BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013324
(445 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NUT3|MFS12_HUMAN Major facilitator superfamily domain-containing protein 12 OS=Homo
sapiens GN=MFSD12 PE=2 SV=2
Length = 480
Score = 182 bits (461), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 208/413 (50%), Gaps = 61/413 (14%)
Query: 19 QPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATI 77
+P+ + L Y GH LND+ A+ WFTYLLL+L + S RGA ++L GQ+ADG T
Sbjct: 15 RPLSLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTP 74
Query: 78 FIGELID-------RFGHFKIWHGAGSVLVAVSFSSV----------------------- 107
+G D R+G K WH G+V V +SF +
Sbjct: 75 LVGYEADRAASCCARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPF 134
Query: 108 -----FGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV--- 159
FGWA+TQ++H+S++ + N +V LT+ R AFT+VAN+++Y A+++ +
Sbjct: 135 IVIFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLLLHLQGS 194
Query: 160 STAKTHAD--LENQ--------YRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHA 209
S + D + +Q +R ++ + +G F +F T E R H
Sbjct: 195 SRVEPTQDISISDQLGGQDVPVFRNLSLLVVGVGAVFSLLFHLGTRERRRPHAEEPGEHT 254
Query: 210 R----------ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA 259
+ W +W ++ +YQV ++YM TRL+VN+SQ Y+A Y+ L + + A
Sbjct: 255 PLLAPATAQPLLLWKHWLREPAFYQVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKKFIA 314
Query: 260 LVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLA 319
+P ++Y+ F+ S L++ + R Y+S G+L + A + L + +Y A
Sbjct: 315 TIPLVMYLSGFLSSFLMKPINKCIGRNMTYFS--GLLVILAFAAWVALAEGLGVAVYAAA 372
Query: 320 IFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 372
+ +G A ++VT ++M L+G + AFV G++SFLDK++ G+AV +QS
Sbjct: 373 VLLGAGCATILVTSLAMTADLIGPHTNSGAFVYGSMSFLDKVANGLAVMAIQS 425
>sp|Q3U481|MFS12_MOUSE Major facilitator superfamily domain-containing protein 12 OS=Mus
musculus GN=Mfsd12 PE=2 SV=1
Length = 476
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 210/420 (50%), Gaps = 61/420 (14%)
Query: 12 ENDDSFTQPVGRWSV---LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLS 67
+DD+ P S+ L + GH LND+ A WFTYLLLFL + G S RGA ++L
Sbjct: 4 PSDDAGPGPPRTLSLAARLSFAVGHFLNDLCAGMWFTYLLLFLHSVRGYSSRGAGLLLLL 63
Query: 68 GQIADGFATIFIGELIDRF-----GHFKIWHGAGSVLVAVSFSSV--------------- 107
GQ+ADG T +G DR G K WH AG+V V +SF +
Sbjct: 64 GQVADGLCTPLVGYEADRASCVRCGPRKAWHLAGTVCVLLSFPFIFSPCLGCGEATPEWA 123
Query: 108 -------------FGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 154
FGWAATQ+AH+S++ + + +V LT+ R AFT+VAN+++Y A+
Sbjct: 124 ALLYYGPFIVVFQFGWAATQIAHLSLIPELVTSDHEKVELTALRYAFTVVANITVYGAAW 183
Query: 155 IVFSVS-TAKTHADLE--NQ--------YRWIAYSSIFIGCCFVGIFLSRTEEPRLKM-- 201
++ + +A D+ +Q +R +A + +G F +F T+E
Sbjct: 184 LLLHLQGSAHGEQDISVGDQLGVQDVPVFRNLALLVVGVGAIFSLLFHLGTKEGHRSQHW 243
Query: 202 GLRGNSHARIS---------WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLR 252
G N H + W +W ++ +YQV ++YM TRL+VN+SQ Y+A Y+ L
Sbjct: 244 GNEPNEHTPLVAPAAQPLLLWKHWLREPAFYQVGMLYMTTRLIVNLSQTYIAMYLTYSLS 303
Query: 253 MGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMS 312
+ + A +P ++Y+ F S L++ + R Y++ G+L + A + L N+
Sbjct: 304 LPKKFIATIPLVMYLSGFFSSFLMKPVNRRIGRNMTYFT--GLLVILAFAAWVALADNLG 361
Query: 313 AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 372
+Y A+ +G A ++VT ++M L+G AFV G +SF DK++ G+AV +QS
Sbjct: 362 VAVYGAAVLLGAGCATILVTSLAMTADLIGPHTHSGAFVYGAMSFSDKVANGLAVMAVQS 421
>sp|P94488|YNAJ_BACSU Uncharacterized symporter YnaJ OS=Bacillus subtilis (strain 168)
GN=ynaJ PE=3 SV=2
Length = 463
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID--- 84
Y SG ++ A TYLL F TD+ GLS A + L +I D A FIG ++D
Sbjct: 17 YASGDFACNLIYATVSTYLLFFYTDVFGLSAAAAGTMFLVVRIIDALADPFIGTIVDRTN 76
Query: 85 -RFGHFKIWHGAGS---VLVAV------SFSSV--------------FGWAATQVAHMSM 120
RFG F+ + G+ V++A+ FS + + V + ++
Sbjct: 77 SRFGRFRPYLLFGAFPFVILAILCFTTPDFSDMGKLIYAYITYVGLSLTYTTINVPYGAL 136
Query: 121 VNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSI 180
+ +T N+ V +TS R F ANL +AF V ++ + W I
Sbjct: 137 TSAMTRNNQEVVSITSVRMLF---ANLGGLVVAFFVPLLAAYLSDTSGNESLGWQLTMGI 193
Query: 181 F--IGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKK 219
IG C + IF ++ + R+ + S +I + F++
Sbjct: 194 LGMIGGCLL-IFCFKSTKERVTL---QKSEEKIKFTDIFEQ 230
>sp|P74168|Y1374_SYNY3 Uncharacterized symporter sll1374 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=sll1374 PE=3 SV=1
Length = 544
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR 85
L YG+G ITA YLL FLTD+ G+ A +V++ G+I D IG L DR
Sbjct: 16 LAYGAGDFGPAITANILVFYLLFFLTDVAGIPAALAGSVLMIGKIFDAINDPIIGLLSDR 75
>sp|O07366|MELB_ENTAE Melibiose carrier protein OS=Enterobacter aerogenes GN=melB PE=3
SV=1
Length = 471
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 56/148 (37%), Gaps = 28/148 (18%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID- 84
L YG G D + YL+ + TDI GLS + L +I D A +G +++
Sbjct: 9 LSYGFGAFGKDFAIGIVYMYLMYYYTDIVGLSVGVVGTLFLVARILDAIADPIMGWIVNC 68
Query: 85 ---RFGHFKIW-------------------HGAGSVLVAVSFSSVFGWAAT----QVAHM 118
R+G FK W H +G L+A + + W T V
Sbjct: 69 TRSRWGKFKPWILIGTITNSVVLYMLFSAHHFSGGALLAWVWLTYLLWGFTYTIMDVPFW 128
Query: 119 SMVNCITLNSTSRVVLTSCRNAFTMVAN 146
S+V ITL+ R L F +A
Sbjct: 129 SLVPTITLDKREREQLVPYPRFFASLAG 156
>sp|Q02581|MELB_KLEPN Melibiose carrier protein OS=Klebsiella pneumoniae GN=melB PE=3
SV=1
Length = 471
Score = 35.4 bits (80), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 56/148 (37%), Gaps = 28/148 (18%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID- 84
L YG G D + YL+ + TDI GLS + L +I D A +G +++
Sbjct: 9 LSYGFGAFGKDFAIGIVYMYLMYYYTDIVGLSVGVVGTLFLVARILDAIADPIMGWIVNC 68
Query: 85 ---RFGHFKIW-------------------HGAGSVLVAVSFSSVFGWAAT----QVAHM 118
R+G FK W H +G L+A + + W T V
Sbjct: 69 TRSRWGKFKPWILIGTITNSVVLYMLFSAHHFSGGALLAWVWLTYLLWGFTYTIMDVPFW 128
Query: 119 SMVNCITLNSTSRVVLTSCRNAFTMVAN 146
S+V ITL+ R L F +A
Sbjct: 129 SLVPTITLDKREREQLVPYPRFFASLAG 156
>sp|Q5ZLW3|DYM_CHICK Dymeclin OS=Gallus gallus GN=DYM PE=2 SV=1
Length = 669
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 163 KTHADLENQ-YRWIAYSSIFIGCCFVGIFLSRTEEPRLKM 201
K A+ +N + W A++++FI CC + +F+SR E L++
Sbjct: 89 KISAECQNHLFIWQAHNALFIICCLLKVFISRMSEEELQL 128
>sp|Q3T9M1|MFS2B_MOUSE Major facilitator superfamily domain-containing protein 2B OS=Mus
musculus GN=Mfsd2b PE=2 SV=1
Length = 494
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 136/362 (37%), Gaps = 53/362 (14%)
Query: 22 GRWSV---LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVML-----SGQIADG 73
GR SV + YG G + N + ++ YL LFL D+ P ++ L SG +AD
Sbjct: 27 GRLSVCTKVCYGIGGVPNQVASSASAFYLQLFLLDVAQIPAAQVSLALFGGKVSGAVADP 86
Query: 74 FATIFIGELIDRFGHFKI--WHGAGSVLVAV--------------------SFSSVFGWA 111
A FI + R G ++ W L+A+ SF +F
Sbjct: 87 VAGFFINK-SRRTGSGRLMPWALGCMPLIALAYFFLWFLPPFTSLRGLWYTSFYCLFQAL 145
Query: 112 AT--QVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 169
AT QV + ++ +T + R T+ R M L + ++ S + +
Sbjct: 146 ATFFQVPYTALTMILTPSPRERDSATAYRMTMEMAGTLMGATVHGLIVSSAHGSQRCEDT 205
Query: 170 NQYRWIAYS--------------SIFIGCCFVGIFLSRTEEPRLKMGLRGNS-HARISWA 214
R A S ++ C + L E+P G + A
Sbjct: 206 VHPRSPAVSPDVARLYCIAAAVVALTYPVCGSLLCLGVKEQPDTSAPASGQGLNFFTGLA 265
Query: 215 YWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSI 274
+ Y + + ++ V V Q+YL + + ++ + LV +I + S ++S
Sbjct: 266 ITSQHPPYLSLVVSFLFISAAVQVEQSYLVLFCTHASKLQDHVQNLV--LIILVSAVLST 323
Query: 275 LLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGI 334
L E W QR SA G+ V IL+ + + YV+A G++ A+ ++
Sbjct: 324 PLWE--WVLQRFGKKTSAFGIC-VMVPFSILLAAVPSAPVAYVVAFVSGVSIAVSLLLPW 380
Query: 335 SM 336
SM
Sbjct: 381 SM 382
>sp|Q6FDN3|GLPK_ACIAD Glycerol kinase OS=Acinetobacter sp. (strain ADP1) GN=glpK PE=3
SV=1
Length = 495
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 247 VINDLRMGQSAKALVPAIIYI-------CSFIVS--ILLQEMAWTGQRLKAYYSAGGVLW 297
V+ D R G KAL PAII+ C+ ++ +L+Q TG R+ Y+SAG ++W
Sbjct: 85 VVWDKRTG---KALAPAIIWQDRRAAQWCNTLIENGMLVQVQQKTGLRIDPYFSAGKLVW 141
Query: 298 VFCG-AGILIL 307
+ AG IL
Sbjct: 142 LLENIAGFRIL 152
>sp|O33814|LACP_STAXY Lactose permease OS=Staphylococcus xylosus GN=lacP PE=3 SV=1
Length = 462
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-- 85
+G G + D +L+ ++TDI GLSP ++ +I D +G ++D
Sbjct: 13 FGFGAIGKDAIFNIVSVFLMFYITDIVGLSPAFVGVMLFVARIWDAINDPIMGMIVDNTR 72
Query: 86 --FGHFKIWHGAGSVLVAV 102
FG FK W G+++ AV
Sbjct: 73 NNFGKFKTWLVIGTLINAV 91
>sp|Q6DCP6|DYM_XENLA Dymeclin OS=Xenopus laevis GN=dym PE=2 SV=1
Length = 669
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 163 KTHADLENQ-YRWIAYSSIFIGCCFVGIFLSRTEEPRL 199
K A+ +NQ + W A++++FI CC + +F S+ E L
Sbjct: 89 KISAECQNQLFIWQAHNALFIICCLIKVFTSQVSEEEL 126
>sp|P23936|LACY_STRTR Lactose permease OS=Streptococcus thermophilus GN=lacS PE=3 SV=1
Length = 634
Score = 32.0 bits (71), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 45/205 (21%)
Query: 25 SVLYYGSGHMLNDITAACWFTYLLLFLT----DIGLSPRGAAAVMLSG------QIADGF 74
S L Y +G ND+ A TY ++F+T + G + + V+L +I + F
Sbjct: 10 SRLSYAAGAFGNDVFYATLSTYFIMFVTTHLFNTGDPKQNSHYVLLITNIISILRILEVF 69
Query: 75 ATIFIGELID----RFGHFKIWHGAGSVLVAVS----FSSVFGWAAT------------- 113
IG +ID ++G FK W G ++ +++ F+ + G T
Sbjct: 70 IDPLIGNMIDNTNTKYGKFKPWVVGGGIISSITLLLLFTDLGGLNKTNPFLYLVLFGIIY 129
Query: 114 ----------QVAHMSMVNCITLNSTSRVVL-TSCRNAFTMVANLSLYAIAFIV--FSVS 160
+ SM+ ++L+S R + T R T+ AN+ AI IV FS++
Sbjct: 130 LVMDVFYSIKDIGFWSMIPALSLDSHEREKMATFARIGSTIGANIVGVAIMPIVLFFSMT 189
Query: 161 TAKTHADLENQYRWIAYSSIFIGCC 185
D ++ + W A+ IG
Sbjct: 190 NNSGSGD-KSGWFWFAFIVALIGVI 213
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,031,426
Number of Sequences: 539616
Number of extensions: 5452742
Number of successful extensions: 16464
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 16439
Number of HSP's gapped (non-prelim): 48
length of query: 445
length of database: 191,569,459
effective HSP length: 121
effective length of query: 324
effective length of database: 126,275,923
effective search space: 40913399052
effective search space used: 40913399052
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)