Your job contains 1 sequence.
>013324
MTSSTVMNYDIENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRG
AAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGWAATQVAHMSM
VNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSI
FIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQ
AYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFC
GAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDK
MSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSL
VSVAVTFTMKLHTPYSKPLVEPLLQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013324
(445 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050626 - symbol:AT2G44280 "AT2G44280" species... 1157 2.1e-156 2
TAIR|locus:2101442 - symbol:AT3G60070 "AT3G60070" species... 1173 2.7e-156 2
WB|WBGene00017530 - symbol:F16H11.1 species:6239 "Caenorh... 354 2.8e-42 2
UNIPROTKB|Q6NUT3 - symbol:MFSD12 "Major facilitator super... 267 1.2e-41 3
MGI|MGI:3604804 - symbol:Mfsd12 "major facilitator superf... 252 6.5e-40 3
ZFIN|ZDB-GENE-030131-4642 - symbol:mfsd12a "major facilit... 237 7.7e-37 3
TIGR_CMR|CPS_3708 - symbol:CPS_3708 "sugar:cation symport... 91 0.00026 2
>TAIR|locus:2050626 [details] [associations]
symbol:AT2G44280 "AT2G44280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 InterPro:IPR016196 SUPFAM:SSF103473
EMBL:AY128290 EMBL:BT002653 IPI:IPI00545135 RefSeq:NP_001078055.1
RefSeq:NP_181957.2 UniGene:At.36778 ProteinModelPortal:Q8L7S2
IntAct:Q8L7S2 EnsemblPlants:AT2G44280.1 EnsemblPlants:AT2G44280.2
GeneID:819036 KEGG:ath:AT2G44280 TAIR:At2g44280
HOGENOM:HOG000239767 InParanoid:Q8L7S2 OMA:MELDSTI PhylomeDB:Q8L7S2
ProtClustDB:CLSN2693570 Genevestigator:Q8L7S2 Uniprot:Q8L7S2
Length = 462
Score = 1157 (412.3 bits), Expect = 2.1e-156, Sum P(2) = 2.1e-156
Identities = 219/335 (65%), Positives = 273/335 (81%)
Query: 110 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 169
WAATQV+HM+MVNCITLNSTSRV LTS RNAF+MVANL LYAIA +VF VS A T + E
Sbjct: 140 WAATQVSHMAMVNCITLNSTSRVALTSSRNAFSMVANLGLYAIALVVFGVSEAVTKENTE 199
Query: 170 NQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVY 229
+QYRWIAYSSI +GCCFV IFL T+EPRL++ LR S ARI W+YWF+KILYYQVA+VY
Sbjct: 200 SQYRWIAYSSITVGCCFVVIFLMGTKEPRLRINLRETSRARIPWSYWFRKILYYQVAMVY 259
Query: 230 MLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAY 289
+LTRLV+NVSQAYLAF+VI+DL+M QSAKAL+PAIIY+CSF+VS++LQE+ W G+RLKAY
Sbjct: 260 LLTRLVLNVSQAYLAFFVIDDLQMAQSAKALIPAIIYVCSFVVSVMLQEIPWNGKRLKAY 319
Query: 290 YSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCA 349
Y AGG++W+FCG IL+LP +++++MY +++F+GIANA+M+VT ISMQ+VL+G L GCA
Sbjct: 320 YCAGGIIWIFCGISILLLPRSINSYMYAISVFIGIANAVMLVTSISMQSVLIGSKLGGCA 379
Query: 350 FVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRF 409
FVCG+LSFLDKMSCG+A+YVLQS+Q SP V D N + Y SVTR+
Sbjct: 380 FVCGSLSFLDKMSCGLALYVLQSHQGTSPKV-DVN-------------IKEYFYFSVTRY 425
Query: 410 GLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEPLL 444
GLGL+PA+CSLV V VT+ M+L + KPL +PLL
Sbjct: 426 GLGLVPAVCSLVGVVVTYFMELDSTILKPLCQPLL 460
Score = 389 (142.0 bits), Expect = 2.1e-156, Sum P(2) = 2.1e-156
Identities = 72/93 (77%), Positives = 80/93 (86%)
Query: 1 MTSSTVMNYDIENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRG 60
MTSS ++ + E +D T+P+GR SV YYG GHMLNDITA+CWFTYLLLFLT IGLSPR
Sbjct: 1 MTSSVIVGMEEEEEDPSTKPLGRLSVFYYGVGHMLNDITASCWFTYLLLFLTQIGLSPRD 60
Query: 61 AAAVMLSGQIADGFATIFIGELIDRFGHFKIWH 93
AA VMLSGQ+ADGFATIFIGELIDRFGHFKIWH
Sbjct: 61 AAIVMLSGQVADGFATIFIGELIDRFGHFKIWH 93
>TAIR|locus:2101442 [details] [associations]
symbol:AT3G60070 "AT3G60070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0016020 "membrane" evidence=ISS]
EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR016196
SUPFAM:SSF103473 eggNOG:NOG263455 OMA:CARYGPR HOGENOM:HOG000239767
ProtClustDB:CLSN2693570 EMBL:AY123977 IPI:IPI00527851
RefSeq:NP_191566.5 UniGene:At.1176 ProteinModelPortal:Q8L7Z7
EnsemblPlants:AT3G60070.1 GeneID:825177 KEGG:ath:AT3G60070
TAIR:At3g60070 InParanoid:Q8L7Z7 PhylomeDB:Q8L7Z7
Genevestigator:Q8L7Z7 Uniprot:Q8L7Z7
Length = 458
Score = 1173 (418.0 bits), Expect = 2.7e-156, Sum P(2) = 2.7e-156
Identities = 229/339 (67%), Positives = 278/339 (82%)
Query: 110 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 169
WAATQV+HM+MVNCI+LNSTSRV LTS RNAFTMVANL LYAIA +VF V A + D E
Sbjct: 133 WAATQVSHMAMVNCISLNSTSRVALTSSRNAFTMVANLGLYAIALVVFGVIKAGSKEDTE 192
Query: 170 NQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVY 229
QYRWIAYSSI IGCCFV IFL T+EPRL++ L+ S ARI W YWF+KILYYQVA+VY
Sbjct: 193 TQYRWIAYSSITIGCCFVVIFLMGTKEPRLRIDLKETSRARIPWVYWFRKILYYQVAMVY 252
Query: 230 MLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAY 289
+LTRLV+NVSQAYLAF+VI+DL+M QSAKALVPAIIYICSF+VS+LLQE+ W G+RLKAY
Sbjct: 253 LLTRLVLNVSQAYLAFFVIDDLQMDQSAKALVPAIIYICSFVVSVLLQEIPWNGKRLKAY 312
Query: 290 YSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCA 349
Y+AGG++W+FCGA IL+LP ++S+FMY +++F+GIANALMMVT ISMQ+VLVG ++ GCA
Sbjct: 313 YTAGGIIWIFCGAAILLLPRDISSFMYAISVFIGIANALMMVTAISMQSVLVGAEVGGCA 372
Query: 350 FVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRF 409
FVCG+LSFLDKMSCG+A+YVLQS+Q+ SP L+NN + Y+SVTR+
Sbjct: 373 FVCGSLSFLDKMSCGLALYVLQSHQTTSPR-----------GQLNNNQ--QSVYLSVTRY 419
Query: 410 GLGLIPAICSLVSVAVTFTMKLHTP--YSKPLV-EPLLQ 445
GLGL+PA+CS V VAVTF M+L SKPL+ EPLL+
Sbjct: 420 GLGLVPALCSFVGVAVTFFMELEAAGSLSKPLLREPLLE 458
Score = 372 (136.0 bits), Expect = 2.7e-156, Sum P(2) = 2.7e-156
Identities = 66/80 (82%), Positives = 72/80 (90%)
Query: 14 DDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADG 73
+D FT+P+GRWSV +YG GHMLNDITA+CWFTYLLLFLT IGLSPR AA VMLSGQ+AD
Sbjct: 7 EDPFTKPIGRWSVFFYGVGHMLNDITASCWFTYLLLFLTQIGLSPRDAAIVMLSGQVADA 66
Query: 74 FATIFIGELIDRFGHFKIWH 93
FATIF GELIDRFGHFKIWH
Sbjct: 67 FATIFTGELIDRFGHFKIWH 86
>WB|WBGene00017530 [details] [associations]
symbol:F16H11.1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] InterPro:IPR016196
SUPFAM:SSF103473 EMBL:FO080880 eggNOG:COG2211 HOGENOM:HOG000006540
GeneTree:ENSGT00390000016464 PIR:T16084 RefSeq:NP_508799.1
ProteinModelPortal:Q19498 EnsemblMetazoa:F16H11.1 GeneID:180739
KEGG:cel:CELE_F16H11.1 UCSC:F16H11.1 CTD:180739 WormBase:F16H11.1
InParanoid:Q19498 OMA:HFYNDLC NextBio:910714 Uniprot:Q19498
Length = 501
Score = 354 (129.7 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 92/288 (31%), Positives = 157/288 (54%)
Query: 110 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY-AIAFIVFSVSTAKTHA-- 166
WA+ Q++H++++ ++ SR + S R AFT++ANLS+Y A+A+++ S ST T
Sbjct: 159 WASVQISHLALIPELSSVPASRATMNSLRYAFTVIANLSVYFALAWLL-SESTGHTSIGP 217
Query: 167 -DLENQYRWIAYSSIFIGCCFVGIFLSRTEEP-RLKMGLRGNSHA-------RISWAYWF 217
D + +R + + +G +F + T EP + R NS + R+ W WF
Sbjct: 218 WDFSH-FRLAGWLVVVLGITVAFVFYAFTREPTNYRRFSRLNSFSSDASELVRMHWTSWF 276
Query: 218 KKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQ 277
+ +YQ+AL+YML+RL +N+SQ Y FY+ + A++P + Y+ SF VS++
Sbjct: 277 GHVQFYQIALLYMLSRLYINISQVYFPFYITMTQNYEKKYVAILPMVAYLSSFSVSMVNS 336
Query: 278 EMAWTGQRLKAYYSAG---GVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGI 334
+ K YS G G+L C +L LP +Y LA+ +GIA A++++T +
Sbjct: 337 LPVVSKLSKKILYSFGLASGML--SCAVMMLDLP---GWKIYALAVGIGIAQAILLITSL 391
Query: 335 SMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ----SYQSMSP 378
S+ L+ ++ AFV G +SF DK+S GIA +++ +Y ++ P
Sbjct: 392 SITADLINKNTESGAFVYGAMSFFDKLSNGIAYQLIELWTPAYDALKP 439
Score = 110 (43.8 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 12 ENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQI 70
++D SFT+ + +G GH ND+ A+ WFTY ++++ + A +ML GQ+
Sbjct: 29 DHDISFTKKIA------FGIGHFYNDLCASMWFTYFMIYMEKVLKFQSSRAGMLMLIGQV 82
Query: 71 ADGFATIFIGELID 84
D +T +G D
Sbjct: 83 TDAISTPLVGIFSD 96
>UNIPROTKB|Q6NUT3 [details] [associations]
symbol:MFSD12 "Major facilitator superfamily
domain-containing protein 12" species:9606 "Homo sapiens"
[GO:0006810 "transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] GO:GO:0016021 GO:GO:0006810
InterPro:IPR016196 SUPFAM:SSF103473 EMBL:CH471139 PROSITE:PS50850
EMBL:BC036706 EMBL:BC068439 IPI:IPI00166640 IPI:IPI00783894
RefSeq:NP_001036145.1 RefSeq:NP_068377.2 RefSeq:NP_778148.2
UniGene:Hs.656901 ProteinModelPortal:Q6NUT3 DMDM:125991816
PaxDb:Q6NUT3 PRIDE:Q6NUT3 Ensembl:ENST00000355415 GeneID:126321
KEGG:hsa:126321 UCSC:uc002lxx.3 UCSC:uc002lxy.3 CTD:126321
GeneCards:GC19M003539 HGNC:HGNC:28299 neXtProt:NX_Q6NUT3
PharmGKB:PA134955537 eggNOG:NOG263455 HOGENOM:HOG000006540
HOVERGEN:HBG056517 PhylomeDB:Q6NUT3 ChiTaRS:MFSD12
GenomeRNAi:126321 NextBio:81773 ArrayExpress:Q6NUT3 Bgee:Q6NUT3
CleanEx:HS_C19orf28 Genevestigator:Q6NUT3 Uniprot:Q6NUT3
Length = 480
Score = 267 (99.0 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 59/180 (32%), Positives = 102/180 (56%)
Query: 195 EEPRLKMGLRGNSHAR--ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLR 252
EEP L + A+ + W +W ++ +YQV ++YM TRL+VN+SQ Y+A Y+ L
Sbjct: 248 EEPGEHTPLLAPATAQPLLLWKHWLREPAFYQVGILYMTTRLIVNLSQTYMAMYLTYSLH 307
Query: 253 MGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMS 312
+ + A +P ++Y+ F+ S L++ + R Y+S G+L + A + L +
Sbjct: 308 LPKKFIATIPLVMYLSGFLSSFLMKPINKCIGRNMTYFS--GLLVILAFAAWVALAEGLG 365
Query: 313 AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 372
+Y A+ +G A ++VT ++M L+G + AFV G++SFLDK++ G+AV +QS
Sbjct: 366 VAVYAAAVLLGAGCATILVTSLAMTADLIGPHTNSGAFVYGSMSFLDKVANGLAVMAIQS 425
Score = 157 (60.3 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 35/83 (42%), Positives = 47/83 (56%)
Query: 19 QPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATI 77
+P+ + L Y GH LND+ A+ WFTYLLL+L + S RGA ++L GQ+ADG T
Sbjct: 15 RPLSLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTP 74
Query: 78 FIGELIDR-------FGHFKIWH 93
+G DR +G K WH
Sbjct: 75 LVGYEADRAASCCARYGPRKAWH 97
Score = 112 (44.5 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 19/47 (40%), Positives = 35/47 (74%)
Query: 110 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 156
WA+TQ++H+S++ + N +V LT+ R AFT+VAN+++Y A+++
Sbjct: 142 WASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLL 188
>MGI|MGI:3604804 [details] [associations]
symbol:Mfsd12 "major facilitator superfamily domain
containing 12" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] MGI:MGI:3604804 GO:GO:0016021
GO:GO:0006810 InterPro:IPR016196 SUPFAM:SSF103473 PROSITE:PS50850
CTD:126321 eggNOG:NOG263455 HOGENOM:HOG000006540 HOVERGEN:HBG056517
EMBL:AK149678 EMBL:AK154386 EMBL:AK154902 EMBL:AK171084
EMBL:BC118620 EMBL:BC119790 IPI:IPI00654076 RefSeq:NP_082933.2
UniGene:Mm.182281 ProteinModelPortal:Q3U481 PRIDE:Q3U481
DNASU:73822 Ensembl:ENSMUST00000044844 GeneID:73822 KEGG:mmu:73822
UCSC:uc007gho.1 GeneTree:ENSGT00390000016464 InParanoid:Q3U481
OMA:CARYGPR OrthoDB:EOG4W3SN4 NextBio:339129 Bgee:Q3U481
CleanEx:MM_F630110N24RIK Genevestigator:Q3U481 Uniprot:Q3U481
Length = 476
Score = 252 (93.8 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 53/160 (33%), Positives = 91/160 (56%)
Query: 213 WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIV 272
W +W ++ +YQV ++YM TRL+VN+SQ Y+A Y+ L + + A +P ++Y+ F
Sbjct: 264 WKHWLREPAFYQVGMLYMTTRLIVNLSQTYIAMYLTYSLSLPKKFIATIPLVMYLSGFFS 323
Query: 273 SILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVT 332
S L++ + R Y++ G+L + A + L N+ +Y A+ +G A ++VT
Sbjct: 324 SFLMKPVNRRIGRNMTYFT--GLLVILAFAAWVALADNLGVAVYGAAVLLGAGCATILVT 381
Query: 333 GISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 372
++M L+G AFV G +SF DK++ G+AV +QS
Sbjct: 382 SLAMTADLIGPHTHSGAFVYGAMSFSDKVANGLAVMAVQS 421
Score = 158 (60.7 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 35/73 (47%), Positives = 42/73 (57%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR 85
L + GH LND+ A WFTYLLLFL + G S RGA ++L GQ+ADG T +G DR
Sbjct: 22 LSFAVGHFLNDLCAGMWFTYLLLFLHSVRGYSSRGAGLLLLLGQVADGLCTPLVGYEADR 81
Query: 86 F-----GHFKIWH 93
G K WH
Sbjct: 82 ASCVRCGPRKAWH 94
Score = 114 (45.2 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 110 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 167
WAATQ+AH+S++ + + +V LT+ R AFT+VAN+++Y A+++ + H +
Sbjct: 139 WAATQIAHLSLIPELVTSDHEKVELTALRYAFTVVANITVYGAAWLLLHLQ-GSAHGE 195
Score = 39 (18.8 bits), Expect = 6.5e-16, Sum P(3) = 6.5e-16
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 432 HTPYSKPLVEPLL 444
HTP P +PLL
Sbjct: 250 HTPLVAPAAQPLL 262
>ZFIN|ZDB-GENE-030131-4642 [details] [associations]
symbol:mfsd12a "major facilitator superfamily
domain containing 12a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] ZFIN:ZDB-GENE-030131-4642
InterPro:IPR016196 SUPFAM:SSF103473 eggNOG:COG2211
HOGENOM:HOG000006540 HOVERGEN:HBG056517 OrthoDB:EOG4W3SN4
EMBL:BC128826 IPI:IPI00481376 UniGene:Dr.80044 InParanoid:A1A5V3
ArrayExpress:A1A5V3 Uniprot:A1A5V3
Length = 507
Score = 237 (88.5 bits), Expect = 7.7e-37, Sum P(3) = 7.7e-37
Identities = 47/162 (29%), Positives = 95/162 (58%)
Query: 211 ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSF 270
+ W W + +YQVAL+YM TRL+VN+SQ Y++ Y+ L + ++ A +P ++++ F
Sbjct: 258 LHWNNWLTQPSFYQVALLYMSTRLIVNLSQTYISMYLTYTLLLPKNYIATIPLVMFLSGF 317
Query: 271 IVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMM 330
S +++ ++ + Y+ G+L + + ++L +M +Y A+ +G+ +A ++
Sbjct: 318 ASSFIMKPVSKLIGKCMTYFL--GLLLILAFSYWVLLDTHMGDKVYGAAVLLGVGSATIL 375
Query: 331 VTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 372
V ++M L+G+ AFV G +SF DK++ G+ V ++Q+
Sbjct: 376 VMSLAMTAELIGDQTHSGAFVYGAMSFTDKVANGLGVMIIQT 417
Score = 141 (54.7 bits), Expect = 7.7e-37, Sum P(3) = 7.7e-37
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR 85
L Y GH LND+ A+ WFTYLL+F + G A ++L GQIADG T IG DR
Sbjct: 15 LSYSVGHFLNDLCASMWFTYLLVFYHSVLGFENTYAGVLLLVGQIADGVCTPLIGYESDR 74
Query: 86 ------FGHFKIWH 93
+G K WH
Sbjct: 75 TPGCGSYGKRKTWH 88
Score = 123 (48.4 bits), Expect = 7.7e-37, Sum P(3) = 7.7e-37
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 110 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 169
WAATQ++H+S++ + +V LT+ R AFT++AN+++YA+A+++F A ++
Sbjct: 133 WAATQISHLSLIPELVSCEHEKVELTAYRYAFTVIANITVYAVAWLLFHFQEGDDPAVMD 192
Query: 170 NQ-------YRWIAYSSIFIGCCFVGIFLSRTEE 196
N +R ++ + IG F +F T E
Sbjct: 193 NLGSVDIPVFRNLSLIVVGIGAVFTFLFHLGTRE 226
>TIGR_CMR|CPS_3708 [details] [associations]
symbol:CPS_3708 "sugar:cation symporter family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0005402
"cation:sugar symporter activity" evidence=ISS] [GO:0008643
"carbohydrate transport" evidence=ISS] InterPro:IPR001927
GO:GO:0016020 GO:GO:0005215 InterPro:IPR016196 SUPFAM:SSF103473
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006814
eggNOG:COG2211 TIGRFAMs:TIGR00792 HOGENOM:HOG000222022
ProtClustDB:CLSK938263 RefSeq:YP_270375.1 ProteinModelPortal:Q47XU5
STRING:Q47XU5 GeneID:3521262 KEGG:cps:CPS_3708 PATRIC:21470343
OMA:YQELADY BioCyc:CPSY167879:GI48-3730-MONOMER Uniprot:Q47XU5
Length = 442
Score = 91 (37.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 64/271 (23%), Positives = 120/271 (44%)
Query: 110 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 169
+ A + + + IT ++ RV + S R F M+ + + A A + +
Sbjct: 119 YTAINIPYCGLGGVITADAKERVTVQSYRFVFGMLGGV-IVAGATMPMVEWFGQGDTAKG 177
Query: 170 NQYRWIAYSSIFIGC---CFVGIFLSRTEEPRLK-MGLRGNSHARISWAYWFKKILYYQV 225
QY +A SS+ + CF+G R + P + ++ N + W +IL +
Sbjct: 178 YQYTMVAMSSLGVVLFLLCFLGT-KERVKPPENQDSSMKENLQSLWKNDQW--RILC--I 232
Query: 226 ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAII---YICSFIVSILLQEMAWT 282
A Y+LT V+ ++ LA Y + +G+ + L+ + + + S I + Q +A
Sbjct: 233 ASFYLLTGQVLRLT---LAVYYVKYF-LGR--EDLITSFLTLGVVASMIGCAVAQPLAKR 286
Query: 283 GQRLKAYYSAGGVLWVFCGAGILILPMNMS-AFMYVLA--IFVGIANALM---MVTGISM 336
++KAY + + V C A LI P + AF+ ++ F+ +A+ L+ M I
Sbjct: 287 VCKIKAYIALQSLSAVICLASFLISPNQIILAFVAFISWKFFLDMASPLLWAKMADTIDY 346
Query: 337 QNVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 367
+ G ++G + G + F+ KM GIA+
Sbjct: 347 GHKKTGIRVTGLVY-SGVIFFI-KM--GIAI 373
Score = 74 (31.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR 85
YG G ++I +LLLF TD+ GLSP + L ++ D +G L D+
Sbjct: 10 YGLGDTASNIIFQTVMMFLLLFYTDVVGLSPAVVGTMFLFVRLIDAVTDPIMGNLADK 67
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.137 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 445 429 0.00085 118 3 11 22 0.42 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 619 (66 KB)
Total size of DFA: 256 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.57u 0.23s 31.80t Elapsed: 00:00:01
Total cpu time: 31.57u 0.23s 31.80t Elapsed: 00:00:01
Start: Fri May 10 11:09:00 2013 End: Fri May 10 11:09:01 2013