Query 013321
Match_columns 445
No_of_seqs 214 out of 1639
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 08:23:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013321.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013321hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kya_A Putative phosphatase; s 99.9 3.6E-21 1.2E-25 203.6 17.2 151 21-173 310-480 (496)
2 4hw6_A Hypothetical protein, I 99.8 5.3E-19 1.8E-23 182.9 19.4 146 21-167 273-432 (433)
3 3hrp_A Uncharacterized protein 99.8 5.8E-18 2E-22 173.1 19.4 139 21-167 266-409 (409)
4 3tc9_A Hypothetical hydrolase; 99.8 2.9E-18 9.9E-23 177.0 16.3 144 21-167 270-429 (430)
5 3fvz_A Peptidyl-glycine alpha- 99.6 5.1E-14 1.8E-18 137.6 22.0 139 19-171 89-231 (329)
6 3tc9_A Hypothetical hydrolase; 99.6 1.2E-14 4E-19 150.0 16.5 131 20-170 225-373 (430)
7 4hw6_A Hypothetical protein, I 99.6 1.7E-14 5.8E-19 149.2 17.7 132 20-170 227-376 (433)
8 3kya_A Putative phosphatase; s 99.6 8.7E-15 3E-19 154.9 15.3 134 21-170 247-412 (496)
9 3hrp_A Uncharacterized protein 99.5 1.1E-13 3.7E-18 141.5 18.3 133 19-168 217-354 (409)
10 3fvz_A Peptidyl-glycine alpha- 99.5 4E-13 1.4E-17 131.3 19.6 145 20-188 23-206 (329)
11 3v64_C Agrin; beta propeller, 99.5 1.2E-12 4E-17 131.0 20.1 140 21-193 116-261 (349)
12 3v65_B Low-density lipoprotein 99.5 2.1E-12 7.1E-17 130.9 20.1 139 21-193 159-304 (386)
13 3p5b_L Low density lipoprotein 99.5 1.8E-12 6.1E-17 132.3 18.7 138 21-192 159-305 (400)
14 1ijq_A LDL receptor, low-densi 99.5 2.5E-12 8.6E-17 126.5 19.0 139 21-192 77-223 (316)
15 3sov_A LRP-6, low-density lipo 99.5 2.6E-12 9E-17 127.5 19.2 134 21-188 79-219 (318)
16 3v64_C Agrin; beta propeller, 99.4 1.2E-11 4.3E-16 123.6 21.8 144 7-187 62-212 (349)
17 1q7f_A NHL, brain tumor CG1071 99.4 1.1E-11 3.6E-16 116.9 20.1 137 21-188 121-261 (286)
18 3m0c_C LDL receptor, low-densi 99.4 4.4E-12 1.5E-16 141.0 19.0 138 21-192 471-617 (791)
19 1npe_A Nidogen, entactin; glyc 99.4 1.1E-11 3.7E-16 117.1 18.7 134 21-188 79-219 (267)
20 3s94_A LRP-6, low-density lipo 99.4 1E-11 3.4E-16 134.3 20.5 138 21-192 392-536 (619)
21 3v65_B Low-density lipoprotein 99.4 1.8E-11 6.3E-16 124.0 21.0 133 21-187 116-255 (386)
22 1ijq_A LDL receptor, low-densi 99.4 2.2E-11 7.7E-16 119.6 20.3 126 6-167 107-237 (316)
23 1npe_A Nidogen, entactin; glyc 99.4 2.6E-11 8.9E-16 114.5 19.4 134 21-188 36-177 (267)
24 4a0p_A LRP6, LRP-6, low-densit 99.4 1.7E-11 5.8E-16 132.8 20.4 138 21-193 80-223 (628)
25 3sov_A LRP-6, low-density lipo 99.4 3E-11 1E-15 119.8 19.9 131 20-186 121-258 (318)
26 1q7f_A NHL, brain tumor CG1071 99.4 5.4E-11 1.8E-15 112.1 20.1 136 21-188 77-217 (286)
27 3p5b_L Low density lipoprotein 99.3 5E-11 1.7E-15 121.6 20.4 138 20-188 111-256 (400)
28 3m0c_C LDL receptor, low-densi 99.3 7.4E-11 2.5E-15 131.2 20.9 138 20-188 423-568 (791)
29 4a0p_A LRP6, LRP-6, low-densit 99.3 4.9E-11 1.7E-15 129.1 19.0 139 20-192 388-534 (628)
30 1rwi_B Serine/threonine-protei 99.3 6.2E-11 2.1E-15 109.9 16.9 134 21-187 108-243 (270)
31 3s94_A LRP-6, low-density lipo 99.3 3.6E-11 1.2E-15 130.0 17.0 134 21-188 84-224 (619)
32 2qc5_A Streptogramin B lactona 99.3 3.9E-10 1.3E-14 105.1 21.3 135 20-187 145-281 (300)
33 1rwi_B Serine/threonine-protei 99.3 4.3E-11 1.5E-15 111.1 13.7 115 21-168 150-264 (270)
34 1n7d_A LDL receptor, low-densi 99.2 3.7E-11 1.2E-15 131.5 11.7 134 21-188 453-595 (699)
35 2qc5_A Streptogramin B lactona 99.2 1.6E-09 5.3E-14 101.1 21.2 135 20-187 103-239 (300)
36 2fp8_A Strictosidine synthase; 99.2 1.5E-10 5.2E-15 112.4 14.5 135 21-189 80-240 (322)
37 2z2n_A Virginiamycin B lyase; 99.2 2.8E-09 9.6E-14 99.3 21.0 133 20-185 140-274 (299)
38 3e5z_A Putative gluconolactona 99.1 1.8E-09 6.1E-14 102.5 17.9 148 6-189 16-183 (296)
39 2p4o_A Hypothetical protein; p 99.1 2.7E-09 9.2E-14 103.3 19.1 113 20-168 31-147 (306)
40 2z2n_A Virginiamycin B lyase; 99.1 8.1E-09 2.8E-13 96.1 21.2 135 20-187 98-234 (299)
41 1n7d_A LDL receptor, low-densi 99.1 3.7E-10 1.3E-14 123.6 13.7 127 6-168 483-614 (699)
42 2fp8_A Strictosidine synthase; 99.1 7.3E-10 2.5E-14 107.5 14.2 118 21-169 185-314 (322)
43 3dr2_A Exported gluconolactona 99.0 4.2E-09 1.4E-13 101.4 16.3 145 7-188 34-198 (305)
44 3e5z_A Putative gluconolactona 99.0 9.7E-09 3.3E-13 97.4 17.0 137 21-189 69-229 (296)
45 3dr2_A Exported gluconolactona 99.0 1.3E-08 4.3E-13 98.0 17.9 136 21-190 86-251 (305)
46 2p4o_A Hypothetical protein; p 99.0 1.5E-08 5.3E-13 98.0 18.2 143 21-189 72-223 (306)
47 3g4e_A Regucalcin; six bladed 99.0 1.7E-08 5.9E-13 96.9 17.8 113 21-168 98-229 (297)
48 2ism_A Putative oxidoreductase 99.0 1.1E-08 3.8E-13 102.3 17.1 133 6-168 19-178 (352)
49 3a9g_A Putative uncharacterize 99.0 1.3E-08 4.4E-13 102.3 17.0 151 5-187 16-206 (354)
50 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 5.7E-08 2E-12 91.7 14.8 139 21-186 18-180 (314)
51 2ism_A Putative oxidoreductase 98.8 7.7E-08 2.6E-12 96.2 16.3 133 21-166 75-239 (352)
52 2qe8_A Uncharacterized protein 98.8 1E-07 3.4E-12 93.7 16.3 132 10-169 9-155 (343)
53 3g4e_A Regucalcin; six bladed 98.8 5.1E-08 1.7E-12 93.6 13.8 134 21-188 54-209 (297)
54 2qe8_A Uncharacterized protein 98.8 1.5E-07 5.3E-12 92.3 16.5 157 20-189 66-259 (343)
55 3dsm_A Uncharacterized protein 98.8 9.9E-08 3.4E-12 93.3 14.9 134 20-186 171-320 (328)
56 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 8.6E-08 2.9E-12 90.4 13.4 113 21-167 117-255 (314)
57 3dsm_A Uncharacterized protein 98.7 4.3E-07 1.5E-11 88.8 18.3 135 20-187 83-234 (328)
58 2dg1_A DRP35, lactonase; beta 98.7 1.8E-07 6.2E-12 89.6 14.9 122 20-170 134-265 (333)
59 2dg1_A DRP35, lactonase; beta 98.7 7.1E-07 2.4E-11 85.4 18.9 117 21-170 45-173 (333)
60 2g8s_A Glucose/sorbosone dehyd 98.7 1.5E-07 5E-12 94.3 14.6 139 3-169 3-174 (353)
61 2p9w_A MAL S 1 allergenic prot 98.7 4.2E-07 1.4E-11 91.7 17.5 137 21-169 63-216 (334)
62 3a9g_A Putative uncharacterize 98.6 4.2E-07 1.4E-11 91.2 15.6 126 21-166 73-229 (354)
63 1cru_A Protein (soluble quinop 98.6 7.9E-07 2.7E-11 92.6 18.2 126 4-155 13-161 (454)
64 3sre_A PON1, serum paraoxonase 98.6 6E-07 2E-11 91.2 14.2 134 21-187 112-275 (355)
65 3das_A Putative oxidoreductase 98.6 2.1E-06 7.2E-11 86.9 17.7 154 6-187 20-211 (347)
66 3no2_A Uncharacterized protein 98.5 3.5E-06 1.2E-10 81.2 18.3 119 22-170 78-198 (276)
67 2ghs_A AGR_C_1268P; regucalcin 98.5 3E-06 1E-10 82.7 16.0 114 21-170 134-262 (326)
68 3sre_A PON1, serum paraoxonase 98.5 1.1E-07 3.8E-12 96.5 5.8 113 19-167 163-297 (355)
69 3no2_A Uncharacterized protein 98.5 3.9E-06 1.3E-10 80.8 16.3 120 21-170 125-255 (276)
70 2p9w_A MAL S 1 allergenic prot 98.4 9.2E-07 3.1E-11 89.2 11.8 125 22-170 138-267 (334)
71 3hfq_A Uncharacterized protein 98.4 4.7E-06 1.6E-10 80.1 14.8 125 21-167 40-170 (347)
72 3hfq_A Uncharacterized protein 98.3 1.3E-05 4.5E-10 76.9 15.3 125 21-167 141-270 (347)
73 3das_A Putative oxidoreductase 98.3 1.4E-05 4.9E-10 80.8 15.9 126 21-166 80-233 (347)
74 2ghs_A AGR_C_1268P; regucalcin 98.3 1.6E-05 5.4E-10 77.5 15.4 112 21-167 90-209 (326)
75 2g8s_A Glucose/sorbosone dehyd 98.2 8.9E-06 3E-10 81.3 13.5 141 21-169 130-309 (353)
76 3vgz_A Uncharacterized protein 98.2 9.1E-05 3.1E-09 70.2 17.7 142 21-189 41-196 (353)
77 3vgz_A Uncharacterized protein 98.1 0.00026 8.9E-09 67.0 20.5 134 22-187 142-281 (353)
78 3u4y_A Uncharacterized protein 98.1 0.00015 5E-09 68.6 18.2 130 20-176 175-312 (331)
79 2iwa_A Glutamine cyclotransfer 98.1 0.00014 4.7E-09 70.9 17.8 115 22-171 67-184 (266)
80 2iwa_A Glutamine cyclotransfer 98.1 9.9E-05 3.4E-09 72.0 16.7 112 21-170 21-137 (266)
81 4a9v_A PHOX; hydrolase, beta-p 98.1 3E-05 1E-09 83.3 14.0 120 21-155 384-549 (592)
82 3scy_A Hypothetical bacterial 98.1 0.00013 4.3E-09 70.6 16.8 120 20-167 210-336 (361)
83 3scy_A Hypothetical bacterial 98.0 0.00026 8.7E-09 68.4 18.1 119 22-167 156-290 (361)
84 1ri6_A Putative isomerase YBHE 97.9 0.001 3.5E-08 62.3 20.5 121 20-167 177-307 (343)
85 1cru_A Protein (soluble quinop 97.9 9.1E-05 3.1E-09 77.0 13.0 122 21-159 77-249 (454)
86 3qqz_A Putative uncharacterize 97.8 9.7E-05 3.3E-09 71.6 11.2 79 21-110 173-252 (255)
87 3u4y_A Uncharacterized protein 97.7 0.0007 2.4E-08 63.9 15.6 112 21-168 41-160 (331)
88 3nol_A Glutamine cyclotransfer 97.7 0.0019 6.4E-08 63.0 18.8 112 23-171 89-204 (262)
89 3qqz_A Putative uncharacterize 97.7 0.00067 2.3E-08 65.6 15.4 126 23-168 123-253 (255)
90 1l0q_A Surface layer protein; 97.7 0.0028 9.7E-08 61.1 19.9 113 22-172 75-193 (391)
91 1ri6_A Putative isomerase YBHE 97.7 0.00085 2.9E-08 62.9 15.3 117 21-168 38-160 (343)
92 3mbr_X Glutamine cyclotransfer 97.7 0.0034 1.2E-07 60.5 19.1 112 23-171 67-182 (243)
93 3nok_A Glutaminyl cyclase; bet 97.7 0.0011 3.9E-08 64.7 16.0 112 23-171 98-213 (268)
94 1jof_A Carboxy-CIS,CIS-muconat 97.6 0.0019 6.6E-08 63.1 17.0 131 20-167 144-290 (365)
95 1l0q_A Surface layer protein; 97.6 0.0046 1.6E-07 59.7 18.7 113 21-171 32-150 (391)
96 3mbr_X Glutamine cyclotransfer 97.5 0.0016 5.5E-08 62.8 14.4 109 21-169 21-134 (243)
97 1jmx_B Amine dehydrogenase; ox 97.4 0.0013 4.6E-08 61.8 12.4 117 23-168 2-134 (349)
98 3nok_A Glutaminyl cyclase; bet 97.4 0.0021 7E-08 62.9 13.4 106 23-169 57-165 (268)
99 3nol_A Glutamine cyclotransfer 97.4 0.0019 6.6E-08 62.9 13.1 106 24-169 46-156 (262)
100 1pby_B Quinohemoprotein amine 97.3 0.0039 1.3E-07 58.1 14.4 113 22-169 35-164 (337)
101 1jmx_B Amine dehydrogenase; ox 97.3 0.0059 2E-07 57.4 15.1 77 22-110 44-133 (349)
102 1nir_A Nitrite reductase; hemo 97.3 0.01 3.5E-07 62.4 18.4 142 22-187 180-333 (543)
103 2mad_H Methylamine dehydrogena 97.2 0.0072 2.5E-07 60.6 16.3 79 20-111 66-156 (373)
104 1jof_A Carboxy-CIS,CIS-muconat 97.2 0.0037 1.3E-07 61.0 13.6 133 20-169 192-342 (365)
105 2wg3_C Hedgehog-interacting pr 97.2 0.0097 3.3E-07 62.1 17.0 160 6-188 2-227 (463)
106 3bws_A Protein LP49; two-domai 97.2 0.0093 3.2E-07 58.3 15.7 109 22-168 304-432 (433)
107 3c75_H MADH, methylamine dehyd 97.1 0.0042 1.4E-07 64.2 13.0 78 20-111 118-209 (426)
108 3bws_A Protein LP49; two-domai 97.1 0.0096 3.3E-07 58.2 14.8 136 21-186 123-262 (433)
109 2mad_H Methylamine dehydrogena 96.9 0.039 1.3E-06 55.2 18.0 48 138-186 319-370 (373)
110 3sjl_D Methylamine dehydrogena 96.9 0.0082 2.8E-07 61.4 12.7 113 29-172 41-173 (386)
111 3c75_H MADH, methylamine dehyd 96.7 0.01 3.5E-07 61.3 12.3 108 33-172 86-213 (426)
112 3zwu_A Alkaline phosphatase PH 96.7 0.011 3.9E-07 63.6 12.9 98 20-117 383-526 (592)
113 1nir_A Nitrite reductase; hemo 96.7 0.0089 3E-07 62.9 11.5 106 27-171 144-260 (543)
114 1mda_H Methylamine dehydrogena 96.6 0.0063 2.2E-07 61.6 9.9 82 20-115 65-162 (368)
115 1qks_A Cytochrome CD1 nitrite 96.6 0.045 1.5E-06 58.3 16.2 73 20-111 196-275 (567)
116 3sjl_D Methylamine dehydrogena 96.6 0.029 9.9E-07 57.3 14.1 116 20-161 78-212 (386)
117 2ece_A 462AA long hypothetical 96.5 0.03 1E-06 58.6 14.1 155 5-167 236-424 (462)
118 1tl2_A L10, protein (tachylect 96.5 0.039 1.3E-06 52.9 13.5 112 22-166 42-161 (236)
119 4a9v_A PHOX; hydrolase, beta-p 96.4 0.0073 2.5E-07 65.0 8.9 61 20-97 475-548 (592)
120 2oiz_A Aromatic amine dehydrog 96.4 0.051 1.7E-06 53.5 14.5 30 21-50 108-139 (361)
121 2oiz_A Aromatic amine dehydrog 96.4 0.034 1.2E-06 54.8 13.1 77 21-111 51-140 (361)
122 1fwx_A Nitrous oxide reductase 96.2 0.0062 2.1E-07 65.7 7.2 75 21-109 277-359 (595)
123 1mda_H Methylamine dehydrogena 96.2 0.032 1.1E-06 56.4 11.8 106 32-168 32-158 (368)
124 1qks_A Cytochrome CD1 nitrite 96.0 0.054 1.8E-06 57.7 13.1 103 28-169 163-276 (567)
125 1pby_B Quinohemoprotein amine 96.0 0.22 7.4E-06 46.1 15.8 125 33-186 2-143 (337)
126 2ece_A 462AA long hypothetical 96.0 0.11 3.7E-06 54.5 14.7 30 137-167 321-351 (462)
127 3hxj_A Pyrrolo-quinoline quino 95.9 0.14 4.7E-06 47.9 14.1 67 83-169 179-245 (330)
128 2wg3_C Hedgehog-interacting pr 95.8 0.054 1.8E-06 56.5 12.0 122 21-156 69-242 (463)
129 3amr_A 3-phytase; beta-propell 95.8 0.088 3E-06 53.3 12.9 78 19-111 178-263 (355)
130 3hxj_A Pyrrolo-quinoline quino 95.8 0.24 8.1E-06 46.3 15.1 70 82-169 216-285 (330)
131 3amr_A 3-phytase; beta-propell 95.7 0.99 3.4E-05 45.6 20.3 174 6-209 58-260 (355)
132 3q6k_A 43.2 kDa salivary prote 95.7 0.063 2.2E-06 54.8 11.6 106 21-156 220-342 (381)
133 3s25_A Hypothetical 7-bladed b 95.7 0.088 3E-06 51.5 12.0 109 25-176 108-224 (302)
134 3v9f_A Two-component system se 95.6 0.39 1.3E-05 52.0 18.1 159 21-220 495-655 (781)
135 1fwx_A Nitrous oxide reductase 95.6 0.17 5.7E-06 54.6 14.8 159 19-203 132-354 (595)
136 3s25_A Hypothetical 7-bladed b 95.1 0.38 1.3E-05 46.9 14.4 63 88-171 230-296 (302)
137 1gxr_A ESG1, transducin-like e 94.9 2.2 7.6E-05 39.0 19.4 113 22-171 185-299 (337)
138 1tl2_A L10, protein (tachylect 94.7 0.64 2.2E-05 44.5 14.2 112 24-171 91-213 (236)
139 1gxr_A ESG1, transducin-like e 94.5 2.7 9.3E-05 38.4 18.1 113 23-170 144-257 (337)
140 2ymu_A WD-40 repeat protein; u 94.4 2.8 9.4E-05 42.3 19.3 110 22-168 428-539 (577)
141 3q6k_A 43.2 kDa salivary prote 93.8 0.18 6.2E-06 51.5 9.0 64 22-99 276-342 (381)
142 3ow8_A WD repeat-containing pr 93.6 5 0.00017 38.0 20.5 115 22-172 166-283 (321)
143 3zwl_B Eukaryotic translation 93.5 1.2 4.3E-05 41.2 13.7 110 22-168 34-151 (369)
144 3iz6_a 40S ribosomal protein R 93.4 3.2 0.00011 40.1 17.1 122 22-168 251-375 (380)
145 4a2l_A BT_4663, two-component 93.3 2.5 8.7E-05 45.6 17.5 158 21-219 498-657 (795)
146 3ei3_B DNA damage-binding prot 92.9 5 0.00017 38.1 17.3 113 21-169 164-283 (383)
147 3ow8_A WD repeat-containing pr 92.9 6.5 0.00022 37.2 20.8 112 23-170 125-239 (321)
148 3v9f_A Two-component system se 92.6 2.5 8.4E-05 45.6 16.2 120 21-170 450-570 (781)
149 2aq5_A Coronin-1A; WD40 repeat 92.5 2.5 8.7E-05 40.8 14.8 116 22-170 178-301 (402)
150 1erj_A Transcriptional repress 92.4 3.3 0.00011 40.2 15.5 112 23-170 126-240 (393)
151 4ery_A WD repeat-containing pr 92.3 6.8 0.00023 36.1 18.1 114 23-171 110-226 (312)
152 4ery_A WD repeat-containing pr 92.2 7 0.00024 36.0 18.8 127 7-171 12-141 (312)
153 4gqb_B Methylosome protein 50; 92.2 2.2 7.4E-05 41.4 13.8 114 23-169 130-247 (344)
154 2ymu_A WD-40 repeat protein; u 91.7 12 0.00041 37.5 20.2 71 21-111 263-334 (577)
155 3ott_A Two-component system se 91.6 6 0.00021 42.4 17.7 152 22-220 473-625 (758)
156 2hqs_A Protein TOLB; TOLB, PAL 91.4 8.6 0.00029 38.0 17.6 71 22-111 224-300 (415)
157 1r5m_A SIR4-interacting protei 91.1 4.2 0.00015 38.4 14.4 81 22-111 47-139 (425)
158 4aow_A Guanine nucleotide-bind 91.1 5 0.00017 36.8 14.5 119 22-167 217-336 (340)
159 4g56_B MGC81050 protein; prote 91.0 2.7 9.2E-05 40.6 13.0 114 23-169 142-259 (357)
160 1vyh_C Platelet-activating fac 91.0 3.3 0.00011 40.7 13.9 116 22-171 110-226 (410)
161 1got_B GT-beta; complex (GTP-b 90.9 11 0.00037 35.6 20.1 116 22-169 186-302 (340)
162 1sq9_A Antiviral protein SKI8; 90.8 10 0.00036 35.7 16.9 132 21-170 187-324 (397)
163 2aq5_A Coronin-1A; WD40 repeat 90.7 6.6 0.00023 37.8 15.5 73 22-110 83-162 (402)
164 3mmy_A MRNA export factor; mRN 90.6 5.7 0.00019 36.6 14.4 116 21-169 40-161 (368)
165 1vyh_C Platelet-activating fac 90.4 4.8 0.00016 39.5 14.4 113 23-171 153-268 (410)
166 3ei3_B DNA damage-binding prot 90.4 12 0.00042 35.4 17.9 113 22-168 120-236 (383)
167 1got_B GT-beta; complex (GTP-b 90.3 5.5 0.00019 37.7 14.4 73 22-110 228-300 (340)
168 4a2l_A BT_4663, two-component 90.2 5 0.00017 43.3 15.6 122 21-171 406-529 (795)
169 2ynn_A Coatomer subunit beta'; 90.2 8 0.00027 35.9 15.2 110 22-168 15-128 (304)
170 1k8k_C P40, ARP2/3 complex 41 90.2 2.5 8.5E-05 39.5 11.6 115 22-168 10-127 (372)
171 3zwl_B Eukaryotic translation 90.1 9.6 0.00033 35.1 15.5 110 22-168 220-346 (369)
172 1r5m_A SIR4-interacting protei 90.0 4.8 0.00016 38.0 13.6 109 22-168 249-361 (425)
173 1sq9_A Antiviral protein SKI8; 89.7 8.3 0.00028 36.4 15.0 83 22-110 235-321 (397)
174 2z3z_A Dipeptidyl aminopeptida 89.5 19 0.00064 37.5 18.9 119 21-170 258-393 (706)
175 4e54_B DNA damage-binding prot 89.5 5.8 0.0002 39.0 14.2 81 10-109 199-280 (435)
176 2pbi_B Guanine nucleotide-bind 88.8 5.8 0.0002 38.0 13.4 108 23-164 243-353 (354)
177 2xyi_A Probable histone-bindin 88.7 5.8 0.0002 39.0 13.6 113 22-168 233-353 (430)
178 3vl1_A 26S proteasome regulato 88.5 17 0.00059 34.5 16.6 72 21-110 140-211 (420)
179 3zwu_A Alkaline phosphatase PH 88.5 1.4 4.8E-05 47.4 9.4 61 20-97 475-548 (592)
180 2xyi_A Probable histone-bindin 88.5 7.8 0.00027 38.1 14.3 122 21-169 129-264 (430)
181 3frx_A Guanine nucleotide-bind 88.5 6.6 0.00023 36.9 13.3 116 22-167 198-316 (319)
182 4e54_B DNA damage-binding prot 88.2 4.7 0.00016 39.7 12.5 115 22-168 166-282 (435)
183 2vdu_B TRNA (guanine-N(7)-)-me 87.9 7.2 0.00025 38.4 13.7 117 21-169 150-272 (450)
184 3vu4_A KMHSV2; beta-propeller 87.5 16 0.00054 34.9 15.5 125 22-167 197-335 (355)
185 4aez_A CDC20, WD repeat-contai 86.7 23 0.00079 34.0 18.0 29 22-50 136-164 (401)
186 2pm9_A Protein WEB1, protein t 86.6 14 0.00048 35.0 14.5 120 21-169 166-295 (416)
187 1erj_A Transcriptional repress 86.6 24 0.00081 34.0 17.4 117 22-168 167-287 (393)
188 4a11_B DNA excision repair pro 86.3 21 0.00073 33.3 17.4 87 22-110 188-275 (408)
189 2ecf_A Dipeptidyl peptidase IV 86.2 21 0.00073 37.2 16.9 87 20-111 36-138 (741)
190 3mmy_A MRNA export factor; mRN 86.1 14 0.00047 34.0 13.7 70 22-110 88-159 (368)
191 4aez_A CDC20, WD repeat-contai 85.9 25 0.00087 33.7 16.2 71 22-110 219-292 (401)
192 3vl1_A 26S proteasome regulato 85.8 17 0.00059 34.5 14.7 109 27-171 104-215 (420)
193 3f3f_A Nucleoporin SEH1; struc 85.4 17 0.00058 32.7 13.8 71 22-109 13-88 (351)
194 3mkq_A Coatomer beta'-subunit; 85.3 16 0.00055 38.4 15.5 70 22-110 15-85 (814)
195 3o4h_A Acylamino-acid-releasin 85.3 9.9 0.00034 38.8 13.5 115 24-166 153-274 (582)
196 1yfq_A Cell cycle arrest prote 85.3 6.2 0.00021 36.3 10.9 112 22-168 13-131 (342)
197 2ynn_A Coatomer subunit beta'; 85.1 16 0.00054 33.9 13.7 68 23-109 58-126 (304)
198 3fm0_A Protein CIAO1; WDR39,SG 85.0 7.9 0.00027 36.8 11.8 112 22-168 18-136 (345)
199 3k26_A Polycomb protein EED; W 84.9 19 0.00065 33.0 14.1 115 22-168 71-192 (366)
200 1nr0_A Actin interacting prote 84.7 4.2 0.00014 42.3 10.4 74 83-169 494-568 (611)
201 3sfz_A APAF-1, apoptotic pepti 84.7 42 0.0014 37.5 19.2 71 22-110 617-687 (1249)
202 3dm0_A Maltose-binding peripla 84.3 43 0.0015 35.0 18.4 70 23-111 433-503 (694)
203 3lrv_A PRE-mRNA-splicing facto 83.9 27 0.00091 32.7 15.0 115 22-168 172-292 (343)
204 1pgu_A Actin interacting prote 83.8 33 0.0011 34.2 16.4 75 21-110 161-237 (615)
205 4h5i_A Guanine nucleotide-exch 83.8 4.5 0.00015 39.2 9.6 70 22-108 271-340 (365)
206 3fm0_A Protein CIAO1; WDR39,SG 83.8 23 0.00078 33.5 14.5 112 22-166 107-223 (345)
207 3mkq_A Coatomer beta'-subunit; 83.3 40 0.0014 35.3 17.4 72 22-110 142-216 (814)
208 4h5i_A Guanine nucleotide-exch 83.1 8.6 0.0003 37.1 11.3 70 83-169 272-344 (365)
209 3lrv_A PRE-mRNA-splicing facto 83.0 31 0.001 32.3 17.2 115 22-171 127-247 (343)
210 2pm9_A Protein WEB1, protein t 83.0 32 0.0011 32.4 16.4 115 22-170 216-339 (416)
211 3dw8_B Serine/threonine-protei 82.6 23 0.00078 33.9 14.1 141 21-169 227-374 (447)
212 2ojh_A Uncharacterized protein 82.5 25 0.00085 30.8 19.5 73 22-111 43-119 (297)
213 3v7d_B Cell division control p 82.4 38 0.0013 32.9 17.2 114 22-173 312-426 (464)
214 2vdu_B TRNA (guanine-N(7)-)-me 82.1 40 0.0014 32.9 17.2 122 22-171 104-232 (450)
215 3dwl_C Actin-related protein 2 82.0 13 0.00043 35.0 11.8 114 22-168 57-177 (377)
216 3odt_A Protein DOA1; ubiquitin 81.7 29 0.00098 31.1 14.7 109 22-169 186-297 (313)
217 3azo_A Aminopeptidase; POP fam 81.3 52 0.0018 33.8 17.6 73 23-110 190-273 (662)
218 3dwl_C Actin-related protein 2 81.2 14 0.00048 34.7 11.8 132 22-171 102-239 (377)
219 4g56_B MGC81050 protein; prote 80.7 24 0.00082 33.7 13.5 113 22-168 228-343 (357)
220 3dm0_A Maltose-binding peripla 80.4 59 0.002 33.9 17.7 118 23-173 475-597 (694)
221 4gqb_B Methylosome protein 50; 80.1 43 0.0015 32.0 17.4 73 22-110 171-245 (344)
222 3sfz_A APAF-1, apoptotic pepti 80.1 80 0.0027 35.2 19.2 69 22-108 842-910 (1249)
223 3jrp_A Fusion protein of prote 80.0 16 0.00056 33.7 11.6 71 22-109 13-86 (379)
224 1k8k_C P40, ARP2/3 complex 41 80.0 37 0.0013 31.3 19.6 75 21-109 97-171 (372)
225 4aow_A Guanine nucleotide-bind 79.8 35 0.0012 30.9 15.4 75 22-111 40-117 (340)
226 2hqs_A Protein TOLB; TOLB, PAL 79.6 49 0.0017 32.4 21.0 71 22-111 180-256 (415)
227 2z3z_A Dipeptidyl aminopeptida 79.1 50 0.0017 34.2 16.3 65 22-109 83-148 (706)
228 1nr0_A Actin interacting prote 78.7 47 0.0016 34.3 15.8 123 22-171 149-273 (611)
229 3azo_A Aminopeptidase; POP fam 78.7 63 0.0022 33.2 19.2 79 22-111 243-325 (662)
230 2ojh_A Uncharacterized protein 78.6 33 0.0011 30.0 17.1 29 83-111 131-162 (297)
231 1pgu_A Actin interacting prote 78.5 44 0.0015 33.3 15.1 74 22-110 208-282 (615)
232 4a11_B DNA excision repair pro 78.1 41 0.0014 31.3 13.9 85 22-111 45-131 (408)
233 2ecf_A Dipeptidyl peptidase IV 78.1 19 0.00064 37.7 12.6 69 23-111 111-181 (741)
234 1yfq_A Cell cycle arrest prote 77.3 43 0.0015 30.5 15.0 124 21-171 151-285 (342)
235 2xzm_R RACK1; ribosome, transl 75.9 52 0.0018 30.8 17.9 70 23-111 79-149 (343)
236 3iz6_a 40S ribosomal protein R 75.5 58 0.002 31.1 22.6 122 22-171 207-332 (380)
237 3k26_A Polycomb protein EED; W 75.3 24 0.00083 32.3 11.3 76 21-111 116-192 (366)
238 3v7d_B Cell division control p 74.4 65 0.0022 31.1 15.6 67 27-111 275-342 (464)
239 1xfd_A DIP, dipeptidyl aminope 74.0 9.4 0.00032 39.8 8.9 75 21-111 17-100 (723)
240 2hes_X YDR267CP; beta-propelle 73.1 56 0.0019 30.5 13.4 73 22-109 109-182 (330)
241 3i2n_A WD repeat-containing pr 72.9 36 0.0012 31.0 11.8 109 28-168 176-291 (357)
242 3gre_A Serine/threonine-protei 72.3 70 0.0024 30.6 15.1 66 28-110 178-244 (437)
243 2hes_X YDR267CP; beta-propelle 72.1 55 0.0019 30.5 13.2 73 22-109 60-136 (330)
244 3i2n_A WD repeat-containing pr 71.6 30 0.001 31.6 10.9 65 88-168 176-243 (357)
245 2pbi_B Guanine nucleotide-bind 71.4 70 0.0024 30.2 20.5 113 23-169 199-316 (354)
246 2xzm_R RACK1; ribosome, transl 71.3 67 0.0023 30.0 17.9 112 22-167 120-243 (343)
247 3q7m_A Lipoprotein YFGL, BAMB; 71.1 53 0.0018 31.1 12.9 30 83-114 270-300 (376)
248 4a5s_A Dipeptidyl peptidase 4 70.7 17 0.00059 38.6 10.2 119 23-168 19-151 (740)
249 2pm7_B Protein transport prote 70.6 64 0.0022 29.5 14.3 72 22-109 11-84 (297)
250 3pe7_A Oligogalacturonate lyas 70.6 64 0.0022 30.1 13.3 67 26-111 41-111 (388)
251 4gga_A P55CDC, cell division c 70.4 79 0.0027 30.4 17.7 29 22-50 149-177 (420)
252 3ott_A Two-component system se 70.4 85 0.0029 33.3 15.6 121 22-167 325-447 (758)
253 3dw8_B Serine/threonine-protei 68.6 82 0.0028 29.9 16.9 86 22-111 287-373 (447)
254 2j04_A TAU60, YPL007P, hypothe 68.3 1.1E+02 0.0039 32.7 15.7 76 22-111 131-211 (588)
255 2oaj_A Protein SNI1; WD40 repe 66.4 79 0.0027 34.9 14.7 69 21-110 18-87 (902)
256 2oit_A Nucleoporin 214KDA; NH2 66.1 21 0.00072 35.7 9.2 118 22-168 94-223 (434)
257 3q7m_A Lipoprotein YFGL, BAMB; 66.0 79 0.0027 29.8 12.9 74 26-113 49-125 (376)
258 2j04_A TAU60, YPL007P, hypothe 65.3 50 0.0017 35.4 12.2 75 21-111 86-160 (588)
259 3odt_A Protein DOA1; ubiquitin 64.2 78 0.0027 28.1 18.1 70 22-108 61-130 (313)
260 3jro_A Fusion protein of prote 61.8 31 0.0011 36.9 10.0 72 22-109 55-130 (753)
261 3gre_A Serine/threonine-protei 60.5 1.2E+02 0.004 28.9 16.9 86 6-109 51-140 (437)
262 2gop_A Trilobed protease; beta 60.2 75 0.0026 29.2 11.3 56 22-97 60-121 (347)
263 3c5m_A Oligogalacturonate lyas 58.6 1.2E+02 0.0039 28.2 14.4 68 23-111 240-329 (396)
264 3jro_A Fusion protein of prote 58.1 1.9E+02 0.0066 30.6 17.4 118 22-169 101-239 (753)
265 1xfd_A DIP, dipeptidyl aminope 57.9 90 0.0031 32.2 12.5 30 22-51 62-100 (723)
266 3o4h_A Acylamino-acid-releasin 57.8 62 0.0021 32.8 11.1 71 23-111 24-101 (582)
267 2gop_A Trilobed protease; beta 57.3 1.2E+02 0.004 27.8 12.2 27 84-111 174-208 (347)
268 2oaj_A Protein SNI1; WD40 repe 57.2 82 0.0028 34.7 12.7 29 22-50 490-518 (902)
269 3frx_A Guanine nucleotide-bind 55.5 1.3E+02 0.0044 27.8 19.3 112 22-170 109-229 (319)
270 3c5m_A Oligogalacturonate lyas 55.2 1.3E+02 0.0043 27.9 12.0 29 23-51 38-69 (396)
271 3bg1_A Protein SEC13 homolog; 54.4 97 0.0033 28.6 11.1 70 22-110 15-89 (316)
272 1k32_A Tricorn protease; prote 54.1 1E+02 0.0035 34.2 12.8 73 21-111 379-461 (1045)
273 3vu4_A KMHSV2; beta-propeller 53.4 1.1E+02 0.0037 28.9 11.4 29 22-50 242-270 (355)
274 1z68_A Fibroblast activation p 51.9 34 0.0012 35.6 8.2 73 23-111 18-99 (719)
275 3jrp_A Fusion protein of prote 51.7 1.4E+02 0.0048 27.1 18.6 119 21-169 102-241 (379)
276 1kv9_A Type II quinohemoprotei 51.1 1.6E+02 0.0055 31.2 13.4 16 30-45 322-337 (668)
277 3sbq_A Nitrous-oxide reductase 48.4 47 0.0016 35.9 8.4 75 21-108 323-405 (638)
278 1k32_A Tricorn protease; prote 46.8 3.3E+02 0.011 30.0 15.9 29 82-110 380-408 (1045)
279 4ggc_A P55CDC, cell division c 46.6 1.6E+02 0.0053 26.2 17.5 28 23-50 70-97 (318)
280 1kb0_A Quinohemoprotein alcoho 44.3 1.9E+02 0.0067 30.6 12.7 25 142-166 330-355 (677)
281 4h3o_A Lectin; cadmium, plant 43.2 1.3E+02 0.0044 24.2 9.4 15 24-38 21-35 (105)
282 2oit_A Nucleoporin 214KDA; NH2 42.6 53 0.0018 32.6 7.5 73 21-111 150-223 (434)
283 4gq1_A NUP37; propeller, trans 41.9 2.4E+02 0.0081 26.9 11.9 127 24-168 140-286 (393)
284 1z68_A Fibroblast activation p 41.8 39 0.0013 35.2 6.6 67 23-111 62-139 (719)
285 1kb0_A Quinohemoprotein alcoho 41.4 3.5E+02 0.012 28.7 14.4 14 84-97 396-410 (677)
286 1flg_A Protein (quinoprotein e 40.9 2.6E+02 0.0088 29.1 12.8 14 85-98 416-430 (582)
287 2bkl_A Prolyl endopeptidase; m 40.1 3E+02 0.01 28.7 13.2 29 23-51 123-156 (695)
288 3dzw_A Agglutinin; lectin, man 40.0 1.4E+02 0.0049 23.9 10.7 18 84-101 52-69 (109)
289 1xip_A Nucleoporin NUP159; bet 38.2 2.6E+02 0.0088 27.9 11.8 69 23-105 90-159 (388)
290 2ad6_A Methanol dehydrogenase 38.1 3.2E+02 0.011 28.2 13.0 112 31-162 62-189 (571)
291 3s9j_A Member of DUF4221 famil 37.8 2.3E+02 0.0077 28.3 11.2 69 30-111 36-110 (369)
292 4h3o_A Lectin; cadmium, plant 37.3 1.6E+02 0.0055 23.6 11.1 24 82-105 51-74 (105)
293 3f3f_A Nucleoporin SEH1; struc 36.7 2.2E+02 0.0076 25.1 14.0 127 21-168 111-249 (351)
294 1kv9_A Type II quinohemoprotei 36.0 3.9E+02 0.013 28.1 13.4 17 89-105 321-337 (668)
295 3mez_B Mannose-specific lectin 34.5 1.8E+02 0.0063 23.5 10.5 18 84-101 59-76 (113)
296 1w6s_A Methanol dehydrogenase 32.6 4.2E+02 0.015 27.8 13.0 21 145-165 329-350 (599)
297 1flg_A Protein (quinoprotein e 32.3 4.5E+02 0.015 27.3 13.8 27 87-114 493-520 (582)
298 2j04_B YDR362CP, TAU91; beta p 32.3 1.3E+02 0.0045 30.9 8.8 67 84-168 359-428 (524)
299 3pe7_A Oligogalacturonate lyas 30.8 3.2E+02 0.011 25.1 17.1 33 25-61 85-118 (388)
300 2pm7_B Protein transport prote 30.6 2.1E+02 0.0072 25.8 9.1 71 23-109 56-130 (297)
301 1yiq_A Quinohemoprotein alcoho 29.8 3.3E+02 0.011 28.9 11.6 29 85-114 480-509 (689)
302 4b8c_D Glucose-repressible alc 28.7 11 0.00039 40.8 -0.2 11 329-340 32-42 (727)
303 2ovr_B FBW7, F-BOX/WD repeat p 26.7 4.2E+02 0.014 25.2 14.4 19 91-109 328-346 (445)
304 3bg1_A Protein SEC13 homolog; 26.0 2.2E+02 0.0075 26.1 8.4 71 23-109 60-134 (316)
305 2j04_B YDR362CP, TAU91; beta p 25.4 1.2E+02 0.0041 31.2 7.0 69 24-111 359-428 (524)
306 4gga_A P55CDC, cell division c 24.5 4.6E+02 0.016 24.9 14.0 69 25-111 110-178 (420)
307 3elq_A Arylsulfate sulfotransf 24.5 6.5E+02 0.022 26.7 15.7 77 21-102 355-454 (571)
308 3r0e_B Lectin; carbohydrate bi 24.4 2.8E+02 0.0094 22.3 9.5 18 84-101 56-73 (110)
309 3a0c_A Mannose/sialic acid-bin 24.3 2.7E+02 0.0094 22.2 7.7 18 84-101 53-70 (110)
310 1w6s_A Methanol dehydrogenase 24.3 6.3E+02 0.022 26.4 13.5 75 31-113 62-143 (599)
311 4a5s_A Dipeptidyl peptidase 4 23.6 2E+02 0.0068 30.3 8.4 27 24-50 65-100 (740)
312 2ovr_B FBW7, F-BOX/WD repeat p 22.7 5E+02 0.017 24.6 14.5 24 27-50 124-147 (445)
313 2w18_A PALB2, fancn, partner a 22.4 5.8E+02 0.02 25.3 14.1 22 144-165 333-354 (356)
314 1xd5_A Gastrodianin-1, antifun 21.4 3.1E+02 0.011 21.8 11.1 15 84-98 52-66 (112)
315 1p22_A F-BOX/WD-repeat protein 20.0 5.6E+02 0.019 24.3 15.7 63 27-109 138-200 (435)
No 1
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=3.6e-21 Score=203.59 Aligned_cols=151 Identities=25% Similarity=0.335 Sum_probs=124.2
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCC--CCccEEEecCCCCcccCCCCCccCccCCCcc-eEEEc-------
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSP--YSRPKLVAGSPEGYYGHVDGRPRGARMNHPK-GLAVD------- 89 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~--~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~-GIavD------- 89 (445)
..|++||++++|+ |||+|+.+|+|++++.++.. ...+.+++|.. |..|+.||.+..++|+.|. +++++
T Consensus 310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~-g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~ 388 (496)
T 3kya_A 310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY-KQSGYRDDVGTEARMNNPCQGVFVKNPDYTGE 388 (496)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT-TBCCCBCCBGGGCBCSSEEEEEEEECTTCCSS
T ss_pred CCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC-CCCcccCCcccccccCCCeEEEEEcccccccc
Confidence 5799999999998 89999999999999877432 11237888864 5677778999999999999 89998
Q ss_pred CCCCEEEEeCCCCEEEEEcCCC-cEEEecCcc------cCCCCCCCC-CccCcccCCCceEEEECC-CCeEEEEECCCCe
Q 013321 90 DRGNIYIADTMNMAIRKISDTG-VTTIAGGKW------SRGVGHVDG-PSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQA 160 (445)
Q Consensus 90 ~dG~LYVAD~~N~rIrkfd~dG-v~tiaGg~~------G~g~G~~dg-p~~~a~f~~P~gI~~vd~-dG~LyVaD~gn~r 160 (445)
.+|+|||||+.|||||+|+++| +++++|... +..+|..+| ++..+.|+.|.+|+ +++ +|.|||+|++|+|
T Consensus 389 ~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIa-vd~~~g~lyVaD~~N~r 467 (496)
T 3kya_A 389 EEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLV-YDDVKEMFYVHDQVGHT 467 (496)
T ss_dssp CCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEE-EETTTTEEEEEETTTTE
T ss_pred CCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEE-EECCCCEEEEEeCCCCE
Confidence 6899999999999999999999 788887532 122355677 78899999999997 566 4999999999999
Q ss_pred EEEEECCCCceee
Q 013321 161 IREIQLHDDDCSD 173 (445)
Q Consensus 161 Ir~i~l~~~~~~~ 173 (445)
||+|++++..|.-
T Consensus 468 Irki~~~~~~~~~ 480 (496)
T 3kya_A 468 IRTISMEQEENVA 480 (496)
T ss_dssp EEEEEECCCC---
T ss_pred EEEEECCCCcccc
Confidence 9999999877763
No 2
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.81 E-value=5.3e-19 Score=182.95 Aligned_cols=146 Identities=27% Similarity=0.398 Sum_probs=120.1
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCC--CCCCccEEEecCCCCcccCCCCCccCccCCCcceEEE---------
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSL--SPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAV--------- 88 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg--~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIav--------- 88 (445)
..+.+|+++++|+ |||+|..+++|++++.++ ...+.+.+++|.. +..|..+|....++|+.|.||++
T Consensus 273 ~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~~g~~dg~~~~a~~~~P~giav~~n~~y~~d 351 (433)
T 4hw6_A 273 GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQH-SSPGWVDGMGTGARLWGPNQGIFVKNEAYAGE 351 (433)
T ss_dssp SSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECT-TCCCCBCEEGGGSBCSSEEEEEEEECGGGTTS
T ss_pred CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecC-CCCccCCCcccceEEcCCccEEEEcccccccc
Confidence 3577899999998 999999999999998763 2234567888863 55667788888899999999999
Q ss_pred cCCCCEEEEeCCCCEEEEEcCCC-cEEEecCcccCCCCCCCC-CccCcccCCCceEEEECCCCeEEEEECCCCeEEEEEC
Q 013321 89 DDRGNIYIADTMNMAIRKISDTG-VTTIAGGKWSRGVGHVDG-PSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL 166 (445)
Q Consensus 89 D~dG~LYVAD~~N~rIrkfd~dG-v~tiaGg~~G~g~G~~dg-p~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l 166 (445)
|++|+|||||+.|+||++|+++| +.+++|.......|+.++ .+..+.|..|.+|++..++|.|||+|.+|+||++|++
T Consensus 352 d~~g~lyvaD~~n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 352 EDEYDFYFCDRDSHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp SCCEEEEEEETTTTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCCcEEEEECCCCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 89999999999999999999999 677776532112345566 7778899999999753389999999999999999987
Q ss_pred C
Q 013321 167 H 167 (445)
Q Consensus 167 ~ 167 (445)
+
T Consensus 432 e 432 (433)
T 4hw6_A 432 E 432 (433)
T ss_dssp C
T ss_pred C
Confidence 5
No 3
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.78 E-value=5.8e-18 Score=173.14 Aligned_cols=139 Identities=25% Similarity=0.400 Sum_probs=117.7
Q ss_pred CCce-EEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEe
Q 013321 21 MEPF-SVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 98 (445)
Q Consensus 21 ~~P~-gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 98 (445)
..|. +|++++ +|.|||+|..+++|++++.+ |.+.+++|.. +..|..+|....++|+.|.||++|++|+|||||
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~----g~~~~~~g~~-~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad 340 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD----GECEWFCGSA-TQKTVQDGLREEALFAQPNGMTVDEDGNFYIVD 340 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTTTEEEEECTT----CCEEEEEECT-TCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEE
T ss_pred CCccccEEEeCCCCEEEEEeCCCCEEEEEecC----CCEEEEEeCC-CCCCcCCCcccccEeCCCeEEEEeCCCCEEEEe
Confidence 4577 999999 68999999999999999988 5677888864 345666777778899999999999999999999
Q ss_pred C-CCCEEEEEc-CCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC
Q 013321 99 T-MNMAIRKIS-DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 99 ~-~N~rIrkfd-~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~ 167 (445)
+ .|+||++++ .+| +.++++.... .|..++....+.|..|.+|+ ++++|.|||+|.+|++|++|+++
T Consensus 341 ~~~~~~I~~~~~~~G~v~~~~g~~~~--~g~~~g~~~~~~~~~P~gia-vd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 341 GFKGYCLRKLDILDGYVSTVAGQVDV--ASQIDGTPLEATFNYPYDIC-YDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTTTCEEEEEETTTTEEEEEEECTTC--BSCCCBSTTTCCBSSEEEEE-ECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCCCEEEEEECCCCEEEEEeCCCCC--CCcCCCChhceEeCCceEEE-EcCCCCEEEEECCCCeEEEEEeC
Confidence 9 999999999 788 6677664221 35567777888999999997 68889999999999999999863
No 4
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=2.9e-18 Score=176.98 Aligned_cols=144 Identities=29% Similarity=0.439 Sum_probs=117.4
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCC--CCCccEEEecCCCCcccCCCCCccCccCCCcc-eEEEc-------
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLS--PYSRPKLVAGSPEGYYGHVDGRPRGARMNHPK-GLAVD------- 89 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~--~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~-GIavD------- 89 (445)
..|.+|+++++|+ |||+|..+++|++++.++. ....+.+++|.. +..|..+|....++|+.|. |++++
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~ 348 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQ-GAKDWVDGVGKKARMHAPRQGTFVKNPAYKGS 348 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECT-TCBCCBCEEGGGCBBSSEEEEEEEECGGGTTS
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccC-CCCCCCCCCCcceEeCCCcceEEEcccccccc
Confidence 5799999999998 9999999999999988742 123367788764 5566667877888999999 89994
Q ss_pred -CCCCEEEEeCCCCEEEEEcCCC-cEEEecCc-ccCCCCCCCC-CccCcccCCCceEEEECC-CCeEEEEECCCCeEEEE
Q 013321 90 -DRGNIYIADTMNMAIRKISDTG-VTTIAGGK-WSRGVGHVDG-PSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQAIREI 164 (445)
Q Consensus 90 -~dG~LYVAD~~N~rIrkfd~dG-v~tiaGg~-~G~g~G~~dg-p~~~a~f~~P~gI~~vd~-dG~LyVaD~gn~rIr~i 164 (445)
++|+|||||+.|+||++|+.+| +.+++|.. .+. .|+.++ ++..+.|..|.+|+ +++ ++.|||+|.+|+||++|
T Consensus 349 D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~-~G~~dG~~~~~~~~~~P~gia-vd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 349 SDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGT-SGYNDGDLRQEARFNHPEGIV-YDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp SCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSS-SSCBCEETTTTCBCSSEEEEE-EETTTTEEEEEEGGGTEEEEE
T ss_pred CCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCC-CcccCCCchhhcEeCCCcEEE-EECCCCEEEEEECCCCeEEEE
Confidence 6699999999999999999999 66776642 122 244455 67888999999997 565 79999999999999999
Q ss_pred ECC
Q 013321 165 QLH 167 (445)
Q Consensus 165 ~l~ 167 (445)
+++
T Consensus 427 ~~e 429 (430)
T 3tc9_A 427 GYE 429 (430)
T ss_dssp EEC
T ss_pred ccC
Confidence 875
No 5
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.61 E-value=5.1e-14 Score=137.62 Aligned_cols=139 Identities=19% Similarity=0.269 Sum_probs=102.8
Q ss_pred CCCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEE
Q 013321 19 FGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIA 97 (445)
Q Consensus 19 ~g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVA 97 (445)
....|.+|+++++|+|||+|..+++|++++.++.. ..+..+... +..|.. ...|+.|.+|++++ +|+||||
T Consensus 89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~--~~~g~~-----~~~~~~P~~ia~~~~~g~lyv~ 160 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRS--MQPGSD-----QNHFCQPTDVAVEPSTGAVFVS 160 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBT--TBCCCS-----TTCCSSEEEEEECTTTCCEEEE
T ss_pred ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEeccc--CCCCCC-----ccccCCCcEEEEeCCCCeEEEE
Confidence 34689999999999999999999999999998531 123333221 222221 23688999999999 8999999
Q ss_pred eC-CCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCC-CeEEEEECCCCeEEEEECC-CCce
Q 013321 98 DT-MNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS-CSLLVIDRGNQAIREIQLH-DDDC 171 (445)
Q Consensus 98 D~-~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~d-G~LyVaD~gn~rIr~i~l~-~~~~ 171 (445)
|. .+++|++++.+|..+...+..+.+ .......|..|.+|+ ++++ +.|||+|.++++|++++++ +...
T Consensus 161 d~~~~~~I~~~~~~g~~~~~~~~~g~~-----~~~~~~~~~~p~gia-~d~~~g~l~v~d~~~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 161 DGYCNSRIVQFSPSGKFVTQWGEESSG-----SSPRPGQFSVPHSLA-LVPHLDQLCVADRENGRIQCFKTDTKEFV 231 (329)
T ss_dssp ECSSCCEEEEECTTSCEEEEECEECCS-----SSCCTTEESCEEEEE-EETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred eCCCCCeEEEEcCCCCEEEEeccCCCC-----CCCCCcccCCCcEEE-EECCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 97 799999999998443333222211 122345788999997 4665 9999999999999999998 4433
No 6
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=1.2e-14 Score=149.99 Aligned_cols=131 Identities=16% Similarity=0.188 Sum_probs=101.9
Q ss_pred CCCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEE
Q 013321 20 GMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 97 (445)
Q Consensus 20 g~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 97 (445)
+..|++|++++ +|.|||+|..+++|+++++++ +....+.... ....|.+|+++++|+ |||+
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~---~~~~~~~~~~--------------~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTT---QETTPLFTIQ--------------DSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEEETTT---TEEEEEEECS--------------SSSCCEEEEECTTSSEEEEE
T ss_pred CCCceEEEEeCCCCEEEEEECCCCEEEEEECCC---CcEEEEEEcC--------------CCCcceeEEEcCCCCEEEEE
Confidence 46799999999 899999999999999999984 3332332221 134799999999999 9999
Q ss_pred eCCCCEEEEEcCCC-------cEEEecCcccCCCCCCCCCccCcccCCCc-eEEEE--------CCCCeEEEEECCCCeE
Q 013321 98 DTMNMAIRKISDTG-------VTTIAGGKWSRGVGHVDGPSEDAKFSNDF-DVVYV--------GSSCSLLVIDRGNQAI 161 (445)
Q Consensus 98 D~~N~rIrkfd~dG-------v~tiaGg~~G~g~G~~dgp~~~a~f~~P~-gI~~v--------d~dG~LyVaD~gn~rI 161 (445)
|..+++|++++.++ +.++++.. +. .|..++....+.|..|. +++ + |.+|.|||+|.+|++|
T Consensus 288 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~-~g~~dg~~~~a~~~~P~~gv~-v~~~~y~~~D~~g~lyvaD~~n~~I 364 (430)
T 3tc9_A 288 VVNQHYILRSDYDWKTKRLTTPYIVCGQQ-GA-KDWVDGVGKKARMHAPRQGTF-VKNPAYKGSSDEYDFYFCDRENHCI 364 (430)
T ss_dssp ETTTTEEEEEEEETTTTEECCCEEEEECT-TC-BCCBCEEGGGCBBSSEEEEEE-EECGGGTTSSCCEEEEEEEGGGTEE
T ss_pred ECCCCEEEEEeCCcccccccceEEEeccC-CC-CCCCCCCCcceEeCCCcceEE-EccccccccCCCCeEEEEECCCcEE
Confidence 99999999998664 34565531 11 34456677788999999 554 5 4679999999999999
Q ss_pred EEEECCCCc
Q 013321 162 REIQLHDDD 170 (445)
Q Consensus 162 r~i~l~~~~ 170 (445)
++|+.++..
T Consensus 365 ~~i~~~G~v 373 (430)
T 3tc9_A 365 RILTPQGRV 373 (430)
T ss_dssp EEECTTSEE
T ss_pred EEECCCCcE
Confidence 999977643
No 7
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.60 E-value=1.7e-14 Score=149.18 Aligned_cols=132 Identities=16% Similarity=0.197 Sum_probs=103.1
Q ss_pred CCCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEE
Q 013321 20 GMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYI 96 (445)
Q Consensus 20 g~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYV 96 (445)
+..|.+|++++ +|+|||+|..+++|+++++++ |.+ ..+.... ....+.+|+++++|+ |||
T Consensus 227 ~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~---g~~~~~~~~~~--------------~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 227 ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT---GTLTEEEVMMD--------------TKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp CSSBCCCEECTTTCCEEECBTTCSEEEEECTTT---CCEEEEEEECS--------------CCSSCEEEEECTTSSEEEE
T ss_pred cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC---CeEEEEEeccC--------------CCCCcccEEEeCCCCEEEE
Confidence 46799999999 899999999999999999873 444 3333221 012456899999998 999
Q ss_pred EeCCCCEEEEEcCC---C----cEEEecCcccCCCCCCCCCccCcccCCCceEEEE--------CCCCeEEEEECCCCeE
Q 013321 97 ADTMNMAIRKISDT---G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV--------GSSCSLLVIDRGNQAI 161 (445)
Q Consensus 97 AD~~N~rIrkfd~d---G----v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~v--------d~dG~LyVaD~gn~rI 161 (445)
+|..+++|++++.+ + ..+++|.. +. .|..+++...+.|..|.+|+++ +.+|.|||+|.+|++|
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~-~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I 367 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQH-SS-PGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTV 367 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEECT-TC-CCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEecC-CC-CccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEE
Confidence 99999999998854 2 24666531 21 3555777888999999999743 8899999999999999
Q ss_pred EEEECCCCc
Q 013321 162 REIQLHDDD 170 (445)
Q Consensus 162 r~i~l~~~~ 170 (445)
++|++++..
T Consensus 368 ~~~~~~G~v 376 (433)
T 4hw6_A 368 RVLTPEGRV 376 (433)
T ss_dssp EEECTTSEE
T ss_pred EEECCCCCE
Confidence 999987743
No 8
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=8.7e-15 Score=154.87 Aligned_cols=134 Identities=16% Similarity=0.204 Sum_probs=101.8
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCC-------CCCCCc---------cEEEecCCCCcccCCCCCccCccCCCc
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTS-------LSPYSR---------PKLVAGSPEGYYGHVDGRPRGARMNHP 83 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~d-------g~~~G~---------v~~vaG~~~G~~G~~dG~~~~a~Ln~P 83 (445)
.+|++|++++ +|.|||+|..+++|++++++ +..... ...++-. ..-..|
T Consensus 247 ~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~--------------~~~~~p 312 (496)
T 3kya_A 247 KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI--------------ADPSWE 312 (496)
T ss_dssp SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC--------------SSSSCC
T ss_pred CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec--------------CCCCCc
Confidence 5799999999 78999999999999999986 211100 0111111 012468
Q ss_pred ceEEEcCCCC-EEEEeCCCCEEEEEcCCCc-------EEEecCcccCCCCCCCCCccCcccCCCceEEEEC-------CC
Q 013321 84 KGLAVDDRGN-IYIADTMNMAIRKISDTGV-------TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVG-------SS 148 (445)
Q Consensus 84 ~GIavD~dG~-LYVAD~~N~rIrkfd~dGv-------~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd-------~d 148 (445)
.+||++++|+ |||||+.+|||++++.++. .+++|.. |. .|+.||++..++|+.|.++++++ .+
T Consensus 313 ~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~-g~-~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~ 390 (496)
T 3kya_A 313 FQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY-KQ-SGYRDDVGTEARMNNPCQGVFVKNPDYTGEEE 390 (496)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT-TB-CCCBCCBGGGCBCSSEEEEEEEECTTCCSSCC
T ss_pred eEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC-CC-CcccCCcccccccCCCeEEEEEccccccccCC
Confidence 9999999999 8999999999999886652 4666632 22 35568899999999999544566 68
Q ss_pred CeEEEEECCCCeEEEEECCCCc
Q 013321 149 CSLLVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 149 G~LyVaD~gn~rIr~i~l~~~~ 170 (445)
|.|||+|.+|+|||+|++++..
T Consensus 391 g~lyVaD~~N~rIr~i~~~G~v 412 (496)
T 3kya_A 391 YDFYFVDRLNFCVRKVTPEGIV 412 (496)
T ss_dssp EEEEEEEGGGTEEEEECTTCBE
T ss_pred CeEEEEECCCCEEEEEeCCCCE
Confidence 8999999999999999987743
No 9
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=1.1e-13 Score=141.46 Aligned_cols=133 Identities=21% Similarity=0.256 Sum_probs=102.9
Q ss_pred CCCCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcc-eEEEcC-CCCEE
Q 013321 19 FGMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPK-GLAVDD-RGNIY 95 (445)
Q Consensus 19 ~g~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~-GIavD~-dG~LY 95 (445)
.+..|.+|++++ +|.|||+|. +++|++++.++ +...++++.. ..+. .-..|. +|++++ +|.||
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~---~~~~~~~~~~--~~g~--------~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKT---QEVTLIKQLE--LSGS--------LGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECT-TCEEEEEETTT---CCEEEEEECC--CCSC--------CCCSSCCEEEEETTTTEEE
T ss_pred hcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCC---CCEEEEeccc--ccCC--------CCCCccccEEEeCCCCEEE
Confidence 346899999999 899999886 78999999874 4455554432 1111 112477 999999 68899
Q ss_pred EEeCCCCEEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEEC-CCCeEEEEECCC
Q 013321 96 IADTMNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-GNQAIREIQLHD 168 (445)
Q Consensus 96 VAD~~N~rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~-gn~rIr~i~l~~ 168 (445)
|+|..+++|++++.+| +.++++.... .|..+++...+.|..|.+|+ ++++|.|||+|. ++++|++|++..
T Consensus 283 v~d~~~~~I~~~~~~g~~~~~~g~~~~--~g~~dg~~~~~~~~~P~gia-~d~dG~lyvad~~~~~~I~~~~~~~ 354 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGECEWFCGSATQ--KTVQDGLREEALFAQPNGMT-VDEDGNFYIVDGFKGYCLRKLDILD 354 (409)
T ss_dssp EEETTTTEEEEECTTCCEEEEEECTTC--CSCBCEEGGGCBCSSEEEEE-ECTTCCEEEEETTTTCEEEEEETTT
T ss_pred EEeCCCCEEEEEecCCCEEEEEeCCCC--CCcCCCcccccEeCCCeEEE-EeCCCCEEEEeCCCCCEEEEEECCC
Confidence 9999999999999888 5566553211 35566777788999999997 689999999999 999999999543
No 10
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.53 E-value=4e-13 Score=131.27 Aligned_cols=145 Identities=17% Similarity=0.229 Sum_probs=105.8
Q ss_pred CCCceEEEEcCCCcEEEEeCCCC------------------------eEEEEeCCCCCCCccEEEecCCCCcccCCCCCc
Q 013321 20 GMEPFSVAVSPSGELLVLDSENS------------------------NIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRP 75 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs~n~------------------------rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~ 75 (445)
...|.+||++++|+|||++..++ +|++++.+. |++....+.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~------------ 87 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN---AEILQSSGK------------ 87 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT---CCEEEEECT------------
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC---CeEEeccCC------------
Confidence 46899999999999999999884 578887752 444443332
Q ss_pred cCccCCCcceEEEcCCCCEEEEeCCCCEEEEEcCCCc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECC-CCeEE
Q 013321 76 RGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLL 152 (445)
Q Consensus 76 ~~a~Ln~P~GIavD~dG~LYVAD~~N~rIrkfd~dGv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~-dG~Ly 152 (445)
..|+.|.+|++|++|+|||+|..+++|++++.+|. .+...+..+. .| .....|..|.+|+ +++ +|.||
T Consensus 88 --~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~-~g-----~~~~~~~~P~~ia-~~~~~g~ly 158 (329)
T 3fvz_A 88 --NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ-PG-----SDQNHFCQPTDVA-VEPSTGAVF 158 (329)
T ss_dssp --TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB-CC-----CSTTCCSSEEEEE-ECTTTCCEE
T ss_pred --CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC-CC-----CCccccCCCcEEE-EeCCCCeEE
Confidence 24789999999999999999999999999998873 2222222111 11 1234688999997 576 89999
Q ss_pred EEEC-CCCeEEEEECCCCceeecCC-----------CCccceEEEEec
Q 013321 153 VIDR-GNQAIREIQLHDDDCSDNYD-----------DTFHLGIFVLVA 188 (445)
Q Consensus 153 VaD~-gn~rIr~i~l~~~~~~~~~~-----------~g~P~gIav~~~ 188 (445)
|+|. ++++|++++.++........ ...|.+|++...
T Consensus 159 v~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~ 206 (329)
T 3fvz_A 159 VSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH 206 (329)
T ss_dssp EEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETT
T ss_pred EEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECC
Confidence 9997 89999999987765444321 124778888753
No 11
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.49 E-value=1.2e-12 Score=131.03 Aligned_cols=140 Identities=19% Similarity=0.180 Sum_probs=106.6
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.|||+|+ +|+||++|..+++|.+++.+|.. ..++.. ..|..|.+|++|+ +|.||++|
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~~~l~~---------------~~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---RKVLLW---------------QSLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEC---------------TTCSCEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc---eEEEEe---------------CCCCCcceEEEecCcCeEEEec
Confidence 5799999997 78899999999999999998532 222221 1377899999997 77899999
Q ss_pred CCC-CEEEEEcCCCc-EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--c
Q 013321 99 TMN-MAIRKISDTGV-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--N 174 (445)
Q Consensus 99 ~~N-~rIrkfd~dGv-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~--~ 174 (445)
+.+ ++|.+++.+|. .+... ...+..|++|++...++.||++|.++++|+++++++..... .
T Consensus 178 ~~~~~~I~r~~~dG~~~~~~~---------------~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~ 242 (349)
T 3v64_C 178 WGNTPRIEASSMDGSGRRIIA---------------DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS 242 (349)
T ss_dssp CSSSCEEEEEETTSCSCEESC---------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred cCCCCEEEEEeCCCCCcEEEE---------------ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe
Confidence 998 99999999882 22211 11367899998644788999999999999999998855332 2
Q ss_pred CCCCccceEEEEeccceEE
Q 013321 175 YDDTFHLGIFVLVAAAFFG 193 (445)
Q Consensus 175 ~~~g~P~gIav~~~a~~vg 193 (445)
...+.|.||++..+..++.
T Consensus 243 ~~~~~P~giav~~~~ly~t 261 (349)
T 3v64_C 243 QGLPHPFAITVFEDSLYWT 261 (349)
T ss_dssp SSCSSEEEEEEETTEEEEE
T ss_pred CCCCCceEEEEECCEEEEe
Confidence 3456899999965444433
No 12
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.47 E-value=2.1e-12 Score=130.95 Aligned_cols=139 Identities=19% Similarity=0.173 Sum_probs=106.4
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.|||||+ +|+||++|..+++|.+++++|.. ..+++. ..|..|.||++|+ +|.||++|
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~---~~~l~~---------------~~l~~P~giavdp~~g~ly~td 220 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---RKVLLW---------------QSLEKPRAIALHPMEGTIYWTD 220 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS---CEEEEC---------------SSCSCEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc---eEEeec---------------CCCCCCcEEEEEcCCCeEEEec
Confidence 4799999997 78899999999999999998532 233321 1377999999996 67799999
Q ss_pred CCC-CEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--
Q 013321 99 TMN-MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-- 173 (445)
Q Consensus 99 ~~N-~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~-- 173 (445)
+.+ ++|.+++.+| ..++.. ..+..|++|++...++.|||+|..+++|+++++++.....
T Consensus 221 ~~~~~~I~r~~~dG~~~~~~~~----------------~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 284 (386)
T 3v65_B 221 WGNTPRIEASSMDGSGRRIIAD----------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI 284 (386)
T ss_dssp CSSSCEEEEEETTSCSCEEEEC----------------SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEE
T ss_pred cCCCCEEEEEeCCCCCcEEEEE----------------CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEE
Confidence 998 9999999988 333321 1266899998654788999999999999999998755332
Q ss_pred cCCCCccceEEEEeccceEE
Q 013321 174 NYDDTFHLGIFVLVAAAFFG 193 (445)
Q Consensus 174 ~~~~g~P~gIav~~~a~~vg 193 (445)
....+.|.||++..+..++.
T Consensus 285 ~~~~~~P~giav~~~~ly~t 304 (386)
T 3v65_B 285 SQGLPHPFAITVFEDSLYWT 304 (386)
T ss_dssp CSSCSSEEEEEEETTEEEEE
T ss_pred ECCCCCceEEEEECCEEEEe
Confidence 23456899999965544433
No 13
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.46 E-value=1.8e-12 Score=132.31 Aligned_cols=138 Identities=17% Similarity=0.155 Sum_probs=105.2
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.|||||. .++||++|..+++|.+++++|. ...+++.. .|..|.+|++|+ .|.||++|
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~---~~~~l~~~---------------~~~~P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------NGSKPRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTC---SEEEEEEC---------------SSCCEEEEEEETTTTEEEEEE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCC---ceEEEEeC---------------CCCCcceEEEecccCeEEEEe
Confidence 5799999998 7899999999999999999852 23333221 377899999998 67899999
Q ss_pred CC-CCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeec-
Q 013321 99 TM-NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN- 174 (445)
Q Consensus 99 ~~-N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~- 174 (445)
++ +++|.+++.+| ..++.. ..+.+|++|++...++.||++|+.+++|+++++++......
T Consensus 221 ~~~~~~I~~~~~dG~~~~~~~~----------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 284 (400)
T 3p5b_L 221 WGTPAKIKKGGLNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 284 (400)
T ss_dssp CSSSCCEEEEETTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEE
T ss_pred CCCCCEEEEEeCCCCccEEEEE----------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEE
Confidence 87 58999999988 333311 13678999986557889999999999999999988654332
Q ss_pred ---CCCCccceEEEEeccceE
Q 013321 175 ---YDDTFHLGIFVLVAAAFF 192 (445)
Q Consensus 175 ---~~~g~P~gIav~~~a~~v 192 (445)
.....|.++++..+..++
T Consensus 285 ~~~~~l~~P~gl~v~~~~lyw 305 (400)
T 3p5b_L 285 EDEKRLAHPFSLAVFEDKVFW 305 (400)
T ss_dssp ECSSTTSSEEEEEEETTEEEE
T ss_pred eCCCCCCCCEEEEEeCCEEEE
Confidence 224568888886543333
No 14
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.46 E-value=2.5e-12 Score=126.46 Aligned_cols=139 Identities=17% Similarity=0.134 Sum_probs=104.4
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.|||+|+ +|+||++|..+++|.+++++|. ...+++.. .+..|.+|++|+ +|.|||+|
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~---------------~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------NGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEEEEC---------------TTCCEEEEEEETTTTEEEEEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC---ceEEEEEC---------------CCCCcceEEeCCCCCEEEEEc
Confidence 5799999996 7889999999999999999842 22333211 367899999997 78899999
Q ss_pred CCC-CEEEEEcCCCc-EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeec--
Q 013321 99 TMN-MAIRKISDTGV-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN-- 174 (445)
Q Consensus 99 ~~N-~rIrkfd~dGv-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~-- 174 (445)
.++ ++|.+++.+|. ..... ...+..|++|++...++.||++|..+++|.++++++......
T Consensus 139 ~~~~~~I~~~~~dG~~~~~~~---------------~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~ 203 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGVDIYSLV---------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 203 (316)
T ss_dssp CSSSCEEEEEETTSCCEEEEE---------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCCeEEEE---------------ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEee
Confidence 986 89999999883 22211 113678999986546789999999999999999987544332
Q ss_pred --CCCCccceEEEEeccceE
Q 013321 175 --YDDTFHLGIFVLVAAAFF 192 (445)
Q Consensus 175 --~~~g~P~gIav~~~a~~v 192 (445)
.....|.||++..+..++
T Consensus 204 ~~~~~~~P~giav~~~~ly~ 223 (316)
T 1ijq_A 204 DEKRLAHPFSLAVFEDKVFW 223 (316)
T ss_dssp CTTTTSSEEEEEEETTEEEE
T ss_pred cCCccCCcEEEEEECCEEEE
Confidence 224578999987543333
No 15
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.45 E-value=2.6e-12 Score=127.48 Aligned_cols=134 Identities=16% Similarity=0.119 Sum_probs=104.1
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.|||+|+ +|+||++|..+++|.+++++|. ...++.. ..+..|.||++|+ .|.||++|
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---~~~~l~~---------------~~~~~P~giavdp~~g~ly~td 140 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS---LRKVLFW---------------QELDQPRAIALDPSSGFMYWTD 140 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEEC---------------SSCSSEEEEEEEGGGTEEEEEE
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCC---cEEEEEe---------------CCCCCccEEEEeCCCCEEEEEe
Confidence 5799999997 7899999999999999999852 1233321 1377899999997 68899999
Q ss_pred CC-CCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--
Q 013321 99 TM-NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-- 173 (445)
Q Consensus 99 ~~-N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~-- 173 (445)
.+ +++|.+++.+| ..++.. ..+..|++|++...++.||++|+.+++|+++++++.....
T Consensus 141 ~~~~~~I~r~~~dG~~~~~~~~----------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 204 (318)
T 3sov_A 141 WGEVPKIERAGMDGSSRFIIIN----------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV 204 (318)
T ss_dssp CSSSCEEEEEETTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred cCCCCEEEEEEcCCCCeEEEEE----------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe
Confidence 86 79999999988 333321 1367899998544688999999999999999998755433
Q ss_pred cCCCCccceEEEEec
Q 013321 174 NYDDTFHLGIFVLVA 188 (445)
Q Consensus 174 ~~~~g~P~gIav~~~ 188 (445)
....+.|.|+++..+
T Consensus 205 ~~~~~~P~glav~~~ 219 (318)
T 3sov_A 205 KGSLPHPFALTLFED 219 (318)
T ss_dssp CSCCSCEEEEEEETT
T ss_pred cCCCCCceEEEEeCC
Confidence 224568999998754
No 16
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.42 E-value=1.2e-11 Score=123.57 Aligned_cols=144 Identities=13% Similarity=0.093 Sum_probs=108.8
Q ss_pred CcEEEEEecCCCCCCCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcce
Q 013321 7 GYTVETVFEGSKFGMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 85 (445)
Q Consensus 7 G~~v~tv~~Gs~~g~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~G 85 (445)
|..++.+.. ....|.+|++++ ++.||++|..+++|+++++++. ....+... .+..|.|
T Consensus 62 g~~~~~~~~---~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~---------------~~~~p~g 120 (349)
T 3v64_C 62 RSEYTLLLN---NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVST---------------GLESPGG 120 (349)
T ss_dssp SCCEEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECS---------------SCSCCCE
T ss_pred CCeeEEeec---CCCceEEEEEeccccEEEEEeccCCceEEEecCCC---CceEEEeC---------------CCCCccE
Confidence 444444443 235699999996 7889999999999999999853 23333322 2668999
Q ss_pred EEEcC-CCCEEEEeCCCCEEEEEcCCCc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCC-CeE
Q 013321 86 LAVDD-RGNIYIADTMNMAIRKISDTGV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAI 161 (445)
Q Consensus 86 IavD~-dG~LYVAD~~N~rIrkfd~dGv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn-~rI 161 (445)
||+|. .|+||++|..+++|.+++.+|. .++. ...+..|.+|++...++.||++|.++ ++|
T Consensus 121 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~----------------~~~l~~P~~iavdp~~g~ly~td~~~~~~I 184 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL----------------WQSLEKPRAIALHPMEGTIYWTDWGNTPRI 184 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE----------------CTTCSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred EEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE----------------eCCCCCcceEEEecCcCeEEEeccCCCCEE
Confidence 99996 7889999999999999998882 3321 12356799998544688999999998 999
Q ss_pred EEEECCCCceeec--CCCCccceEEEEe
Q 013321 162 REIQLHDDDCSDN--YDDTFHLGIFVLV 187 (445)
Q Consensus 162 r~i~l~~~~~~~~--~~~g~P~gIav~~ 187 (445)
.++++++...... .....|.||++..
T Consensus 185 ~r~~~dG~~~~~~~~~~~~~PnGla~d~ 212 (349)
T 3v64_C 185 EASSMDGSGRRIIADTHLFWPNGLTIDY 212 (349)
T ss_dssp EEEETTSCSCEESCCSSCSCEEEEEEET
T ss_pred EEEeCCCCCcEEEEECCCCCcceEEEeC
Confidence 9999998665443 3455799999984
No 17
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.42 E-value=1.1e-11 Score=116.93 Aligned_cols=137 Identities=15% Similarity=0.241 Sum_probs=101.3
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
..|.+|+++++|+|||+|..+++|++++.+ |+.....+.. ..+..|.+|++|++|+|||+|..
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~-------------~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQN----GNVLHKFGCS-------------KHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT----SCEEEEEECT-------------TTCSSEEEEEECSSSEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcCC----CCEEEEeCCC-------------CccCCcEEEEECCCCCEEEEECC
Confidence 579999999999999999999999999987 4443333321 13678999999999999999999
Q ss_pred CCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCC-eEEEEECCCCceeecC---C
Q 013321 101 NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ-AIREIQLHDDDCSDNY---D 176 (445)
Q Consensus 101 N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~-rIr~i~l~~~~~~~~~---~ 176 (445)
+++|++++.+|........ ...+..|.+|+ ++++|.|||++.+++ +|.+++.++....... .
T Consensus 184 ~~~i~~~~~~g~~~~~~~~-------------~g~~~~p~~i~-~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~ 249 (286)
T 1q7f_A 184 AHCVKVFNYEGQYLRQIGG-------------EGITNYPIGVG-INSNGEILIADNHNNFNLTIFTQDGQLISALESKVK 249 (286)
T ss_dssp GTEEEEEETTCCEEEEESC-------------TTTSCSEEEEE-ECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSC
T ss_pred CCEEEEEcCCCCEEEEEcc-------------CCccCCCcEEE-ECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCC
Confidence 9999999988843221111 11246788886 688999999999886 9999998765433321 1
Q ss_pred CCccceEEEEec
Q 013321 177 DTFHLGIFVLVA 188 (445)
Q Consensus 177 ~g~P~gIav~~~ 188 (445)
...|.++++...
T Consensus 250 ~~~~~~i~~~~~ 261 (286)
T 1q7f_A 250 HAQCFDVALMDD 261 (286)
T ss_dssp CSCEEEEEEETT
T ss_pred CCcceeEEECCC
Confidence 223556666543
No 18
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.41 E-value=4.4e-12 Score=140.99 Aligned_cols=138 Identities=17% Similarity=0.164 Sum_probs=104.0
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.|||||. .++|||+|..+++|.+++++|. ...+++.. .|..|.|||||+ .|.|||+|
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~---~~~~l~~~---------------~l~~P~gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------NGSKPRAIVVDPVHGFMYWTD 532 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEEEEC---------------TTCCEEEEEEETTTTEEEEEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCC---eEEEEEeC---------------CCCCcceEEEecCCCCEEEec
Confidence 5799999998 4589999999999999999852 23333321 377899999998 58899999
Q ss_pred CCC-CEEEEEcCCCc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeecC
Q 013321 99 TMN-MAIRKISDTGV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY 175 (445)
Q Consensus 99 ~~N-~rIrkfd~dGv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~~ 175 (445)
+++ ++|.+++.+|. .++.. ..|.+|.+|++...++.|||+|.++++|+++++++.......
T Consensus 533 ~g~~~~I~~~~~dG~~~~~lv~----------------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 533 WGTPAKIKKGGLNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp CSSSCEEEEEETTSCCEEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCCCCeEEEEecCCCceEEEEe----------------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 986 89999999983 33311 236789999865578999999999999999999986544321
Q ss_pred ----CCCccceEEEEeccceE
Q 013321 176 ----DDTFHLGIFVLVAAAFF 192 (445)
Q Consensus 176 ----~~g~P~gIav~~~a~~v 192 (445)
....|.+|++..+.+|+
T Consensus 597 ~~~~~l~~P~glav~~~~lYw 617 (791)
T 3m0c_C 597 EDEKRLAHPFSLAVFEDKVFW 617 (791)
T ss_dssp ECTTTTSSEEEEEEETTEEEE
T ss_pred cCCCccCCCCEEEEeCCEEEE
Confidence 23356667665543333
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.40 E-value=1.1e-11 Score=117.09 Aligned_cols=134 Identities=16% Similarity=0.185 Sum_probs=99.9
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.+|++++ +|.|||+|..+++|.+++.++.. ...+... .+..|.+|++|+ +|.|||+|
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~---~~~~~~~---------------~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ---RRVLFDT---------------GLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECS---------------SCSSEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC---EEEEEEC---------------CCCCccEEEEeeCCCEEEEEE
Confidence 5899999998 57899999999999999998532 2223211 256899999999 68899999
Q ss_pred CC--CCEEEEEcCCCc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCcee-e
Q 013321 99 TM--NMAIRKISDTGV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS-D 173 (445)
Q Consensus 99 ~~--N~rIrkfd~dGv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~-~ 173 (445)
.. +++|.+++.+|. .++.. ..+..|.+|++....+.|||+|.++++|.++++++.... .
T Consensus 141 ~~~~~~~I~~~~~dg~~~~~~~~----------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 141 WNRDNPKIETSHMDGTNRRILAQ----------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp CCSSSCEEEEEETTSCCCEEEEC----------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred CCCCCcEEEEEecCCCCcEEEEE----------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 87 689999998872 22210 135679999754446799999999999999999864322 2
Q ss_pred cCCCCccceEEEEec
Q 013321 174 NYDDTFHLGIFVLVA 188 (445)
Q Consensus 174 ~~~~g~P~gIav~~~ 188 (445)
......|.+|++..+
T Consensus 205 ~~~~~~P~gi~~d~~ 219 (267)
T 1npe_A 205 LEGLQYPFAVTSYGK 219 (267)
T ss_dssp EECCCSEEEEEEETT
T ss_pred ecCCCCceEEEEeCC
Confidence 234567888887643
No 20
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.40 E-value=1e-11 Score=134.29 Aligned_cols=138 Identities=13% Similarity=0.137 Sum_probs=107.1
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.|||||. .++||++|..+++|.+++++|.. ..++... .|+.|.+|++|+ +|.||++|
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~---~~~l~~~---------------~l~~P~~iavdp~~G~ly~tD 453 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM---RKILISE---------------DLEEPRAIVLDPMVGYMYWTD 453 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECT---------------TCCSEEEEEEETTTTEEEEEE
T ss_pred CCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe---EEEEEEC---------------CCCCeeeEEEEcCCCcEEEec
Confidence 5799999996 78899999999999999998532 2333321 388999999998 59999999
Q ss_pred CCC-CEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--
Q 013321 99 TMN-MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-- 173 (445)
Q Consensus 99 ~~N-~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~-- 173 (445)
+++ .+|.+++.+| ..++.. ..|.+|++|++...++.||++|.++++|.++++++.....
T Consensus 454 ~g~~~~I~r~~~dG~~~~~l~~----------------~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~ 517 (619)
T 3s94_A 454 WGEIPKIERAALDGSDRVVLVN----------------TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLV 517 (619)
T ss_dssp CSSSCEEEEEETTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE
T ss_pred CCCCCEEEEEccCCCccEEEEe----------------CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEe
Confidence 885 8999999888 333321 1467999998655688999999999999999998865433
Q ss_pred cCCCCccceEEEEeccceE
Q 013321 174 NYDDTFHLGIFVLVAAAFF 192 (445)
Q Consensus 174 ~~~~g~P~gIav~~~a~~v 192 (445)
......|.||++..+-.|+
T Consensus 518 ~~~l~~P~glav~~~~ly~ 536 (619)
T 3s94_A 518 EDKIPHIFGFTLLGDYVYW 536 (619)
T ss_dssp ECCCCSSCCEEEETTEEEE
T ss_pred ccCCCCcEEEEEECCEEEE
Confidence 2345578899887653333
No 21
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.39 E-value=1.8e-11 Score=123.98 Aligned_cols=133 Identities=14% Similarity=0.119 Sum_probs=104.3
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.+|++++ ++.||++|..+++|+++++++. .+..+... .+..|.|||+|+ .|+|||+|
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~---------------~~~~p~glavd~~~g~lY~~d 177 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVST---------------GLESPGGLAVDWVHDKLYWTD 177 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CEEEEECS---------------SCSCCCCEEEETTTTEEEEEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---CcEEEEeC---------------CCCCccEEEEEeCCCeEEEEc
Confidence 5799999996 7889999999999999999852 23344322 266899999996 78899999
Q ss_pred CCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCC-CeEEEEECCCCceeec-
Q 013321 99 TMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIREIQLHDDDCSDN- 174 (445)
Q Consensus 99 ~~N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn-~rIr~i~l~~~~~~~~- 174 (445)
..+++|.+++.+| ..++.. ..+..|.+|++...++.||++|.++ ++|+++++++......
T Consensus 178 ~~~~~I~~~~~dg~~~~~l~~----------------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 178 SGTSRIEVANLDGAHRKVLLW----------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp TTTTEEEECBTTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred CCCCeEEEEeCCCCceEEeec----------------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 9999999999887 233311 2356899998544688999999998 9999999998654432
Q ss_pred -CCCCccceEEEEe
Q 013321 175 -YDDTFHLGIFVLV 187 (445)
Q Consensus 175 -~~~g~P~gIav~~ 187 (445)
.....|.||++..
T Consensus 242 ~~~~~~PnGlavd~ 255 (386)
T 3v65_B 242 DTHLFWPNGLTIDY 255 (386)
T ss_dssp CSSCSCEEEEEEEG
T ss_pred ECCCCCeeeEEEeC
Confidence 3455799999984
No 22
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.38 E-value=2.2e-11 Score=119.64 Aligned_cols=126 Identities=21% Similarity=0.261 Sum_probs=94.2
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcC-CCcEEEEeCCC-CeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCc
Q 013321 6 GGYTVETVFEGSKFGMEPFSVAVSP-SGELLVLDSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHP 83 (445)
Q Consensus 6 ~G~~v~tv~~Gs~~g~~P~gIAVdp-dG~LYVaDs~n-~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P 83 (445)
+|....++... ....|.+|++|| +|.||++|.++ ++|.+++++| ....+... ..+..|
T Consensus 107 ~g~~~~~~~~~--~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG----~~~~~~~~--------------~~~~~P 166 (316)
T 1ijq_A 107 KGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG----VDIYSLVT--------------ENIQWP 166 (316)
T ss_dssp TSSSEEEEEEC--TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS----CCEEEEEC--------------SSCSCE
T ss_pred CCCceEEEEEC--CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC----CCeEEEEE--------------CCCCCc
Confidence 34444444432 235899999998 78899999886 8999999984 33332221 137799
Q ss_pred ceEEEcC-CCCEEEEeCCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCe
Q 013321 84 KGLAVDD-RGNIYIADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQA 160 (445)
Q Consensus 84 ~GIavD~-dG~LYVAD~~N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~r 160 (445)
+||++|+ ++.|||+|..+++|.+++.+| ..++... ...+..|.+|++ + ++.||++|.++++
T Consensus 167 ~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~--------------~~~~~~P~giav-~-~~~ly~~d~~~~~ 230 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED--------------EKRLAHPFSLAV-F-EDKVFWTDIINEA 230 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC--------------TTTTSSEEEEEE-E-TTEEEEEETTTTE
T ss_pred eEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeec--------------CCccCCcEEEEE-E-CCEEEEEECCCCe
Confidence 9999996 567999999999999999887 3443221 123568999974 4 5899999999999
Q ss_pred EEEEECC
Q 013321 161 IREIQLH 167 (445)
Q Consensus 161 Ir~i~l~ 167 (445)
|.++++.
T Consensus 231 V~~~~~~ 237 (316)
T 1ijq_A 231 IFSANRL 237 (316)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 9999974
No 23
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.38 E-value=2.6e-11 Score=114.49 Aligned_cols=134 Identities=15% Similarity=0.109 Sum_probs=100.9
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|++|++|+ ++.|||+|..+++|.+++.++. ....+... .+..|.+|++|+ .|.|||+|
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~---------------~~~~p~~ia~d~~~~~lyv~d 97 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG---EPTTIIRQ---------------DLGSPEGIALDHLGRTIFWTD 97 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSC---CCEEEECT---------------TCCCEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCC---CcEEEEEC---------------CCCCccEEEEEecCCeEEEEE
Confidence 3689999998 5789999999999999999853 23333211 267899999998 47899999
Q ss_pred CCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECC--CCeEEEEECCCCceeec
Q 013321 99 TMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG--NQAIREIQLHDDDCSDN 174 (445)
Q Consensus 99 ~~N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~g--n~rIr~i~l~~~~~~~~ 174 (445)
..+++|.+++.+| ..++.. ..+..|.+|++...++.|||+|.+ +++|.++++++......
T Consensus 98 ~~~~~I~~~~~~g~~~~~~~~----------------~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 98 SQLDRIEVAKMDGTQRRVLFD----------------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp TTTTEEEEEETTSCSCEEEEC----------------SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEE----------------CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 9999999999887 233211 124578999754347899999987 78999999987554322
Q ss_pred --CCCCccceEEEEec
Q 013321 175 --YDDTFHLGIFVLVA 188 (445)
Q Consensus 175 --~~~g~P~gIav~~~ 188 (445)
.....|.++++...
T Consensus 162 ~~~~~~~P~gia~d~~ 177 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAF 177 (267)
T ss_dssp ECTTCSCEEEEEEETT
T ss_pred EECCCCCCcEEEEcCC
Confidence 33457899998763
No 24
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.37 E-value=1.7e-11 Score=132.77 Aligned_cols=138 Identities=15% Similarity=0.121 Sum_probs=106.1
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.|||||. .|+||++|..+++|.+++++|.. ..++... .|..|.+|++|+ +|.||++|
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~---~~~l~~~---------------~l~~P~~iavdp~~G~lY~tD 141 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH---RQVLVWK---------------DLDSPRALALDPAEGFMYWTE 141 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT---CEEEECS---------------SCCCEEEEEEETTTTEEEEEE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc---EEEEEeC---------------CCCCcccEEEccCCCeEEEeC
Confidence 4799999997 68899999999999999998532 2333211 378999999997 78999999
Q ss_pred CC-CCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-c
Q 013321 99 TM-NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-N 174 (445)
Q Consensus 99 ~~-N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~-~ 174 (445)
++ +.+|.+++.+| +.++.. .+.+|++|++...++.||++|.++++|+++++++..... .
T Consensus 142 ~g~~~~I~r~~~dG~~~~~l~~-----------------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~ 204 (628)
T 4a0p_A 142 WGGKPKIDRAAMDGSERTTLVP-----------------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA 204 (628)
T ss_dssp CSSSCEEEEEETTSCSCEEEEC-----------------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCCCCEEEEEeCCCCceEEEEC-----------------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEee
Confidence 87 89999999888 344321 256899998655578999999999999999998854332 2
Q ss_pred CCCCccceEEEEeccceEE
Q 013321 175 YDDTFHLGIFVLVAAAFFG 193 (445)
Q Consensus 175 ~~~g~P~gIav~~~a~~vg 193 (445)
.....|.|+++..+..++.
T Consensus 205 ~~l~~P~glav~~~~ly~t 223 (628)
T 4a0p_A 205 DDLPHPFGLTQYQDYIYWT 223 (628)
T ss_dssp ECCSCEEEEEEETTEEEEE
T ss_pred ccCCCceEEEEECCEEEEe
Confidence 3345788888876544443
No 25
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.36 E-value=3e-11 Score=119.81 Aligned_cols=131 Identities=19% Similarity=0.201 Sum_probs=97.0
Q ss_pred CCCceEEEEcC-CCcEEEEeCC-CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEE
Q 013321 20 GMEPFSVAVSP-SGELLVLDSE-NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 96 (445)
Q Consensus 20 g~~P~gIAVdp-dG~LYVaDs~-n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYV 96 (445)
...|.+|++|+ .|.||++|.+ +++|.+++++|. ....++.. .+..|+||++|+ ++.|||
T Consensus 121 ~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---~~~~~~~~---------------~l~~Pnglavd~~~~~lY~ 182 (318)
T 3sov_A 121 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS---SRFIIINS---------------EIYWPNGLTLDYEEQKLYW 182 (318)
T ss_dssp CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC---SCEEEECS---------------SCSCEEEEEEETTTTEEEE
T ss_pred CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC---CeEEEEEC---------------CCCCccEEEEeccCCEEEE
Confidence 46899999998 6899999975 799999999852 12233221 378999999997 677999
Q ss_pred EeCCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC-CCceee
Q 013321 97 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH-DDDCSD 173 (445)
Q Consensus 97 AD~~N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~-~~~~~~ 173 (445)
+|+.+++|.+++.+| ..++.. ..+..|.+|++ + ++.||++|.++++|.++++. +.....
T Consensus 183 aD~~~~~I~~~d~dG~~~~~~~~----------------~~~~~P~glav-~-~~~lywtd~~~~~V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 183 ADAKLNFIHKSNLDGTNRQAVVK----------------GSLPHPFALTL-F-EDILYWTDWSTHSILACNKYTGEGLRE 244 (318)
T ss_dssp EETTTTEEEEEETTSCSCEEEEC----------------SCCSCEEEEEE-E-TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EECCCCEEEEEcCCCCceEEEec----------------CCCCCceEEEE-e-CCEEEEEecCCCeEEEEECCCCCceEE
Confidence 999999999999887 333321 13568999974 4 56999999999999999984 433222
Q ss_pred -cCCCCccceEEEE
Q 013321 174 -NYDDTFHLGIFVL 186 (445)
Q Consensus 174 -~~~~g~P~gIav~ 186 (445)
......|.+|++.
T Consensus 245 i~~~~~~P~~i~v~ 258 (318)
T 3sov_A 245 IHSDIFSPMDIHAF 258 (318)
T ss_dssp EECCCSSCCCEEEE
T ss_pred EeCCCCCCcEEEEe
Confidence 2233456666654
No 26
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.36 E-value=5.4e-11 Score=112.08 Aligned_cols=136 Identities=18% Similarity=0.283 Sum_probs=101.8
Q ss_pred CCceEEEE-cCCCcEEEEeCC-CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEe
Q 013321 21 MEPFSVAV-SPSGELLVLDSE-NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAV-dpdG~LYVaDs~-n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 98 (445)
..|.+|++ +++|+|||++.. +++|.+++.+ |+.....+. ..+..|.+|+++++|+|||+|
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~----g~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~ 138 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY----GQFVRKFGA--------------TILQHPRGVTVDNKGRIIVVE 138 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECTT----SCEEEEECT--------------TTCSCEEEEEECTTSCEEEEE
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECCC----CcEEEEecC--------------ccCCCceEEEEeCCCCEEEEE
Confidence 57999999 579999999975 8999999976 443333222 135689999999999999999
Q ss_pred CCCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeecCCC-
Q 013321 99 TMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYDD- 177 (445)
Q Consensus 99 ~~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~~~~- 177 (445)
..+++|.+++.+|......+. ...+..|.+|+ ++++|.|||+|..+++|++++..+.........
T Consensus 139 ~~~~~i~~~~~~g~~~~~~~~-------------~~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g 204 (286)
T 1q7f_A 139 CKVMRVIIFDQNGNVLHKFGC-------------SKHLEFPNGVV-VNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEG 204 (286)
T ss_dssp TTTTEEEEECTTSCEEEEEEC-------------TTTCSSEEEEE-ECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTT
T ss_pred CCCCEEEEEcCCCCEEEEeCC-------------CCccCCcEEEE-ECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCC
Confidence 999999999988843221110 12345788886 688999999999999999999877654433222
Q ss_pred --CccceEEEEec
Q 013321 178 --TFHLGIFVLVA 188 (445)
Q Consensus 178 --g~P~gIav~~~ 188 (445)
..|.+|++...
T Consensus 205 ~~~~p~~i~~d~~ 217 (286)
T 1q7f_A 205 ITNYPIGVGINSN 217 (286)
T ss_dssp TSCSEEEEEECTT
T ss_pred ccCCCcEEEECCC
Confidence 46777777643
No 27
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.34 E-value=5e-11 Score=121.58 Aligned_cols=138 Identities=20% Similarity=0.130 Sum_probs=103.4
Q ss_pred CCCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCC-CccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEE
Q 013321 20 GMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPY-SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 96 (445)
Q Consensus 20 g~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~-G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYV 96 (445)
...|.+|++++ ++.||++|..+++|++++.++... +....++.. .+..|.|||+|. .++|||
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~---------------~~~~p~glavD~~~~~lY~ 175 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR---------------DIQAPDGLAVDWIHSNIYW 175 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS---------------SCSCEEEEEEETTTTEEEE
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC---------------CCCCcccEEEEecCCceEE
Confidence 36799999997 688999999999999999875210 122333322 367899999997 788999
Q ss_pred EeCCCCEEEEEcCCCc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECC-CCeEEEEECCCCceee
Q 013321 97 ADTMNMAIRKISDTGV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-NQAIREIQLHDDDCSD 173 (445)
Q Consensus 97 AD~~N~rIrkfd~dGv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~g-n~rIr~i~l~~~~~~~ 173 (445)
+|..+++|.+++.+|. .++.. ..+..|.+|++....|.||++|.+ +++|+++++++.....
T Consensus 176 ~d~~~~~I~~~~~~g~~~~~l~~----------------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 176 TDSVLGTVSVADTKGVKRKTLFR----------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp EETTTTEEEEECTTTCSEEEEEE----------------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred EECCCCeEEEEeCCCCceEEEEe----------------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 9999999999998882 33311 135679999854568899999987 5899999999865443
Q ss_pred c--CCCCccceEEEEec
Q 013321 174 N--YDDTFHLGIFVLVA 188 (445)
Q Consensus 174 ~--~~~g~P~gIav~~~ 188 (445)
. .....|.||+++..
T Consensus 240 ~~~~~l~~P~glavd~~ 256 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLL 256 (400)
T ss_dssp EECSSCSCEEEEEEETT
T ss_pred EEECCCCceEEEEEEeC
Confidence 2 34568999999843
No 28
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.31 E-value=7.4e-11 Score=131.17 Aligned_cols=138 Identities=19% Similarity=0.109 Sum_probs=103.2
Q ss_pred CCCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCC-CccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCC-CEEE
Q 013321 20 GMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPY-SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG-NIYI 96 (445)
Q Consensus 20 g~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~-G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG-~LYV 96 (445)
...|.+|++++ ++.||++|..+++|++++.++... +....++.. .|..|.|||||..+ +|||
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~---------------~l~~P~GLAvD~~~~~LY~ 487 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR---------------DIQAPDGLAVDWIHSNIYW 487 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS---------------SCSCCCEEEEETTTTEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec---------------CCCCcceeeeeecCCcEEE
Confidence 35799999998 788999999999999999885311 223344332 37799999999754 7999
Q ss_pred EeCCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCC-CeEEEEECCCCceee
Q 013321 97 ADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIREIQLHDDDCSD 173 (445)
Q Consensus 97 AD~~N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn-~rIr~i~l~~~~~~~ 173 (445)
+|..+++|.+++.+| ..++.. ..+..|.+|++....|.||++|.++ ++|+++++++.....
T Consensus 488 tD~~~~~I~v~~ldG~~~~~l~~----------------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 488 TDSVLGTVSVADTKGVKRKTLFR----------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp EETTTTEEEEEETTSSSEEEEEE----------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred EecCCCeEEEEeCCCCeEEEEEe----------------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 999999999999988 233321 1356799998555569999999987 999999999876544
Q ss_pred c--CCCCccceEEEEec
Q 013321 174 N--YDDTFHLGIFVLVA 188 (445)
Q Consensus 174 ~--~~~g~P~gIav~~~ 188 (445)
. .....|.||+++..
T Consensus 552 lv~~~l~~P~GLavD~~ 568 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLL 568 (791)
T ss_dssp EECSSCSCEEEEEEETT
T ss_pred EEeCCCCCceEEEEecC
Confidence 3 33468999999843
No 29
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.31 E-value=4.9e-11 Score=129.14 Aligned_cols=139 Identities=13% Similarity=0.150 Sum_probs=105.8
Q ss_pred CCCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEE
Q 013321 20 GMEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIA 97 (445)
Q Consensus 20 g~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVA 97 (445)
...|.|||||. .++||++|+.+++|.+++.+| ....+... ..++.|.+||+|+ +|.||++
T Consensus 388 ~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G----~~~~~l~~--------------~~l~~Pr~iavdp~~g~ly~t 449 (628)
T 4a0p_A 388 EIQPYDLSIDIYSRYIYWTCEATNVINVTRLDG----RSVGVVLK--------------GEQDRPRAVVVNPEKGYMYFT 449 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTS----CEEEEEEE--------------CTTCCEEEEEEETTTTEEEEE
T ss_pred cCCcceEEeeccCCeEEEEcCCCCEEEEEECCC----CeEEEEEe--------------CCCCceeeEEEecCCCeEEEe
Confidence 35799999998 477999999999999999984 43322211 1377899999999 8999999
Q ss_pred eCCCC--EEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee
Q 013321 98 DTMNM--AIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 173 (445)
Q Consensus 98 D~~N~--rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~ 173 (445)
|++++ +|.+++.+| ..++.. ..+.+|++|++...++.||++|..+++|.++++++.....
T Consensus 450 D~g~~~~~I~r~~~dG~~~~~l~~----------------~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~ 513 (628)
T 4a0p_A 450 NLQERSPKIERAALDGTEREVLFF----------------SGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIV 513 (628)
T ss_dssp EEETTEEEEEEEETTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ecCCCCCeEEEEeCCCCCcEEEEe----------------ccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEE
Confidence 99977 799999998 333321 1367899998655568999999999999999998865443
Q ss_pred c--CCCCccceEEEEeccceE
Q 013321 174 N--YDDTFHLGIFVLVAAAFF 192 (445)
Q Consensus 174 ~--~~~g~P~gIav~~~a~~v 192 (445)
. .....|.||++..+-.++
T Consensus 514 ~~~~~~~~P~glav~~~~ly~ 534 (628)
T 4a0p_A 514 LEDSNILQPVGLTVFENWLYW 534 (628)
T ss_dssp EECSSCSCEEEEEEETTEEEE
T ss_pred EEcCCCCCcEEEEEECCEEEE
Confidence 3 234567888776543333
No 30
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.30 E-value=6.2e-11 Score=109.95 Aligned_cols=134 Identities=19% Similarity=0.260 Sum_probs=98.0
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
..|.+|+++++|+|||+|..+++|.+++... .... ... ...+..|.+|+++++|+|||+|..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~---~~~~-~~~--------------~~~~~~p~~i~~~~~g~l~v~~~~ 169 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGS---KTQT-VLP--------------FTGLNDPDGVAVDNSGNVYVTDTD 169 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTC---CSCE-ECC--------------CCSCCSCCCEEECTTCCEEEEEGG
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCC---ceeE-eec--------------cccCCCceeEEEeCCCCEEEEECC
Confidence 5799999999999999999999999996532 1111 110 113668999999999999999999
Q ss_pred CCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeecCC--CC
Q 013321 101 NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYD--DT 178 (445)
Q Consensus 101 N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~~~--~g 178 (445)
+++|.+++.++....... ...+..|.+|+ ++++|.|||++..+++|.++++.+........ ..
T Consensus 170 ~~~i~~~~~~~~~~~~~~--------------~~~~~~p~~i~-~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~ 234 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLP--------------FTDITAPWGIA-VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLN 234 (270)
T ss_dssp GTEEEEECTTTCCEEECC--------------CSSCCSEEEEE-ECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCS
T ss_pred CCEEEEEecCCCceEeec--------------ccCCCCceEEE-ECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCC
Confidence 999999998773322110 11235788886 68899999999999999999988765443222 23
Q ss_pred ccceEEEEe
Q 013321 179 FHLGIFVLV 187 (445)
Q Consensus 179 ~P~gIav~~ 187 (445)
.|.++++..
T Consensus 235 ~p~~i~~~~ 243 (270)
T 1rwi_B 235 TPLAVAVDS 243 (270)
T ss_dssp CEEEEEECT
T ss_pred CceeEEECC
Confidence 466666543
No 31
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.29 E-value=3.6e-11 Score=129.98 Aligned_cols=134 Identities=16% Similarity=0.120 Sum_probs=101.2
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.|||||. .++||++|..+++|.+++.+|. ...++... .|+.|.+|++|+ +|.||++|
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~---~~~~l~~~---------------~l~~P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS---LRKVLFWQ---------------ELDQPRAIALDPSSGFMYWTD 145 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECS---------------SCSCCCCEEEETTTTEEEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC---CEEEEEeC---------------CCCCCceEEEecCCCeEEEec
Confidence 5799999998 7789999999999999999852 22333321 378999999998 57899999
Q ss_pred CC-CCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeecC
Q 013321 99 TM-NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY 175 (445)
Q Consensus 99 ~~-N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~~ 175 (445)
++ +.+|.+++.+| ..++.. ..+.+|++|++...++.||++|..+++|+++++++.......
T Consensus 146 ~g~~~~I~r~~~dG~~~~~l~~----------------~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~ 209 (619)
T 3s94_A 146 WGEVPKIERAGMDGSSRFIIIN----------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV 209 (619)
T ss_dssp CSSSCEEEEEETTSCSCEEEEC----------------SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---
T ss_pred cCCCCEEEEEECCCCceEEEEe----------------CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEE
Confidence 87 68999999988 333321 136789999865567999999999999999999885543322
Q ss_pred --CCCccceEEEEec
Q 013321 176 --DDTFHLGIFVLVA 188 (445)
Q Consensus 176 --~~g~P~gIav~~~ 188 (445)
....|.||++...
T Consensus 210 ~~~~~~P~gi~~~~~ 224 (619)
T 3s94_A 210 KGSLPHPFALTLFED 224 (619)
T ss_dssp ------CCCEEESSS
T ss_pred eCCCCCceEEEEeCC
Confidence 3456888887654
No 32
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.28 E-value=3.9e-10 Score=105.14 Aligned_cols=135 Identities=15% Similarity=0.223 Sum_probs=100.8
Q ss_pred CCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 20 GMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
...|.+|+++++|+|||++..++.|.+++.+ +++..+... ..+..|.+|++|++|+|||++.
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~--------------~~~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITNT----GKLEEYPLP--------------TNAAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECTT----CCEEEEECS--------------STTCCEEEEEECTTSSEEEEET
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECCC----CcEEEeeCC--------------CCCCCcceEEECCCCCEEEEcc
Confidence 4679999999999999999999999999986 444443211 1256899999999999999999
Q ss_pred CCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeec--CCC
Q 013321 100 MNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--YDD 177 (445)
Q Consensus 100 ~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~--~~~ 177 (445)
.+++|.+++.+|....... ...+..|.+|+ ++++|.|||++.++++|.++++.+....+. ...
T Consensus 207 ~~~~i~~~~~~g~~~~~~~--------------~~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~ 271 (300)
T 2qc5_A 207 MGNKIGRITTTGEISEYDI--------------PTPNARPHAIT-AGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTEN 271 (300)
T ss_dssp TTTEEEEECTTCCEEEEEC--------------SSTTCCEEEEE-ECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTT
T ss_pred CCCEEEEEcCCCcEEEEEC--------------CCCCCCceEEE-ECCCCCEEEeccCCCeEEEECCCCcEEEEECCccC
Confidence 9999999998774332110 01245688886 688999999999999999999865443331 123
Q ss_pred CccceEEEEe
Q 013321 178 TFHLGIFVLV 187 (445)
Q Consensus 178 g~P~gIav~~ 187 (445)
..|.+|++..
T Consensus 272 ~~~~~i~~~~ 281 (300)
T 2qc5_A 272 AEPHGITFGK 281 (300)
T ss_dssp CCCCCEEECT
T ss_pred CccceeEeCC
Confidence 4566776653
No 33
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.27 E-value=4.3e-11 Score=111.07 Aligned_cols=115 Identities=24% Similarity=0.386 Sum_probs=90.2
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
..|.+|+++++|+|||++..+++|.+++.++. ...... ...+..|.+|++|++|+|||++..
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~----~~~~~~--------------~~~~~~p~~i~~d~~g~l~v~~~~ 211 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN----NQVVLP--------------FTDITAPWGIAVDEAGTVYVTEHN 211 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTC----CEEECC--------------CSSCCSEEEEEECTTCCEEEEETT
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCC----ceEeec--------------ccCCCCceEEEECCCCCEEEEECC
Confidence 47999999999999999999999999998742 221111 012578999999999999999999
Q ss_pred CCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 101 NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 101 N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
+++|.+++.++....... ...+..|.+|+ ++++|.|||+|.++++|++|++..
T Consensus 212 ~~~v~~~~~~~~~~~~~~--------------~~~~~~p~~i~-~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 212 TNQVVKLLAGSTTSTVLP--------------FTGLNTPLAVA-VDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp TSCEEEECTTCSCCEECC--------------CCSCSCEEEEE-ECTTCCEEEEEGGGTEEEEECCCG
T ss_pred CCcEEEEcCCCCcceeec--------------cCCCCCceeEE-ECCCCCEEEEECCCCEEEEEcCCC
Confidence 999999998873222110 11246788886 688999999999999999999765
No 34
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.21 E-value=3.7e-11 Score=131.47 Aligned_cols=134 Identities=17% Similarity=0.149 Sum_probs=100.1
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.||||+. .|+|||+|..+++|.++++++. ...+++.. .+..|.||++|+ .|.|||+|
T Consensus 453 ~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~---~~~~l~~~---------------~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 453 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------QGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp --CCCEECCCSSSBCEECCTTTSCEEEEBSSSC---CEEEECCC---------------SSCCCCCEECCSSSSCCEECC
T ss_pred CCcceEEEEeeCCcEEEEeccCCeEEEEecCCC---ceEEEEeC---------------CCCCcceEEEccCCCcEEEcc
Confidence 4799999995 7899999999999999999842 23333221 367899999998 67899999
Q ss_pred CCC-CEEEEEcCCCc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeecC
Q 013321 99 TMN-MAIRKISDTGV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY 175 (445)
Q Consensus 99 ~~N-~rIrkfd~dGv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~~ 175 (445)
+++ ++|.+++.+|. .++. ...|..|++|++....+.|||+|..+++|+++++++.......
T Consensus 515 ~~~~~~I~~~~~dG~~~~~l~----------------~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~ 578 (699)
T 1n7d_A 515 WGTPAKIKKGGLNGVDIYSLV----------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 578 (699)
T ss_dssp CSSSCCEEBCCSSSCCCCEES----------------CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEEC
T ss_pred cCCCCeEEEEeCCCCCeeEEE----------------eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEE
Confidence 886 89999998872 2221 1136789999853356899999999999999999875433321
Q ss_pred ----CCCccceEEEEec
Q 013321 176 ----DDTFHLGIFVLVA 188 (445)
Q Consensus 176 ----~~g~P~gIav~~~ 188 (445)
....|.+|++...
T Consensus 579 ~~~~~~~~P~glavd~~ 595 (699)
T 1n7d_A 579 EDEKRLAHPFSLAVFED 595 (699)
T ss_dssp CCSSSCSSCCCCEEETT
T ss_pred ecCCcCCCceEeEEECC
Confidence 2356888888764
No 35
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.21 E-value=1.6e-09 Score=101.07 Aligned_cols=135 Identities=11% Similarity=0.132 Sum_probs=100.3
Q ss_pred CCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 20 GMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
+..|.+|+++++|+|||++..++.|.+++.+ |++..+... ..+..|.+|++|++|+|||++.
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~--------------~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD----GTIYEYDLP--------------NKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTT----SCEEEEECS--------------STTCCEEEEEECTTSSEEEEET
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCC----CCEEEccCC--------------CCCCCceeEEECCCCCEEEEec
Confidence 3679999999999999999989999999987 444433211 0245899999999999999999
Q ss_pred CCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeec--CCC
Q 013321 100 MNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--YDD 177 (445)
Q Consensus 100 ~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~--~~~ 177 (445)
.+++|.+++.+|..+.... ...+..|.+|+ ++++|.|||++..+++|.++++.+...... ...
T Consensus 165 ~~~~i~~~~~~g~~~~~~~--------------~~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~ 229 (300)
T 2qc5_A 165 QNNSIGRITNTGKLEEYPL--------------PTNAAAPVGIT-SGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPN 229 (300)
T ss_dssp TTTEEEEECTTCCEEEEEC--------------SSTTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTT
T ss_pred CCCeEEEECCCCcEEEeeC--------------CCCCCCcceEE-ECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCC
Confidence 9999999998774332110 11245688886 688999999999999999999865443331 223
Q ss_pred CccceEEEEe
Q 013321 178 TFHLGIFVLV 187 (445)
Q Consensus 178 g~P~gIav~~ 187 (445)
..|.+|++..
T Consensus 230 ~~~~~i~~d~ 239 (300)
T 2qc5_A 230 ARPHAITAGK 239 (300)
T ss_dssp CCEEEEEECS
T ss_pred CCceEEEECC
Confidence 4566666654
No 36
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.21 E-value=1.5e-10 Score=112.39 Aligned_cols=135 Identities=14% Similarity=0.101 Sum_probs=96.5
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|.||++++ +|+|||+|.. +.|+++++++ +.+..++... .+ ..++.|++|++|+ +|+|||+|
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~---g~~~~~~~~~-------~~----~~~~~p~~i~~d~~~G~l~v~d 144 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGSEG---GHATQLATSV-------DG----VPFKWLYAVTVDQRTGIVYFTD 144 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECTTC---EECEEEESEE-------TT----EECSCEEEEEECTTTCCEEEEE
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeCCC---CEEEEecccC-------CC----CcccccceEEEecCCCEEEEEC
Confidence 4699999997 8999999986 4599998873 4455554321 11 2477899999999 99999999
Q ss_pred CCC-----------------CEEEEEcCC-Cc-EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCC
Q 013321 99 TMN-----------------MAIRKISDT-GV-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGN 158 (445)
Q Consensus 99 ~~N-----------------~rIrkfd~d-Gv-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn 158 (445)
..+ ++|.++|.+ +. ..+. ..+..|++|+ ++++| .|||+|..+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-----------------~~~~~p~gia-~~~dg~~lyv~d~~~ 206 (322)
T 2fp8_A 145 VSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL-----------------KELHVPGGAE-VSADSSFVLVAEFLS 206 (322)
T ss_dssp SCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE-----------------EEESCCCEEE-ECTTSSEEEEEEGGG
T ss_pred CcccccccccceehcccCCCceEEEEeCCCCEEEEec-----------------cCCccCcceE-ECCCCCEEEEEeCCC
Confidence 763 679999875 42 2221 1245788986 57777 599999999
Q ss_pred CeEEEEECCCCc----eeecCCCCccceEEEEecc
Q 013321 159 QAIREIQLHDDD----CSDNYDDTFHLGIFVLVAA 189 (445)
Q Consensus 159 ~rIr~i~l~~~~----~~~~~~~g~P~gIav~~~a 189 (445)
++|++|++++.. .......+ |.+|+++..+
T Consensus 207 ~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G 240 (322)
T 2fp8_A 207 HQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADG 240 (322)
T ss_dssp TEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTS
T ss_pred CeEEEEECCCCcCCccceEEeCCC-CCCeEECCCC
Confidence 999999987521 11111223 8888776543
No 37
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.17 E-value=2.8e-09 Score=99.28 Aligned_cols=133 Identities=14% Similarity=0.184 Sum_probs=97.5
Q ss_pred CCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 20 GMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
+..|.+|+++++|+|||++..++.|.+++.+ +++..+... ..+..|.+|++|++|+|||++.
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITES----GDITEFKIP--------------TPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT----CCEEEEECS--------------STTCCEEEEEECTTSSEEEEET
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcCC----CcEEEeeCC--------------CCCCcceeEEECCCCCEEEEcc
Confidence 4579999999999999999989999999985 455443221 1256799999999999999999
Q ss_pred CCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeec--CCC
Q 013321 100 MNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--YDD 177 (445)
Q Consensus 100 ~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~--~~~ 177 (445)
.+++|.+++.+|....... ...+..|.+|+ ++++|.|||++..+++|.++++.+...... ...
T Consensus 202 ~~~~i~~~~~~g~~~~~~~--------------~~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~ 266 (299)
T 2z2n_A 202 IGNKIGRITTSGEITEFKI--------------PTPNARPHAIT-AGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKS 266 (299)
T ss_dssp TTTEEEEECTTCCEEEEEC--------------SSTTCCEEEEE-ECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSS
T ss_pred CCceEEEECCCCcEEEEEC--------------CCCCCCceeEE-ECCCCCEEEeccCCceEEEECCCCceEEEeCCCCC
Confidence 9999999998774322100 01245688886 688999999999999999999865333221 122
Q ss_pred CccceEEE
Q 013321 178 TFHLGIFV 185 (445)
Q Consensus 178 g~P~gIav 185 (445)
..|.++++
T Consensus 267 ~~~~~i~~ 274 (299)
T 2z2n_A 267 AEPHGICF 274 (299)
T ss_dssp CCEEEEEE
T ss_pred CccceEEe
Confidence 34555555
No 38
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.13 E-value=1.8e-09 Score=102.53 Aligned_cols=148 Identities=14% Similarity=0.136 Sum_probs=106.8
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcc
Q 013321 6 GGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPK 84 (445)
Q Consensus 6 ~G~~v~tv~~Gs~~g~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~ 84 (445)
.+..++.+..+ ...|.+++++++|+ ||++|..+++|.++++++ + ...+... ...|.
T Consensus 16 ~~~~~~~l~~~---~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~---~-~~~~~~~----------------~~~~~ 72 (296)
T 3e5z_A 16 AGAEARRLADG---FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG---Q-LSPEMHP----------------SHHQN 72 (296)
T ss_dssp TTCCCEEEECC---CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS---C-EEEEESS----------------CSSEE
T ss_pred CCCcEEEEecC---CccccCCeEeCCCCEEEEEeCCCCEEEEEECCC---C-eEEEECC----------------CCCcc
Confidence 45556666653 34699999999998 999999999999999984 3 4443321 23689
Q ss_pred eEEEcCCCCEEEEeCCCCEEEEEcC-CCc-EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEEC------
Q 013321 85 GLAVDDRGNIYIADTMNMAIRKISD-TGV-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR------ 156 (445)
Q Consensus 85 GIavD~dG~LYVAD~~N~rIrkfd~-dGv-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~------ 156 (445)
+|+++++|+|||++..+++|.++|. +|. ..+.... ....+..|.+++ ++++|+|||+|.
T Consensus 73 ~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~------------~~~~~~~~~~i~-~d~~G~l~vtd~~~g~~~ 139 (296)
T 3e5z_A 73 GHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSF------------EGKKLNSPNDVC-LAPDGSLWFSDPTYGIDK 139 (296)
T ss_dssp EEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEE------------TTEECCCCCCEE-ECTTSCEEEEECSHHHHC
T ss_pred eeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeecc------------CCCCCCCCCCEE-ECCCCCEEEECCcccccc
Confidence 9999999999999999999999997 674 3332111 112356788886 689999999975
Q ss_pred -----------CCCeEEEEECCCCceeecCCCCccceEEEEecc
Q 013321 157 -----------GNQAIREIQLHDDDCSDNYDDTFHLGIFVLVAA 189 (445)
Q Consensus 157 -----------gn~rIr~i~l~~~~~~~~~~~g~P~gIav~~~a 189 (445)
.+++|++++..+...........|.++++....
T Consensus 140 ~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg 183 (296)
T 3e5z_A 140 PEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSG 183 (296)
T ss_dssp GGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTS
T ss_pred ccccccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCC
Confidence 246999999875444444455667777765443
No 39
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.13 E-value=2.7e-09 Score=103.33 Aligned_cols=113 Identities=19% Similarity=0.165 Sum_probs=84.7
Q ss_pred CCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 20 GMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
+..|.+|+++++|+|||+|..+++|++++++ +....++..+ ..|.||+++++|+|||||.
T Consensus 31 ~~~pegia~~~~g~lyv~d~~~~~I~~~d~~----g~~~~~~~~~----------------~~p~gia~~~dG~l~vad~ 90 (306)
T 2p4o_A 31 NTFLENLASAPDGTIFVTNHEVGEIVSITPD----GNQQIHATVE----------------GKVSGLAFTSNGDLVATGW 90 (306)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT----CCEEEEEECS----------------SEEEEEEECTTSCEEEEEE
T ss_pred CCCcceEEECCCCCEEEEeCCCCeEEEECCC----CceEEEEeCC----------------CCceeEEEcCCCcEEEEec
Confidence 4689999999999999999999999999987 3444443321 1599999999999999997
Q ss_pred CCC--EEEEEc-CCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 100 MNM--AIRKIS-DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 100 ~N~--rIrkfd-~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
.++ +|.+++ .+| +..++... ....|.+++ +..++.+||+|..+++|++++..+
T Consensus 91 ~~~~~~v~~~d~~~g~~~~~~~~~---------------~~~~~~g~~-~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 91 NADSIPVVSLVKSDGTVETLLTLP---------------DAIFLNGIT-PLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp CTTSCEEEEEECTTSCEEEEEECT---------------TCSCEEEEE-ESSSSEEEEEETTTTEEEEEETTT
T ss_pred cCCcceEEEEcCCCCeEEEEEeCC---------------CccccCccc-ccCCCcEEEEECCCCeEEEEeCCC
Confidence 753 588887 556 44433210 122355664 567778999998889999999765
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.11 E-value=8.1e-09 Score=96.13 Aligned_cols=135 Identities=13% Similarity=0.184 Sum_probs=98.7
Q ss_pred CCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 20 GMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
+..|.+|+++++|.|||++..++.|.+++++ +.+..+... .....|.+|++|++|+|||++.
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~----g~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMNGNRIGRITDD----GKIREYELP--------------NKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT----CCEEEEECS--------------STTCCEEEEEECTTSCEEEEET
T ss_pred CCCceeeEECCCCCEEEEecCCceEEEECCC----CCEEEecCC--------------CCCCCCceEEEcCCCCEEEEeC
Confidence 4579999999999999999989999999985 444443321 0245799999999999999999
Q ss_pred CCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeec--CCC
Q 013321 100 MNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--YDD 177 (445)
Q Consensus 100 ~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~--~~~ 177 (445)
.++.|.++|.+|....... ...+..|.+|+ ++++|.|||++..++.|.++++.+...... ...
T Consensus 160 ~~~~i~~~~~~g~~~~~~~--------------~~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~ 224 (299)
T 2z2n_A 160 QNNAIGRITESGDITEFKI--------------PTPASGPVGIT-KGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPN 224 (299)
T ss_dssp TTTEEEEECTTCCEEEEEC--------------SSTTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTT
T ss_pred CCCEEEEEcCCCcEEEeeC--------------CCCCCcceeEE-ECCCCCEEEEccCCceEEEECCCCcEEEEECCCCC
Confidence 9999999999774332100 01234678886 688899999999999999999854433221 122
Q ss_pred CccceEEEEe
Q 013321 178 TFHLGIFVLV 187 (445)
Q Consensus 178 g~P~gIav~~ 187 (445)
..|.++++..
T Consensus 225 ~~~~~i~~~~ 234 (299)
T 2z2n_A 225 ARPHAITAGA 234 (299)
T ss_dssp CCEEEEEECS
T ss_pred CCceeEEECC
Confidence 4566666653
No 41
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.11 E-value=3.7e-10 Score=123.56 Aligned_cols=127 Identities=21% Similarity=0.263 Sum_probs=92.5
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcC-CCcEEEEeCCC-CeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCc
Q 013321 6 GGYTVETVFEGSKFGMEPFSVAVSP-SGELLVLDSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHP 83 (445)
Q Consensus 6 ~G~~v~tv~~Gs~~g~~P~gIAVdp-dG~LYVaDs~n-~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P 83 (445)
+|....+++.. .+..|.+|||++ .|.||++|.++ ++|.+++++|. ...+... ..|..|
T Consensus 483 dg~~~~~l~~~--~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~----~~~~l~~--------------~~l~~P 542 (699)
T 1n7d_A 483 KGVKRKTLFRE--QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV----DIYSLVT--------------ENIQWP 542 (699)
T ss_dssp SSCCEEEECCC--SSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC----CCCEESC--------------SSCSSC
T ss_pred CCCceEEEEeC--CCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC----CeeEEEe--------------CCCCCc
Confidence 34444444432 235799999998 68899999876 89999998842 2211111 147899
Q ss_pred ceEEEcC-CCCEEEEeCCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCe
Q 013321 84 KGLAVDD-RGNIYIADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQA 160 (445)
Q Consensus 84 ~GIavD~-dG~LYVAD~~N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~r 160 (445)
+|||+|+ .+.|||+|+.+++|.+++.+| ..++... ...+..|.+|++ +. +.|||+|.++++
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~--------------~~~~~~P~glav-d~-~~lywtd~~~~~ 606 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED--------------EKRLAHPFSLAV-FE-DKVFWTDIINEA 606 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCC--------------SSSCSSCCCCEE-ET-TEEEEECSTTTC
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEec--------------CCcCCCceEeEE-EC-CEEEEEeCCCCe
Confidence 9999997 577999999999999999887 3343211 124567889874 54 489999999999
Q ss_pred EEEEECCC
Q 013321 161 IREIQLHD 168 (445)
Q Consensus 161 Ir~i~l~~ 168 (445)
|+++++..
T Consensus 607 V~~~d~~~ 614 (699)
T 1n7d_A 607 IFSANRLT 614 (699)
T ss_dssp EEEEETTT
T ss_pred EEEEEccC
Confidence 99999643
No 42
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.11 E-value=7.3e-10 Score=107.52 Aligned_cols=118 Identities=10% Similarity=0.025 Sum_probs=86.8
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
..|.||+++++|+ |||+|+.+++|++++.++...+....++. +..|.||++|++|+||||+.
T Consensus 185 ~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-----------------~~gP~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 185 HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-----------------IPNPGNIKRNADGHFWVSSS 247 (322)
T ss_dssp SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-----------------CSSEEEEEECTTSCEEEEEE
T ss_pred ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-----------------CCCCCCeEECCCCCEEEEec
Confidence 5799999999986 99999999999999987543333333321 11299999999999999997
Q ss_pred C----------CCEEEEEcCCCcEEE-ecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 100 M----------NMAIRKISDTGVTTI-AGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 100 ~----------N~rIrkfd~dGv~ti-aGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
. +++|.+||.+|..+. .... ++ ..+..|.+++. .++.|||++..+++|.+|++..
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~--------~g----~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEFGNILEVIPLP--------PP----FAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTTSCEEEEEECC--------TT----TTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC--
T ss_pred CcccccccCCCccEEEEECCCCCEEEEEECC--------CC----CccccceEEEE--eCCEEEEeecCCCceEEEeccc
Confidence 6 688999999884322 1111 00 12667787753 5789999999999999999865
Q ss_pred C
Q 013321 169 D 169 (445)
Q Consensus 169 ~ 169 (445)
.
T Consensus 314 ~ 314 (322)
T 2fp8_A 314 K 314 (322)
T ss_dssp -
T ss_pred c
Confidence 3
No 43
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.04 E-value=4.2e-09 Score=101.38 Aligned_cols=145 Identities=12% Similarity=0.119 Sum_probs=103.7
Q ss_pred CcEEEEEecCCCCCCCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcce
Q 013321 7 GYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 85 (445)
Q Consensus 7 G~~v~tv~~Gs~~g~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~G 85 (445)
+..++.+..+. ..+.|++++++|+ ||++|..+++|++++.+ |.+..+... -..|.+
T Consensus 34 ~~~~~~l~~~~---~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~----g~~~~~~~~----------------~~~~~g 90 (305)
T 3dr2_A 34 DARLLTLYDQA---TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED----GTVDVLLDA----------------TAFTNG 90 (305)
T ss_dssp TCCCEEEECCC---SSEEEEEEEGGGTEEEEEETTTTEEEEEETT----SCEEEEEES----------------CSCEEE
T ss_pred CCceEEEecCC---cCccCCeEeCCCCEEEEEECCCCEEEEEeCC----CCEEEEeCC----------------CCccce
Confidence 44566776643 4589999999887 99999999999999886 444444321 236899
Q ss_pred EEEcCCCCEEEEeCCCCEEEEEcCCCc-EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEEC--------
Q 013321 86 LAVDDRGNIYIADTMNMAIRKISDTGV-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-------- 156 (445)
Q Consensus 86 IavD~dG~LYVAD~~N~rIrkfd~dGv-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~-------- 156 (445)
+++|++|+|||++..+++|.+++.+|. ..++... ....++.|++++ ++++|+|||+|.
T Consensus 91 l~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~------------~~~~~~~~~~i~-~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 91 NAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRY------------AGKRLNSPNDLI-VARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTSCEEEEECEE------------TTEECSCCCCEE-ECTTSCEEEECCSGGGSCGG
T ss_pred eeECCCCCEEEEECCCCEEEEECCCCCEEEEEecc------------CCCccCCCCCEE-ECCCCCEEEeCcCCCccccc
Confidence 999999999999999999999998884 3332211 112467789986 689999999974
Q ss_pred ---------CCCeEEEEECCCCc-eeecCCCCccceEEEEec
Q 013321 157 ---------GNQAIREIQLHDDD-CSDNYDDTFHLGIFVLVA 188 (445)
Q Consensus 157 ---------gn~rIr~i~l~~~~-~~~~~~~g~P~gIav~~~ 188 (445)
..+.|+++++.+.. .... ....|.++++...
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPD 198 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTT
T ss_pred cccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCC
Confidence 24689999985433 2222 3445666666443
No 44
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.01 E-value=9.7e-09 Score=97.42 Aligned_cols=137 Identities=15% Similarity=0.174 Sum_probs=98.5
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC-
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT- 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~- 99 (445)
..|.+|+++++|+|||++..+++|.+++... |++..+..... ...++.|.+|++|++|+|||+|.
T Consensus 69 ~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~---g~~~~~~~~~~-----------~~~~~~~~~i~~d~~G~l~vtd~~ 134 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIACSHGLRRLERQREPG---GEWESIADSFE-----------GKKLNSPNDVCLAPDGSLWFSDPT 134 (296)
T ss_dssp SSEEEEEECTTCCEEEEETTTTEEEEECSTT---CCEEEEECEET-----------TEECCCCCCEEECTTSCEEEEECS
T ss_pred CCcceeeECCCCcEEEEecCCCeEEEEcCCC---CcEEEEeeccC-----------CCCCCCCCCEEECCCCCEEEECCc
Confidence 4699999999999999999889999999842 55555543211 12467899999999999999986
Q ss_pred ----------------CCCEEEEEcCCCcE-EEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEE
Q 013321 100 ----------------MNMAIRKISDTGVT-TIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIR 162 (445)
Q Consensus 100 ----------------~N~rIrkfd~dGv~-tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr 162 (445)
..++|.+++.+|.. .+.. .+..|.+++ .+++|.++|+|..+++|+
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~-----------------~~~~~~gi~-~s~dg~~lv~~~~~~~i~ 196 (296)
T 3e5z_A 135 YGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIR-----------------DRVKPNGLA-FLPSGNLLVSDTGDNATH 196 (296)
T ss_dssp HHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEEC-----------------CCSSEEEEE-ECTTSCEEEEETTTTEEE
T ss_pred cccccccccccccccCCCcEEEEECCCCCEEEeec-----------------CCCCCccEE-ECCCCCEEEEeCCCCeEE
Confidence 24689999987733 3211 234677886 588887779999999999
Q ss_pred EEECCC-Cce-----eecCCCCccceEEEEecc
Q 013321 163 EIQLHD-DDC-----SDNYDDTFHLGIFVLVAA 189 (445)
Q Consensus 163 ~i~l~~-~~~-----~~~~~~g~P~gIav~~~a 189 (445)
++++.. ... ......+.|.++++...+
T Consensus 197 ~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G 229 (296)
T 3e5z_A 197 RYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG 229 (296)
T ss_dssp EEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS
T ss_pred EEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC
Confidence 999862 112 112234567777776543
No 45
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.00 E-value=1.3e-08 Score=98.01 Aligned_cols=136 Identities=17% Similarity=0.239 Sum_probs=97.5
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC-
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT- 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~- 99 (445)
..|.+++++++|+|||++..+++|.+++.+ |++..++.... ...++.|++|+++++|+|||+|.
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~----g~~~~~~~~~~-----------~~~~~~~~~i~~d~dG~l~~td~~ 150 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDAD----GQAHLLVGRYA-----------GKRLNSPNDLIVARDGAIWFTDPP 150 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT----SCEEEEECEET-----------TEECSCCCCEEECTTSCEEEECCS
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCC----CCEEEEEeccC-----------CCccCCCCCEEECCCCCEEEeCcC
Confidence 469999999999999999988999999987 55665553211 12478899999999999999985
Q ss_pred ----------------CCCEEEEEcC-CC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCC--
Q 013321 100 ----------------MNMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGN-- 158 (445)
Q Consensus 100 ----------------~N~rIrkfd~-dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn-- 158 (445)
....|.+++. +| +..+. .+..|++++ .++++ .|||+|..+
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~------------------~~~~p~gl~-~spdg~~lyv~~~~~~~ 211 (305)
T 3dr2_A 151 FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA------------------DLDHPNGLA-FSPDEQTLYVSQTPEQG 211 (305)
T ss_dssp GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE------------------EESSEEEEE-ECTTSSEEEEEECCC--
T ss_pred CCccccccccccccccCCCeEEEEcCCCCcEEEEe------------------cCCCCcceE-EcCCCCEEEEEecCCcC
Confidence 1367999997 45 33332 234678886 57777 599999974
Q ss_pred ---CeEEEEECCCCcee-----ecCCCCccceEEEEeccc
Q 013321 159 ---QAIREIQLHDDDCS-----DNYDDTFHLGIFVLVAAA 190 (445)
Q Consensus 159 ---~rIr~i~l~~~~~~-----~~~~~g~P~gIav~~~a~ 190 (445)
++|+++++.+.... .....+.|.+|+++..+.
T Consensus 212 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~ 251 (305)
T 3dr2_A 212 HGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW 251 (305)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC
T ss_pred CCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC
Confidence 89999997653211 112345677777765433
No 46
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.99 E-value=1.5e-08 Score=97.96 Aligned_cols=143 Identities=13% Similarity=0.038 Sum_probs=97.0
Q ss_pred CCceEEEEcCCCcEEEEeCCCC--eEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEe
Q 013321 21 MEPFSVAVSPSGELLVLDSENS--NIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~--rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 98 (445)
..|.+|+++++|+|||+|..++ +|++++.. .|++..++..+ ....|.|+++.+++.+||+|
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~---~g~~~~~~~~~--------------~~~~~~g~~~~~~~~~~v~d 134 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKS---DGTVETLLTLP--------------DAIFLNGITPLSDTQYLTAD 134 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECT---TSCEEEEEECT--------------TCSCEEEEEESSSSEEEEEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCC---CCeEEEEEeCC--------------CccccCcccccCCCcEEEEE
Confidence 4699999999999999997654 58888754 26666665432 13467899998888899999
Q ss_pred CCCCEEEEEcCCC-c-EEE-ecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce----
Q 013321 99 TMNMAIRKISDTG-V-TTI-AGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC---- 171 (445)
Q Consensus 99 ~~N~rIrkfd~dG-v-~ti-aGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~---- 171 (445)
..+++|.++|.++ . .+. ..+. .. . ......|..|++| ....+.|||+|+.+++|++|++++...
T Consensus 135 ~~~g~i~~~d~~~~~~~v~~~~~~-~~-~-----~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~ 205 (306)
T 2p4o_A 135 SYRGAIWLIDVVQPSGSIWLEHPM-LA-R-----SNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP 205 (306)
T ss_dssp TTTTEEEEEETTTTEEEEEEECGG-GS-C-----SSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred CCCCeEEEEeCCCCcEeEEEECCc-cc-c-----ccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCcc
Confidence 9999999999764 1 221 1110 00 0 0112346678887 334568999999999999999875211
Q ss_pred eecCCCCccceEEEEecc
Q 013321 172 SDNYDDTFHLGIFVLVAA 189 (445)
Q Consensus 172 ~~~~~~g~P~gIav~~~a 189 (445)
........|.+|++...+
T Consensus 206 ~~~~~~~~P~gi~vd~dG 223 (306)
T 2p4o_A 206 EIFVEQTNIDDFAFDVEG 223 (306)
T ss_dssp EEEEESCCCSSEEEBTTC
T ss_pred EEEeccCCCCCeEECCCC
Confidence 111112468888887543
No 47
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.98 E-value=1.7e-08 Score=96.86 Aligned_cols=113 Identities=12% Similarity=0.127 Sum_probs=84.7
Q ss_pred CCceEEEEcCCCcEEEEeC-----------CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEc
Q 013321 21 MEPFSVAVSPSGELLVLDS-----------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD 89 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs-----------~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD 89 (445)
..|++|+++++|+|||++. ..++|++++.+ +.+..+.. .+..|+||+++
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~----g~~~~~~~----------------~~~~pngi~~s 157 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD----HHVKKYFD----------------QVDISNGLDWS 157 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT----SCEEEEEE----------------EESBEEEEEEC
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC----CCEEEEee----------------ccccccceEEc
Confidence 5689999999999999984 34689999876 44444432 25679999999
Q ss_pred CCCC-EEEEeCCCCEEEEEc---CCCcEE----EecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeE
Q 013321 90 DRGN-IYIADTMNMAIRKIS---DTGVTT----IAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAI 161 (445)
Q Consensus 90 ~dG~-LYVAD~~N~rIrkfd---~dGv~t----iaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rI 161 (445)
++|. |||+|+.+++|.+++ .+|... +.... .....|.+++ +|++|+|||++.++++|
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~--------------~~~~~p~g~~-~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE--------------KEEQIPDGMC-IDAEGKLWVACYNGGRV 222 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC--------------GGGCEEEEEE-EBTTSCEEEEEETTTEE
T ss_pred CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC--------------CCCCCCCeeE-ECCCCCEEEEEcCCCEE
Confidence 9997 999999999999997 345211 11000 0113577775 79999999999999999
Q ss_pred EEEECCC
Q 013321 162 REIQLHD 168 (445)
Q Consensus 162 r~i~l~~ 168 (445)
.+|+++.
T Consensus 223 ~~~d~~t 229 (297)
T 3g4e_A 223 IRLDPVT 229 (297)
T ss_dssp EEECTTT
T ss_pred EEEcCCC
Confidence 9999873
No 48
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.98 E-value=1.1e-08 Score=102.35 Aligned_cols=133 Identities=20% Similarity=0.250 Sum_probs=92.8
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcce
Q 013321 6 GGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 85 (445)
Q Consensus 6 ~G~~v~tv~~Gs~~g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~G 85 (445)
..+.++.++.+ ...|.+|+++++|+|||+|.. ++|++++ + |....++..+.. ...+..|.|
T Consensus 19 ~~~~~~~va~~---l~~P~~ia~~pdG~l~V~e~~-g~I~~i~-~----g~~~~~~~~~v~----------~~g~~~p~g 79 (352)
T 2ism_A 19 QGLRVEEVVGG---LEVPWALAFLPDGGMLIAERP-GRIRLFR-E----GRLSTYAELSVY----------HRGESGLLG 79 (352)
T ss_dssp -CCCEEEEECC---CSCEEEEEECTTSCEEEEETT-TEEEEEE-T----TEEEEEEECCCC----------CSTTCSEEE
T ss_pred CCcEEEEEECC---CCCceEEEEcCCCeEEEEeCC-CeEEEEE-C----CCccEeecceEe----------ecCCCCcee
Confidence 35677788764 457999999999999999976 8999998 5 455555543210 112568999
Q ss_pred EEEcCC----CCEEEEeCCC-----CEEEEEcCCCc-----EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeE
Q 013321 86 LAVDDR----GNIYIADTMN-----MAIRKISDTGV-----TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSL 151 (445)
Q Consensus 86 IavD~d----G~LYVAD~~N-----~rIrkfd~dGv-----~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~L 151 (445)
|+++++ |.|||+++.+ ++|.+++.++- .++..+. +........|.+|+ ++++|.|
T Consensus 80 ia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~----------p~~~~~~h~~~~l~-~~pdG~L 148 (352)
T 2ism_A 80 LALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGI----------PARPHGLHSGGRIA-FGPDGML 148 (352)
T ss_dssp EEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEE----------CCCTTCCCCCCCEE-ECTTSCE
T ss_pred EEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeC----------CCCCCCCcCCceEE-ECCCCCE
Confidence 999997 7899999865 89999986541 1111100 00011234577886 6899999
Q ss_pred EEEECC-------------CCeEEEEECCC
Q 013321 152 LVIDRG-------------NQAIREIQLHD 168 (445)
Q Consensus 152 yVaD~g-------------n~rIr~i~l~~ 168 (445)
||++.. .++|.+|++++
T Consensus 149 yv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 149 YVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred EEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 999742 36999999886
No 49
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.97 E-value=1.3e-08 Score=102.32 Aligned_cols=151 Identities=21% Similarity=0.187 Sum_probs=102.4
Q ss_pred cCCcEEEEEecCCCCCCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcc
Q 013321 5 EGGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPK 84 (445)
Q Consensus 5 e~G~~v~tv~~Gs~~g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~ 84 (445)
+.++.++.++.+ ...|.+|+++++|+|||++.. ++|++++.+ |. ..+...+.. ...+..|.
T Consensus 16 ~~~~~~~~va~~---l~~P~~ia~~pdG~l~V~e~~-g~I~~~d~~----G~-~~~~~~~v~----------~~g~~g~~ 76 (354)
T 3a9g_A 16 EWKFKISEVASD---LEVPWSIAPLGGGRYLVTERP-GRLVLISPS----GK-KLVASFDVA----------NVGEAGLL 76 (354)
T ss_dssp CCCEEEEEEECS---CSCEEEEEEEETTEEEEEETT-TEEEEECSS----CE-EEEEECCCC----------CSTTCSEE
T ss_pred CCCeEEEEEeCC---CCCCeEEEEcCCCeEEEEeCC-CEEEEEeCC----Cc-eEeecccee----------ecCCCcee
Confidence 567888998874 457999999999999999986 899999865 55 555443200 01245799
Q ss_pred eEEEcCC----CCEEEEeCC---C----CEEEEEcCCCc-------EEEecCcccCCCCCCCCCccCcccCCCceEEEEC
Q 013321 85 GLAVDDR----GNIYIADTM---N----MAIRKISDTGV-------TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVG 146 (445)
Q Consensus 85 GIavD~d----G~LYVAD~~---N----~rIrkfd~dGv-------~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd 146 (445)
||+++++ |.|||++.. + ++|.+++.++. .++.-+. + ......|.+|+ ++
T Consensus 77 gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~----------~--~~~~h~~~~l~-~~ 143 (354)
T 3a9g_A 77 GLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGI----------P--GAYIHNGGRIR-FG 143 (354)
T ss_dssp EEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEE----------E--CCSSCCCCCEE-EC
T ss_pred eEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcC----------C--CCCCcCCceEE-EC
Confidence 9999996 889999974 3 78999985431 1111100 0 11234577776 68
Q ss_pred CCCeEEEEECC-------------CCeEEEEECCCCc---------eeecCCCCccceEEEEe
Q 013321 147 SSCSLLVIDRG-------------NQAIREIQLHDDD---------CSDNYDDTFHLGIFVLV 187 (445)
Q Consensus 147 ~dG~LyVaD~g-------------n~rIr~i~l~~~~---------~~~~~~~g~P~gIav~~ 187 (445)
++|.|||++.. +++|.+|++++.. ..+..+.-.|.||++..
T Consensus 144 pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~ 206 (354)
T 3a9g_A 144 PDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHR 206 (354)
T ss_dssp TTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECT
T ss_pred CCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeC
Confidence 99999999642 3689999988741 12223344567777665
No 50
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.82 E-value=5.7e-08 Score=91.65 Aligned_cols=139 Identities=14% Similarity=0.171 Sum_probs=95.3
Q ss_pred CCceEEEEcCCCcEEEE-------eCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCC-C
Q 013321 21 MEPFSVAVSPSGELLVL-------DSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-G 92 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVa-------Ds~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d-G 92 (445)
..|.+++++++|+|||+ +..+++|.+++... +++..+... .. .+ ....|.+|+++++ |
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~--~~----~~-----~~~~~~~i~~~~~~g 83 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT---GKKTVICKP--EV----NG-----YGGIPAGCQCDRDAN 83 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT---CCEEEEECC--EE----TT-----EECCEEEEEECSSSS
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC---CcEEEEEec--cc----CC-----CCCCCceEEEecCCC
Confidence 57999999999999999 88889999999653 555544321 00 00 1357999999999 9
Q ss_pred CEEEEeCCCCEEEEEcCCCcEEEe-cCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCC-------------
Q 013321 93 NIYIADTMNMAIRKISDTGVTTIA-GGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN------------- 158 (445)
Q Consensus 93 ~LYVAD~~N~rIrkfd~dGv~tia-Gg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn------------- 158 (445)
+|||++..+ +|.++|.+|..... ... .....+..|.+|+ ++++|.|||++.++
T Consensus 84 ~l~v~~~~~-~l~~~d~~g~~~~~~~~~-----------~~~~~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~~~~~~ 150 (314)
T 1pjx_A 84 QLFVADMRL-GLLVVQTDGTFEEIAKKD-----------SEGRRMQGCNDCA-FDYEGNLWITAPAGEVAPADYTRSMQE 150 (314)
T ss_dssp EEEEEETTT-EEEEEETTSCEEECCSBC-----------TTSCBCBCCCEEE-ECTTSCEEEEECBCBCTTSCCCBTTSS
T ss_pred cEEEEECCC-CEEEEeCCCCEEEEEecc-----------CCCccccCCcCEE-ECCCCCEEEEecCcccccccccccccC
Confidence 999999854 89999977743321 110 0012345788886 68899999999865
Q ss_pred --CeEEEEECCCCceeecCCCCccceEEEE
Q 013321 159 --QAIREIQLHDDDCSDNYDDTFHLGIFVL 186 (445)
Q Consensus 159 --~rIr~i~l~~~~~~~~~~~g~P~gIav~ 186 (445)
+.|++++.++...........|.++++.
T Consensus 151 ~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~ 180 (314)
T 1pjx_A 151 KFGSIYCFTTDGQMIQVDTAFQFPNGIAVR 180 (314)
T ss_dssp SCEEEEEECTTSCEEEEEEEESSEEEEEEE
T ss_pred CCCeEEEECCCCCEEEeccCCCCcceEEEe
Confidence 6899998774332222223446666655
No 51
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.81 E-value=7.7e-08 Score=96.22 Aligned_cols=133 Identities=13% Similarity=0.167 Sum_probs=82.6
Q ss_pred CCceEEEEcCC----CcEEEEeCCC-----CeEEEEeCCCCCCCccEEEe-cCCCCcccCCCCCccCccCCCcceEEEcC
Q 013321 21 MEPFSVAVSPS----GELLVLDSEN-----SNIYKISTSLSPYSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD 90 (445)
Q Consensus 21 ~~P~gIAVdpd----G~LYVaDs~n-----~rI~kid~dg~~~G~v~~va-G~~~G~~G~~dG~~~~a~Ln~P~GIavD~ 90 (445)
..|.||+++++ |.|||+++.+ ++|.+++.++........+. +.+. .......|.+|++++
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~----------~~~~~h~~~~l~~~p 144 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPA----------RPHGLHSGGRIAFGP 144 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECC----------CTTCCCCCCCEEECT
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCC----------CCCCCcCCceEEECC
Confidence 57999999997 7899999865 79999987642111222222 2210 001356789999999
Q ss_pred CCCEEEEeCC-------------CCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECC-CCeEEEEEC
Q 013321 91 RGNIYIADTM-------------NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDR 156 (445)
Q Consensus 91 dG~LYVAD~~-------------N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~-dG~LyVaD~ 156 (445)
+|.|||++.. +++|.+|+.+|... ..+......+. ....-...+..|++|+ .++ +|.|||+|.
T Consensus 145 dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p-~~npf~~~~~~-~~~i~a~G~rnp~g~a-~d~~~g~l~v~d~ 221 (352)
T 2ism_A 145 DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA-PGNPFLGRRGA-RPEVYSLGHRNPQGLA-WHPKTGELFSSEH 221 (352)
T ss_dssp TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC-TTCTTTTCTTS-CTTEEEECCSEECCCE-ECTTTCCEEEEEE
T ss_pred CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC-CCCcccCCCCC-CccEEEEcCCCcccEE-EECCCCCEEEEEc
Confidence 9999999742 36899999887210 11100000000 0000112357899997 466 899999999
Q ss_pred CCCe--------EEEEEC
Q 013321 157 GNQA--------IREIQL 166 (445)
Q Consensus 157 gn~r--------Ir~i~l 166 (445)
+.++ |.++..
T Consensus 222 g~~~~~~~~~dei~~i~~ 239 (352)
T 2ism_A 222 GPSGEQGYGHDEVNLIVP 239 (352)
T ss_dssp CC------CCCEEEEECT
T ss_pred CCCCCCCCCCeEEEEecc
Confidence 8877 666654
No 52
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.80 E-value=1e-07 Score=93.72 Aligned_cols=132 Identities=14% Similarity=0.094 Sum_probs=89.8
Q ss_pred EEEEecCCCCCCCceEEEEcCCCcEEEEeCC--C--CeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcce
Q 013321 10 VETVFEGSKFGMEPFSVAVSPSGELLVLDSE--N--SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 85 (445)
Q Consensus 10 v~tv~~Gs~~g~~P~gIAVdpdG~LYVaDs~--n--~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~G 85 (445)
++.+.... ..|.+|+++++|+|||+... + .+|.+++ + |++..+.... ......|..|.+
T Consensus 9 ~~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~----g~~~~~p~~~---------~~~~~~~~~p~g 71 (343)
T 2qe8_A 9 LEVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-Q----DGLIPFPPQS---------GNAIITFDTVLG 71 (343)
T ss_dssp CEEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-T----TEEEESCCCC---------SSCCCCCSCEEE
T ss_pred eEEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-C----CCeecCCCcc---------cCcccceeEeeE
Confidence 44454433 57999999999999999752 2 3889888 4 4433221110 001135889999
Q ss_pred EEEcCCCCEEEEeCC-----CCEEEEEcCC-Cc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEEC-
Q 013321 86 LAVDDRGNIYIADTM-----NMAIRKISDT-GV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR- 156 (445)
Q Consensus 86 IavD~dG~LYVAD~~-----N~rIrkfd~d-Gv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~- 156 (445)
|++|++|+|||+|.+ ..+|.++|.. |. .++..... .......|.+|++...++.+||+|.
T Consensus 72 v~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~-----------~~~~~~~~~~v~vd~~~g~~yvtd~~ 140 (343)
T 2qe8_A 72 IKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP-----------ITLSNSFVNDLAVDLIHNFVYISDPA 140 (343)
T ss_dssp EEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT-----------TSCTTCCCCEEEEETTTTEEEEEECC
T ss_pred EEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh-----------hcccccccceEEEecCCCEEEEEcCc
Confidence 999999999999987 5899999964 52 33322110 0112346789875435689999999
Q ss_pred --CCCeEEEEECCCC
Q 013321 157 --GNQAIREIQLHDD 169 (445)
Q Consensus 157 --gn~rIr~i~l~~~ 169 (445)
.++.|.++++...
T Consensus 141 ~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 141 PDDKAALIRVDLQTG 155 (343)
T ss_dssp SGGGCEEEEEETTTC
T ss_pred cCCCCeEEEEECCCC
Confidence 8899999998754
No 53
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.80 E-value=5.1e-08 Score=93.57 Aligned_cols=134 Identities=11% Similarity=0.052 Sum_probs=94.0
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC-
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT- 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~- 99 (445)
..|.+|+++++|+|||+. ++.|.+++.++ +++..++....+ ..++.|++|++|++|+|||++.
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~---g~~~~~~~~~~~-----------~~~~~~~di~~d~dG~l~~~~~~ 117 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKE---QSAVVLATVDND-----------KKNNRFNDGKVDPAGRYFAGTMA 117 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTT---TEEEEEEECCTT-----------CSSEEEEEEEECTTSCEEEEEEE
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCC---CcEEEEEecCCC-----------CCCCCCCCEEECCCCCEEEecCC
Confidence 468999999999999997 57999999873 566665543211 1356789999999999999984
Q ss_pred ----------CCCEEEEEcCCCc-EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECC
Q 013321 100 ----------MNMAIRKISDTGV-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 100 ----------~N~rIrkfd~dGv-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~ 167 (445)
...+|.+++.+|. ..+.. .+..|++++ .++++ .|||+|+.+++|++++.+
T Consensus 118 ~~~~~~~~~~~~~~l~~~d~~g~~~~~~~-----------------~~~~pngi~-~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 118 EETAPAVLERHQGALYSLFPDHHVKKYFD-----------------QVDISNGLD-WSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp CCSBTTBCCTTCEEEEEECTTSCEEEEEE-----------------EESBEEEEE-ECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred cccccccccCCCcEEEEEECCCCEEEEee-----------------ccccccceE-EcCCCCEEEEecCCCCcEEEEecc
Confidence 3458999998773 33211 234678887 46666 699999999999999864
Q ss_pred C--Ccee----e---cCCCCccceEEEEec
Q 013321 168 D--DDCS----D---NYDDTFHLGIFVLVA 188 (445)
Q Consensus 168 ~--~~~~----~---~~~~g~P~gIav~~~ 188 (445)
. .... . ....+.|.+++++..
T Consensus 180 ~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 180 LQTGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp TTTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred CCCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 2 1111 1 112356777777654
No 54
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.77 E-value=1.5e-07 Score=92.35 Aligned_cols=157 Identities=16% Similarity=0.106 Sum_probs=97.4
Q ss_pred CCCceEEEEcCCCcEEEEeCC-----CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCC
Q 013321 20 GMEPFSVAVSPSGELLVLDSE-----NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGN 93 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs~-----n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~ 93 (445)
...|++|++|++|+|||+|.+ .++|+++++.+ |++......+... + .....|.+|++|+ +|.
T Consensus 66 ~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t---g~~~~~~~~~~~~-~--------~~~~~~~~v~vd~~~g~ 133 (343)
T 2qe8_A 66 FDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN---NQLSRVIYLPPPI-T--------LSNSFVNDLAVDLIHNF 133 (343)
T ss_dssp CSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT---TEEEEEEECCTTT-S--------CTTCCCCEEEEETTTTE
T ss_pred eeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC---CeEEEEEECChhh-c--------ccccccceEEEecCCCE
Confidence 378999999999999999987 58999999863 5543333221100 0 1235789999996 578
Q ss_pred EEEEeC---CCCEEEEEcCC-C-cEEEecCcccCCC--C--CCCCC-----ccCc----ccCCCceEEEECCCC-eEEEE
Q 013321 94 IYIADT---MNMAIRKISDT-G-VTTIAGGKWSRGV--G--HVDGP-----SEDA----KFSNDFDVVYVGSSC-SLLVI 154 (445)
Q Consensus 94 LYVAD~---~N~rIrkfd~d-G-v~tiaGg~~G~g~--G--~~dgp-----~~~a----~f~~P~gI~~vd~dG-~LyVa 154 (445)
+||+|. .++.|.++|.. | ...+..+...... + ..++. .... ....|++|+ ++++| .||++
T Consensus 134 ~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia-~s~dg~~ly~~ 212 (343)
T 2qe8_A 134 VYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV-LDAENEWLYLS 212 (343)
T ss_dssp EEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE-ECTTSCEEEEE
T ss_pred EEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE-eccCCCEEEEE
Confidence 999999 88999999964 4 3333222100000 0 00110 0000 013578887 56677 69999
Q ss_pred ECCCCeEEEEECCC----Cc--------eeecCCCCccceEEEEecc
Q 013321 155 DRGNQAIREIQLHD----DD--------CSDNYDDTFHLGIFVLVAA 189 (445)
Q Consensus 155 D~gn~rIr~i~l~~----~~--------~~~~~~~g~P~gIav~~~a 189 (445)
+..+++|++++... .. .......+.|.|++++..+
T Consensus 213 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G 259 (343)
T 2qe8_A 213 PMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH 259 (343)
T ss_dssp ESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC
T ss_pred eCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCC
Confidence 99999999998531 10 0111223468888887543
No 55
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.77 E-value=9.9e-08 Score=93.32 Aligned_cols=134 Identities=9% Similarity=0.148 Sum_probs=91.1
Q ss_pred CCCceEEEEcCCCcEEEEeCCC----------CeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEc
Q 013321 20 GMEPFSVAVSPSGELLVLDSEN----------SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD 89 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs~n----------~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD 89 (445)
+..|.+|+++++|++||++.++ +.|.+++..+ +++......+. -..|.+|+++
T Consensus 171 g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t---~~v~~~~~~~~--------------g~~p~~la~~ 233 (328)
T 3dsm_A 171 GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET---FTVEKQFKFKL--------------GDWPSEVQLN 233 (328)
T ss_dssp SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT---TEEEEEEECCT--------------TCCCEEEEEC
T ss_pred CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC---CeEEEEEecCC--------------CCCceeEEEe
Confidence 4579999999999999999876 8999999863 44443222210 1379999999
Q ss_pred CCCC-EEEEeCCCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECC-CCeEEEEE----CCCCeEEE
Q 013321 90 DRGN-IYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVID----RGNQAIRE 163 (445)
Q Consensus 90 ~dG~-LYVAD~~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~-dG~LyVaD----~gn~rIr~ 163 (445)
++|. |||++. .|.++|...-..... . ... .....|.+|+ +++ ++.|||++ ..+++|.+
T Consensus 234 ~d~~~lyv~~~---~v~~~d~~t~~~~~~-~------~~~-----~~~~~p~gi~-vdp~~g~lyva~~~~y~~~~~V~v 297 (328)
T 3dsm_A 234 GTRDTLYWINN---DIWRMPVEADRVPVR-P------FLE-----FRDTKYYGLT-VNPNNGEVYVADAIDYQQQGIVYR 297 (328)
T ss_dssp TTSCEEEEESS---SEEEEETTCSSCCSS-C------SBC-----CCSSCEEEEE-ECTTTCCEEEEECTTSSSEEEEEE
T ss_pred cCCCEEEEEcc---EEEEEECCCCceeee-e------eec-----CCCCceEEEE-EcCCCCeEEEEcccccccCCEEEE
Confidence 8665 999986 799999654211100 0 000 0145789987 565 89999999 88999999
Q ss_pred EECCCCceeecCCCCccceEEEE
Q 013321 164 IQLHDDDCSDNYDDTFHLGIFVL 186 (445)
Q Consensus 164 i~l~~~~~~~~~~~g~P~gIav~ 186 (445)
|++++.......-...|.+++.-
T Consensus 298 ~d~~g~~~~~i~~G~~P~~~~~~ 320 (328)
T 3dsm_A 298 YSPQGKLIDEFYVGIIPGAFCWK 320 (328)
T ss_dssp ECTTCCEEEEEEEEESEEEEEEE
T ss_pred ECCCCCEEEEEEeccCcceEEEe
Confidence 99886544443333345555543
No 56
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.75 E-value=8.6e-08 Score=90.45 Aligned_cols=113 Identities=17% Similarity=0.167 Sum_probs=84.2
Q ss_pred CCceEEEEcCCCcEEEEeCCC---------------CeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcce
Q 013321 21 MEPFSVAVSPSGELLVLDSEN---------------SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 85 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n---------------~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~G 85 (445)
..|.+|+++++|+|||++..+ +.|++++.+ +++..+.. .+..|.+
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----g~~~~~~~----------------~~~~~~~ 176 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD----GQMIQVDT----------------AFQFPNG 176 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT----SCEEEEEE----------------EESSEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC----CCEEEecc----------------CCCCcce
Confidence 469999999999999999865 689999876 44444322 1457899
Q ss_pred EEEc----CCC-CEEEEeCCCCEEEEEcC--CCcE----EEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEE
Q 013321 86 LAVD----DRG-NIYIADTMNMAIRKISD--TGVT----TIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVI 154 (445)
Q Consensus 86 IavD----~dG-~LYVAD~~N~rIrkfd~--dGv~----tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVa 154 (445)
|+++ ++| .|||+|..+++|.+++. +|.. .+.... ...+..|.+|+ ++++|.|||+
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-------------~~~~~~p~~i~-~d~~G~l~v~ 242 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-------------GTHEGGADGMD-FDEDNNLLVA 242 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-------------CCSSCEEEEEE-EBTTCCEEEE
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC-------------CCCCCCCCceE-ECCCCCEEEE
Confidence 9999 999 59999999999999984 3421 111100 00113577775 7899999999
Q ss_pred ECCCCeEEEEECC
Q 013321 155 DRGNQAIREIQLH 167 (445)
Q Consensus 155 D~gn~rIr~i~l~ 167 (445)
+..+++|.++++.
T Consensus 243 ~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 243 NWGSSHIEVFGPD 255 (314)
T ss_dssp EETTTEEEEECTT
T ss_pred EcCCCEEEEEcCC
Confidence 9989999999987
No 57
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.73 E-value=4.3e-07 Score=88.76 Aligned_cols=135 Identities=11% Similarity=0.051 Sum_probs=95.0
Q ss_pred CCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 20 GMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
+..|.+|+++++|.|||++..++.|.+++..+ +++......+. ...++..|.+|++ .++.|||++.
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t---~~~~~~i~~g~----------~~~~~~~p~~i~~-~~~~lyv~~~ 148 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT---YEITGYIECPD----------MDMESGSTEQMVQ-YGKYVYVNCW 148 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTT---TEEEEEEECTT----------CCTTTCBCCCEEE-ETTEEEEEEC
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCC---CeEEEEEEcCC----------ccccCCCcceEEE-ECCEEEEEcC
Confidence 46799999988899999998789999999873 44432222110 0124568999999 5788999998
Q ss_pred C-CCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCC----------CeEEEEE
Q 013321 100 M-NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN----------QAIREIQ 165 (445)
Q Consensus 100 ~-N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn----------~rIr~i~ 165 (445)
+ .+.|.+||... +.++..+ ..|.+++ ++++|.+||++.++ +.|.+|+
T Consensus 149 ~~~~~v~viD~~t~~~~~~i~~g------------------~~p~~i~-~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 149 SYQNRILKIDTETDKVVDELTIG------------------IQPTSLV-MDKYNKMWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp TTCCEEEEEETTTTEEEEEEECS------------------SCBCCCE-ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEEEcC------------------CCccceE-EcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence 4 88999999654 2232111 2466775 68899999999876 8999999
Q ss_pred CCCCceee-c--CCCCccceEEEEe
Q 013321 166 LHDDDCSD-N--YDDTFHLGIFVLV 187 (445)
Q Consensus 166 l~~~~~~~-~--~~~g~P~gIav~~ 187 (445)
+....... . .....|.++++..
T Consensus 210 ~~t~~v~~~~~~~~g~~p~~la~~~ 234 (328)
T 3dsm_A 210 AETFTVEKQFKFKLGDWPSEVQLNG 234 (328)
T ss_dssp TTTTEEEEEEECCTTCCCEEEEECT
T ss_pred CCCCeEEEEEecCCCCCceeEEEec
Confidence 87654332 1 1123677777764
No 58
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.72 E-value=1.8e-07 Score=89.55 Aligned_cols=122 Identities=11% Similarity=0.140 Sum_probs=86.0
Q ss_pred CCCceEEEEcCCCcEEEEeCC------CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC
Q 013321 20 GMEPFSVAVSPSGELLVLDSE------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 93 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs~------n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~ 93 (445)
+..|.+|+++++|+|||++.. ++.|++++.++ +++..+.. .+..|.+|+++++|.
T Consensus 134 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~----------------~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 134 AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF---RTVTPIIQ----------------NISVANGIALSTDEK 194 (333)
T ss_dssp CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS---CCEEEEEE----------------EESSEEEEEECTTSS
T ss_pred CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC---CEEEEeec----------------CCCcccceEECCCCC
Confidence 357999999999999999875 47899998763 33433321 144689999999997
Q ss_pred -EEEEeCCCCEEEEEcC--CC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 94 -IYIADTMNMAIRKISD--TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 94 -LYVAD~~N~rIrkfd~--dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
|||+|..+++|.+++. +| .......... . . ......|.+|+ ++++|.|||++.++++|+++++++.
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~--~---~----~~~~~~~~~i~-~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIP--Y---Y----FTGHEGPDSCC-IDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEE--E---E----CCSSSEEEEEE-EBTTCCEEEEEETTTEEEEECTTSC
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEE--E---e----cCCCCCCCceE-ECCCCCEEEEEcCCCEEEEECCCCC
Confidence 9999998899999985 44 2211100000 0 0 00013567775 7899999999998999999998664
Q ss_pred c
Q 013321 170 D 170 (445)
Q Consensus 170 ~ 170 (445)
.
T Consensus 265 ~ 265 (333)
T 2dg1_A 265 P 265 (333)
T ss_dssp E
T ss_pred E
Confidence 4
No 59
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.71 E-value=7.1e-07 Score=85.40 Aligned_cols=117 Identities=16% Similarity=0.177 Sum_probs=86.6
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
..|.+++++++|+||+++..++.|++++.++ +++..+.... -..|.+|+++++|+|||++..
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~---~~~~~~~~~~---------------~~~~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVFEGNIFKINPET---KEIKRPFVSH---------------KANPAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp CCEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECS---------------SSSEEEEEECTTSCEEEEECT
T ss_pred ccccCcEECCCCCEEEEECCCCEEEEEeCCC---CcEEEEeeCC---------------CCCcceEEECCCCcEEEEeCC
Confidence 4689999999999999999999999999874 4444433110 236899999999999999987
Q ss_pred C----CEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECC------CCeEEEEECCC
Q 013321 101 N----MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG------NQAIREIQLHD 168 (445)
Q Consensus 101 N----~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~g------n~rIr~i~l~~ 168 (445)
+ +.|.++|.++ ...+.... .....|.+++ ++++|.|||++.. +..|++++..+
T Consensus 107 ~~~~~~~i~~~d~~~~~~~~~~~~~--------------~~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 107 DFKSTGGIFAATENGDNLQDIIEDL--------------STAYCIDDMV-FDSKGGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp TSSSCCEEEEECTTSCSCEEEECSS--------------SSCCCEEEEE-ECTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCCCCceEEEEeCCCCEEEEEEccC--------------ccCCcccceE-ECCCCCEEEEeccccccCCCceEEEEeCCC
Confidence 6 7999999766 22121100 0123577876 6889999999875 57899998765
Q ss_pred Cc
Q 013321 169 DD 170 (445)
Q Consensus 169 ~~ 170 (445)
..
T Consensus 172 ~~ 173 (333)
T 2dg1_A 172 RT 173 (333)
T ss_dssp CC
T ss_pred CE
Confidence 43
No 60
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.71 E-value=1.5e-07 Score=94.32 Aligned_cols=139 Identities=10% Similarity=0.071 Sum_probs=90.9
Q ss_pred eecCCcEEEEEecCCCCCCCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccC
Q 013321 3 KFEGGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARM 80 (445)
Q Consensus 3 ~~e~G~~v~tv~~Gs~~g~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~L 80 (445)
..++|+.++.++.+ ...|.+|+++++|+ |||++. .++|++++.++ ... .+++.+.- .....
T Consensus 3 ~~p~g~~~~~va~~---l~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~g----~~~~~~~~~~~v---------~~~g~ 65 (353)
T 2g8s_A 3 MAPATVNVEVLQDK---LDHPWALAFLPDNHGMLITLR-GGELRHWQAGK----GLSAPLSGVPDV---------WAHGQ 65 (353)
T ss_dssp ---CCSEEEEEEEE---ESSEEEEEECSTTCCEEEEET-TTEEEEEETTT----EECCCCBSCCCC---------CCSTT
T ss_pred CCCCCcEEEEEECC---CCCcEEEEEcCCCCEEEEEeC-CceEEEEeCCC----ceeeEecCCccc---------ccCCC
Confidence 45789999999873 35799999999999 999997 58999998763 221 22222100 00113
Q ss_pred CCcceEEEcC----CCCEEEEeCC-------CCEEEEEcCCC-------cEEEecCcccCCCCCCCCCccCcccCCCceE
Q 013321 81 NHPKGLAVDD----RGNIYIADTM-------NMAIRKISDTG-------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDV 142 (445)
Q Consensus 81 n~P~GIavD~----dG~LYVAD~~-------N~rIrkfd~dG-------v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI 142 (445)
..|.||++++ +|.|||+++. .++|.+++.++ ..++.-+ .+........+.+|
T Consensus 66 ~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~----------~p~~~~~~h~~~~l 135 (353)
T 2g8s_A 66 GGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQ----------MPKLSTGNHFGGRL 135 (353)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEEC----------SSCCBSSSCCCCCE
T ss_pred CCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEE----------CCCCCCCcccCccE
Confidence 4678999998 5889999875 46899887432 1111110 01111223456777
Q ss_pred EEECCCCeEEEEECC-------------CCeEEEEECCCC
Q 013321 143 VYVGSSCSLLVIDRG-------------NQAIREIQLHDD 169 (445)
Q Consensus 143 ~~vd~dG~LyVaD~g-------------n~rIr~i~l~~~ 169 (445)
+ .+++|.|||+... .++|.+|++++.
T Consensus 136 ~-~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 136 V-FDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp E-ECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred E-ECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 6 6899999999633 368999998864
No 61
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.70 E-value=4.2e-07 Score=91.67 Aligned_cols=137 Identities=17% Similarity=0.145 Sum_probs=88.6
Q ss_pred CCceEEEE---cCCCcEEE-EeC------------CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcc
Q 013321 21 MEPFSVAV---SPSGELLV-LDS------------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPK 84 (445)
Q Consensus 21 ~~P~gIAV---dpdG~LYV-aDs------------~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~ 84 (445)
..|.||.+ |++|.||| +|. +.+.|.+++++++..++....+.-..-..+.. ......+..|+
T Consensus 63 ~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~--~~~g~~~~~~n 140 (334)
T 2p9w_A 63 QQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFE--KKAGKRPFGVV 140 (334)
T ss_dssp EEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHH--HHHSSCCEEEE
T ss_pred ceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccc--ccccccccCCc
Confidence 46899999 78999998 562 35789999987433344444443210000000 00000234689
Q ss_pred eEEEcCCCCEEEEeCCC-CEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEE
Q 013321 85 GLAVDDRGNIYIADTMN-MAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIRE 163 (445)
Q Consensus 85 GIavD~dG~LYVAD~~N-~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~ 163 (445)
+|++|++|++||+|+.. ..|.|++++|....++... .+ .......+++|++.+....|+|++. +++|.+
T Consensus 141 DvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~--------~~-~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~ 210 (334)
T 2p9w_A 141 QSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWE--------SG-NGGQRPGYSGITFDPHSNKLIAFGG-PRALTA 210 (334)
T ss_dssp EEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEEC--------CC-CSSSCCSCSEEEEETTTTEEEEESS-SSSEEE
T ss_pred eeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeec--------CC-CcccccCcceEEEeCCCCEEEEEcC-CCeEEE
Confidence 99999999999999999 9999999999533322110 00 1122456889986544447788887 999999
Q ss_pred EECCCC
Q 013321 164 IQLHDD 169 (445)
Q Consensus 164 i~l~~~ 169 (445)
|++...
T Consensus 211 fD~~~p 216 (334)
T 2p9w_A 211 FDVSKP 216 (334)
T ss_dssp EECSSS
T ss_pred EcCCCC
Confidence 998753
No 62
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.65 E-value=4.2e-07 Score=91.24 Aligned_cols=126 Identities=16% Similarity=0.191 Sum_probs=81.8
Q ss_pred CCceEEEEcCC----CcEEEEeCC---C----CeEEEEeCCCCC--CCccEEE-ecCCCCcccCCCCCccCccCCCcceE
Q 013321 21 MEPFSVAVSPS----GELLVLDSE---N----SNIYKISTSLSP--YSRPKLV-AGSPEGYYGHVDGRPRGARMNHPKGL 86 (445)
Q Consensus 21 ~~P~gIAVdpd----G~LYVaDs~---n----~rI~kid~dg~~--~G~v~~v-aG~~~G~~G~~dG~~~~a~Ln~P~GI 86 (445)
..|.||+++|+ |.|||+++. + ++|.+++.++.. .....++ .+.+ ......|.+|
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~------------~~~~h~~~~l 140 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP------------GAYIHNGGRI 140 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE------------CCSSCCCCCE
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC------------CCCCcCCceE
Confidence 56999999996 899999974 3 799999876421 1112222 2211 0125578999
Q ss_pred EEcCCCCEEEEeCC-------------CCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECC-CCeEE
Q 013321 87 AVDDRGNIYIADTM-------------NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLL 152 (445)
Q Consensus 87 avD~dG~LYVAD~~-------------N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~-dG~Ly 152 (445)
+++++|.|||++.. +++|.+|+.+|... ..+. ......-...+..|++|+ +++ +|.||
T Consensus 141 ~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p-~~np------f~~~~i~a~G~rnp~Gla-~d~~~g~l~ 212 (354)
T 3a9g_A 141 RFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP-ADNP------FPNSPIWSYGHRNPQGID-WHRASGVMV 212 (354)
T ss_dssp EECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC-TTSS------STTCCEEEECCSCCCEEE-ECTTTCCEE
T ss_pred EECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC-CCCC------CCCCcEEEEccCCcceEE-EeCCCCCEE
Confidence 99999999999642 36899999887310 0000 000000112367899997 566 89999
Q ss_pred EEECCCCe---EEEEEC
Q 013321 153 VIDRGNQA---IREIQL 166 (445)
Q Consensus 153 VaD~gn~r---Ir~i~l 166 (445)
|+|.+.++ |..+..
T Consensus 213 v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 213 ATEHGPVGHDEVNIILK 229 (354)
T ss_dssp EEECCSSSCCEEEEECT
T ss_pred EEecCCCCCcEEEEecC
Confidence 99998765 666653
No 63
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.64 E-value=7.9e-07 Score=92.56 Aligned_cols=126 Identities=17% Similarity=0.249 Sum_probs=84.3
Q ss_pred ecCCcEEEEEecCCCCCCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCc
Q 013321 4 FEGGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHP 83 (445)
Q Consensus 4 ~e~G~~v~tv~~Gs~~g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P 83 (445)
.+.|+.++.++.+ ...|.+|+++++|+|||++...++|++++... |....+...+..... ......+
T Consensus 13 ~~~gf~~~~~a~~---l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~---g~~~~~~~~~~~~~~-------~~g~~Gl 79 (454)
T 1cru_A 13 KSENFDKKVILSN---LNKPHALLWGPDNQIWLTERATGKILRVNPES---GSVKTVFQVPEIVND-------ADGQNGL 79 (454)
T ss_dssp CCTTSCEEEEECC---CSSEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCCCC-------TTSSCSE
T ss_pred CCCCeEEEEEECC---CCCceEEEEcCCCcEEEEEcCCCEEEEEECCC---CcEeEEecCCccccc-------cCCCCce
Confidence 4578899999874 35799999999999999998878999998642 555555543321100 0013357
Q ss_pred ceEEEcC----CCCEEEEeCC------------CCEEEEEcCC---C----cEEEecCcccCCCCCCCCCccCcccCCCc
Q 013321 84 KGLAVDD----RGNIYIADTM------------NMAIRKISDT---G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDF 140 (445)
Q Consensus 84 ~GIavD~----dG~LYVAD~~------------N~rIrkfd~d---G----v~tiaGg~~G~g~G~~dgp~~~a~f~~P~ 140 (445)
.|||+++ +|.|||+++. ..+|.+++.+ + ..++.-+. +. .....+.
T Consensus 80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~----------p~--~~~H~~~ 147 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGL----------PS--SKDHQSG 147 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEE----------CC--CSSCCEE
T ss_pred eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcC----------CC--CCCCCCC
Confidence 7999998 7889999964 4689998732 1 11221100 00 1123567
Q ss_pred eEEEECCCCeEEEEE
Q 013321 141 DVVYVGSSCSLLVID 155 (445)
Q Consensus 141 gI~~vd~dG~LyVaD 155 (445)
+|+ .+++|.|||+-
T Consensus 148 ~l~-f~pDG~Lyv~~ 161 (454)
T 1cru_A 148 RLV-IGPDQKIYYTI 161 (454)
T ss_dssp EEE-ECTTSCEEEEE
T ss_pred eEe-ECCCCeEEEEE
Confidence 776 68999999984
No 64
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.57 E-value=6e-07 Score=91.15 Aligned_cols=134 Identities=13% Similarity=0.097 Sum_probs=93.3
Q ss_pred CCceEEEEcC--CC--cEEEEeCC--CCe--EEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCC
Q 013321 21 MEPFSVAVSP--SG--ELLVLDSE--NSN--IYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG 92 (445)
Q Consensus 21 ~~P~gIAVdp--dG--~LYVaDs~--n~r--I~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG 92 (445)
..|+||.+.. +| .|||++.. +++ |++++.+ +.....+.... + ..|+.|++++++++|
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~----~~~~~~~~~~~-------g----~~~~~pND~~v~~~G 176 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEE----EKSLLHLKTIR-------H----KLLPSVNDIVAVGPE 176 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETT----TTEEEEEEEEC-------C----TTCSSEEEEEEEETT
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECC----CCEEEEEeccc-------c----CCCCCCceEEEeCCC
Confidence 5899999965 45 59999986 455 5556665 23333332211 1 258999999999999
Q ss_pred CEEEEeC-----------------CCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEE
Q 013321 93 NIYIADT-----------------MNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVI 154 (445)
Q Consensus 93 ~LYVAD~-----------------~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVa 154 (445)
.+||++. ..++|.+++.+.+..++. .+..|++|++ ++++ .|||+
T Consensus 177 ~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~-----------------~l~~pNGia~-spDg~~lYva 238 (355)
T 3sre_A 177 HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE-----------------GFDFANGINI-SPDGKYVYIA 238 (355)
T ss_dssp EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEE-----------------EESSEEEEEE-CTTSSEEEEE
T ss_pred CEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeec-----------------CCcccCcceE-CCCCCEEEEE
Confidence 9999875 246788888754444322 3568999975 6665 89999
Q ss_pred ECCCCeEEEEECCCCcee----ecCCCCccceEEEEe
Q 013321 155 DRGNQAIREIQLHDDDCS----DNYDDTFHLGIFVLV 187 (445)
Q Consensus 155 D~gn~rIr~i~l~~~~~~----~~~~~g~P~gIav~~ 187 (445)
|+..++|++++.+..... .....+.|.|++++.
T Consensus 239 dt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~ 275 (355)
T 3sre_A 239 ELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDP 275 (355)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECT
T ss_pred eCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeC
Confidence 999999999998643211 122357899999986
No 65
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.55 E-value=2.1e-06 Score=86.89 Aligned_cols=154 Identities=18% Similarity=0.161 Sum_probs=99.2
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcce
Q 013321 6 GGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG 85 (445)
Q Consensus 6 ~G~~v~tv~~Gs~~g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~G 85 (445)
+...+++++++- ..|.+|++.|+|.|||++...++|++++.++ |....+.+.+.-. ......|.|
T Consensus 20 ~~~~~~~va~gL---~~P~~ia~~pdG~llVter~~G~I~~v~~~~---g~~~~v~~~~~v~---------~~g~~GllG 84 (347)
T 3das_A 20 SVKVLRTVATGL---NSPWGLAPLPGGDLLVSSRDEATITRVDAKT---GRKTELGEVPGVS---------PSGEGGLLG 84 (347)
T ss_dssp CEEEEEEEECCC---SSEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCC---------CBTTBSEEE
T ss_pred CCceeEEeecCC---CCceEEEEcCCCcEEEEEecCCEEEEEECCC---CcEeeecccCcee---------ecCCCCcee
Confidence 345677777643 4699999999999999998889999998753 4455454432110 112457899
Q ss_pred EEEcC----CCCEEEEeC--CCCEEEEEcCCC----------cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC
Q 013321 86 LAVDD----RGNIYIADT--MNMAIRKISDTG----------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC 149 (445)
Q Consensus 86 IavD~----dG~LYVAD~--~N~rIrkfd~dG----------v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG 149 (445)
||+++ +|.|||+.+ ..++|.++..++ ..++.-+. +. ...-....|+ .+++|
T Consensus 85 ia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~----------p~--~~~H~g~~l~-fgpDG 151 (347)
T 3das_A 85 IALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGI----------PK--GVIHNGGRIA-FGPDK 151 (347)
T ss_dssp EEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEE----------CC--CSSCCCCCEE-ECTTS
T ss_pred eEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcC----------CC--CCCccCcccc-CCCCC
Confidence 99998 488999764 457899986432 11211100 00 1122455665 68999
Q ss_pred eEEEEEC-------------CCCeEEEEECCCCc---------eeecCCCCccceEEEEe
Q 013321 150 SLLVIDR-------------GNQAIREIQLHDDD---------CSDNYDDTFHLGIFVLV 187 (445)
Q Consensus 150 ~LyVaD~-------------gn~rIr~i~l~~~~---------~~~~~~~g~P~gIav~~ 187 (445)
.|||+-. ..++|++|++++.. ..+..+.-.|.|+++..
T Consensus 152 ~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp 211 (347)
T 3das_A 152 MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDD 211 (347)
T ss_dssp CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECT
T ss_pred CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECC
Confidence 9999942 36899999988741 12233344566776654
No 66
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.54 E-value=3.5e-06 Score=81.15 Aligned_cols=119 Identities=14% Similarity=0.126 Sum_probs=84.8
Q ss_pred CceEEEEcCCCcEEEEeCC-CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSE-NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~-n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
..+++.+.++|+++|++.. +++|+.++++ |+...-.+...+. ...+..|.+++++++|+++|++..
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~----Gk~l~~~~~~~~~---------~~~~~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNMK----GEVLSKTEFETGI---------ERPHAQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECTT----SCEEEEEEECCSC---------SSGGGSCSCCEECTTSCEEEEETT
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeCC----CCEEEEEeccCCC---------CcccccccCceECCCCCEEEEecC
Confidence 4567788888888888887 8888888877 4432222211011 113456889999999999999999
Q ss_pred CCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC-CCc
Q 013321 101 NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH-DDD 170 (445)
Q Consensus 101 N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~-~~~ 170 (445)
+++|..||.+|..+...... ..|+++. ...+|.++|++..+++|..|++. +..
T Consensus 145 ~~~v~~~d~~G~~~w~~~~~----------------~~~~~~~-~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 145 TSEVREIAPNGQLLNSVKLS----------------GTPFSSA-FLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp TTEEEEECTTSCEEEEEECS----------------SCCCEEE-ECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CCEEEEECCCCCEEEEEECC----------------CCcccee-EcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 99999999889544432110 2456654 57889999999999999999988 443
No 67
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.48 E-value=3e-06 Score=82.70 Aligned_cols=114 Identities=14% Similarity=0.190 Sum_probs=82.6
Q ss_pred CCceEEEEcCCCcEEEEeCC------CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-
Q 013321 21 MEPFSVAVSPSGELLVLDSE------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN- 93 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~------n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~- 93 (445)
..|.+++++++|+|||++.. .+.|++++ + |++..+.. .+..|.+|+++++|.
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~----g~~~~~~~----------------~~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K----GKVTKLFA----------------DISIPNSICFSPDGTT 192 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T----TEEEEEEE----------------EESSEEEEEECTTSCE
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C----CcEEEeeC----------------CCcccCCeEEcCCCCE
Confidence 46899999999999999853 46899998 5 44444321 134688999999996
Q ss_pred EEEEeCCCCEEEEEcC---CC-c----EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEE
Q 013321 94 IYIADTMNMAIRKISD---TG-V----TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQ 165 (445)
Q Consensus 94 LYVAD~~N~rIrkfd~---dG-v----~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~ 165 (445)
|||+|..+++|.+++. +| . ..+... . .....|.+++ +|.+|.|||++.++++|.+++
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~---------~-----~~~~~p~gi~-~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS---------T-----GIKGGMDGSV-CDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC---------T-----TSSSEEEEEE-ECTTSCEEEEEETTTEEEEEC
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEEC---------C-----CCCCCCCeeE-ECCCCCEEEEEeCCCEEEEEC
Confidence 9999999999999984 34 1 111100 0 0112466765 799999999998889999999
Q ss_pred CCCCc
Q 013321 166 LHDDD 170 (445)
Q Consensus 166 l~~~~ 170 (445)
+.+..
T Consensus 258 ~~g~~ 262 (326)
T 2ghs_A 258 TDGNH 262 (326)
T ss_dssp TTCCE
T ss_pred CCCCE
Confidence 86543
No 68
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.47 E-value=1.1e-07 Score=96.52 Aligned_cols=113 Identities=13% Similarity=0.072 Sum_probs=79.5
Q ss_pred CCCCceEEEEcCCCcEEEEeC-----------------CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCC
Q 013321 19 FGMEPFSVAVSPSGELLVLDS-----------------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMN 81 (445)
Q Consensus 19 ~g~~P~gIAVdpdG~LYVaDs-----------------~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln 81 (445)
..+.|++++++++|.+||++. ..++|+++++ ++++.++. .|.
T Consensus 163 ~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-----~~~~~~~~----------------~l~ 221 (355)
T 3sre_A 163 LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-----NDVRVVAE----------------GFD 221 (355)
T ss_dssp TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-----TCCEEEEE----------------EES
T ss_pred CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-----CeEEEeec----------------CCc
Confidence 457899999999999999874 2478889886 24454443 277
Q ss_pred CcceEEEcCCCC-EEEEeCCCCEEEEEcC--CCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECC-CCeEEEEE-C
Q 013321 82 HPKGLAVDDRGN-IYIADTMNMAIRKISD--TGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVID-R 156 (445)
Q Consensus 82 ~P~GIavD~dG~-LYVAD~~N~rIrkfd~--dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~-dG~LyVaD-~ 156 (445)
.|+|||+++||. |||||+..++|++|+- +|..... .. . + .-..|-++. +|. +|+|||+. .
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~-~~----~---~------~~g~PDGi~-vD~e~G~lwva~~~ 286 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPL-RV----L---S------FDTLVDNIS-VDPVTGDLWVGCHP 286 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE-EE----E---E------CSSEEEEEE-ECTTTCCEEEEEES
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecC-EE----E---e------CCCCCceEE-EeCCCCcEEEEecC
Confidence 899999999985 9999999999999984 3421110 00 0 0 012466775 788 59999966 4
Q ss_pred CCCeEEEEECC
Q 013321 157 GNQAIREIQLH 167 (445)
Q Consensus 157 gn~rIr~i~l~ 167 (445)
+..+|.+++++
T Consensus 287 ~g~~v~~~~P~ 297 (355)
T 3sre_A 287 NGMRIFFYDAE 297 (355)
T ss_dssp CHHHHHSCCTT
T ss_pred CceEEEEECCC
Confidence 55666666554
No 69
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.46 E-value=3.9e-06 Score=80.80 Aligned_cols=120 Identities=12% Similarity=0.018 Sum_probs=89.6
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
..|.+++++++|+++|++..+++|+.++++ |+.....+.. ..|.++++.++|+++|++..
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~----G~~~w~~~~~----------------~~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFATSEVREIAPN----GQLLNSVKLS----------------GTPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp GSCSCCEECTTSCEEEEETTTTEEEEECTT----SCEEEEEECS----------------SCCCEEEECTTSCEEEECBT
T ss_pred ccccCceECCCCCEEEEecCCCEEEEECCC----CCEEEEEECC----------------CCccceeEcCCCCEEEEeCC
Confidence 357889999999999999999999999997 4544443321 25788999999999999999
Q ss_pred CCEEEEEcCC-CcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECC----------CCeEEEEECCCC
Q 013321 101 NMAIRKISDT-GVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG----------NQAIREIQLHDD 169 (445)
Q Consensus 101 N~rIrkfd~d-Gv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~g----------n~rIr~i~l~~~ 169 (445)
+++|..||.+ |..+........ ....|..|.++. +.++|++||++.. +.++..|+.++.
T Consensus 185 ~~~v~~~d~~tG~~~w~~~~~~~---------~~~~l~~~~~~~-~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~ 254 (276)
T 3no2_A 185 AHCFVQLNLESNRIVRRVNANDI---------EGVQLFFVAQLF-PLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK 254 (276)
T ss_dssp TSEEEEECTTTCCEEEEEEGGGS---------BSCCCSEEEEEE-ECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSB
T ss_pred CCeEEEEeCcCCcEEEEecCCCC---------CCccccccccce-EcCCCCEEEEeccCccccccccCCceEEEECCCCC
Confidence 9999999987 844332221100 112467788886 6889999999962 447888887775
Q ss_pred c
Q 013321 170 D 170 (445)
Q Consensus 170 ~ 170 (445)
.
T Consensus 255 ~ 255 (276)
T 3no2_A 255 V 255 (276)
T ss_dssp E
T ss_pred E
Confidence 4
No 70
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.45 E-value=9.2e-07 Score=89.20 Aligned_cols=125 Identities=16% Similarity=0.046 Sum_probs=85.2
Q ss_pred CceEEEEcCCCcEEEEeCCC-CeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC
Q 013321 22 EPFSVAVSPSGELLVLDSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 99 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n-~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 99 (445)
.+.+|++|++|++||+|+.. +.|+|++++|. .+..+.-.. .. ......++||+++++|+ |+|+|.
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~---~~~~~~~~~-~~---------~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGK---TVSTFAWES-GN---------GGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSC---CEEEEEECC-CC---------SSSCCSCSEEEEETTTTEEEEESS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCC---EEeeeeecC-CC---------cccccCcceEEEeCCCCEEEEEcC
Confidence 48899999999999999998 99999999953 122222111 10 11245789999999997 778888
Q ss_pred CCCEEEEEcCCCcEE--EecCcccCCCCCCCCCccCcccCCCceEEEECCCCeE-EEEECCCCeEEEEECCCCc
Q 013321 100 MNMAIRKISDTGVTT--IAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSL-LVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 100 ~N~rIrkfd~dGv~t--iaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~L-yVaD~gn~rIr~i~l~~~~ 170 (445)
.++|.+||...... +.-...| ....|..|.+|+.+..+|.+ +|++..++++...+.++..
T Consensus 205 -~g~L~~fD~~~pv~~~v~~~~~G----------~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~DgW~ 267 (334)
T 2p9w_A 205 -PRALTAFDVSKPYAWPEPVKING----------DFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWK 267 (334)
T ss_dssp -SSSEEEEECSSSSCCCEECEESS----------CCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSSTTS
T ss_pred -CCeEEEEcCCCCcceeecccccC----------CcccccCcccccccccCCEEEEEEcCCCCEEEEECCCCcc
Confidence 99999999664211 1100001 01245667776445567766 9999888888888877733
No 71
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.39 E-value=4.7e-06 Score=80.11 Aligned_cols=125 Identities=20% Similarity=0.205 Sum_probs=84.5
Q ss_pred CCceEEEEcCCCcEEEEeCC--CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEE
Q 013321 21 MEPFSVAVSPSGELLVLDSE--NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 97 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~--n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 97 (445)
..|.+|+++|+|.||+++.. ++.|+.++.++ +....+.... .....|.+|+++++|. ||++
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~---g~~~~~~~~~-------------~~~~~p~~~a~spdg~~l~~~ 103 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDG---QTAHKLNTVV-------------APGTPPAYVAVDEARQLVYSA 103 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEET---TEEEEEEEEE-------------EESCCCSEEEEETTTTEEEEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecC---CcEEEeeeee-------------cCCCCCEEEEECCCCCEEEEE
Confidence 57999999999999999863 67888888753 3333332100 0134789999999998 9999
Q ss_pred eCCCCEEEEEc--CCCc-EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC
Q 013321 98 DTMNMAIRKIS--DTGV-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 98 D~~N~rIrkfd--~dGv-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~ 167 (445)
+..++.|..++ .+|. ..+.... .. + .++........|.+++ ++++|.||+++.++++|+.+++.
T Consensus 104 ~~~~~~v~v~~~~~~g~~~~~~~~~-~~--~--~~p~~~~~~~~~~~~~-~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 104 NYHKGTAEVMKIAADGALTLTDTVQ-HS--G--HGPRPEQDGSHIHYTD-LTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEE-CC--C--CCSSTTCSSCCEEEEE-ECTTSCEEEEETTTTEEEEEEEC
T ss_pred eCCCCEEEEEEeCCCCCeeecceee-cC--C--CCCCccccCCCceEEE-ECCCCcEEEEeCCCCEEEEEEEC
Confidence 98888888887 3442 2221110 00 0 0111122334577776 68888899999999999999987
No 72
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.29 E-value=1.3e-05 Score=76.95 Aligned_cols=125 Identities=15% Similarity=0.178 Sum_probs=82.7
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 99 (445)
..|++++++|+|+||+++..+++|..++.+. .|++..+.... .. .-..|.+|+++++|. |||++.
T Consensus 141 ~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~--~g~~~~~~~~~-~~-----------~g~~p~~~~~spdg~~l~v~~~ 206 (347)
T 3hfq_A 141 SHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD--AGQLSEQSVLT-ME-----------AGFGPRHLVFSPDGQYAFLAGE 206 (347)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEEEECT--TSCEEEEEEEE-CC-----------TTCCEEEEEECTTSSEEEEEET
T ss_pred CCceEEEECCCCcEEEEeCCCCEEEEEEECC--CCcEEEeeeEE-cC-----------CCCCCceEEECCCCCEEEEEeC
Confidence 3588999999999999999999998888651 14443322110 00 113588999999998 999999
Q ss_pred CCCEEEEEcCC---CcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCe-EEEEECCCCeEEEEECC
Q 013321 100 MNMAIRKISDT---GVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLH 167 (445)
Q Consensus 100 ~N~rIrkfd~d---Gv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~-LyVaD~gn~rIr~i~l~ 167 (445)
.+++|.+++.+ |........... +........|.+++ ++++|. |||++.+++.|..++++
T Consensus 207 ~~~~v~v~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~i~-~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 207 LSSQIASLKYDTQTGAFTQLGIVKTI-------PADYTAHNGAAAIR-LSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEEESS-------CTTCCSCCEEEEEE-ECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCCEEEEEEecCCCCceEEeeeeeec-------CCCCCCCCcceeEE-ECCCCCEEEEEeCCCCEEEEEEEC
Confidence 99998888733 432211100000 00011124577776 577775 88999999999999976
No 73
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.28 E-value=1.4e-05 Score=80.76 Aligned_cols=126 Identities=14% Similarity=0.209 Sum_probs=81.2
Q ss_pred CCceEEEEcC----CCcEEEEeC--CCCeEEEEeCCCC-----CCCccEEEe-cCCCCcccCCCCCccCccCCCcceEEE
Q 013321 21 MEPFSVAVSP----SGELLVLDS--ENSNIYKISTSLS-----PYSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAV 88 (445)
Q Consensus 21 ~~P~gIAVdp----dG~LYVaDs--~n~rI~kid~dg~-----~~G~v~~va-G~~~G~~G~~dG~~~~a~Ln~P~GIav 88 (445)
..|.|||++| +|.|||+.+ ..++|.|++.++. ......++. +.+. ........|++
T Consensus 80 ~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~------------~~~H~g~~l~f 147 (347)
T 3das_A 80 GGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK------------GVIHNGGRIAF 147 (347)
T ss_dssp BSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC------------CSSCCCCCEEE
T ss_pred CCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC------------CCCccCccccC
Confidence 5689999998 488999864 4679999987641 122333332 3221 02345678999
Q ss_pred cCCCCEEEEeC-------------CCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEE
Q 013321 89 DDRGNIYIADT-------------MNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVID 155 (445)
Q Consensus 89 D~dG~LYVAD~-------------~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD 155 (445)
+++|.|||+-. ..++|.||+.+|... ..+. +.+...-..-+.+|++++ .+++|.||++|
T Consensus 148 gpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip-~~nP------f~~~~i~a~G~RNp~Gla-~dp~G~L~~~d 219 (347)
T 3das_A 148 GPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA-PGNP------FPGSPVYSYGHRNVQGLA-WDDKQRLFASE 219 (347)
T ss_dssp CTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC-TTCS------STTCCEEEBCCSBCCEEE-ECTTCCEEEEE
T ss_pred CCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc-CCCC------CCCCeEEeeCCCCcceEE-ECCCCCEEEEe
Confidence 99999999932 357899999887310 0000 000011112467899997 57789999999
Q ss_pred CCC---CeEEEEEC
Q 013321 156 RGN---QAIREIQL 166 (445)
Q Consensus 156 ~gn---~rIr~i~l 166 (445)
.+. ..|.++..
T Consensus 220 ~g~~~~deln~i~~ 233 (347)
T 3das_A 220 FGQDTWDELNAIKP 233 (347)
T ss_dssp CCSSSCEEEEEECT
T ss_pred cCCCCCceeeEEcC
Confidence 876 45666653
No 74
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.26 E-value=1.6e-05 Score=77.52 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=80.0
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
..|.+|+++++|++||+. .+.|++++..+ |++..+..... + ...+.|.++++|++|+|||++..
T Consensus 90 ~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~---g~~~~~~~~~~-------~----~~~~~~~~i~~d~~G~l~v~~~~ 153 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS--DDGLFLRDTAT---GVLTLHAELES-------D----LPGNRSNDGRMHPSGALWIGTMG 153 (326)
T ss_dssp SCEEEEEEEETTEEEEEE--TTEEEEEETTT---CCEEEEECSST-------T----CTTEEEEEEEECTTSCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEE--CCCEEEEECCC---CcEEEEeeCCC-------C----CCCCCCCCEEECCCCCEEEEeCC
Confidence 368899999999999987 45699998763 55555543210 0 12456889999999999999863
Q ss_pred ------CCEEEEEcCCCc-EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECC
Q 013321 101 ------NMAIRKISDTGV-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 101 ------N~rIrkfd~dGv-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~ 167 (445)
..+|.+++ +|. ..+.. .+..|.+++ .+++| .|||+|..+++|++++.+
T Consensus 154 ~~~~~~~~~l~~~~-~g~~~~~~~-----------------~~~~~~~i~-~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 154 RKAETGAGSIYHVA-KGKVTKLFA-----------------DISIPNSIC-FSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp TTCCTTCEEEEEEE-TTEEEEEEE-----------------EESSEEEEE-ECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CcCCCCceEEEEEe-CCcEEEeeC-----------------CCcccCCeE-EcCCCCEEEEEECCCCEEEEEEcc
Confidence 46899998 663 22211 123466776 56677 699999999999999975
No 75
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.25 E-value=8.9e-06 Score=81.33 Aligned_cols=141 Identities=11% Similarity=0.114 Sum_probs=83.6
Q ss_pred CCceEEEEcCCCcEEEEeCC-------------CCeEEEEeCCCCCCCccEEEecCCCCcccC--CCCCccCccCCCcce
Q 013321 21 MEPFSVAVSPSGELLVLDSE-------------NSNIYKISTSLSPYSRPKLVAGSPEGYYGH--VDGRPRGARMNHPKG 85 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~-------------n~rI~kid~dg~~~G~v~~vaG~~~G~~G~--~dG~~~~a~Ln~P~G 85 (445)
..|.+|++++||.|||+... .++|+|++++|+.. .+++ ..+. .....-..-+.+|.|
T Consensus 130 h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p------~~np--f~~~~~~~~~i~a~G~rnp~g 201 (353)
T 2g8s_A 130 HFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP------DDNP--FIKESGVRAEIWSYGIRNPQG 201 (353)
T ss_dssp CCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC------TTCT--TTTSTTSCTTEEEECCSEEEE
T ss_pred ccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC------CCCC--CcCCCCCCccEEEEcCcCccc
Confidence 45889999999999999633 36899999985320 1111 0000 011111234789999
Q ss_pred EEEcC-CCCEEEEeCCCC---EEEEEcCCCcE---EEecCcc--cCCCC-----CCCCCc-cC---cccCCCceEEEECC
Q 013321 86 LAVDD-RGNIYIADTMNM---AIRKISDTGVT---TIAGGKW--SRGVG-----HVDGPS-ED---AKFSNDFDVVYVGS 147 (445)
Q Consensus 86 IavD~-dG~LYVAD~~N~---rIrkfd~dGv~---tiaGg~~--G~g~G-----~~dgp~-~~---a~f~~P~gI~~vd~ 147 (445)
|++|+ +|.||++|.+.+ +|.++...+.. ...++.. +.... ...+.. .. .....|.++++...
T Consensus 202 l~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g 281 (353)
T 2g8s_A 202 MAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNS 281 (353)
T ss_dssp EEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECC
T ss_pred eEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECC
Confidence 99999 899999998753 56666544321 0011000 00000 000000 00 01236788876542
Q ss_pred ------CCeEEEEECCCCeEEEEECCCC
Q 013321 148 ------SCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 148 ------dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
+|.|||+|..+++|+++++++.
T Consensus 282 ~~fp~~~g~l~v~~~~~~~v~~~~~~~~ 309 (353)
T 2g8s_A 282 DKFPQWQQKLFIGALKDKDVIVMSVNGD 309 (353)
T ss_dssp SSSGGGTTEEEEEETTTTEEEEEEEETT
T ss_pred ccCcccCCcEEEEEccCCEEEEEEeCCC
Confidence 5899999999999999998753
No 76
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.15 E-value=9.1e-05 Score=70.21 Aligned_cols=142 Identities=12% Similarity=0.176 Sum_probs=91.6
Q ss_pred CCceEEEEcCCCc-EEEEeCC------CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC
Q 013321 21 MEPFSVAVSPSGE-LLVLDSE------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 93 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~------n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~ 93 (445)
..|.+++++++|. ||+++.. ++.|.+++..+ +++...... -..|.+++++++|.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~---~~~~~~~~~----------------~~~~~~~~~s~dg~ 101 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVT---LEVTQAIHN----------------DLKPFGATINNTTQ 101 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTT---CCEEEEEEE----------------SSCCCSEEEETTTT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC---CeEEEEEec----------------CCCcceEEECCCCC
Confidence 5699999999875 8999876 56899999863 333322211 12488999999998
Q ss_pred -EEEEeCCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEEC-CCCeEEEEECCC
Q 013321 94 -IYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-GNQAIREIQLHD 168 (445)
Q Consensus 94 -LYVAD~~N~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~-gn~rIr~i~l~~ 168 (445)
|||++..++.|.++|.. | +.++..+.... ........|.++++......||+++. .+++|+.+++..
T Consensus 102 ~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 102 TLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR--------TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEESCCCCC--------CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT
T ss_pred EEEEEecCCCEEEEEeCCCCeeEEEEecCCCcc--------ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC
Confidence 99999999999999964 4 23332211000 00111224677775444456999984 578899999876
Q ss_pred Cceeec-C-CCCccceEEEEecc
Q 013321 169 DDCSDN-Y-DDTFHLGIFVLVAA 189 (445)
Q Consensus 169 ~~~~~~-~-~~g~P~gIav~~~a 189 (445)
...... . ....|.++++....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 174 IKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp TEEEEEECCCCTTCCCCEEETTT
T ss_pred CceEEEecCCCCccceEEECCCC
Confidence 554432 2 22346666665443
No 77
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.13 E-value=0.00026 Score=67.04 Aligned_cols=134 Identities=10% Similarity=0.123 Sum_probs=86.0
Q ss_pred CceEEEEcCCCc-EEEEeC-CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEe
Q 013321 22 EPFSVAVSPSGE-LLVLDS-ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 98 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs-~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 98 (445)
.|.+++++++|+ ||+++. .+++|.+++... ++........ -..|.+++++++|. ||+++
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~---~~~~~~~~~~---------------~~~~~~~~~s~dg~~l~~~~ 203 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGKESVIWVVDGGN---IKLKTAIQNT---------------GKMSTGLALDSEGKRLYTTN 203 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESSSCEEEEEETTT---TEEEEEECCC---------------CTTCCCCEEETTTTEEEEEC
T ss_pred CCceEEECCCCCEEEEEecCCCceEEEEcCCC---CceEEEecCC---------------CCccceEEECCCCCEEEEEc
Confidence 389999999877 899984 578899999863 3333322210 12588999999988 88887
Q ss_pred CCCCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeecC
Q 013321 99 TMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY 175 (445)
Q Consensus 99 ~~N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~~ 175 (445)
. ++.|.++|... +..+..+.. .....+.++++......||+++..++.|..+++.........
T Consensus 204 ~-~~~i~~~d~~~~~~~~~~~~~~~-------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 204 A-DGELITIDTADNKILSRKKLLDD-------------GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp T-TSEEEEEETTTTEEEEEEECCCS-------------SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred C-CCeEEEEECCCCeEEEEEEcCCC-------------CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 6 78999999644 222222110 011245667654444469999999999999998765543322
Q ss_pred CCCccceEEEEe
Q 013321 176 DDTFHLGIFVLV 187 (445)
Q Consensus 176 ~~g~P~gIav~~ 187 (445)
..+.+.++++..
T Consensus 270 ~~~~~~~~~~s~ 281 (353)
T 3vgz_A 270 AAPESLAVLFNP 281 (353)
T ss_dssp ECSSCCCEEEET
T ss_pred EcCCCceEEECC
Confidence 233344444443
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.11 E-value=0.00015 Score=68.64 Aligned_cols=130 Identities=13% Similarity=0.238 Sum_probs=86.6
Q ss_pred CCCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCcc---EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-E
Q 013321 20 GMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRP---KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-I 94 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v---~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-L 94 (445)
+..|.+++++|+|. ||+++..++.|.+++... ++. ...... -..|.+++++++|. |
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~---~~~~~~~~~~~~----------------~~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGNSIGILETQN---PENITLLNAVGT----------------NNLPGTIVVSRDGSTV 235 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEECSS---TTSCEEEEEEEC----------------SSCCCCEEECTTSSEE
T ss_pred CCCccceEECCCCCEEEEEeCCCCeEEEEECCC---CcccceeeeccC----------------CCCCceEEECCCCCEE
Confidence 45699999999997 999999999999999763 333 111111 13688999999999 9
Q ss_pred EEEeCCCCEEEEEcCC-C-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCce
Q 013321 95 YIADTMNMAIRKISDT-G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 95 YVAD~~N~rIrkfd~d-G-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
||++...+.|.++|.. | +..+.....+. ..+ ........+++ .+++| .|||+...++.|..+++.....
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~-~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTLSFVKSFGHGL---LID----PRPLFGANQMA-LNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECCC---CCC----CGGGTTCCCEE-ECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred EEEEcCCCEEEEEECCCCceeeeccccccc---ccC----CCCcccccceE-ECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 9999888899999965 4 22221111000 000 01111224565 45665 6899999999999999887665
Q ss_pred eecCC
Q 013321 172 SDNYD 176 (445)
Q Consensus 172 ~~~~~ 176 (445)
.....
T Consensus 308 ~~~~~ 312 (331)
T 3u4y_A 308 GYVAG 312 (331)
T ss_dssp EECTT
T ss_pred cceec
Confidence 54433
No 79
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.08 E-value=0.00014 Score=70.94 Aligned_cols=115 Identities=11% Similarity=-0.011 Sum_probs=77.1
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
.+.|++++. +.||+++..+++|.++|... .++...+-. + ...+.||+.| .+.|||+| +.
T Consensus 67 fgeGi~~~g-~~lyv~t~~~~~v~viD~~t---~~v~~~i~~--g-------------~~~g~glt~D-g~~l~vs~-gs 125 (266)
T 2iwa_A 67 FGEGLTLLN-EKLYQVVWLKNIGFIYDRRT---LSNIKNFTH--Q-------------MKDGWGLATD-GKILYGSD-GT 125 (266)
T ss_dssp CEEEEEEET-TEEEEEETTCSEEEEEETTT---TEEEEEEEC--C-------------SSSCCEEEEC-SSSEEEEC-SS
T ss_pred ceEEEEEeC-CEEEEEEecCCEEEEEECCC---CcEEEEEEC--C-------------CCCeEEEEEC-CCEEEEEC-CC
Confidence 466888874 58999999999999999863 222211111 1 0023456554 34599999 68
Q ss_pred CEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 102 MAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 102 ~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
++|.+||... +.++.-+..+ ..+..|+.+.++ +|.||+.....+.|.+|++....+
T Consensus 126 ~~l~viD~~t~~v~~~I~Vg~~~------------~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 126 SILYEIDPHTFKLIKKHNVKYNG------------HRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp SEEEEECTTTCCEEEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCE
T ss_pred CeEEEEECCCCcEEEEEEECCCC------------cccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcE
Confidence 8999999776 3343322111 123467788765 679999998899999999977544
No 80
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.08 E-value=9.9e-05 Score=72.00 Aligned_cols=112 Identities=10% Similarity=0.087 Sum_probs=77.6
Q ss_pred CCceEEEEcCCCcEEEEeC--CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEe
Q 013321 21 MEPFSVAVSPSGELLVLDS--ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs--~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 98 (445)
..|.||+++++|.||++.. +.+.|.+++... |++....-.+. -..+.|++++ .+.||+++
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~t---g~v~~~i~l~~--------------~~fgeGi~~~-g~~lyv~t 82 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQT---GKVENIHKMDD--------------SYFGEGLTLL-NEKLYQVV 82 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTT---CCEEEEEECCT--------------TCCEEEEEEE-TTEEEEEE
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCC---CCEEEEEecCC--------------CcceEEEEEe-CCEEEEEE
Confidence 3589999999899999975 478999999874 55443322210 2245688888 45799999
Q ss_pred CCCCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc
Q 013321 99 TMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 99 ~~N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~ 170 (445)
+.+++|.++|... +.++..+ .+ .++++. .+.+.|||+| +.++|..|++....
T Consensus 83 ~~~~~v~viD~~t~~v~~~i~~g-~~----------------~g~glt--~Dg~~l~vs~-gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 83 WLKNIGFIYDRRTLSNIKNFTHQ-MK----------------DGWGLA--TDGKILYGSD-GTSILYEIDPHTFK 137 (266)
T ss_dssp TTCSEEEEEETTTTEEEEEEECC-SS----------------SCCEEE--ECSSSEEEEC-SSSEEEEECTTTCC
T ss_pred ecCCEEEEEECCCCcEEEEEECC-CC----------------CeEEEE--ECCCEEEEEC-CCCeEEEEECCCCc
Confidence 9999999999764 3333222 11 123333 3456899998 68899999987633
No 81
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.08 E-value=3e-05 Score=83.26 Aligned_cols=120 Identities=23% Similarity=0.250 Sum_probs=78.7
Q ss_pred CCceEEEEcC-CCcEEEEeCCC---------------------CeEEEEeCCCCC------CCccEEEecCCCCccc---
Q 013321 21 MEPFSVAVSP-SGELLVLDSEN---------------------SNIYKISTSLSP------YSRPKLVAGSPEGYYG--- 69 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n---------------------~rI~kid~dg~~------~G~v~~vaG~~~G~~G--- 69 (445)
..|.+|+++| +|+|||+-+.| +.|+++..++.- ...+.+++|.+....+
T Consensus 384 dRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~ 463 (592)
T 4a9v_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred cCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccccc
Confidence 5699999999 89999997643 779999764321 1133455665531110
Q ss_pred -CCCCCccCccCCCcceEEEcCCCCEEE-EeCC-----------CCEEEEEcC-CC-cEEEecCcccCCCCCCCCCccCc
Q 013321 70 -HVDGRPRGARMNHPKGLAVDDRGNIYI-ADTM-----------NMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDA 134 (445)
Q Consensus 70 -~~dG~~~~a~Ln~P~GIavD~dG~LYV-AD~~-----------N~rIrkfd~-dG-v~tiaGg~~G~g~G~~dgp~~~a 134 (445)
...+......|+.|.+|+||++|+||| +|.. ++.|.++++ .| +..++.+.
T Consensus 464 ~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P--------------- 528 (592)
T 4a9v_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP--------------- 528 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC---------------
T ss_pred cCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC---------------
Confidence 001122345799999999999999999 8863 668999997 45 44443221
Q ss_pred ccCCCceEEEECCCCeEEEEE
Q 013321 135 KFSNDFDVVYVGSSCSLLVID 155 (445)
Q Consensus 135 ~f~~P~gI~~vd~dG~LyVaD 155 (445)
.+..|+++++.++...|||+-
T Consensus 529 ~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 529 IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp TTCEEEEEEECTTSSEEEEEE
T ss_pred CCccccCCEECCCCCEEEEEE
Confidence 134678887654445777774
No 82
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.05 E-value=0.00013 Score=70.57 Aligned_cols=120 Identities=11% Similarity=0.162 Sum_probs=80.6
Q ss_pred CCCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEE
Q 013321 20 GMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 97 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 97 (445)
+..|.+++++|+|. ||+++..++.|..++.+. |.+..+.... .. ...+..|.+|+++++|. |||+
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~---g~~~~~~~~~-~~---------~~~~~~~~~i~~spdg~~l~v~ 276 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD---GMLDEIQTVA-AD---------TVNAQGSGDIHLSPDGKYLYAS 276 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEET---TEEEEEEEEE-SC---------SSCCCCEEEEEECTTSSEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC---CceEEeEEEe-cC---------CCCCCCcccEEECCCCCEEEEE
Confidence 45799999999997 899998889999998752 4443322111 00 01245688999999998 8899
Q ss_pred eCC-CCEEEEEcC---CCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECC
Q 013321 98 DTM-NMAIRKISD---TGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 98 D~~-N~rIrkfd~---dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~ 167 (445)
+.. +++|..++. +|.......... -..|.+++ .+++| .||+++..++.|..+..+
T Consensus 277 ~~~~~~~i~v~~~~~~~g~~~~~~~~~~--------------g~~~~~~~-~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 277 NRLKADGVAIFKVDETNGTLTKVGYQLT--------------GIHPRNFI-ITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp ECSSSCEEEEEEECTTTCCEEEEEEEEC--------------SSCCCEEE-ECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCEEEEEEEcCCCCcEEEeeEecC--------------CCCCceEE-ECCCCCEEEEEECCCCCEEEEEEE
Confidence 998 788888763 343222111000 12567776 57777 589999888888886544
No 83
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.02 E-value=0.00026 Score=68.42 Aligned_cols=119 Identities=14% Similarity=0.187 Sum_probs=79.1
Q ss_pred CceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCC----c-cEEE-----ecCCCCcccCCCCCccCccCCCcceEEEcC
Q 013321 22 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYS----R-PKLV-----AGSPEGYYGHVDGRPRGARMNHPKGLAVDD 90 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G----~-v~~v-----aG~~~G~~G~~dG~~~~a~Ln~P~GIavD~ 90 (445)
.|++++++|+|. ||+++..+++|..++.+... + + +... .-.. .-..|.++++++
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~-~~~~~~~l~~~~~~~~~~~~--------------~~~~~~~~~~sp 220 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNA-NADNKEKFLTKGTPEAFKVA--------------PGSGPRHLIFNS 220 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTC-CTTTCCCCEEEEEEEEEECC--------------TTCCEEEEEECT
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCC-CcccccceeecccccceecC--------------CCCCCeEEEEcC
Confidence 458899999997 99999988988888655211 1 1 2111 0000 123688999999
Q ss_pred CCC-EEEEeCCCCEEEEEcC-CCc-EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECC-CCeEEEEE
Q 013321 91 RGN-IYIADTMNMAIRKISD-TGV-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRG-NQAIREIQ 165 (445)
Q Consensus 91 dG~-LYVAD~~N~rIrkfd~-dGv-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~g-n~rIr~i~ 165 (445)
+|. |||++..+++|.+++. +|. ..+..... ....+..|.+++ .+++| .||+++.+ .+.|..++
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~-----------~~~~~~~~~~i~-~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA-----------DTVNAQGSGDIH-LSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEES-----------CSSCCCCEEEEE-ECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEec-----------CCCCCCCcccEE-ECCCCCEEEEECCCCCCEEEEEE
Confidence 997 9999988899999984 342 22211000 011234567776 57777 58899998 88999988
Q ss_pred CC
Q 013321 166 LH 167 (445)
Q Consensus 166 l~ 167 (445)
++
T Consensus 289 ~~ 290 (361)
T 3scy_A 289 VD 290 (361)
T ss_dssp EC
T ss_pred Ec
Confidence 75
No 84
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.95 E-value=0.001 Score=62.27 Aligned_cols=121 Identities=13% Similarity=0.143 Sum_probs=78.8
Q ss_pred CCCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEE---EecCCCCcccCCCCCccCccCCCcceEEEcCCCC-E
Q 013321 20 GMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKL---VAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-I 94 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~---vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-L 94 (445)
+..|.+++++|+|. ||+++..+++|..++.+.. .+.+.. +...+.+. .....|.+|+++++|. |
T Consensus 177 ~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~~~~~~~~~~~~~~----------~~~~~~~~i~~s~dg~~l 245 (343)
T 1ri6_A 177 GAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNIECVQTLDMMPENF----------SDTRWAADIHITPDGRHL 245 (343)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCCEEEEEEECSCTTC----------CSCCCEEEEEECTTSSEE
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEeeccccCccc----------cccCCccceEECCCCCEE
Confidence 35799999999987 8899988899999987521 133322 21111111 1245688999999996 8
Q ss_pred EEEeCCCCEEEEEcCC---C-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECC
Q 013321 95 YIADTMNMAIRKISDT---G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 95 YVAD~~N~rIrkfd~d---G-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~ 167 (445)
||++..++.|.+++.+ + ...+..... -..|.+++ .+++| .||+++..++.|..++.+
T Consensus 246 ~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~---------------~~~~~~~~-~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 246 YACDRTASLITVFSVSEDGSVLSKEGFQPT---------------ETQPRGFN-VDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEETTTTEEEEEEECTTSCCEEEEEEEEC---------------SSSCCCEE-ECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEEecCCCEEEEEEEcCCCCceEEeeeecC---------------CCccceEE-ECCCCCEEEEecCCCCeEEEEEEc
Confidence 8899888999999854 2 222211000 01256666 46666 588888778888887543
No 85
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.88 E-value=9.1e-05 Score=76.99 Aligned_cols=122 Identities=13% Similarity=0.116 Sum_probs=75.0
Q ss_pred CCceEEEEcC----CCcEEEEeCC------------CCeEEEEeCCCCC--CCccEEEe-cCCCCcccCCCCCccCccCC
Q 013321 21 MEPFSVAVSP----SGELLVLDSE------------NSNIYKISTSLSP--YSRPKLVA-GSPEGYYGHVDGRPRGARMN 81 (445)
Q Consensus 21 ~~P~gIAVdp----dG~LYVaDs~------------n~rI~kid~dg~~--~G~v~~va-G~~~G~~G~~dG~~~~a~Ln 81 (445)
..+.|||++| +|.|||+++. .++|.|++.+... .....++. +.+. ....
T Consensus 77 ~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~------------~~~H 144 (454)
T 1cru_A 77 NGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS------------SKDH 144 (454)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC------------CSSC
T ss_pred CceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC------------CCCC
Confidence 4577999999 7889999964 4689999864211 11222232 2221 1245
Q ss_pred CcceEEEcCCCCEEEEeC--C------------------------------CCEEEEEcCCCcEEEecCcccCCCCCCCC
Q 013321 82 HPKGLAVDDRGNIYIADT--M------------------------------NMAIRKISDTGVTTIAGGKWSRGVGHVDG 129 (445)
Q Consensus 82 ~P~GIavD~dG~LYVAD~--~------------------------------N~rIrkfd~dGv~tiaGg~~G~g~G~~dg 129 (445)
.+.+|+++++|.|||+-. . .++|.||+.+|... .++... .+. ..
T Consensus 145 ~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip-~~Npf~--~~~-~~ 220 (454)
T 1cru_A 145 QSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIP-KDNPSF--NGV-VS 220 (454)
T ss_dssp CEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCC-TTCCEE--TTE-EC
T ss_pred CCCeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCC-CCCCCC--CCC-cc
Confidence 789999999999999833 1 36899999887310 000000 000 00
Q ss_pred CccCcccCCCceEEEECCCCeEEEEECCCC
Q 013321 130 PSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 159 (445)
Q Consensus 130 p~~~a~f~~P~gI~~vd~dG~LyVaD~gn~ 159 (445)
-.-..-+.+|++++ .+++|.||++|.+.+
T Consensus 221 ei~a~G~RNp~gla-~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 221 HIYTLGHRNPQGLA-FTPNGKLLQSEQGPN 249 (454)
T ss_dssp SEEEBCCSEEEEEE-ECTTSCEEEEEECSS
T ss_pred eEEEECCCCcceEE-ECCCCCEEEEecCCC
Confidence 00112357899997 577899999998654
No 86
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.82 E-value=9.7e-05 Score=71.57 Aligned_cols=79 Identities=20% Similarity=0.305 Sum_probs=61.0
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
..+.+|++|| .|+|||+...+++|..++.+ |++..+.--..|..|- ...+..|.|||+|++|+|||+.-
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~----g~~~~~~~L~~g~~~l------~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLV----GEVIGEMSLTKGSRGL------SHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTT----CCEEEEEECSTTGGGC------SSCCCSEEEEEECTTCCEEEEET
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCC----CCEEEEEEcCCccCCc------ccccCCCCeeEECCCCCEEEEcC
Confidence 5789999999 78999999999999999998 5554444332233331 22478999999999999999976
Q ss_pred CCCEEEEEcCC
Q 013321 100 MNMAIRKISDT 110 (445)
Q Consensus 100 ~N~rIrkfd~d 110 (445)
.| .+.+|.+.
T Consensus 243 ~n-~~y~f~~~ 252 (255)
T 3qqz_A 243 PN-RFYRFTPQ 252 (255)
T ss_dssp TT-EEEEEEC-
T ss_pred Cc-eEEEEEec
Confidence 65 89999864
No 87
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.74 E-value=0.0007 Score=63.88 Aligned_cols=112 Identities=13% Similarity=0.158 Sum_probs=74.7
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcce-EEEcCCCC-EEE
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKG-LAVDDRGN-IYI 96 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~G-IavD~dG~-LYV 96 (445)
..| +++++++|. ||+++..++.|++++..+ +++ ...... -..|.. ++++++|. ||+
T Consensus 41 ~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~---~~~~~~~~~~----------------~~~~~~~~~~s~dg~~l~~ 100 (331)
T 3u4y_A 41 DFV-DTAITSDCSNVVVTSDFCQTLVQIETQL---EPPKVVAIQE----------------GQSSMADVDITPDDQFAVT 100 (331)
T ss_dssp CEE-EEEECSSSCEEEEEESTTCEEEEEECSS---SSCEEEEEEE----------------CSSCCCCEEECTTSSEEEE
T ss_pred Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCC---CceeEEeccc----------------CCCCccceEECCCCCEEEE
Confidence 346 999999987 999999889999999874 343 222111 125667 99999998 564
Q ss_pred EeCCCC--EEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCe-EEEEECCC
Q 013321 97 ADTMNM--AIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQA-IREIQLHD 168 (445)
Q Consensus 97 AD~~N~--rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~r-Ir~i~l~~ 168 (445)
++..++ .|.++|...-..+.-... -..|.+++ .+++| .||+++..++. |+.++++.
T Consensus 101 ~~~~~~~~~i~v~d~~~~~~~~~~~~---------------~~~~~~~~-~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 101 VTGLNHPFNMQSYSFLKNKFISTIPI---------------PYDAVGIA-ISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp CCCSSSSCEEEEEETTTTEEEEEEEC---------------CTTEEEEE-ECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred ecCCCCcccEEEEECCCCCeEEEEEC---------------CCCccceE-ECCCCCEEEEEecCCCceEEEEEECC
Confidence 444335 899999654221111000 01356776 57777 59999998778 88777664
No 88
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.74 E-value=0.0019 Score=62.99 Aligned_cols=112 Identities=12% Similarity=0.071 Sum_probs=74.2
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
..||+++. +.||+++..++++.++|... .++ ..+.-.. .+.|++.| .+.||++|. .
T Consensus 89 geGit~~g-~~ly~ltw~~~~v~v~D~~t---~~~~~ti~~~~-----------------eG~glt~d-g~~L~~SdG-s 145 (262)
T 3nol_A 89 GEGISDWK-DKIVGLTWKNGLGFVWNIRN---LRQVRSFNYDG-----------------EGWGLTHN-DQYLIMSDG-T 145 (262)
T ss_dssp EEEEEEET-TEEEEEESSSSEEEEEETTT---CCEEEEEECSS-----------------CCCCEEEC-SSCEEECCS-S
T ss_pred eeEEEEeC-CEEEEEEeeCCEEEEEECcc---CcEEEEEECCC-----------------CceEEecC-CCEEEEECC-C
Confidence 46678764 58999999999999999863 222 2221110 33477766 357999995 7
Q ss_pred CEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 102 MAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 102 ~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
++|..+|+.. +.++.-+..| ..+..++.+.++ +|.||+.....+.|.+|++....+
T Consensus 146 ~~i~~iDp~T~~v~~~I~V~~~g------------~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 146 PVLRFLDPESLTPVRTITVTAHG------------EELPELNELEWV--DGEIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp SEEEEECTTTCSEEEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBE
T ss_pred CeEEEEcCCCCeEEEEEEeccCC------------ccccccceeEEE--CCEEEEEEccCCeEEEEECCCCcE
Confidence 8999999765 2333221111 123344556554 678999998888999999876544
No 89
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.72 E-value=0.00067 Score=65.64 Aligned_cols=126 Identities=10% Similarity=0.140 Sum_probs=80.7
Q ss_pred ceEEEEcCCC-cEEEEeCCCC-eEEEEeCCCCCCC-ccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 23 PFSVAVSPSG-ELLVLDSENS-NIYKISTSLSPYS-RPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 23 P~gIAVdpdG-~LYVaDs~n~-rI~kid~dg~~~G-~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..|||+|+++ .||++.-... .|+.++. -..+ .+..+ ..+. .. ....+..+.+|++|+ .|.|||..
T Consensus 123 ~EGLA~d~~~~~L~va~E~~p~~i~~~~g--~~~~~~l~i~-~~~~-~~-------~~~~~~d~S~l~~dp~tg~lliLS 191 (255)
T 3qqz_A 123 FEGLAYSRQDHTFWFFKEKNPIEVYKVNG--LLSSNELHIS-KDKA-LQ-------RQFTLDDVSGAEFNQQKNTLLVLS 191 (255)
T ss_dssp CEEEEEETTTTEEEEEEESSSEEEEEEES--TTCSSCCEEE-ECHH-HH-------HTCCSSCCCEEEEETTTTEEEEEE
T ss_pred cceEEEeCCCCEEEEEECcCCceEEEEcc--cccCCceeee-cchh-hc-------cccccCCceeEEEcCCCCeEEEEE
Confidence 4999999965 6998876554 7888872 1111 12221 1100 00 011355789999998 77799999
Q ss_pred CCCCEEEEEcCCCcEEEe-cCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 99 TMNMAIRKISDTGVTTIA-GGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 99 ~~N~rIrkfd~dGv~tia-Gg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
..+++|..+|.+|..+-. --..|. ......+..|.||+ +|++|+|||+.-.| .+++|....
T Consensus 192 ~~s~~L~~~d~~g~~~~~~~L~~g~-------~~l~~~~~qpEGia-~d~~G~lyIvsE~n-~~y~f~~~~ 253 (255)
T 3qqz_A 192 HESRALQEVTLVGEVIGEMSLTKGS-------RGLSHNIKQAEGVA-MDASGNIYIVSEPN-RFYRFTPQS 253 (255)
T ss_dssp TTTTEEEEECTTCCEEEEEECSTTG-------GGCSSCCCSEEEEE-ECTTCCEEEEETTT-EEEEEEC--
T ss_pred CCCCeEEEEcCCCCEEEEEEcCCcc-------CCcccccCCCCeeE-ECCCCCEEEEcCCc-eEEEEEecC
Confidence 999999999999942111 111010 01123467899997 69999999997764 999998653
No 90
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.72 E-value=0.0028 Score=61.15 Aligned_cols=113 Identities=21% Similarity=0.315 Sum_probs=80.3
Q ss_pred CceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC
Q 013321 22 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 99 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 99 (445)
.+.+++++++|. ||++...++.|..++... ++....... -..+.+++++++|. |||+..
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTS---NTVAGTVKT----------------GKSPLGLALSPDGKKLYVTNN 135 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEEC----------------SSSEEEEEECTTSSEEEEEET
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCC---CeEEEEEeC----------------CCCcceEEECCCCCEEEEEeC
Confidence 689999999887 788988889999999873 343332221 12468999999998 779999
Q ss_pred CCCEEEEEcCC-Cc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCcee
Q 013321 100 MNMAIRKISDT-GV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDDCS 172 (445)
Q Consensus 100 ~N~rIrkfd~d-Gv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~~~~~~ 172 (445)
.++.|+.+|.. +. .++..+ ..|.+++ ..+++ .||++...++.|+.+++....+.
T Consensus 136 ~~~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~-~~~dg~~l~~~~~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 136 GDKTVSVINTVTKAVINTVSVG------------------RSPKGIA-VTPDGTKVYVANFDSMSISVIDTVTNSVI 193 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECC------------------SSEEEEE-ECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCcEEEEEecC------------------CCcceEE-ECCCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 89999999954 42 222111 1245555 45555 67788888899999998765443
No 91
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.69 E-value=0.00085 Score=62.87 Aligned_cols=117 Identities=12% Similarity=0.087 Sum_probs=77.9
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEe
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 98 (445)
..|.+++++|+|. ||+++..++.|..++.+.. .+....+.... . -..|.+|+++++|. ||+++
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~----~----------~~~~~~~~~s~dg~~l~~~~ 102 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD-DGALTFAAESA----L----------PGSLTHISTDHQGQFVFVGS 102 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEE----C----------SSCCSEEEECTTSSEEEEEE
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCC-CCceeeccccc----c----------CCCCcEEEEcCCCCEEEEEe
Confidence 4789999999987 8888887788888765411 13333322110 0 11688999999998 88999
Q ss_pred CCCCEEEEEcC-CCc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCC
Q 013321 99 TMNMAIRKISD-TGV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 99 ~~N~rIrkfd~-dGv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~~ 168 (445)
...+.|..++. +|. ..+.... ....|.+++ .+++| .||+++..+++|+.+++..
T Consensus 103 ~~~~~i~~~d~~~~~~~~~~~~~~---------------~~~~~~~~~-~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 103 YNAGNVSVTRLEDGLPVGVVDVVE---------------GLDGCHSAN-ISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp TTTTEEEEEEEETTEEEEEEEEEC---------------CCTTBCCCE-ECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cCCCeEEEEECCCCcccccccccc---------------CCCCceEEE-ECCCCCEEEEecCCCCEEEEEEecC
Confidence 88888998885 331 1111000 012356665 46666 6899988889999999865
No 92
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.66 E-value=0.0034 Score=60.49 Aligned_cols=112 Identities=17% Similarity=0.148 Sum_probs=73.9
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
..||+++. +.||+++..+++++++|... .++ ..+.-. ..+.||+.| .+.||++|. .
T Consensus 67 geGi~~~~-~~ly~ltw~~~~v~v~D~~t---l~~~~ti~~~-----------------~~Gwglt~d-g~~L~vSdg-s 123 (243)
T 3mbr_X 67 GAGIVAWR-DRLIQLTWRNHEGFVYDLAT---LTPRARFRYP-----------------GEGWALTSD-DSHLYMSDG-T 123 (243)
T ss_dssp EEEEEEET-TEEEEEESSSSEEEEEETTT---TEEEEEEECS-----------------SCCCEEEEC-SSCEEEECS-S
T ss_pred eeEEEEeC-CEEEEEEeeCCEEEEEECCc---CcEEEEEeCC-----------------CCceEEeeC-CCEEEEECC-C
Confidence 46777764 68999999999999999863 222 222111 034577766 457999995 8
Q ss_pred CEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 102 MAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 102 ~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
++|..+|+.. +.++.-+..+ ..+...+.+.++ +|.||+.....+.|.+|++....+
T Consensus 124 ~~l~~iDp~t~~~~~~I~V~~~g------------~~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 124 AVIRKLDPDTLQQVGSIKVTAGG------------RPLDNLNELEWV--NGELLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp SEEEEECTTTCCEEEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTTTEEEEECTTTCBE
T ss_pred CeEEEEeCCCCeEEEEEEEccCC------------cccccceeeEEe--CCEEEEEECCCCeEEEEECCCCCE
Confidence 8999999765 2333222111 122344555543 678998888888999999876544
No 93
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.66 E-value=0.0011 Score=64.74 Aligned_cols=112 Identities=12% Similarity=0.014 Sum_probs=75.6
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
..||+++. +.||+++..++++.++|... .++ ..+.-. ..+.||+.| .+.||++| +.
T Consensus 98 geGit~~g-~~Ly~ltw~~~~v~V~D~~T---l~~~~ti~~~-----------------~eGwGLt~D-g~~L~vSd-Gs 154 (268)
T 3nok_A 98 AEGLASDG-ERLYQLTWTEGLLFTWSGMP---PQRERTTRYS-----------------GEGWGLCYW-NGKLVRSD-GG 154 (268)
T ss_dssp EEEEEECS-SCEEEEESSSCEEEEEETTT---TEEEEEEECS-----------------SCCCCEEEE-TTEEEEEC-SS
T ss_pred eeEEEEeC-CEEEEEEccCCEEEEEECCc---CcEEEEEeCC-----------------CceeEEecC-CCEEEEEC-CC
Confidence 46788875 58999999999999999863 222 222111 124588876 35799999 58
Q ss_pred CEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 102 MAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 102 ~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
++|..+|+.. +.++.-+..+ ..+..++.+.++ +|.||+.....+.|.+|++....+
T Consensus 155 ~~l~~iDp~T~~v~~~I~V~~~g------------~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 155 TMLTFHEPDGFALVGAVQVKLRG------------QPVELINELECA--NGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp SEEEEECTTTCCEEEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBE
T ss_pred CEEEEEcCCCCeEEEEEEeCCCC------------cccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcE
Confidence 9999999765 2333221111 123345666654 679999998889999999876544
No 94
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.61 E-value=0.0019 Score=63.07 Aligned_cols=131 Identities=17% Similarity=0.124 Sum_probs=80.0
Q ss_pred CCCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEE
Q 013321 20 GMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 97 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 97 (445)
+..|++++++|||. ||++|.++++|..++.+. .|++..+.... ... .-..|.+++++++|. |||+
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~--~g~~~~~~~~~-~~~----------~g~~p~~~~~spdg~~l~v~ 210 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLA--SGEVELVGSVD-APD----------PGDHPRWVAMHPTGNYLYAL 210 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECT--TSCEEEEEEEE-CSS----------TTCCEEEEEECTTSSEEEEE
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEECC--CCCEEEeeeEe-cCC----------CCCCCCEeEECCCCCEEEEE
Confidence 35799999999997 899998889999998751 14443321100 000 023689999999996 8999
Q ss_pred eCCCCEEEEEc--C-CCcEE-----EecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCC-----eEEE
Q 013321 98 DTMNMAIRKIS--D-TGVTT-----IAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQ-----AIRE 163 (445)
Q Consensus 98 D~~N~rIrkfd--~-dGv~t-----iaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~-----rIr~ 163 (445)
+..++.|..++ . +|... +.....+. .+. ..+ ......|.++++++++| .||+++.+.+ +|..
T Consensus 211 ~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~-~g~-~~~--~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v 286 (365)
T 1jof_A 211 MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI-PDR-DPE--TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAG 286 (365)
T ss_dssp ETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC-CCB-CTT--TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEE
T ss_pred ECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc-CCc-ccc--cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEE
Confidence 98888888875 2 35321 21111000 000 000 00112466775256777 6899988766 8888
Q ss_pred EECC
Q 013321 164 IQLH 167 (445)
Q Consensus 164 i~l~ 167 (445)
++++
T Consensus 287 ~~~~ 290 (365)
T 1jof_A 287 FKLR 290 (365)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8875
No 95
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.56 E-value=0.0046 Score=59.67 Aligned_cols=113 Identities=19% Similarity=0.389 Sum_probs=78.5
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEe
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 98 (445)
..|.+++++++|. ||++...++.|..++... +++....... ..+.+++++++|. ||++.
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~---~~~~~~~~~~----------------~~v~~~~~spdg~~l~~~~ 92 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT---NNVIATVPAG----------------SSPQGVAVSPDGKQVYVTN 92 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTT---TEEEEEEECS----------------SSEEEEEECTTSSEEEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCC---CeEEEEEECC----------------CCccceEECCCCCEEEEEE
Confidence 3589999999987 778988889999999763 4443332211 1578999999998 88999
Q ss_pred CCCCEEEEEcCCCc---EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCce
Q 013321 99 TMNMAIRKISDTGV---TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 99 ~~N~rIrkfd~dGv---~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
...+.|+++|...- .++..+ ..+.+++ ..+++ .||++...++.|+.+++....+
T Consensus 93 ~~~~~v~v~d~~~~~~~~~~~~~------------------~~~~~~~-~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 93 MASSTLSVIDTTSNTVAGTVKTG------------------KSPLGLA-LSPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECS------------------SSEEEEE-ECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCeEEEEEeCC------------------CCcceEE-ECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 88899999996542 222111 1245555 45555 4667888788888888765443
No 96
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.50 E-value=0.0016 Score=62.75 Aligned_cols=109 Identities=15% Similarity=0.067 Sum_probs=75.5
Q ss_pred CCceEEEEcCCCcEEEEeCC--CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEe
Q 013321 21 MEPFSVAVSPSGELLVLDSE--NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~--n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 98 (445)
..-.|++++. +.||++... .+.|.+++... |++......+.. ....||+++ .+.||+++
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~t---gkv~~~~~l~~~--------------~fgeGi~~~-~~~ly~lt 81 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLET---GRILQRAEVPPP--------------YFGAGIVAW-RDRLIQLT 81 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTT---CCEEEEEECCTT--------------CCEEEEEEE-TTEEEEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCC---CCEEEEEeCCCC--------------cceeEEEEe-CCEEEEEE
Confidence 3457999987 799999764 57999999973 555544332211 133578887 46799999
Q ss_pred CCCCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 99 TMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 99 ~~N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
+.+++|.++|.+. +.++..+. .+++|+ ...+.||++| +.++|+.+++...
T Consensus 82 w~~~~v~v~D~~tl~~~~ti~~~~------------------~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~ 134 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRARFRYPG------------------EGWALT--SDDSHLYMSD-GTAVIRKLDPDTL 134 (243)
T ss_dssp SSSSEEEEEETTTTEEEEEEECSS------------------CCCEEE--ECSSCEEEEC-SSSEEEEECTTTC
T ss_pred eeCCEEEEEECCcCcEEEEEeCCC------------------CceEEe--eCCCEEEEEC-CCCeEEEEeCCCC
Confidence 9999999999765 33332211 245554 3456899998 5888999998763
No 97
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.41 E-value=0.0013 Score=61.82 Aligned_cols=117 Identities=9% Similarity=0.029 Sum_probs=77.5
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMN 101 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~N 101 (445)
+.|+++.+++.+||+...++.|.+++... +++......+ ....|.+++++++|. +||++..+
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~~v~~~d~~~---~~~~~~~~~~--------------~~~~~~~~~~s~dg~~~~v~~~~~ 64 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPNNLHVVDVAS---DTVYKSCVMP--------------DKFGPGTAMMAPDNRTAYVLNNHY 64 (349)
T ss_dssp --CCCCCTTCEEEEEEETTTEEEEEETTT---TEEEEEEECS--------------SCCSSCEEEECTTSSEEEEEETTT
T ss_pred CccccccCCCEEEEEeCCCCeEEEEECCC---CcEEEEEecC--------------CCCCCceeEECCCCCEEEEEeCCC
Confidence 45778888899999999999999999863 4433222111 012488999999997 89999989
Q ss_pred CEEEEEcCC-Cc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECC-----------CCeEEEEEC
Q 013321 102 MAIRKISDT-GV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRG-----------NQAIREIQL 166 (445)
Q Consensus 102 ~rIrkfd~d-Gv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~g-----------n~rIr~i~l 166 (445)
+.|.++|.. +. ..+..... + ...-..|.+++ .+++| .||+++.. ++.|+.+++
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~---------~--~~~~~~~~~~~-~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~ 132 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSV---------P--GEVGRSMYSFA-ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST 132 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCS---------T--TEEEECSSCEE-ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred CcEEEEeCCCCcEEEEEEcccc---------c--ccccccccceE-ECCCCCEEEEEcccccccccccccCCCeEEEEEC
Confidence 999999965 42 22221100 0 00112466776 46666 67887754 579999997
Q ss_pred CC
Q 013321 167 HD 168 (445)
Q Consensus 167 ~~ 168 (445)
..
T Consensus 133 ~~ 134 (349)
T 1jmx_B 133 AD 134 (349)
T ss_dssp GG
T ss_pred CC
Confidence 65
No 98
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.37 E-value=0.0021 Score=62.94 Aligned_cols=106 Identities=12% Similarity=0.097 Sum_probs=73.3
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 102 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~ 102 (445)
-.||.++ ++.||++....++|.+++... |++.... .+.. ....||+++. +.||++++.++
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~T---gkv~~~~-l~~~--------------~FgeGit~~g-~~Ly~ltw~~~ 116 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLES---AQPVWME-RLGN--------------IFAEGLASDG-ERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSC---SSCSEEE-ECTT--------------CCEEEEEECS-SCEEEEESSSC
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCC---CcEEeEE-CCCC--------------cceeEEEEeC-CEEEEEEccCC
Confidence 3699998 479999999999999999874 4432222 2111 1335788874 57999999999
Q ss_pred EEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 103 AIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 103 rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
+|.++|... +.++.... .+++++ ...+.||++| +.++|+.|++...
T Consensus 117 ~v~V~D~~Tl~~~~ti~~~~------------------eGwGLt--~Dg~~L~vSd-Gs~~l~~iDp~T~ 165 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRYSG------------------EGWGLC--YWNGKLVRSD-GGTMLTFHEPDGF 165 (268)
T ss_dssp EEEEEETTTTEEEEEEECSS------------------CCCCEE--EETTEEEEEC-SSSEEEEECTTTC
T ss_pred EEEEEECCcCcEEEEEeCCC------------------ceeEEe--cCCCEEEEEC-CCCEEEEEcCCCC
Confidence 999999765 33332211 234554 2346899998 5889999997763
No 99
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.36 E-value=0.0019 Score=62.91 Aligned_cols=106 Identities=11% Similarity=-0.002 Sum_probs=71.4
Q ss_pred eEEEEcCCCcEEEEeCC--CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 24 FSVAVSPSGELLVLDSE--NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 24 ~gIAVdpdG~LYVaDs~--n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
.||.++ +|.||++... .+.|.+++... |++......+.. ....||+++. +.||++++.+
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~vD~~T---gkv~~~~~l~~~--------------~FgeGit~~g-~~ly~ltw~~ 106 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRKVDIES---GKTLQQIELGKR--------------YFGEGISDWK-DKIVGLTWKN 106 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEECTTT---CCEEEEEECCTT--------------CCEEEEEEET-TEEEEEESSS
T ss_pred ceEEEE-CCEEEEECCCCCCceEEEEECCC---CcEEEEEecCCc--------------cceeEEEEeC-CEEEEEEeeC
Confidence 899998 7899999864 46999999874 555433322111 1335788874 5799999999
Q ss_pred CEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 102 MAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 102 ~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
+++.++|.+. +.++.-+. .+++++ .+.+.||++| +.++|+.|++...
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~------------------eG~glt--~dg~~L~~Sd-Gs~~i~~iDp~T~ 156 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDG------------------EGWGLT--HNDQYLIMSD-GTPVLRFLDPESL 156 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSS------------------CCCCEE--ECSSCEEECC-SSSEEEEECTTTC
T ss_pred CEEEEEECccCcEEEEEECCC------------------CceEEe--cCCCEEEEEC-CCCeEEEEcCCCC
Confidence 9999999754 33443221 223443 3346788888 4788888887653
No 100
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.32 E-value=0.0039 Score=58.11 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=72.3
Q ss_pred CceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC
Q 013321 22 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 99 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 99 (445)
.|.+++++++|. ||+++..++.|.+++..+ ++........ ..+ ..-..|.+++++++|. ||+++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~--~~~--------~~~~~~~~~~~s~dg~~l~~~~~ 101 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVT---GETLGRIDLS--TPE--------ERVKSLFGAALSPDGKTLAIYES 101 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTT---CCEEEEEECC--BTT--------EEEECTTCEEECTTSSEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCC---CCeEeeEEcC--Ccc--------cccccccceEECCCCCEEEEEec
Confidence 589999999984 899999889999999763 4433222111 000 0112588999999995 999962
Q ss_pred -----------CCCEEEEEcCCCc---EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCe-EEEEECCCCeEEEE
Q 013321 100 -----------MNMAIRKISDTGV---TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREI 164 (445)
Q Consensus 100 -----------~N~rIrkfd~dGv---~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~-LyVaD~gn~rIr~i 164 (445)
.++.|.++|.... ..+..+ ..|.+++ .+++|. ||++ ++.|+.+
T Consensus 102 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~------------------~~~~~~~-~s~dg~~l~~~---~~~i~~~ 159 (337)
T 1pby_B 102 PVRLELTHFEVQPTRVALYDAETLSRRKAFEAP------------------RQITMLA-WARDGSKLYGL---GRDLHVM 159 (337)
T ss_dssp EEEECSSCEEECCCEEEEEETTTTEEEEEEECC------------------SSCCCEE-ECTTSSCEEEE---SSSEEEE
T ss_pred ccccccccccccCceEEEEECCCCcEEEEEeCC------------------CCcceeE-ECCCCCEEEEe---CCeEEEE
Confidence 3588999996542 222111 1245555 455554 7776 3677777
Q ss_pred ECCCC
Q 013321 165 QLHDD 169 (445)
Q Consensus 165 ~l~~~ 169 (445)
++...
T Consensus 160 d~~~~ 164 (337)
T 1pby_B 160 DPEAG 164 (337)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 76653
No 101
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.27 E-value=0.0059 Score=57.36 Aligned_cols=77 Identities=17% Similarity=0.235 Sum_probs=53.7
Q ss_pred CceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC
Q 013321 22 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 99 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 99 (445)
.|.+++++++|. +|+++..++.|.+++..+ ++.......... . ...-..|.+++++++|. ||+++.
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t---~~~~~~~~~~~~-~--------~~~~~~~~~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT---CKNTFHANLSSV-P--------GEVGRSMYSFAISPDGKEVYATVN 111 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEESCCS-T--------TEEEECSSCEEECTTSSEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCC---CcEEEEEEcccc-c--------ccccccccceEECCCCCEEEEEcc
Confidence 589999999986 899998899999999863 444322221100 0 00123588999999997 888874
Q ss_pred C-----------CCEEEEEcCC
Q 013321 100 M-----------NMAIRKISDT 110 (445)
Q Consensus 100 ~-----------N~rIrkfd~d 110 (445)
. ++.|.++|..
T Consensus 112 ~~~~~~~~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 112 PTQRLNDHYVVKPPRLEVFSTA 133 (349)
T ss_dssp EEEECSSCEEECCCEEEEEEGG
T ss_pred cccccccccccCCCeEEEEECC
Confidence 4 5789998843
No 102
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.26 E-value=0.01 Score=62.36 Aligned_cols=142 Identities=10% Similarity=-0.032 Sum_probs=86.0
Q ss_pred CceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC----CCC-EE
Q 013321 22 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD----RGN-IY 95 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~----dG~-LY 95 (445)
.|++++++|+|. ||+++.. +.|.+++.+.. .+++....-. -..|.+|++++ +|. ||
T Consensus 180 ~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~-t~~~~~~i~~----------------g~~p~~va~sp~~~~dg~~l~ 241 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRD-ARIDMIDLWAK-EPTKVAEIKI----------------GIEARSVESSKFKGYEDRYTI 241 (543)
T ss_dssp TEEEEEECTTSCEEEEEETT-SEEEEEETTSS-SCEEEEEEEC----------------CSEEEEEEECCSTTCTTTEEE
T ss_pred ccceEEECCCCCEEEEECCC-CeEEEEECcCC-CCcEEEEEec----------------CCCcceEEeCCCcCCCCCEEE
Confidence 489999999986 7888866 89999998310 1332211111 12589999999 887 89
Q ss_pred EEeCCCCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCcee
Q 013321 96 IADTMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 172 (445)
Q Consensus 96 VAD~~N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~ 172 (445)
|++...+.|..+|... +.++...... .++.. -..-..+.+|++......+||+....++|+.++.....+.
T Consensus 242 v~~~~~~~v~v~D~~t~~~~~~i~~~g~~-----~~~~~-~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l 315 (543)
T 1nir_A 242 AGAYWPPQFAIMDGETLEPKQIVSTRGMT-----VDTQT-YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL 315 (543)
T ss_dssp EEEEESSEEEEEETTTCCEEEEEECCEEC-----SSSCC-EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC
T ss_pred EEEccCCeEEEEeccccccceeecccCcc-----cCccc-cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc
Confidence 9998888999999543 3344321100 00000 0001245566654445688889899999999997653221
Q ss_pred ---ecCCCCccceEEEEe
Q 013321 173 ---DNYDDTFHLGIFVLV 187 (445)
Q Consensus 173 ---~~~~~g~P~gIav~~ 187 (445)
.......|.++++..
T Consensus 316 ~~~~i~~~~~~~~~~~sp 333 (543)
T 1nir_A 316 TVTSIGAAPFLHDGGWDS 333 (543)
T ss_dssp EEEEEECCSSCCCEEECT
T ss_pred eeEEeccCcCccCceECC
Confidence 122233455555543
No 103
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.25 E-value=0.0072 Score=60.56 Aligned_cols=79 Identities=13% Similarity=0.040 Sum_probs=52.4
Q ss_pred CCCceEEEEcCCCc-EEEEeC---------CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEc
Q 013321 20 GMEPFSVAVSPSGE-LLVLDS---------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD 89 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs---------~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD 89 (445)
+..| +|+++|||. |||++. ..+.|.+|+... .++...+-.+ +. + .......|.+++++
T Consensus 66 g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t---~~~~~~i~~~-~~-----~--~~~~g~~p~~~~~s 133 (373)
T 2mad_H 66 GFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT---FLPIADIELP-DA-----P--RFDVGPYSWMNANT 133 (373)
T ss_pred CCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC---CcEEEEEECC-Cc-----c--ccccCCCccceEEC
Confidence 3568 999999986 999985 246788998752 2221111110 00 0 00012479999999
Q ss_pred CCCC-EEEEeCC-CCEEEEEcCCC
Q 013321 90 DRGN-IYIADTM-NMAIRKISDTG 111 (445)
Q Consensus 90 ~dG~-LYVAD~~-N~rIrkfd~dG 111 (445)
++|. |||+... .+.|.+|| ..
T Consensus 134 pDG~~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 134 PNNADLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred CCCCEEEEEecCCCCeEEEEE-CC
Confidence 9998 9999875 68899999 65
No 104
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.23 E-value=0.0037 Score=61.00 Aligned_cols=133 Identities=16% Similarity=0.115 Sum_probs=77.1
Q ss_pred CCCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccE----EEecCCCCcccCCCCCccCccCCCcceEE-EcCCCC
Q 013321 20 GMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPK----LVAGSPEGYYGHVDGRPRGARMNHPKGLA-VDDRGN 93 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~----~vaG~~~G~~G~~dG~~~~a~Ln~P~GIa-vD~dG~ 93 (445)
+..|.+++++|+|. ||+++..++.|..++.+.. .|++. .+...+.+..|.. +... ....|.+|+ ++++|.
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~g~~-~~~~--~~~~~~~i~~~spdG~ 267 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA-THMPVYTHHSFPLIPPGIPDRD-PETG--KGLYRADVCALTFSGK 267 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEEESSCTTCCCBC-TTTS--SBSEEEEEEEECTTSS
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC-CCcEEEccceEEcCCCCcCCcc-cccc--cccccccEEEECCCCC
Confidence 45799999999995 8899887888877754311 14432 1222221111110 0000 122588999 999997
Q ss_pred -EEEEeCCCC-----EEEEEc--CCCc-EEEecCcccCCCCCCCCCccCcccCCCceEEEEC---CCCeEEEEECCCCeE
Q 013321 94 -IYIADTMNM-----AIRKIS--DTGV-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVG---SSCSLLVIDRGNQAI 161 (445)
Q Consensus 94 -LYVAD~~N~-----rIrkfd--~dGv-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd---~dG~LyVaD~gn~rI 161 (445)
|||++...+ +|.+++ .+|. ..+...... .-..|.++++.+ +...||+++..++.|
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-------------~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT-------------PTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-------------SSCCTTCCCEEECTTCTTEEEEECSSSCEE
T ss_pred EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-------------CCCCcccceecCCCcCCCEEEEEEcCCCeE
Confidence 899987655 888776 3453 221100000 001244454433 345789998888888
Q ss_pred EEEECCCC
Q 013321 162 REIQLHDD 169 (445)
Q Consensus 162 r~i~l~~~ 169 (445)
..++.+..
T Consensus 335 ~v~~~~~~ 342 (365)
T 1jof_A 335 EIYRWKDE 342 (365)
T ss_dssp EEEEEETT
T ss_pred EEEEEchh
Confidence 88877654
No 105
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.18 E-value=0.0097 Score=62.08 Aligned_cols=160 Identities=13% Similarity=0.078 Sum_probs=93.8
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcCCCc--EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCc
Q 013321 6 GGYTVETVFEGSKFGMEPFSVAVSPSGE--LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHP 83 (445)
Q Consensus 6 ~G~~v~tv~~Gs~~g~~P~gIAVdpdG~--LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P 83 (445)
.|+.+++++++ ...|.+|++.|+|. |||++. .++|++++.++... ...+++.+.-. ..|. .......+
T Consensus 2 ~gf~v~~va~g---L~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~--~~~~~~~~~~~---~~g~-~~~~e~Gl 71 (463)
T 2wg3_C 2 NCFCIQEVVSG---LRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIF--KEPYLDIHKLV---QSGI-KGGDERGL 71 (463)
T ss_dssp CCEEEEEEEEE---ESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBC--SSCSEECTTTB---CCCC-SSSCCCSE
T ss_pred CceEEEEeccC---CCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCee--eeeecCCccee---ccCc-cccCCCcc
Confidence 47888888874 35799999999985 999996 68999998764311 11122221000 0000 00012356
Q ss_pred ceEEEcCC----CCEEEEeCCC------------CEEEEEcCC----C------cEEEecCcccCCCCCCCCCccCcccC
Q 013321 84 KGLAVDDR----GNIYIADTMN------------MAIRKISDT----G------VTTIAGGKWSRGVGHVDGPSEDAKFS 137 (445)
Q Consensus 84 ~GIavD~d----G~LYVAD~~N------------~rIrkfd~d----G------v~tiaGg~~G~g~G~~dgp~~~a~f~ 137 (445)
.|||++++ |.|||+-+.. .+|.++..+ . ..+|..... ...--
T Consensus 72 lgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~------------~~~~H 139 (463)
T 2wg3_C 72 LSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAE------------LHRKH 139 (463)
T ss_dssp EEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEE------------SSSSS
T ss_pred eeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCC------------CCCcc
Confidence 79999985 8899985421 477777621 1 122211100 00111
Q ss_pred CCceEEEECCCCeEEEEEC--C---------------CCeEEEEECCCCc---------------------eeecCCCCc
Q 013321 138 NDFDVVYVGSSCSLLVIDR--G---------------NQAIREIQLHDDD---------------------CSDNYDDTF 179 (445)
Q Consensus 138 ~P~gI~~vd~dG~LyVaD~--g---------------n~rIr~i~l~~~~---------------------~~~~~~~g~ 179 (445)
....|+ .+++|.|||+-- + .++|.+|++++.. ..+..+.-.
T Consensus 140 ~g~~l~-fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN 218 (463)
T 2wg3_C 140 LGGQLL-FGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD 218 (463)
T ss_dssp CEEEEE-ECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS
T ss_pred cCCcEe-ECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC
Confidence 234455 689999999832 2 3679999998831 122333446
Q ss_pred cceEEEEec
Q 013321 180 HLGIFVLVA 188 (445)
Q Consensus 180 P~gIav~~~ 188 (445)
|.++++...
T Consensus 219 p~gla~dp~ 227 (463)
T 2wg3_C 219 PGRCAVDRH 227 (463)
T ss_dssp CCBEEEESS
T ss_pred cceEEECCC
Confidence 888888865
No 106
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.16 E-value=0.0093 Score=58.33 Aligned_cols=109 Identities=13% Similarity=0.093 Sum_probs=76.6
Q ss_pred CceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC
Q 013321 22 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 99 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 99 (445)
.|.+++++++|. ||++...++.|..++... +++...... ...|.+++++++|. ||+++.
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---KKVQKSIPV----------------FDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTT---TEEEEEEEC----------------SSSEEEEEECTTSSEEEEEEC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCC---CcEEEEecC----------------CCCCCeEEEcCCCCEEEEEec
Confidence 688999999885 899999999999999873 333332221 12578999999997 888887
Q ss_pred CC--------------CEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeE
Q 013321 100 MN--------------MAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAI 161 (445)
Q Consensus 100 ~N--------------~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rI 161 (445)
.+ +.|+.+|.. + +.++.+ -..|.++++ .++| .|++++..++.|
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~------------------~~~~~~~~~-s~dg~~l~~~~~~d~~i 425 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA------------------GNQPTGLDV-SPDNRYLVISDFLDHQI 425 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC------------------SSSEEEEEE-CTTSCEEEEEETTTTEE
T ss_pred CCCccccccccccccceEEEEEECCCCcEEEEecC------------------CCCCceEEE-cCCCCEEEEEECCCCeE
Confidence 64 389999964 4 222211 113566664 5666 567777778999
Q ss_pred EEEECCC
Q 013321 162 REIQLHD 168 (445)
Q Consensus 162 r~i~l~~ 168 (445)
+.+++++
T Consensus 426 ~v~~~~~ 432 (433)
T 3bws_A 426 RVYRRDG 432 (433)
T ss_dssp EEEEETT
T ss_pred EEEEecC
Confidence 9998653
No 107
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.08 E-value=0.0042 Score=64.23 Aligned_cols=78 Identities=9% Similarity=-0.010 Sum_probs=55.4
Q ss_pred CCCceEEEEcCCCc-EEEEeC---------CCCeEEEEeCCCCCCCccE-EE-ecCCCCcccCCCCCccCccCCCcceEE
Q 013321 20 GMEPFSVAVSPSGE-LLVLDS---------ENSNIYKISTSLSPYSRPK-LV-AGSPEGYYGHVDGRPRGARMNHPKGLA 87 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs---------~n~rI~kid~dg~~~G~v~-~v-aG~~~G~~G~~dG~~~~a~Ln~P~GIa 87 (445)
+..| +|+++|||. |||++. .++.|.+||... +++. .+ .+.. +. ......|.+++
T Consensus 118 G~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t---~~vv~~I~v~g~-~r---------~~~g~~P~~~~ 183 (426)
T 3c75_H 118 GFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT---FLPIADIELPDA-PR---------FLVGTYQWMNA 183 (426)
T ss_dssp CSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT---CCEEEEEEETTC-CC---------CCBSCCGGGSE
T ss_pred CCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC---CcEEEEEECCCc-cc---------cccCCCcceEE
Confidence 4679 999999886 999986 356799999863 3332 22 2211 00 00125799999
Q ss_pred EcCCCC-EEEEeCC-CCEEEEEcCCC
Q 013321 88 VDDRGN-IYIADTM-NMAIRKISDTG 111 (445)
Q Consensus 88 vD~dG~-LYVAD~~-N~rIrkfd~dG 111 (445)
+++||. |||++.. .+.|.+||...
T Consensus 184 ~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 184 LTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred EcCCCCEEEEEecCCCCeEEEEECCC
Confidence 999997 9999975 78999999655
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.07 E-value=0.0096 Score=58.23 Aligned_cols=136 Identities=9% Similarity=0.058 Sum_probs=87.3
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
..|.++++++++.++++...++.|..++... ++........ ...+ ......++++.++|.+|++...
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~-~~~~---------~~~~v~~~~~~~~~~~~~s~~~ 189 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINS---GQTVRLSPPE-KYKK---------KLGFVETISIPEHNELWVSQMQ 189 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTT---CCEEEECCCH-HHHT---------TCCEEEEEEEGGGTEEEEEEGG
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCC---CeEeeecCcc-cccc---------cCCceeEEEEcCCCEEEEEECC
Confidence 4578899999888999988888999999873 4443322110 0011 1224568999999999999999
Q ss_pred CCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-cCC
Q 013321 101 NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYD 176 (445)
Q Consensus 101 N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~-~~~ 176 (445)
.+.|+.+|.+. +.++.. .-..+.++++......||++...++.|+.+++....+.. ...
T Consensus 190 d~~v~~~d~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 252 (433)
T 3bws_A 190 ANAVHVFDLKTLAYKATVDL-----------------TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK 252 (433)
T ss_dssp GTEEEEEETTTCCEEEEEEC-----------------SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC
T ss_pred CCEEEEEECCCceEEEEEcC-----------------CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC
Confidence 99999999554 222221 012356666544444677888888999999987654433 222
Q ss_pred CCccceEEEE
Q 013321 177 DTFHLGIFVL 186 (445)
Q Consensus 177 ~g~P~gIav~ 186 (445)
.+.+.++++.
T Consensus 253 ~~~~~~~~~~ 262 (433)
T 3bws_A 253 IGLPRGLLLS 262 (433)
T ss_dssp CSEEEEEEEC
T ss_pred CCCceEEEEc
Confidence 2334444443
No 109
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.92 E-value=0.039 Score=55.17 Aligned_cols=48 Identities=10% Similarity=0.068 Sum_probs=32.0
Q ss_pred CCceEEEECCCCe--EEEEECCCCeEEEEECCCCceeec-C-CCCccceEEEE
Q 013321 138 NDFDVVYVGSSCS--LLVIDRGNQAIREIQLHDDDCSDN-Y-DDTFHLGIFVL 186 (445)
Q Consensus 138 ~P~gI~~vd~dG~--LyVaD~gn~rIr~i~l~~~~~~~~-~-~~g~P~gIav~ 186 (445)
.|++|. ++++|. +|++..+.+.|..|+......... . -...|.+|...
T Consensus 319 ~p~~i~-~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~~~~ 370 (373)
T 2mad_H 319 DVDAIS-VAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVM 370 (373)
T ss_pred CcCeEE-ECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEEEEc
Confidence 478886 577775 777777889999999877554432 2 23456666543
No 110
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.87 E-value=0.0082 Score=61.41 Aligned_cols=113 Identities=16% Similarity=0.141 Sum_probs=73.3
Q ss_pred cCCC-cEEEEeCC----CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeCC--
Q 013321 29 SPSG-ELLVLDSE----NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM-- 100 (445)
Q Consensus 29 dpdG-~LYVaDs~----n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~-- 100 (445)
.|+| .|||+|.. .++|.+||... +++...+-. | ..|. |+++++|. |||+++.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t---~~v~~~I~v-----G-----------~~P~-va~spDG~~lyVan~~~~ 100 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEA---GRVIGMIDG-----G-----------FLPN-PVVADDGSFIAHASTVFS 100 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTT---TEEEEEEEE-----C-----------SSCE-EEECTTSSCEEEEEEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCC---CeEEEEEEC-----C-----------CCCc-EEECCCCCEEEEEccccc
Confidence 4565 49999986 68999999863 333322211 1 1475 99999998 9999852
Q ss_pred -------CCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECC-CCeEEEEECCC
Q 013321 101 -------NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRG-NQAIREIQLHD 168 (445)
Q Consensus 101 -------N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~g-n~rIr~i~l~~ 168 (445)
.+.|.+||... +.++.-+. |. . ...-..|.+++ ++++| .|||++.. .+.|..|++..
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~-----g~----r-~~~g~~P~~~a-~spDGk~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTADIELPD-----AP----R-FLVGTYPWMTS-LTPDGKTLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETT-----CC----C-CCBSCCGGGEE-ECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCC-----cc----c-cccCCCCceEE-EcCCCCEEEEEEcCCCCeEEEEECCC
Confidence 45699999765 23332111 00 0 00123688887 46666 78999974 78999999887
Q ss_pred Ccee
Q 013321 169 DDCS 172 (445)
Q Consensus 169 ~~~~ 172 (445)
....
T Consensus 170 ~~vv 173 (386)
T 3sjl_D 170 KAFK 173 (386)
T ss_dssp TEEE
T ss_pred CcEE
Confidence 5443
No 111
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.73 E-value=0.01 Score=61.33 Aligned_cols=108 Identities=13% Similarity=0.093 Sum_probs=71.5
Q ss_pred cEEEEeCCC----CeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC--------
Q 013321 33 ELLVLDSEN----SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT-------- 99 (445)
Q Consensus 33 ~LYVaDs~n----~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~-------- 99 (445)
.+||++... +.|.+||... +++...+-. | ..| +|++++||. |||++.
T Consensus 86 ~vyV~n~~~~~~~~~VsVID~~t---~~vv~~I~v-----G-----------~~P-gia~SpDgk~lyVan~~~~~~~~G 145 (426)
T 3c75_H 86 RVYIQDPAHFAAITQQFVIDGST---GRILGMTDG-----G-----------FLP-HPVAAEDGSFFAQASTVFERIARG 145 (426)
T ss_dssp EEEEEECTTTCSSEEEEEEETTT---TEEEEEEEE-----C-----------SSC-EEEECTTSSCEEEEEEEEEETTEE
T ss_pred EEEEECCCcCCCCCeEEEEECCC---CEEEEEEEC-----C-----------CCC-ceEECCCCCEEEEEeccccccccC
Confidence 599999865 7999999863 333222111 1 258 999999998 999996
Q ss_pred -CCCEEEEEcCCC---cEEEecC-cccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECC-CCeEEEEECCCCcee
Q 013321 100 -MNMAIRKISDTG---VTTIAGG-KWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRG-NQAIREIQLHDDDCS 172 (445)
Q Consensus 100 -~N~rIrkfd~dG---v~tiaGg-~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~g-n~rIr~i~l~~~~~~ 172 (445)
..+.|.+||... +.++.-+ ... ......|.+++ ++++| .|||++.. .+.|.+|++......
T Consensus 146 ~~~~~VsviD~~t~~vv~~I~v~g~~r-----------~~~g~~P~~~~-~spDGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 146 KRTDYVEVFDPVTFLPIADIELPDAPR-----------FLVGTYQWMNA-LTPDNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEEEEEECTTTCCEEEEEEETTCCC-----------CCBSCCGGGSE-ECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CCCCEEEEEECCCCcEEEEEECCCccc-----------cccCCCcceEE-EcCCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 356799999654 2333211 100 00113577877 46665 89999875 789999998875443
No 112
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.70 E-value=0.011 Score=63.62 Aligned_cols=98 Identities=22% Similarity=0.264 Sum_probs=62.7
Q ss_pred CCCceEEEEcC-CCcEEEEeCCC---------------------CeEEEEeCCCCC------CCccEEEecCCCCccc--
Q 013321 20 GMEPFSVAVSP-SGELLVLDSEN---------------------SNIYKISTSLSP------YSRPKLVAGSPEGYYG-- 69 (445)
Q Consensus 20 g~~P~gIAVdp-dG~LYVaDs~n---------------------~rI~kid~dg~~------~G~v~~vaG~~~G~~G-- 69 (445)
+..|.+|+++| +|+|||+-+.+ +.|+++.++... ...+.+++|.+....+
T Consensus 383 f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~ 462 (592)
T 3zwu_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred EeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccc
Confidence 36799999998 89999997743 579999764321 1123455555421111
Q ss_pred --CCCCCccCccCCCcceEEEcCCCCEEEEe-C-----------CCCEEEEEcCC-C-cEEEec
Q 013321 70 --HVDGRPRGARMNHPKGLAVDDRGNIYIAD-T-----------MNMAIRKISDT-G-VTTIAG 117 (445)
Q Consensus 70 --~~dG~~~~a~Ln~P~GIavD~dG~LYVAD-~-----------~N~rIrkfd~d-G-v~tiaG 117 (445)
..........|+.|.+|+||+.|+|||+. . +|+.+..++.. | +..++.
T Consensus 463 ~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~ 526 (592)
T 3zwu_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV 526 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE
T ss_pred cccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe
Confidence 11112234569999999999999999974 3 35677777754 4 455443
No 113
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.66 E-value=0.0089 Score=62.86 Aligned_cols=106 Identities=10% Similarity=-0.025 Sum_probs=74.9
Q ss_pred EEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeCCCCEEE
Q 013321 27 AVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIR 105 (445)
Q Consensus 27 AVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~N~rIr 105 (445)
+++++|.+||+....+.|..++... +++...... | . .|++++++++|. |||++.. +.|+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t---~~~~~~i~~-----g----------~-~~~~v~~spdg~~l~v~~~d-~~V~ 203 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDS---KKIVKVIDT-----G----------Y-AVHISRMSASGRYLLVIGRD-ARID 203 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTT---CCEEEEEEC-----S----------T-TEEEEEECTTSCEEEEEETT-SEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCC---ceEEEEEec-----C----------c-ccceEEECCCCCEEEEECCC-CeEE
Confidence 4788899999999999999998763 444332211 1 1 278999999997 9999987 8999
Q ss_pred EEcC--C-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECC----CC-eEEEEECCCCeEEEEECCCCce
Q 013321 106 KISD--T-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS----SC-SLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 106 kfd~--d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~----dG-~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
++|. . + +.++..+ ..|.++++ ++ +| .|||++...+.|..++.....+
T Consensus 204 v~D~~~~t~~~~~~i~~g------------------~~p~~va~-sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 204 MIDLWAKEPTKVAEIKIG------------------IEARSVES-SKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp EEETTSSSCEEEEEEECC------------------SEEEEEEE-CCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred EEECcCCCCcEEEEEecC------------------CCcceEEe-CCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 9997 3 3 2222211 24677764 55 55 7888887788899998765443
No 114
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.65 E-value=0.0063 Score=61.55 Aligned_cols=82 Identities=5% Similarity=-0.117 Sum_probs=56.6
Q ss_pred CCCceEEEEcCCCc-EEEEeC---------CCCeEEEEeCCCCCCCccE-EE-ecCCCCcccCCCCCccCccCCCcceEE
Q 013321 20 GMEPFSVAVSPSGE-LLVLDS---------ENSNIYKISTSLSPYSRPK-LV-AGSPEGYYGHVDGRPRGARMNHPKGLA 87 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs---------~n~rI~kid~dg~~~G~v~-~v-aG~~~G~~G~~dG~~~~a~Ln~P~GIa 87 (445)
+..| +|+++|||. |||+++ ..+.|.+||... +++. .+ .+.... .-....|.+|+
T Consensus 65 G~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T---~~vv~~I~v~~~~~----------~~~g~~P~~ia 130 (368)
T 1mda_H 65 AFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT---FLPIADIELPDAPR----------FSVGPRVHIIG 130 (368)
T ss_dssp CTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT---CCEEEEEEETTSCS----------CCBSCCTTSEE
T ss_pred CCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC---CCEEEEEECCCccc----------cccCCCcceEE
Confidence 3569 999999875 999984 367899999874 3332 22 221100 00135799999
Q ss_pred EcCCCC-EEEEeCC-CCEEEE--EcCCCcEEE
Q 013321 88 VDDRGN-IYIADTM-NMAIRK--ISDTGVTTI 115 (445)
Q Consensus 88 vD~dG~-LYVAD~~-N~rIrk--fd~dGv~ti 115 (445)
+++||. |||++.. .+.|.+ ||...+.++
T Consensus 131 ~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i 162 (368)
T 1mda_H 131 NCASSACLLFFLFGSSAAAGLSVPGASDDQLT 162 (368)
T ss_dssp ECTTSSCEEEEECSSSCEEEEEETTTEEEEEE
T ss_pred EcCCCCEEEEEccCCCCeEEEEEEchhhceEE
Confidence 999996 9999976 678888 886544444
No 115
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.56 E-value=0.045 Score=58.29 Aligned_cols=73 Identities=11% Similarity=0.114 Sum_probs=53.0
Q ss_pred CCCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccCCCcceEEEc----CCCC
Q 013321 20 GMEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVD----DRGN 93 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD----~dG~ 93 (445)
+..|++++++|||. |||++ ..+.|.+|+.... .+++. .+.. | ..|.+|+++ ++|.
T Consensus 196 g~~p~~v~~SpDGr~lyv~~-~dg~V~viD~~~~-t~~~v~~i~~------G-----------~~P~~ia~s~~~~pDGk 256 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIG-RDGKVNMIDLWMK-EPTTVAEIKI------G-----------SEARSIETSKMEGWEDK 256 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSS-SCCEEEEEEC------C-----------SEEEEEEECCSTTCTTT
T ss_pred CCCccceEECCCCCEEEEEc-CCCeEEEEECCCC-CCcEeEEEec------C-----------CCCceeEEccccCCCCC
Confidence 45799999999987 78887 4679999997310 02221 1110 1 258999999 5886
Q ss_pred -EEEEeCCCCEEEEEcCCC
Q 013321 94 -IYIADTMNMAIRKISDTG 111 (445)
Q Consensus 94 -LYVAD~~N~rIrkfd~dG 111 (445)
|||++...+.|.+||...
T Consensus 257 ~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 257 YAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EEEEEEEETTEEEEEETTT
T ss_pred EEEEEEccCCeEEEEECCC
Confidence 999999999999999544
No 116
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.55 E-value=0.029 Score=57.34 Aligned_cols=116 Identities=11% Similarity=0.015 Sum_probs=71.6
Q ss_pred CCCceEEEEcCCCc-EEEEeC---------CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEc
Q 013321 20 GMEPFSVAVSPSGE-LLVLDS---------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD 89 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs---------~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD 89 (445)
+..|. |+++|||. |||++. ..+.|.+||..+ .++...+-.+.|... ..-..|.+++++
T Consensus 78 G~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t---~~v~~~I~v~~g~r~--------~~g~~P~~~a~s 145 (386)
T 3sjl_D 78 GFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT---LLPTADIELPDAPRF--------LVGTYPWMTSLT 145 (386)
T ss_dssp CSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT---CCEEEEEEETTCCCC--------CBSCCGGGEEEC
T ss_pred CCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC---CeEEEEEECCCcccc--------ccCCCCceEEEc
Confidence 45686 99999987 999985 246799999874 333221111101100 012489999999
Q ss_pred CCCC-EEEEeCC-CCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCce---EEEECCCCeEEEEECCC-Ce
Q 013321 90 DRGN-IYIADTM-NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFD---VVYVGSSCSLLVIDRGN-QA 160 (445)
Q Consensus 90 ~dG~-LYVAD~~-N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~g---I~~vd~dG~LyVaD~gn-~r 160 (445)
+||. |||++.. .+.|.+||... +.++.-. |+ ....|.+ ++.+..+|.+++++... ++
T Consensus 146 pDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~------g~--------~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~ 211 (386)
T 3sjl_D 146 PDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP------DC--------YHIFPTAPDTFFMHCRDGSLAKVAFGTEGT 211 (386)
T ss_dssp TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC------SE--------EEEEEEETTEEEEEETTSCEEEEECCSSSC
T ss_pred CCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC------Cc--------ceeecCCCceeEEECCCCCEEEEECCCCCe
Confidence 9998 9999975 78999999655 3344211 10 0012322 23456788888888764 56
Q ss_pred E
Q 013321 161 I 161 (445)
Q Consensus 161 I 161 (445)
+
T Consensus 212 v 212 (386)
T 3sjl_D 212 P 212 (386)
T ss_dssp C
T ss_pred E
Confidence 5
No 117
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.52 E-value=0.03 Score=58.62 Aligned_cols=155 Identities=9% Similarity=0.003 Sum_probs=84.1
Q ss_pred cCCcEEEEEecCCCCCCCceEEEE--cCCCc-EEEEeC-----CCCeEEEEeCCCCCCCccE--EEecCCCCcccCCCCC
Q 013321 5 EGGYTVETVFEGSKFGMEPFSVAV--SPSGE-LLVLDS-----ENSNIYKISTSLSPYSRPK--LVAGSPEGYYGHVDGR 74 (445)
Q Consensus 5 e~G~~v~tv~~Gs~~g~~P~gIAV--dpdG~-LYVaDs-----~n~rI~kid~dg~~~G~v~--~vaG~~~G~~G~~dG~ 74 (445)
..+..+.++--|.. +..|..|++ +|+|. +||+.. .++.|.++..+. |... .++..+... ..+.
T Consensus 236 ~~~k~~~tI~vg~~-g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~---g~~~~~~vIdi~~~~---v~~~ 308 (462)
T 2ece_A 236 RKRKRIHSLTLGEE-NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED---GKWNAEKVIEIPAEP---LEGN 308 (462)
T ss_dssp TTTEEEEEEESCTT-EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET---TEEEEEEEEEECCEE---CCSS
T ss_pred CCCcEeeEEecCCC-CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC---CceeEEEEEeCCCcc---cccc
Confidence 33444444443322 356888877 88876 899887 788888776552 3221 111111000 0000
Q ss_pred ccC------ccCCCcceEEEcCCCC-EEEEeCCCCEEEEEcCC--C-cEEEecCcccCCCCCCCCCccCcccCCCceEEE
Q 013321 75 PRG------ARMNHPKGLAVDDRGN-IYIADTMNMAIRKISDT--G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVY 144 (445)
Q Consensus 75 ~~~------a~Ln~P~GIavD~dG~-LYVAD~~N~rIrkfd~d--G-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~ 144 (445)
+.. +.-+.|.+|.+++||. |||++++.+.|.+||-. + ...+.--..|-.....+.+.....-..|.++.
T Consensus 309 lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~- 387 (462)
T 2ece_A 309 LPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLE- 387 (462)
T ss_dssp CCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEE-
T ss_pred ccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEE-
Confidence 000 0024699999999998 99999999999999842 2 22221111100000011111111123688887
Q ss_pred ECCCC-eEEEEE--------C-----CCCeEEEEECC
Q 013321 145 VGSSC-SLLVID--------R-----GNQAIREIQLH 167 (445)
Q Consensus 145 vd~dG-~LyVaD--------~-----gn~rIr~i~l~ 167 (445)
++++| .|||++ . .+..+.+++.+
T Consensus 388 lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd 424 (462)
T 2ece_A 388 ISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNAN 424 (462)
T ss_dssp ECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEEC
T ss_pred EcCCCCEEEEEcCCcccccccccCCCCceEEEEEEec
Confidence 56666 799998 2 45667666544
No 118
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.49 E-value=0.039 Score=52.88 Aligned_cols=112 Identities=20% Similarity=0.234 Sum_probs=68.7
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCC----CCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEE
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSP----YSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 97 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~----~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVA 97 (445)
+-..||++|+|.||++ .++.++++++.... .+. .+.+|.. |..+ | ..|.+|++|+||++
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~-Gw~~----------F---~a~~fD~~G~LYav 104 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNG-GWNQ----------F---QFLFFDPNGYLYAV 104 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECS-CGGG----------C---SEEEECTTSCEEEE
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-ccEeccc-cccc----------c---eEEEECCCCCEEEe
Confidence 4569999999999999 57789999975211 111 2333321 1111 1 38999999999999
Q ss_pred eCCCCEEEEEcC--CCcEEEec--CcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEEC
Q 013321 98 DTMNMAIRKISD--TGVTTIAG--GKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL 166 (445)
Q Consensus 98 D~~N~rIrkfd~--dGv~tiaG--g~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l 166 (445)
.+.+|.|+++ ++-.++++ .+.|. +|+. -...++.+++|.||.++ ++++++-..
T Consensus 105 --~dG~iyr~~pP~~~~~~Wl~~a~~vg~-~gw~-----------~~~~lff~p~G~Lyav~--dg~lyr~~~ 161 (236)
T 1tl2_A 105 --SKDKLYKASPPQSDTDNWIARATEVGS-GGWS-----------GFKFLFFHPNGYLYAVH--GQQFYKALP 161 (236)
T ss_dssp --ETTEEEEESCCCSTTCCHHHHSEEEEC-SSGG-----------GEEEEEECTTSCEEEEE--TTEEEEECC
T ss_pred --CCCEEEEeCCCcCCCCceeccccEecc-CCCC-----------ceEEEEECCCceEEEEe--CCcEEecCC
Confidence 3589999995 44211111 11111 1111 11334689999999999 455765443
No 119
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.42 E-value=0.0073 Score=64.97 Aligned_cols=61 Identities=11% Similarity=0.216 Sum_probs=49.2
Q ss_pred CCCceEEEEcCCCcEEE-EeCC-----------CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEE
Q 013321 20 GMEPFSVAVSPSGELLV-LDSE-----------NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLA 87 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYV-aDs~-----------n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIa 87 (445)
++.|.+|+|+++|+||| +|.. ++.|++++++. |++..++..+. +..|+||+
T Consensus 475 fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t---Gel~~fl~~P~--------------~aEpnGia 537 (592)
T 4a9v_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT---GEIRRFMVGPI--------------GCEVTGIS 537 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTT---CCEEEEEECCT--------------TCEEEEEE
T ss_pred cCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCC---CeEEEEEeCCC--------------CccccCCE
Confidence 48899999999999999 8863 56899998863 77777765431 34789999
Q ss_pred EcCCCC-EEEE
Q 013321 88 VDDRGN-IYIA 97 (445)
Q Consensus 88 vD~dG~-LYVA 97 (445)
+.+|+. |||+
T Consensus 538 fSPD~ktLfV~ 548 (592)
T 4a9v_A 538 FSPDQKTLFVG 548 (592)
T ss_dssp ECTTSSEEEEE
T ss_pred ECCCCCEEEEE
Confidence 999987 8887
No 120
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.41 E-value=0.051 Score=53.52 Aligned_cols=30 Identities=7% Similarity=0.091 Sum_probs=25.0
Q ss_pred CCceEEEEcCCCc-EEEEeCC-CCeEEEEeCC
Q 013321 21 MEPFSVAVSPSGE-LLVLDSE-NSNIYKISTS 50 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~-n~rI~kid~d 50 (445)
..|.+|+++|||. |||++.. .+.|.+++..
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~ 139 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVA 139 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETT
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECC
Confidence 5799999999986 8999865 6788888765
No 121
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.38 E-value=0.034 Score=54.76 Aligned_cols=77 Identities=12% Similarity=0.125 Sum_probs=52.8
Q ss_pred CCceEEEEcCCCc-EEEEeC---------CCCeEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccCCCcceEEEc
Q 013321 21 MEPFSVAVSPSGE-LLVLDS---------ENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVD 89 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs---------~n~rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD 89 (445)
..| +|+++|||. |||++. ..+.|.+++... +++. .+.-.. +.. ..-..|.+|+++
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t---~~~~~~i~~~~-~~~---------~~g~~p~~i~~s 116 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK---LTFEKEISLPP-KRV---------QGLNYDGLFRQT 116 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT---CCEEEEEEECT-TBC---------CBCCCGGGEEEC
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC---CcEEEEEEcCc-ccc---------ccCCCcceEEEC
Confidence 568 999999986 899974 245699998752 2322 221110 000 012579999999
Q ss_pred CCCC-EEEEeCC-CCEEEEEcCCC
Q 013321 90 DRGN-IYIADTM-NMAIRKISDTG 111 (445)
Q Consensus 90 ~dG~-LYVAD~~-N~rIrkfd~dG 111 (445)
++|. |||+... .+.|.+||...
T Consensus 117 pdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 117 TDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp TTSSEEEEEEESSSEEEEEEETTT
T ss_pred CCCCEEEEECCCCCCeEEEEECCC
Confidence 9997 9999876 68899999654
No 122
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.24 E-value=0.0062 Score=65.72 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=56.2
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCC---CC----ccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCC
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSP---YS----RPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG 92 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~---~G----~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG 92 (445)
.+|+||+++|||. +||++...++|.+++..... .| +-..++-.. . =..|.+++++++|
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~---v-----------G~gP~h~aF~~dG 342 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE---L-----------GLGPLHTAFDGRG 342 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB---C-----------CSCEEEEEECTTS
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC---C-----------CCCcceEEECCCC
Confidence 6899999999997 89999999999999875210 00 000111111 0 1379999999999
Q ss_pred CEEEEeCCCCEEEEEcC
Q 013321 93 NIYIADTMNMAIRKISD 109 (445)
Q Consensus 93 ~LYVAD~~N~rIrkfd~ 109 (445)
++|++-...+.|.++|-
T Consensus 343 ~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 343 NAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp EEEEEETTTTEEEEEEH
T ss_pred eEEEEEecCCcEEEEEh
Confidence 99999999999999993
No 123
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.19 E-value=0.032 Score=56.36 Aligned_cols=106 Identities=9% Similarity=-0.110 Sum_probs=69.5
Q ss_pred CcEEEEeCCCC----eEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC-------
Q 013321 32 GELLVLDSENS----NIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT------- 99 (445)
Q Consensus 32 G~LYVaDs~n~----rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~------- 99 (445)
..+||++...+ +|..||.+. +++...+-. | ..| +|+++++|. |||++.
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t---~~v~~~i~v-----G-----------~~P-~i~~spDg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGC---GVTLGHSLG-----A-----------FLS-LAVAGHSGSDFALASTSFARSAK 91 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTT---TEEEEEEEE-----C-----------TTC-EEEECTTSSCEEEEEEEETTTTS
T ss_pred CeEEEECCccCCccceEEEEECCC---CeEEEEEeC-----C-----------CCC-ceEECCCCCEEEEEccccccccc
Confidence 57999999877 888999873 333221111 1 158 999999987 999984
Q ss_pred --CCCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECC-CCeEEE--EECCC
Q 013321 100 --MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRG-NQAIRE--IQLHD 168 (445)
Q Consensus 100 --~N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~g-n~rIr~--i~l~~ 168 (445)
..+.|.+||... +.++..+..+ .......|.+++ ++++| .|||++.+ ++.|.. |++..
T Consensus 92 G~~~~~VsviD~~T~~vv~~I~v~~~~----------~~~~g~~P~~ia-~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIADIELPDAP----------RFSVGPRVHIIG-NCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SSEEEEEEEECTTTCCEEEEEEETTSC----------SCCBSCCTTSEE-ECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCcc----------ccccCCCcceEE-EcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 367899999654 3444221000 001124688887 46666 89999975 677888 77654
No 124
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.01 E-value=0.054 Score=57.68 Aligned_cols=103 Identities=13% Similarity=-0.024 Sum_probs=71.5
Q ss_pred EcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeCCCCEEEE
Q 013321 28 VSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRK 106 (445)
Q Consensus 28 VdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~N~rIrk 106 (445)
+|+.+.+||+....+.|..||..+ +++...... | ..|++++++++|. |||++. .+.|.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t---~~v~~~i~~-----g-----------~~p~~v~~SpDGr~lyv~~~-dg~V~v 222 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGST---YEIKTVLDT-----G-----------YAVHISRLSASGRYLFVIGR-DGKVNM 222 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTT---CCEEEEEEC-----S-----------SCEEEEEECTTSCEEEEEET-TSEEEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCC---CeEEEEEeC-----C-----------CCccceEECCCCCEEEEEcC-CCeEEE
Confidence 445567999999999999999873 444332221 1 2588999999998 899985 568999
Q ss_pred EcCC---C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEEC----CCC-eEEEEECCCCeEEEEECCCC
Q 013321 107 ISDT---G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVG----SSC-SLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 107 fd~d---G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd----~dG-~LyVaD~gn~rIr~i~l~~~ 169 (445)
||.. + +..+..| ..|.++++ + ++| .|||++...+.|..|+....
T Consensus 223 iD~~~~t~~~v~~i~~G------------------~~P~~ia~-s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 223 IDLWMKEPTTVAEIKIG------------------SEARSIET-SKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp EETTSSSCCEEEEEECC------------------SEEEEEEE-CCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred EECCCCCCcEeEEEecC------------------CCCceeEE-ccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 9973 3 2222211 13667764 5 355 78999988899999886553
No 125
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.00 E-value=0.22 Score=46.09 Aligned_cols=125 Identities=10% Similarity=0.015 Sum_probs=71.9
Q ss_pred cEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeCCCCEEEEEcCC-
Q 013321 33 ELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISDT- 110 (445)
Q Consensus 33 ~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~N~rIrkfd~d- 110 (445)
+++|+...++.|..++... +++......+ + ....|.+++++++|. |||++...+.|.++|..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~---~~~~~~~~~~--------~-----~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 65 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK---MAVDKVITIA--------D-----AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65 (337)
T ss_dssp EEEEEEETTTEEEEEETTT---TEEEEEEECT--------T-----CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCC---CcEEEEEEcC--------C-----CCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC
Confidence 4566666777777777652 3332222110 0 001388999999995 89999988999999954
Q ss_pred Cc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEEC-----------CCCeEEEEECCCCceee-cC
Q 013321 111 GV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDR-----------GNQAIREIQLHDDDCSD-NY 175 (445)
Q Consensus 111 Gv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~-----------gn~rIr~i~l~~~~~~~-~~ 175 (445)
+. .++..+..+ ..-..|.+++ .+++| .||+++. .++.|+.+++....... ..
T Consensus 66 ~~~~~~~~~~~~~------------~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 66 GETLGRIDLSTPE------------ERVKSLFGAA-LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp CCEEEEEECCBTT------------EEEECTTCEE-ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE
T ss_pred CCeEeeEEcCCcc------------cccccccceE-ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe
Confidence 42 223221100 0012456666 46666 7888862 35889999987644322 22
Q ss_pred CCCccceEEEE
Q 013321 176 DDTFHLGIFVL 186 (445)
Q Consensus 176 ~~g~P~gIav~ 186 (445)
....+.++++.
T Consensus 133 ~~~~~~~~~~s 143 (337)
T 1pby_B 133 APRQITMLAWA 143 (337)
T ss_dssp CCSSCCCEEEC
T ss_pred CCCCcceeEEC
Confidence 22345555544
No 126
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.95 E-value=0.11 Score=54.49 Aligned_cols=30 Identities=13% Similarity=0.034 Sum_probs=24.9
Q ss_pred CCCceEEEECCCC-eEEEEECCCCeEEEEECC
Q 013321 137 SNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 137 ~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~ 167 (445)
..|.+|.+ +++| .|||++++.+.|..|+..
T Consensus 321 ~~pa~I~l-S~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 321 PLVTDIDI-SLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCCCCEEE-CTTSCEEEEEETTTTEEEEEECS
T ss_pred CceeEEEE-CCCCCEEEEEeCCCCEEEEEEec
Confidence 46889874 5555 899999999999999975
No 127
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.91 E-value=0.14 Score=47.94 Aligned_cols=67 Identities=10% Similarity=0.090 Sum_probs=41.5
Q ss_pred cceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEE
Q 013321 83 PKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIR 162 (445)
Q Consensus 83 P~GIavD~dG~LYVAD~~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr 162 (445)
...+++|.+|.|||+. +.|.++|.+|.......... ....+++ .+.+|.|||+.. ++.|.
T Consensus 179 ~~~~~~d~~g~l~v~t---~~l~~~d~~g~~~~~~~~~~---------------~~~~~~~-~~~~g~l~v~t~-~~gl~ 238 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS---DKVYAINPDGTEKWNFYAGY---------------WTVTRPA-ISEDGTIYVTSL-DGHLY 238 (330)
T ss_dssp CSCCEECTTCCEEEES---SSEEEECTTSCEEEEECCSS---------------CCCSCCE-ECTTSCEEEEET-TTEEE
T ss_pred eeeeEEcCCCEEEEEe---CEEEEECCCCcEEEEEccCC---------------cceeceE-ECCCCeEEEEcC-CCeEE
Confidence 3467888899999998 67999997774333211100 1123333 577778888765 45677
Q ss_pred EEECCCC
Q 013321 163 EIQLHDD 169 (445)
Q Consensus 163 ~i~l~~~ 169 (445)
+++..+.
T Consensus 239 ~~~~~g~ 245 (330)
T 3hxj_A 239 AINPDGT 245 (330)
T ss_dssp EECTTSC
T ss_pred EECCCCC
Confidence 7765443
No 128
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.85 E-value=0.054 Score=56.45 Aligned_cols=122 Identities=16% Similarity=0.164 Sum_probs=69.1
Q ss_pred CCceEEEEcCC----CcEEEEeCCC------------CeEEEEeCCCC---C--CCccEEEecCCCCcccCCCCCccCcc
Q 013321 21 MEPFSVAVSPS----GELLVLDSEN------------SNIYKISTSLS---P--YSRPKLVAGSPEGYYGHVDGRPRGAR 79 (445)
Q Consensus 21 ~~P~gIAVdpd----G~LYVaDs~n------------~rI~kid~dg~---~--~G~v~~vaG~~~G~~G~~dG~~~~a~ 79 (445)
..+.|||++|+ |.|||+-+.. .+|.|+..+.. . .....++...+... .
T Consensus 69 ~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~-----------~ 137 (463)
T 2wg3_C 69 RGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH-----------R 137 (463)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS-----------S
T ss_pred CcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC-----------C
Confidence 35789999995 8899986521 48888876421 1 12233333221000 1
Q ss_pred CCCcceEEEcCCCCEEEE--eCC---------------CCEEEEEcCCCcE-----EEe-cCcccCCCCCCCCC--ccCc
Q 013321 80 MNHPKGLAVDDRGNIYIA--DTM---------------NMAIRKISDTGVT-----TIA-GGKWSRGVGHVDGP--SEDA 134 (445)
Q Consensus 80 Ln~P~GIavD~dG~LYVA--D~~---------------N~rIrkfd~dGv~-----tia-Gg~~G~g~G~~dgp--~~~a 134 (445)
-..-..|++++||.|||+ |.. ..+|.||+.+|.. .+. .+... +..... .-..
T Consensus 138 ~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~---~~~~~~~eI~a~ 214 (463)
T 2wg3_C 138 KHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHF---NSTNQPPEVFAH 214 (463)
T ss_dssp SSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTT---TCSSSCTTEEEE
T ss_pred cccCCcEeECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCc---CCCCCcccEEEE
Confidence 234568999999999998 433 3579999988731 111 11100 000000 0112
Q ss_pred ccCCCceEEEECCC----C--eEEEEEC
Q 013321 135 KFSNDFDVVYVGSS----C--SLLVIDR 156 (445)
Q Consensus 135 ~f~~P~gI~~vd~d----G--~LyVaD~ 156 (445)
-+.+|+++++...+ | .+|++|.
T Consensus 215 G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 215 GLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp CCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred CCCCcceEEECCCCCCcccceEEEeccc
Confidence 46799999865443 4 5677886
No 129
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.80 E-value=0.088 Score=53.34 Aligned_cols=78 Identities=15% Similarity=0.206 Sum_probs=55.2
Q ss_pred CCCCceEEEEcC-CCcEEEEeCCCCeEEEEeCC--CCCCCccEEEecCCCCcccCCCCCccCccCC-CcceEEEc--CC-
Q 013321 19 FGMEPFSVAVSP-SGELLVLDSENSNIYKISTS--LSPYSRPKLVAGSPEGYYGHVDGRPRGARMN-HPKGLAVD--DR- 91 (445)
Q Consensus 19 ~g~~P~gIAVdp-dG~LYVaDs~n~rI~kid~d--g~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln-~P~GIavD--~d- 91 (445)
.+.+|.|+++|+ .|.|||++... .|++++.+ +...+++...++.. .|. .|.||++. ++
T Consensus 178 lgsq~EgcvvDd~~g~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~~~~g--------------~l~aDvEGLai~~~~~g 242 (355)
T 3amr_A 178 MNSQTEGMAADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGR--------------HLTRDIEGLTIYYAADG 242 (355)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTT-EEEEEECSTTSCSCCEEEEEBSSS--------------SBCSCEEEEEEEECGGG
T ss_pred CCCCcceEEEcCCCCeEEEecccc-eEEEEeCCcCCCCCceEEEEecCC--------------ccccCcceEEEEecCCC
Confidence 456899999998 68999999875 49999954 22122233232211 133 68999995 33
Q ss_pred -CCEEEEeCCCCEEEEEcCCC
Q 013321 92 -GNIYIADTMNMAIRKISDTG 111 (445)
Q Consensus 92 -G~LYVAD~~N~rIrkfd~dG 111 (445)
|.|+|++.+++...+|+..+
T Consensus 243 ~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 243 KGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp CEEEEEEEGGGTEEEEEESST
T ss_pred CEEEEEEcCCCCEEEEEECCC
Confidence 45999999999999999763
No 130
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.76 E-value=0.24 Score=46.26 Aligned_cols=70 Identities=13% Similarity=0.153 Sum_probs=44.0
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeE
Q 013321 82 HPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAI 161 (445)
Q Consensus 82 ~P~GIavD~dG~LYVAD~~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rI 161 (445)
...++++|++|.|||+.. ++.|.+++.+|.......... . .+..++ ++.++.|||+.. ++.|
T Consensus 216 ~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~~---~------------~~~~~~-~~~~g~l~v~t~-~ggl 277 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTSL-DGHLYAINPDGTEKWRFKTGK---R------------IESSPV-IGNTDTIYFGSY-DGHL 277 (330)
T ss_dssp CCSCCEECTTSCEEEEET-TTEEEEECTTSCEEEEEECSS---C------------CCSCCE-ECTTSCEEEECT-TCEE
T ss_pred ceeceEECCCCeEEEEcC-CCeEEEECCCCCEeEEeeCCC---C------------ccccce-EcCCCeEEEecC-CCCE
Confidence 456889999999999976 568999998774332111100 0 011223 467788888764 4578
Q ss_pred EEEECCCC
Q 013321 162 REIQLHDD 169 (445)
Q Consensus 162 r~i~l~~~ 169 (445)
.+++..+.
T Consensus 278 ~~~d~~g~ 285 (330)
T 3hxj_A 278 YAINPDGT 285 (330)
T ss_dssp EEECTTSC
T ss_pred EEECCCCc
Confidence 88876443
No 131
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.74 E-value=0.99 Score=45.63 Aligned_cols=174 Identities=11% Similarity=0.088 Sum_probs=94.7
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcCC----C----cEEEEeCC--CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCc
Q 013321 6 GGYTVETVFEGSKFGMEPFSVAVSPS----G----ELLVLDSE--NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRP 75 (445)
Q Consensus 6 ~G~~v~tv~~Gs~~g~~P~gIAVdpd----G----~LYVaDs~--n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~ 75 (445)
+|..+..+-. ..+++|.+-++ | -+|+++.. +++|..|+.+.. .+.+..+.+.. . .
T Consensus 58 ~G~~l~~~~~-----g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~-~~~l~~i~~~~--~-------p 122 (355)
T 3amr_A 58 DGKMLHSYNT-----GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK-NGTLQSMTDPD--H-------P 122 (355)
T ss_dssp TSCEEEEECC-----SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTT-TCCEEECSCTT--S-------C
T ss_pred CCcEEEEccC-----CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCC-CCceeeccccc--c-------C
Confidence 4555555422 25677777662 2 25888988 898888754311 13333332110 0 0
Q ss_pred cCccCCCcceEEE--cCC-CC--EEEEeCCCCEEEEEc----CCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEE
Q 013321 76 RGARMNHPKGLAV--DDR-GN--IYIADTMNMAIRKIS----DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 145 (445)
Q Consensus 76 ~~a~Ln~P~GIav--D~d-G~--LYVAD~~N~rIrkfd----~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~v 145 (445)
....+..|.|||+ ++. |. +||.+.. +++..+. .+| +..-.-..... -..|.++++.
T Consensus 123 v~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~l-------------gsq~EgcvvD 188 (355)
T 3amr_A 123 IATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKM-------------NSQTEGMAAD 188 (355)
T ss_dssp EECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEEC-------------SSCEEEEEEE
T ss_pred cCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecC-------------CCCcceEEEc
Confidence 0123678999999 764 53 7788875 7777643 233 21100000000 0246677777
Q ss_pred CCCCeEEEEECCCCeEEEEECCCCc-----ee-ecCCC---CccceEEEEeccceEEEEEEeecCccceeeec
Q 013321 146 GSSCSLLVIDRGNQAIREIQLHDDD-----CS-DNYDD---TFHLGIFVLVAAAFFGYMLALLQRRVQAMFSS 209 (445)
Q Consensus 146 d~dG~LyVaD~gn~rIr~i~l~~~~-----~~-~~~~~---g~P~gIav~~~a~~vg~~~~ll~~~~g~~~~s 209 (445)
+..+.|||++-..+ ||+|+.+... .. ..... .-+.||++.....--+|+++.-|..-.-.+|.
T Consensus 189 d~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 189 DEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp TTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred CCCCeEEEecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 77899999999854 9999966322 11 11112 24677877644433456666555554334443
No 132
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.72 E-value=0.063 Score=54.85 Aligned_cols=106 Identities=18% Similarity=0.281 Sum_probs=72.4
Q ss_pred CCceEEEEcCC----C-cEEEEeCCCCeEEEEeC----CCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEc-C
Q 013321 21 MEPFSVAVSPS----G-ELLVLDSENSNIYKIST----SLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD-D 90 (445)
Q Consensus 21 ~~P~gIAVdpd----G-~LYVaDs~n~rI~kid~----dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD-~ 90 (445)
..-.|||++|+ + .||++-..+.+++++.. +.+....+..+ |. .|. .....++++| .
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~----kg~---------~s~~~~~~~D~~ 285 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GN----RGK---------YNDAIALAYDPK 285 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EE----CCT---------TCCEEEEEECTT
T ss_pred cCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-ee----cCC---------CCCcceEEEeCC
Confidence 35679999986 3 49999988889999962 21111223322 21 110 1123367887 7
Q ss_pred CCCEEEEeCCCCEEEEEcCCC-c------EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEEC
Q 013321 91 RGNIYIADTMNMAIRKISDTG-V------TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR 156 (445)
Q Consensus 91 dG~LYVAD~~N~rIrkfd~dG-v------~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~ 156 (445)
+|+||+++..++.|.+.++++ . .+++ .+..|.+|.++. ++.+|.|||...
T Consensus 286 ~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~---------------~d~~l~~pd~~~-i~~~g~Lwv~sn 342 (381)
T 3q6k_A 286 TKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVY---------------TSSRFVFGTDIS-VDSKGGLWFMSN 342 (381)
T ss_dssp TCEEEEEESSSSEEEEEETTSCSBCGGGEEEEE---------------ECTTCCSEEEEE-ECTTSCEEEEEC
T ss_pred CCeEEEEeccCCeEEEEeCCCCccccCceEEEE---------------ECCCccccCeEE-ECCCCeEEEEEC
Confidence 999999999999999999876 2 2221 123788999996 788999999874
No 133
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.66 E-value=0.088 Score=51.52 Aligned_cols=109 Identities=10% Similarity=0.130 Sum_probs=68.3
Q ss_pred EEEEcCC-CcEEEEe---CCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCC-CCEEEEeC
Q 013321 25 SVAVSPS-GELLVLD---SENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYIADT 99 (445)
Q Consensus 25 gIAVdpd-G~LYVaD---s~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d-G~LYVAD~ 99 (445)
+.++.++ +.||++| .++..|++++.+|+ ....+.... . ++++++ +.||++|.
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs---~~~~lt~~~---------------~-----~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE---EKKKIKNHY---------------L-----FTCNTSDRYFYYNNP 164 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSC---CCEEEESSC---------------C-----CCSEEETTEEEEECT
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCC---CeEEEeCCC---------------c-----eEeeEECCEEEEEeC
Confidence 3355553 4699999 67889999999863 233343221 0 123333 45999998
Q ss_pred CCCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECC-CCeEEEEECCCCceeecCC
Q 013321 100 MNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-NQAIREIQLHDDDCSDNYD 176 (445)
Q Consensus 100 ~N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~g-n~rIr~i~l~~~~~~~~~~ 176 (445)
+...|.+++.+| ..++..+ +..+.+++..+.||.+|.. +.+|.++++++........
T Consensus 165 g~~~Iy~~~l~g~~~~~l~~~--------------------~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~ 224 (302)
T 3s25_A 165 KNGQLYRYDTASQSEALFYDC--------------------NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTE 224 (302)
T ss_dssp TTCCEEEEETTTTEEEEEECS--------------------CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSC
T ss_pred CCceEEEEECCCCCEEEEeCC--------------------CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeC
Confidence 888999999877 3333111 0011223456788888865 3689999998866555443
No 134
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.63 E-value=0.39 Score=51.95 Aligned_cols=159 Identities=9% Similarity=0.030 Sum_probs=92.4
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....+|+.|++|+|||+-.++ -|.++++++ +++..+.. . .+. .-+...+|+.|++|+|||+-.
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~-Gl~~~~~~~---~~~~~~~~-~-------~~l----~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGG-GVGIYTPDM---QLVRKFNQ-Y-------EGF----CSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSS-CEEEECTTC---CEEEEECT-T-------TTC----SCSCEEEEEECTTSCEEEEET-
T ss_pred ceeEEEEEcCCCCEEEEEcCC-CEEEEeCCC---CeEEEccC-C-------CCC----CCCeeEEEEECCCCCEEEEEC-
Confidence 457889999999999997544 488898763 33443321 1 110 123456899999999999976
Q ss_pred CCEEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeec-CCCC
Q 013321 101 NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN-YDDT 178 (445)
Q Consensus 101 N~rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~-~~~g 178 (445)
++-|.++|... ....-... ++... ....+++ .|.+|.||++. ++-|.+|++........ ...|
T Consensus 558 ~Glv~~~d~~~~~~~~~~~~--------~gl~~----~~i~~i~-~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~~~~dG 622 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQVFQRK--------EGLPN----THIRAIS-EDKNGNIWAST--NTGISCYITSKKCFYTYDHSNN 622 (781)
T ss_dssp TEEEEESCTTTCCCEEECGG--------GTCSC----CCCCEEE-ECSSSCEEEEC--SSCEEEEETTTTEEEEECGGGT
T ss_pred CCceEEECCCCCcEEEcccc--------CCCCC----ceEEEEE-ECCCCCEEEEc--CCceEEEECCCCceEEecccCC
Confidence 33338998654 22221111 11111 1124554 68899999995 45689999876544332 2223
Q ss_pred ccceEEEEeccceEEEEEEeecCccceeeeccCCCccccCCC
Q 013321 179 FHLGIFVLVAAAFFGYMLALLQRRVQAMFSSKDDPRTQMKRG 220 (445)
Q Consensus 179 ~P~gIav~~~a~~vg~~~~ll~~~~g~~~~s~~~~~~~~~~~ 220 (445)
.+.. .+. .-+++...-|.+.|...+.-..|++.
T Consensus 623 l~~~-------~f~--~~~~~~~~~G~l~~g~~~Gl~~f~p~ 655 (781)
T 3v9f_A 623 IPQG-------SFI--SGCVTKDHNGLIYFGSINGLCFFNPD 655 (781)
T ss_dssp CCSS-------CEE--EEEEEECTTSCEEEEETTEEEEECSC
T ss_pred cccc-------ccc--cCceEECCCCEEEEECCCceEEEChh
Confidence 3221 111 12344456677777777655545543
No 135
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.59 E-value=0.17 Score=54.63 Aligned_cols=159 Identities=11% Similarity=0.021 Sum_probs=91.3
Q ss_pred CCCCceEEEE-c-CCCc-EEEEe-----------------CCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCc
Q 013321 19 FGMEPFSVAV-S-PSGE-LLVLD-----------------SENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGA 78 (445)
Q Consensus 19 ~g~~P~gIAV-d-pdG~-LYVaD-----------------s~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a 78 (445)
.+..|+|+++ . |++. ||++. ...+.|..||.+. .++...+-. +|
T Consensus 132 ~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t---~~v~~qI~V--------gg----- 195 (595)
T 1fwx_A 132 NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK---WEVAWQVLV--------SG----- 195 (595)
T ss_dssp SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTT---TEEEEEEEE--------SS-----
T ss_pred CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCC---CeEEEEEEe--------CC-----
Confidence 4467999998 4 6655 78884 2335777777762 222211111 11
Q ss_pred cCCCcceEEEcCCCC-EEEEeCCC--------------CEEEEEc--------CCC-------cEEEecCcccCCCCCCC
Q 013321 79 RMNHPKGLAVDDRGN-IYIADTMN--------------MAIRKIS--------DTG-------VTTIAGGKWSRGVGHVD 128 (445)
Q Consensus 79 ~Ln~P~GIavD~dG~-LYVAD~~N--------------~rIrkfd--------~dG-------v~tiaGg~~G~g~G~~d 128 (445)
+|.+++++++|. +|++.... ..|.++| ++| +..|-+... . +..
T Consensus 196 ---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~-~--~~~- 268 (595)
T 1fwx_A 196 ---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKE-A--SSL- 268 (595)
T ss_dssp ---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG-G--CCS-
T ss_pred ---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCccc-C--Cce-
Confidence 588999999888 88888765 3466666 223 222211110 0 000
Q ss_pred CCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCc-------------eeecCCCCccceEEEEeccceEEE
Q 013321 129 GPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDD-------------CSDNYDDTFHLGIFVLVAAAFFGY 194 (445)
Q Consensus 129 gp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~~~~-------------~~~~~~~g~P~gIav~~~a~~vg~ 194 (445)
-......=..|+++. +++|| .+||++.+.++|..|+..... .....-...|..++....+ .+|
T Consensus 269 ~~~~Ipvg~~PhGv~-~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG--~aY 345 (595)
T 1fwx_A 269 FTRYIPIANNPHGCN-MAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG--NAY 345 (595)
T ss_dssp SEEEEEEESSCCCEE-ECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS--EEE
T ss_pred eEEEEecCCCceEEE-EcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC--eEE
Confidence 000000114799997 57777 699999999999999988531 1222223357777776654 456
Q ss_pred EEEeecCcc
Q 013321 195 MLALLQRRV 203 (445)
Q Consensus 195 ~~~ll~~~~ 203 (445)
.+..+-.-+
T Consensus 346 ~t~~ldsqV 354 (595)
T 1fwx_A 346 TSLFLDSQV 354 (595)
T ss_dssp EEETTTTEE
T ss_pred EEEecCCcE
Confidence 555443333
No 136
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.06 E-value=0.38 Score=46.91 Aligned_cols=63 Identities=16% Similarity=0.145 Sum_probs=42.4
Q ss_pred EcCCCC-EEEE-eCCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEE
Q 013321 88 VDDRGN-IYIA-DTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIRE 163 (445)
Q Consensus 88 vD~dG~-LYVA-D~~N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~ 163 (445)
++++|. ||.+ |.....|.+++.+| ..++..+. ...|. --++.||++|...+.|.+
T Consensus 230 ~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~~-------------------~~~i~--i~~d~Iy~td~~~~~i~~ 288 (302)
T 3s25_A 230 YNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKGE-------------------FCNIN--VTSQYVYFTDFVSNKEYC 288 (302)
T ss_dssp EEEETTEEEEEECSSSCEEEEEETTSCCCEEEEESC-------------------EEEEE--ECSSEEEEEETTTCCEEE
T ss_pred EEECCCEEEEEECCCCcEEEEEECCCCccEEeeCCc-------------------cceEE--EeCCEEEEEECCCCeEEE
Confidence 555554 8876 66678899999888 34443210 11333 256799999988888999
Q ss_pred EECCCCce
Q 013321 164 IQLHDDDC 171 (445)
Q Consensus 164 i~l~~~~~ 171 (445)
+.+++...
T Consensus 289 ~~~dGs~~ 296 (302)
T 3s25_A 289 TSTQNPDT 296 (302)
T ss_dssp EESSSCCS
T ss_pred EECCCCCc
Confidence 99877543
No 137
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.91 E-value=2.2 Score=39.01 Aligned_cols=113 Identities=7% Similarity=-0.039 Sum_probs=71.3
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
....++++++|.++++-..++.|..++... ++....... -.....+++.++|.++++-..+
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~---~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDNTVRSWDLRE---GRQLQQHDF----------------TSQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEEC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEECCC---CceEeeecC----------------CCceEEEEECCCCCEEEEEcCC
Confidence 467889988888777777788888888752 332222111 1135689999999877666667
Q ss_pred CEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 102 MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 102 ~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
+.|+.+|... ...+... -....++. ..+++.++++-..++.|+.+++.....
T Consensus 246 ~~i~~~~~~~~~~~~~~~~-----------------~~~v~~~~-~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 246 SNVEVLHVNKPDKYQLHLH-----------------ESCVLSLK-FAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp SCEEEEETTSSCEEEECCC-----------------SSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CcEEEEECCCCCeEEEcCC-----------------ccceeEEE-ECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 8899998654 2222110 01233444 466777666666677888888765443
No 138
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.68 E-value=0.64 Score=44.50 Aligned_cols=112 Identities=20% Similarity=0.193 Sum_probs=67.0
Q ss_pred eEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc---EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 24 FSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP---KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 24 ~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v---~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
..+.+|++|.||++ .+++|+|+++..+..... .+.+|.. | ...=..|+++++|.||.++
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~----g----------w~~~~~lff~p~G~Lyav~-- 152 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSG----G----------WSGFKFLFFHPNGYLYAVH-- 152 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECS----S----------GGGEEEEEECTTSCEEEEE--
T ss_pred eEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccC----C----------CCceEEEEECCCceEEEEe--
Confidence 47899999999999 358999999742111111 1222221 1 1112689999999999998
Q ss_pred CCEEEEEc-CCC-------cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 101 NMAIRKIS-DTG-------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 101 N~rIrkfd-~dG-------v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
+.+|.+-. +.+ ..+..+. .+. .-.-+++.+++|.||.+. +++|++...+...|
T Consensus 153 dg~lyr~~~P~~~~~~wl~~~~~~g~-----~g~-----------~~yr~l~f~~~G~l~~v~--~g~~Y~~~~p~~~~ 213 (236)
T 1tl2_A 153 GQQFYKALPPVSNQDNWLARATKIGQ-----GGW-----------DTFKFLFFSSVGTLFGVQ--GGKFYEDYPPSYAY 213 (236)
T ss_dssp TTEEEEECCCSSTTCCHHHHCEEEES-----SSG-----------GGEEEEEECTTSCEEEEE--TTEEEEESCCCSTT
T ss_pred CCcEEecCCCCCCCcccccccceecc-----CCc-----------ceEEEEEECCCCcEEEEe--CCeEEecCCccccC
Confidence 45575533 321 1111110 010 011123468999999999 78999997665443
No 139
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.53 E-value=2.7 Score=38.40 Aligned_cols=113 Identities=10% Similarity=0.099 Sum_probs=66.2
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 102 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~ 102 (445)
...++++++|.++++-..++.|..++... ++....... .-.....|+++++|.++++=..++
T Consensus 144 i~~~~~~~~~~~l~~~~~dg~v~~~d~~~---~~~~~~~~~---------------~~~~i~~~~~~~~~~~l~~~~~dg 205 (337)
T 1gxr_A 144 CYALAISPDSKVCFSCCSDGNIAVWDLHN---QTLVRQFQG---------------HTDGASCIDISNDGTKLWTGGLDN 205 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECC---------------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCC---Cceeeeeec---------------ccCceEEEEECCCCCEEEEEecCC
Confidence 56788888877766666677888887652 232222111 012356899999998766666678
Q ss_pred EEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc
Q 013321 103 AIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 103 rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~ 170 (445)
.|+.+|... ........ . .....+. ..+++.++++-..++.|+.+++....
T Consensus 206 ~i~~~d~~~~~~~~~~~~--------~--------~~v~~~~-~s~~~~~l~~~~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQHDF--------T--------SQIFSLG-YCPTGEWLAVGMESSNVEVLHVNKPD 257 (337)
T ss_dssp EEEEEETTTTEEEEEEEC--------S--------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTSSC
T ss_pred cEEEEECCCCceEeeecC--------C--------CceEEEE-ECCCCCEEEEEcCCCcEEEEECCCCC
Confidence 999999554 22111100 0 0123333 45566655555556777777766543
No 140
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.40 E-value=2.8 Score=42.28 Aligned_cols=110 Identities=13% Similarity=0.205 Sum_probs=70.4
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
...+|+++|++.++++-..++.|..++.++ ..+..+.+. -.....|++.++|.++++=..+
T Consensus 428 ~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~---~~~~~~~~~----------------~~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 428 SVWGVAFSPDDQTIASASDDKTVKLWNRNG---QLLQTLTGH----------------SSSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTS---CEEEEEECC----------------SSCEEEEEECTTSCEEEEEETT
T ss_pred CeEEEEECCCCCEEEEEcCCCEEEEEECCC---CEEEEEcCC----------------CCCEEEEEEcCCCCEEEEEeCC
Confidence 457899999998888877888898888763 122333221 1134689999999977766667
Q ss_pred CEEEEEcCCCc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 102 MAIRKISDTGV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 102 ~rIrkfd~dGv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
+.|+..|.+|. .++.+.. ....+|+ ..++|.++++-...+.|+.++..+
T Consensus 489 ~~i~iw~~~~~~~~~~~~h~-----------------~~v~~l~-~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 489 KTVKLWNRNGQLLQTLTGHS-----------------SSVRGVA-FSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SEEEEEETTSCEEEEEECCS-----------------SCEEEEE-ECTTSSCEEEEETTSEEEEECTTS
T ss_pred CEEEEEcCCCCEEEEEeCCC-----------------CCEEEEE-EcCCCCEEEEEECcCEEEEEeCCC
Confidence 88999998773 3332210 1123443 456666666555566777776544
No 141
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=93.78 E-value=0.18 Score=51.46 Aligned_cols=64 Identities=13% Similarity=0.266 Sum_probs=49.8
Q ss_pred CceEEEEc-CCCcEEEEeCCCCeEEEEeCCC-CC-CCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEe
Q 013321 22 EPFSVAVS-PSGELLVLDSENSNIYKISTSL-SP-YSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 98 (445)
Q Consensus 22 ~P~gIAVd-pdG~LYVaDs~n~rI~kid~dg-~~-~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 98 (445)
+-.++++| .+|.||+++..++.|.+++.++ .+ .+...+++-.+ +|.+|.+|+++.+|.|||.-
T Consensus 276 ~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~--------------~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 276 DAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS--------------RFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT--------------TCCSEEEEEECTTSCEEEEE
T ss_pred CcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC--------------CccccCeEEECCCCeEEEEE
Confidence 44578897 6899999999999999999874 22 13345555432 68899999999999999976
Q ss_pred C
Q 013321 99 T 99 (445)
Q Consensus 99 ~ 99 (445)
.
T Consensus 342 n 342 (381)
T 3q6k_A 342 N 342 (381)
T ss_dssp C
T ss_pred C
Confidence 3
No 142
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.62 E-value=5 Score=38.00 Aligned_cols=115 Identities=14% Similarity=0.169 Sum_probs=74.1
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
....++++|+|.++++-..++.|..++... ++....... + -.....|++.++|.++++=...
T Consensus 166 ~v~~~~~spdg~~lasg~~dg~i~iwd~~~---~~~~~~~~~------h---------~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLHTLEG------H---------AMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECC------C---------SSCCCEEEECTTSCEEEEECTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCC---CcEEEEEcc------c---------CCceeEEEEcCCCCEEEEEcCC
Confidence 457899999999888888888999998763 333222211 1 1123589999999977776677
Q ss_pred CEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCcee
Q 013321 102 MAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 172 (445)
Q Consensus 102 ~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~ 172 (445)
+.|+.+|... +.++.+.. ....++. ..+++.++++-...+.|+..++....+.
T Consensus 228 g~i~iwd~~~~~~~~~~~~h~-----------------~~v~~~~-~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGTLSGHA-----------------SWVLNVA-FCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp SCEEEEETTTCCEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CeEEEEECCCcceeEEEcCCC-----------------CceEEEE-ECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 8899998543 22322110 1123444 4667777777667778888887665543
No 143
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.50 E-value=1.2 Score=41.21 Aligned_cols=110 Identities=14% Similarity=0.044 Sum_probs=68.9
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
...+|+++++|.++++-..++.|..++... ++........ -..-.+|++.++|+++++=..+
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~h---------------~~~v~~~~~~~~~~~l~s~~~d 95 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLN---GERLGTLDGH---------------TGTIWSIDVDCFTKYCVTGSAD 95 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTT---CCEEEEECCC---------------SSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---chhhhhhhhc---------------CCcEEEEEEcCCCCEEEEEeCC
Confidence 468999999999888877788999998652 3332222110 1134588999999877666667
Q ss_pred CEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCC-----CeEEEEECCC
Q 013321 102 MAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-----QAIREIQLHD 168 (445)
Q Consensus 102 ~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn-----~rIr~i~l~~ 168 (445)
+.|+.+|.. + +.++... ....++. ..+++.++++-..+ +.|+.+++..
T Consensus 96 g~i~iwd~~~~~~~~~~~~~------------------~~v~~~~-~~~~~~~l~~~~~~~~~~~g~i~~~d~~~ 151 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSP------------------VPVKRVE-FSPCGNYFLAILDNVMKNPGSINIYEIER 151 (369)
T ss_dssp TEEEEEETTTCCEEEEEECS------------------SCEEEEE-ECTTSSEEEEEECCBTTBCCEEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEeecC------------------CCeEEEE-EccCCCEEEEecCCccCCCCEEEEEEecC
Confidence 889999854 3 2222110 1123343 46666666655555 7777777644
No 144
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.42 E-value=3.2 Score=40.12 Aligned_cols=122 Identities=11% Similarity=0.006 Sum_probs=77.7
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
....|+++|+|.++++-+.++.|..++... +....+....... ....+..-..+++.++|.++++=..+
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~---~~~~~~~~~~~~~--------~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDDGTCRLFDMRT---GHQLQVYNREPDR--------NDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp CCCEEEECTTSSEEEEECSSSCEEEEETTT---TEEEEEECCCCSS--------SCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred CeEEEEEecCCCeEEEEcCCCeEEEEECCC---CcEEEEecccccc--------cccccCceEEEEECCCCCEEEEEECC
Confidence 356899999999989888889999998763 3333322211000 00122335689999999988888888
Q ss_pred CEEEEEcCC-Cc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 102 MAIRKISDT-GV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 102 ~rIrkfd~d-Gv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
+.|+.+|.. +. ..+..... + .-..-.++. ..++|.++++-...+.|+..++.+
T Consensus 320 g~i~vwd~~~~~~~~~~~~~~~----~---------h~~~v~~l~-~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 320 GDCYVWDTLLAEMVLNLGTLQN----S---------HEGRISCLG-LSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SCEEEEETTTCCEEEEECCSCS----S---------CCCCCCEEE-ECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCEEEEECCCCceEEEEecccC----C---------CCCceEEEE-ECCCCCEEEEeeCCCCEEEEecCC
Confidence 999999953 32 22211000 0 111234554 578888888888788888888654
No 145
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.26 E-value=2.5 Score=45.62 Aligned_cols=158 Identities=9% Similarity=0.043 Sum_probs=90.3
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
.....|+.|++|.|||+.. +-|.+++..+ +.+ .+.... .. .+ + .-+...+|+.|++|+|||+-..
T Consensus 498 ~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~---~~~-~~~~~~-~~----~~-l---~~~~i~~i~~d~~g~lWigT~~ 562 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWIGGE--EGLSVFKQEG---LDI-QKASIL-PV----SN-V---TKLFTNCIYEASNGIIWVGTRE 562 (795)
T ss_dssp CCEEEEEECTTCCEEEEES--SCEEEEEEET---TEE-EECCCS-CS----CG-G---GGSCEEEEEECTTSCEEEEESS
T ss_pred ceEEEEEECCCCCEEEEeC--CceEEEeCCC---CeE-EEecCC-CC----CC-C---CCCeeEEEEECCCCCEEEEeCC
Confidence 3467899999999999886 4688888753 223 221100 00 00 0 1234568999999999998764
Q ss_pred CCEEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-cCCCC
Q 013321 101 NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDDT 178 (445)
Q Consensus 101 N~rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~-~~~~g 178 (445)
.|.++|... ....-... ++... ....+| +.|.+|.||++. ++-|.++++....... ....|
T Consensus 563 --Gl~~~d~~~~~~~~~~~~--------~gl~~----~~i~~i-~~d~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~dG 625 (795)
T 4a2l_A 563 --GFYCFNEKDKQIKRYNTT--------NGLPN----NVVYGI-LEDSFGRLWLST--NRGISCFNPETEKFRNFTESDG 625 (795)
T ss_dssp --CEEEEETTTTEEEEECGG--------GTCSC----SCEEEE-EECTTSCEEEEE--TTEEEEEETTTTEEEEECGGGT
T ss_pred --CceeECCCCCcEEEeCCC--------CCCch----hheEEE-EECCCCCEEEEc--CCceEEEcCCCCcEEEcCCcCC
Confidence 699999755 33221111 11111 112345 468899999997 4778999987655433 22223
Q ss_pred ccceEEEEeccceEEEEEEeecCccceeeeccCCCccccCC
Q 013321 179 FHLGIFVLVAAAFFGYMLALLQRRVQAMFSSKDDPRTQMKR 219 (445)
Q Consensus 179 ~P~gIav~~~a~~vg~~~~ll~~~~g~~~~s~~~~~~~~~~ 219 (445)
.+.. .+ ..-+++...-|.+.|...+.-..|++
T Consensus 626 l~~~-------~f--~~~~~~~~~~G~l~~g~~~Gl~~~~p 657 (795)
T 4a2l_A 626 LQSN-------QF--NTASYCRTSVGQMYFGGINGITTFRP 657 (795)
T ss_dssp CSCS-------CE--EEEEEEECTTSCEEEEETTEEEEECG
T ss_pred Cccc-------cC--ccCceeECCCCeEEEecCCceEEEcH
Confidence 3321 11 11234445666777776665444444
No 146
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.86 E-value=5 Score=38.09 Aligned_cols=113 Identities=9% Similarity=-0.034 Sum_probs=71.6
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 99 (445)
.....++++++|.++++-..++.|..++..+ ..+..+.+. -....+|++.++|. ++++-.
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~h----------------~~~v~~~~~~~~~~~~l~s~~ 224 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---HEIFKEKLH----------------KAKVTHAEFNPRCDWLMATSS 224 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTS---CEEEEEECS----------------SSCEEEEEECSSCTTEEEEEE
T ss_pred CCeEEEEECCCCCEEEEECCCCCEEEEECCC---CEEEEeccC----------------CCcEEEEEECCCCCCEEEEEe
Confidence 3467899999988888887888999998752 122233221 12356899999998 777766
Q ss_pred CCCEEEEEcCC-----CcEEEecCcccCCCCCCCCCccCcccCCCceEEEECC-CCeEEEEECCCCeEEEEECCCC
Q 013321 100 MNMAIRKISDT-----GVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 100 ~N~rIrkfd~d-----Gv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~-dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
..+.|+.+|.. +......+. -....++. ..+ ++.++++-...+.|+.+++...
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~~~----------------~~~v~~~~-~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 225 VDATVKLWDLRNIKDKNSYIAEMPH----------------EKPVNAAY-FNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp TTSEEEEEEGGGCCSTTCEEEEEEC----------------SSCEEEEE-ECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred CCCEEEEEeCCCCCcccceEEEecC----------------CCceEEEE-EcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 77889998843 211111010 01223444 455 7777776667788888887653
No 147
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=92.85 E-value=6.5 Score=37.16 Aligned_cols=112 Identities=13% Similarity=0.193 Sum_probs=70.1
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 102 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~ 102 (445)
...++++|+|.++++...++.|..++... ++........ -.....+++.++|.++++=..++
T Consensus 125 ~~~~~~spdg~~l~~g~~dg~v~i~~~~~---~~~~~~~~~~---------------~~~v~~~~~spdg~~lasg~~dg 186 (321)
T 3ow8_A 125 AWTLAFSPDSQYLATGTHVGKVNIFGVES---GKKEYSLDTR---------------GKFILSIAYSPDGKYLASGAIDG 186 (321)
T ss_dssp CCCEEECTTSSEEEEECTTSEEEEEETTT---CSEEEEEECS---------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEEcCC---CceeEEecCC---------------CceEEEEEECCCCCEEEEEcCCC
Confidence 45788999988888888888888888753 2222211110 11345899999999777666678
Q ss_pred EEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc
Q 013321 103 AIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 103 rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~ 170 (445)
.|+.+|.. + +.++.+.. ....++. ..+++.++++-...+.|+.+++....
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~-----------------~~v~~l~-~spd~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHA-----------------MPIRSLT-FSPDSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp CEEEEETTTTEEEEEECCCS-----------------SCCCEEE-ECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred eEEEEECCCCcEEEEEcccC-----------------CceeEEE-EcCCCCEEEEEcCCCeEEEEECCCcc
Confidence 89999954 4 22322110 0123343 46677777776667778888776543
No 148
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.60 E-value=2.5 Score=45.62 Aligned_cols=120 Identities=8% Similarity=0.056 Sum_probs=74.6
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....+|+.|++|.|||+-. +-|.++++.+ +++..+..... .+ ..-+...+|+.|++|+|||+-.+
T Consensus 450 ~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~---~~~~~~~~~~~------~~----~~~~~i~~i~~d~~g~lWigt~~ 514 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIGTH--AGVFVIDLAS---KKVIHHYDTSN------SQ----LLENFVRSIAQDSEGRFWIGTFG 514 (781)
T ss_dssp CCEEEEEECTTSEEEEEET--TEEEEEESSS---SSCCEEECTTT------SS----CSCSCEEEEEECTTCCEEEEESS
T ss_pred CeEEEEEECCCCCEEEEEC--CceEEEeCCC---CeEEecccCcc------cc----cccceeEEEEEcCCCCEEEEEcC
Confidence 4567899999999999875 5799998763 33433322110 00 01245679999999999999764
Q ss_pred CCEEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc
Q 013321 101 NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 101 N~rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~ 170 (445)
+ -|.+++.++ ........ ++.. -....+| +.|.+|.|||+.. ++.|.++++....
T Consensus 515 ~-Gl~~~~~~~~~~~~~~~~--------~~l~----~~~i~~i-~~d~~g~lWi~T~-~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 515 G-GVGIYTPDMQLVRKFNQY--------EGFC----SNTINQI-YRSSKGQMWLATG-EGLVCFPSARNFD 570 (781)
T ss_dssp S-CEEEECTTCCEEEEECTT--------TTCS----CSCEEEE-EECTTSCEEEEET-TEEEEESCTTTCC
T ss_pred C-CEEEEeCCCCeEEEccCC--------CCCC----CCeeEEE-EECCCCCEEEEEC-CCceEEECCCCCc
Confidence 3 488899765 22221110 1100 1123455 4689999999976 4444888876543
No 149
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.52 E-value=2.5 Score=40.79 Aligned_cols=116 Identities=12% Similarity=0.152 Sum_probs=68.2
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEe---
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD--- 98 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD--- 98 (445)
....|+++++|.++++-..++.|..++... ++....... ++ . -..+..+++.++|.++++-
T Consensus 178 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~-----~~-~-------~~~~~~~~~~~~~~~l~~g~~~ 241 (402)
T 2aq5_A 178 TIYSVDWSRDGALICTSCRDKRVRVIEPRK---GTVVAEKDR-----PH-E-------GTRPVHAVFVSEGKILTTGFSR 241 (402)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTT---TEEEEEEEC-----SS-C-------SSSCCEEEECSTTEEEEEEECT
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEeCCC---Cceeeeecc-----CC-C-------CCcceEEEEcCCCcEEEEeccC
Confidence 457788888887767666777888887652 333222200 00 0 0135689999999877765
Q ss_pred CCCCEEEEEcCCC----cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCc
Q 013321 99 TMNMAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 99 ~~N~rIrkfd~dG----v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~~~~ 170 (445)
..++.|+.+|... +.+..... -.....+.+ ++++ .|+++....+.|+.+++....
T Consensus 242 ~~d~~i~iwd~~~~~~~~~~~~~~~----------------~~~v~~~~~-s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPLSLQELDT----------------SSGVLLPFF-DPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TCCEEEEEEETTBCSSCSEEEECCC----------------CSSCEEEEE-ETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCCceEEEEcCccccCCceEEeccC----------------CCceeEEEE-cCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 5678899998543 12221100 012334444 4444 555677677888888876543
No 150
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.38 E-value=3.3 Score=40.24 Aligned_cols=112 Identities=15% Similarity=0.107 Sum_probs=70.3
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 102 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~ 102 (445)
-..|+++++|.++++-..++.|..++... ++....... + -..-..|++.++|..+++=...+
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~---~~~~~~~~~------h---------~~~v~~~~~~p~~~~l~s~s~d~ 187 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIEN---RKIVMILQG------H---------EQDIYSLDYFPSGDKLVSGSGDR 187 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECC------C---------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCC---CcEEEEEcc------C---------CCCEEEEEEcCCCCEEEEecCCC
Confidence 46899999999888888889999998763 333322211 1 11235899999998777766788
Q ss_pred EEEEEcCC-Cc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc
Q 013321 103 AIRKISDT-GV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 103 rIrkfd~d-Gv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~ 170 (445)
.|+..|.. +. .++... .....+++...++.++++-...+.|+.+++....
T Consensus 188 ~v~iwd~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~ 240 (393)
T 1erj_A 188 TVRIWDLRTGQCSLTLSIE------------------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 240 (393)
T ss_dssp EEEEEETTTTEEEEEEECS------------------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC
T ss_pred cEEEEECCCCeeEEEEEcC------------------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 89999854 32 222110 0122333323366666666667777777765543
No 151
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=92.32 E-value=6.8 Score=36.06 Aligned_cols=114 Identities=10% Similarity=0.171 Sum_probs=67.3
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 102 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~ 102 (445)
...++++++++++++-..++.|..++... ++........ -..-..++++++|.++++=...+
T Consensus 110 v~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDESVRIWDVKT---GKCLKTLPAH---------------SDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTT---CCEEEEECCC---------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCC---CEEEEEecCC---------------CCcEEEEEEcCCCCEEEEEeCCC
Confidence 46788888888888777788888888752 2222211110 11235788999998776666677
Q ss_pred EEEEEcCC-Cc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 103 AIRKISDT-GV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 103 rIrkfd~d-Gv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
.|+.+|.. +. ..+.... ..+...+...+++..+++-...+.|+.+++....+
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDD-----------------NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 226 (312)
T ss_dssp CEEEEETTTCCEEEEECCSS-----------------CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE
T ss_pred cEEEEECCCCceeeEEeccC-----------------CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 89999854 32 2221100 01122233566666666666667777777665443
No 152
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=92.19 E-value=7 Score=35.96 Aligned_cols=127 Identities=17% Similarity=0.234 Sum_probs=75.9
Q ss_pred CcEEEEEecCCCCCCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceE
Q 013321 7 GYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGL 86 (445)
Q Consensus 7 G~~v~tv~~Gs~~g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GI 86 (445)
.+.+...+.|... .-..|+++|+|+++++-..++.|..++... ++....... + -..-..|
T Consensus 12 ~~~~~~~~~gh~~--~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~---~~~~~~~~~------h---------~~~v~~~ 71 (312)
T 4ery_A 12 NYALKFTLAGHTK--AVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTISG------H---------KLGISDV 71 (312)
T ss_dssp CCEEEEEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTT---CCEEEEECC------C---------SSCEEEE
T ss_pred CceeEEEEcccCC--cEEEEEECCCCCEEEEeeCCCeEEEEeCCC---cccchhhcc------C---------CCceEEE
Confidence 3444444444433 467999999999888887888898888752 333322211 1 1124589
Q ss_pred EEcCCCCEEEEeCCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEE
Q 013321 87 AVDDRGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIRE 163 (445)
Q Consensus 87 avD~dG~LYVAD~~N~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~ 163 (445)
++.++|+++++=..++.|+.+|.. + +.++.+.. ..-.++. ..+++.++++-..++.|+.
T Consensus 72 ~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~s~~~d~~i~i 133 (312)
T 4ery_A 72 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-----------------NYVFCCN-FNPQSNLIVSGSFDESVRI 133 (312)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCEEE
T ss_pred EEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCC-----------------CCEEEEE-EcCCCCEEEEEeCCCcEEE
Confidence 999999977776677889999843 3 23332211 0112232 3555666666556667777
Q ss_pred EECCCCce
Q 013321 164 IQLHDDDC 171 (445)
Q Consensus 164 i~l~~~~~ 171 (445)
+++....+
T Consensus 134 wd~~~~~~ 141 (312)
T 4ery_A 134 WDVKTGKC 141 (312)
T ss_dssp EETTTCCE
T ss_pred EECCCCEE
Confidence 77655433
No 153
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.19 E-value=2.2 Score=41.39 Aligned_cols=114 Identities=11% Similarity=0.046 Sum_probs=66.2
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMN 101 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~N 101 (445)
-..|+++++|+++++-..++.|..++... ++...... |+ -..-..+++.+++. ++++=...
T Consensus 130 V~~v~~spdg~~l~sgs~d~~i~iwd~~~---~~~~~~~~------~h---------~~~V~~~~~~~~~~~~l~s~s~D 191 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDICIKVWDLAQ---QVVLSSYR------AH---------AAQVTCVAASPHKDSVFLSCSED 191 (344)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEEC------CC---------SSCEEEEEECSSCTTEEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCC---CcEEEEEc------Cc---------CCceEEEEecCCCCCceeeeccc
Confidence 46889999999888888888888888762 33322211 11 11235788888774 77765566
Q ss_pred CEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 102 MAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 102 ~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
+.|+..|.. + +..+..... -....++++...++.++++-..++.|+.+++...
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~~~---------------~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~ 247 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCSAP---------------GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST 247 (344)
T ss_dssp SCEEEEETTSSSCEEECC-------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-
T ss_pred cccccccccccceeeeeeccee---------------eccceeeeecCCCCcceEEeccCCcEEEEECCCC
Confidence 788888843 3 222211000 0122344433345566666666677777776543
No 154
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=91.68 E-value=12 Score=37.53 Aligned_cols=71 Identities=14% Similarity=0.222 Sum_probs=50.4
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
....+|++.|+|.++++-..++.|..++.+ ++.. .+.|. -....++++.++|.++++=.
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~----~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~t~~ 322 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASDDKTVKLWNRN----GQLLQTLTGH----------------SSSVWGVAFSPDGQTIASAS 322 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETT----SCEEEEECCC----------------SSCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCEEEEEeCC----CcEEEEEecC----------------CCCeEEEEECCCCCEEEEEe
Confidence 346789999999988887778888888876 3332 22221 11345889999998777666
Q ss_pred CCCEEEEEcCCC
Q 013321 100 MNMAIRKISDTG 111 (445)
Q Consensus 100 ~N~rIrkfd~dG 111 (445)
.++.|+..|.++
T Consensus 323 ~d~~i~~w~~~~ 334 (577)
T 2ymu_A 323 DDKTVKLWNRNG 334 (577)
T ss_dssp TTSCEEEEETTS
T ss_pred CCCeEEEEeCCC
Confidence 677888888766
No 155
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.57 E-value=6 Score=42.38 Aligned_cols=152 Identities=13% Similarity=0.087 Sum_probs=86.5
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
...+|+.|++|+|||+...++-|.++++.. +++..+... +.. .-..+.+|+.|.+|+|||+-.
T Consensus 473 ~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~---~~~~~~~~~--~~~----------~~~~~~~i~~d~~g~lWigt~-- 535 (758)
T 3ott_A 473 FINQIIPDNEGNVWVLLYNNKGIDKINPRT---REVTKLFAD--ELT----------GEKSPNYLLCDEDGLLWVGFH-- 535 (758)
T ss_dssp CEEEEEECTTSCEEEEETTCSSEEEEETTT---TEEEEECTT--TSC----------GGGCEEEEEECTTSCEEEEET--
T ss_pred eeeeEEEcCCCCEEEEccCCCCcEEEeCCC---CceEEecCC--CcC----------CCcccceEEECCCCCEEEEec--
Confidence 467899999999999443346699999863 445444211 000 013567899999999999963
Q ss_pred CEEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeecCCCCcc
Q 013321 102 MAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYDDTFH 180 (445)
Q Consensus 102 ~rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~~~~~g~P 180 (445)
.-|.++++.. .... ... ++.. -....+|+ . .+|.||+.. ++-|.+|++......... .+
T Consensus 536 ~Gl~~~~~~~~~~~~-~~~--------~gl~----~~~i~~i~-~-~~g~lWi~t--~~Gl~~~~~~~~~~~~~~---~~ 595 (758)
T 3ott_A 536 GGVMRINPKDESQQS-ISF--------GSFS----NNEILSMT-C-VKNSIWVST--TNGLWIIDRKTMDARQQN---MT 595 (758)
T ss_dssp TEEEEECC--CCCCB-CCC--------CC-------CCEEEEE-E-ETTEEEEEE--SSCEEEEETTTCCEEEC-----C
T ss_pred CceEEEecCCCceEE-ecc--------cCCC----ccceEEEE-E-CCCCEEEEC--CCCeEEEcCCCceeEEec---CC
Confidence 4699999654 2111 000 1111 12234554 3 489999987 456899998765444321 11
Q ss_pred ceEEEEeccceEEEEEEeecCccceeeeccCCCccccCCC
Q 013321 181 LGIFVLVAAAFFGYMLALLQRRVQAMFSSKDDPRTQMKRG 220 (445)
Q Consensus 181 ~gIav~~~a~~vg~~~~ll~~~~g~~~~s~~~~~~~~~~~ 220 (445)
. ..+. .+++...-|.+.|...+.-..|+|.
T Consensus 596 ~-------~~~~---~~~~~~~~G~l~fG~~~Gl~~f~p~ 625 (758)
T 3ott_A 596 N-------KRFT---SLLFDPKEDCVYLGGADGFGISHSN 625 (758)
T ss_dssp C-------CCCS---EEEEETTTTEEEEECBSEEEEEEC-
T ss_pred C-------Ccee---eeEEECCCCcEEEecCCceEEEChh
Confidence 1 1111 1233445677777777665555554
No 156
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.43 E-value=8.6 Score=37.98 Aligned_cols=71 Identities=15% Similarity=0.138 Sum_probs=41.4
Q ss_pred CceEEEEcCCCc-EEEEeC--CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEE
Q 013321 22 EPFSVAVSPSGE-LLVLDS--ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 97 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs--~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 97 (445)
....++++|||. |+++.. ++..|+.++..+ ++...+.+.. .....+++.++|. |+++
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~---~~~~~l~~~~----------------~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS---GQIRQVTDGR----------------SNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCEEECCCCS----------------SCEEEEEECTTSSEEEEE
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCC---CCEEeCcCCC----------------CcccceEECCCCCEEEEE
Confidence 356788888877 443433 245677777653 3333322210 1245788999998 5544
Q ss_pred eC--CCCEEEEEcCCC
Q 013321 98 DT--MNMAIRKISDTG 111 (445)
Q Consensus 98 D~--~N~rIrkfd~dG 111 (445)
-. +..+|..+|.++
T Consensus 285 s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 285 SDQAGRPQVYKVNING 300 (415)
T ss_dssp ECTTSSCEEEEEETTS
T ss_pred ECCCCCcEEEEEECCC
Confidence 32 344888888654
No 157
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.15 E-value=4.2 Score=38.37 Aligned_cols=81 Identities=19% Similarity=0.108 Sum_probs=48.5
Q ss_pred CceEEEEcCCCc-EEEEeCCCCeEEEEeC----CCCCCCc-------cEEEecCCCCcccCCCCCccCccCCCcceEEEc
Q 013321 22 EPFSVAVSPSGE-LLVLDSENSNIYKIST----SLSPYSR-------PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD 89 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs~n~rI~kid~----dg~~~G~-------v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD 89 (445)
...+++++|+|. ++++-..++.|..++. .. ++ ...+.....+. ....+ .-.....|++.
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~v~~~~~s 117 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQE---GKKYWKLTIIAELRHPFALS-ASSGK-----TTNQVTCLAWS 117 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC---------CEEEEEEEEEECCCCCC------------CBCEEEEEEC
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCC---cccccccccccccccccccc-ccccC-----CCCceEEEEEc
Confidence 457899999999 8888777888888877 42 33 11121111000 00000 01145689999
Q ss_pred CCCCEEEEeCCCCEEEEEcCCC
Q 013321 90 DRGNIYIADTMNMAIRKISDTG 111 (445)
Q Consensus 90 ~dG~LYVAD~~N~rIrkfd~dG 111 (445)
++|.++++=..++.|+.++.++
T Consensus 118 ~~~~~l~~~~~dg~i~i~~~~~ 139 (425)
T 1r5m_A 118 HDGNSIVTGVENGELRLWNKTG 139 (425)
T ss_dssp TTSSEEEEEETTSCEEEEETTS
T ss_pred CCCCEEEEEeCCCeEEEEeCCC
Confidence 9998666655677899998766
No 158
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.07 E-value=5 Score=36.84 Aligned_cols=119 Identities=16% Similarity=0.097 Sum_probs=64.4
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
...+|+++|+|.++++-..++.|..++... ++.. .+.+. .....+++.+++.++++-.
T Consensus 217 ~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~---~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~~~~- 275 (340)
T 4aow_A 217 YLNTVTVSPDGSLCASGGKDGQAMLWDLNE---GKHLYTLDGG-----------------DIINALCFSPNRYWLCAAT- 275 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTT---TEEEEEEECS-----------------SCEEEEEECSSSSEEEEEE-
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEecc---CceeeeecCC-----------------ceEEeeecCCCCceeeccC-
Confidence 346788888888777777777888887652 2211 11111 1235777888777665543
Q ss_pred CCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC
Q 013321 101 NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 101 N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~ 167 (445)
.+.|+.+|..+...+..... ..........-..-.+++ ..++|.++++-...+.|+..++.
T Consensus 276 d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~h~~~v~~l~-~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 276 GPSIKIWDLEGKIIVDELKQ-----EVISTSSKAEPPQCTSLA-WSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp TTEEEEEETTTTEEEEEECC-----C-------CCCCCEEEEE-ECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCEEEEEECCCCeEEEeccc-----cceeeeccCCCCCEEEEE-ECCCCCEEEEEeCCCEEEEEeCC
Confidence 57788888655222211000 000000001111224444 57788777776667778877754
No 159
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.00 E-value=2.7 Score=40.57 Aligned_cols=114 Identities=11% Similarity=0.008 Sum_probs=66.4
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMN 101 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~N 101 (445)
..+|+++|+|.++++-..++.|..++... ++....... + -.....|++.+++. ++++-..+
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~---~~~~~~~~~------h---------~~~v~~v~~s~~~~~~~~s~~~d 203 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQ---KAVLKSYNA------H---------SSEVNCVAACPGKDTIFLSCGED 203 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTT---TEEEEEECC------C---------SSCEEEEEECTTCSSCEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCC---CcEEEEEcC------C---------CCCEEEEEEccCCCceeeeeccC
Confidence 47899999999888887888899888762 333222211 1 12345788888764 66666667
Q ss_pred CEEEEEcCCC-c--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 102 MAIRKISDTG-V--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 102 ~rIrkfd~dG-v--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
+.|+.+|... . ..+... ..-..+..+++.+.++.++++-..++.|+.+++...
T Consensus 204 g~v~~wd~~~~~~~~~~~~~---------------~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~ 259 (357)
T 4g56_B 204 GRILLWDTRKPKPATRIDFC---------------ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP 259 (357)
T ss_dssp SCEEECCTTSSSCBCBCCCT---------------TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG
T ss_pred CceEEEECCCCceeeeeeec---------------cccccccchhhhhcccceEEEeecccceeEEECCCC
Confidence 7888888432 1 111100 001123444443334556665555677777776543
No 160
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=90.99 E-value=3.3 Score=40.66 Aligned_cols=116 Identities=17% Similarity=0.216 Sum_probs=71.4
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....|+++|++.++++-..++.|..++... ++. ..+.|. -..-.+|+++++|.++++=..
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~---~~~~~~l~~h----------------~~~V~~v~~~~~~~~l~sgs~ 170 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYET---GDFERTLKGH----------------TDSVQDISFDHSGKLLASCSA 170 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTT---CCCCEEECCC----------------SSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCC---CcEEEEEecc----------------CCcEEEEEEcCCCCEEEEEeC
Confidence 356899999999999988899999998763 332 222211 112458999999998777667
Q ss_pred CCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 101 NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 101 N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
.+.|+.+|..+...+..- .+.. ..-.++. ..+++..+++-...+.|+.+++....+
T Consensus 171 D~~i~iwd~~~~~~~~~~-----~~h~---------~~V~~v~-~~p~~~~l~s~s~D~~i~~wd~~~~~~ 226 (410)
T 1vyh_C 171 DMTIKLWDFQGFECIRTM-----HGHD---------HNVSSVS-IMPNGDHIVSASRDKTIKMWEVQTGYC 226 (410)
T ss_dssp TSCCCEEETTSSCEEECC-----CCCS---------SCEEEEE-ECSSSSEEEEEETTSEEEEEETTTCCE
T ss_pred CCeEEEEeCCCCceeEEE-----cCCC---------CCEEEEE-EeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 788888886542221110 0100 0122333 455666666666667777777665444
No 161
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=90.88 E-value=11 Score=35.61 Aligned_cols=116 Identities=10% Similarity=0.057 Sum_probs=73.6
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
....+++.|+|.++++-..++.|..++... +........ + -....+|++.++|+++++=...
T Consensus 186 ~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~---~~~~~~~~~------h---------~~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGACDASAKLWDVRE---GMCRQTFTG------H---------ESDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---CSEEEEECC------C---------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCC---CeeEEEEcC------C---------cCCEEEEEEcCCCCEEEEEcCC
Confidence 457899999999888888888999888752 332221111 1 1134689999999988777778
Q ss_pred CEEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 102 MAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 102 ~rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
+.|+.+|... .......... .......+. ..++|.++++-..++.|+.++....
T Consensus 248 ~~v~iwd~~~~~~~~~~~~~~-------------~~~~v~~~~-~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 248 ATCRLFDLRADQELMTYSHDN-------------IICGITSVS-FSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp SCEEEEETTTTEEEEEECCTT-------------CCSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CcEEEEECCCCcEEEEEccCC-------------cccceEEEE-ECCCCCEEEEECCCCeEEEEEcccC
Confidence 8899999543 2221111000 001123343 5777888877777888888886543
No 162
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=90.85 E-value=10 Score=35.69 Aligned_cols=132 Identities=16% Similarity=0.120 Sum_probs=72.0
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
.....++++++| ++++-..++.|..++... ++........ .++.. .-.....|+++++|.++++-..
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~---~~~~~~~~~~---~~h~~------~~~~i~~i~~~~~~~~l~~~~~ 253 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELST---LRPLYNFESQ---HSMIN------NSNSIRSVKFSPQGSLLAIAHD 253 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTT---TEEEEEEECC---C---C------CCCCEEEEEECSSTTEEEEEEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCC---CceeEEEecc---ccccc------cCCccceEEECCCCCEEEEEec
Confidence 456899999999 888888889999999763 3332221110 00000 0113468999999987766555
Q ss_pred C---CEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc
Q 013321 101 N---MAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 101 N---~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~ 170 (445)
+ +.|+.+|.. + +..+.+.... .. ......+.-....++. ..+++.++++-..++.|+.+++....
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHS---SQ-ASLGEFAHSSWVMSLS-FNDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC------------CCBSBSSCEEEEE-ECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred CCCCceEEEEECCCCcccceeccCccc---cc-ccccccccCCcEEEEE-ECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 5 789999953 4 2333220000 00 0000000111223443 45666666666667778888776543
No 163
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=90.68 E-value=6.6 Score=37.80 Aligned_cols=73 Identities=11% Similarity=0.089 Sum_probs=47.5
Q ss_pred CceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCC-----CccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCC-CE
Q 013321 22 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPY-----SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG-NI 94 (445)
Q Consensus 22 ~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~-----G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG-~L 94 (445)
...+|++++ +++++++-..++.|..++...... ..+..+.+. -.....|++.++| ++
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~p~~~~~ 146 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH----------------TKRVGIVAWHPTAQNV 146 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC----------------SSCEEEEEECSSBTTE
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC----------------CCeEEEEEECcCCCCE
Confidence 357899999 888888888888888888763210 012222211 1234688999987 56
Q ss_pred EEEeCCCCEEEEEcCC
Q 013321 95 YIADTMNMAIRKISDT 110 (445)
Q Consensus 95 YVAD~~N~rIrkfd~d 110 (445)
+++=...+.|+.+|..
T Consensus 147 l~s~~~dg~i~iwd~~ 162 (402)
T 2aq5_A 147 LLSAGCDNVILVWDVG 162 (402)
T ss_dssp EEEEETTSCEEEEETT
T ss_pred EEEEcCCCEEEEEECC
Confidence 6655556778888844
No 164
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.63 E-value=5.7 Score=36.62 Aligned_cols=116 Identities=10% Similarity=0.071 Sum_probs=68.4
Q ss_pred CCceEEEEcCC---CcEEEEeCCCCeEEEEeCCCCCCCcc--EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEE
Q 013321 21 MEPFSVAVSPS---GELLVLDSENSNIYKISTSLSPYSRP--KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIY 95 (445)
Q Consensus 21 ~~P~gIAVdpd---G~LYVaDs~n~rI~kid~dg~~~G~v--~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LY 95 (445)
..-..|+++++ |+++++-..++.|..++.... +.. ..+.+. -.....|++.++|.++
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~h----------------~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS--GQTIPKAQQMH----------------TGPVLDVCWSDDGSKV 101 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT--SCEEEEEEEEC----------------SSCEEEEEECTTSSEE
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC--CceeEEEeccc----------------cCCEEEEEECcCCCEE
Confidence 34589999998 688888778888888887531 222 222221 1134589999999866
Q ss_pred EEeCCCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEE-CCCCeEEEEECCCCeEEEEECCCC
Q 013321 96 IADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV-GSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 96 VAD~~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~v-d~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
++=..++.|+.+|......+... +. -....++.+. .+++.++++-..++.|+.+++...
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~~~------~~---------~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQIA------QH---------DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEEEE------EC---------SSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS
T ss_pred EEEcCCCcEEEEEcCCCCceeec------cc---------cCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC
Confidence 65556788999986542221110 00 0011233221 566666666666677777776543
No 165
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=90.39 E-value=4.8 Score=39.48 Aligned_cols=113 Identities=17% Similarity=0.169 Sum_probs=68.3
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 102 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~ 102 (445)
..+|+++++|.++++-+.++.|..++..+ ++..... .++ -..-..|++.++|+++++=...+
T Consensus 153 V~~v~~~~~~~~l~sgs~D~~i~iwd~~~---~~~~~~~------~~h---------~~~V~~v~~~p~~~~l~s~s~D~ 214 (410)
T 1vyh_C 153 VQDISFDHSGKLLASCSADMTIKLWDFQG---FECIRTM------HGH---------DHNVSSVSIMPNGDHIVSASRDK 214 (410)
T ss_dssp EEEEEECTTSSEEEEEETTSCCCEEETTS---SCEEECC------CCC---------SSCEEEEEECSSSSEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCC---CceeEEE------cCC---------CCCEEEEEEeCCCCEEEEEeCCC
Confidence 46777777777777777777777777652 1211110 111 11245889999999777766788
Q ss_pred EEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 103 AIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 103 rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
.|+.+|.. | +.++.+.. ..-..+ ...+++.++++-...+.|+.+++....+
T Consensus 215 ~i~~wd~~~~~~~~~~~~h~-----------------~~v~~~-~~~~~g~~l~s~s~D~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 215 TIKMWEVQTGYCVKTFTGHR-----------------EWVRMV-RPNQDGTLIASCSNDQTVRVWVVATKEC 268 (410)
T ss_dssp EEEEEETTTCCEEEEEECCS-----------------SCEEEE-EECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred eEEEEECCCCcEEEEEeCCC-----------------ccEEEE-EECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 89999843 4 33332211 011223 3567777777777778888888765444
No 166
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.38 E-value=12 Score=35.35 Aligned_cols=113 Identities=10% Similarity=0.013 Sum_probs=71.2
Q ss_pred CceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
...+|++.+ +++++++-..++.|..++..+ ..+..+.+.. +. -.....|++.++|.++++=..
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~-~~------------~~~v~~~~~~~~~~~l~~~~~ 183 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSG---SVIQVFAKTD-SW------------DYWYCCVDVSVSRQMLATGDS 183 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTS---CEEEEEECCC-CS------------SCCEEEEEEETTTTEEEEEET
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCC---CceEEEeccC-CC------------CCCeEEEEECCCCCEEEEECC
Confidence 457889988 667777777788888888763 2333333321 00 123568999999997777667
Q ss_pred CCEEEEEcCCCc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCe-EEEEECCCCeEEEEECCC
Q 013321 101 NMAIRKISDTGV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 101 N~rIrkfd~dGv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~-LyVaD~gn~rIr~i~l~~ 168 (445)
++.|+.+|..+. .++.+.. ....++. ..+++. ++++-...+.|+.+++..
T Consensus 184 d~~i~i~d~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 184 TGRLLLLGLDGHEIFKEKLHK-----------------AKVTHAE-FNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp TSEEEEEETTSCEEEEEECSS-----------------SCEEEEE-ECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEECCCCEEEEeccCC-----------------CcEEEEE-ECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 889999997662 3332110 1223444 455565 666666677788887654
No 167
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=90.32 E-value=5.5 Score=37.71 Aligned_cols=73 Identities=7% Similarity=0.111 Sum_probs=49.5
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
...+|+++|+|+++++-..++.|..++... +......... + .......|++.++|.++++=..+
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~---~~~~~~~~~~----~---------~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRA---DQELMTYSHD----N---------IICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECCT----T---------CCSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCC---CcEEEEEccC----C---------cccceEEEEECCCCCEEEEECCC
Confidence 457888888888888887888888888652 2222221110 0 11234688999999988877778
Q ss_pred CEEEEEcCC
Q 013321 102 MAIRKISDT 110 (445)
Q Consensus 102 ~rIrkfd~d 110 (445)
+.|+.+|..
T Consensus 292 ~~i~vwd~~ 300 (340)
T 1got_B 292 FNCNVWDAL 300 (340)
T ss_dssp SEEEEEETT
T ss_pred CeEEEEEcc
Confidence 899999853
No 168
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=90.24 E-value=5 Score=43.29 Aligned_cols=122 Identities=9% Similarity=0.049 Sum_probs=74.6
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
....+|+.|++|+ |||+-. ++-|.+++..+ +++..+.-.. .+ + .-+....|+.|++|+|||+-.
T Consensus 406 ~~v~~i~~d~~g~~lWigt~-~~Gl~~~d~~~---~~~~~~~~~~-------~~-l---~~~~v~~i~~d~~g~lwigt~ 470 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTH-AGGLSILHRNS---GQVENFNQRN-------SQ-L---VNENVYAILPDGEGNLWLGTL 470 (795)
T ss_dssp SCEEEEEEETTTTEEEEEET-TTEEEEEETTT---CCEEEECTTT-------SC-C---SCSCEEEEEECSSSCEEEEES
T ss_pred ccEEEEEEcCCCCEEEEEeC-cCceeEEeCCC---CcEEEeecCC-------CC-c---CCCeeEEEEECCCCCEEEEec
Confidence 3457899999999 999854 35689998763 4444443210 00 0 113456899999999999976
Q ss_pred CCCEEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 100 MNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 100 ~N~rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
..|.+++... ..+..... . + +. ...-....+| +.|.+|.|||+.. +.|.+++.....+
T Consensus 471 --~Gl~~~~~~~~~~~~~~~~-~------~-~~-~~~~~~i~~i-~~d~~g~lWigt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 471 --SALVRFNPEQRSFTTIEKE-K------D-GT-PVVSKQITTL-FRDSHKRLWIGGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp --SCEEEEETTTTEEEECCBC-T------T-CC-BCCCCCEEEE-EECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred --CceeEEeCCCCeEEEcccc-c------c-cc-ccCCceEEEE-EECCCCCEEEEeC--CceEEEeCCCCeE
Confidence 4599999654 33321100 0 0 00 0001223455 4689999999986 4688888765444
No 169
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=90.24 E-value=8 Score=35.91 Aligned_cols=110 Identities=8% Similarity=0.066 Sum_probs=70.4
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
.-.+|+++|+|.++++-..++.|..++... +.. ..+.+.. ..-..+++.++|+++++=..
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~---~~~~~~~~~~~----------------~~v~~~~~~~~~~~l~s~s~ 75 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYET---QVEVRSIQVTE----------------TPVRAGKFIARKNWIIVGSD 75 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTT---TEEEEEEECCS----------------SCEEEEEEEGGGTEEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCC---CceeEEeeccC----------------CcEEEEEEeCCCCEEEEECC
Confidence 468999999999888888889999998763 222 2222210 01247788888887777667
Q ss_pred CCEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 101 NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 101 N~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
.+.|+.+|.. | +.++.+.. ..-.+|. ..+++.++++-...+.|+..++..
T Consensus 76 d~~i~vwd~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~l~sgs~D~~v~lWd~~~ 128 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDFEAHP-----------------DYIRSIA-VHPTKPYVLSGSDDLTVKLWNWEN 128 (304)
T ss_dssp TSEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEEGGG
T ss_pred CCEEEEEECCCCcEEEEEeCCC-----------------CcEEEEE-EcCCCCEEEEECCCCeEEEEECCC
Confidence 8889999853 4 23332210 0123343 466666666666677777777654
No 170
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=90.19 E-value=2.5 Score=39.50 Aligned_cols=115 Identities=8% Similarity=-0.035 Sum_probs=67.1
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
.-..++++++|+++++-..++.|..++........+..+.+. -....+|++.++|.++++=..+
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~~~~~d 73 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH----------------NGQVTGVDWAPDSNRIVTCGTD 73 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECC----------------SSCEEEEEEETTTTEEEEEETT
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC----------------CCcccEEEEeCCCCEEEEEcCC
Confidence 357899999999888887889999998763100022222221 1134689999999866665566
Q ss_pred CEEEEEcCC-Cc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 102 MAIRKISDT-GV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 102 ~rIrkfd~d-Gv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
+.|+.+|.. +. ........ -....++. ..+++.++++-..++.|+.+++..
T Consensus 74 g~i~vwd~~~~~~~~~~~~~~~---------------~~~v~~~~-~~~~~~~l~~~~~d~~v~i~d~~~ 127 (372)
T 1k8k_C 74 RNAYVWTLKGRTWKPTLVILRI---------------NRAARCVR-WAPNEKKFAVGSGSRVISICYFEQ 127 (372)
T ss_dssp SCEEEEEEETTEEEEEEECCCC---------------SSCEEEEE-ECTTSSEEEEEETTSSEEEEEEET
T ss_pred CeEEEEECCCCeeeeeEEeecC---------------CCceeEEE-ECCCCCEEEEEeCCCEEEEEEecC
Confidence 778888743 32 12211000 01223443 455665555555566777666544
No 171
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=90.08 E-value=9.6 Score=35.05 Aligned_cols=110 Identities=11% Similarity=0.041 Sum_probs=62.8
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
...+++++++|.++++-..++.|..++... ++....... -.....++++++|.++++-...
T Consensus 220 ~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 220 SISDMQFSPDLTYFITSSRDTNSFLVDVST---LQVLKKYET----------------DCPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---CCEEEEEEC----------------SSCEEEEEECSSSSEEEEEECC
T ss_pred ceeEEEECCCCCEEEEecCCceEEEEECCC---CceeeeecC----------------CCCceeEEecCCCceEEEeecC
Confidence 456788888777767666677787777652 222222111 1134578888888855443333
Q ss_pred C--------------EEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEE
Q 013321 102 M--------------AIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREI 164 (445)
Q Consensus 102 ~--------------rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i 164 (445)
. .|+.+|... +.++.+. -....++. ..+++.++++-...+.|+.+
T Consensus 281 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----------------~~~v~~~~-~s~~~~~l~s~~~dg~v~iw 342 (369)
T 3zwl_B 281 EAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH-----------------FGPLNTVA-ISPQGTSYASGGEDGFIRLH 342 (369)
T ss_dssp C-------------CEEEEEETTTCCEEEEEECC-----------------SSCEEEEE-ECTTSSEEEEEETTSEEEEE
T ss_pred CCceEEEEecCCCcceeEEEecCCCcchhheecc-----------------cCcEEEEE-ECCCCCEEEEEcCCCeEEEE
Confidence 3 566666432 1222110 11233444 56778777777777888888
Q ss_pred ECCC
Q 013321 165 QLHD 168 (445)
Q Consensus 165 ~l~~ 168 (445)
++..
T Consensus 343 ~~~~ 346 (369)
T 3zwl_B 343 HFEK 346 (369)
T ss_dssp EECH
T ss_pred ECcc
Confidence 8654
No 172
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=89.99 E-value=4.8 Score=38.01 Aligned_cols=109 Identities=9% Similarity=0.009 Sum_probs=67.6
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....++++++|.++++-..++.|..++... ++. ..+.+. -.....|++.++| ++++-..
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~----------------~~~i~~~~~~~~~-~l~~~~~ 308 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTLRIWHGGN---GNSQNCFYGH----------------SQSIVSASWVGDD-KVISCSM 308 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEECSSS---BSCSEEECCC----------------SSCEEEEEEETTT-EEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCC---CccceEecCC----------------CccEEEEEECCCC-EEEEEeC
Confidence 356788888887777777777888887652 222 222111 1134689999988 6666666
Q ss_pred CCEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 101 NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 101 N~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
.+.|+.+|.. + +.++.+.. ....++. ..+++.++++-..++.|+.+++..
T Consensus 309 d~~i~i~d~~~~~~~~~~~~~~-----------------~~i~~~~-~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 309 DGSVRLWSLKQNTLLALSIVDG-----------------VPIFAGR-ISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp TSEEEEEETTTTEEEEEEECTT-----------------CCEEEEE-ECTTSSEEEEEETTSCEEEEECHH
T ss_pred CCcEEEEECCCCcEeEecccCC-----------------ccEEEEE-EcCCCCEEEEEECCCeEEEEECCC
Confidence 8899999954 3 22221100 1223443 567777777767778888888754
No 173
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=89.69 E-value=8.3 Score=36.39 Aligned_cols=83 Identities=18% Similarity=0.159 Sum_probs=50.8
Q ss_pred CceEEEEcCCCcEEEEeCCC---CeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEE
Q 013321 22 EPFSVAVSPSGELLVLDSEN---SNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 97 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n---~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVA 97 (445)
....|+++++|.++++-..+ +.|..++... ++. ..+.+......-. -+ ..+.-.....|++.++|.++++
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~---~~~~~~~~~~~~~~~~~-~~--~~~~~~~v~~~~~~~~~~~l~~ 308 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF---GERIGSLSVPTHSSQAS-LG--EFAHSSWVMSLSFNDSGETLCS 308 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTT---CCEEEEECBC---------C--CBSBSSCEEEEEECSSSSEEEE
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCC---CcccceeccCccccccc-cc--ccccCCcEEEEEECCCCCEEEE
Confidence 46899999999987777666 8899998753 333 2222210000000 00 0001123468999999997777
Q ss_pred eCCCCEEEEEcCC
Q 013321 98 DTMNMAIRKISDT 110 (445)
Q Consensus 98 D~~N~rIrkfd~d 110 (445)
-..++.|+.+|..
T Consensus 309 ~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 309 AGWDGKLRFWDVK 321 (397)
T ss_dssp EETTSEEEEEETT
T ss_pred EeCCCeEEEEEcC
Confidence 6678899999954
No 174
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=89.48 E-value=19 Score=37.50 Aligned_cols=119 Identities=9% Similarity=0.071 Sum_probs=63.1
Q ss_pred CCceEEEEcCCCc-EEEEeCCC----CeEEEEeCCCCCCC-ccEEEecCCCCcccCCCCCccCccCCCcceEEEcC--CC
Q 013321 21 MEPFSVAVSPSGE-LLVLDSEN----SNIYKISTSLSPYS-RPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RG 92 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n----~rI~kid~dg~~~G-~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG 92 (445)
..+..++++|||. |+++.... ..|+.++..+ | ....+.... ... ..+...++++.+ +|
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~---g~~~~~~~~~~--~~~---------~~~~~~~~~~sp~~dg 323 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET---GRFVRTLFVET--DKH---------YVEPLHPLTFLPGSNN 323 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT---CCEEEEEEEEE--CSS---------CCCCCSCCEECTTCSS
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC---CceeeEEEEcc--CCC---------eECccCCceeecCCCC
Confidence 3467899999998 55543221 3788888763 4 344333211 000 111235778888 88
Q ss_pred CE-EEEeCC-CCEEEEEcCCC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCC----eEEE
Q 013321 93 NI-YIADTM-NMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQ----AIRE 163 (445)
Q Consensus 93 ~L-YVAD~~-N~rIrkfd~dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~----rIr~ 163 (445)
.+ |+++.. ..+|..++.+| +..+..+.. .-.+++..+++| .|+++...++ +|+.
T Consensus 324 ~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~-----------------~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 324 QFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEW-----------------EVTNFAGFDPKGTRLYFESTEASPLERHFYC 386 (706)
T ss_dssp EEEEEECTTSSCEEEEEETTSCEEEECCCSSS-----------------CEEEEEEECTTSSEEEEEESSSCTTCBEEEE
T ss_pred EEEEEEccCCccEEEEEECCCCEEEecCCCCe-----------------EEEeeeEEcCCCCEEEEEecCCCCceEEEEE
Confidence 74 444432 46788888555 233321110 011212345555 5666655543 7888
Q ss_pred EECCCCc
Q 013321 164 IQLHDDD 170 (445)
Q Consensus 164 i~l~~~~ 170 (445)
+++.+..
T Consensus 387 ~d~~~~~ 393 (706)
T 2z3z_A 387 IDIKGGK 393 (706)
T ss_dssp EETTCCC
T ss_pred EEcCCCC
Confidence 8776543
No 175
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.48 E-value=5.8 Score=39.00 Aligned_cols=81 Identities=10% Similarity=0.076 Sum_probs=48.1
Q ss_pred EEEEecCCCCCCCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEc
Q 013321 10 VETVFEGSKFGMEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD 89 (445)
Q Consensus 10 v~tv~~Gs~~g~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD 89 (445)
...+.........-..++++++|.++++-..++.|..++..+.. +..+ .++ -..-.+|++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~---~~~~-------~~h---------~~~v~~v~~~ 259 (435)
T 4e54_B 199 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE---LWNL-------RMH---------KKKVTHVALN 259 (435)
T ss_dssp EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB---CCCS-------BCC---------SSCEEEEEEC
T ss_pred eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce---eEEE-------ecc---------cceEEeeeec
Confidence 33333333333445678888888888888888888888876311 1111 111 1123578898
Q ss_pred CCCC-EEEEeCCCCEEEEEcC
Q 013321 90 DRGN-IYIADTMNMAIRKISD 109 (445)
Q Consensus 90 ~dG~-LYVAD~~N~rIrkfd~ 109 (445)
+++. ++++=...+.|+.+|.
T Consensus 260 p~~~~~~~s~s~d~~v~iwd~ 280 (435)
T 4e54_B 260 PCCDWFLATASVDQTVKIWDL 280 (435)
T ss_dssp TTCSSEEEEEETTSBCCEEET
T ss_pred CCCceEEEEecCcceeeEEec
Confidence 8776 5555445666777773
No 176
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=88.85 E-value=5.8 Score=38.01 Aligned_cols=108 Identities=14% Similarity=0.139 Sum_probs=60.0
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 102 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~ 102 (445)
..+|+++|+|.++++-..++.|+.++... ++...+.... ........+++.++|.++++=...+
T Consensus 243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~---~~~~~~~~~~-------------~~~~~~~~~~~s~~g~~l~~g~~d~ 306 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDATCRLYDLRA---DREVAIYSKE-------------SIIFGASSVDFSLSGRLLFAGYNDY 306 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEECCT-------------TCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEECCC---CcEEEEEcCC-------------CcccceeEEEEeCCCCEEEEEECCC
Confidence 45666666666666665666666666542 1111111110 0112345788999999777766678
Q ss_pred EEEEEcC-CC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEE
Q 013321 103 AIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREI 164 (445)
Q Consensus 103 rIrkfd~-dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i 164 (445)
.|+.+|. .+ +.++.+.. ....++. ..++|.++++-...+.|+..
T Consensus 307 ~i~vwd~~~~~~~~~l~~h~-----------------~~v~~l~-~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 307 TINVWDVLKGSRVSILFGHE-----------------NRVSTLR-VSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp CEEEEETTTCSEEEEECCCS-----------------SCEEEEE-ECTTSSCEEEEETTSEEEEE
T ss_pred cEEEEECCCCceEEEEECCC-----------------CcEEEEE-ECCCCCEEEEEcCCCCEEec
Confidence 8999984 44 23332110 1223444 46777776666666777654
No 177
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=88.71 E-value=5.8 Score=39.02 Aligned_cols=113 Identities=12% Similarity=0.088 Sum_probs=72.1
Q ss_pred CceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCc-cEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEe
Q 013321 22 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 98 (445)
Q Consensus 22 ~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~-v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 98 (445)
...+|++++ ++.++++...++.|+.++........ +..+.+. -..+..|++.++|. ++++=
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~----------------~~~v~~i~~~p~~~~~l~tg 296 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH----------------TAEVNCLSFNPYSEFILATG 296 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC----------------SSCEEEEEECSSCTTEEEEE
T ss_pred CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC----------------CCCeEEEEeCCCCCCEEEEE
Confidence 467899999 67899898889999999876321001 1222111 12467899999886 77766
Q ss_pred CCCCEEEEEcCCC----cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCC
Q 013321 99 TMNMAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 99 ~~N~rIrkfd~dG----v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~~ 168 (445)
...+.|+.+|... +.++.+.. ....+|. ..+++ .++++-...++|+.+++..
T Consensus 297 ~~dg~v~vwd~~~~~~~~~~~~~h~-----------------~~v~~i~-~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 297 SADKTVALWDLRNLKLKLHSFESHK-----------------DEIFQVQ-WSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ETTSEEEEEETTCTTSCSEEEECCS-----------------SCEEEEE-ECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred eCCCeEEEEeCCCCCCCeEEeecCC-----------------CCEEEEE-ECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 6678899998432 33432211 1223444 35555 6777777788888888765
No 178
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=88.53 E-value=17 Score=34.53 Aligned_cols=72 Identities=24% Similarity=0.285 Sum_probs=48.5
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....+|+++|+|.++++-..++.|..++.... ..+..+.+. -....+|++.++|.++++=..
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~~ 201 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDG--SNPRTLIGH----------------RATVTDIAIIDRGRNVLSASL 201 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CCCEEEECC----------------SSCEEEEEEETTTTEEEEEET
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCC--cCceEEcCC----------------CCcEEEEEEcCCCCEEEEEcC
Confidence 34678999999888888778888999987631 112222221 113458889988886666556
Q ss_pred CCEEEEEcCC
Q 013321 101 NMAIRKISDT 110 (445)
Q Consensus 101 N~rIrkfd~d 110 (445)
.+.|+.+|..
T Consensus 202 d~~v~iwd~~ 211 (420)
T 3vl1_A 202 DGTIRLWECG 211 (420)
T ss_dssp TSCEEEEETT
T ss_pred CCcEEEeECC
Confidence 6778888843
No 179
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=88.47 E-value=1.4 Score=47.37 Aligned_cols=61 Identities=13% Similarity=0.260 Sum_probs=45.1
Q ss_pred CCCceEEEEcCCCcEEEEeC------------CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEE
Q 013321 20 GMEPFSVAVSPSGELLVLDS------------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLA 87 (445)
Q Consensus 20 g~~P~gIAVdpdG~LYVaDs------------~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIa 87 (445)
+..|-.|+|++.|+|||+.- .|+.++.+++. .|++..++-.+.++ ..+|++
T Consensus 475 f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~---~g~~~rf~~~P~ga--------------E~TG~~ 537 (592)
T 3zwu_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA---TGEIRRFMVGPIGC--------------EVTGIS 537 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTT---TCCEEEEEECCTTC--------------EEEEEE
T ss_pred ccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCC---CCeEEEEEeCCCCc--------------cCcCee
Confidence 46899999999999999753 34677777765 36777776655322 456999
Q ss_pred EcCCCC-EEEE
Q 013321 88 VDDRGN-IYIA 97 (445)
Q Consensus 88 vD~dG~-LYVA 97 (445)
+++||. |||.
T Consensus 538 fspDg~tlfvn 548 (592)
T 3zwu_A 538 FSPDQKTLFVG 548 (592)
T ss_dssp ECTTSSEEEEE
T ss_pred ECCCCCEEEEE
Confidence 999987 6664
No 180
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=88.46 E-value=7.8 Score=38.07 Aligned_cols=122 Identities=12% Similarity=0.043 Sum_probs=70.9
Q ss_pred CCceEEEEcCC-CcEEEEeCCCCeEEEEeCCCCC--------CCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCC
Q 013321 21 MEPFSVAVSPS-GELLVLDSENSNIYKISTSLSP--------YSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR 91 (445)
Q Consensus 21 ~~P~gIAVdpd-G~LYVaDs~n~rI~kid~dg~~--------~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d 91 (445)
..+..|++.++ +.++++-..++.|..++..... ......+.+. -....+|+++++
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h----------------~~~v~~l~~~~~ 192 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH----------------QKEGYGLSWNPN 192 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC----------------SSCCCCEEECTT
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC----------------CCCeEEEEeCCC
Confidence 35789999996 6788888888889888865210 0111111111 123568999998
Q ss_pred CC-EEEEeCCCCEEEEEcCCC----cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEEC
Q 013321 92 GN-IYIADTMNMAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL 166 (445)
Q Consensus 92 G~-LYVAD~~N~rIrkfd~dG----v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l 166 (445)
+. ++++=...+.|+.++... ...+..... ....-....++.+...++.++++...++.|+.+++
T Consensus 193 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-----------~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~ 261 (430)
T 2xyi_A 193 LNGYLLSASDDHTICLWDINATPKEHRVIDAKNI-----------FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDT 261 (430)
T ss_dssp STTEEEEECTTSCEEEEETTSCCBGGGEEECSEE-----------ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred CCCeEEEEeCCCeEEEEeCCCCCCCCceecccee-----------ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 87 777666678888888543 111100000 00011123455543336677777777888888887
Q ss_pred CCC
Q 013321 167 HDD 169 (445)
Q Consensus 167 ~~~ 169 (445)
...
T Consensus 262 ~~~ 264 (430)
T 2xyi_A 262 RNN 264 (430)
T ss_dssp TCS
T ss_pred CCC
Confidence 643
No 181
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=88.45 E-value=6.6 Score=36.87 Aligned_cols=116 Identities=14% Similarity=0.097 Sum_probs=67.8
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
....++++|+|.++++-..++.|..++... ++....... -.....+++.++|.++++-. .
T Consensus 198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~---~~~~~~~~~----------------~~~v~~~~~sp~~~~la~~~-~ 257 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGKDGEIMLWNLAA---KKAMYTLSA----------------QDEVFSLAFSPNRYWLAAAT-A 257 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTT---TEEEEEEEC----------------CSCEEEEEECSSSSEEEEEE-T
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCC---CcEEEEecC----------------CCcEEEEEEcCCCCEEEEEc-C
Confidence 457889999999888888888899888763 222221111 01245899999998555433 3
Q ss_pred CEEEEEcCCCc---EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC
Q 013321 102 MAIRKISDTGV---TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 102 ~rIrkfd~dGv---~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~ 167 (445)
..|+.++.+.. ..+.....+. ..+.-....+++ ..++|..+++-...+.|+..++.
T Consensus 258 ~~i~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~~~-~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 258 TGIKVFSLDPQYLVDDLRPEFAGY---------SKAAEPHAVSLA-WSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp TEEEEEEETTEEEEEEECCCCTTC---------CGGGCCCEEEEE-ECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCcEEEEeCcCeeeeccCcccccc---------ccCcCcceeEEE-ECCCCCEEEEeecCceEEEEEEe
Confidence 44777765442 2221111000 000111234554 57888888877778888887753
No 182
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=88.20 E-value=4.7 Score=39.66 Aligned_cols=115 Identities=11% Similarity=0.026 Sum_probs=68.1
Q ss_pred CceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
.-.+|+++| +|+++++-+.++.|..++..+ +....+.... . .-..-..++++++|.++++=..
T Consensus 166 ~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~l~~g~~ 229 (435)
T 4e54_B 166 SITGLKFNPLNTNQFYASSMEGTTRLQDFKG---NILRVFASSD-T------------INIWFCSLDVSASSRMVVTGDN 229 (435)
T ss_dssp CCCEEEECSSCTTEEEEECSSSCEEEEETTS---CEEEEEECCS-S------------CSCCCCCEEEETTTTEEEEECS
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEeeccC---CceeEEeccC-C------------CCccEEEEEECCCCCEEEEEeC
Confidence 346889987 678888888888888888763 2333333221 0 0112357889999998877667
Q ss_pred CCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCC
Q 013321 101 NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 101 N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~~ 168 (445)
++.|+.+|.++..+... .+. -..-.+|. ..+++ .++++-...+.|+.+++..
T Consensus 230 dg~i~~wd~~~~~~~~~------~~h---------~~~v~~v~-~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 230 VGNVILLNMDGKELWNL------RMH---------KKKVTHVA-LNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp SSBEEEEESSSCBCCCS------BCC---------SSCEEEEE-ECTTCSSEEEEEETTSBCCEEETTT
T ss_pred CCcEeeeccCcceeEEE------ecc---------cceEEeee-ecCCCceEEEEecCcceeeEEeccc
Confidence 78899998765211100 000 01123444 34444 4666555667777777654
No 183
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=87.93 E-value=7.2 Score=38.41 Aligned_cols=117 Identities=13% Similarity=0.156 Sum_probs=63.7
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCC---CCEEEE
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR---GNIYIA 97 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d---G~LYVA 97 (445)
..+.+|+++|+|.++++-..++.|+.++......... .. ....+ ......+|++.++ |.++++
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~--~~---~~~~~---------h~~~v~~~~~sp~~~~~~~l~s 215 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKF--TQ---EPILG---------HVSMLTDVHLIKDSDGHQFIIT 215 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSC--CC---CCSEE---------CSSCEEEEEEEECTTSCEEEEE
T ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccc--cc---eeeec---------ccCceEEEEEcCCCCCCcEEEE
Confidence 4578999999988666666678898888652110000 00 00011 1224568999998 865554
Q ss_pred eCCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 98 DTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 98 D~~N~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
=...+.|+.+|.. + +.++..+. -....++++ . ++.++++-...+.|+.+++...
T Consensus 216 ~~~d~~i~vwd~~~~~~~~~~~~~h----------------~~~v~~~~~-s-d~~~l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 216 SDRDEHIKISHYPQCFIVDKWLFGH----------------KHFVSSICC-G-KDYLLLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp EETTSCEEEEEESCTTCEEEECCCC----------------SSCEEEEEE-C-STTEEEEEESSSEEEEEETTTC
T ss_pred EcCCCcEEEEECCCCceeeeeecCC----------------CCceEEEEE-C-CCCEEEEEeCCCeEEEEECCCC
Confidence 4456778888843 3 22221111 012234433 3 5555555556667777766543
No 184
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=87.45 E-value=16 Score=34.93 Aligned_cols=125 Identities=10% Similarity=-0.033 Sum_probs=73.4
Q ss_pred CceEEEEcCCCcEEEEeCCCCe-EEEEeCCCCCCCccE-EEe-cCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEe
Q 013321 22 EPFSVAVSPSGELLVLDSENSN-IYKISTSLSPYSRPK-LVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 98 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~r-I~kid~dg~~~G~v~-~va-G~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 98 (445)
....|+++|+|.++++-+.++. |..++... ++.. .+. |.. -..-..|+++++|.++++=
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~---~~~~~~~~~g~h---------------~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTED---GVLVREFRRGLD---------------RADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTT---CCEEEEEECTTC---------------CSCEEEEEECTTSCEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCC---CcEEEEEEcCCC---------------CCcEEEEEECCCCCEEEEE
Confidence 4579999999999998888887 88888763 3332 222 211 1134589999999988777
Q ss_pred CCCCEEEEEcCCC-----cEEEecCcccCCCCCCCCCccCcc--c----CCCceEEEECCCCeEEEEECCCCeEEEEECC
Q 013321 99 TMNMAIRKISDTG-----VTTIAGGKWSRGVGHVDGPSEDAK--F----SNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 99 ~~N~rIrkfd~dG-----v~tiaGg~~G~g~G~~dgp~~~a~--f----~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~ 167 (445)
...+.|+.+|... ...+.+-.. ..........+. + ..+..+++..++|..+++-..+++++.++..
T Consensus 259 s~d~~v~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 259 SDKWTLHVFEIFNDQDNKRHALKGWIN---MKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp ETTCEEEEEESSCCSCCCSEETTTTEE---CCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred ECCCEEEEEEccCCCCcccccccceee---ccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 7778899888432 111111000 000000000000 1 1112444568888877777778888887753
No 185
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=86.69 E-value=23 Score=34.00 Aligned_cols=29 Identities=21% Similarity=0.090 Sum_probs=23.7
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTS 50 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~d 50 (445)
....|+++++|.++++-..++.|..++..
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 46789999999887777778888888865
No 186
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=86.63 E-value=14 Score=34.97 Aligned_cols=120 Identities=8% Similarity=-0.022 Sum_probs=68.8
Q ss_pred CCceEEEEcCC-CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCC-CEEEEe
Q 013321 21 MEPFSVAVSPS-GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG-NIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdpd-G~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG-~LYVAD 98 (445)
....+|+++++ +.++++-..++.|..++... ++............++ -.....|++.++| .++++-
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~---~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~l~~~ 233 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKA---KKEVIHLSYTSPNSGI---------KQQLSVVEWHPKNSTRVATA 233 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTT---TEEEEEECCCCCSSCC---------CCCEEEEEECSSCTTEEEEE
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC---CCcceEEecccccccc---------CCceEEEEECCCCCCEEEEE
Confidence 34678999998 68888888889999999763 3333322221101010 1245689999987 455554
Q ss_pred CCCC---EEEEEcCCC----cEEEecCcccCCCCCCCCCccCcccCCCceEEEECC-CCeEEEEECCCCeEEEEECCCC
Q 013321 99 TMNM---AIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 99 ~~N~---rIrkfd~dG----v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~-dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
..++ .|+.+|... +.++.. ..-....++.+ .+ ++.++++-..++.|+.+++...
T Consensus 234 ~~d~~~~~i~~~d~~~~~~~~~~~~~----------------~~~~~v~~~~~-s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 234 TGSDNDPSILIWDLRNANTPLQTLNQ----------------GHQKGILSLDW-CHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp ECCSSSCCCCEEETTSTTSCSBCCCS----------------CCSSCEEEEEE-CSSCSSCEEEEESSSEEEEECSSSC
T ss_pred ECCCCCceEEEEeCCCCCCCcEEeec----------------CccCceeEEEe-CCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 4454 788888432 111110 00112334443 44 6666666666677777776553
No 187
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=86.59 E-value=24 Score=34.03 Aligned_cols=117 Identities=16% Similarity=0.204 Sum_probs=68.5
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD~~ 100 (445)
....|++.++|..+++-..++.|..++... ++....... -.....+++.+ +|.++++-..
T Consensus 167 ~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~---~~~~~~~~~----------------~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRT---GQCSLTLSI----------------EDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEEC----------------SSCEEEEEECSTTCCEEEEEET
T ss_pred CEEEEEEcCCCCEEEEecCCCcEEEEECCC---CeeEEEEEc----------------CCCcEEEEEECCCCCEEEEEcC
Confidence 356788888888777777788888887652 333222211 01245788887 7887777667
Q ss_pred CCEEEEEcCC-Cc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 101 NMAIRKISDT-GV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 101 N~rIrkfd~d-Gv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
.+.|+.+|.. +. ..+..... . ....-....++. ..++|.++++-...+.|+.+++..
T Consensus 228 d~~v~iwd~~~~~~~~~~~~~~~-~---------~~~h~~~v~~v~-~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 228 DRAVRVWDSETGFLVERLDSENE-S---------GTGHKDSVYSVV-FTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp TSCEEEEETTTCCEEEEEC----------------CCCSSCEEEEE-ECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCcEEEEECCCCcEEEeeccccc-C---------CCCCCCCEEEEE-ECCCCCEEEEEeCCCEEEEEECCC
Confidence 7889999854 32 22211000 0 000111234454 467777777777778888888754
No 188
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=86.34 E-value=21 Score=33.26 Aligned_cols=87 Identities=15% Similarity=0.128 Sum_probs=47.2
Q ss_pred CceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
...+|+++|+|. ++++-..++.|..++..... ..+..+.... +......-......-....+|++.++|.++++=..
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSRVKLWDVRRAS-GCLITLDQHN-GKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTCSS-CCSEECCTTT-TCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC-cccccccccc-cccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 356788888776 67676677788888765211 1122221110 00000000000111234568999999986666556
Q ss_pred CCEEEEEcCC
Q 013321 101 NMAIRKISDT 110 (445)
Q Consensus 101 N~rIrkfd~d 110 (445)
++.|+.+|..
T Consensus 266 dg~i~vwd~~ 275 (408)
T 4a11_B 266 DNRMRLWNSS 275 (408)
T ss_dssp TSCEEEEETT
T ss_pred CCeEEEEECC
Confidence 7789999854
No 189
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=86.22 E-value=21 Score=37.24 Aligned_cols=87 Identities=11% Similarity=0.137 Sum_probs=47.1
Q ss_pred CCCceEEEEcCCCc-EEEEeCCCC-----eEEEEeCCCCCCCccEEEecCCCCcc-c---CCCCCccC--ccC---CCcc
Q 013321 20 GMEPFSVAVSPSGE-LLVLDSENS-----NIYKISTSLSPYSRPKLVAGSPEGYY-G---HVDGRPRG--ARM---NHPK 84 (445)
Q Consensus 20 g~~P~gIAVdpdG~-LYVaDs~n~-----rI~kid~dg~~~G~v~~vaG~~~G~~-G---~~dG~~~~--a~L---n~P~ 84 (445)
+..+..++++|||. |+++....+ .|+.++..+ |+...+........ | ...+.... .++ ....
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS---GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT---CCEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC---CceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 35688999999998 444443244 899999874 44444432110000 0 00000000 000 1246
Q ss_pred eEEEcCCCC-EEEEeCCCCEEEEEcCCC
Q 013321 85 GLAVDDRGN-IYIADTMNMAIRKISDTG 111 (445)
Q Consensus 85 GIavD~dG~-LYVAD~~N~rIrkfd~dG 111 (445)
.+++.+||. |+++.. ..|+.+|.++
T Consensus 113 ~~~~SpDg~~l~~~~~--~~i~~~d~~~ 138 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG--GELYLYDLKQ 138 (741)
T ss_dssp CCEECTTSSEEEEEET--TEEEEEESSS
T ss_pred eeEECCCCCEEEEEeC--CcEEEEECCC
Confidence 889999998 555554 7788888543
No 190
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=86.10 E-value=14 Score=33.98 Aligned_cols=70 Identities=10% Similarity=0.013 Sum_probs=49.2
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEE--cCCCCEEEEeC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAV--DDRGNIYIADT 99 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIav--D~dG~LYVAD~ 99 (445)
....|+++++|.++++-..++.|..++... +....+.+. -....+|++ +++|.++++=.
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~---~~~~~~~~~----------------~~~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSS---NQAIQIAQH----------------DAPVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEEC----------------SSCEEEEEEEECSSCEEEEEEE
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCC---CCceeeccc----------------cCceEEEEEEeCCCCCEEEEcc
Confidence 467899999998878777888999998763 333333321 113457888 88888666666
Q ss_pred CCCEEEEEcCC
Q 013321 100 MNMAIRKISDT 110 (445)
Q Consensus 100 ~N~rIrkfd~d 110 (445)
.++.|+.+|..
T Consensus 149 ~dg~i~vwd~~ 159 (368)
T 3mmy_A 149 WDKTLKFWDTR 159 (368)
T ss_dssp TTSEEEEECSS
T ss_pred CCCcEEEEECC
Confidence 67889999843
No 191
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=85.90 E-value=25 Score=33.71 Aligned_cols=71 Identities=15% Similarity=0.092 Sum_probs=47.3
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC-
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT- 99 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~- 99 (445)
...+++++++|.++++-..++.|..++... +......... -.....|++.++|. |+++-.
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~---~~~~~~~~~~---------------~~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARS---SIPKFTKTNH---------------NAAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTC---SSEEEEECCC---------------SSCCCEEEECTTSTTEEEEECC
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCC---CCccEEecCC---------------cceEEEEEECCCCCCEEEEecC
Confidence 467889999888888877788888888763 2322221110 12346899998664 666643
Q ss_pred -CCCEEEEEcCC
Q 013321 100 -MNMAIRKISDT 110 (445)
Q Consensus 100 -~N~rIrkfd~d 110 (445)
.++.|+.+|..
T Consensus 281 s~d~~i~i~d~~ 292 (401)
T 4aez_A 281 TMDKQIHFWNAA 292 (401)
T ss_dssp TTTCEEEEEETT
T ss_pred CCCCEEEEEECC
Confidence 57889999954
No 192
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=85.76 E-value=17 Score=34.51 Aligned_cols=109 Identities=12% Similarity=0.157 Sum_probs=63.7
Q ss_pred EEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCCEEEE
Q 013321 27 AVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRK 106 (445)
Q Consensus 27 AVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~rIrk 106 (445)
++.++|+++++-..++.|..++... +....... + .-.....|++.++|.++++=..++.|+.
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~------~---------h~~~v~~~~~~~~~~~l~s~s~d~~i~i 165 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNF---NLQREIDQ------A---------HVSEITKLKFFPSGEALISSSQDMQLKI 165 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTS---CEEEEETT------S---------SSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEecCCCEEEEEECCCCEEEEeCCC---cceeeecc------c---------ccCccEEEEECCCCCEEEEEeCCCeEEE
Confidence 4566777777766777788777652 22222211 1 1123468999999987666666788999
Q ss_pred EcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 107 ISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 107 fd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
+|.. + +.++.+.. ....++. ..+++.++++-...+.|+.+++....+
T Consensus 166 wd~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 166 WSVKDGSNPRTLIGHR-----------------ATVTDIA-IIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp EETTTCCCCEEEECCS-----------------SCEEEEE-EETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred EeCCCCcCceEEcCCC-----------------CcEEEEE-EcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 9843 3 33332210 1123444 345566555555667777777765443
No 193
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=85.36 E-value=17 Score=32.70 Aligned_cols=71 Identities=10% Similarity=0.031 Sum_probs=45.2
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc--c-EEEecCCCCcccCCCCCccCccCCCcceEEEcC--CCCEEE
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR--P-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYI 96 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~--v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG~LYV 96 (445)
.-..|+++++|.++++-..++.|..++..... .. . ..+.+. -.....|++.+ +|.+++
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~~~----------------~~~v~~~~~~~~~d~~~l~ 75 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT-SNWELSDSWRAH----------------DSSIVAIDWASPEYGRIIA 75 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSS-CCEEEEEEEECC----------------SSCEEEEEECCGGGCSEEE
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC-CcceecceeccC----------------CCcEEEEEEcCCCCCCEEE
Confidence 46899999999988888788889888875311 11 1 111111 11345788887 477666
Q ss_pred EeCCCCEEEEEcC
Q 013321 97 ADTMNMAIRKISD 109 (445)
Q Consensus 97 AD~~N~rIrkfd~ 109 (445)
+=...+.|+.+|.
T Consensus 76 s~~~dg~v~vwd~ 88 (351)
T 3f3f_A 76 SASYDKTVKLWEE 88 (351)
T ss_dssp EEETTSCEEEEEE
T ss_pred EEcCCCeEEEEec
Confidence 5555667777773
No 194
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=85.33 E-value=16 Score=38.37 Aligned_cols=70 Identities=9% Similarity=0.037 Sum_probs=48.5
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
...+|+++|+|.++++-..++.|..++... +.. ..+.+.. ....++++.++|.++++=..
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~---~~~~~~~~~~~----------------~~v~~~~~s~~~~~l~~~~~ 75 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYET---QVEVRSIQVTE----------------TPVRAGKFIARKNWIIVGSD 75 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTT---TEEEEEEECCS----------------SCEEEEEEEGGGTEEEEEET
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCC---CceEEEEecCC----------------CcEEEEEEeCCCCEEEEEeC
Confidence 578999999999777777788999998652 333 2222211 12458899999885555445
Q ss_pred CCEEEEEcCC
Q 013321 101 NMAIRKISDT 110 (445)
Q Consensus 101 N~rIrkfd~d 110 (445)
++.|+.+|..
T Consensus 76 dg~i~vw~~~ 85 (814)
T 3mkq_A 76 DFRIRVFNYN 85 (814)
T ss_dssp TSEEEEEETT
T ss_pred CCeEEEEECC
Confidence 7889988843
No 195
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=85.27 E-value=9.9 Score=38.83 Aligned_cols=115 Identities=7% Similarity=-0.059 Sum_probs=64.6
Q ss_pred eEEEEcCCCcEEEE---eCCC-CeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEe
Q 013321 24 FSVAVSPSGELLVL---DSEN-SNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 98 (445)
Q Consensus 24 ~gIAVdpdG~LYVa---Ds~n-~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 98 (445)
..++++|||..+++ |..+ ..|++++..+ |+...+.+.. .....+++.|||. |+.++
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~---g~~~~l~~~~----------------~~~~~~~~SpDG~~l~~~~ 213 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS---GGLRVFDSGE----------------GSFSSASISPGMKVTAGLE 213 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTT---CCCEEECCSS----------------CEEEEEEECTTSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC---CCceEeecCC----------------CccccceECCCCCEEEEcc
Confidence 68899999986552 2222 5688888764 5555554321 1225889999998 55455
Q ss_pred CCC-CEEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEEC
Q 013321 99 TMN-MAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL 166 (445)
Q Consensus 99 ~~N-~rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l 166 (445)
... .+|+++|.++ ...+..+.. +....+. . ..+... +.+++|.|+++-..+++++.+..
T Consensus 214 ~~~~~~i~~~d~~~~~~~~~~~~~----~~~~~~~---~-~~~~~~-~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 214 TAREARLVTVDPRDGSVEDLELPS----KDFSSYR---P-TAITWL-GYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSSCEEEEEECTTTCCEEECCCSC----SHHHHHC---C-SEEEEE-EECTTSCEEEEEEETTEEEEEET
T ss_pred CCCeeEEEEEcCCCCcEEEccCCC----cChhhhh---h-ccccce-eEcCCCcEEEEEEcCCcEEEEEE
Confidence 432 3899999655 222221110 0000000 0 011111 24677788877776777877776
No 196
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=85.25 E-value=6.2 Score=36.33 Aligned_cols=112 Identities=11% Similarity=-0.023 Sum_probs=67.4
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc----cEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEE
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR----PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYI 96 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~----v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYV 96 (445)
...+++++++|.++++-..++.|..++... +. +..+.+. -.....|++.++|. +++
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~---~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~l~ 73 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDI---QAKNVDLLQSLRY----------------KHPLLCCNFIDNTDLQIY 73 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEET---TTTEEEEEEEEEC----------------SSCEEEEEEEESSSEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCC---CCccccceeeeec----------------CCceEEEEECCCCCcEEE
Confidence 467999999999777777788888887653 22 2222221 12346899999998 555
Q ss_pred EeCCCCEEEEEcC-CC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 97 ADTMNMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 97 AD~~N~rIrkfd~-dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
+=..++.|+.+|. .. ......+. .. -....++.+. + +.++++-...+.|+.+++..
T Consensus 74 ~~~~dg~i~~wd~~~~~~~~~~~~~-----~~---------~~~v~~l~~~-~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 74 VGTVQGEILKVDLIGSPSFQALTNN-----EA---------NLGICRICKY-G-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp EEETTSCEEEECSSSSSSEEECBSC-----CC---------CSCEEEEEEE-T-TTEEEEEETTSEEEEECHHH
T ss_pred EEcCCCeEEEEEeccCCceEecccc-----CC---------CCceEEEEeC-C-CCEEEEEcCCCeEEEEcccc
Confidence 5445778999986 54 22111110 00 0122344443 3 55666666678888887653
No 197
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=85.08 E-value=16 Score=33.87 Aligned_cols=68 Identities=6% Similarity=0.029 Sum_probs=46.5
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
-..+++.++|+++++-..++.|..++... ++.. .+.+. -..-..|++.+++.++++=...
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~---~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~sgs~D 118 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNT---GEKVVDFEAH----------------PDYIRSIAVHPTKPYVLSGSDD 118 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTT---CCEEEEEECC----------------SSCEEEEEECSSSSEEEEEETT
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCC---CcEEEEEeCC----------------CCcEEEEEEcCCCCEEEEECCC
Confidence 35778888888888877788888888763 3322 22221 1123588999999877776667
Q ss_pred CEEEEEcC
Q 013321 102 MAIRKISD 109 (445)
Q Consensus 102 ~rIrkfd~ 109 (445)
+.|+..|.
T Consensus 119 ~~v~lWd~ 126 (304)
T 2ynn_A 119 LTVKLWNW 126 (304)
T ss_dssp SCEEEEEG
T ss_pred CeEEEEEC
Confidence 88888884
No 198
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=84.97 E-value=7.9 Score=36.76 Aligned_cols=112 Identities=19% Similarity=0.173 Sum_probs=64.1
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE--EEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK--LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~--~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
.-..|+++|+|.++++-..++.|..++..+ +... .... .|+ -..-..|++.++|.++++=.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~---~~~~~~~~~~-----~~h---------~~~v~~~~~sp~g~~l~s~s 80 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEG---DSWICKSVLS-----EGH---------QRTVRKVAWSPCGNYLASAS 80 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEET---TEEEEEEEEC-----SSC---------SSCEEEEEECTTSSEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCC---Ccceeeeeec-----ccc---------CCcEEEEEECCCCCEEEEEE
Confidence 356899999999988888888888887652 2211 1111 111 11235899999998666555
Q ss_pred CCCEEEEEcCC-C----cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 100 MNMAIRKISDT-G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 100 ~N~rIrkfd~d-G----v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
..+.|+..+.+ + +.++.+.. ..-.++. ..+++.++++-...+.|+..++..
T Consensus 81 ~D~~v~iw~~~~~~~~~~~~~~~h~-----------------~~v~~v~-~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 81 FDATTCIWKKNQDDFECVTTLEGHE-----------------NEVKSVA-WAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp TTSCEEEEEECCC-EEEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEEECT
T ss_pred CCCcEEEEEccCCCeEEEEEccCCC-----------------CCceEEE-EeCCCCEEEEEECCCeEEEEECCC
Confidence 55666666532 2 12221110 0122333 355666666655666677666543
No 199
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=84.89 E-value=19 Score=33.03 Aligned_cols=115 Identities=10% Similarity=0.031 Sum_probs=70.6
Q ss_pred CceEEEEcCC----CcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEE
Q 013321 22 EPFSVAVSPS----GELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIY 95 (445)
Q Consensus 22 ~P~gIAVdpd----G~LYVaDs~n~rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LY 95 (445)
....+++.++ |.++++-..++.|..++... ++.. .+.+. -....+|++.+ ++.++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~---~~~~~~~~~~----------------~~~i~~~~~~~~~~~~l 131 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT---MQCIKHYVGH----------------GNAINELKFHPRDPNLL 131 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT---CCEEEEEESC----------------CSCEEEEEECSSCTTEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh---ceEeeeecCC----------------CCcEEEEEECCCCCCEE
Confidence 4678889887 66778777888999998763 3332 22221 11346889998 88877
Q ss_pred EEeCCCCEEEEEcCC-CcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 96 IADTMNMAIRKISDT-GVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 96 VAD~~N~rIrkfd~d-Gv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
++=..++.|+.+|.. +......... ...-....++. ..+++.++++-..++.|+.+++..
T Consensus 132 ~s~~~dg~i~iwd~~~~~~~~~~~~~------------~~~~~~v~~~~-~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 132 LSVSKDHALRLWNIQTDTLVAIFGGV------------EGHRDEVLSAD-YDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECST------------TSCSSCEEEEE-ECTTSSEEEEEETTSCEEEEESCS
T ss_pred EEEeCCCeEEEEEeecCeEEEEeccc------------ccccCceeEEE-ECCCCCEEEEecCCCCEEEEECCC
Confidence 665567789999854 3221111000 00011234454 466777776666778899998765
No 200
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=84.67 E-value=4.2 Score=42.31 Aligned_cols=74 Identities=9% Similarity=0.070 Sum_probs=46.3
Q ss_pred cceEEEcCCCCEEEEeCCCCEEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeE
Q 013321 83 PKGLAVDDRGNIYIADTMNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAI 161 (445)
Q Consensus 83 P~GIavD~dG~LYVAD~~N~rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rI 161 (445)
...|++.++|.++++-...+.|+.++... ...+.....+ + .-..-.+++ ..++|.++++-...+.|
T Consensus 494 v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~---~---------H~~~V~~v~-fspdg~~lasgs~D~~v 560 (611)
T 1nr0_A 494 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWT---F---------HTAKVACVS-WSPDNVRLATGSLDNSV 560 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCC---C---------CSSCEEEEE-ECTTSSEEEEEETTSCE
T ss_pred eEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeee---e---------cccceeEEE-ECCCCCEEEEEECCCcE
Confidence 46899999999777666677888888532 1111000000 0 011234554 57888888887778889
Q ss_pred EEEECCCC
Q 013321 162 REIQLHDD 169 (445)
Q Consensus 162 r~i~l~~~ 169 (445)
+..++...
T Consensus 561 ~lW~~~~~ 568 (611)
T 1nr0_A 561 IVWNMNKP 568 (611)
T ss_dssp EEEETTCT
T ss_pred EEEECCCc
Confidence 99988653
No 201
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=84.65 E-value=42 Score=37.51 Aligned_cols=71 Identities=7% Similarity=0.069 Sum_probs=50.2
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
.-.+++++++|.++++-..++.|..++... ++...... ++ -....+|+++++|.++++=..+
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~---~~~~~~~~------~h---------~~~v~~~~~s~~~~~l~s~~~d 678 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADKTLQVFKAET---GEKLLDIK------AH---------EDEVLCCAFSSDDSYIATCSAD 678 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---CCEEEEEC------CC---------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCC---CCEEEEec------cC---------CCCEEEEEEecCCCEEEEEeCC
Confidence 457899999999888888888999998763 33222211 11 1134689999999877666667
Q ss_pred CEEEEEcCC
Q 013321 102 MAIRKISDT 110 (445)
Q Consensus 102 ~rIrkfd~d 110 (445)
+.|+.+|..
T Consensus 679 ~~v~vwd~~ 687 (1249)
T 3sfz_A 679 KKVKIWDSA 687 (1249)
T ss_dssp SEEEEEETT
T ss_pred CeEEEEECC
Confidence 889999853
No 202
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=84.28 E-value=43 Score=34.98 Aligned_cols=70 Identities=11% Similarity=0.109 Sum_probs=50.0
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
-.+|+++++|.++++-+.++.|+.++... +... .+.+. -..-.+|++.++|.++++=...
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~---~~~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~s~D 493 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAA---GVSTRRFVGH----------------TKDVLSVAFSLDNRQIVSASRD 493 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEECC----------------SSCEEEEEECTTSSCEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCC---CcceeEEeCC----------------CCCEEEEEEeCCCCEEEEEeCC
Confidence 56889999999888888889999998763 3322 22221 1123588999999877766667
Q ss_pred CEEEEEcCCC
Q 013321 102 MAIRKISDTG 111 (445)
Q Consensus 102 ~rIrkfd~dG 111 (445)
+.|+..|..+
T Consensus 494 ~~i~iwd~~~ 503 (694)
T 3dm0_A 494 RTIKLWNTLG 503 (694)
T ss_dssp SCEEEECTTS
T ss_pred CEEEEEECCC
Confidence 8899998765
No 203
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=83.94 E-value=27 Score=32.74 Aligned_cols=115 Identities=10% Similarity=0.010 Sum_probs=64.9
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE--EEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK--LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~--~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
....++++|+|.++++-..++.|..++... ++.. .+.+. + -..-..|++.++|.++++=.
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~---~~~~~~~~~~~------h---------~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSS---PDQASSRFPVD------E---------EAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSC---TTSCCEECCCC------T---------TSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCC---CCCCccEEecc------C---------CCCEEEEEEeCCCCEEEEEe
Confidence 356889999988888877888888888763 2211 22110 0 12346899999998555433
Q ss_pred CCCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECC-CCeEEEEECCC
Q 013321 100 MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-NQAIREIQLHD 168 (445)
Q Consensus 100 ~N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~g-n~rIr~i~l~~ 168 (445)
.+ .|+.+|... +.++..-. . ....... ..+. .+++|.++++-.+ ++.|+.++.+.
T Consensus 234 ~~-~v~iwd~~~~~~~~~~~~~~--------~---~~~~~~~-~~~~-~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 234 DQ-TVVCFDLRKDVGTLAYPTYT--------I---PEFKTGT-VTYD-IDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp SS-BEEEEETTSSTTCBSSCCCB--------C--------CC-EEEE-ECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CC-eEEEEEcCCCCcceeecccc--------c---ccccccc-eEEE-ECCCCCEEEEecCCCCcEEEEEEcc
Confidence 33 899998543 11111000 0 0000111 2344 5777876666444 67788877643
No 204
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=83.84 E-value=33 Score=34.22 Aligned_cols=75 Identities=5% Similarity=-0.037 Sum_probs=49.2
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCC-CCEEEEe
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d-G~LYVAD 98 (445)
.....++++++|. ++++-..++.|..++... ++........ .++ -.....+++.++ |+++++=
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~---~~~~~~~~~~------~~~------~~~v~~~~~~~~~~~~l~~~ 225 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPP---FKFSASDRTH------HKQ------GSFVRDVEFSPDSGEFVITV 225 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTT---BEEEEEECSS------SCT------TCCEEEEEECSTTCCEEEEE
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC---cceeeeeccc------CCC------CceEEEEEECCCCCCEEEEE
Confidence 3467899999887 777777888999998652 3332222111 000 003458999999 8876665
Q ss_pred CCCCEEEEEcCC
Q 013321 99 TMNMAIRKISDT 110 (445)
Q Consensus 99 ~~N~rIrkfd~d 110 (445)
..++.|+.+|..
T Consensus 226 ~~dg~i~vwd~~ 237 (615)
T 1pgu_A 226 GSDRKISCFDGK 237 (615)
T ss_dssp ETTCCEEEEETT
T ss_pred eCCCeEEEEECC
Confidence 567889999843
No 205
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=83.77 E-value=4.5 Score=39.17 Aligned_cols=70 Identities=17% Similarity=0.100 Sum_probs=50.8
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
.-..|+++|+|.++++-+.++.|..++... +++....- .|+ -..-.+|++.|||.++++=...
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~V~iwd~~~---~~~~~~~~-----~gH---------~~~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNSIALVKLKD---LSMSKIFK-----QAH---------SFAITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTT---TEEEEEET-----TSS---------SSCEEEEEECTTSCEEEEEETT
T ss_pred CeEeEEECCCCCceEEEcCCCEEEEEECCC---CcEEEEec-----Ccc---------cCCEEEEEECCCCCEEEEEeCC
Confidence 357899999999988888888999998762 33322111 111 1234699999999988887778
Q ss_pred CEEEEEc
Q 013321 102 MAIRKIS 108 (445)
Q Consensus 102 ~rIrkfd 108 (445)
+.|++++
T Consensus 334 ~tvrvw~ 340 (365)
T 4h5i_A 334 NTIHIIK 340 (365)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 8899888
No 206
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=83.76 E-value=23 Score=33.46 Aligned_cols=112 Identities=19% Similarity=0.189 Sum_probs=66.4
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
...+|+++|+|+++++-..++.|..++............... + -..-..|++.++|.++++=...
T Consensus 107 ~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~------h---------~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 107 EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS------H---------TQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC------C---------CSCEEEEEECSSSSCEEEEETT
T ss_pred CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC------c---------CCCeEEEEECCCCCEEEEEeCC
Confidence 457899999999888888888888887652110011111111 0 1123578899999866665566
Q ss_pred CEEEEEcCCC-c----EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEEC
Q 013321 102 MAIRKISDTG-V----TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL 166 (445)
Q Consensus 102 ~rIrkfd~dG-v----~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l 166 (445)
+.|+.++... . .++.+ . -..-.+|. ..++|.++++-...+.|+..+.
T Consensus 172 ~~i~~w~~~~~~~~~~~~~~~--------h---------~~~v~~l~-~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 172 DTVKLYREEEDDWVCCATLEG--------H---------ESTVWSLA-FDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECC--------C---------SSCEEEEE-ECTTSSEEEEEETTSCEEEEEE
T ss_pred CcEEEEEecCCCEEEEEEecC--------C---------CCceEEEE-ECCCCCEEEEEeCCCeEEEecc
Confidence 7788887432 1 12211 0 01224454 4777877777666777777764
No 207
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=83.34 E-value=40 Score=35.32 Aligned_cols=72 Identities=10% Similarity=-0.004 Sum_probs=47.3
Q ss_pred CceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC--CCCEEEEe
Q 013321 22 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYIAD 98 (445)
Q Consensus 22 ~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG~LYVAD 98 (445)
....++++| +|.++++-..++.|..++.... .....+.... -.....+++.+ +|.++++=
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~--~~~~~~~~~~---------------~~~v~~~~~~~~~~~~~l~~~ 204 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS--TPNFTLTTGQ---------------ERGVNYVDYYPLPDKPYMITA 204 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEETTCS--SCSEEEECCC---------------TTCCCEEEECCSTTCCEEEEE
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cceeEEecCC---------------CCCEEEEEEEECCCCCEEEEE
Confidence 457888988 7778887777888888886531 1122222110 12345778877 88877776
Q ss_pred CCCCEEEEEcCC
Q 013321 99 TMNMAIRKISDT 110 (445)
Q Consensus 99 ~~N~rIrkfd~d 110 (445)
..++.|+.+|..
T Consensus 205 ~~dg~i~~~d~~ 216 (814)
T 3mkq_A 205 SDDLTIKIWDYQ 216 (814)
T ss_dssp CTTSEEEEEETT
T ss_pred eCCCEEEEEECC
Confidence 778889999854
No 208
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=83.13 E-value=8.6 Score=37.10 Aligned_cols=70 Identities=11% Similarity=0.102 Sum_probs=48.0
Q ss_pred cceEEEcCCCCEEEEeCCCCEEEEEcCC-Cc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCC
Q 013321 83 PKGLAVDDRGNIYIADTMNMAIRKISDT-GV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 159 (445)
Q Consensus 83 P~GIavD~dG~LYVAD~~N~rIrkfd~d-Gv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~ 159 (445)
-..|++.++|.++++=...+.|+.+|.. +. .++..+. -..-++|+ ..++|.++++-...+
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH----------------~~~V~~v~-fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH----------------SFAITEVT-ISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS----------------SSCEEEEE-ECTTSCEEEEEETTS
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc----------------cCCEEEEE-ECCCCCEEEEEeCCC
Confidence 3589999999977765567789999954 42 2221111 11234555 588999999888899
Q ss_pred eEEEEECCCC
Q 013321 160 AIREIQLHDD 169 (445)
Q Consensus 160 rIr~i~l~~~ 169 (445)
.|+.+++...
T Consensus 335 tvrvw~ip~~ 344 (365)
T 4h5i_A 335 TIHIIKLPLN 344 (365)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEcCCC
Confidence 9999997643
No 209
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=83.04 E-value=31 Score=32.31 Aligned_cols=115 Identities=8% Similarity=-0.026 Sum_probs=72.1
Q ss_pred CceEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 22 EPFSVAVSP--SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 22 ~P~gIAVdp--dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
....++++| +|+++++-..++.|..++... ++...+.... .-.....+++.++|.++++=.
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~---~~~~~~~~~~--------------~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYED---DSQYIVHSAK--------------SDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSS---SCEEEEECCC--------------SSCCCCEEEECTTSCEEEEEC
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC---CcEEEEEecC--------------CCCceEEEEECCCCCEEEEEc
Confidence 467899999 999998888889999998763 3333322111 011246899999999888766
Q ss_pred CCCEEEEEcCC-C--c-EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 100 MNMAIRKISDT-G--V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 100 ~N~rIrkfd~d-G--v-~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
.++.|+.+|.. + + .++.++. -....+|. ..++|.++++-..+ .|+.+++....+
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h----------------~~~v~~l~-fs~~g~~l~s~~~~-~v~iwd~~~~~~ 247 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDE----------------EAKIKEVK-FADNGYWMVVECDQ-TVVCFDLRKDVG 247 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCT----------------TSCEEEEE-ECTTSSEEEEEESS-BEEEEETTSSTT
T ss_pred CCCEEEEEECCCCCCCccEEeccC----------------CCCEEEEE-EeCCCCEEEEEeCC-eEEEEEcCCCCc
Confidence 67889999954 3 2 2321100 01223444 46677655554444 899999876543
No 210
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=82.97 E-value=32 Score=32.43 Aligned_cols=115 Identities=8% Similarity=0.040 Sum_probs=66.6
Q ss_pred CceEEEEcCCC-cEEEEeCCCC---eEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEE
Q 013321 22 EPFSVAVSPSG-ELLVLDSENS---NIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 96 (445)
Q Consensus 22 ~P~gIAVdpdG-~LYVaDs~n~---rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYV 96 (445)
....++++|+| .++++-..++ .|..++..... .....+. .+ .-.....|++.+ +|.+++
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~------~~---------~~~~v~~~~~s~~~~~~l~ 279 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-TPLQTLN------QG---------HQKGILSLDWCHQDEHLLL 279 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-SCSBCCC------SC---------CSSCEEEEEECSSCSSCEE
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-CCcEEee------cC---------ccCceeEEEeCCCCCCeEE
Confidence 45677777765 4555555555 67777654210 0000000 00 112356899998 888777
Q ss_pred EeCCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCc
Q 013321 97 ADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 97 AD~~N~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG-~LyVaD~gn~rIr~i~l~~~~ 170 (445)
+=..++.|+.+|.. + +.++.+.. ....++. ..+++ .++++-...+.|+.+++....
T Consensus 280 s~~~dg~v~~wd~~~~~~~~~~~~~~-----------------~~v~~~~-~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 280 SSGRDNTVLLWNPESAEQLSQFPARG-----------------NWCFKTK-FAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EEESSSEEEEECSSSCCEEEEEECSS-----------------SCCCCEE-ECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred EEeCCCCEEEeeCCCCccceeecCCC-----------------CceEEEE-ECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 66668899999954 3 23332210 1223444 45666 788877778899999876543
No 211
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=82.65 E-value=23 Score=33.90 Aligned_cols=141 Identities=12% Similarity=0.114 Sum_probs=72.0
Q ss_pred CCceEEEEcCCC-cEEEEeCCCCeEEEEeCCCCCC--CccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEE
Q 013321 21 MEPFSVAVSPSG-ELLVLDSENSNIYKISTSLSPY--SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 97 (445)
Q Consensus 21 ~~P~gIAVdpdG-~LYVaDs~n~rI~kid~dg~~~--G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVA 97 (445)
.....++++|+| +++++-..++.|..++...... ..+..+.+.. .. . ...........-..|++.++|.++++
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~v~~~~~s~~g~~l~~ 302 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPE-DP-S--NRSFFSEIISSISDVKFSHSGRYMMT 302 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC---------CCHHHHHTTCEEEEEECTTSSEEEE
T ss_pred cceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCC-Cc-c--ccccccccCceEEEEEECCCCCEEEE
Confidence 346899999998 8888888889999998763210 0023332221 00 0 00000000113468999999996665
Q ss_pred eCCCCEEEEEcCC--C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 98 DTMNMAIRKISDT--G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 98 D~~N~rIrkfd~d--G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
=.. +.|+.+|.. + +.++.+..... ...........+...+.+. ..+++..+++-..++.|+.+++...
T Consensus 303 ~~~-~~v~iwd~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~i~~~~~~~-~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 303 RDY-LSVKVWDLNMENRPVETYQVHEYLR--SKLCSLYENDCIFDKFECC-WNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp EES-SEEEEEETTCCSSCSCCEESCGGGT--TTHHHHHHTSGGGCCCCEE-ECTTSSEEEEECSTTEEEEEETTTC
T ss_pred eeC-CeEEEEeCCCCccccceeecccccc--ccccccccccccccceEEE-ECCCCCEEEEeccCCEEEEEEcCCC
Confidence 555 889999853 3 33333221000 0000000000111122343 4566666666666777777776553
No 212
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.47 E-value=25 Score=30.85 Aligned_cols=73 Identities=23% Similarity=0.260 Sum_probs=45.4
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC-
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT- 99 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~- 99 (445)
...+++++|+|.++++.. ++.|++++..+. ++...+.... .-....++++.++|. |+++..
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~--~~~~~~~~~~--------------~~~~~~~~~~spdg~~l~~~~~~ 105 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD--PSPEKVDTGF--------------ATICNNDHGISPDGALYAISDKV 105 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSC--CSCEECCCTT--------------CCCBCSCCEECTTSSEEEEEECT
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCC--CCceEecccc--------------ccccccceEECCCCCEEEEEEeC
Confidence 578999999999666654 678999987630 2233222110 012346789999998 444442
Q ss_pred --CCCEEEEEcCCC
Q 013321 100 --MNMAIRKISDTG 111 (445)
Q Consensus 100 --~N~rIrkfd~dG 111 (445)
...+|..++..+
T Consensus 106 ~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 106 EFGKSAIYLLPSTG 119 (297)
T ss_dssp TTSSCEEEEEETTC
T ss_pred CCCcceEEEEECCC
Confidence 357888887544
No 213
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=82.36 E-value=38 Score=32.85 Aligned_cols=114 Identities=10% Similarity=0.013 Sum_probs=61.1
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
....++++++|..+++-..++.|..++... ++........ -.....++++ +..+++=...
T Consensus 312 ~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~---~~~~~~~~~h---------------~~~v~~~~~~--~~~l~s~s~d 371 (464)
T 3v7d_B 312 RIYSTIYDHERKRCISASMDTTIRIWDLEN---GELMYTLQGH---------------TALVGLLRLS--DKFLVSAAAD 371 (464)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTT---TEEEEEECCC---------------SSCEEEEEEC--SSEEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCC---CcEEEEEeCC---------------CCcEEEEEEc--CCEEEEEeCC
Confidence 356777777777777776777777777652 3322221110 1123466665 4555554456
Q ss_pred CEEEEEcCCC-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee
Q 013321 102 MAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 173 (445)
Q Consensus 102 ~rIrkfd~dG-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~ 173 (445)
+.|+.+|... ........ ..+..+++..+++.++++-. .+.|+.+++....+..
T Consensus 372 g~v~vwd~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 372 GSIRGWDANDYSRKFSYHH-----------------TNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp SEEEEEETTTCCEEEEEEC-----------------TTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred CcEEEEECCCCceeeeecC-----------------CCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 7788888543 22222110 01112223455666655544 6788888877655543
No 214
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=82.06 E-value=40 Score=32.95 Aligned_cols=122 Identities=9% Similarity=0.030 Sum_probs=68.1
Q ss_pred CceEEEEcCCCcE-EEEeCCCCeEEEEeCC--CCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEE
Q 013321 22 EPFSVAVSPSGEL-LVLDSENSNIYKISTS--LSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 97 (445)
Q Consensus 22 ~P~gIAVdpdG~L-YVaDs~n~rI~kid~d--g~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 97 (445)
...+++++++|.. +++-..++.|..++.. .. ..+..+.+.. .-..+.+|+++++|. |+++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~--------------~~~~v~~~~~sp~~~~l~~~ 167 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK--NVLKLRKRFC--------------FSKRPNAISIAEDDTTVIIA 167 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS--SCEEEEEEEE--------------CSSCEEEEEECTTSSEEEEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC--ceeeeeeccc--------------CCCCceEEEEcCCCCEEEEE
Confidence 4689999999986 4777677888888765 21 1222222110 012467999999998 5555
Q ss_pred eCCCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCC---CeEEEEECCCCeEEEEECCCCce
Q 013321 98 DTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS---CSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 98 D~~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~d---G~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
+. .+.|+.++......... ... ..........++.+ .++ +.++++-...+.|+.+++....+
T Consensus 168 ~~-~g~v~~~~~~~~~~~~~--------~~~--~~~~h~~~v~~~~~-sp~~~~~~~l~s~~~d~~i~vwd~~~~~~ 232 (450)
T 2vdu_B 168 DK-FGDVYSIDINSIPEEKF--------TQE--PILGHVSMLTDVHL-IKDSDGHQFIITSDRDEHIKISHYPQCFI 232 (450)
T ss_dssp ET-TSEEEEEETTSCCCSSC--------CCC--CSEECSSCEEEEEE-EECTTSCEEEEEEETTSCEEEEEESCTTC
T ss_pred eC-CCcEEEEecCCcccccc--------cce--eeecccCceEEEEE-cCCCCCCcEEEEEcCCCcEEEEECCCCce
Confidence 54 67788887432110000 000 00001123345543 455 65666555677888888765443
No 215
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=81.96 E-value=13 Score=35.00 Aligned_cols=114 Identities=9% Similarity=-0.023 Sum_probs=63.2
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCC-CCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSP-YSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~-~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
...+|+++++|+++++-..++.|..++..... ......+.+. -.....|++.++|.++++=..
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~ 120 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL----------------NRAATFVRWSPNEDKFAVGSG 120 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCC----------------SSCEEEEECCTTSSCCEEEES
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc----------------CCceEEEEECCCCCEEEEEec
Confidence 45789999988877777777888888765311 0001111110 113458888888885555445
Q ss_pred CCEEEEEcCCC------cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 101 NMAIRKISDTG------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 101 N~rIrkfd~dG------v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
++.|+.+|.+. ...+.+. .-....++. ..+++.++++-...+.|+.+++..
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~----------------h~~~v~~~~-~~~~~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 121 ARVISVCYFEQENDWWVSKHLKRP----------------LRSTILSLD-WHPNNVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp SSCEEECCC-----CCCCEEECSS----------------CCSCEEEEE-ECTTSSEEEEEESSSCEEEEEECC
T ss_pred CCeEEEEEECCcccceeeeEeecc----------------cCCCeEEEE-EcCCCCEEEEEeCCCEEEEEEEEe
Confidence 67788887443 1222110 011234444 466777777766678888888753
No 216
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=81.74 E-value=29 Score=31.07 Aligned_cols=109 Identities=14% Similarity=0.074 Sum_probs=62.4
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
....+++.++|. +++-..++.|..++... ++........ -.....|++.++|.|+.+. .+
T Consensus 186 ~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~---~~~~~~~~~~---------------~~~i~~~~~~~~~~l~~~~-~d 245 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISCSNDGLIKLVDMHT---GDVLRTYEGH---------------ESFVYCIKLLPNGDIVSCG-ED 245 (313)
T ss_dssp CEEEEEEEETTE-EEEEETTSEEEEEETTT---CCEEEEEECC---------------SSCEEEEEECTTSCEEEEE-TT
T ss_pred cEEEEEEcCCCe-EEEccCCCeEEEEECCc---hhhhhhhhcC---------------CceEEEEEEecCCCEEEEe-cC
Confidence 456778877777 44555667788777652 2322221110 1234689999988766665 46
Q ss_pred CEEEEEcC-CC--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 102 MAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 102 ~rIrkfd~-dG--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
+.|+.+|. ++ +.++.... ....++. ..+++.++++ ...+.|+.+++...
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~-----------------~~i~~~~-~~~~~~~~~~-~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPA-----------------ISIWSVD-CMSNGDIIVG-SSDNLVRIFSQEKS 297 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSS-----------------SCEEEEE-ECTTSCEEEE-ETTSCEEEEESCGG
T ss_pred CEEEEEECCCCceeEEEeccC-----------------ceEEEEE-EccCCCEEEE-eCCCcEEEEeCCCC
Confidence 88999984 34 22322110 0123443 4667775554 44678888887654
No 217
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=81.30 E-value=52 Score=33.78 Aligned_cols=73 Identities=11% Similarity=0.213 Sum_probs=43.4
Q ss_pred ceEEEEcCCCc-EEEEeCC-------CCeEEEEeCCC-CCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC
Q 013321 23 PFSVAVSPSGE-LLVLDSE-------NSNIYKISTSL-SPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 93 (445)
Q Consensus 23 P~gIAVdpdG~-LYVaDs~-------n~rI~kid~dg-~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~ 93 (445)
..+++++|||. |+++... ...|+.++.++ ...+....+.... -.....+++.+||.
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~---------------~~~~~~~~~spdg~ 254 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP---------------EEAIAQAEWAPDGS 254 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET---------------TBCEEEEEECTTSC
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC---------------CceEcceEECCCCe
Confidence 45678999997 4444322 25788888762 1001344443221 11355788999998
Q ss_pred EEEEeCCCC--EEEEEcCC
Q 013321 94 IYIADTMNM--AIRKISDT 110 (445)
Q Consensus 94 LYVAD~~N~--rIrkfd~d 110 (445)
||++-..++ +|.++|.+
T Consensus 255 l~~~~~~~~~~~l~~~~~~ 273 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPA 273 (662)
T ss_dssp EEEEECTTSSCEEEEECTT
T ss_pred EEEEECCCCCeEEEEEECC
Confidence 766544444 89999863
No 218
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=81.22 E-value=14 Score=34.67 Aligned_cols=132 Identities=12% Similarity=-0.020 Sum_probs=64.3
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC-CccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPY-SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~-G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....++++++|.++++-..++.|..++...... .....+.+. .-.....|++.++|.++++=..
T Consensus 102 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---------------h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 102 AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP---------------LRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS---------------CCSCEEEEEECTTSSEEEEEES
T ss_pred ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc---------------cCCCeEEEEEcCCCCEEEEEeC
Confidence 356777777777666655666777766542110 001222110 0123468999999987766556
Q ss_pred CCEEEEEcCCC--cEE-EecCcccCC--CCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 101 NMAIRKISDTG--VTT-IAGGKWSRG--VGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 101 N~rIrkfd~dG--v~t-iaGg~~G~g--~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
.+.|+.+|... +.. ......+.. .+.. ......-....++. ..+++.++++-..++.|+.+++....+
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~-~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTV--CAEYPSGGWVHAVG-FSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEE--EECCCCSSSEEEEE-ECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhh--hhcccCCceEEEEE-ECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 67788887421 000 000000000 0000 00000111234444 577777777666778888888776544
No 219
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=80.70 E-value=24 Score=33.71 Aligned_cols=113 Identities=12% Similarity=0.074 Sum_probs=61.7
Q ss_pred CceEEEEcCC-CcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEe
Q 013321 22 EPFSVAVSPS-GELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIAD 98 (445)
Q Consensus 22 ~P~gIAVdpd-G~LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD 98 (445)
.+..|++.|+ +.++++-..++.|..++... ++. ..+.+. -..-..|++.++|. ++++=
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~---~~~~~~~~~~----------------~~~v~~l~~sp~~~~~lasg 288 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKN---PDSAQTSAVH----------------SQNITGLAYSYHSSPFLASI 288 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSC---GGGCEEECCC----------------SSCEEEEEECSSSSCCEEEE
T ss_pred cccchhhhhcccceEEEeecccceeEEECCC---CcEeEEEecc----------------ceeEEEEEEcCCCCCEEEEE
Confidence 4677888885 45777666777888887652 222 222211 11235788888764 44433
Q ss_pred CCCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 99 TMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 99 ~~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
...+.|+.+|...-..+... +.. ..-.+|++.+.++.++++-...+.|+..++..
T Consensus 289 s~D~~i~iwd~~~~~~~~~~------~H~---------~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 289 SEDCTVAVLDADFSEVFRDL------SHR---------DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp ETTSCEEEECTTSCEEEEEC------CCS---------SCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred eCCCEEEEEECCCCcEeEEC------CCC---------CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 34567888885542221110 000 11234544334677776666677787777644
No 220
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=80.44 E-value=59 Score=33.90 Aligned_cols=118 Identities=15% Similarity=0.078 Sum_probs=64.5
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCC--CEEEEeCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG--NIYIADTM 100 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG--~LYVAD~~ 100 (445)
-.+|+++++|.++++-+.++.|..++..+ .....+.... .++ -..-.++++.+++ .++++=..
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~---~~~~~~~~~~---~~h---------~~~v~~~~~~~~~~~~~l~s~s~ 539 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLG---ECKYTISEGG---EGH---------RDWVSCVRFSPNTLQPTIVSASW 539 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTS---CEEEEECSST---TSC---------SSCEEEEEECSCSSSCEEEEEET
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCC---CcceeeccCC---CCC---------CCcEEEEEEeCCCCcceEEEEeC
Confidence 45677777777666666666777766542 1111111110 111 1123577888776 35555555
Q ss_pred CCEEEEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee
Q 013321 101 NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 173 (445)
Q Consensus 101 N~rIrkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~~~ 173 (445)
.+.|+.+|... +.++.+.. ..-.++ ...+++.++++-...+.|+.+++....+..
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h~-----------------~~v~~v-~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGHT-----------------GYVSTV-AVSPDGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCCS-----------------SCEEEE-EECTTSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcEEEEEcCCC-----------------CCEEEE-EEeCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 67788888543 22221110 112334 356777777777777888888876655443
No 221
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=80.12 E-value=43 Score=32.04 Aligned_cols=73 Identities=21% Similarity=0.266 Sum_probs=43.4
Q ss_pred CceEEEEcCCC-cEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEeC
Q 013321 22 EPFSVAVSPSG-ELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADT 99 (445)
Q Consensus 22 ~P~gIAVdpdG-~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD~ 99 (445)
....+++.+++ .++++-..++.|+.++... ++........ ..-.....+++.+ ++.++++=.
T Consensus 171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~-------------~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 171 QVTCVAASPHKDSVFLSCSEDNRILLWDTRC---PKPASQIGCS-------------APGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTS---SSCEEECC-----------------CCCEEEEEECSSCTTEEEEEE
T ss_pred ceEEEEecCCCCCceeeeccccccccccccc---cceeeeeecc-------------eeeccceeeeecCCCCcceEEec
Confidence 34677777765 4777766677777777652 2322221110 0112356788887 456777656
Q ss_pred CCCEEEEEcCC
Q 013321 100 MNMAIRKISDT 110 (445)
Q Consensus 100 ~N~rIrkfd~d 110 (445)
.++.|+.+|..
T Consensus 235 ~dg~v~~wd~~ 245 (344)
T 4gqb_B 235 ENGTVSLVDTK 245 (344)
T ss_dssp TTSEEEEEESC
T ss_pred cCCcEEEEECC
Confidence 67889999853
No 222
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=80.10 E-value=80 Score=35.20 Aligned_cols=69 Identities=13% Similarity=0.126 Sum_probs=48.5
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
....++++++|.++++-..++.|..++... +........ + -....+|++.++|..+++-...
T Consensus 842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~---~~~~~~~~~------h---------~~~v~~v~~spdg~~l~s~s~d 903 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALSQYCVELWNIDS---RLKVADCRG------H---------LSWVHGVMFSPDGSSFLTASDD 903 (1249)
T ss_dssp CCCEEEECSSTTEEEEECSSSCEEEEETTT---TEEEEEECC------C---------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEEcCC---CceeeecCC------C---------ccceEEEEECCCCCEEEEEeCC
Confidence 467899999999888888888999998763 222222111 1 2245689999999877766667
Q ss_pred CEEEEEc
Q 013321 102 MAIRKIS 108 (445)
Q Consensus 102 ~rIrkfd 108 (445)
+.|+.++
T Consensus 904 g~v~vw~ 910 (1249)
T 3sfz_A 904 QTIRVWE 910 (1249)
T ss_dssp SCEEEEE
T ss_pred CeEEEEE
Confidence 7788776
No 223
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=79.98 E-value=16 Score=33.68 Aligned_cols=71 Identities=10% Similarity=0.013 Sum_probs=42.2
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccCCCcceEEEcCC--CCEEEEe
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR--GNIYIAD 98 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d--G~LYVAD 98 (445)
.-..|+++++|.++++-..++.|..++..... +... .+.+. -..-..|++.++ +.++++=
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~h----------------~~~v~~~~~~~~~~~~~l~s~ 75 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-HKLIDTLTGH----------------EGPVWRVDWAHPKFGTILASC 75 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTE-EEEEEEECCC----------------SSCEEEEEECCGGGCSEEEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-ceeeeEecCC----------------CCcEEEEEeCCCCCCCEEEEe
Confidence 46789999999988887778888888764211 1111 11111 012346777654 6655544
Q ss_pred CCCCEEEEEcC
Q 013321 99 TMNMAIRKISD 109 (445)
Q Consensus 99 ~~N~rIrkfd~ 109 (445)
..++.|+.+|.
T Consensus 76 ~~dg~v~iwd~ 86 (379)
T 3jrp_A 76 SYDGKVLIWKE 86 (379)
T ss_dssp ETTSCEEEEEE
T ss_pred ccCCEEEEEEc
Confidence 44566777763
No 224
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=79.97 E-value=37 Score=31.27 Aligned_cols=75 Identities=11% Similarity=-0.061 Sum_probs=45.8
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
.....++++++|.++++-..++.|..++.+...........-. + .-.....|++.++|.++++-..
T Consensus 97 ~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~-----~---------~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 97 RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK-----P---------IRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT-----T---------CCSCEEEEEECTTSSEEEEEET
T ss_pred CceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec-----c---------cCCCeeEEEEcCCCCEEEEEcC
Confidence 3567888888888777766677777766542110000111100 0 1124568999999987776666
Q ss_pred CCEEEEEcC
Q 013321 101 NMAIRKISD 109 (445)
Q Consensus 101 N~rIrkfd~ 109 (445)
++.|+.+|.
T Consensus 163 dg~i~~~d~ 171 (372)
T 1k8k_C 163 DFKCRIFSA 171 (372)
T ss_dssp TSCEEEEEC
T ss_pred CCCEEEEEc
Confidence 788888883
No 225
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=79.80 E-value=35 Score=30.94 Aligned_cols=75 Identities=15% Similarity=0.242 Sum_probs=48.3
Q ss_pred CceEEEEcCC-CcEEEEeCCCCeEEEEeCCCCC--CCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEe
Q 013321 22 EPFSVAVSPS-GELLVLDSENSNIYKISTSLSP--YSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIAD 98 (445)
Q Consensus 22 ~P~gIAVdpd-G~LYVaDs~n~rI~kid~dg~~--~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD 98 (445)
.-.+|+++|+ ++++++-+..+.|+.++..... .+...... .|+ -.....+++.++|.++++=
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l------~~h---------~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRAL------RGH---------SHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEE------CCC---------SSCEEEEEECTTSSEEEEE
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEE------eCC---------CCCEEEEEECCCCCEEEEE
Confidence 4679999996 6888888888888888754211 01111110 111 1234689999999977766
Q ss_pred CCCCEEEEEcCCC
Q 013321 99 TMNMAIRKISDTG 111 (445)
Q Consensus 99 ~~N~rIrkfd~dG 111 (445)
...+.|+..+...
T Consensus 105 ~~d~~i~~~~~~~ 117 (340)
T 4aow_A 105 SWDGTLRLWDLTT 117 (340)
T ss_dssp ETTSEEEEEETTT
T ss_pred cccccceEEeecc
Confidence 6678888888654
No 226
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=79.60 E-value=49 Score=32.42 Aligned_cols=71 Identities=20% Similarity=0.168 Sum_probs=45.3
Q ss_pred CceEEEEcCCCcE-EEEeCC--CCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEE
Q 013321 22 EPFSVAVSPSGEL-LVLDSE--NSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA 97 (445)
Q Consensus 22 ~P~gIAVdpdG~L-YVaDs~--n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA 97 (445)
...+++++|+|.. +++... +..|+.++..+ |+...+.+.. .....+++.++|. |+++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t---g~~~~l~~~~----------------~~~~~~~~spdg~~la~~ 240 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN---GAVRQVASFP----------------RHNGAPAFSPDGSKLAFA 240 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCEEEEECCS----------------SCEEEEEECTTSSEEEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCC---CcEEEeecCC----------------CcccCEEEcCCCCEEEEE
Confidence 4678999999973 333322 35899998863 4555444321 1345889999998 5544
Q ss_pred eC--CCCEEEEEcCCC
Q 013321 98 DT--MNMAIRKISDTG 111 (445)
Q Consensus 98 D~--~N~rIrkfd~dG 111 (445)
-. ++..|+.+|..+
T Consensus 241 ~~~~g~~~i~~~d~~~ 256 (415)
T 2hqs_A 241 LSKTGSLNLYVMDLAS 256 (415)
T ss_dssp ECTTSSCEEEEEETTT
T ss_pred EecCCCceEEEEECCC
Confidence 33 256799998543
No 227
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=79.12 E-value=50 Score=34.22 Aligned_cols=65 Identities=8% Similarity=0.127 Sum_probs=40.7
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~ 100 (445)
.+..++++||+.|.++. ++.|+.++..+ ++...+.... .....+++.++|. |+++ .
T Consensus 83 ~v~~~~~spd~~~~~~~--~~~i~~~d~~~---~~~~~l~~~~----------------~~~~~~~~SpdG~~la~~--~ 139 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFT--QGGLVGFDMLA---RKVTYLFDTN----------------EETASLDFSPVGDRVAYV--R 139 (706)
T ss_dssp CCEEEEETTTTEEEEEE--TTEEEEEETTT---TEEEEEECCT----------------TCCTTCEECTTSSEEEEE--E
T ss_pred CceeEEECCCCeEEEEE--CCEEEEEECCC---CceEEccCCc----------------ccccCCcCCCCCCEEEEE--E
Confidence 57899999996666653 48999998863 4444443321 0234567788886 3333 2
Q ss_pred CCEEEEEcC
Q 013321 101 NMAIRKISD 109 (445)
Q Consensus 101 N~rIrkfd~ 109 (445)
++.|+.++.
T Consensus 140 ~~~i~v~~~ 148 (706)
T 2z3z_A 140 NHNLYIARG 148 (706)
T ss_dssp TTEEEEEEC
T ss_pred CCeEEEEec
Confidence 456777764
No 228
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=78.67 E-value=47 Score=34.26 Aligned_cols=123 Identities=12% Similarity=0.090 Sum_probs=71.3
Q ss_pred CceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....+++.|++. ++++-+.++.|..++... ++...... ++ -..-..|++.++|.++++=..
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~---~~~~~~l~------~H---------~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPP---FKFKSTFG------EH---------TKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTT---BEEEEEEC------CC---------SSCEEEEEECTTSSEEEEEET
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCC---CeEeeeec------cc---------cCceEEEEECCCCCEEEEEEC
Confidence 457888988875 577777778888887542 23222211 11 113468999999998887777
Q ss_pred CCEEEEEcC-CCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 101 NMAIRKISD-TGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 101 N~rIrkfd~-dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
.+.|+..|. +|......... . ......-....++. ..++|.++++-...+.|+..++....+
T Consensus 211 D~~i~lwd~~~g~~~~~~~~~-----~---~~~~~h~~~V~~v~-~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 211 DGTIVLYNGVDGTKTGVFEDD-----S---LKNVAHSGSVFGLT-WSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp TSCEEEEETTTCCEEEECBCT-----T---SSSCSSSSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCcEEEEECCCCcEeeeeccc-----c---ccccccCCCEEEEE-ECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 788999984 44222111000 0 00000111234444 466777777766777888888765443
No 229
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=78.66 E-value=63 Score=33.15 Aligned_cols=79 Identities=13% Similarity=0.177 Sum_probs=46.6
Q ss_pred CceEEEEcCCCcEEEEeCCCC--eEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCC-CcceEEEcCCCCEEEEe
Q 013321 22 EPFSVAVSPSGELLVLDSENS--NIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMN-HPKGLAVDDRGNIYIAD 98 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~--rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln-~P~GIavD~dG~LYVAD 98 (445)
....++++|||.||++...++ +|++++..+ ++...+....... + ..... ....+++.++|.|+++-
T Consensus 243 ~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~---~~~~~l~~~~~~~-~-------~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 243 AIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT---GAATQLCRREEEF-A-------GPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp CEEEEEECTTSCEEEEECTTSSCEEEEECTTT---CCEEESSCCSSBS-S-------CCCCSTTCCSEEECTTSCEEEEE
T ss_pred eEcceEECCCCeEEEEECCCCCeEEEEEECCC---Cceeecccccccc-c-------CccccccCceEeEeCCCEEEEEE
Confidence 567899999999877765555 899998753 4444433221000 0 00010 12468888888866543
Q ss_pred C-CCCEEEEEcCCC
Q 013321 99 T-MNMAIRKISDTG 111 (445)
Q Consensus 99 ~-~N~rIrkfd~dG 111 (445)
. +..+|.++|.++
T Consensus 312 ~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 312 GKGAAVLGILDPES 325 (662)
T ss_dssp BSSSCEEEEEETTT
T ss_pred EcCccEEEEEECCC
Confidence 3 556788888654
No 230
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=78.62 E-value=33 Score=29.97 Aligned_cols=29 Identities=7% Similarity=-0.035 Sum_probs=17.8
Q ss_pred cceEEEcCCCC-EEEEeCCCC--EEEEEcCCC
Q 013321 83 PKGLAVDDRGN-IYIADTMNM--AIRKISDTG 111 (445)
Q Consensus 83 P~GIavD~dG~-LYVAD~~N~--rIrkfd~dG 111 (445)
...+++.++|. |+++...+. +|..++..+
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~ 162 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS 162 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTEEEEEEEETTT
T ss_pred ccceEECCCCCEEEEEECCCCceEEEEEECCC
Confidence 45788999998 554443344 566665543
No 231
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=78.52 E-value=44 Score=33.29 Aligned_cols=74 Identities=14% Similarity=-0.003 Sum_probs=49.4
Q ss_pred CceEEEEcCC-CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPS-GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpd-G~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....++++++ |+++++-..++.|..++... ++........ ..++ -....+|++. +|.++++=..
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~~--~~~~---------~~~v~~~~~~-~~~~l~~~~~ 272 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKS---GEFLKYIEDD--QEPV---------QGGIFALSWL-DSQKFATVGA 272 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTT---CCEEEECCBT--TBCC---------CSCEEEEEES-SSSEEEEEET
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCC---CCEeEEeccc--cccc---------CCceEEEEEc-CCCEEEEEcC
Confidence 4678999998 99888877788999998752 3433332100 0000 1134588898 8887776666
Q ss_pred CCEEEEEcCC
Q 013321 101 NMAIRKISDT 110 (445)
Q Consensus 101 N~rIrkfd~d 110 (445)
++.|+.+|..
T Consensus 273 d~~i~~wd~~ 282 (615)
T 1pgu_A 273 DATIRVWDVT 282 (615)
T ss_dssp TSEEEEEETT
T ss_pred CCcEEEEECC
Confidence 7889999954
No 232
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=78.12 E-value=41 Score=31.31 Aligned_cols=85 Identities=6% Similarity=0.050 Sum_probs=49.3
Q ss_pred CceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEeC
Q 013321 22 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADT 99 (445)
Q Consensus 22 ~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD~ 99 (445)
.-..|+++| +|+++++-..++.|..++......-........ ...+ .......-.....|++.+ ++.++++=.
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAV--CSIG---RDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEE--EEEC---TTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccc--cccc---ccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 467999999 999888888889999998764221111110000 0000 000000122346888888 666666555
Q ss_pred CCCEEEEEcCCC
Q 013321 100 MNMAIRKISDTG 111 (445)
Q Consensus 100 ~N~rIrkfd~dG 111 (445)
..+.|+.+|...
T Consensus 120 ~d~~i~iwd~~~ 131 (408)
T 4a11_B 120 FDKTLKVWDTNT 131 (408)
T ss_dssp TTSEEEEEETTT
T ss_pred CCCeEEEeeCCC
Confidence 678899888554
No 233
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=78.08 E-value=19 Score=37.68 Aligned_cols=69 Identities=10% Similarity=0.110 Sum_probs=41.2
Q ss_pred ceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeCC
Q 013321 23 PFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM 100 (445)
Q Consensus 23 P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~ 100 (445)
...++++|||. |+++.. +.|+.++.++.....+..+.+. -.....+++.+||. |+++.
T Consensus 111 v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~----------------~~~~~~~~~SPDG~~la~~~-- 170 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHG----------------EGFATDAKLSPKGGFVSFIR-- 170 (741)
T ss_dssp SCCCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCS----------------SSCEEEEEECTTSSEEEEEE--
T ss_pred cceeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccC----------------CcccccccCCCCCCEEEEEe--
Confidence 46889999998 444443 8899998774200022211111 12356888999998 44443
Q ss_pred CCEEEEEcCCC
Q 013321 101 NMAIRKISDTG 111 (445)
Q Consensus 101 N~rIrkfd~dG 111 (445)
++.|+.+|.++
T Consensus 171 ~~~i~~~d~~~ 181 (741)
T 2ecf_A 171 GRNLWVIDLAS 181 (741)
T ss_dssp TTEEEEEETTT
T ss_pred CCcEEEEecCC
Confidence 34788888654
No 234
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=77.28 E-value=43 Score=30.49 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=68.7
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCC-CCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEEEe
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSL-SPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIAD 98 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg-~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYVAD 98 (445)
..+.++++++++ |+++ ..++.|..++... .. ......... .-.....|++.+ +|.++++=
T Consensus 151 ~~v~~~~~~~~~-l~~~-~~d~~i~i~d~~~~~~-~~~~~~~~~---------------~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVG-MNNSQVQWFRLPLCED-DNGTIEESG---------------LKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp CCEEEEEECSSE-EEEE-ESTTEEEEEESSCCTT-CCCEEEECS---------------CSSCEEEEEECSGGGCEEEEE
T ss_pred CceEEEEecCCc-EEEE-eCCCeEEEEECCcccc-ccceeeecC---------------CCCceeEEEECCCCCCEEEEE
Confidence 457889998876 5444 4577888888763 11 111111111 011356899999 88877766
Q ss_pred CCCCEEEEEc--CC------C-cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 99 TMNMAIRKIS--DT------G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 99 ~~N~rIrkfd--~d------G-v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
..++.|+.++ .. . ..++.+.... . ..........++. ..+++.++++-..++.|+.+++...
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~i~~~~-~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN-----L---KDTNLAYPVNSIE-FSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCC-----T---TCCSSCCCEEEEE-ECTTTCCEEEEETTSCEEEEETTTT
T ss_pred ecCCcEEEEEEcCCCcccccccceeeeccccc-----c---cccccceeEEEEE-EcCCCCEEEEecCCceEEEEcCccH
Confidence 6678888754 33 1 3333221100 0 0001111233443 4667766666666788888887754
Q ss_pred ce
Q 013321 170 DC 171 (445)
Q Consensus 170 ~~ 171 (445)
.+
T Consensus 284 ~~ 285 (342)
T 1yfq_A 284 KK 285 (342)
T ss_dssp EE
T ss_pred hH
Confidence 43
No 235
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=75.93 E-value=52 Score=30.76 Aligned_cols=70 Identities=11% Similarity=0.060 Sum_probs=47.7
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc-EEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP-KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v-~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
-..|+++++|.++++-..++.|..++... ++. ..+.+. -..-..|++.++|.++++=...
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~---~~~~~~~~~h----------------~~~v~~v~~sp~~~~l~s~~~d 139 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRT---GTTYKRFVGH----------------QSEVYSVAFSPDNRQILSAGAE 139 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTS---SCEEEEEECC----------------CSCEEEEEECSSTTEEEEEETT
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCC---CcEEEEEcCC----------------CCcEEEEEECCCCCEEEEEcCC
Confidence 46789999999888888888999998763 332 222221 1123578899988866655556
Q ss_pred CEEEEEcCCC
Q 013321 102 MAIRKISDTG 111 (445)
Q Consensus 102 ~rIrkfd~dG 111 (445)
+.|+.+|..+
T Consensus 140 ~~i~~wd~~~ 149 (343)
T 2xzm_R 140 REIKLWNILG 149 (343)
T ss_dssp SCEEEEESSS
T ss_pred CEEEEEeccC
Confidence 7788887554
No 236
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=75.48 E-value=58 Score=31.08 Aligned_cols=122 Identities=10% Similarity=0.076 Sum_probs=75.5
Q ss_pred CceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....+++.+ +++++++-..++.|..++..... ..+..+.|. -..-..|++.++|.++++=..
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~ 269 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDTTVRLWDLRITS-RAVRTYHGH----------------EGDINSVKFFPDGQRFGTGSD 269 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-CCCEEECCC----------------SSCCCEEEECTTSSEEEEECS
T ss_pred CeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-cceEEECCc----------------CCCeEEEEEecCCCeEEEEcC
Confidence 356777876 78888888888888888864210 112222221 112458999999998888778
Q ss_pred CCEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 013321 101 NMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 171 (445)
Q Consensus 101 N~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~~ 171 (445)
.+.|+.+|.. | +.++..... . ..........++ ..++|.++++-..++.|+.++.....+
T Consensus 270 D~~i~lwd~~~~~~~~~~~~~~~-----~-----~~~~~~~v~~~~-~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 270 DGTCRLFDMRTGHQLQVYNREPD-----R-----NDNELPIVTSVA-FSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp SSCEEEEETTTTEEEEEECCCCS-----S-----SCCSSCSCSEEE-ECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred CCeEEEEECCCCcEEEEeccccc-----c-----cccccCceEEEE-ECCCCCEEEEEECCCCEEEEECCCCce
Confidence 8889999954 4 222211110 0 011112234554 577888888888888899888765443
No 237
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=75.30 E-value=24 Score=32.30 Aligned_cols=76 Identities=12% Similarity=0.068 Sum_probs=51.5
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
....+|++++ +++++++-..++.|..++... ++........ .+ .-....+|+++++|.++++=.
T Consensus 116 ~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~---~~---------~~~~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 116 NAINELKFHPRDPNLLLSVSKDHALRLWNIQT---DTLVAIFGGV---EG---------HRDEVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTT---TEEEEEECST---TS---------CSSCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEEeec---CeEEEEeccc---cc---------ccCceeEEEECCCCCEEEEec
Confidence 3467899998 888888877788899998762 3333333210 01 112456899999998776666
Q ss_pred CCCEEEEEcCCC
Q 013321 100 MNMAIRKISDTG 111 (445)
Q Consensus 100 ~N~rIrkfd~dG 111 (445)
.++.|+.+|...
T Consensus 181 ~dg~i~i~d~~~ 192 (366)
T 3k26_A 181 MDHSLKLWRINS 192 (366)
T ss_dssp TTSCEEEEESCS
T ss_pred CCCCEEEEECCC
Confidence 678899998553
No 238
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=74.36 E-value=65 Score=31.13 Aligned_cols=67 Identities=18% Similarity=0.214 Sum_probs=43.4
Q ss_pred EEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCCEEEE
Q 013321 27 AVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRK 106 (445)
Q Consensus 27 AVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~rIrk 106 (445)
+++++|+++++-..++.|..++... ++....... + -.....++++++|..+++=...+.|+.
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~---~~~~~~~~~------~---------~~~v~~~~~~~~~~~l~sg~~dg~i~v 336 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQ---MKCLYILSG------H---------TDRIYSTIYDHERKRCISASMDTTIRI 336 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTT---TEEEEEECC------C---------SSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCC---CcEEEEecC------C---------CCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 4455677777777788888888752 332222111 1 123458999999987777667788999
Q ss_pred EcC-CC
Q 013321 107 ISD-TG 111 (445)
Q Consensus 107 fd~-dG 111 (445)
+|. +|
T Consensus 337 wd~~~~ 342 (464)
T 3v7d_B 337 WDLENG 342 (464)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 995 44
No 239
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=73.95 E-value=9.4 Score=39.79 Aligned_cols=75 Identities=1% Similarity=-0.118 Sum_probs=46.3
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 99 (445)
..+..++++|||.++++ ..++.|+.++..+ |+...+....... -.....+++.+||. |.++..
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~---g~~~~~~~~~~~~------------~~~v~~~~~SpDg~~l~~~~~ 80 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVET---NTSTVLIEGKKIE------------SLRAIRYEISPDREYALFSYN 80 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGG---CCCEEEECTTTTT------------TTTCSEEEECTTSSEEEEEES
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCC---CcEEEEecccccc------------ccccceEEECCCCCEEEEEec
Confidence 35788999999996555 4567888888764 4444444321000 01357899999998 444321
Q ss_pred -C-------CCEEEEEcCCC
Q 013321 100 -M-------NMAIRKISDTG 111 (445)
Q Consensus 100 -~-------N~rIrkfd~dG 111 (445)
. ...|..+|.++
T Consensus 81 ~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 81 VEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp CCCCSSSCCCSEEEEEESSS
T ss_pred CccceeecceeeEEEEECCC
Confidence 1 25677887543
No 240
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=73.05 E-value=56 Score=30.48 Aligned_cols=73 Identities=19% Similarity=0.109 Sum_probs=46.5
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCC-CCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLS-PYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~-~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
.-.+|+++|+|+++++-..++.|..++.... ...+...... ++ -..-..|++.++|.++++=..
T Consensus 109 ~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~------~h---------~~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ------EH---------SQDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC------CC---------SSCEEEEEECSSSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec------cC---------CCceEEEEECCCCCEEEEEcC
Confidence 3568899999988888878888888886311 1111111111 11 113458899999987777666
Q ss_pred CCEEEEEcC
Q 013321 101 NMAIRKISD 109 (445)
Q Consensus 101 N~rIrkfd~ 109 (445)
.+.|+..+.
T Consensus 174 D~~i~iW~~ 182 (330)
T 2hes_X 174 DDTVRIWKD 182 (330)
T ss_dssp TSCEEEEEE
T ss_pred CCeEEEEEC
Confidence 777887763
No 241
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=72.86 E-value=36 Score=31.03 Aligned_cols=109 Identities=12% Similarity=0.036 Sum_probs=62.5
Q ss_pred EcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC---CCCEEEEeCCCCEE
Q 013321 28 VSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD---RGNIYIADTMNMAI 104 (445)
Q Consensus 28 VdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~---dG~LYVAD~~N~rI 104 (445)
++++|.++++-..++.|..++... ++.....+. -.....|++++ ++.++++=..++.|
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRN---MALRWETNI----------------KNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTT---TEEEEEEEC----------------SSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred cCCCCCEEEEEccCCeEEEEECcc---CceeeecCC----------------CCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 567888888888888999998763 333222211 11346889998 78866665667889
Q ss_pred EEEcCCC---cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCe-EEEEECCCCeEEEEECCC
Q 013321 105 RKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 105 rkfd~dG---v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~-LyVaD~gn~rIr~i~l~~ 168 (445)
+.+|... +..+..... ...-....++. ..+++. ++++-...+.|+.+++..
T Consensus 237 ~i~d~~~~~~~~~~~~~~~------------~~~~~~v~~~~-~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSE------------KAHKSTVWQVR-HLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEEETTTEEEEEEE------------ECCSSCEEEEE-EETTEEEEEEEEETTSEEEEEEEEC
T ss_pred EEEeCcCCCcccceeeecc------------CCCcCCEEEEE-ECCCCCcEEEEEeCCCcEEEeecCC
Confidence 8888432 111110000 00011223444 355665 666666677887777654
No 242
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=72.25 E-value=70 Score=30.59 Aligned_cols=66 Identities=18% Similarity=0.177 Sum_probs=44.2
Q ss_pred EcCCCcEEEEeCCCCeEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCCEEEE
Q 013321 28 VSPSGELLVLDSENSNIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRK 106 (445)
Q Consensus 28 VdpdG~LYVaDs~n~rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~rIrk 106 (445)
..+++.++++-..++.|..++... ++.. .+.+.. .-.....|+++++|.++++=..++.|+.
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~--------------h~~~v~~~~~s~~~~~l~s~~~dg~i~i 240 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRT---LERLQIIENSP--------------RHGAVSSICIDEECCVLILGTTRGIIDI 240 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTT---CCEEEEEECCG--------------GGCCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCC---CeeeEEEccCC--------------CCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 446788888888889999998763 3332 222210 0124568999999987776666788998
Q ss_pred EcCC
Q 013321 107 ISDT 110 (445)
Q Consensus 107 fd~d 110 (445)
+|..
T Consensus 241 wd~~ 244 (437)
T 3gre_A 241 WDIR 244 (437)
T ss_dssp EETT
T ss_pred EEcC
Confidence 8854
No 243
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=72.13 E-value=55 Score=30.52 Aligned_cols=73 Identities=22% Similarity=0.146 Sum_probs=45.3
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCC----CCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEE
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSP----YSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 97 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~----~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVA 97 (445)
.-..|+++|+|.++++-..++.|..++..... ........ .|+ -..-.+|++.++|.++++
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~------~~h---------~~~V~~v~~sp~g~~las 124 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAII------EGH---------ENEVKGVAWSNDGYYLAT 124 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEE------C-------------CEEEEEECTTSCEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEE------cCC---------CCcEEEEEECCCCCEEEE
Confidence 35789999999988888888888888764210 01111111 111 112358999999987776
Q ss_pred eCCCCEEEEEcC
Q 013321 98 DTMNMAIRKISD 109 (445)
Q Consensus 98 D~~N~rIrkfd~ 109 (445)
=...+.|+..|.
T Consensus 125 ~s~D~~v~iwd~ 136 (330)
T 2hes_X 125 CSRDKSVWIWET 136 (330)
T ss_dssp EETTSCEEEEEC
T ss_pred EeCCCEEEEEec
Confidence 556777888875
No 244
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=71.62 E-value=30 Score=31.63 Aligned_cols=65 Identities=9% Similarity=-0.020 Sum_probs=35.0
Q ss_pred EcCCCCEEEEeCCCCEEEEEcCCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECC---CCeEEEEECCCCeEEEE
Q 013321 88 VDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS---SCSLLVIDRGNQAIREI 164 (445)
Q Consensus 88 vD~dG~LYVAD~~N~rIrkfd~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~---dG~LyVaD~gn~rIr~i 164 (445)
+.++|.++++-..++.|+.+|......+.... . -.....+. ..+ ++.++++-..++.|+.+
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------~---------~~~v~~~~-~~~~~~~~~~l~~~~~dg~i~i~ 239 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWETN------I---------KNGVCSLE-FDRKDISMNKLVATSLEGKFHVF 239 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEEEE------C---------SSCEEEEE-ESCSSSSCCEEEEEESTTEEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeeecC------C---------CCceEEEE-cCCCCCCCCEEEEECCCCeEEEE
Confidence 56788877766667889999865422111000 0 01123333 344 55555555666777777
Q ss_pred ECCC
Q 013321 165 QLHD 168 (445)
Q Consensus 165 ~l~~ 168 (445)
++..
T Consensus 240 d~~~ 243 (357)
T 3i2n_A 240 DMRT 243 (357)
T ss_dssp EEEE
T ss_pred eCcC
Confidence 7543
No 245
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=71.35 E-value=70 Score=30.24 Aligned_cols=113 Identities=10% Similarity=0.065 Sum_probs=66.9
Q ss_pred ceEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 23 PFSVAVSP--SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 23 P~gIAVdp--dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
...+++.+ +|+++++-..++.|..++... ++....... + -..-.+|++.++|.++++=..
T Consensus 199 v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~---~~~~~~~~~------h---------~~~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRS---GQCVQAFET------H---------ESDVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp EEEEEECCCSSCCEEEEEETTSCEEEEETTT---CCEEEEECC------C---------SSCEEEEEECTTSSEEEEEET
T ss_pred eEEEEEEeCCCCCEEEEEeCCCeEEEEECCC---CcEEEEecC------C---------CCCeEEEEEeCCCCEEEEEeC
Confidence 45666665 467777777778888888652 332222111 0 113458999999997777666
Q ss_pred CCEEEEEcCCCc---EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 013321 101 NMAIRKISDTGV---TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 169 (445)
Q Consensus 101 N~rIrkfd~dGv---~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~ 169 (445)
.+.|+.+|.... .++.... .......+. ..++|.++++-...+.|+.+++...
T Consensus 261 D~~v~lwd~~~~~~~~~~~~~~---------------~~~~~~~~~-~s~~g~~l~~g~~d~~i~vwd~~~~ 316 (354)
T 2pbi_B 261 DATCRLYDLRADREVAIYSKES---------------IIFGASSVD-FSLSGRLLFAGYNDYTINVWDVLKG 316 (354)
T ss_dssp TSCEEEEETTTTEEEEEECCTT---------------CCSCEEEEE-ECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCeEEEEECCCCcEEEEEcCCC---------------cccceeEEE-EeCCCCEEEEEECCCcEEEEECCCC
Confidence 788999985432 2221100 011123343 4677777777777788888887543
No 246
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=71.26 E-value=67 Score=29.96 Aligned_cols=112 Identities=11% Similarity=0.056 Sum_probs=62.9
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCC---------
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG--------- 92 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG--------- 92 (445)
...+|+++|+|.++++-..++.|..++..+ ......... .++ -..-..+++.+++
T Consensus 120 ~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~----~~~~~~~~~---~~~---------~~~v~~~~~~~~~~~~~~~~~~ 183 (343)
T 2xzm_R 120 EVYSVAFSPDNRQILSAGAEREIKLWNILG----ECKFSSAEK---ENH---------SDWVSCVRYSPIMKSANKVQPF 183 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSCEEEEESSS----CEEEECCTT---TSC---------SSCEEEEEECCCCCSCSCCCSS
T ss_pred cEEEEEECCCCCEEEEEcCCCEEEEEeccC----Cceeeeecc---cCC---------CceeeeeeeccccccccccCCC
Confidence 457889999988877777788888888652 111111100 000 1112355555544
Q ss_pred -CEEEEeCCCCEEEEEcCCCc--EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC
Q 013321 93 -NIYIADTMNMAIRKISDTGV--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 93 -~LYVAD~~N~rIrkfd~dGv--~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~ 167 (445)
.++++=...+.|+.+|..+. .++.+.. ....++. ..++|.++++-...+.|+.+++.
T Consensus 184 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~-----------------~~v~~~~-~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 184 APYFASVGWDGRLKVWNTNFQIRYTFKAHE-----------------SNVNHLS-ISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CCEEEEEETTSEEEEEETTTEEEEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTCEEEEEESS
T ss_pred CCEEEEEcCCCEEEEEcCCCceeEEEcCcc-----------------ccceEEE-ECCCCCEEEEEcCCCeEEEEECC
Confidence 45555455677888885552 2221110 1123343 56777777777777888888863
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=71.07 E-value=53 Score=31.06 Aligned_cols=30 Identities=30% Similarity=0.438 Sum_probs=20.9
Q ss_pred cceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Q 013321 83 PKGLAVDDRGNIYIADTMNMAIRKISD-TGVTT 114 (445)
Q Consensus 83 P~GIavD~dG~LYVAD~~N~rIrkfd~-dGv~t 114 (445)
+.+++++ ++.||+++. ++.|..+|. +|...
T Consensus 270 ~~~~~~~-~~~l~~~~~-~g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 270 VNDFIVD-GNRIYLVDQ-NDRVMALTIDGGVTL 300 (376)
T ss_dssp EEEEEEE-TTEEEEEET-TCCEEEEETTTCCEE
T ss_pred CCCceEE-CCEEEEEcC-CCeEEEEECCCCcEE
Confidence 3456666 678999986 567999995 56433
No 248
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=70.71 E-value=17 Score=38.64 Aligned_cols=119 Identities=10% Similarity=0.054 Sum_probs=61.3
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCC-CcceEEEcCCCCE--EEEeC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMN-HPKGLAVDDRGNI--YIADT 99 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln-~P~GIavD~dG~L--YVAD~ 99 (445)
-..++..+||.+++++ ++.|+.++..+ |+...+....... .+. ...++++.+||.. +..+.
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~---~~~~~~~~~~~~~-----------~~~~~~~~~~~Spdg~~l~~~~~~ 82 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEY---GNSSVFLENSTFD-----------EFGHSINDYSISPDGQFILLEYNY 82 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTT---CCEEEEECTTTTT-----------TCCSCCCEEEECTTSSEEEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCC---CceEEEEechhhh-----------hhcccccceEECCCCCEEEEEECC
Confidence 4578999999888887 78999999874 4444433221100 011 1235788888872 22321
Q ss_pred C-------CCEEEEEcCCC-c-EEEecCcccCCCCCCCCCccCcccCCC--ceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 100 M-------NMAIRKISDTG-V-TTIAGGKWSRGVGHVDGPSEDAKFSND--FDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 100 ~-------N~rIrkfd~dG-v-~tiaGg~~G~g~G~~dgp~~~a~f~~P--~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
. +..|..+|..+ . ..+.... +......| +| .-|+++ .++.||+.|..++.+++++.++
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~~~~l~~~~---------~~~~~~~~-SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g 151 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQLITEERIP---------NNTQWVTW-SPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTG 151 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCSSCCC---------TTEEEEEE-CSSTTCEEEE-ETTEEEEESSTTSCCEECCSCC
T ss_pred eeeEEEccceEEEEEECCCCcEEEcccCC---------CcceeeEE-CCCCCEEEEE-ECCeEEEEECCCCceEEEcCCC
Confidence 1 13455666443 1 1111100 00111111 22 224443 4577888887766676666544
No 249
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=70.61 E-value=64 Score=29.47 Aligned_cols=72 Identities=10% Similarity=0.032 Sum_probs=44.8
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC--CCCEEEEeC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYIADT 99 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG~LYVAD~ 99 (445)
.-..++++++|.++++-..++.|..++..+.....+..+.|. .+ .-.+|++.+ +|+++++=.
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH--------~~--------~V~~v~~s~~~~g~~l~s~s 74 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGH--------EG--------PVWRVDWAHPKFGTILASCS 74 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCC--------SS--------CEEEEEECCGGGCSEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccc--------cC--------CeEEEEecCCCcCCEEEEEc
Confidence 346899999999999888888899888653110112222221 01 123677754 377666655
Q ss_pred CCCEEEEEcC
Q 013321 100 MNMAIRKISD 109 (445)
Q Consensus 100 ~N~rIrkfd~ 109 (445)
..+.|+..|.
T Consensus 75 ~D~~v~iWd~ 84 (297)
T 2pm7_B 75 YDGKVMIWKE 84 (297)
T ss_dssp TTTEEEEEEB
T ss_pred CCCEEEEEEc
Confidence 6677887774
No 250
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=70.59 E-value=64 Score=30.12 Aligned_cols=67 Identities=7% Similarity=0.106 Sum_probs=39.1
Q ss_pred EEEcCCCc-E-EEEe-CCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeCCC
Q 013321 26 VAVSPSGE-L-LVLD-SENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMN 101 (445)
Q Consensus 26 IAVdpdG~-L-YVaD-s~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~~N 101 (445)
++++|||. | |+++ .++.+|+.++..+ |+...+..... ....++++.++|. |+++.. +
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~---g~~~~lt~~~~---------------~~~~~~~~spdg~~l~~~~~-~ 101 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNT---QVATQLTEGRG---------------DNTFGGFLSPDDDALFYVKD-G 101 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTT---CEEEECCCSSC---------------BCSSSCEECTTSSEEEEEET-T
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCC---CceEEeeeCCC---------------CCccceEEcCCCCEEEEEeC-C
Confidence 67899997 4 4444 2345799998874 44444332110 0112457888887 555553 4
Q ss_pred CEEEEEcCCC
Q 013321 102 MAIRKISDTG 111 (445)
Q Consensus 102 ~rIrkfd~dG 111 (445)
..|+++|..+
T Consensus 102 ~~l~~~d~~~ 111 (388)
T 3pe7_A 102 RNLMRVDLAT 111 (388)
T ss_dssp TEEEEEETTT
T ss_pred CeEEEEECCC
Confidence 6788888544
No 251
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=70.41 E-value=79 Score=30.43 Aligned_cols=29 Identities=17% Similarity=0.133 Sum_probs=22.5
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTS 50 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~d 50 (445)
.-.+|+++++|+++++-+.++.|..++..
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg~v~iWd~~ 177 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSAEVQLWDVQ 177 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEcC
Confidence 35788888888877777777888888765
No 252
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=70.37 E-value=85 Score=33.33 Aligned_cols=121 Identities=9% Similarity=0.037 Sum_probs=66.7
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
.-..|+.|.+|+|||.- . +-+.+++........+..+.-.. ....+ .-+....|+.|.+|+|||+-.
T Consensus 325 ~v~~i~~D~~g~lWiGt-~-~Gl~~~~~~~~~~~~~~~~~~~~------~~~~l---~~~~v~~i~~d~~g~lWigt~-- 391 (758)
T 3ott_A 325 QFYSLFRDSKGFYWFGG-A-NGLIRFTDPAGERHDAIWYRMGD------KTYPL---SHNRIRHIYEDKEQQLWIATD-- 391 (758)
T ss_dssp BEEEEEECTTCCEEEEE-T-TEEEEESCTTSSCCCCEEECTTC------SSSCC---SCSCEEEEEECTTSCEEEEET--
T ss_pred eEEEEEEcCCCCEEEee-C-CcceeecccccccceeEEeccCC------cCCCC---CCCceEEEEECCCCCEEEEeC--
Confidence 34678889999999986 3 46888876521111222221100 00000 113456899999999999863
Q ss_pred CEEEEEcCCC-cEE-EecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC
Q 013321 102 MAIRKISDTG-VTT-IAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 167 (445)
Q Consensus 102 ~rIrkfd~dG-v~t-iaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~ 167 (445)
+-|.+++... ..+ +.... . .+ . ..-..-.+| +.|.+|.|||+-.+ +-|.+++..
T Consensus 392 ~GL~~~~~~~~~~~~~~~~~-~--~~----~---~~~~~v~~i-~~d~~g~lWigT~~-~Gl~~~~~~ 447 (758)
T 3ott_A 392 GSINRYDYATRQFIHYNIVD-N--TG----T---YNTNWTYYI-FEDTAGQLWISTCL-GGIFVVDKH 447 (758)
T ss_dssp TEEEEEETTTTEEEEEEEEC-C--C---------CBSSSEEEE-EECTTSEEEEEESS-SCEEEEEHH
T ss_pred CcHhhcCcCCCcEEEeecCC-C--cC----C---CCCceEEEE-EEcCCCCEEEEECC-CceEEEccc
Confidence 4799999654 222 11000 0 00 0 001122345 46889999998654 356777643
No 253
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=68.63 E-value=82 Score=29.91 Aligned_cols=86 Identities=8% Similarity=0.001 Sum_probs=48.8
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-cEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~-v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....|+++++|.++++-.. +.|..++.... ++ +..+.+.. ..............+.....+++.++|.++++=..
T Consensus 287 ~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~--~~~~~~~~~~~-~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~ 362 (447)
T 3dw8_B 287 SISDVKFSHSGRYMMTRDY-LSVKVWDLNME--NRPVETYQVHE-YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSY 362 (447)
T ss_dssp CEEEEEECTTSSEEEEEES-SEEEEEETTCC--SSCSCCEESCG-GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECS
T ss_pred eEEEEEECCCCCEEEEeeC-CeEEEEeCCCC--ccccceeeccc-cccccccccccccccccceEEEECCCCCEEEEecc
Confidence 4578999999998777766 89999987521 11 12222110 00000000000000111234899999997777777
Q ss_pred CCEEEEEcCCC
Q 013321 101 NMAIRKISDTG 111 (445)
Q Consensus 101 N~rIrkfd~dG 111 (445)
++.|+.+|...
T Consensus 363 dg~v~iwd~~~ 373 (447)
T 3dw8_B 363 NNFFRMFDRNT 373 (447)
T ss_dssp TTEEEEEETTT
T ss_pred CCEEEEEEcCC
Confidence 88999999543
No 254
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=68.29 E-value=1.1e+02 Score=32.67 Aligned_cols=76 Identities=11% Similarity=0.068 Sum_probs=50.5
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-----cEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEE
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-----PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYI 96 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~-----v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYV 96 (445)
.-.+++++|||.+.++-+.++.|..++..+..... +.++-+.. .|+ .+.-..|++.++| ++
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~---~gh---------~~~V~sVawSPdg--La 196 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD---AGS---------KDWVTHIVWYEDV--LV 196 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC---TTC---------CCCEEEEEEETTE--EE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc---ccc---------cccEEEEEEcCCc--EE
Confidence 46789999999988888889999999987532111 12332211 111 2345689999999 45
Q ss_pred EeCCCCEEEEEcCCC
Q 013321 97 ADTMNMAIRKISDTG 111 (445)
Q Consensus 97 AD~~N~rIrkfd~dG 111 (445)
+=...+.|+..+.++
T Consensus 197 ass~D~tVrlWd~~~ 211 (588)
T 2j04_A 197 AALSNNSVFSMTVSA 211 (588)
T ss_dssp EEETTCCEEEECCCS
T ss_pred EEeCCCeEEEEECCC
Confidence 555577888888655
No 255
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=66.38 E-value=79 Score=34.87 Aligned_cols=69 Identities=10% Similarity=0.102 Sum_probs=45.8
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 99 (445)
.....|+++|+|.++++-..++.|+.++..+ ++....... . ..-..|++.+ |. |+.++
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~---~~~~~~~~~--------~--------~~V~~l~fsp-g~~L~S~s- 76 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ---VEVVIKLED--------R--------SAIKEMRFVK-GIYLVVIN- 76 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTT---CEEEEECSS--------C--------CCEEEEEEET-TTEEEEEE-
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCC---cEEEEEcCC--------C--------CCEEEEEEcC-CCEEEEEE-
Confidence 3578999999999999888889999998652 222211110 0 0235888888 77 44444
Q ss_pred CCCEEEEEcCC
Q 013321 100 MNMAIRKISDT 110 (445)
Q Consensus 100 ~N~rIrkfd~d 110 (445)
..+.|+..|..
T Consensus 77 ~D~~v~lWd~~ 87 (902)
T 2oaj_A 77 AKDTVYVLSLY 87 (902)
T ss_dssp TTCEEEEEETT
T ss_pred CcCeEEEEECC
Confidence 46788888854
No 256
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=66.08 E-value=21 Score=35.65 Aligned_cols=118 Identities=11% Similarity=-0.089 Sum_probs=63.7
Q ss_pred CceEEEEcCCCcEEE----EeCCCCeEEEEeCCCCCCC-----c-cEEEecCCCCcccCCCCCccCccCCCcceEEEcCC
Q 013321 22 EPFSVAVSPSGELLV----LDSENSNIYKISTSLSPYS-----R-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR 91 (445)
Q Consensus 22 ~P~gIAVdpdG~LYV----aDs~n~rI~kid~dg~~~G-----~-v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d 91 (445)
...+|+++++|.+++ +...++.|..++......+ + +..+. .. .++ -....+|++.++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~---~~h---------~~~V~~v~~~p~ 160 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK-LL---KDA---------GGMVIDMKWNPT 160 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE-CC---CSG---------GGSEEEEEECSS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee-cc---CCC---------CCceEEEEECCC
Confidence 478999999988666 5556678888875411000 0 00010 00 000 123568999986
Q ss_pred -CCEEEEeCCCCEEEEEcCC-CcEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 013321 92 -GNIYIADTMNMAIRKISDT-GVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 92 -G~LYVAD~~N~rIrkfd~d-Gv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~ 168 (445)
++++++=..++.|+.+|.. +....... +. -....++. ..++|..+++-..++.|+.++..+
T Consensus 161 ~~~~las~s~Dg~v~iwD~~~~~~~~~~~------~~---------~~~v~~v~-wspdg~~lasgs~dg~v~iwd~~~ 223 (434)
T 2oit_A 161 VPSMVAVCLADGSIAVLQVTETVKVCATL------PS---------TVAVTSVC-WSPKGKQLAVGKQNGTVVQYLPTL 223 (434)
T ss_dssp CTTEEEEEETTSCEEEEEESSSEEEEEEE------CG---------GGCEEEEE-ECTTSSCEEEEETTSCEEEECTTC
T ss_pred CCCEEEEEECCCeEEEEEcCCCcceeecc------CC---------CCceeEEE-EcCCCCEEEEEcCCCcEEEEccCC
Confidence 7777755567788888843 32221110 00 01233444 355565555555667777777663
No 257
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=66.02 E-value=79 Score=29.84 Aligned_cols=74 Identities=12% Similarity=0.153 Sum_probs=40.2
Q ss_pred EEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCc--ceEEEcCCCCEEEEeCCCCE
Q 013321 26 VAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHP--KGLAVDDRGNIYIADTMNMA 103 (445)
Q Consensus 26 IAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P--~GIavD~dG~LYVAD~~N~r 103 (445)
.+++ +|.||+++. ++.|+.++... |+............. ......+ ..++++ +|.|||+.. ++.
T Consensus 49 p~v~-~~~v~~~~~-~g~v~a~d~~t---G~~~W~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~v~v~~~-~g~ 114 (376)
T 3q7m_A 49 PALA-DNVVYAADR-AGLVKALNADD---GKEIWSVSLAEKDGW-------FSKEPALLSGGVTVS-GGHVYIGSE-KAQ 114 (376)
T ss_dssp CEEE-TTEEEEECT-TSEEEEEETTT---CCEEEEEECCC---C-------CSCCCCCEEEEEEEE-TTEEEEEET-TSE
T ss_pred cEEE-CCEEEEEcC-CCeEEEEEccC---CceeeeecCcccccc-------ccccCcccccCceEe-CCEEEEEcC-CCE
Confidence 3443 578998874 56899999862 454332221100000 0000111 234444 678999875 578
Q ss_pred EEEEcC-CCcE
Q 013321 104 IRKISD-TGVT 113 (445)
Q Consensus 104 Irkfd~-dGv~ 113 (445)
|..+|. +|..
T Consensus 115 l~a~d~~tG~~ 125 (376)
T 3q7m_A 115 VYALNTSDGTV 125 (376)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCCE
Confidence 999995 4743
No 258
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=65.25 E-value=50 Score=35.41 Aligned_cols=75 Identities=11% Similarity=0.058 Sum_probs=48.6
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM 100 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~ 100 (445)
....+++++|+|.+.++-+.++.|+.++.. +.+..+. . ...... ..-..|++.|+|.+.++=..
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~----~~l~~l~--~-------~~~~~~---~sv~svafSPDG~~LAsgs~ 149 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDN----KMLTNLD--S-------KGNLSS---RTYHCFEWNPIESSIVVGNE 149 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETT----EEEEECC--C-------SSCSTT---TCEEEEEECSSSSCEEEEET
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCC----ceeeecc--C-------CCcccc---ccEEEEEEcCCCCEEEEEcC
Confidence 346899999999988887788889888854 2222211 1 000000 12348999999995555555
Q ss_pred CCEEEEEcCCC
Q 013321 101 NMAIRKISDTG 111 (445)
Q Consensus 101 N~rIrkfd~dG 111 (445)
.+.|+.+|..+
T Consensus 150 DGtVkIWd~~~ 160 (588)
T 2j04_A 150 DGELQFFSIRK 160 (588)
T ss_dssp TSEEEEEECCC
T ss_pred CCEEEEEECCC
Confidence 78899998543
No 259
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=64.25 E-value=78 Score=28.08 Aligned_cols=70 Identities=16% Similarity=0.168 Sum_probs=39.5
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
....++++++|.++++-..++.|..++......++...... ++ -..-..|+++ ++++++=..+
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~------~~---------~~~i~~~~~~--~~~l~~~~~d 123 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI------GH---------QGNVCSLSFQ--DGVVISGSWD 123 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC------CC---------SSCEEEEEEE--TTEEEEEETT
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh------hc---------ccCEEEEEec--CCEEEEEeCC
Confidence 46788888888877777777888777754221111111110 00 1123466663 4555544457
Q ss_pred CEEEEEc
Q 013321 102 MAIRKIS 108 (445)
Q Consensus 102 ~rIrkfd 108 (445)
+.|+.+|
T Consensus 124 ~~i~~~d 130 (313)
T 3odt_A 124 KTAKVWK 130 (313)
T ss_dssp SEEEEEE
T ss_pred CCEEEEc
Confidence 7888888
No 260
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=61.77 E-value=31 Score=36.93 Aligned_cols=72 Identities=11% Similarity=0.077 Sum_probs=45.1
Q ss_pred CceEEEEcCC--CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCC--CCEEEE
Q 013321 22 EPFSVAVSPS--GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR--GNIYIA 97 (445)
Q Consensus 22 ~P~gIAVdpd--G~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d--G~LYVA 97 (445)
.-.+|+++++ |+++++-..++.|..++... ++...+... .++ -.....|++.++ |.++++
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~---~~~~~~~~~----~~h---------~~~V~~v~~sp~~~~~~l~s 118 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEEN---GRWSQIAVH----AVH---------SASVNSVQWAPHEYGPLLLV 118 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEET---TEEEEEEEE----CCC---------SSCEEEEEECCGGGCSEEEE
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCC---Ccccccccc----cCC---------CCCeEEEEECCCCCCCEEEE
Confidence 3567888776 78777777788888887653 321111110 000 123458888887 776666
Q ss_pred eCCCCEEEEEcC
Q 013321 98 DTMNMAIRKISD 109 (445)
Q Consensus 98 D~~N~rIrkfd~ 109 (445)
=..++.|+.+|.
T Consensus 119 gs~dg~I~vwdl 130 (753)
T 3jro_A 119 ASSDGKVSVVEF 130 (753)
T ss_dssp EETTSEEEEEEC
T ss_pred EeCCCcEEEEEe
Confidence 666788888884
No 261
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=60.49 E-value=1.2e+02 Score=28.93 Aligned_cols=86 Identities=15% Similarity=0.092 Sum_probs=53.7
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcC-CCcEEEEeCCCCeEEEEeCCC---CCCCccEEEecCCCCcccCCCCCccCccCC
Q 013321 6 GGYTVETVFEGSKFGMEPFSVAVSP-SGELLVLDSENSNIYKISTSL---SPYSRPKLVAGSPEGYYGHVDGRPRGARMN 81 (445)
Q Consensus 6 ~G~~v~tv~~Gs~~g~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg---~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln 81 (445)
+|..+..+..+... .-.+|++++ +|.++++-..++.|..++... ...-+.....+. -.
T Consensus 51 ~g~~~~~~~~~h~~--~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h----------------~~ 112 (437)
T 3gre_A 51 RGKLIATLMENEPN--SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDC----------------SS 112 (437)
T ss_dssp CCCEEEEECTTTTS--CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEEC----------------SS
T ss_pred cceEEeeeccCCCC--ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccC----------------CC
Confidence 45555555444332 468999999 999999888889999888642 100000011010 11
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEEEcC
Q 013321 82 HPKGLAVDDRGNIYIADTMNMAIRKISD 109 (445)
Q Consensus 82 ~P~GIavD~dG~LYVAD~~N~rIrkfd~ 109 (445)
...+|++.+++.++++=...+.|+.+|.
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~ 140 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKV 140 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEe
Confidence 3458999998886666556777887764
No 262
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=60.19 E-value=75 Score=29.17 Aligned_cols=56 Identities=14% Similarity=0.230 Sum_probs=32.2
Q ss_pred CceEEEEcCCCc-EEE-EeC---CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EE
Q 013321 22 EPFSVAVSPSGE-LLV-LDS---ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IY 95 (445)
Q Consensus 22 ~P~gIAVdpdG~-LYV-aDs---~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LY 95 (445)
....++++|||. |++ .+. +...|+.++.++ |+...+.... ...++++.++|. |+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~---g~~~~l~~~~-----------------~~~~~~wspdg~~l~ 119 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLET---LSSKKILEAK-----------------NIRSLEWNEDSRKLL 119 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT---TEEEEEEEES-----------------EEEEEEECTTSSEEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC---CceEEEEcCC-----------------CccceeECCCCCEEE
Confidence 356788999886 433 332 234588887763 4444333211 034778888887 55
Q ss_pred EE
Q 013321 96 IA 97 (445)
Q Consensus 96 VA 97 (445)
++
T Consensus 120 ~~ 121 (347)
T 2gop_A 120 IV 121 (347)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 263
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=58.59 E-value=1.2e+02 Score=28.19 Aligned_cols=68 Identities=13% Similarity=0.171 Sum_probs=40.2
Q ss_pred ceEEEEcCCCc-EEEE-e-CCCCe--EEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC-CCCEEE
Q 013321 23 PFSVAVSPSGE-LLVL-D-SENSN--IYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYI 96 (445)
Q Consensus 23 P~gIAVdpdG~-LYVa-D-s~n~r--I~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-dG~LYV 96 (445)
+..++++|+|. |+++ . .+... |++++..+ ++...+...+ + . .+++.+ +|.+++
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~---g~~~~l~~~~--------~------~----~~~~s~~dg~~l~ 298 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET---LENEEVMVMP--------P------C----SHLMSNFDGSLMV 298 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT---CCEEEEEECC--------S------E----EEEEECSSSSEEE
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCC---CCeEEeeeCC--------C------C----CCCccCCCCceEE
Confidence 55678999887 4444 2 23334 88888763 4444433211 0 1 167777 888776
Q ss_pred EeC----------------CCCEEEEEcCCC
Q 013321 97 ADT----------------MNMAIRKISDTG 111 (445)
Q Consensus 97 AD~----------------~N~rIrkfd~dG 111 (445)
+.. ++..|.++|.++
T Consensus 299 ~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 299 GDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp EEECCC----------CCCCCCEEEEEETTT
T ss_pred EecCCcceeeccccccccCCCCcEEEEeccc
Confidence 532 346799998543
No 264
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=58.14 E-value=1.9e+02 Score=30.64 Aligned_cols=118 Identities=12% Similarity=0.098 Sum_probs=65.4
Q ss_pred CceEEEEcCC--CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC---------
Q 013321 22 EPFSVAVSPS--GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--------- 90 (445)
Q Consensus 22 ~P~gIAVdpd--G~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--------- 90 (445)
....++++|+ |.++++-..++.|..++...........+.+. -..-..|++.+
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~----------------~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC----------------SSCEEEEEECCCC-------
T ss_pred CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC----------------CCceEEEEecCccccccccc
Confidence 4678888887 88888777888888888753211112222111 11234666666
Q ss_pred ----CCCEEEEeCCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCC---CeEEEEECCCCe
Q 013321 91 ----RGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS---CSLLVIDRGNQA 160 (445)
Q Consensus 91 ----dG~LYVAD~~N~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~d---G~LyVaD~gn~r 160 (445)
+|.++++-..++.|+.+|.. + ......... +. -....++. ..++ +.++++-...+.
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~----~h---------~~~V~~l~-~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE----GH---------SDWVRDVA-WSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC----CC---------SSCEEEEE-ECCCCSSSEEEEEEESSSC
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec----CC---------CCcEEEEE-eccCCCCCCEEEEEecCCE
Confidence 46666665567778888732 2 111111000 00 01223444 4555 777777777788
Q ss_pred EEEEECCCC
Q 013321 161 IREIQLHDD 169 (445)
Q Consensus 161 Ir~i~l~~~ 169 (445)
|+.+++...
T Consensus 231 I~iwd~~~~ 239 (753)
T 3jro_A 231 CIIWTQDNE 239 (753)
T ss_dssp EEEEEESSS
T ss_pred EEEecCCCC
Confidence 888887653
No 265
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=57.86 E-value=90 Score=32.25 Aligned_cols=30 Identities=10% Similarity=0.117 Sum_probs=20.2
Q ss_pred CceEEEEcCCCcEEEEeCC---------CCeEEEEeCCC
Q 013321 22 EPFSVAVSPSGELLVLDSE---------NSNIYKISTSL 51 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~---------n~rI~kid~dg 51 (445)
....++++|||..+++-.. .+.|+.++..+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC
Confidence 3678999999984443322 26777888763
No 266
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=57.79 E-value=62 Score=32.80 Aligned_cols=71 Identities=15% Similarity=0.148 Sum_probs=36.1
Q ss_pred ceEEEEcCCCcEE-EEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC--
Q 013321 23 PFSVAVSPSGELL-VLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT-- 99 (445)
Q Consensus 23 P~gIAVdpdG~LY-VaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~-- 99 (445)
-+.|++++||..+ ++...++.+..+..++ |....+.... ......+++.++..||++|.
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~---g~~~~lt~~~---------------~~~~~~~~~spd~~l~~~~~~~ 85 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDG---GETVKLNREP---------------INSVLDPHYGVGRVILVRDVSK 85 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEET---TEEEECCSSC---------------CSEECEECTTCSEEEEEEECST
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcC---CCcEeeeccc---------------ccccccccCCCCeEEEEeccCC
Confidence 5788999999733 3222233433333332 3443333211 01123556666644777775
Q ss_pred C--CCEEEEEcC--CC
Q 013321 100 M--NMAIRKISD--TG 111 (445)
Q Consensus 100 ~--N~rIrkfd~--dG 111 (445)
+ +.+|..++. +|
T Consensus 86 g~~~~~l~~~~~~~~g 101 (582)
T 3o4h_A 86 GAEQHALFKVNTSRPG 101 (582)
T ss_dssp TSCCEEEEEEETTSTT
T ss_pred CCcceEEEEEeccCCC
Confidence 2 336777776 55
No 267
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=57.29 E-value=1.2e+02 Score=27.83 Aligned_cols=27 Identities=7% Similarity=-0.171 Sum_probs=16.5
Q ss_pred ceEEEcCCCCEEEEeCC--------CCEEEEEcCCC
Q 013321 84 KGLAVDDRGNIYIADTM--------NMAIRKISDTG 111 (445)
Q Consensus 84 ~GIavD~dG~LYVAD~~--------N~rIrkfd~dG 111 (445)
..+++.++|.+|++... ..+|..++ .|
T Consensus 174 ~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d-~~ 208 (347)
T 2gop_A 174 SSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE-DG 208 (347)
T ss_dssp CEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE-TT
T ss_pred ccccCCCCeEEEEEecccccccccccccEEEeC-CC
Confidence 46778888833344332 34788888 55
No 268
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=57.16 E-value=82 Score=34.73 Aligned_cols=29 Identities=7% Similarity=0.044 Sum_probs=24.2
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTS 50 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~d 50 (445)
...+|+++|+|.++++-..++.|..++.+
T Consensus 490 ~V~svafspdg~~LAsgs~DgtV~lwd~~ 518 (902)
T 2oaj_A 490 AVDKISFAAETLELAVSIETGDVVLFKYE 518 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ceeEEEecCCCCeEEEEecCcEEEEEEec
Confidence 56899999999988888888888877754
No 269
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=55.49 E-value=1.3e+02 Score=27.76 Aligned_cols=112 Identities=12% Similarity=0.096 Sum_probs=60.8
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC------CCCEE
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD------RGNIY 95 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~------dG~LY 95 (445)
....|++++++.++++-..++.|..++..+ ..+..+.+.. ..-..+++.+ ++.++
T Consensus 109 ~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~---~~~~~~~~h~----------------~~v~~~~~~~~~~~~~~~~~l 169 (319)
T 3frx_A 109 DVMSVDIDKKASMIISGSRDKTIKVWTIKG---QCLATLLGHN----------------DWVSQVRVVPNEKADDDSVTI 169 (319)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTS---CEEEEECCCS----------------SCEEEEEECCC------CCEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCC---CeEEEEeccC----------------CcEEEEEEccCCCCCCCccEE
Confidence 357888989888888888888888888763 2222332211 1122444443 34455
Q ss_pred EEeCCCCEEEEEcCCCc---EEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc
Q 013321 96 IADTMNMAIRKISDTGV---TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 170 (445)
Q Consensus 96 VAD~~N~rIrkfd~dGv---~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~i~l~~~~ 170 (445)
++=...+.|+..|.... ..+.+.. ..-.++. ..++|.++++-...+.|+..++....
T Consensus 170 ~s~~~d~~i~~wd~~~~~~~~~~~~h~-----------------~~v~~~~-~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 170 ISAGNDKMVKAWNLNQFQIEADFIGHN-----------------SNINTLT-ASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCC-----------------SCEEEEE-ECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred EEEeCCCEEEEEECCcchhheeecCCC-----------------CcEEEEE-EcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 55555667777775431 1221100 0112333 45666666665566677777765543
No 270
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=55.15 E-value=1.3e+02 Score=27.92 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=20.0
Q ss_pred ceEEEEcCCCcE--EEEeC-CCCeEEEEeCCC
Q 013321 23 PFSVAVSPSGEL--LVLDS-ENSNIYKISTSL 51 (445)
Q Consensus 23 P~gIAVdpdG~L--YVaDs-~n~rI~kid~dg 51 (445)
+..++++|||.. |+++. ++..|+.++..+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~ 69 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET 69 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCC
Confidence 567789999973 44443 445788888764
No 271
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=54.43 E-value=97 Score=28.58 Aligned_cols=70 Identities=14% Similarity=0.106 Sum_probs=43.8
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCcc---EEEecCCCCcccCCCCCccCccCCCcceEEEcC--CCCEEE
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRP---KLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYI 96 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v---~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~--dG~LYV 96 (445)
.-..|+++++|+++++-+.++.|..++... +.. ..+.| + .+ .-..|++.+ +|++++
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~---~~~~~~~~l~g-------H-~~--------~V~~v~~~~~~~~~~l~ 75 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRN---GGQILIADLRG-------H-EG--------PVWQVAWAHPMYGNILA 75 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEET---TEEEEEEEEEC-------C-SS--------CEEEEEECCGGGSSCEE
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecC---CCcEEEEEEcC-------C-Cc--------cEEEEEeCCCCCCCEEE
Confidence 357899999999989888888888888652 221 12222 1 01 124677754 366555
Q ss_pred EeCCCCEEEEEcCC
Q 013321 97 ADTMNMAIRKISDT 110 (445)
Q Consensus 97 AD~~N~rIrkfd~d 110 (445)
+=...+.|+..|..
T Consensus 76 s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 76 SCSYDRKVIIWREE 89 (316)
T ss_dssp EEETTSCEEEECCS
T ss_pred EEECCCEEEEEECC
Confidence 54556778887743
No 272
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=54.09 E-value=1e+02 Score=34.18 Aligned_cols=73 Identities=16% Similarity=0.259 Sum_probs=46.9
Q ss_pred CCceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEEeC
Q 013321 21 MEPFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVAD~ 99 (445)
..+..++++|||..+++-...+.|+.++..+ |++..+.... -....++++.++|. |.++..
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t---g~~~~~~~~~---------------~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLET---GKPTVIERSR---------------EAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTT---CCEEEEEECS---------------SSCCCCEEECTTSCEEEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCC---CceEEeccCC---------------CCCccceEECCCCCeEEEEec
Confidence 4578999999998665555667899999863 5555544211 01225788999998 433322
Q ss_pred ---------CCCEEEEEcCCC
Q 013321 100 ---------MNMAIRKISDTG 111 (445)
Q Consensus 100 ---------~N~rIrkfd~dG 111 (445)
....|+.+|.++
T Consensus 441 ~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEETTT
T ss_pred CccccccCCCCCeEEEEECCC
Confidence 235788888654
No 273
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=53.41 E-value=1.1e+02 Score=28.92 Aligned_cols=29 Identities=14% Similarity=0.119 Sum_probs=24.9
Q ss_pred CceEEEEcCCCcEEEEeCCCCeEEEEeCC
Q 013321 22 EPFSVAVSPSGELLVLDSENSNIYKISTS 50 (445)
Q Consensus 22 ~P~gIAVdpdG~LYVaDs~n~rI~kid~d 50 (445)
.-.+|+++|+|.++++-+.++.|..++..
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred cEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 46789999999988888888899998875
No 274
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=51.95 E-value=34 Score=35.64 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=44.6
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCC-EEEE-eC-
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIA-DT- 99 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~-LYVA-D~- 99 (445)
+.++++.++|.+++++ .++.|+.++..+ |+...+..... .. . .....+++.+||. |.++ +.
T Consensus 18 ~~~~~~s~dg~~~~~~-~d~~i~~~~~~~---g~~~~~~~~~~-~~----------~-~~~~~~~~SpDg~~la~~~~~~ 81 (719)
T 1z68_A 18 TFFPNWISGQEYLHQS-ADNNIVLYNIET---GQSYTILSNRT-MK----------S-VNASNYGLSPDRQFVYLESDYS 81 (719)
T ss_dssp CCCCEESSSSEEEEEC-TTSCEEEEESSS---CCEEEEECHHH-HH----------T-TTCSEEEECTTSSEEEEEEEEE
T ss_pred CCccEECCCCeEEEEc-CCCCEEEEEcCC---CcEEEEEcccc-cc----------c-cceeeEEECCCCCeEEEEecCc
Confidence 4488999999765555 477899999874 44444432110 00 0 0245889999998 4333 31
Q ss_pred ------CCCEEEEEcCCC
Q 013321 100 ------MNMAIRKISDTG 111 (445)
Q Consensus 100 ------~N~rIrkfd~dG 111 (445)
....|+.+|.++
T Consensus 82 ~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 82 KLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp ECSSSCEEEEEEEEETTT
T ss_pred eeEEeecceEEEEEECCC
Confidence 136788888654
No 275
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=51.74 E-value=1.4e+02 Score=27.14 Aligned_cols=119 Identities=12% Similarity=0.095 Sum_probs=65.7
Q ss_pred CCceEEEEcCC--CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcC--------
Q 013321 21 MEPFSVAVSPS--GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-------- 90 (445)
Q Consensus 21 ~~P~gIAVdpd--G~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~-------- 90 (445)
.....++++++ |.++++-..++.|..++...........+.+. -..-..+++.+
T Consensus 102 ~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 102 ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC----------------TTCEEEEEECCCC------
T ss_pred cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC----------------CCceEEEEEcCcccccccc
Confidence 34678899887 88877777788888888763211111111111 11234677776
Q ss_pred -----CCCEEEEeCCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCC---CeEEEEECCCC
Q 013321 91 -----RGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS---CSLLVIDRGNQ 159 (445)
Q Consensus 91 -----dG~LYVAD~~N~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~d---G~LyVaD~gn~ 159 (445)
++.++++=..++.|+.+|.. + ...+..... +. -....++. ..++ +.++++-...+
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~h---------~~~v~~~~-~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE----GH---------SDWVRDVA-WSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC----CC---------SSCEEEEE-ECCCCSSSEEEEEEETTS
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe----cc---------cCcEeEEE-ECCCCCCCCeEEEEeCCC
Confidence 57766666667778888732 2 111111000 00 01123444 4555 66666666677
Q ss_pred eEEEEECCCC
Q 013321 160 AIREIQLHDD 169 (445)
Q Consensus 160 rIr~i~l~~~ 169 (445)
.|+.+++...
T Consensus 232 ~i~iwd~~~~ 241 (379)
T 3jrp_A 232 TCIIWTQDNE 241 (379)
T ss_dssp CEEEEEESST
T ss_pred EEEEEeCCCC
Confidence 7777776653
No 276
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=51.11 E-value=1.6e+02 Score=31.19 Aligned_cols=16 Identities=31% Similarity=0.499 Sum_probs=10.4
Q ss_pred CCCcEEEEeCCCCeEE
Q 013321 30 PSGELLVLDSENSNIY 45 (445)
Q Consensus 30 pdG~LYVaDs~n~rI~ 45 (445)
.+|.||+.|..++.++
T Consensus 322 ~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 322 KNGFFYVLDRTNGKLI 337 (668)
T ss_dssp TTSEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCCEe
Confidence 3667777777666654
No 277
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=48.43 E-value=47 Score=35.85 Aligned_cols=75 Identities=19% Similarity=0.267 Sum_probs=51.2
Q ss_pred CCceEEEEcCCCc-EEEEeCCCCeEEEEeCCCC---CCCc----cEEEecCCCCcccCCCCCccCccCCCcceEEEcCCC
Q 013321 21 MEPFSVAVSPSGE-LLVLDSENSNIYKISTSLS---PYSR----PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG 92 (445)
Q Consensus 21 ~~P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~---~~G~----v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG 92 (445)
++|+|+-++|||. ++|++-...+|.+++-..- +.+. -.++++..+ . =-.|.-.++|++|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~-----------GlGPlHt~Fd~~G 389 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--L-----------GLGPLHTTFDGRG 389 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--C-----------CSCEEEEEECSSS
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--C-----------CCcccEEEECCCC
Confidence 8899999999998 7777777888888875310 0000 011111111 1 1268899999999
Q ss_pred CEEEEeCCCCEEEEEc
Q 013321 93 NIYIADTMNMAIRKIS 108 (445)
Q Consensus 93 ~LYVAD~~N~rIrkfd 108 (445)
+.|.+=.-...|.+.+
T Consensus 390 ~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 390 NAYTTLFIDSQVVKWN 405 (638)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred ceEeeeeecceEEEEe
Confidence 9999988788888866
No 278
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=46.81 E-value=3.3e+02 Score=29.99 Aligned_cols=29 Identities=14% Similarity=0.213 Sum_probs=20.7
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEEEEcCC
Q 013321 82 HPKGLAVDDRGNIYIADTMNMAIRKISDT 110 (445)
Q Consensus 82 ~P~GIavD~dG~LYVAD~~N~rIrkfd~d 110 (445)
.+..+++.++|..+++-...+.|+.+|..
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~ 408 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLE 408 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECC
Confidence 45689999999844433345689999954
No 279
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=46.63 E-value=1.6e+02 Score=26.17 Aligned_cols=28 Identities=18% Similarity=0.170 Sum_probs=20.5
Q ss_pred ceEEEEcCCCcEEEEeCCCCeEEEEeCC
Q 013321 23 PFSVAVSPSGELLVLDSENSNIYKISTS 50 (445)
Q Consensus 23 P~gIAVdpdG~LYVaDs~n~rI~kid~d 50 (445)
-.+|+++++|+++++-+.++.|..++..
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~ 97 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQ 97 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecC
Confidence 4677787877777777777777777765
No 280
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=44.33 E-value=1.9e+02 Score=30.61 Aligned_cols=25 Identities=16% Similarity=0.264 Sum_probs=16.6
Q ss_pred EEEECCCCeEEEEECCCCeE-EEEEC
Q 013321 142 VVYVGSSCSLLVIDRGNQAI-REIQL 166 (445)
Q Consensus 142 I~~vd~dG~LyVaD~gn~rI-r~i~l 166 (445)
|+..+.+|.||+.|+.++++ +.+..
T Consensus 330 l~~~~~~G~l~~lD~~tG~~l~~~~~ 355 (677)
T 1kb0_A 330 ILHAPKNGFFFVLDRTNGKFISAKNF 355 (677)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEES
T ss_pred EEEECCCCEEEEEECCCCCEeccccc
Confidence 34456778999999876654 45543
No 281
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=43.19 E-value=1.3e+02 Score=24.20 Aligned_cols=15 Identities=13% Similarity=0.379 Sum_probs=7.7
Q ss_pred eEEEEcCCCcEEEEe
Q 013321 24 FSVAVSPSGELLVLD 38 (445)
Q Consensus 24 ~gIAVdpdG~LYVaD 38 (445)
+.+.+-.||+|.+-+
T Consensus 21 y~l~~q~DgNLvly~ 35 (105)
T 4h3o_A 21 YHFIMQDDCNLVLYD 35 (105)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEECCCCeEEEEE
Confidence 445555555554444
No 282
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=42.59 E-value=53 Score=32.64 Aligned_cols=73 Identities=8% Similarity=0.027 Sum_probs=49.9
Q ss_pred CCceEEEEcCC-CcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeC
Q 013321 21 MEPFSVAVSPS-GELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 99 (445)
Q Consensus 21 ~~P~gIAVdpd-G~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~ 99 (445)
....+|+++|+ ++++++-..++.|..++... +.. .+.-. ++ -....+|+++++|..+++=.
T Consensus 150 ~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~---~~~-~~~~~-----~~---------~~~v~~v~wspdg~~lasgs 211 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE---TVK-VCATL-----PS---------TVAVTSVCWSPKGKQLAVGK 211 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETTSCEEEEEESS---SEE-EEEEE-----CG---------GGCEEEEEECTTSSCEEEEE
T ss_pred CceEEEEECCCCCCEEEEEECCCeEEEEEcCC---Ccc-eeecc-----CC---------CCceeEEEEcCCCCEEEEEc
Confidence 34689999996 78888888889999998762 211 11100 00 12467899999998555444
Q ss_pred CCCEEEEEcCCC
Q 013321 100 MNMAIRKISDTG 111 (445)
Q Consensus 100 ~N~rIrkfd~dG 111 (445)
.++.|+.+|..+
T Consensus 212 ~dg~v~iwd~~~ 223 (434)
T 2oit_A 212 QNGTVVQYLPTL 223 (434)
T ss_dssp TTSCEEEECTTC
T ss_pred CCCcEEEEccCC
Confidence 678899999876
No 283
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=41.86 E-value=2.4e+02 Score=26.90 Aligned_cols=127 Identities=11% Similarity=-0.003 Sum_probs=0.0
Q ss_pred eEEEEcC--------CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCC-CE
Q 013321 24 FSVAVSP--------SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG-NI 94 (445)
Q Consensus 24 ~gIAVdp--------dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG-~L 94 (445)
.+|++.| ||.++++-+..+.|+.++.... +.+....+. -.....|++.|++ ++
T Consensus 140 ~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~--~~~~~~~~~----------------~~~v~~v~~~p~~~~~ 201 (393)
T 4gq1_A 140 NDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE--GPILAGYPL----------------SSPGISVQFRPSNPNQ 201 (393)
T ss_dssp EEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT--EEEEEEEEC----------------SSCEEEEEEETTEEEE
T ss_pred EEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC--ceeeeecCC----------------CCCcEEEEECCCCCce
Q ss_pred EEEeCCCCEEEEEcCCC---cEEEecCcccCC--------CCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCeEEE
Q 013321 95 YIADTMNMAIRKISDTG---VTTIAGGKWSRG--------VGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIRE 163 (445)
Q Consensus 95 YVAD~~N~rIrkfd~dG---v~tiaGg~~G~g--------~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~rIr~ 163 (445)
+++=..++.|+.+|... ............ ...............-..+.+...++..+++-...+.|+.
T Consensus 202 l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~v 281 (393)
T 4gq1_A 202 LIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLR 281 (393)
T ss_dssp EEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEE
T ss_pred EEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEE
Q ss_pred EECCC
Q 013321 164 IQLHD 168 (445)
Q Consensus 164 i~l~~ 168 (445)
.++..
T Consensus 282 wd~~~ 286 (393)
T 4gq1_A 282 WNLFA 286 (393)
T ss_dssp EEC--
T ss_pred EECcc
No 284
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=41.79 E-value=39 Score=35.21 Aligned_cols=67 Identities=16% Similarity=0.131 Sum_probs=38.0
Q ss_pred ceEEEEcCCCcEEE-E-eC-------CCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccC-CCcceEEEcCCC
Q 013321 23 PFSVAVSPSGELLV-L-DS-------ENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARM-NHPKGLAVDDRG 92 (445)
Q Consensus 23 P~gIAVdpdG~LYV-a-Ds-------~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~L-n~P~GIavD~dG 92 (445)
...++++|||...+ + +. ..+.|+.++.++ |+. +.- .++ .....+++.|||
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~---g~~--~~~---------------~~l~~~~~~~~~SPDG 121 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN---GEF--VRG---------------NELPRPIQYLCWSPVG 121 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT---TEE--CCS---------------SCCCSSBCCEEECSST
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC---Ccc--ccc---------------eecCcccccceECCCC
Confidence 56899999998433 3 21 146788888763 221 000 001 124568888888
Q ss_pred C-EEEEeCCCCEEEEEcCCC
Q 013321 93 N-IYIADTMNMAIRKISDTG 111 (445)
Q Consensus 93 ~-LYVAD~~N~rIrkfd~dG 111 (445)
. |.++. ++.|+..+..+
T Consensus 122 ~~la~~~--~~~i~~~~~~~ 139 (719)
T 1z68_A 122 SKLAYVY--QNNIYLKQRPG 139 (719)
T ss_dssp TCEEEEE--TTEEEEESSTT
T ss_pred CEEEEEE--CCeEEEEeCCC
Confidence 7 44443 35788887543
No 285
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=41.37 E-value=3.5e+02 Score=28.65 Aligned_cols=14 Identities=14% Similarity=0.562 Sum_probs=9.9
Q ss_pred ceEEEcCC-CCEEEE
Q 013321 84 KGLAVDDR-GNIYIA 97 (445)
Q Consensus 84 ~GIavD~d-G~LYVA 97 (445)
.++++|++ |.|||.
T Consensus 396 ~~~a~dp~~~~~yv~ 410 (677)
T 1kb0_A 396 HPMSFNPQTGLVYLP 410 (677)
T ss_dssp SCCEEETTTTEEEEE
T ss_pred CCceEcCCCCEEEEe
Confidence 47899985 456764
No 286
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=40.91 E-value=2.6e+02 Score=29.15 Aligned_cols=14 Identities=21% Similarity=0.458 Sum_probs=9.5
Q ss_pred eEEEcC-CCCEEEEe
Q 013321 85 GLAVDD-RGNIYIAD 98 (445)
Q Consensus 85 GIavD~-dG~LYVAD 98 (445)
++++|+ .|.+||..
T Consensus 416 ~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 416 PMAYSQDTGLFYVPA 430 (582)
T ss_dssp CCEECTTTCCEEEEE
T ss_pred CceECCCCCEEEEec
Confidence 678887 45677753
No 287
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=40.11 E-value=3e+02 Score=28.70 Aligned_cols=29 Identities=17% Similarity=0.040 Sum_probs=20.4
Q ss_pred ceEEEEcCCCcE--EEEeCCC---CeEEEEeCCC
Q 013321 23 PFSVAVSPSGEL--LVLDSEN---SNIYKISTSL 51 (445)
Q Consensus 23 P~gIAVdpdG~L--YVaDs~n---~rI~kid~dg 51 (445)
-.+++++|||.. |.++... ..|+.++..+
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 467899999983 4455332 5788888874
No 288
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=40.04 E-value=1.4e+02 Score=23.88 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=14.0
Q ss_pred ceEEEcCCCCEEEEeCCC
Q 013321 84 KGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 84 ~GIavD~dG~LYVAD~~N 101 (445)
.-+.+..+|+|++.|..+
T Consensus 52 ~~l~l~~dGNLvl~~~~~ 69 (109)
T 3dzw_A 52 CHLSMQSDGNLVVYSPRN 69 (109)
T ss_dssp CEEEECTTSCEEEECTTS
T ss_pred EEEEEeCCCCEEEECCCC
Confidence 457788899999988644
No 289
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=38.17 E-value=2.6e+02 Score=27.90 Aligned_cols=69 Identities=10% Similarity=0.102 Sum_probs=38.1
Q ss_pred ceEEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCC
Q 013321 23 PFSVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 23 P~gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N 101 (445)
++.|++ ||. |+|+ .++.|..++...-. +...+.... . ....-+...|.-++++.+|.|++.|..+
T Consensus 90 V~~l~f--d~~~L~v~--~~~~l~v~dv~sl~--~~~~~~~~~-------~-~v~~i~~~~p~~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS--TRNALYSLDLEELS--EFRTVTSFE-------K-PVFQLKNVNNTLVILNSVNDLSALDLRT 155 (388)
T ss_dssp EEEEEE--ETTEEEEE--ESSEEEEEESSSTT--CEEEEEECS-------S-CEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred eeEEEE--CCCEEEEE--cCCcEEEEEchhhh--ccCccceee-------c-ceeeEEecCCCEEEEECCCCEEEEEccC
Confidence 889999 555 6666 56789999865211 111111100 0 0111234455545556788888888875
Q ss_pred CEEE
Q 013321 102 MAIR 105 (445)
Q Consensus 102 ~rIr 105 (445)
....
T Consensus 156 ~~~~ 159 (388)
T 1xip_A 156 KSTK 159 (388)
T ss_dssp CCEE
T ss_pred Cccc
Confidence 5443
No 290
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=38.12 E-value=3.2e+02 Score=28.25 Aligned_cols=112 Identities=16% Similarity=0.116 Sum_probs=0.0
Q ss_pred CCcEEEEeCCCCeEEEEeC-CCCCCCccEEEecCCC-------CcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCC
Q 013321 31 SGELLVLDSENSNIYKIST-SLSPYSRPKLVAGSPE-------GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 102 (445)
Q Consensus 31 dG~LYVaDs~n~rI~kid~-dg~~~G~v~~vaG~~~-------G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~ 102 (445)
+|.|||+...+++|+.++. . .|+..-...... .++..... +++++ +|.|||. +.++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~---tG~~~W~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~v~v~-~~dg 125 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLND---PGKIVWQHKPKQDASTKAVMCCDVVDR-----------GLAYG-AGQIVKK-QANG 125 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTC---TTSEEEEECCCCCGGGGGGCTTCSCCC-----------CCEEE-TTEEEEE-CTTS
T ss_pred CCEEEEEeCCCCEEEEEeCCC---CccEEEEEcCCCCcccccccccccccc-----------ccEEE-CCEEEEE-eCCC
Q ss_pred EEEEEc-CCCcEEEecCcccCCCCCCCCCccCcccCCCceEEEECC-------CCeEEEEECCCCeEE
Q 013321 103 AIRKIS-DTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-------SCSLLVIDRGNQAIR 162 (445)
Q Consensus 103 rIrkfd-~dGv~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~-------dG~LyVaD~gn~rIr 162 (445)
+|..+| .+|........ .+...+......-.--.+.+++.. ++.|+..|..+++++
T Consensus 126 ~l~alD~~tG~~~W~~~~----~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVEV----CDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp EEEEEETTTCCEEEEEEC----CCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred EEEEEECCCCCEEEEecC----CCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEE
No 291
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=37.78 E-value=2.3e+02 Score=28.31 Aligned_cols=69 Identities=16% Similarity=0.166 Sum_probs=48.7
Q ss_pred CCCc--EEEEeCCCC--eEEEEeCCCCCCCccE-EEecCCCCcccCCCCCccCccCCCcc-eEEEcCCCCEEEEeCCCCE
Q 013321 30 PSGE--LLVLDSENS--NIYKISTSLSPYSRPK-LVAGSPEGYYGHVDGRPRGARMNHPK-GLAVDDRGNIYIADTMNMA 103 (445)
Q Consensus 30 pdG~--LYVaDs~n~--rI~kid~dg~~~G~v~-~vaG~~~G~~G~~dG~~~~a~Ln~P~-GIavD~dG~LYVAD~~N~r 103 (445)
.+|. ||..+...+ .|..++++. +++. .+.-..+|..| +..+. ++-+.....|||.+....+
T Consensus 36 ~~~k~yL~~~N~~~~~~~i~~iDL~~---~kl~k~i~~ekEGPNg----------i~~~~~~~~i~~~DsI~i~~~~~~~ 102 (369)
T 3s9j_A 36 ENGKEYLHFENTQKSLYDIVIFDIEN---QQIAKRIPLHKTGPNG----------LPAVFGSRPSPDSQYILVAQNNISR 102 (369)
T ss_dssp ETTEEEEEEEECSTTCCEEEEEETTT---TEEEEEEECBSSSTTB----------CTTCCCEEESSSTTSEEEEEGGGTE
T ss_pred cCCcEEEEEeCCCCCcCcEEEEECCC---CceeeeeccccCCCCC----------cccceeeEEecCCCEEEEEeCCcce
Confidence 4554 777888888 999999873 4433 33322233333 34563 5767778889999999999
Q ss_pred EEEEcCCC
Q 013321 104 IRKISDTG 111 (445)
Q Consensus 104 Irkfd~dG 111 (445)
|..||..|
T Consensus 103 i~l~n~~G 110 (369)
T 3s9j_A 103 LSSINSQG 110 (369)
T ss_dssp EEEECTTC
T ss_pred EEEECCCc
Confidence 99999999
No 292
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=37.31 E-value=1.6e+02 Score=23.61 Aligned_cols=24 Identities=13% Similarity=0.205 Sum_probs=17.7
Q ss_pred CcceEEEcCCCCEEEEeCCCCEEE
Q 013321 82 HPKGLAVDDRGNIYIADTMNMAIR 105 (445)
Q Consensus 82 ~P~GIavD~dG~LYVAD~~N~rIr 105 (445)
.+.-+.+..+|+|.+.|..+..|.
T Consensus 51 ~~~~L~l~~dGnLvL~d~~~~~vW 74 (105)
T 4h3o_A 51 SGCSAVLQSDGNFVVYDSSGRSLW 74 (105)
T ss_dssp CSCEEEECTTSCEEEECTTCCEEE
T ss_pred ccEEEEEeCCccEEEECCCcEEEE
Confidence 455788899999999887654443
No 293
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=36.67 E-value=2.2e+02 Score=25.05 Aligned_cols=127 Identities=15% Similarity=0.062 Sum_probs=64.5
Q ss_pred CCceEEEEcCC--CcEEEEeCCCCeEEEEeCCCCC-CCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCC---CCE
Q 013321 21 MEPFSVAVSPS--GELLVLDSENSNIYKISTSLSP-YSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR---GNI 94 (445)
Q Consensus 21 ~~P~gIAVdpd--G~LYVaDs~n~rI~kid~dg~~-~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d---G~L 94 (445)
....+|+++++ |.++++-..++.|..++..... ........... . ..............+++.++ +.+
T Consensus 111 ~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~p~~~~~~~ 184 (351)
T 3f3f_A 111 GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK-V-----LSIPPANHLQSDFCLSWCPSRFSPEK 184 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE-S-----CSCCCSSCSCCCEEEEECCCSSSCCE
T ss_pred CceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc-c-----cccccCCcccceeEEEeccCCCCCcE
Confidence 34688999998 8888887788999999865321 11111100000 0 00000112345568888875 665
Q ss_pred EEEeCCCCEEEEEc-CCCcE-EEecCcccCCCCCCCCCccCcccCCCceEEEECCCC----eEEEEECCCCeEEEEECCC
Q 013321 95 YIADTMNMAIRKIS-DTGVT-TIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC----SLLVIDRGNQAIREIQLHD 168 (445)
Q Consensus 95 YVAD~~N~rIrkfd-~dGv~-tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG----~LyVaD~gn~rIr~i~l~~ 168 (445)
+++-..++.|...+ ..+.. .+.--. +. -....++. ..+++ .++++-...+.|+.+++..
T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h---------~~~i~~~~-~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 185 LAVSALEQAIIYQRGKDGKLHVAAKLP-----GH---------KSLIRSIS-WAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EEEEETTEEEEEEECTTSCEEEEEECC-----CC---------CSCEEEEE-ECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred EEEecCCCcEEEEccCCCceeeeeecC-----CC---------CcceeEEE-ECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 55544455554444 33322 111000 00 01123443 45555 5666666667777777654
No 294
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=36.02 E-value=3.9e+02 Score=28.14 Aligned_cols=17 Identities=24% Similarity=0.364 Sum_probs=11.3
Q ss_pred cCCCCEEEEeCCCCEEE
Q 013321 89 DDRGNIYIADTMNMAIR 105 (445)
Q Consensus 89 D~dG~LYVAD~~N~rIr 105 (445)
+.+|.||+.|..+++++
T Consensus 321 ~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 321 PKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp CTTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCCEe
Confidence 35677777777766654
No 295
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=34.50 E-value=1.8e+02 Score=23.48 Aligned_cols=18 Identities=17% Similarity=0.158 Sum_probs=13.9
Q ss_pred ceEEEcCCCCEEEEeCCC
Q 013321 84 KGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 84 ~GIavD~dG~LYVAD~~N 101 (445)
.-+.+..+|+|++.|..+
T Consensus 59 ~~l~l~~dGNLVl~d~~~ 76 (113)
T 3mez_B 59 CFMRLGHSGELDITDDRL 76 (113)
T ss_dssp CEEEECTTSCEEEECTTS
T ss_pred EEEEEeCCCcEEEECCCC
Confidence 357788899999988643
No 296
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=32.63 E-value=4.2e+02 Score=27.79 Aligned_cols=21 Identities=14% Similarity=0.213 Sum_probs=13.7
Q ss_pred ECCCCeEEEEECCCCe-EEEEE
Q 013321 145 VGSSCSLLVIDRGNQA-IREIQ 165 (445)
Q Consensus 145 vd~dG~LyVaD~gn~r-Ir~i~ 165 (445)
.+.+|.||+.|+.+++ |+.+.
T Consensus 329 ~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 329 PDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp ECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCCcEEEEEECCCCCEeeccc
Confidence 4677888888875544 44444
No 297
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=32.29 E-value=4.5e+02 Score=27.29 Aligned_cols=27 Identities=4% Similarity=0.101 Sum_probs=18.6
Q ss_pred EEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Q 013321 87 AVDDRGNIYIADTMNMAIRKISD-TGVTT 114 (445)
Q Consensus 87 avD~dG~LYVAD~~N~rIrkfd~-dGv~t 114 (445)
.+...|.||+++. ++.|+.||. +|..+
T Consensus 493 ~~tagglvf~g~~-dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 493 LATAGNLVFTGTG-DGYFKAFDAKSGKEL 520 (582)
T ss_dssp EEETTTEEEEECT-TSEEEEEETTTCCEE
T ss_pred eEeCCCEEEEECC-CCcEEEEECCCCCEE
Confidence 3445677888764 689999994 56433
No 298
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=32.27 E-value=1.3e+02 Score=30.87 Aligned_cols=67 Identities=7% Similarity=0.059 Sum_probs=41.7
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCccCcccCCCceEEEECCCCeEEEEECCCCe
Q 013321 84 KGLAVDDRGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQA 160 (445)
Q Consensus 84 ~GIavD~dG~LYVAD~~N~rIrkfd~d-G--v~tiaGg~~G~g~G~~dgp~~~a~f~~P~gI~~vd~dG~LyVaD~gn~r 160 (445)
..|++.|+|..+++=.....|+.+|.. + +.++.+.. ..-++|+ ..++|.++++-...+.
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~-----------------~~V~sva-~Sp~g~~l~Sgs~Dgt 420 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE-----------------TTITAIG-VSRLHPMVLAGSADGS 420 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS-----------------SCEEEEE-CCSSCCBCEEEETTTE
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC-----------------CceEEEE-eCCCCCeEEEEECCCE
Confidence 579999999888876667788888843 3 24443211 1223443 3566666666666777
Q ss_pred EEEEECCC
Q 013321 161 IREIQLHD 168 (445)
Q Consensus 161 Ir~i~l~~ 168 (445)
|+..++..
T Consensus 421 v~lwd~~~ 428 (524)
T 2j04_B 421 LIITNAAR 428 (524)
T ss_dssp EECCBSCS
T ss_pred EEEEechH
Confidence 77776543
No 299
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=30.77 E-value=3.2e+02 Score=25.14 Aligned_cols=33 Identities=15% Similarity=0.331 Sum_probs=20.5
Q ss_pred EEEEcCCCc-EEEEeCCCCeEEEEeCCCCCCCccEEEe
Q 013321 25 SVAVSPSGE-LLVLDSENSNIYKISTSLSPYSRPKLVA 61 (445)
Q Consensus 25 gIAVdpdG~-LYVaDs~n~rI~kid~dg~~~G~v~~va 61 (445)
+++++|||. |+++. .+..|++++..+ ++...+.
T Consensus 85 ~~~~spdg~~l~~~~-~~~~l~~~d~~~---g~~~~~~ 118 (388)
T 3pe7_A 85 GGFLSPDDDALFYVK-DGRNLMRVDLAT---LEENVVY 118 (388)
T ss_dssp SCEECTTSSEEEEEE-TTTEEEEEETTT---CCEEEEE
T ss_pred ceEEcCCCCEEEEEe-CCCeEEEEECCC---Ccceeee
Confidence 567888886 44444 356788888764 4444443
No 300
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=30.55 E-value=2.1e+02 Score=25.83 Aligned_cols=71 Identities=10% Similarity=0.072 Sum_probs=40.1
Q ss_pred ceEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCC--CCEEEEe
Q 013321 23 PFSVAVSP--SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR--GNIYIAD 98 (445)
Q Consensus 23 P~gIAVdp--dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d--G~LYVAD 98 (445)
-.+|++.+ +|+++++-+.++.|+.++........+..+.+. -..-..|++.++ |.++++=
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h----------------~~~v~~v~~~p~~~g~~l~s~ 119 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH----------------SASVNSVQWAPHEYGPMLLVA 119 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC----------------SSCEEEEEECCGGGCSEEEEE
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC----------------CCceeEEEeCcCCCCcEEEEE
Confidence 35677765 377777777778888777652110011111111 012347788775 6666555
Q ss_pred CCCCEEEEEcC
Q 013321 99 TMNMAIRKISD 109 (445)
Q Consensus 99 ~~N~rIrkfd~ 109 (445)
...+.|+.+|.
T Consensus 120 s~d~~v~~wd~ 130 (297)
T 2pm7_B 120 SSDGKVSVVEF 130 (297)
T ss_dssp ETTSEEEEEEB
T ss_pred ECCCcEEEEEe
Confidence 55677777773
No 301
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=29.76 E-value=3.3e+02 Score=28.87 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=19.8
Q ss_pred eEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Q 013321 85 GLAVDDRGNIYIADTMNMAIRKISD-TGVTT 114 (445)
Q Consensus 85 GIavD~dG~LYVAD~~N~rIrkfd~-dGv~t 114 (445)
+..+...|.||++ +.++.|+.+|. +|..+
T Consensus 480 g~~~tagglvf~g-t~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 480 GTLSTAGNLVFEG-SADGRVIAYAADTGEKL 509 (689)
T ss_dssp CEEEETTTEEEEE-CTTSEEEEEETTTCCEE
T ss_pred ccceECCCEEEEE-CCCCcEEEEECCCCccc
Confidence 4555566778887 45789999994 56433
No 302
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=28.70 E-value=11 Score=40.78 Aligned_cols=11 Identities=27% Similarity=0.280 Sum_probs=5.6
Q ss_pred cCCCcccCcchh
Q 013321 329 YHPYTIKDLDKR 340 (445)
Q Consensus 329 ~~~~~~~~~~~~ 340 (445)
|||-. +||+..
T Consensus 32 ~~~~~-~~~~~~ 42 (727)
T 4b8c_D 32 LHPHL-DDPSLL 42 (727)
T ss_dssp TSGGG-TSCCCT
T ss_pred ccCCC-CCchhc
Confidence 55544 455554
No 303
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=26.74 E-value=4.2e+02 Score=25.19 Aligned_cols=19 Identities=11% Similarity=0.260 Sum_probs=11.4
Q ss_pred CCCEEEEeCCCCEEEEEcC
Q 013321 91 RGNIYIADTMNMAIRKISD 109 (445)
Q Consensus 91 dG~LYVAD~~N~rIrkfd~ 109 (445)
+++++++-..++.|+.+|.
T Consensus 328 ~~~~l~~~~~dg~i~vwd~ 346 (445)
T 2ovr_B 328 KDNILVSGNADSTVKIWDI 346 (445)
T ss_dssp ETTEEEEEETTSCEEEEET
T ss_pred eCCEEEEEeCCCeEEEEEC
Confidence 3455555555667777774
No 304
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=26.00 E-value=2.2e+02 Score=26.05 Aligned_cols=71 Identities=15% Similarity=0.147 Sum_probs=40.4
Q ss_pred ceEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCC--CCEEEEe
Q 013321 23 PFSVAVSP--SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR--GNIYIAD 98 (445)
Q Consensus 23 P~gIAVdp--dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~d--G~LYVAD 98 (445)
-.+|++.+ +|+++++-+.++.|..++...........+.+. -..-..|++.++ |.++++=
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h----------------~~~V~~v~~~p~~~g~~lasg 123 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGH----------------DSSVNSVCWAPHDYGLILACG 123 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCC----------------SSCCCEEEECCTTTCSCEEEE
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCC----------------CCceEEEEECCCCCCcEEEEE
Confidence 46777765 367777777777788777652100011111111 112357888876 6666665
Q ss_pred CCCCEEEEEcC
Q 013321 99 TMNMAIRKISD 109 (445)
Q Consensus 99 ~~N~rIrkfd~ 109 (445)
...+.|+.++.
T Consensus 124 s~D~~i~lwd~ 134 (316)
T 3bg1_A 124 SSDGAISLLTY 134 (316)
T ss_dssp CSSSCEEEEEE
T ss_pred cCCCCEEEEec
Confidence 55677777763
No 305
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=25.42 E-value=1.2e+02 Score=31.16 Aligned_cols=69 Identities=7% Similarity=0.061 Sum_probs=43.6
Q ss_pred eEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCc-cEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCC
Q 013321 24 FSVAVSPSGELLVLDSENSNIYKISTSLSPYSR-PKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM 102 (445)
Q Consensus 24 ~gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~-v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~ 102 (445)
..|+++|+|..+++-..++.|..++... +. +..+.|. ...-..|++.++|.++++=...+
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~---~~~~~~l~gH----------------~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRA---AFAVHPLVSR----------------ETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTC---TTCCEEEEEC----------------SSCEEEEECCSSCCBCEEEETTT
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcc---cccceeeecC----------------CCceEEEEeCCCCCeEEEEECCC
Confidence 5678888877777766667777776542 22 2233221 12345888888888776666677
Q ss_pred EEEEEcCCC
Q 013321 103 AIRKISDTG 111 (445)
Q Consensus 103 rIrkfd~dG 111 (445)
.|+..|..+
T Consensus 420 tv~lwd~~~ 428 (524)
T 2j04_B 420 SLIITNAAR 428 (524)
T ss_dssp EEECCBSCS
T ss_pred EEEEEechH
Confidence 788777543
No 306
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=24.50 E-value=4.6e+02 Score=24.86 Aligned_cols=69 Identities=16% Similarity=0.026 Sum_probs=39.6
Q ss_pred EEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCCEE
Q 013321 25 SVAVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAI 104 (445)
Q Consensus 25 gIAVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~rI 104 (445)
-|+.++++-|-|+ .++.|+.++... |++..+.... ++ -..-.+|++.++|.++++=...+.|
T Consensus 110 ~l~wS~~n~lAvg--ld~tV~lWd~~t---g~~~~~~~~~----~~---------~~~V~sv~fspdg~~lasgs~Dg~v 171 (420)
T 4gga_A 110 LVDWSSGNVLAVA--LDNSVYLWSASS---GDILQLLQME----QP---------GEYISSVAWIKEGNYLAVGTSSAEV 171 (420)
T ss_dssp CEEECTTSEEEEE--ETTEEEEEETTT---CCEEEEEECC----ST---------TCCEEEEEECTTSSEEEEEETTSCE
T ss_pred eEEECCCCEEEEE--eCCEEEEEECCC---CCEEEEEEec----CC---------CCcEEEEEECCCCCEEEEEECCCeE
Confidence 3455554333333 256788787663 4444332210 00 1123589999999977766667889
Q ss_pred EEEcCCC
Q 013321 105 RKISDTG 111 (445)
Q Consensus 105 rkfd~dG 111 (445)
+..|...
T Consensus 172 ~iWd~~~ 178 (420)
T 4gga_A 172 QLWDVQQ 178 (420)
T ss_dssp EEEETTT
T ss_pred EEEEcCC
Confidence 9888543
No 307
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=24.47 E-value=6.5e+02 Score=26.65 Aligned_cols=77 Identities=14% Similarity=0.286 Sum_probs=49.3
Q ss_pred CCceEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccC----------CCCCc--------c-CccC
Q 013321 21 MEPFSVAVSP-SGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGH----------VDGRP--------R-GARM 80 (445)
Q Consensus 21 ~~P~gIAVdp-dG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~----------~dG~~--------~-~a~L 80 (445)
.+-++|..++ +++++|+-... .|++|+.+ |++..+.|...+..+. .+|.. + ...|
T Consensus 355 ~HiNsv~~d~~dd~~liSsR~~-~I~~Id~t----G~V~W~LGg~~~w~~d~~~~~l~Pvd~~G~~~~~~~~~~~~~~~F 429 (571)
T 3elq_A 355 AHVNSIAYDAKDDSIILSSRHQ-GVVKIGRD----KQVKWILAPSKGWEKPLASKLLKPVDANGKPITCNENGLCENSDF 429 (571)
T ss_dssp CCEEEEEEETTTTEEEEEETTT-EEEEEETT----SCEEEEESCSTTCCTTGGGGBCEEBCTTSCBCCBCTTSCBSSSSC
T ss_pred cEecceeEcCCCCEEEEECCcc-EEEEEcCC----CcEEEEECCCCCCchhhhhhccccccccCcccccccccccccCCC
Confidence 4557788877 55677777666 99999874 7888888876442110 01211 1 1234
Q ss_pred CC---cceEEEcCCCCEEEEeCCCC
Q 013321 81 NH---PKGLAVDDRGNIYIADTMNM 102 (445)
Q Consensus 81 n~---P~GIavD~dG~LYVAD~~N~ 102 (445)
.. -+...+.++|+|.|-|-++.
T Consensus 430 ~~~~gQH~a~~~~~g~i~vFDNg~~ 454 (571)
T 3elq_A 430 DFTYTQHTAWISSKGTLTIFDNGDG 454 (571)
T ss_dssp CCCSSCEEEEECTTSCEEEEECCTT
T ss_pred ccccCCcCeEEcCCCeEEEEeCCCC
Confidence 33 46677778899999998754
No 308
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=24.43 E-value=2.8e+02 Score=22.29 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=14.0
Q ss_pred ceEEEcCCCCEEEEeCCC
Q 013321 84 KGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 84 ~GIavD~dG~LYVAD~~N 101 (445)
.-+.+..+|+|++.|..+
T Consensus 56 ~~l~l~~dGNLvl~d~~~ 73 (110)
T 3r0e_B 56 CFLRLNHKGELIIKDDDF 73 (110)
T ss_dssp CEEEECTTSCEEEECTTC
T ss_pred EEEEEeCCCcEEEEeCCC
Confidence 457788899999988643
No 309
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=24.30 E-value=2.7e+02 Score=22.22 Aligned_cols=18 Identities=33% Similarity=0.492 Sum_probs=13.3
Q ss_pred ceEEEcCCCCEEEEeCCC
Q 013321 84 KGLAVDDRGNIYIADTMN 101 (445)
Q Consensus 84 ~GIavD~dG~LYVAD~~N 101 (445)
.-+.+..+|+|.+.|..+
T Consensus 53 ~~l~l~~dGNLVl~~~~~ 70 (110)
T 3a0c_A 53 CRLTLHNNGNLVIYDQSN 70 (110)
T ss_dssp CEEEECTTSCEEEECTTC
T ss_pred EEEEEeCCCCEEEECCCC
Confidence 356777899998887643
No 310
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=24.26 E-value=6.3e+02 Score=26.43 Aligned_cols=75 Identities=15% Similarity=0.132 Sum_probs=40.5
Q ss_pred CCcEEEEeCCCCeEEEEeC-CCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEc-CCCC----EEEEeCCCCEE
Q 013321 31 SGELLVLDSENSNIYKIST-SLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD-DRGN----IYIADTMNMAI 104 (445)
Q Consensus 31 dG~LYVaDs~n~rI~kid~-dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD-~dG~----LYVAD~~N~rI 104 (445)
+|.|||+...++.|+.++. .. |+..--....... .. . ...+.-....++++. .+|. |||... .++|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~t---G~~lW~~~~~~~~-~~-~--~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-dg~l 133 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDP---GTILWQDKPKQNP-AA-R--AVACCDLVNRGLAYWPGDGKTPALILKTQL-DGNV 133 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCT---TSEEEEECCCCCG-GG-G--GGCSSCSCCCCCEEECCCSSSCCEEEEECT-TSEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCC---CcEEEEECCCCCc-cc-c--ccccccccccceEEEecCCcceeEEEEEcC-CCEE
Confidence 5789998764678999998 42 5544333221000 00 0 000000012367773 2566 888864 5789
Q ss_pred EEEcC-CCcE
Q 013321 105 RKISD-TGVT 113 (445)
Q Consensus 105 rkfd~-dGv~ 113 (445)
..+|. +|..
T Consensus 134 ~AlDa~TG~~ 143 (599)
T 1w6s_A 134 AALNAETGET 143 (599)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCCE
Confidence 99994 6743
No 311
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=23.63 E-value=2e+02 Score=30.34 Aligned_cols=27 Identities=15% Similarity=0.320 Sum_probs=15.7
Q ss_pred eEEEEcCCCcEEEEeCCC---------CeEEEEeCC
Q 013321 24 FSVAVSPSGELLVLDSEN---------SNIYKISTS 50 (445)
Q Consensus 24 ~gIAVdpdG~LYVaDs~n---------~rI~kid~d 50 (445)
.+++++|||...+..+.. +.++.++..
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~ 100 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN 100 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECC
Confidence 457889988843332221 456667765
No 312
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=22.67 E-value=5e+02 Score=24.64 Aligned_cols=24 Identities=17% Similarity=0.221 Sum_probs=18.3
Q ss_pred EEcCCCcEEEEeCCCCeEEEEeCC
Q 013321 27 AVSPSGELLVLDSENSNIYKISTS 50 (445)
Q Consensus 27 AVdpdG~LYVaDs~n~rI~kid~d 50 (445)
++..+|+++++-..++.|..++..
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~ 147 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAV 147 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETT
T ss_pred EEEEcCCEEEEEECCCcEEEEECC
Confidence 344567888887788899999876
No 313
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=22.38 E-value=5.8e+02 Score=25.30 Aligned_cols=22 Identities=14% Similarity=0.010 Sum_probs=16.1
Q ss_pred EECCCCeEEEEECCCCeEEEEE
Q 013321 144 YVGSSCSLLVIDRGNQAIREIQ 165 (445)
Q Consensus 144 ~vd~dG~LyVaD~gn~rIr~i~ 165 (445)
...++|.++++-...+.|+..+
T Consensus 333 afSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 333 KWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp EECSSSSEEEEECTTSCEEEEE
T ss_pred EECCCCCEEEEEECCCcEEEec
Confidence 3577888877777777777765
No 314
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=21.37 E-value=3.1e+02 Score=21.80 Aligned_cols=15 Identities=27% Similarity=0.364 Sum_probs=12.3
Q ss_pred ceEEEcCCCCEEEEe
Q 013321 84 KGLAVDDRGNIYIAD 98 (445)
Q Consensus 84 ~GIavD~dG~LYVAD 98 (445)
.-+.+..+|+|.+.|
T Consensus 52 ~~l~l~~~GNLvl~d 66 (112)
T 1xd5_A 52 CVLKMQNDGNLVIYS 66 (112)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEEeCCCCEEEEc
Confidence 457788899999988
No 315
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=20.05 E-value=5.6e+02 Score=24.26 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=36.2
Q ss_pred EEcCCCcEEEEeCCCCeEEEEeCCCCCCCccEEEecCCCCcccCCCCCccCccCCCcceEEEcCCCCEEEEeCCCCEEEE
Q 013321 27 AVSPSGELLVLDSENSNIYKISTSLSPYSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRK 106 (445)
Q Consensus 27 AVdpdG~LYVaDs~n~rI~kid~dg~~~G~v~~vaG~~~G~~G~~dG~~~~a~Ln~P~GIavD~dG~LYVAD~~N~rIrk 106 (445)
++..+|.++++-..++.|..++... ++....... + .+ .-..|++ +++++++=..++.|+.
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~---~~~~~~~~~------h-~~--------~v~~l~~--~~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNT---LECKRILTG------H-TG--------SVLCLQY--DERVIITGSSDSTVRV 197 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSS---CCEEEEECC------C-SS--------CEEEEEC--CSSEEEEEETTSCEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCC---CeEEEEEcC------C-CC--------cEEEEEE--CCCEEEEEcCCCeEEE
Confidence 4555788888888888999998763 333322211 1 01 1234444 4555555455677777
Q ss_pred EcC
Q 013321 107 ISD 109 (445)
Q Consensus 107 fd~ 109 (445)
+|.
T Consensus 198 wd~ 200 (435)
T 1p22_A 198 WDV 200 (435)
T ss_dssp EES
T ss_pred EEC
Confidence 774
Done!