BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013328
(445 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 59 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNFKLART------- 111
W R ++ + +L S ++CLQE V ++ + + L GY A+
Sbjct: 423 WDYRRNKLKEQILSYDSDLLCLQE--VESKTFEEYWVPLLDKHGYTGIFHAKARAKTMHS 480
Query: 112 --NNRGDGLLTAVHKDYFRVVNYRDLLFN-------------DFGDRVAQLLHVELIDPF 156
+ + DG +D F+++ + F+ D+ +R +V L
Sbjct: 481 KDSKKVDGCCIFFKRDQFKLITKDAMDFSGAWMKHKKFQRTEDYLNRAMNKDNVALFLKL 540
Query: 157 SQCRNGDLRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQHVESYQKE---HN----LKP 209
+GD I V THL + D + V+ QV +L H+E+ KE HN +K
Sbjct: 541 QHIPSGD---TIWAVTTHLHW--DPKFNDVKTFQVGVLLDHLETLLKEETSHNFRQDIKK 595
Query: 210 IPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYTDADAHKWVSHRNHRGNIC 264
P+++CGD+N VY+ + + G V HQ + ++S +N N+
Sbjct: 596 FPVLICGDFNSYINSAVYELINT-GRVQ----IHQEGNGRDFGYMSEKNFSHNLA 645
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 293 FKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWV 351
F+ L++ E AF D DG+ G+ A E + +T L DEE ++
Sbjct: 18 FQSLMKDTDSEEEIREAFRVEDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIR 72
Query: 352 QADIDGNGVVDYKEFQQ 368
+ADIDG+G V+Y+EF Q
Sbjct: 73 EADIDGDGQVNYEEFVQ 89
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ GF A E + +T L DEE ++ +AD+DG+G V+Y+EF
Sbjct: 85 AFRVFDKDGN-----GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 139
Query: 368 Q 368
Q
Sbjct: 140 Q 140
Score = 33.5 bits (75), Expect = 0.28, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 11 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 366 FQQRIW-KTTWSDQRNDLN------DEDEDGFVKSS 394
F + K +D +L D+D +GF+ ++
Sbjct: 65 FLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAA 100
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ GF A E + +T L DEE ++ +AD+DG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 142
Query: 368 Q 368
Q
Sbjct: 143 Q 143
Score = 33.1 bits (74), Expect = 0.29, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 FQQRIW-KTTWSDQRNDLN------DEDEDGFVKSS 394
F + K +D +L D+D +GF+ ++
Sbjct: 68 FLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAA 103
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ GF A E + +T L DEE ++ +AD+DG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 142
Query: 368 Q 368
Q
Sbjct: 143 Q 143
Score = 33.9 bits (76), Expect = 0.17, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F---QQRIWKTTWSDQRND----LNDEDEDGFVKSS 394
F R K T S+++ + D+D +GF+ ++
Sbjct: 68 FLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAA 103
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 86 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 368 Q 368
Q
Sbjct: 141 Q 141
Score = 32.0 bits (71), Expect = 0.71, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 12 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 65
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 66 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 101
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D DG+ GF A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 86 AFRVFDKDGN-----GFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Score = 33.9 bits (76), Expect = 0.19, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F---QQRIWKTTWSDQRNDLN--DEDEDGFVKSS 394
F R K + + R D+D +GF+ ++
Sbjct: 68 FLTMMARKMKDSEEEIREAFRVFDKDGNGFISAA 101
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D DG+ GF A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Score = 33.1 bits (74), Expect = 0.31, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +GF+ ++
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 103
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 85 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 139
Query: 368 Q 368
Q
Sbjct: 140 Q 140
Score = 32.0 bits (71), Expect = 0.76, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 11 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 65 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 100
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 84 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 138
Query: 368 Q 368
Q
Sbjct: 139 Q 139
Score = 32.0 bits (71), Expect = 0.77, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 10 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 63
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 64 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 99
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 368 Q 368
Q
Sbjct: 143 Q 143
Score = 31.6 bits (70), Expect = 0.83, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 103
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 86 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 368 Q 368
Q
Sbjct: 141 Q 141
Score = 31.6 bits (70), Expect = 0.83, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 12 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 65
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 66 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 101
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D DG+ GF A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +GF+ ++
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 103
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 86 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 368 Q 368
Q
Sbjct: 141 Q 141
Score = 31.6 bits (70), Expect = 0.86, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 12 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 65
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 66 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 101
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 368 Q 368
Q
Sbjct: 143 Q 143
Score = 31.6 bits (70), Expect = 0.83, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 103
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 368 Q 368
Q
Sbjct: 143 Q 143
Score = 31.6 bits (70), Expect = 0.84, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 103
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 368 Q 368
Q
Sbjct: 143 Q 143
Score = 30.0 bits (66), Expect = 3.0, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DG+G +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGDGTIDFPE 67
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 103
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 87 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 141
Query: 368 Q 368
Q
Sbjct: 142 Q 142
Score = 31.6 bits (70), Expect = 0.92, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 13 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 66
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 67 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 102
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 38.1 bits (87), Expect = 0.011, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 7 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 368 Q 368
Q
Sbjct: 62 Q 62
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 37.7 bits (86), Expect = 0.013, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 10 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 368 Q 368
Q
Sbjct: 65 Q 65
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 37.7 bits (86), Expect = 0.013, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 13 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 368 Q 368
Q
Sbjct: 68 Q 68
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 14 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 368 Q 368
Q
Sbjct: 69 Q 69
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 10 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 368 Q 368
Q
Sbjct: 65 Q 65
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 11 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 368 Q 368
Q
Sbjct: 66 Q 66
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 380 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 434
Query: 368 QRI 370
Q +
Sbjct: 435 QMM 437
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DG+G +D+ E
Sbjct: 306 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGDGTIDFPE 359
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 360 FLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 395
>pdb|3NGQ|A Chain A, Crystal Structure Of The Human Cnot6l Nuclease Domain
Length = 398
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 84/218 (38%), Gaps = 39/218 (17%)
Query: 59 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF-------KLART 111
W R + I++ ++ + II LQE V E+ ++ L + GY F K+
Sbjct: 60 WEYRKKGIMEEIVNCDADIISLQE--VETEQYFTLFLPALKERGYDGFFSPKSRAKIMSE 117
Query: 112 NNRG--DGLLTAVHKDYFRVVNYRDLLFN---------------------DFGDRVAQLL 148
R DG + F +V + FN + G V +
Sbjct: 118 QERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEV 177
Query: 149 HVELIDPFSQCRNGDLRQEILIVNTHLLF-PHDSSLSLVR----LHQVYKILQHVESYQK 203
H EL + + +Q +++ N H+ + P S + L++ + +V IL+ S
Sbjct: 178 HKELFGAGMKPIHAADKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPG 237
Query: 204 EHNLKP--IPIILCGDWNGSKRGHVYKFLRSQGFVSSY 239
P IP++LC D N V ++L + G ++
Sbjct: 238 SPTADPNSIPLVLCADLNSLPDSGVVEYLSNGGVADNH 275
>pdb|3NGN|A Chain A, Crystal Structure Of The Human Cnot6l Nuclease Domain In
Complex With Amp
pdb|3NGO|A Chain A, Crystal Structure Of The Human Cnot6l Nuclease Domain In
Complex With Poly(A) Dna
Length = 398
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 84/218 (38%), Gaps = 39/218 (17%)
Query: 59 WFGRNQRILDWLLYERSSIICLQEFWVGNEELVDMYEKRLSDAGYVNF-------KLART 111
W R + I++ ++ + II LQE V E+ ++ L + GY F K+
Sbjct: 60 WEYRKKGIMEEIVNCDADIISLQE--VETEQYFTLFLPALKERGYDGFFSPKSRAKIMSE 117
Query: 112 NNRG--DGLLTAVHKDYFRVVNYRDLLFN---------------------DFGDRVAQLL 148
R DG + F +V + FN + G V +
Sbjct: 118 QERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEV 177
Query: 149 HVELIDPFSQCRNGDLRQEILIVNTHLLF-PHDSSLSLVR----LHQVYKILQHVESYQK 203
H EL + + +Q +++ N H+ + P S + L++ + +V IL+ S
Sbjct: 178 HKELFGAGMKPIHAADKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPG 237
Query: 204 EHNLKP--IPIILCGDWNGSKRGHVYKFLRSQGFVSSY 239
P IP++LC D N V ++L + G ++
Sbjct: 238 SPTADPNSIPLVLCADLNSLPDSGVVEYLSNGGVADNH 275
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 36.6 bits (83), Expect = 0.026, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +A+IDG+G V+Y+EF
Sbjct: 83 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 137
Query: 368 Q 368
Q
Sbjct: 138 Q 138
Score = 33.5 bits (75), Expect = 0.27, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 10 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 63
Query: 366 F---QQRIWKTTWSDQRND---LNDEDEDGFVKSS 394
F R K T S++ + + D+D +G++ ++
Sbjct: 64 FLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAA 98
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 368 QRI 370
Q +
Sbjct: 444 QMM 446
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 315 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 369 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 404
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 368 QRI 370
Q +
Sbjct: 444 QMM 446
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 315 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 366 FQQRIW-KTTWSDQRNDLN------DEDEDGFVKSS 394
F + K ++D ++ D+D +G++ ++
Sbjct: 369 FLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAA 404
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 355 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 409
Query: 368 QRI 370
Q +
Sbjct: 410 QMM 412
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 281 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 334
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 335 FLTMMARKMKDTDSEEE 351
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 368 Q 368
Q
Sbjct: 144 Q 144
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 F---QQRIWKTTWSDQ 378
F R K T S++
Sbjct: 69 FLTMMARKMKDTDSEE 84
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 36.6 bits (83), Expect = 0.027, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E + +T L DEE ++ +A+IDG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 142
Query: 368 Q 368
Q
Sbjct: 143 Q 143
Score = 31.6 bits (70), Expect = 0.83, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 68 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 103
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 390 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 444
Query: 368 QRI 370
Q +
Sbjct: 445 QMM 447
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 316 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 369
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 370 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 405
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 355 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 409
Query: 368 QRI 370
Q +
Sbjct: 410 QMM 412
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 281 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 334
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 335 FLTMMARKMKDTDSEEE 351
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 368 QRI 370
Q +
Sbjct: 444 QMM 446
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 315 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 366 F 366
F
Sbjct: 369 F 369
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 368 QRI 370
Q +
Sbjct: 444 QMM 446
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 315 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 369 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 404
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 368 QRI 370
Q +
Sbjct: 443 QMM 445
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DG+G +D+ E
Sbjct: 314 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 366 FQQRIW-KTTWSDQRNDLN------DEDEDGFVKSS 394
F + K ++D ++ D+D +G++ ++
Sbjct: 368 FLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAA 403
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 368 QRI 370
Q +
Sbjct: 444 QMM 446
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DG+G +D+ E
Sbjct: 315 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGDGTIDFPE 368
Query: 366 FQQRIW-KTTWSDQRNDLN------DEDEDGFVKSS 394
F + K ++D ++ D+D +G++ ++
Sbjct: 369 FLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAA 404
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 352 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 406
Query: 368 QRI 370
Q +
Sbjct: 407 QMM 409
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 278 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 331
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 332 FLTMMARKMKDTDSEEE 348
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 368 QRI 370
Q +
Sbjct: 443 QMM 445
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DG+G +D+ E
Sbjct: 314 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 366 FQQRIW-KTTWSDQRNDLN------DEDEDGFVKSS 394
F + K ++D ++ D+D +G++ ++
Sbjct: 368 FLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAA 403
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 368 QRI 370
Q +
Sbjct: 443 QMM 445
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DG+G +D+ E
Sbjct: 314 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +G++ ++
Sbjct: 368 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 403
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 36.2 bits (82), Expect = 0.037, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y++F
Sbjct: 12 AFRVFDKDGNGYISAADLRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 368 Q 368
Q
Sbjct: 67 Q 67
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 35.8 bits (81), Expect = 0.044, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLNL-TGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E ++ T L DEE + +ADIDG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
Query: 368 Q 368
Q
Sbjct: 143 Q 143
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D DG +GF A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 89 AFRVFDKDG-----NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +GF+ ++
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 104
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D DG +GF A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 89 AFRVFDKDG-----NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +GF+ ++
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 104
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 35.8 bits (81), Expect = 0.047, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLNL-TGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ G+ A E ++ T L DEE + +ADIDG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
Query: 368 Q 368
Q
Sbjct: 143 Q 143
Score = 28.5 bits (62), Expect = 6.9, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 15/84 (17%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGL--ADEETKDLWVQADIDGNGVVDY 363
+AF+ D DG T ++L G + E +D + D DGNG +D+
Sbjct: 14 EAFSLFDKDGDGTITT--------KELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 65
Query: 364 KEFQQRIWKTTWSDQRNDLNDEDE 387
EF T + + D + E+E
Sbjct: 66 PEFL-----TXXARKXKDTDSEEE 84
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 90 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 144
Query: 368 QRI 370
Q +
Sbjct: 145 QMM 147
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 16 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 69
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 70 FLTMMARKMKDTDSEEE 86
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 92 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 146
Query: 368 QRI 370
Q +
Sbjct: 147 QMM 149
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 18 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 71
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 72 FLTMMARKMKDTDSEEE 88
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 368 QRI 370
Q +
Sbjct: 144 QMM 146
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 69 FLTMMARKMKDTDSEEE 85
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 368 QRI 370
Q +
Sbjct: 144 QMM 146
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 69 FLTMMARKMKDTDSEEE 85
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 368 QRI 370
Q +
Sbjct: 144 QMM 146
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 69 FLTMMARKMKDTDSEEE 85
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 94 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDEMIREADIDGDGQVNYEEFV 148
Query: 368 QRI 370
Q +
Sbjct: 149 QMM 151
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 20 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 73
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 74 FLTMMARKMKDTDSEEE 90
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 35.8 bits (81), Expect = 0.056, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF D +G YI+ S + +NL G K L DEE + + +AD+DG+G V+Y+E
Sbjct: 8 EAFKVFDKDQNG-YISASELRHVM--INL-GEK--LTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 366 F 366
F
Sbjct: 62 F 62
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 35.4 bits (80), Expect = 0.061, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 15/85 (17%)
Query: 291 GMFKCLLRRASLTETDAFAFLKADNDGDYITYSGFCEALE----QLNLTGHKHGLADEET 346
G+ +R E AF D DGD GF E +NL G K + DEE
Sbjct: 70 GIMAKQMRETDTEEEMREAFKIFDRDGD-----GFISPAELRFVMINL-GEK--VTDEEI 121
Query: 347 KDLWVQADIDGNGVVDYKEFQQRIW 371
++ +AD DG+G+++Y+EF +W
Sbjct: 122 DEMIREADFDGDGMINYEEF---VW 143
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG +G+ A E + +T L DEE ++ +ADIDG+G V+Y+EF
Sbjct: 89 AFRVFDKDG-----NGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 368 QRI 370
Q +
Sbjct: 144 QMM 146
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 69 FLTMMARKMKDTDSEEE 85
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 35.0 bits (79), Expect = 0.081, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D DG+ GF A E + +T L+DEE ++ AD DG+G V+Y+EF
Sbjct: 88 AFRVFDKDGN-----GFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEF 141
Score = 32.7 bits (73), Expect = 0.46, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 297 LRRASLTE-TDAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGL--ADEETKDLWVQA 353
L +TE +AF+ D DG C +L G + E +D+ +
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDG--------CITTRELGTVMRSLGQNPTEAELRDMMSEI 55
Query: 354 DIDGNGVVDYKEF---QQRIWKTTWSDQRNDLN------DEDEDGFVKSS 394
D DGNG VD+ EF R K T D ++ D+D +GFV ++
Sbjct: 56 DRDGNGTVDFPEFLGMMARKMKDT--DNEEEIREAFRVFDKDGNGFVSAA 103
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG+ YI+ + + L G K L DEE + +ADIDG+G V+Y+EF
Sbjct: 89 AFRVFDKDGNGYISAAELRHVMTNL---GEK--LTDEEVDQMIREADIDGDGQVNYEEFV 143
Query: 368 QRI 370
Q +
Sbjct: 144 QMM 146
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 F---QQRIWKTTWSDQR 379
F R K T S++
Sbjct: 69 FLTMMARKMKDTDSEEE 85
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 34.7 bits (78), Expect = 0.11, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF D +G YI+ S + L G K L DEE + + +AD+DG+G V+Y+E
Sbjct: 13 EAFKVFDKDQNG-YISASELRHVMINL---GEK--LTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 366 F 366
F
Sbjct: 67 F 67
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D DG +GF A E + +T L DEE ++ ++DIDG+G V+Y+EF
Sbjct: 89 AFRVFDKDG-----NGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEF 142
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-TITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 F---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
F R K T S++ R D+D +GF+ ++
Sbjct: 69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 104
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF D +G YI+ S + +NL G K L DEE + + +AD+DG+G V+Y+E
Sbjct: 87 EAFKVFDKDQNG-YISASELRHVM--INL-GEK--LTDEEVEQMIKEADLDGDGQVNYEE 140
Query: 366 F 366
F
Sbjct: 141 F 141
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF D DG IT + L+ +EE +D+ + D DGNG +++ E
Sbjct: 14 EAFGLFDKDGDG-CITVEELATVIRSLD-----QNPTEEELQDMISEVDADGNGTIEFDE 67
Query: 366 FQQRIWKTTW-SDQRNDLN------DEDEDGFVKSS 394
F + K +D +L D+D++G++ +S
Sbjct: 68 FLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISAS 103
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AFA DN+G I+ S + L L+ ++ E DL + D+DGN +++ E
Sbjct: 14 EAFALFDKDNNGS-ISSSELATVMRSLGLSP-----SEAEVNDLMNEIDVDGNHQIEFSE 67
Query: 366 F---QQRIWKTTWSDQR----NDLNDEDEDGFVKSS 394
F R K+ S+Q + D++ DG + ++
Sbjct: 68 FLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAA 103
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AFA DN+G I+ S + L L+ ++ E DL + D+DGN +++ E
Sbjct: 14 EAFALFDKDNNGS-ISSSELATVMRSLGLSP-----SEAEVNDLMNEIDVDGNHQIEFSE 67
Query: 366 F---QQRIWKTTWSDQR----NDLNDEDEDGFVKSS 394
F R K+ S+Q + D++ DG + ++
Sbjct: 68 FLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAA 103
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AFA DN G I+ S + L L+ ++ E DL + D+DGN +++ E
Sbjct: 15 EAFALFDKDNSGS-ISASELATVMRSLGLSP-----SEAEVADLMNEIDVDGNHAIEFSE 68
Query: 366 F 366
F
Sbjct: 69 F 69
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+ F + DN G IT+ + L+++ L + E KDL ADID +G +DY E
Sbjct: 27 ELFKMIDTDNSGT-ITFDELKDGLKRVG-----SELMESEIKDLMDAADIDKSGTIDYGE 80
Query: 366 F 366
F
Sbjct: 81 F 81
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 34.3 bits (77), Expect = 0.15, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 323 SGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
+GF A E + +T L DEE ++ +AD+DG+G ++Y+EF
Sbjct: 18 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AFA DN+G I+ S + L L+ ++ E DL + D+DGN +++ E
Sbjct: 15 EAFALFDKDNNG-SISSSELATVMRSLGLSP-----SEAEVNDLMNEIDVDGNHQIEFSE 68
Query: 366 F---QQRIWKTTWSDQ 378
F R K+ S+Q
Sbjct: 69 FLALMSRQLKSNDSEQ 84
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 33.9 bits (76), Expect = 0.21, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D DG+ G A E + +T L D+E ++ +ADIDG+G ++Y+EF
Sbjct: 88 AFKVFDRDGN-----GLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
Score = 32.0 bits (71), Expect = 0.65, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AFA D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFALFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F 366
F
Sbjct: 68 F 68
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 33.9 bits (76), Expect = 0.21, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D DG+ G A E + +T L D+E ++ +ADIDG+G ++Y+EF
Sbjct: 88 AFKVFDRDGN-----GLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
Score = 32.0 bits (71), Expect = 0.65, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AFA D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFALFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F 366
F
Sbjct: 68 F 68
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 33.5 bits (75), Expect = 0.23, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AFA DN+G I+ S + L L+ ++ E DL + D+DGN +++ E
Sbjct: 14 EAFALFDKDNNGS-ISSSELATVMRSLGLSP-----SEAEVNDLMNEIDVDGNHQIEFSE 67
Query: 366 F 366
F
Sbjct: 68 F 68
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 323 SGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
+GF A E + +T L DEE ++ +AD+DG+G ++Y+EF
Sbjct: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 142
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-CITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 FQQRIW-KTTWSDQRNDLN------DEDEDGFVKSS 394
F + K +D +L D+D++GF+ ++
Sbjct: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 33.5 bits (75), Expect = 0.27, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 307 AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF A+ DG I + F ++++ + L D E ++ +AD DGNGV+D EF
Sbjct: 13 AFKVFDANGDG-VIDFDEFKFIMQKVG----EEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
Query: 367 QQRIWKT 373
I K+
Sbjct: 68 MDLIKKS 74
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 308 FAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
F + DN G IT+ + L+++ L + E KDL ADID +G +DY EF
Sbjct: 16 FKMIDTDNSG-TITFDELKDGLKRVGSE-----LMESEIKDLMDAADIDKSGTIDYGEF 68
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 33.1 bits (74), Expect = 0.33, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLN--LTGHKHGLADEETKDLWVQADIDGNGVVDY 363
+AF D DG C +E+L + +EE +D+ + D DGNG +++
Sbjct: 14 EAFGLFDKDGDG--------CITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 364 KEF 366
EF
Sbjct: 66 DEF 68
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 32.7 bits (73), Expect = 0.37, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLN--LTGHKHGLADEETKDLWVQADIDGNGVVDY 363
+AF D DG C +E+L + +EE +D+ + D DGNG +++
Sbjct: 14 EAFGLFDKDGDG--------CITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 364 KEF 366
EF
Sbjct: 66 DEF 68
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 32.7 bits (73), Expect = 0.37, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D DG+ G A E + +T L D+E ++ +ADIDG+G ++Y+EF
Sbjct: 13 AFKVFDRDGN-----GLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF D +G YI+ + + L G K L DEE ++ +A IDG+G V+Y++
Sbjct: 388 EAFRVFGKDGNG-YISAAQLRHVMTNL---GEK--LTDEEVDEMIREAGIDGDGQVNYEQ 441
Query: 366 FQQRI 370
F Q +
Sbjct: 442 FVQMM 446
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 323 SGFCEALEQLN-LTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
+GF A E + +T L DEE ++ +AD+DG+G ++Y EF
Sbjct: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEF 142
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDG-CITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 FQQRIW-KTTWSDQRNDLN------DEDEDGFVKSS 394
F + K +D +L D+D++GF+ ++
Sbjct: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 32.7 bits (73), Expect = 0.47, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLYDKDGDGT-ITTKELGTVMRSLGLNP-----TEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F 366
F
Sbjct: 68 F 68
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 32.0 bits (71), Expect = 0.80, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 334 LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK 372
LTG L D E +L ++D NG +DYK+F + + +
Sbjct: 109 LTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 32.0 bits (71), Expect = 0.80, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 334 LTGHKHGLADEETKDLWVQADIDGNGVVDYKEFQQRIWK 372
LTG L D E +L ++D NG +DYK+F + + +
Sbjct: 31 LTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 69
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 31.6 bits (70), Expect = 0.86, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 11/82 (13%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 FQQRIWKTTWSDQRNDLNDEDE 387
F T + + D + E+E
Sbjct: 68 FL-----TMMARKMKDTDSEEE 84
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 309 AFLKADNDGDYITYSGFCEALEQLNL-TGHKHGLADEETKDLWVQADIDGNGVVDYKEFQ 367
AF D DG +G+ A E ++ T L DEE +ADIDG+G V+Y+EF
Sbjct: 89 AFRVFDKDG-----NGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFV 143
Query: 368 Q 368
Q
Sbjct: 144 Q 144
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 306 DAFAFLKADNDG--DYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDY 363
D F F+ D G D F + E +G + L + ETK L AD DG+G +
Sbjct: 46 DVFRFIDNDQSGYLDEEELKFFLQKFE----SGARE-LTESETKSLMAAADNDGDGKIGA 100
Query: 364 KEFQQRI 370
+EFQ+ +
Sbjct: 101 EEFQEMV 107
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 341 LADEETKDLWVQADIDGNGVVDYKEFQ 367
L ++E +++ + D DG+G VDY+EF+
Sbjct: 40 LTEDEIENMIAETDTDGSGTVDYEEFK 66
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F 366
F
Sbjct: 68 F 68
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
DAF + DG+ I+ S EA+ +L GH+ G D +++ D++G+G VD++E
Sbjct: 106 DAFREFDTNGDGE-ISTSELREAMRKL--LGHQVGHRD--IEEIIRDVDLNGDGRVDFEE 160
Query: 366 F 366
F
Sbjct: 161 F 161
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F 366
F
Sbjct: 68 F 68
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F 366
F
Sbjct: 68 F 68
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F 366
F
Sbjct: 68 F 68
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F 366
F
Sbjct: 68 F 68
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 15 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 366 F 366
F
Sbjct: 69 F 69
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
+AF+ D DG IT + L + E +D+ + D DGNG +D+ E
Sbjct: 14 EAFSLFDKDGDGT-ITTKELGTVMRSLG-----QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 366 F 366
F
Sbjct: 68 F 68
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
DAF + DG+ I+ S EA+ +L GH+ G D E ++ D++G+G VD++E
Sbjct: 11 DAFREFDTNGDGE-ISTSELREAMRKL--LGHQVGHRDIE--EIIRDVDLNGDGRVDFEE 65
Query: 366 F 366
F
Sbjct: 66 F 66
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 30.8 bits (68), Expect = 1.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 310 FLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
F + D +GD I+ S +AL L T + +E + + + D DG+G +D+ EF
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGST------SADEVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.8 bits (68), Expect = 1.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 310 FLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
F + D +GD I+ S +AL L T + +E + + + D DG+G +D+ EF
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGST------SADEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 30.8 bits (68), Expect = 1.4, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGL--ADEETKDLWVQADIDGNGVVDY 363
+AF+ D DG C ++L G + E +D+ + D DGNG +D+
Sbjct: 14 EAFSLFDKDGDG--------CITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 364 KEF 366
EF
Sbjct: 66 PEF 68
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
DAF + DG+ I+ S EA+ +L GH+ G D +++ D++G+G VD++E
Sbjct: 92 DAFREFDTNGDGE-ISTSELREAMRKL--LGHQVGHRD--IEEIIRDVDLNGDGRVDFEE 146
Query: 366 F 366
F
Sbjct: 147 F 147
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 30.8 bits (68), Expect = 1.6, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 299 RASLTETDAFAFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDG 357
RA L + AF D DGD +IT A+ G L EE + +AD+D
Sbjct: 2 RAGLEDLQV-AFRAFDQDGDGHITVDELRRAM-----AGLGQPLPQEELDAMIREADVDQ 55
Query: 358 NGVVDYKEFQQRI 370
+G V+Y+EF + +
Sbjct: 56 DGRVNYEEFARML 68
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 308 FAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
F + AD G IT+ L+++ L + E DL AD+D +G +DYKEF
Sbjct: 33 FNXIDADKSG-QITFEELKAGLKRVGAN-----LKESEILDLXQAADVDNSGTIDYKEF 85
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 11/69 (15%)
Query: 306 DAFAFLKADN----DGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVV 361
D F F+ D DGD + Y F + + L + ETK L AD DG+G +
Sbjct: 45 DIFRFIDNDQSGYLDGDELKY--FLQKFQS-----DARELTESETKSLMDAADNDGDGKI 97
Query: 362 DYKEFQQRI 370
EFQ+ +
Sbjct: 98 GADEFQEMV 106
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 306 DAFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKE 365
DAF + DG+ I+ S EA+ L GH+ G D +++ D++G+G VD++E
Sbjct: 92 DAFREFDTNGDGE-ISTSELREAMRAL--LGHQVGHRD--IEEIIRDVDLNGDGRVDFEE 146
Query: 366 F 366
F
Sbjct: 147 F 147
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 29.6 bits (65), Expect = 3.2, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWVQADIDGNGVVDYKEF 366
AF D +G+ YI+ E L +L+ T L+ E+ + + D DG+G VD++EF
Sbjct: 8 AFRLYDKEGNGYISTDVMREILAELDET-----LSSEDLDAMIDEIDADGSGTVDFEEF 61
>pdb|1ZMB|A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase
From Clostridium Acetobutylicum, Northeast Structural
Genomics Target Car6
pdb|1ZMB|B Chain B, Crystal Structure Of The Putative Acetylxylan Esterase
From Clostridium Acetobutylicum, Northeast Structural
Genomics Target Car6
pdb|1ZMB|C Chain C, Crystal Structure Of The Putative Acetylxylan Esterase
From Clostridium Acetobutylicum, Northeast Structural
Genomics Target Car6
pdb|1ZMB|D Chain D, Crystal Structure Of The Putative Acetylxylan Esterase
From Clostridium Acetobutylicum, Northeast Structural
Genomics Target Car6
pdb|1ZMB|E Chain E, Crystal Structure Of The Putative Acetylxylan Esterase
From Clostridium Acetobutylicum, Northeast Structural
Genomics Target Car6
pdb|1ZMB|F Chain F, Crystal Structure Of The Putative Acetylxylan Esterase
From Clostridium Acetobutylicum, Northeast Structural
Genomics Target Car6
Length = 290
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 173 THLLFPHDSSLSLVRLHQVY--KILQHVESYQKEHNLKPIPIIL--CGDWNGSKR 223
T +L+ S SL ++VY K+L +E+ +KE N+ IPII+ GD+ G +R
Sbjct: 112 TGILWHQGESDSLNGNYKVYYKKLLLIIEALRKELNVPDIPIIIGGLGDFLGKER 166
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Query: 253 WVSHRNHRGNICGVDFIWLLNPNKYR 278
WV++R HRG+ CGV +LLN ++R
Sbjct: 90 WVAYRQHRGHKCGV---FLLNGPEWR 112
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 345 ETKDLWVQADIDGNGVVDYKEF---QQRIWKTTWSDQ--RNDLN--DEDEDGFVKSS 394
E +D+ + D DGNG +D+ EF R K T S++ R D+D +G++ ++
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 58
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 28.9 bits (63), Expect = 5.9, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 341 LADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT 374
L DEE +++ +AD DG+G V +EF + + KT+
Sbjct: 54 LTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTS 87
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 28.9 bits (63), Expect = 6.4, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 341 LADEETKDLWVQADIDGNGVVDYKEFQQRIWKTT 374
L DEE +++ +AD DG+G V +EF + + KT+
Sbjct: 44 LTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTS 77
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 17/144 (11%)
Query: 236 VSSYDTAHQYTDADAHKWVSHRNHRGNICGVDFIWLLNPNKYRKLLKASWSEAVFGMFKC 295
V + A Q D D ++S + R + L + ++ + F MF
Sbjct: 56 VQEFKEAFQLIDQDKDGFISKNDIRATFDSLG--RLCTEQELDSMVAEAPGPINFTMFLT 113
Query: 296 LL--RRASLTETD----AFAFLKADNDGDYITYSGFC-EALEQLNLTGHKHGLADEETKD 348
+ R A E D AF ++GD G C E + +LT + +E
Sbjct: 114 IFGDRIAGTDEEDVIVNAFNLF---DEGD-----GKCKEETLKRSLTTWGEKFSQDEVDQ 165
Query: 349 LWVQADIDGNGVVDYKEFQQRIWK 372
+A IDGNG++D K+F Q + K
Sbjct: 166 ALSEAPIDGNGLIDIKKFAQILTK 189
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 307 AFAFLKADNDGDYITYSGFCEALEQLNLTGHKHGLADE----ETKDLWVQADIDGNGVVD 362
AF DNDG+ IT + L G+K G E + K + + D +G+G +D
Sbjct: 130 AFRVFDVDNDGE-ITTAELAHVL----FNGNKRGNITERDVNQVKKMIREVDKNGDGKID 184
Query: 363 YKEFQQRIWKT 373
+ EF + + T
Sbjct: 185 FYEFSEMMKLT 195
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 309 AFLKADNDGD-YITYSGFCEALEQLNLTGHKHGLADEETKDLWV-QADIDGNGVVDYKEF 366
FL D DG YIT + LE K GL DL + Q D DG+G +DY EF
Sbjct: 57 TFLVLDEDGKGYITKEQLKKGLE-------KDGLKLPYNFDLLLDQIDSDGSGKIDYTEF 109
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,170,573
Number of Sequences: 62578
Number of extensions: 621712
Number of successful extensions: 1797
Number of sequences better than 100.0: 127
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1582
Number of HSP's gapped (non-prelim): 252
length of query: 445
length of database: 14,973,337
effective HSP length: 102
effective length of query: 343
effective length of database: 8,590,381
effective search space: 2946500683
effective search space used: 2946500683
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)