Query 013322
Match_columns 445
No_of_seqs 325 out of 989
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 08:24:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013322.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013322hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vk9_A Alpha-toxin; glycosyltr 98.7 7.2E-08 2.5E-12 101.5 11.5 40 161-202 96-135 (551)
2 2bvl_A Toxin B; glycosyltransf 98.4 1.1E-06 3.7E-11 92.6 10.2 40 161-202 94-133 (543)
3 4dmv_A Toxin A, TCDA; transfer 98.1 7.8E-06 2.7E-10 85.6 9.8 39 162-202 109-147 (556)
4 3tzt_A Glycosyl transferase fa 91.5 0.46 1.6E-05 45.8 8.0 166 175-368 15-210 (276)
5 3u2u_A Glycogenin-1, GN-1, GN1 91.5 0.7 2.4E-05 44.6 9.2 56 275-333 99-156 (263)
6 1g9r_A Glycosyl transferase; a 88.6 0.93 3.2E-05 44.2 7.6 137 179-333 14-179 (311)
7 1ll2_A Glycogenin-1; protein-s 87.3 0.63 2.1E-05 46.3 5.4 129 180-333 19-155 (333)
8 3jsz_A LGT1, putative uncharac 84.4 1.1 3.9E-05 45.4 5.5 112 166-285 136-252 (525)
9 3zxw_B Ribulose bisphosphate c 17.3 2.1E+02 0.0072 24.2 5.5 43 157-199 44-88 (118)
10 1rbl_M Ribulose 1,5 bisphospha 12.8 3.2E+02 0.011 22.7 5.4 40 160-199 48-89 (109)
No 1
>2vk9_A Alpha-toxin; glycosyltransferase; 2.85A {Clostridium novyi} SCOP: c.68.1.22
Probab=98.68 E-value=7.2e-08 Score=101.54 Aligned_cols=40 Identities=5% Similarity=0.101 Sum_probs=36.3
Q ss_pred cccceeeeeccCCCCchhHHHHHHHHHHHHCCCCEEEEEeCC
Q 013322 161 CKIKFFMTWISSLESFGGREFLALESLYKSHPNACLVMVSNS 202 (445)
Q Consensus 161 c~~~~~m~W~s~~~~l~~Rq~caIESaar~nP~~~V~ils~t 202 (445)
-+..+-.||.+|. .|..+..+|+||.+++||+++.+|.++
T Consensus 96 IPKiIHyiW~Gg~--~P~~~~~cI~sWkk~~PDYei~lW~D~ 135 (551)
T 2vk9_A 96 ASKNLSFIWIGGP--ISDQSLEYYNMWKMFNKDYNIRLFYDK 135 (551)
T ss_dssp CCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred CCcceEEEEcCCC--CCHHHHHHHHHHHHHCcCCEEEEEecc
Confidence 4678889999997 799999999999999999999999875
No 2
>2bvl_A Toxin B; glycosyltransferase; HET: GLC UDP TBR; 2.2A {Clostridium difficile} SCOP: c.68.1.22 PDB: 2bvm_A* 2vkh_A* 2vkd_A* 2vl8_A*
Probab=98.36 E-value=1.1e-06 Score=92.58 Aligned_cols=40 Identities=8% Similarity=0.186 Sum_probs=36.2
Q ss_pred cccceeeeeccCCCCchhHHHHHHHHHHHHCCCCEEEEEeCC
Q 013322 161 CKIKFFMTWISSLESFGGREFLALESLYKSHPNACLVMVSNS 202 (445)
Q Consensus 161 c~~~~~m~W~s~~~~l~~Rq~caIESaar~nP~~~V~ils~t 202 (445)
=+..+-.||.++. .|..+..+|+||.+++||+++.+|.+.
T Consensus 94 IPKiIHyiW~Gg~--~P~~~~~cI~sWkk~~PDYei~lW~D~ 133 (543)
T 2bvl_A 94 VEKNLHFVWIGGQ--INDTAINYINQWKDVNSDYNVNVFYDS 133 (543)
T ss_dssp CCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred CCCceEEEEeCCC--CCHHHHHHHHHHHHHCcCCEEEEEecc
Confidence 3678889999997 799999999999999999999999875
No 3
>4dmv_A Toxin A, TCDA; transferase; 1.50A {Clostridium difficile} PDB: 4dmw_A* 3ss1_A 3srz_A
Probab=98.10 E-value=7.8e-06 Score=85.63 Aligned_cols=39 Identities=8% Similarity=0.147 Sum_probs=35.5
Q ss_pred ccceeeeeccCCCCchhHHHHHHHHHHHHCCCCEEEEEeCC
Q 013322 162 KIKFFMTWISSLESFGGREFLALESLYKSHPNACLVMVSNS 202 (445)
Q Consensus 162 ~~~~~m~W~s~~~~l~~Rq~caIESaar~nP~~~V~ils~t 202 (445)
+-.+-.||.++. .|..+..+|+||.+.+||+++.+|.+.
T Consensus 109 PKiIHy~W~Gg~--~P~~~~kcI~sWkk~~PDYeI~lW~Ds 147 (556)
T 4dmv_A 109 EKNLHFVWIGGE--VSDIALEYIKQWADINAEYNIKLWYDS 147 (556)
T ss_dssp CSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred CCceEEEecCCC--CCHHHHHHHHHHHHHCCCCeEEEEeCc
Confidence 677888999985 799999999999999999999999875
No 4
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=91.50 E-value=0.46 Score=45.84 Aligned_cols=166 Identities=13% Similarity=0.156 Sum_probs=83.7
Q ss_pred CchhHHHHHHHHHHHHCCC--CEEEEEeCCCCCCcchhhHHhhhhc-CcceEEeCCChhhhhhcCcHHHHHHHhhcCCcC
Q 013322 175 SFGGREFLALESLYKSHPN--ACLVMVSNSLDSRKGRLIFKQFLDN-GFKVIAVKPDYDYIFKNTYAQEWFNRLKKGNVD 251 (445)
Q Consensus 175 ~l~~Rq~caIESaar~nP~--~~V~ils~t~~~~~g~~~l~~ll~~-~~nv~v~~pdl~~lf~~TPl~~W~~~~~~g~~~ 251 (445)
.+-.--..++-|+.+++++ ..+.|++++... .....++.+.+. +.++..+.++-+ .|++-|.
T Consensus 15 ~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~-~~~~~L~~~~~~~~~~i~~~~~~~~-~~~~~~~------------- 79 (276)
T 3tzt_A 15 NYIPQMKVLMTSIYINNPGRIFDVYLIHSRISE-DKLKDLGEDLKKFSYTLYPIRATDD-LFSFAKV------------- 79 (276)
T ss_dssp GGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCH-HHHHHHHHHHHTTTCEEEEEECC-----------------------
T ss_pred hHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCH-HHHHHHHHHHHHcCCEEEEEEeCHH-HHhcCcc-------------
Confidence 3444566789999999995 455667765432 222345555443 456666655432 1221110
Q ss_pred CCCccchhhhHhHHHHHHHHH----cC-cEEEeCCceecccchhhhh------hhcccccccCC------------CCcc
Q 013322 252 PGLISLGQNLSNLLRLTLLYK----FG-GIYLDTDVIVLKNLSKLRN------TIGAQTVDSET------------KNWT 308 (445)
Q Consensus 252 ~~~i~~~a~~SD~lR~~lLyk----yG-GIYLD~Dvi~lkpld~l~n------~ig~e~~~~~~------------~~~~ 308 (445)
..++ ..+-+.|+.+-.- ++ =+|||+|+++++++++|.+ .+|+-.+.... ....
T Consensus 80 ~~~~----s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~ 155 (276)
T 3tzt_A 80 TDRY----PKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTD 155 (276)
T ss_dssp --------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------
T ss_pred cccc----CHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCC
Confidence 1111 2456778876543 33 4999999999999998754 23322110000 0014
Q ss_pred cccceEEEecCC----CHHHHHHHHHHHHhcCCCCcCccCcHHHHHHHHHHhCCCCCceeeCCC
Q 013322 309 RLNNAVLIFDKN----HPLLHKFIQEFTLTFDGNKWGHNGPYLVSRVVARVNGRPGFNFTVLPP 368 (445)
Q Consensus 309 ~l~Navm~a~~~----hpfl~~~L~~~~~~yd~~~w~~tGP~llTrvl~~~~~~~~~~i~VlP~ 368 (445)
.+|.|||..... ..+..++++.+...-....++. -+++..+++. .+..+|.
T Consensus 156 yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~~~~~~D--Qd~LN~~f~~-------~~~~Lp~ 210 (276)
T 3tzt_A 156 YYNSGLLLINLKRAREEIDPDEIFSFVEDNHMNLLLPD--QDILNAMYGD-------RIYPLDD 210 (276)
T ss_dssp CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHGG-------GEEEEEH
T ss_pred eEEeeEEEEEHHHHHhhhHHHHHHHHHHhccccccCCC--hhHHHHHHhC-------CEEECCc
Confidence 689999998754 2344455554443211112222 2456666542 3566665
No 5
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=91.47 E-value=0.7 Score=44.64 Aligned_cols=56 Identities=16% Similarity=0.302 Sum_probs=42.1
Q ss_pred cEEEeCCceecccchhhhhh--hcccccccCCCCcccccceEEEecCCCHHHHHHHHHHHH
Q 013322 275 GIYLDTDVIVLKNLSKLRNT--IGAQTVDSETKNWTRLNNAVLIFDKNHPLLHKFIQEFTL 333 (445)
Q Consensus 275 GIYLD~Dvi~lkpld~l~n~--ig~e~~~~~~~~~~~l~Navm~a~~~hpfl~~~L~~~~~ 333 (445)
=+|||+|++++++++++.+. +++..+ .+-...+|.|||...+......++++.+..
T Consensus 99 vlylD~D~~v~~~~~~Lf~~~~~aA~~d---~~~~~~fNsGv~li~p~~~~~~~l~~~~~~ 156 (263)
T 3u2u_A 99 CVFMDADTLVLANIDDLFDREELSAAPD---PGWPDCFNSGVFVYQPSVETYNQLLHLASE 156 (263)
T ss_dssp EEEECTTEEECSCCGGGGGSCSSEEEEC---TTSTTSEEEEEEEECCCHHHHHHHHHHHHH
T ss_pred EEEEcCCEeeccCHHHHhCCCcceEecc---CCCCccccCeEEEEcccHHHHHHHHHHHHh
Confidence 59999999999999998652 232221 111146899999999998888888888764
No 6
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=88.65 E-value=0.93 Score=44.18 Aligned_cols=137 Identities=18% Similarity=0.184 Sum_probs=72.6
Q ss_pred HHHHHHHHH-HHHCC-CCEEEEEeCCCCCCcchhhHHhhhhc-CcceEEeCCChhhhhhcCcHHHHHHHhhcCCcCCCCc
Q 013322 179 REFLALESL-YKSHP-NACLVMVSNSLDSRKGRLIFKQFLDN-GFKVIAVKPDYDYIFKNTYAQEWFNRLKKGNVDPGLI 255 (445)
Q Consensus 179 Rq~caIESa-ar~nP-~~~V~ils~t~~~~~g~~~l~~ll~~-~~nv~v~~pdl~~lf~~TPl~~W~~~~~~g~~~~~~i 255 (445)
--..++-|+ .++++ +..++|++++... .....++.+.+. +..|..+.++.+. +.+-|. ..+.+
T Consensus 14 ~~~vli~Sl~l~~~~~~~~f~il~~~ls~-~~~~~L~~~~~~~~~~i~~~~~~~~~-~~~~~~------------~~~~~ 79 (311)
T 1g9r_A 14 YLCVAAKSVEAAHPDTEIRFHVLDAGISE-ANRAAVAANLRGGGGNIRFIDVNPED-FAGFPL------------NIRHI 79 (311)
T ss_dssp HHHHHHHHHHHTCTTSCCEEEEEESSCCH-HHHHHHHHHSGGGTTTEEEEECCGGG-GTTSCC------------CCTTC
T ss_pred HHHHHHHHHHHHcCCCCceEEEEECCCCH-HHHHHHHHHHHHcCCEEEEEEcCHHH-HhcCcc------------ccccC
Confidence 445688899 55443 3456677765422 222345555443 5677777665432 222111 00111
Q ss_pred cchhhhHhHHHHHHHHHcC----cEEEeCCceecccchhhhhh------hcccccc-c----------C-CCCcccccce
Q 013322 256 SLGQNLSNLLRLTLLYKFG----GIYLDTDVIVLKNLSKLRNT------IGAQTVD-S----------E-TKNWTRLNNA 313 (445)
Q Consensus 256 ~~~a~~SD~lR~~lLykyG----GIYLD~Dvi~lkpld~l~n~------ig~e~~~-~----------~-~~~~~~l~Na 313 (445)
..+-+.|+.+-.-.+ =||||+|+++++++++|.+. +|+-.+. . + ......+|.|
T Consensus 80 ----s~~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~yfNsG 155 (311)
T 1g9r_A 80 ----SITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNAG 155 (311)
T ss_dssp ----CGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEEE
T ss_pred ----CHHHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCceEeee
Confidence 123344554433222 39999999999999998642 2321110 0 0 0112478999
Q ss_pred EEEecCC----CHHHHHHHHHHHH
Q 013322 314 VLIFDKN----HPLLHKFIQEFTL 333 (445)
Q Consensus 314 vm~a~~~----hpfl~~~L~~~~~ 333 (445)
||...+. ..+..++++.+..
T Consensus 156 v~linl~~~r~~~~~~~~~~~~~~ 179 (311)
T 1g9r_A 156 VLLINLKKWRRHDIFKMSSEWVEQ 179 (311)
T ss_dssp EEEECHHHHTTSCHHHHHHHHHHH
T ss_pred eeeeeHHHHHhcchHHHHHHHHHh
Confidence 9998753 3455666666554
No 7
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=87.26 E-value=0.63 Score=46.30 Aligned_cols=129 Identities=18% Similarity=0.258 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHCCCCEEEEEe-CCCCCCcchhhHHhhhhcCcceEEeCCChhhhhhcCcH-HHHHHHhhcCCcCCCCccc
Q 013322 180 EFLALESLYKSHPNACLVMVS-NSLDSRKGRLIFKQFLDNGFKVIAVKPDYDYIFKNTYA-QEWFNRLKKGNVDPGLISL 257 (445)
Q Consensus 180 q~caIESaar~nP~~~V~ils-~t~~~~~g~~~l~~ll~~~~nv~v~~pdl~~lf~~TPl-~~W~~~~~~g~~~~~~i~~ 257 (445)
-..++.|+.+++++..++++. ++.. ....+.|.+.+..+..+.+. +. ..+. ..++.+ +
T Consensus 19 a~vl~~SL~~~~s~~~l~vlv~~~is----~~~~~~L~~~~~~v~~v~~l-~~---~~~~~~~~~~~-------~----- 78 (333)
T 1ll2_A 19 ALVLGSSLKQHRTSRRLAVLTTPQVS----DTMRKALEIVFDEVITVDIL-DS---GDSAHLTLMKR-------P----- 78 (333)
T ss_dssp HHHHHHHHHHTTCCSEEEEEECTTSC----HHHHHHHHHHCSEEEECCTT-ST---TSTTHHHHHHC-------G-----
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCCCC----HHHHHHHHHhCCEEEEEeec-CC---cchhhcccccc-------c-----
Confidence 345689999999999876654 3321 11233333334555554331 00 0010 011110 0
Q ss_pred hhhhHhHHHHHHHH--HcC-cEEEeCCceecccchhhhhh--hcccccccCCCCc-ccccceEEEecCCCHHHHHHHHHH
Q 013322 258 GQNLSNLLRLTLLY--KFG-GIYLDTDVIVLKNLSKLRNT--IGAQTVDSETKNW-TRLNNAVLIFDKNHPLLHKFIQEF 331 (445)
Q Consensus 258 ~a~~SD~lR~~lLy--kyG-GIYLD~Dvi~lkpld~l~n~--ig~e~~~~~~~~~-~~l~Navm~a~~~hpfl~~~L~~~ 331 (445)
....-+.|+.+.. .|. =+|||+|+++++++++|.+. +++-.. ..| ..+|.|||...+......++++.+
T Consensus 79 -~~~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~~~aAv~d----~~~~~~fNsGvmlin~~~~~~~~l~~~~ 153 (333)
T 1ll2_A 79 -ELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPD----PGWPDCFNSGVFVYQPSVETYNQLLHVA 153 (333)
T ss_dssp -GGHHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEEC----SSSTTSEEEEEEEECCCHHHHHHHHHHH
T ss_pred -chHHHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCCceeEEec----CCCCcceeeeEEEEeCCHHHHHHHHHHH
Confidence 0112344444332 222 39999999999999998652 332211 112 479999999999888888888776
Q ss_pred HH
Q 013322 332 TL 333 (445)
Q Consensus 332 ~~ 333 (445)
..
T Consensus 154 ~~ 155 (333)
T 1ll2_A 154 SE 155 (333)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 8
>3jsz_A LGT1, putative uncharacterized protein; glucosyltransferase, legionnaire'S disease, legionella pneum transferase; HET: MSE UPG; 1.70A {Legionella pneumophila} PDB: 2wzg_A* 3jt1_A* 2wzf_A*
Probab=84.45 E-value=1.1 Score=45.43 Aligned_cols=112 Identities=21% Similarity=0.247 Sum_probs=70.2
Q ss_pred eeeeccCCC--CchhHHHHHHHHHHHHCCCCEEEEE-eCCCCCCcchhhHHhhhhcCcceEEeCCChhhhhhcCcHHHHH
Q 013322 166 FMTWISSLE--SFGGREFLALESLYKSHPNACLVMV-SNSLDSRKGRLIFKQFLDNGFKVIAVKPDYDYIFKNTYAQEWF 242 (445)
Q Consensus 166 ~m~W~s~~~--~l~~Rq~caIESaar~nP~~~V~il-s~t~~~~~g~~~l~~ll~~~~nv~v~~pdl~~lf~~TPl~~W~ 242 (445)
+-+|.|-.- ..+..++-.++-++.+||+.++.++ +.+.-..++..-++.|.++ .+|..+ |.+..=.+.++...+
T Consensus 136 ~~IWFSn~P~~fMp~e~q~~Lle~re~nPG~~i~LVYsStlLn~~a~~ql~~fake-n~Isll--Dids~k~e~~Lynl~ 212 (525)
T 3jsz_A 136 TSIWFSIKPELFMPSKQQEALKRRREQYPGCKIRLIYSSSLLNPEANRQMKAFAKK-QNISLI--DIDSVKTDSPLYPLI 212 (525)
T ss_dssp EEECCCSSTTCSSCHHHHHHHHHHHHHCTTCEEEEEECSTTSCHHHHHHHHHHHHH-TTEEEE--EGGGCCCCCTHHHHH
T ss_pred EEEEEeCChhHhccHHHHHHHHHHHhhCCCCeEEEEeehhhcCHHHHHHHHHHHHh-cCceEe--ehhhhcchHHHHHHH
Confidence 345777533 4677888888889999999776555 4443222233345555543 244444 666655777887777
Q ss_pred HH-hhcCCcCCCCccchhhhHhHHHHHH-HHHcCcEEEeCCceec
Q 013322 243 NR-LKKGNVDPGLISLGQNLSNLLRLTL-LYKFGGIYLDTDVIVL 285 (445)
Q Consensus 243 ~~-~~~g~~~~~~i~~~a~~SD~lR~~l-LykyGGIYLD~Dvi~l 285 (445)
+. +. ....|- ..|..||++|..- +|.+ |.|.|.|+=+-
T Consensus 213 k~EL~--nLg~GG--NpAaASDivRWlspv~~~-gtYtDfD~PvD 252 (525)
T 3jsz_A 213 KAELA--NLGMGG--NPAAASDLCRWIPELFNE-GFYVDIDLPVD 252 (525)
T ss_dssp HHHHH--TTTTTC--CHHHHHHHHTTCTTTCSS-EEEECTTCCBC
T ss_pred HHHHH--hccCCC--CHHHHHHHHHhhHHhccc-Cceeeeecccc
Confidence 54 21 123321 2489999999754 4555 99999998553
No 9
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=17.29 E-value=2.1e+02 Score=24.24 Aligned_cols=43 Identities=16% Similarity=0.326 Sum_probs=32.5
Q ss_pred cCCCcccceeeeeccCCCCch--hHHHHHHHHHHHHCCCCEEEEE
Q 013322 157 QNSSCKIKFFMTWISSLESFG--GREFLALESLYKSHPNACLVMV 199 (445)
Q Consensus 157 ~~~~c~~~~~m~W~s~~~~l~--~Rq~caIESaar~nP~~~V~il 199 (445)
+......+.|..|.-|.-..+ .-....||.+.+.||+.-|-++
T Consensus 44 d~~~~~~~yW~mWklPmf~~~d~~~Vl~Ele~C~k~~p~~yVRli 88 (118)
T 3zxw_B 44 ETSNAEIRYWTMWKLPLFNCTNAQDVLNEVQQCRSEYPNCFIRVV 88 (118)
T ss_dssp SCCCTTCCCCEEESSCCTTCCCHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cCCCcccCEEeecccCCcCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 344456778999998865433 4466889999999999988766
No 10
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=12.81 E-value=3.2e+02 Score=22.74 Aligned_cols=40 Identities=5% Similarity=0.045 Sum_probs=30.3
Q ss_pred CcccceeeeeccCCCC--chhHHHHHHHHHHHHCCCCEEEEE
Q 013322 160 SCKIKFFMTWISSLES--FGGREFLALESLYKSHPNACLVMV 199 (445)
Q Consensus 160 ~c~~~~~m~W~s~~~~--l~~Rq~caIESaar~nP~~~V~il 199 (445)
....+.|..|.-|.-. =..-....||.+.+.||+.-|-++
T Consensus 48 ~~~~~yW~mwklPmf~~~d~~~Vl~Ele~C~k~~p~~yVRli 89 (109)
T 1rbl_M 48 NPEEFYWTMWKLPLFACAAPQQVLDEVRECRSEYGDCYIRVA 89 (109)
T ss_dssp CTTCCCCEECSSCCTTCCCHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cccccEEeecccCCcCCCCHHHHHHHHHHHHHHCCCCeEEEE
Confidence 3456779999877553 345667789999999999988776
Done!