKYTVEI--VHLGTDKARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp HSCTTTEEEEE--EETTTCSSTHHHHHHHTCCEEEEEEE
T ss_pred HHHhcCCeEEE--EEecCChhhHHHHHHcCCCcCCEEEE
Confidence 44433333344 44443 4678899999999999985
No 484
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=87.58 E-value=0.53 Score=41.10 Aligned_cols=54 Identities=13% Similarity=0.054 Sum_probs=40.4
Q ss_pred cEEEEEEE-CCCCccCC-C-hhHHHHHHHHh-cC-cc-EEEEEeCccc---hhhHhHhCCccC
Q 013319 218 MTWLLFFY-SPSSNRDG-Y-ESVIEEVANSM-EG-AL-KVGSINCETE---ASLCKELGVHRP 271 (445)
Q Consensus 218 ~~~lV~Fy-ap~C~~C~-~-~p~~~~~a~~l-~~-~v-~~~~Vdc~~~---~~lc~~~~I~~~ 271 (445)
+.+++.|| ..||+.|. . .+.|.+.+.++ +. .+ .+..|.++.. ...|+++++..+
T Consensus 44 k~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f 106 (182)
T 1xiy_A 44 KKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKI 106 (182)
T ss_dssp CEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSS
T ss_pred CcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence 34455555 56999999 8 99999999998 54 56 4888888874 567888887545
No 485
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=87.57 E-value=2.9 Score=32.12 Aligned_cols=77 Identities=12% Similarity=0.159 Sum_probs=43.0
Q ss_pred cCCCCEEEEEecCCCC-hHHHHHHHHHhhccceEEEEeecC-CChHHHHHcCCCCCCeEEEEccCCcccccccccChhhH
Q 013319 328 KARLPSVLLLSTKKET-PIIWRVLSGMYHERLNFYDTEVHD-VSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQ 405 (445)
Q Consensus 328 ~~~~~~vvlF~~~~~~-~~~~~~lA~~~~~~~~f~~~~v~~-~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~ 405 (445)
....+.+++|+...-. -...+.+-..+...+.|..+++.+ .+++++++|+ ..+|+|+ . +++.. .-.+.+.+++
T Consensus 13 ~~~~~~v~~f~~~~C~~C~~~~~~L~~l~~~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~-~g~~~-~~~g~~~~~l 87 (100)
T 1wjk_A 13 NRALPVLTLFTKAPCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYK-FDIPVFH--L-NGQFL-MMHRVNTSKL 87 (100)
T ss_dssp CCCCCEEEEEECSSCHHHHHHHHHTSTTSSSSEEEEEETTSSTTHHHHHHSS-SSCSEEE--E-SSSEE-EESSCCHHHH
T ss_pred cCCCCEEEEEeCCCCcchHHHHHHHHHhhhCCeEEEEECCCcchHHHHHHHC-CCCCEEE--E-CCEEE-EecCCCHHHH
Confidence 3455678888764321 122222212223447787777653 4588999999 9999874 3 33322 2355666555
Q ss_pred HHHH
Q 013319 406 KSSI 409 (445)
Q Consensus 406 ~~~~ 409 (445)
++++
T Consensus 88 ~~~l 91 (100)
T 1wjk_A 88 EKQL 91 (100)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 486
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=87.48 E-value=0.73 Score=43.44 Aligned_cols=65 Identities=8% Similarity=0.062 Sum_probs=41.1
Q ss_pred EEEEecCCC-----ChHHHHHHHHHhhccceEEEEeecC---CChHHHHHcCCCCCCeEEEEccCCcccccccccChhhH
Q 013319 334 VLLLSTKKE-----TPIIWRVLSGMYHERLNFYDTEVHD---VSDPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQ 405 (445)
Q Consensus 334 vvlF~~~~~-----~~~~~~~lA~~~~~~~~f~~~~v~~---~~~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~ 405 (445)
++.|+...- ..+.|+++|.++ .++++...+ .+++++++|+|+++||+++ +++ .|.+..+.+++
T Consensus 201 vV~F~A~WC~~Ck~l~p~le~lA~~l----~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i---~G~--~~~G~~~~~~L 271 (291)
T 3kp9_A 201 GTMYGAYWCPHCQDQKELFGAAFDQV----PYVECSPNGPGTPQAQECTEAGITSYPTWII---NGR--TYTGVRSLEAL 271 (291)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGS----CEEESCSSCSSSCCCHHHHTTTCCSTTEEEE---TTE--EEESCCCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHc----CEEEEeecCchhhHHHHHHHcCCcccCeEEE---CCE--EecCCCCHHHH
Confidence 456655432 256677776544 455554222 2689999999999999664 444 37777777555
Q ss_pred HH
Q 013319 406 KS 407 (445)
Q Consensus 406 ~~ 407 (445)
++
T Consensus 272 ~~ 273 (291)
T 3kp9_A 272 AV 273 (291)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 487
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=85.86 E-value=3 Score=35.81 Aligned_cols=84 Identities=7% Similarity=-0.058 Sum_probs=51.9
Q ss_pred CCCEEEEEe-cCCC--C---hHHHHHHHHHhhc-cceEEEEeecC------------------------CChHHHHHcCC
Q 013319 330 RLPSVLLLS-TKKE--T---PIIWRVLSGMYHE-RLNFYDTEVHD------------------------VSDPAVKKLGV 378 (445)
Q Consensus 330 ~~~~vvlF~-~~~~--~---~~~~~~lA~~~~~-~~~f~~~~v~~------------------------~~~~l~~~f~V 378 (445)
.++++|.|. .... + .+.+.+++.+|.+ .+.++.++++. .+..+++.|+|
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 110 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDV 110 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTC
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCC
Confidence 467788887 3322 2 3456666666765 36665555432 14578899999
Q ss_pred C------CCCeEEEEccCCcccc-ccccc----ChhhHHHHHHHHH
Q 013319 379 D------ALPAIVGWLSNGEKDV-LKTGI----SVKDQKSSIHELS 413 (445)
Q Consensus 379 ~------~~Ptlv~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~ 413 (445)
. ..|+++++.+++.... +.+.. +.+++...++.+.
T Consensus 111 ~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 111 LNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred CcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 8 8999999988776442 32322 4566766655544
No 488
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=85.86 E-value=0.15 Score=42.72 Aligned_cols=43 Identities=12% Similarity=-0.008 Sum_probs=25.2
Q ss_pred ChHHHHHcC--CCCCCeEEEEccCCcccccccccChhhHHHHHHH
Q 013319 369 SDPAVKKLG--VDALPAIVGWLSNGEKDVLKTGISVKDQKSSIHE 411 (445)
Q Consensus 369 ~~~l~~~f~--V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (445)
+..+.+.|+ +.++|+++++.+++.......+.+.+++.+.+..
T Consensus 101 ~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~l~~~l~~ 145 (159)
T 2ls5_A 101 GADIFAKYALRDAGITRNVLIDREGKIVKLTRLYNEEEFASLVQQ 145 (159)
Confidence 345666677 5569999988777664433334445455444443
No 489
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=85.57 E-value=3 Score=36.17 Aligned_cols=84 Identities=12% Similarity=0.053 Sum_probs=50.3
Q ss_pred CCCEEEEEe-cCCC--C---hHHHHHHHHHhhc-cceEEEEeecC------------------------CChHHHHHcCC
Q 013319 330 RLPSVLLLS-TKKE--T---PIIWRVLSGMYHE-RLNFYDTEVHD------------------------VSDPAVKKLGV 378 (445)
Q Consensus 330 ~~~~vvlF~-~~~~--~---~~~~~~lA~~~~~-~~~f~~~~v~~------------------------~~~~l~~~f~V 378 (445)
.++++|.|. .... + .+.+..+..+|.+ .+.++.++++. .+..+++.|+|
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 457777777 3322 2 3445556666654 35665554431 24578899999
Q ss_pred C-----CCCeEEEEccCCcccc-ccccc----ChhhHHHHHHHHH
Q 013319 379 D-----ALPAIVGWLSNGEKDV-LKTGI----SVKDQKSSIHELS 413 (445)
Q Consensus 379 ~-----~~Ptlv~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~ 413 (445)
. ..|+++++.+++.... +.+.. +.+++...++.+.
T Consensus 125 ~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 125 LNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp BCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 9 8999998988776443 32322 4466655555443
No 490
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=85.50 E-value=0.88 Score=36.87 Aligned_cols=57 Identities=16% Similarity=0.310 Sum_probs=36.0
Q ss_pred EEEEEECCCCccCCChhHHHHHHHHhc-CccEEEEEeCccchh----hHhHh--------CCccCCCcEEEE
Q 013319 220 WLLFFYSPSSNRDGYESVIEEVANSME-GALKVGSINCETEAS----LCKEL--------GVHRPRSPRIFA 278 (445)
Q Consensus 220 ~lV~Fyap~C~~C~~~p~~~~~a~~l~-~~v~~~~Vdc~~~~~----lc~~~--------~I~~~~~Pti~~ 278 (445)
+++.|.++.|+.|+....=..+-..|. ..|.|-.+|++.++. +.++. |...+ |.|++
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tv--PQIFi 70 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLP--PQIFN 70 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCS--CEEEE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCCCcCC--CEEEE
Confidence 367788999999953111122223333 268899999987643 34455 66677 88776
No 491
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=85.14 E-value=1.4 Score=37.97 Aligned_cols=52 Identities=10% Similarity=0.057 Sum_probs=39.4
Q ss_pred cEEEEEEE-CCCCccCCC-hhHHHHHHHHhcC-ccE-EEEEeCccc---hhhHhHhCCc
Q 013319 218 MTWLLFFY-SPSSNRDGY-ESVIEEVANSMEG-ALK-VGSINCETE---ASLCKELGVH 269 (445)
Q Consensus 218 ~~~lV~Fy-ap~C~~C~~-~p~~~~~a~~l~~-~v~-~~~Vdc~~~---~~lc~~~~I~ 269 (445)
+.+++.|| ..||+.|.. .+.|.+.+.+++. .+. +..|.++.. ...|+++++.
T Consensus 43 k~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~~ 101 (171)
T 2xhf_A 43 RKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDPE 101 (171)
T ss_dssp SEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCTT
T ss_pred CeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCC
Confidence 33455555 458999999 9999999998874 564 888888874 4678888873
No 492
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=83.73 E-value=2.9 Score=36.33 Aligned_cols=85 Identities=12% Similarity=0.132 Sum_probs=51.7
Q ss_pred CCCCEEEEEe-cCCC--C---hHHHHHHHHHhhcc-ceEEEEeecC---------------------------CChHHHH
Q 013319 329 ARLPSVLLLS-TKKE--T---PIIWRVLSGMYHER-LNFYDTEVHD---------------------------VSDPAVK 374 (445)
Q Consensus 329 ~~~~~vvlF~-~~~~--~---~~~~~~lA~~~~~~-~~f~~~~v~~---------------------------~~~~l~~ 374 (445)
..++++|.|. .... + .+.+.++..+|.++ +.++.++++. .+..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3467788887 3322 1 45566666666543 5555454431 1457899
Q ss_pred HcCCC-----CCCeEEEEccCCccc-cccccc----ChhhHHHHHHHHH
Q 013319 375 KLGVD-----ALPAIVGWLSNGEKD-VLKTGI----SVKDQKSSIHELS 413 (445)
Q Consensus 375 ~f~V~-----~~Ptlv~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~ 413 (445)
.|+|. ..|+++++.+++... .+.+.. +.+++...++.+.
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99998 899999898877644 232322 3456655555443
No 493
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=82.76 E-value=1.4 Score=34.45 Aligned_cols=16 Identities=13% Similarity=0.275 Sum_probs=13.9
Q ss_pred hHHHHHcCCCCCCeEE
Q 013319 370 DPAVKKLGVDALPAIV 385 (445)
Q Consensus 370 ~~l~~~f~V~~~Ptlv 385 (445)
..++++|+|..+|+++
T Consensus 63 ~~l~~~~~v~~~Pt~~ 78 (116)
T 2e7p_A 63 SALAHWTGRGTVPNVF 78 (116)
T ss_dssp HHHHHHHSCCSSCEEE
T ss_pred HHHHHHhCCCCcCEEE
Confidence 4699999999999993
No 494
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=82.02 E-value=4 Score=34.00 Aligned_cols=30 Identities=7% Similarity=0.007 Sum_probs=18.0
Q ss_pred CCCCeEEEEccCCccc-cccccc--ChhhHHHHH
Q 013319 379 DALPAIVGWLSNGEKD-VLKTGI--SVKDQKSSI 409 (445)
Q Consensus 379 ~~~Ptlv~~~~~~~~~-~~~~~~--~~~~~~~~~ 409 (445)
...|+++++. ++... .+.+.. +.+++.+.+
T Consensus 136 ~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l 168 (172)
T 2k6v_A 136 DHTATTFVVK-EGRLVLLYSPDKAEATDRVVADL 168 (172)
T ss_dssp EECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHH
T ss_pred ecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHH
Confidence 4679999998 77643 343333 445554443
No 495
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=82.01 E-value=12 Score=31.96 Aligned_cols=38 Identities=11% Similarity=0.039 Sum_probs=23.3
Q ss_pred CCCCEEEEEecCCCC-----hHHHHHHHHHhhcc-ceEEEEeec
Q 013319 329 ARLPSVLLLSTKKET-----PIIWRVLSGMYHER-LNFYDTEVH 366 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~-----~~~~~~lA~~~~~~-~~f~~~~v~ 366 (445)
..++++|.|...... .+.+.++..+|.++ +.++.+.++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 90 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCN 90 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcC
Confidence 456788888654322 34566677777665 677655543
No 496
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=81.91 E-value=12 Score=30.93 Aligned_cols=65 Identities=11% Similarity=0.040 Sum_probs=43.3
Q ss_pred CCCCEEEEEecCCCC------hHHHHHHHHHhhccceEEEEeecC----------------------CChHHHHHcCCCC
Q 013319 329 ARLPSVLLLSTKKET------PIIWRVLSGMYHERLNFYDTEVHD----------------------VSDPAVKKLGVDA 380 (445)
Q Consensus 329 ~~~~~vvlF~~~~~~------~~~~~~lA~~~~~~~~f~~~~v~~----------------------~~~~l~~~f~V~~ 380 (445)
..++++|.|.....+ .+.+.++..+| ..+.++.++++. .+..+++.|+|..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 356788888765422 34566777777 566665555442 2356888899886
Q ss_pred ------CCeEEEEccCCccc
Q 013319 381 ------LPAIVGWLSNGEKD 394 (445)
Q Consensus 381 ------~Ptlv~~~~~~~~~ 394 (445)
.|+.+++.+++...
T Consensus 122 ~~~g~~~p~~~lid~~G~i~ 141 (167)
T 2jsy_A 122 KELRLLARSVFVLDENGKVV 141 (167)
T ss_dssp TTTCSBCCEEEEECTTSCEE
T ss_pred ccCCceeeEEEEEcCCCcEE
Confidence 39999888877644
No 497
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=80.88 E-value=1.9 Score=45.51 Aligned_cols=48 Identities=8% Similarity=0.204 Sum_probs=37.7
Q ss_pred CCCcCcccccCCCCCCCH--HHHHHHHHHHHHhhCCCCCCChHHHHHHHHHHHHHHH
Q 013319 27 AKTVDLYKVLGVERNASQ--REIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDI 81 (445)
Q Consensus 27 ~~~~d~y~vLgv~~~a~~--~~ik~ayr~l~~~~hPd~~~~~~~~~~f~~i~~Ay~~ 81 (445)
....|||.+||++.+... .+|+++||++++..+++ .+++..+..|..+
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 445669999999766654 67999999999976555 5688888888875
No 498
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=79.41 E-value=7.4 Score=32.74 Aligned_cols=38 Identities=13% Similarity=0.243 Sum_probs=26.4
Q ss_pred hHHHHHcCCCCCCeEEEEccCCcccccccccChhhHHHHHHHH
Q 013319 370 DPAVKKLGVDALPAIVGWLSNGEKDVLKTGISVKDQKSSIHEL 412 (445)
Q Consensus 370 ~~l~~~f~V~~~Ptlv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (445)
..+++++||.+.||+++ ++. .+.+..+.+++...+...
T Consensus 134 ~~~a~~~gv~gtPt~~i---~g~--~~~G~~~~~~l~~~i~~~ 171 (175)
T 3gyk_A 134 MALAQKLGFNGTPSFVV---EDA--LVPGFVEQSQLQDAVDRA 171 (175)
T ss_dssp HHHHHHHTCCSSSEEEE---TTE--EECSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEE---CCE--EeeCCCCHHHHHHHHHHH
Confidence 34678899999999985 332 555666667776666544
No 499
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=79.28 E-value=4.3 Score=29.46 Aligned_cols=51 Identities=14% Similarity=0.239 Sum_probs=32.5
Q ss_pred EEEEecCCCC-----hHHHHHHHHHhhccceEEEEeecCC---ChHHHHHcC--CCCCCeEE
Q 013319 334 VLLLSTKKET-----PIIWRVLSGMYHERLNFYDTEVHDV---SDPAVKKLG--VDALPAIV 385 (445)
Q Consensus 334 vvlF~~~~~~-----~~~~~~lA~~~~~~~~f~~~~v~~~---~~~l~~~f~--V~~~Ptlv 385 (445)
+++|+...-+ .+.+..++..+. .+.|..+++... .+++.++++ +..+|+|+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~-~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~ 63 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD-DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIF 63 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS-SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC-CceEEEEecccChHHHHHHHHHhCCCCceeCeEE
Confidence 5666654322 345666666554 367766655432 147999999 99999985
No 500
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=78.55 E-value=6.1 Score=30.98 Aligned_cols=66 Identities=15% Similarity=0.214 Sum_probs=47.8
Q ss_pred CCC--hhHHHHHHHHhc----CccEEEEEeCccch----------hhHhHhCCccCCCcEEEEeccCCCCCCCeeeecCc
Q 013319 232 DGY--ESVIEEVANSME----GALKVGSINCETEA----------SLCKELGVHRPRSPRIFAYSYKAGDKGSLVEYNEH 295 (445)
Q Consensus 232 C~~--~p~~~~~a~~l~----~~v~~~~Vdc~~~~----------~lc~~~~I~~~~~Pti~~f~~~~~~~g~~~~y~g~ 295 (445)
|-. .|+...++..+. ..+.+.+.|...++ ++.+++|+... |.+++ +|+++..-.-
T Consensus 21 CG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~L--P~~~V-------DGevv~~G~y 91 (106)
T 3ktb_A 21 CGTNINPELMRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADAL--PITLV-------DGEIAVSQTY 91 (106)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGC--SEEEE-------TTEEEECSSC
T ss_pred cCCCCCHHHHHHHHHHHHHHHCCCEEEEEccccChHHHhcCHHHHHHHHHcCcccC--CEEEE-------CCEEEEeccC
Confidence 654 677766666554 26899999999886 56778999999 98887 4554444333
Q ss_pred ccHHHHHHHHH
Q 013319 296 LVAKNLKSFCR 306 (445)
Q Consensus 296 ~~~~~l~~fi~ 306 (445)
.+.++|.+|+.
T Consensus 92 Pt~eEl~~~lg 102 (106)
T 3ktb_A 92 PTTKQMSEWTG 102 (106)
T ss_dssp CCHHHHHHHHC
T ss_pred CCHHHHHHHhC
Confidence 57899999873
Done!