BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013325
(445 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14048|UBX2_SCHPO UBX domain-containing protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubx2 PE=1 SV=1
Length = 427
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 211/461 (45%), Gaps = 61/461 (13%)
Query: 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIA 68
D+ S+V++F I T E A ++L L AI LF+ ESG + S E +
Sbjct: 4 DEASLVANFCAI-TNSTPEKAQEYLSVADGDLSTAITLFF---ESGGVTDVQSSYIEAPS 59
Query: 69 NPGPEENSVTAGQEIGDEVRAPLPVVRDTLYDD-AMFYAGSG--------ARYPLHEPSS 119
P E E+RAP+ R+ L D A AG+ +P
Sbjct: 60 QTEPVE-----------EIRAPIAPTREVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQ 108
Query: 120 LIAFRNFDE---EMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAA 176
FD+ ++ P + S + S LA L+RPP+ ++ N S ++A+ A
Sbjct: 109 RRRMGIFDQSPSQIPFPSSNTEDSSEESDSSSRASRLAKLFRPPYDIISNLSLDEARIEA 168
Query: 177 SVQDKWLLVNLQSTKEFSSHMVLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYY 236
S Q +W+LVNLQ++ F VLNRD W +E+V + I +F+F Q+ DD G + +Y
Sbjct: 169 SSQKRWILVNLQTSTSFECQ-VLNRDLWKDESVKEVIRAHFLFLQLLDDEEPGMEFKRFY 227
Query: 237 KLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSST 296
+ S P + ++DP TG++++ W P + L F++G ++ + K P G+ +
Sbjct: 228 PVRSTPHIAILDPRTGERVKEWSKSFTPADFVIALNDFLEGCTLDETS--GRKNPLGAKS 285
Query: 297 TPQQKNKDKPDIENEELLQALAASM---ETIKDASGVSSS---------DTDVASTDKDE 344
QK + E+E++ +A+AAS+ + ++ G SSS D V D E
Sbjct: 286 ---QKPVEAMS-EDEQMHKAIAASLGNGNSTTESQGESSSQQAESHGVADDTVHKIDSAE 341
Query: 345 ASATEKPAYPILPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGS 404
A E P + R+ +R+P+G R R F TDP+ +++Y EG+
Sbjct: 342 CDAEEPSPGPN-----------VTRIQIRMPNGARFIRRFSLTDPVSKVYAYVKGVAEGA 390
Query: 405 EMKPFRLTHAIPGATKSLDYDSKLTFEDSGLANAMISVTWE 445
+ +PF LT SLD T +++G+ N + ++
Sbjct: 391 DKQPFSLTFQRKSLWTSLDS----TIKEAGIQNTALQFEFQ 427
>sp|Q5REY7|UBXN7_PONAB UBX domain-containing protein 7 OS=Pongo abelii GN=UBXN7 PE=2 SV=2
Length = 489
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 19/248 (7%)
Query: 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANP 70
+ ++ F I G + L+A + L+ A+ +F G G IA + + ++
Sbjct: 14 KGLIQQFTTI-TGASESVGKHMLEACNNNLEMAVTMFLDG---GGIAEEPSTSSASVSTV 69
Query: 71 GPEENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPLHEPSSLIAFRNFDEEM 130
P +EVRAP+P ++ L + + R P S FR+F E
Sbjct: 70 RPHTE---------EEVRAPIPQKQEILVEPEPLFGAPKRRRPAR--SIFDGFRDFQTET 118
Query: 131 KRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQST 190
R E E D LA L+RPP LM GSFE AK+ +Q+KWL++N+Q+
Sbjct: 119 IR---QEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNV 175
Query: 191 KEFSSHMVLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPI 250
++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P V ++DP
Sbjct: 176 QDFACQ-CLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPR 234
Query: 251 TGQKMRSW 258
TGQK+ W
Sbjct: 235 TGQKLVEW 242
>sp|O94888|UBXN7_HUMAN UBX domain-containing protein 7 OS=Homo sapiens GN=UBXN7 PE=1 SV=2
Length = 489
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 19/248 (7%)
Query: 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANP 70
+ ++ F I G + L+A + L+ A+ +F G G IA + + ++
Sbjct: 14 KGLIQQFTTI-TGASESVGKHMLEACNNNLEMAVTMFLDG---GGIAEEPSTSSASVSTV 69
Query: 71 GPEENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPLHEPSSLIAFRNFDEEM 130
P +EVRAP+P ++ L + + R P S FR+F E
Sbjct: 70 RPHTE---------EEVRAPIPQKQEILVEPEPLFGAPKRRRPAR--SIFDGFRDFQTET 118
Query: 131 KRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQST 190
R E E D LA L+RPP LM GSFE AK+ +Q+KWL++N+Q+
Sbjct: 119 IR---QEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNV 175
Query: 191 KEFSSHMVLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPI 250
++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P V ++DP
Sbjct: 176 QDFACQ-CLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPR 234
Query: 251 TGQKMRSW 258
TGQK+ W
Sbjct: 235 TGQKLVEW 242
>sp|Q6P5G6|UBXN7_MOUSE UBX domain-containing protein 7 OS=Mus musculus GN=Ubxn7 PE=1 SV=2
Length = 467
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 121/248 (48%), Gaps = 41/248 (16%)
Query: 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANP 70
+ ++ F I G + L+A + L+ A+ +F G G IA + + ++
Sbjct: 14 KGLIQQFTAI-TGASESVGKHMLEACNNNLEMAVTMFLDG---GGIAEEPSTSSASVSTV 69
Query: 71 GPEENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPLHEPSSLIAFRNFDEEM 130
P +EVRAP+P ++ L EP L R ++E+
Sbjct: 70 RPHTE---------EEVRAPIPQKQEILV----------------EPEPLFGVRQ-EQEL 103
Query: 131 KRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQST 190
+ G D LA L+RPP LM GSFE AK+ +Q+KWL++N+Q+
Sbjct: 104 RNGGA----------IDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNV 153
Query: 191 KEFSSHMVLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPI 250
++F+ LNRD W+NEAV I +FIFWQVY D+ EG++ +YKL P V ++DP
Sbjct: 154 QDFACQ-CLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPR 212
Query: 251 TGQKMRSW 258
TGQK+ W
Sbjct: 213 TGQKLVEW 220
>sp|Q55BU7|UBXN7_DICDI UBX domain-containing protein 7 homolog OS=Dictyostelium discoideum
GN=ubxd7 PE=4 SV=1
Length = 503
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 153/322 (47%), Gaps = 19/322 (5%)
Query: 13 MVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANPGP 72
++S+FL I + A L+ +W ++ ++ F+ N+ + + S
Sbjct: 6 ILSNFLSITGCDDSSLATTILENNNWDVERSVDFFFTMNDPSNVKPTTSSKKTSSPPTAS 65
Query: 73 EENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPLHEPSSLIAFRNFDEEMKR 132
++ + DE R P+P D L D +Y + Y + + AFR+F++E
Sbjct: 66 SSSASSEFDYNEDEFRDPIPQKMDKLVD--HYYQPTQRSYQ-KQTNVFEAFRDFEKER-- 120
Query: 133 PGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKE 192
G+ + + A + +L+ L++PP ++ G+F++ K A + ++LVN+Q +E
Sbjct: 121 -GINQDK------ATEKQKSLSELFKPPLDILTFGTFDEIKKMAEQKKYFVLVNIQDVQE 173
Query: 193 FSSHMVLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITG 252
F LNRDTW+N+ + + I NF+FWQV EGK Y + P + ++DP TG
Sbjct: 174 FDCQK-LNRDTWSNKDLKELIGENFVFWQVNSANPEGKWFTQIYPVFKFPYIAIIDPRTG 232
Query: 253 QKMRSWCGMVQPESLLEDLVPFMDGGPRE-QHAKVSHKRPRGSSTTPQQKNKDKPDIENE 311
QK++ G + E + + LV F+ Q G+S K + K + E+E
Sbjct: 233 QKLQDMTGFIDAEEMAQYLVTFLSTNSFSGQIDPPPSSSSSGAS-----KKQKKYNTEDE 287
Query: 312 ELLQALAASMETIKDASGVSSS 333
EL A+A S++ ++ + S S
Sbjct: 288 ELELAIALSLKQEQERNSKSGS 309
>sp|Q06682|UBX5_YEAST UBX domain-containing protein 5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX5 PE=1 SV=1
Length = 500
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 197/498 (39%), Gaps = 88/498 (17%)
Query: 14 VSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANP-GP 72
V F+ I A A QF++ L+ AI LF+ N A+ S++ +P + P P
Sbjct: 6 VDEFMAITGADDAAIATQFIEMADGNLNTAISLFF-ENGGAALLSSNNTPTPSNSTPMAP 64
Query: 73 EENSVTAGQEIGDE---------------VRAPLPVVRDTLYDDAMF---YAGSGARY-P 113
A ++ + VR P + L + + F Y G G R+ P
Sbjct: 65 TSVDSDADAQLAERLQREAYQQQQPDQDYVRPPDEARHEVLTETSGFPISYGGIGGRFEP 124
Query: 114 LHE---------PSSLIAFRNFD--------------------------EEMKRPGVWES 138
LH P S+ R D E ++ P +
Sbjct: 125 LHRVNDMFDEGRPESIFNQRLDDTNTNTYINDNSSDSLDSEEENDDDEYEYVEEPVIELD 184
Query: 139 EQGAAS---------TADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQS 189
E G S LA L+RPPF +M + AK A + KW+++N+Q
Sbjct: 185 EDGNIKEYTKLVRKPKTISKEQKLALLFRPPFSIMSKLDLDAAKQKARAKQKWIMINIQD 244
Query: 190 TKEFSSHMVLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKL---DSIPVVLV 246
+ F LNRD W++ V I NF+F Q ++ + +Y L D +P + +
Sbjct: 245 SGIFQCQ-ALNRDLWSSRPVKTIIKENFVFLQYQYESRNAQPYLQFYHLNNKDDLPHIAI 303
Query: 247 VDPITGQKMRSWCGMVQ-PESLLEDLVPFMDG---GPREQHAKVSHKRPRGSSTTPQQKN 302
+DPITG++++ W +V PE + ++ F+ P+ + V+ P+ TT ++
Sbjct: 304 LDPITGERVKQWNRVVPIPEQFISEINEFLASFSLDPKVPNPTVNEPLPKVDPTTLTEEQ 363
Query: 303 KDKPDIENEELLQALAASMETIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKV 362
+ + I+ + ++ E + S+ + + D S E +P P +P
Sbjct: 364 QMELAIKESLNNNSSKSNQEEVP-----STGEEQKRVQEPDPFSTIEARVHPEPPNKP-- 416
Query: 363 DRSLLCRVGVRLPDGRRMQRNF-LRTDPIQLLWSYCYSQLEGSEMKPFRLT-HAIPGATK 420
+ R+ +R DG R+ R F D ++ ++ ++++G F L H
Sbjct: 417 --GITTRIQIRTGDGSRLVRRFNALEDTVRTIYEVIKTEMDGFADSRFTLNDHQREDLID 474
Query: 421 SLDYDSKLTFEDSGLANA 438
L+ +T D+GL N+
Sbjct: 475 KLN----MTIADAGLKNS 488
>sp|Q6GQ69|FAF2B_XENLA FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1
Length = 445
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 114/276 (41%), Gaps = 42/276 (15%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNL-----QSTKEFSSHMVLNRDTWANEAVSQTISTNF 217
+ + G++ +A + A + ++LLV L Q + +F R+T V+ I++
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFC------RNTLCTSEVTHFINSRM 206
Query: 218 IFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPF 274
+FW + EG +V + P + ++ + ++M G++QP+ L+ L
Sbjct: 207 LFWACSSNKPEGFRVSQALHESTYPFLAMI-MLKDRRMTVVGRLEGLIQPQDLINQLTFI 265
Query: 275 MDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSD 334
++ Q VS + R + +++ + ++ +A S+ ++
Sbjct: 266 IEAN---QTYLVSERLER--------EERNQTQVLRQQQDEAYLVSLRADQEKERKKKEK 314
Query: 335 TDVASTDKDEASATE--------------KPAYPILPEEPKVDRSLLCRVGVRLPDGRRM 380
D +++EA + + LP EP D ++ ++P+G R+
Sbjct: 315 QDQKRREEEEAQRKQMLEERKKRNLEEEKERKSECLPAEPVPDHPDNVKIIFKMPNGTRV 374
Query: 381 QRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIP 416
+R FL T + ++ + +S E E F++ + P
Sbjct: 375 ERRFLFTQSLSVIHDFLFSLKETPE--KFQIVTSFP 408
>sp|Q96CS3|FAF2_HUMAN FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2
Length = 445
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 123/305 (40%), Gaps = 48/305 (15%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNL-----QSTKEFSSHMVLNRDTWANEAVSQTISTNF 217
+ + G++ +A + A + ++LLV L Q + EF R+T V I+T
Sbjct: 153 VFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFC------RNTLCAPEVISLINTRM 206
Query: 218 IFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPF 274
+FW + EG +V + ++ P + ++ + ++M G++QP+ L+ L
Sbjct: 207 LFWACSTNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFI 265
Query: 275 MDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSD 334
MD Q VS + R Q + ++E L +L A E +
Sbjct: 266 MDAN---QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKREERERK 318
Query: 335 TDVASTDKDEASATEKPAYPILPEEPKVDRSLLC-------------RVGVRLPDGRRMQ 381
+ + A E+ + E+ +R L C ++ +LP+ R++
Sbjct: 319 RRKEEEVQQQKLAEERRRQNLQEEK---ERKLECLPPEPSPDDPESVKIIFKLPNDSRVE 375
Query: 382 RNFLRTDPIQLLWSYCYSQLEGSEM------KPFRLTHAIPGATKSLDYDSKLTFEDSGL 435
R F + + ++ + +S E E P R+ IP S ++ + T +++GL
Sbjct: 376 RRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCIP----SEEWPNPPTLQEAGL 431
Query: 436 ANAMI 440
++ +
Sbjct: 432 SHTEV 436
>sp|Q28BP9|FAF2_XENTR FAS-associated factor 2 OS=Xenopus tropicalis GN=faf2 PE=2 SV=1
Length = 445
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 106/261 (40%), Gaps = 32/261 (12%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNL-----QSTKEFSSHMVLNRDTWANEAVSQTISTNF 217
+ + G++ +A + A + ++LLV L Q + +F R+T V+ +++
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFC------RNTLCIPEVTNFLNSRM 206
Query: 218 IFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPF 274
+FW + EG +V + ++ P + ++ + ++M G++QP+ L+ L
Sbjct: 207 LFWACSTNKPEGFRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPQDLINQLTFI 265
Query: 275 MDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSD 334
++ Q VS + R Q + ++E L +L A E +
Sbjct: 266 VEAN---QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKKEKQEQK 318
Query: 335 TDVASTDKDEASATEKPAYPI----------LPEEPKVDRSLLCRVGVRLPDGRRMQRNF 384
+ + E+ + LP EP D ++ ++P+G R++R F
Sbjct: 319 RREEEEAQLKQMLEERKKRNLEEEKERKSECLPAEPVPDHPDNVKIIFKMPNGTRVERRF 378
Query: 385 LRTDPIQLLWSYCYSQLEGSE 405
L T + ++ + +S E E
Sbjct: 379 LFTQSLSVIHDFLFSLKETPE 399
>sp|Q2HJD0|FAF2_BOVIN FAS-associated factor 2 OS=Bos taurus GN=FAF2 PE=2 SV=1
Length = 445
Score = 39.3 bits (90), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 107/268 (39%), Gaps = 41/268 (15%)
Query: 159 PPFHLMFNGSFEKAKDAASVQDKWLLVNL-----QSTKEFSSHMVLNRDTWANEAVSQTI 213
P F+L G++ +A + A + ++LLV L Q + EF R+T V I
Sbjct: 152 PVFYL---GTYSQALNDAKRELRFLLVYLHGDDHQDSDEFC------RNTLCAPEVISLI 202
Query: 214 STNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLED 270
+T +FW + EG +V + ++ P + ++ + ++M G++QP+ L+
Sbjct: 203 NTRMLFWACSTNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQ 261
Query: 271 LVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGV 330
L MD Q VS + R Q + ++E L +L A E +
Sbjct: 262 LTFIMDAN---QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKREE 314
Query: 331 SSSDTDVASTDKDEASATEKPAYPILPEEPKVDRSLLC-------------RVGVRLPDG 377
+ + A E+ + E+ +R L C ++ +LP+
Sbjct: 315 RERKRRKEEEVQQQKLAEERRRRNLQEEK---ERKLECLPPEPSPDDPESVKIIFKLPND 371
Query: 378 RRMQRNFLRTDPIQLLWSYCYSQLEGSE 405
R++R F + + ++ + +S E E
Sbjct: 372 SRVERRFHFSQSLTVIHDFLFSLKESPE 399
>sp|Q6AZH6|FAF2A_XENLA FAS-associated factor 2-A OS=Xenopus laevis GN=faf2-a PE=2 SV=1
Length = 445
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 111/272 (40%), Gaps = 34/272 (12%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNL-----QSTKEFSSHMVLNRDTWANEAVSQTISTNF 217
+ + G++ +A + A + ++LLV L Q + +F R+T V+ I++
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFC------RNTLCTPEVTHFINSRM 206
Query: 218 IFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPF 274
+FW + EG +V + ++ P + ++ + ++M G++QP+ L+ L
Sbjct: 207 LFWACSTNKPEGFRVSQALRENTYPFLGMIM-LKDRRMTVVGRLEGLMQPQDLINQLTFI 265
Query: 275 MDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSD 334
++ Q VS + R Q + ++E L +L A E +
Sbjct: 266 IEAN---QTYLVSERLEREERNETQVLRQQ----QDEAYLVSLRADQEKERKKKEKQEQK 318
Query: 335 TDVASTDKDEASATEKPAYPI----------LPEEPKVDRSLLCRVGVRLPDGRRMQRNF 384
+ + E+ + LP EP D ++ ++P+G R++R F
Sbjct: 319 RREEEEAQRKQMLEERKKRNLEEEKERKSECLPAEPVPDHPDNVKIIFKMPNGTRVERRF 378
Query: 385 LRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIP 416
L T + ++ + +S E E F++ + P
Sbjct: 379 LFTQSLSVIHDFLFSLKETPE--KFQIVTSFP 408
>sp|Q9QZ49|UBXN8_MOUSE UBX domain-containing protein 8 OS=Mus musculus GN=Ubxn8 PE=1 SV=1
Length = 277
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 309 ENEELLQALAASMETIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKVDRSLLC 368
E+ E + AS ETI + + ++ A + P LPEEP +
Sbjct: 139 EDSEFENSSQASFETINGEAARRQNLPKFSTEISPAARPLLRKEVPDLPEEPSETAEEVV 198
Query: 369 RVGVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIPGATKSLDYDSKL 428
V +R P+GR ++R F ++ Q+L + G +RL+ + P ++L+ +
Sbjct: 199 TVALRCPNGRVLRRRFFKSWNSQVLLDWMMKV--GYHKSLYRLSTSFP--RRALEVEGGS 254
Query: 429 TFEDSGL 435
+ ED G+
Sbjct: 255 SLEDIGI 261
>sp|Q3TDN2|FAF2_MOUSE FAS-associated factor 2 OS=Mus musculus GN=Faf2 PE=2 SV=2
Length = 445
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 120/300 (40%), Gaps = 38/300 (12%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMVLNRDTWANEAVSQTISTNFIFWQV 222
+ + G++ +A + A + ++LLV L S A E +S I++ +FW
Sbjct: 153 VFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNALCAPEVIS-LINSRMLFWAC 211
Query: 223 YDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGP 279
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 212 STNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMDAN- 269
Query: 280 REQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAS 339
Q VS + R Q + ++E L +L A E +
Sbjct: 270 --QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKREEKERKRRKEE 323
Query: 340 TDKDEASATEKPAYPILPEEPKVDRSLLC-------------RVGVRLPDGRRMQRNFLR 386
+ + A E+ + E+ +R L C ++ +LP+ R++R F
Sbjct: 324 EVQQQKLAEERRRQNLQEEK---ERKLECLPPEPSPDDPESVKIIFKLPNDSRVERRFHF 380
Query: 387 TDPIQLLWSYCYSQLEGSEM------KPFRLTHAIPGATKSLDYDSKLTFEDSGLANAMI 440
+ + ++ + +S E E P R+ +P S ++ + T +++GL++ +
Sbjct: 381 SQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVP----SEEWPNPPTLQEAGLSHTEV 436
>sp|Q5BK32|FAF2_RAT FAS-associated factor 2 OS=Rattus norvegicus GN=Faf2 PE=2 SV=1
Length = 346
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 101/259 (38%), Gaps = 28/259 (10%)
Query: 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMVLNRDTWANEAVSQTISTNFIFWQV 222
+ + G++ +A A + ++LLV L S A E +S I++ +FW
Sbjct: 54 VFYQGTYSQALSDAKRELRFLLVYLHGDDHQDSDEFCRNALCAPEVIS-LINSRMLFWAC 112
Query: 223 YDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR---SWCGMVQPESLLEDLVPFMDGGP 279
+ EG +V + ++ P + ++ + ++M G++QP+ L+ L MD
Sbjct: 113 STNKPEGYRVSQALRENTYPFLAMI-MLKDRRMTVVGRLEGLIQPDDLINQLTFIMDAN- 170
Query: 280 REQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVSSSDTDVAS 339
Q VS + R Q + ++E L +L A E +
Sbjct: 171 --QTYLVSERLEREERNQTQVLRQQ----QDEAYLASLRADQEKERKKREERERKRRKEE 224
Query: 340 TDKDEASATEKPAYPILPEEPKVDRSLLC-------------RVGVRLPDGRRMQRNFLR 386
+ + A E+ + E+ +R L C ++ +LP+ R++R F
Sbjct: 225 EVQQQKLAEERRRQNLQEEK---ERKLECLPPEPSPDDPDSVKIIFKLPNDSRVERRFHF 281
Query: 387 TDPIQLLWSYCYSQLEGSE 405
+ + ++ + +S E E
Sbjct: 282 SQSLTVIHDFLFSLKESPE 300
>sp|C5CAR1|SECA_MICLC Protein translocase subunit SecA OS=Micrococcus luteus (strain ATCC
4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 /
NCTC 2665 / VKM Ac-2230) GN=secA PE=3 SV=1
Length = 911
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 3 SVLSANDKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDE 42
S+L D Q V F+E AVG + A + QAT W LD+
Sbjct: 662 SILEGEDLQDRVRRFVEDAVGNIVDAATEEGQATDWDLDQ 701
>sp|Q9JL58|KCNK9_CAVPO Potassium channel subfamily K member 9 OS=Cavia porcellus GN=KCNK9
PE=1 SV=1
Length = 365
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 212 TISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW-----------CG 260
T+ T + T GK C +Y + IP+ LV+ G++M ++ CG
Sbjct: 89 TVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCG 148
Query: 261 MVQPESLLEDLV 272
M E +E++V
Sbjct: 149 MRNTEVSMENMV 160
>sp|Q3A7A9|CBID_PELCD Putative cobalt-precorrin-6A synthase [deacetylating] OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=cbiD PE=3
SV=1
Length = 350
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 31/130 (23%)
Query: 272 VPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENEELLQALAASMETIKDASGVS 331
+P +DG +H+ P G+ + D PD+ N L+ A V
Sbjct: 36 IPLLDGTRESLPLAYAHRLPDGAEAAVYKNAGDDPDVTNGALIIAR------------VV 83
Query: 332 SSDTDVASTDKDEASATEKPAYPILPEEPKV----------------DRSLLCRVGVRLP 375
+SD + + KP + P EP + DR L RV + +P
Sbjct: 84 ASDKPLEFRAGEGVGIITKPGLALPPGEPAINPGPRLMIESAVREVTDRGL--RVTIAIP 141
Query: 376 DGRRM-QRNF 384
DG+++ +R F
Sbjct: 142 DGKQLAERTF 151
>sp|Q9ES08|KCNK9_RAT Potassium channel subfamily K member 9 OS=Rattus norvegicus
GN=Kcnk9 PE=1 SV=2
Length = 396
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 212 TISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW-----------CG 260
T+ T + T GK C +Y + IP+ LV+ G++M ++ CG
Sbjct: 89 TVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCG 148
Query: 261 MVQPESLLEDLV 272
M E +E++V
Sbjct: 149 MRNTEVSMENMV 160
>sp|Q3LS21|KCNK9_MOUSE Potassium channel subfamily K member 9 OS=Mus musculus GN=Kcnk9
PE=2 SV=1
Length = 402
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 212 TISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW-----------CG 260
T+ T + T GK C +Y + IP+ LV+ G++M ++ CG
Sbjct: 89 TVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCG 148
Query: 261 MVQPESLLEDLV 272
M E +E++V
Sbjct: 149 MRNTEVSMENMV 160
>sp|O74498|UCP10_SCHPO UBX domain-containing protein 10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ucp10 PE=3 SV=1
Length = 427
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 356 LPEEPKVDRSLLCRVGVRLPDGRRMQRNFLRTDPIQLLWSYC-YSQLEGSEMKPF-RLTH 413
LP EP + R+ +R PDG R R F + D ++ +++Y Y E E + F R T
Sbjct: 317 LPPEPSSEDEP-ARLSIRFPDGSRAVRRFKKDDTVESVYNYVDYMLFEKEEPEEFGRATS 375
Query: 414 AIPGATKSLDYDSKLTFE-DSGLANAMI 440
+ T DY F+ S L A++
Sbjct: 376 SSNPVTPPSDYKHDFHFQLYSSLPRALL 403
>sp|Q08743|YO292_YEAST Vacuolar membrane protein YOR292C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YOR292C PE=1 SV=1
Length = 309
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 181 KWLLVNLQSTK--EFSSHMVLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKL 238
WLL+ + T +F+SH R +AN AV T+ TN + + + D ++ Y +
Sbjct: 57 HWLLLVIWVTSLWKFTSHY---RQLYANSAVFATLCTNILLFGISDILAQSIACFYSYHV 113
Query: 239 DSIPVVL 245
D IP +L
Sbjct: 114 DPIPQIL 120
>sp|O77713|ADA2B_DUGDU Alpha-2B adrenergic receptor (Fragment) OS=Dugong dugon GN=ADRA2B
PE=3 SV=2
Length = 390
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 284 AKVSHKRPRGSSTTPQQKNKDKP---DIENEEL--LQALAASMETIKDASGVSSSDTDV- 337
AK SH+R G+ P++ +P D L L LA+S+ +A+G S +
Sbjct: 186 AKRSHRRGPGAKGGPRKGESKQPHSLDSGPSALANLPTLASSLAVAGEANGHSMPPGEKE 245
Query: 338 ASTDKDEASATEKPAYPILPEEPKVDRSLLC 368
T +D + T P++P+LP + + +C
Sbjct: 246 RETSEDPGTPTLPPSWPVLPNSGQGQKGGVC 276
>sp|P54731|FAF1_MOUSE FAS-associated factor 1 OS=Mus musculus GN=Faf1 PE=1 SV=2
Length = 649
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 108/286 (37%), Gaps = 28/286 (9%)
Query: 153 LASLYRPPFHLMFNGSFEKAKDAA---SVQDKWLLVNLQSTKEFSSHMVLNRDTWANEAV 209
+S Y + F GS E A A +D+ LL E V E++
Sbjct: 340 FSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESI 399
Query: 210 SQTISTNFIFW--QVYDDTSEGK--KVCTYY------------KLDSIPVVLVV--DPIT 251
+S NFI W + DT+ + +C + K D P+ L++ +
Sbjct: 400 VSYLSQNFITWAWDLTKDTNRARFLTMCNRHFGSVIAQTIRTQKTDQFPLFLIIMGKRSS 459
Query: 252 GQKMRSWCGMVQPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKDKPDIENE 311
+ + G + L+ L+ M+ +Q + + R + +++ + +
Sbjct: 460 NEVLNVIQGNTTVDELMMRLMAAMEIFSAQQQEDIKDEDEREARENVKREQDEAYRLS-- 517
Query: 312 ELLQALAASMETIKDASGVSSSDTDVASTDKDEASATEKPAYPILPEEPKVDRSL-LCRV 370
L+A A E + + ++E A LP EPK + + + ++
Sbjct: 518 --LEADRAKREAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKL 575
Query: 371 GVRLPDGRRMQRNFLRTDPIQLLWSYCYSQLEGSEMKPFRLTHAIP 416
+R P G ++R FL ++ +Q+++ + S+ G F+L P
Sbjct: 576 RIRTPSGEFLERRFLASNKLQIVFDFVASK--GFPWDEFKLLSTFP 619
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,864,893
Number of Sequences: 539616
Number of extensions: 7116259
Number of successful extensions: 14936
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 14872
Number of HSP's gapped (non-prelim): 80
length of query: 445
length of database: 191,569,459
effective HSP length: 121
effective length of query: 324
effective length of database: 126,275,923
effective search space: 40913399052
effective search space used: 40913399052
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)