Your job contains 1 sequence.
>013329
MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLV
ASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVE
PIDASECGPDVPGISDRRTGQFSAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDD
SAAQNVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPP
TDFPQNRNFKDEKFFQPQMPPTRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQ
NHSMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQVSANSWPSYGNSPSTEVKMNKVD
RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPSSVD
YDEDEDEEEEMASRDSSPDNDTSGN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013329
(445 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2163198 - symbol:TOC1 "TIMING OF CAB EXPRESSIO... 503 3.0e-93 2
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 193 1.3e-24 2
TAIR|locus:2151206 - symbol:PRR7 "pseudo-response regulat... 207 3.1e-23 2
TAIR|locus:2062749 - symbol:AT2G46670 "AT2G46670" species... 193 9.9e-15 1
TAIR|locus:2007482 - symbol:AT1G07050 "AT1G07050" species... 135 2.7e-07 1
TAIR|locus:2090374 - symbol:ASML2 "activator of spomin::L... 134 1.6e-06 2
TAIR|locus:2172545 - symbol:COL5 "CONSTANS-like 5" specie... 138 1.8e-06 1
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 135 2.5e-06 1
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 134 4.8e-06 1
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 130 1.4e-05 1
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 130 1.5e-05 1
TAIR|locus:2145698 - symbol:AT5G14370 species:3702 "Arabi... 129 1.7e-05 1
TAIR|locus:2028421 - symbol:BBX17 "B-box domain protein 1... 128 2.0e-05 1
UNIPROTKB|Q9FDX8 - symbol:HD1 "Zinc finger protein HD1" s... 129 2.2e-05 1
UNIPROTKB|Q9FE92 - symbol:Hd1 "Heading day 1" species:453... 129 2.3e-05 1
TAIR|locus:2195518 - symbol:AT1G63820 species:3702 "Arabi... 126 2.6e-05 1
TAIR|locus:2175564 - symbol:CIA2 "chloroplast import appa... 129 2.6e-05 1
TAIR|locus:2177911 - symbol:AT5G41380 "AT5G41380" species... 125 3.8e-05 1
TAIR|locus:2017582 - symbol:ZML2 "ZIM-LIKE 2" species:370... 124 4.7e-05 1
TAIR|locus:2031581 - symbol:BBX16 "B-box domain protein 1... 126 4.7e-05 1
TAIR|locus:2031180 - symbol:BBX15 "B-box domain protein 1... 124 8.7e-05 1
TAIR|locus:2201277 - symbol:BBX14 "B-box domain protein 1... 123 0.00011 1
TAIR|locus:2043288 - symbol:AT2G47890 species:3702 "Arabi... 119 0.00021 1
TAIR|locus:2051099 - symbol:AT2G33350 "AT2G33350" species... 120 0.00023 2
TAIR|locus:2164718 - symbol:BBX8 "B-box domain protein 8"... 116 0.00056 1
TAIR|locus:2018344 - symbol:AT1G04500 "AT1G04500" species... 115 0.00077 1
TAIR|locus:505006360 - symbol:ZML1 "ZIM-like 1" species:3... 113 0.00079 1
TAIR|locus:2129860 - symbol:BBX9 "B-box domain protein 9"... 113 0.00097 1
>TAIR|locus:2163198 [details] [associations]
symbol:TOC1 "TIMING OF CAB EXPRESSION 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010031 "circumnutation" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010629 "negative regulation of gene expression"
evidence=IDA] [GO:0009639 "response to red or far red light"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072
Pfam:PF06203 PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0006351
GO:GO:0010629 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AB041530 EMBL:AF272039 EMBL:AJ251086 EMBL:AB010073
EMBL:AY094393 EMBL:BT005816 IPI:IPI00517214 PIR:T52075 PIR:T52076
RefSeq:NP_200946.1 UniGene:At.21919 ProteinModelPortal:Q9LKL2
SMR:Q9LKL2 IntAct:Q9LKL2 STRING:Q9LKL2 EnsemblPlants:AT5G61380.1
GeneID:836259 KEGG:ath:AT5G61380 GeneFarm:4313 TAIR:At5g61380
eggNOG:NOG242953 HOGENOM:HOG000034017 InParanoid:Q9LKL2 KO:K12127
OMA:IPIIMMS PhylomeDB:Q9LKL2 ProtClustDB:CLSN2686914
Genevestigator:Q9LKL2 GermOnline:AT5G61380 GO:GO:0010031
Uniprot:Q9LKL2
Length = 618
Score = 503 (182.1 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 128/281 (45%), Positives = 165/281 (58%)
Query: 164 KSNMPRDSS--PRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHENGEAWENY-SQGED 220
KS + R + P +VN + S + EK Q + +++T+ E Y SQGE
Sbjct: 325 KSTVLRTNGQDPPLVNGNGSHHLHRGAAEKFQVVASEGINNTKQAHRSRGTEQYHSQGET 384
Query: 221 FRSSSSVPDSLSMERSSTPPTDFPQN-RNFKDEKFFQPQMPPTRNEP-----------PQ 268
++ +S P SL ERS T PT + RN+++ PQ+ R++ P
Sbjct: 385 LQNGASYPHSL--ERSRTLPTSMESHGRNYQEGNMNIPQVAMNRSKDSSQVDGSGFSAPN 442
Query: 269 ATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNHSMLPQYNH-LPQCVP-HVNGMASFPY 326
A Y YYM G MNQVM+ S++ M+PQY H +P C P H NGM +PY
Sbjct: 443 A-YPYYMHGVMNQVMMQSAA---------------MMPQYGHQIPHCQPNHPNGMTGYPY 486
Query: 327 Y--PIN-------MCLQPGQVSA--NSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKE 375
Y P+N M LQ GQ+S +SW GN PS EV++NK+DRRE AL+KFR+KR +
Sbjct: 487 YHHPMNTSLQHSQMSLQNGQMSMVHHSWSPAGNPPSNEVRVNKLDRREEALLKFRRKRNQ 546
Query: 376 RCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 416
RCFDKKIRYVNRKRLAERRPRV+GQFVRK+NGVNVDLNGQP
Sbjct: 547 RCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQP 587
Score = 445 (161.7 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 103/218 (47%), Positives = 123/218 (56%)
Query: 1 MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLV 60
MS QDEV VVVKCL+LGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKN+LSYDFDLV
Sbjct: 100 MSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLV 159
Query: 61 ASDPSDANTNSTTLFXXXXXXXXXXXXNPEIGMSTHQXXXXXXXXX------------XX 108
SD SD NTNST LF NP+ G +HQ
Sbjct: 160 GSDQSDPNTNSTNLFSDDTDDRSLRSTNPQRGNLSHQENEWSVATAPVHARDGGLGADGT 219
Query: 109 XXXXXXXXXXXXPIDASECGPDVPGISDRRTGQFSAGPKKIELRIGESSAFFTYVKSNMP 168
P+D P + QFS+ PKK L+IGESSAFFTYVKS +
Sbjct: 220 ATSSLAVTAIEPPLDHLAGSHHEPMKRNSNPAQFSSAPKKSRLKIGESSAFFTYVKSTVL 279
Query: 169 RDSS--PRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTR 204
R + P +V+ + S + + EK Q + +++T+
Sbjct: 280 RTNGQDPPLVDGNGSLHLHRGLAEKFQVVASEGINNTK 317
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 193 (73.0 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 336 GQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRP 395
GQ S+ P S + + ++ +REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RP
Sbjct: 394 GQSSSTEKPK--EEESAKQRWSR-SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRP 450
Query: 396 RVRGQFVRKVN 406
RV+GQFVR VN
Sbjct: 451 RVKGQFVRTVN 461
Score = 157 (60.3 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 1 MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 41
MS+QD + +V+KC+ GAADYL+KP+R NEL NLW H+WRR
Sbjct: 118 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158
>TAIR|locus:2151206 [details] [associations]
symbol:PRR7 "pseudo-response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0010017 "red or far-red light signaling
pathway" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009639 "response to red or far red light" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0048574 "long-day photoperiodism, flowering" evidence=RCA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005739
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0035556 GO:GO:0003677 GO:GO:0007623 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:AB046954
EMBL:AL162973 EMBL:AY039943 EMBL:AY142560 IPI:IPI00520937
PIR:T48302 RefSeq:NP_568107.1 UniGene:At.20552
ProteinModelPortal:Q93WK5 SMR:Q93WK5 STRING:Q93WK5 PRIDE:Q93WK5
EnsemblPlants:AT5G02810.1 GeneID:831793 KEGG:ath:AT5G02810
GeneFarm:4348 TAIR:At5g02810 eggNOG:COG3437 HOGENOM:HOG000034018
InParanoid:Q93WK5 KO:K12129 OMA:HDERNIL PhylomeDB:Q93WK5
ProtClustDB:CLSN2917538 Genevestigator:Q93WK5 GermOnline:AT5G02810
GO:GO:0010017 GO:GO:0009266 Uniprot:Q93WK5
Length = 727
Score = 207 (77.9 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 78/273 (28%), Positives = 123/273 (45%)
Query: 151 LRIGESSAFFTY-VKSNMPRDSSPRI--VNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHE 207
LR E SAF Y SN + S + ++ D+ +Q++ + + C ++++ H
Sbjct: 455 LRRSEGSAFSRYNPASNANKISGGNLGSTSLQDNNSQDLIKKTEAAYDCHSNMNESLPHN 514
Query: 208 NGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEPP 267
+ ++ +F SS+ ++ + + P + + K F QP P +
Sbjct: 515 H----RSHVGSNNFDMSSTTENN-AFTKPGAPKVSSAGSSSVKHSSF-QPL--PCDHHNN 566
Query: 268 QATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNHSMLPQYNHLPQCVPH-VNG----MA 322
A+Y ++ S+ +Y + + E N+++ N H NG
Sbjct: 567 HASYNLVHVAERKKLPPQCGSSNVYNETI-EGNNNTVNYSVNGSVSGSGHGSNGPYGSSN 625
Query: 323 SFPYYPINMCLQPGQ-VSAN---SWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCF 378
+NM G + N S G+ NK+ +REAAL KFRQKRKERCF
Sbjct: 626 GMNAGGMNMGSDNGAGKNGNGDGSGSGSGSGSGNLADENKISQREAALTKFRQKRKERCF 685
Query: 379 DKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVD 411
KK+RY +RK+LAE+RPRVRGQFVRK D
Sbjct: 686 RKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDD 718
Score = 135 (52.6 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 1 MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 41
MS+ D + +V KCL GA D+LVKP+R NEL LW H+WRR
Sbjct: 159 MSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRR 199
Score = 58 (25.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 24/90 (26%), Positives = 39/90 (43%)
Query: 156 SSAFFTYVKSNMPRDSSPRIVN----VDDSAAQNVRMEEKCQPCCQQVV--SDTRIHENG 209
S A ++ K + D SPR V+ VD + AQ V + P Q V ++ E+
Sbjct: 254 SGAQSSWTKKAVDVDDSPRAVSLWDRVDSTCAQVVHSNPEF-PSNQLVAPPAEKETQEHD 312
Query: 210 EAWENYSQGEDFRSSSSVPDSLSMERSSTP 239
+ +E+ + G D S L++E P
Sbjct: 313 DKFEDVTMGRDLEISIRRNCDLALEPKDEP 342
>TAIR|locus:2062749 [details] [associations]
symbol:AT2G46670 "AT2G46670" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 GenomeReviews:CT485783_GR UniGene:At.65052
EMBL:AB493594 IPI:IPI00540845 RefSeq:NP_182190.2
EnsemblPlants:AT2G46670.1 GeneID:819279 KEGG:ath:AT2G46670
TAIR:At2g46670 PhylomeDB:C0SV91 Genevestigator:Q3EBF0
Uniprot:C0SV91
Length = 183
Score = 193 (73.0 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 336 GQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRP 395
GQ S+ P S + + ++ +REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RP
Sbjct: 109 GQSSSTEKPK--EEESAKQRWSR-SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRP 165
Query: 396 RVRGQFVRKVN 406
RV+GQFVR VN
Sbjct: 166 RVKGQFVRTVN 176
>TAIR|locus:2007482 [details] [associations]
symbol:AT1G07050 "AT1G07050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AY085907 EMBL:AK176556 EMBL:AB493438
IPI:IPI00532995 RefSeq:NP_563778.1 UniGene:At.42316 STRING:Q8LDM8
EnsemblPlants:AT1G07050.1 GeneID:837216 KEGG:ath:AT1G07050
TAIR:At1g07050 eggNOG:NOG283732 HOGENOM:HOG000090331
InParanoid:Q8LDM8 OMA:NMRREAS PhylomeDB:Q8LDM8
ProtClustDB:CLSN2687713 ArrayExpress:Q8LDM8 Genevestigator:Q8LDM8
Uniprot:Q8LDM8
Length = 195
Score = 135 (52.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 347 GNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 404
G P E K N RREA+++++++KR+ R F KKIRY RK A++RPR +G+FV++
Sbjct: 138 GEVPVIEEKRNM--RREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
>TAIR|locus:2090374 [details] [associations]
symbol:ASML2 "activator of spomin::LUC2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0010182 "sugar mediated signaling pathway" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0010182
EMBL:AC023838 EMBL:AP000385 EMBL:AY085594 EMBL:AY885244
IPI:IPI00524505 RefSeq:NP_566437.1 UniGene:At.39532 STRING:Q9LDL9
EnsemblPlants:AT3G12890.1 GeneID:820472 KEGG:ath:AT3G12890
TAIR:At3g12890 eggNOG:NOG274941 HOGENOM:HOG000152986
InParanoid:Q9LDL9 OMA:FARNNDT PhylomeDB:Q9LDL9
ProtClustDB:CLSN2914977 Genevestigator:Q9LDL9 Uniprot:Q9LDL9
Length = 251
Score = 134 (52.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 38/112 (33%), Positives = 61/112 (54%)
Query: 305 LPQYNHLPQCVPHVNGMASF------PYYPINMCLQPGQVSANSWPSYGNS-------PS 351
+P+YN+ Q + N F YY + ++P A S+GNS P+
Sbjct: 69 VPEYNNYYQKMSVNNATHYFHGGDHQEYYGFSPEIKPLFRPATGEQSWGNSEGGIQAEPN 128
Query: 352 TEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 403
T+V V+ R+ ++++ +K+ +R F+K I+YV RK LA+RR RVRG+F R
Sbjct: 129 TKVGRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFAR 180
Score = 37 (18.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 16/60 (26%), Positives = 21/60 (35%)
Query: 221 FRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEPPQATYQYYMSGAMN 280
F SSS PD S S N + E F PQ+ + YY ++N
Sbjct: 23 FHGSSSCPDVDSSLSSYLDDCYGSFNTSSNPESIFVPQVFGISDVSVPEYNNYYQKMSVN 82
>TAIR|locus:2172545 [details] [associations]
symbol:COL5 "CONSTANS-like 5" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB018118 HOGENOM:HOG000238833 EMBL:AY057632
EMBL:AY080747 EMBL:AY114006 EMBL:AY088432 IPI:IPI00531436
RefSeq:NP_568863.1 UniGene:At.20797 IntAct:Q9FHH8 STRING:Q9FHH8
PRIDE:Q9FHH8 EnsemblPlants:AT5G57660.1 GeneID:835872
KEGG:ath:AT5G57660 TAIR:At5g57660 eggNOG:NOG321782
InParanoid:Q9FHH8 OMA:YSSYTAT PhylomeDB:Q9FHH8
ProtClustDB:CLSN2917767 Genevestigator:Q9FHH8 GermOnline:AT5G57660
Uniprot:Q9FHH8
Length = 355
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 34/110 (30%), Positives = 60/110 (54%)
Query: 303 SMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQVSANSWPSYGNSPSTEVKMNKVDRR 362
S L + + Q V H +S Y + V+ ++ S ++ + + + +DR
Sbjct: 229 SKLSAFTYPSQSVSHSVSTSSIEYGVVPDGNTNNSVNRSTITS--STTGGDHQASSMDR- 285
Query: 363 EAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDL 412
EA ++++R+KRK R F+K IRY +RK AE RPR++G+F ++ N D+
Sbjct: 286 EARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDI 335
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 24/59 (40%), Positives = 43/59 (72%)
Query: 348 NSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 406
N+ + V+++ +R EA ++++R+KRK R F+K IRY +RK AE RPR++G+F ++ +
Sbjct: 216 NTETPAVQLSPAER-EARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 134 (52.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 348 NSPSTEVKMNKVD-RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 405
+ P T+V REA ++++R+K+K R FDK IRY +RK AE RPR++G+F +++
Sbjct: 263 SGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRI 321
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 22/43 (51%), Positives = 35/43 (81%)
Query: 362 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 404
REA ++++R+K+K R F+K IRY +RK AE+RPR++G+F +K
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 344 PSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 403
P + T +++ +DR EA ++++R+KRK R F+K IRY +RK AE RPRV G+F +
Sbjct: 289 PDPASQMITVTQLSPMDR-EARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAK 347
Query: 404 K 404
+
Sbjct: 348 R 348
>TAIR|locus:2145698 [details] [associations]
symbol:AT5G14370 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002688 EMBL:AY050892 EMBL:AY091296
IPI:IPI00522642 RefSeq:NP_568300.1 UniGene:At.5173
EnsemblPlants:AT5G14370.1 GeneID:831288 KEGG:ath:AT5G14370
TAIR:At5g14370 HOGENOM:HOG000151170 InParanoid:Q949T9 OMA:WVSYSEV
PhylomeDB:Q949T9 ProtClustDB:CLSN2689669 ArrayExpress:Q949T9
Genevestigator:Q949T9 Uniprot:Q949T9
Length = 339
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 23/43 (53%), Positives = 36/43 (83%)
Query: 362 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 404
REA+L+++++KR+ R F K+IRY RK AE+RPRV+G+FV++
Sbjct: 294 REASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
>TAIR|locus:2028421 [details] [associations]
symbol:BBX17 "B-box domain protein 17" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 IPI:IPI00544498
RefSeq:NP_175339.2 UniGene:At.38297 EnsemblPlants:AT1G49130.1
GeneID:841336 KEGG:ath:AT1G49130 OMA:VATKHER Uniprot:F4I1N0
Length = 326
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 350 PSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 404
P E K + +R EA + ++R KRK R F+KKIRY RK A++RPR++G+FVR+
Sbjct: 267 PGIEEKRVRSER-EARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 320
>UNIPROTKB|Q9FDX8 [details] [associations]
symbol:HD1 "Zinc finger protein HD1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0045892 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:AP008212 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009908 GO:GO:0009909 GO:GO:0010229
eggNOG:NOG281690 OMA:RVCEACE GO:GO:0048579 GO:GO:0048576
EMBL:AB041837 EMBL:AB041838 EMBL:AB375859 EMBL:AP003044
EMBL:AP005813 RefSeq:NP_001057378.1 UniGene:Os.1189 STRING:Q9FDX8
EnsemblPlants:LOC_Os06g16370.1 GeneID:4340746 KEGG:osa:4340746
Gramene:Q9FDX8 ProtClustDB:CLSN2696123 GO:GO:0048571 GO:GO:0048572
Uniprot:Q9FDX8
Length = 395
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/87 (35%), Positives = 54/87 (62%)
Query: 328 PINMCLQP-GQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVN 386
P + L P G ++ S PS S + + +DR EA ++++R+K+K R F+K IRY
Sbjct: 296 PNSRILTPAGAINLFSGPSLQMS----LHFSSMDR-EARVLRYREKKKARKFEKTIRYET 350
Query: 387 RKRLAERRPRVRGQFVRKVNGVNVDLN 413
RK AE RPR++G+F ++ + V ++++
Sbjct: 351 RKAYAEARPRIKGRFAKR-SDVQIEVD 376
>UNIPROTKB|Q9FE92 [details] [associations]
symbol:Hd1 "Heading day 1" species:4530 "Oryza sativa"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009909 GO:GO:0010229 GO:GO:0048571 GO:GO:0048572
EMBL:JN402207 EMBL:AB041840 EMBL:AB041842 Gramene:Q9FE92
Genevestigator:Q9FE92 Uniprot:Q9FE92
Length = 407
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/87 (35%), Positives = 54/87 (62%)
Query: 328 PINMCLQP-GQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVN 386
P + L P G ++ S PS S + + +DR EA ++++R+K+K R F+K IRY
Sbjct: 308 PNSRILTPAGAINLFSGPSLQMS----LHFSSMDR-EARVLRYREKKKARKFEKTIRYET 362
Query: 387 RKRLAERRPRVRGQFVRKVNGVNVDLN 413
RK AE RPR++G+F ++ + V ++++
Sbjct: 363 RKAYAEARPRIKGRFAKR-SDVQIEVD 388
>TAIR|locus:2195518 [details] [associations]
symbol:AT1G63820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002684 GenomeReviews:CT485782_GR
HOGENOM:HOG000090374 ProtClustDB:CLSN2681537 EMBL:AK176159
IPI:IPI00542615 RefSeq:NP_176567.2 UniGene:At.50956
EnsemblPlants:AT1G63820.1 GeneID:842685 KEGG:ath:AT1G63820
TAIR:At1g63820 eggNOG:NOG240378 InParanoid:Q67ZF8 OMA:TQRNFTK
PhylomeDB:Q67ZF8 ArrayExpress:Q67ZF8 Genevestigator:Q67ZF8
Uniprot:Q67ZF8
Length = 293
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 50/198 (25%), Positives = 80/198 (40%)
Query: 206 HENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTRNE 265
H++ +E+++ SSS P S + T FP F++ + + N
Sbjct: 50 HQSLSFFESFTPTTHHILSSSPPISQLQTLTLTHTNSFPNFSGFENFDTVKTEQL-LFNS 108
Query: 266 PPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNHSMLPQYNHLPQCVPHVNGMASFP 325
P A + S NQ +L S + ++ + + L G S+
Sbjct: 109 PFDAPFMEDSSNFQNQNLLNSPEDSFFSDHMRRVYSTGDLQNLGR------DFTGQRSYS 162
Query: 326 YYPINMCLQPGQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYV 385
P+ P V + G+ S V + R+ + K+R KR +R F K I+Y
Sbjct: 163 S-PLAAESSPTTVFS------GDEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYA 215
Query: 386 NRKRLAERRPRVRGQFVR 403
RK LA+ RPRVRG+F R
Sbjct: 216 CRKTLADNRPRVRGRFAR 233
>TAIR|locus:2175564 [details] [associations]
symbol:CIA2 "chloroplast import apparatus 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEP] [GO:0045036 "protein targeting to chloroplast"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR010402
Pfam:PF06203 PROSITE:PS51017 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 EMBL:AB023042 EMBL:AF359387
EMBL:AF372929 EMBL:AY078036 EMBL:AK316813 EMBL:AK221521
IPI:IPI00517190 IPI:IPI00544089 IPI:IPI00656805
RefSeq:NP_001032087.1 RefSeq:NP_568852.2 RefSeq:NP_851201.1
UniGene:At.9681 IntAct:Q9LU68 STRING:Q9LU68 PaxDb:Q9LU68
PRIDE:Q9LU68 EnsemblPlants:AT5G57180.2 GeneID:835824
KEGG:ath:AT5G57180 GeneFarm:2245 TAIR:At5g57180 eggNOG:NOG245310
HOGENOM:HOG000238782 InParanoid:Q9LU68 OMA:YLRSLMV PhylomeDB:Q9LU68
ProtClustDB:CLSN2680548 Genevestigator:Q9LU68 GO:GO:0045036
Uniprot:Q9LU68
Length = 435
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 23/45 (51%), Positives = 37/45 (82%)
Query: 362 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 406
REA+++++++KR+ R F KKIRY RK A++RPR++G+FVR+ N
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRPN 427
>TAIR|locus:2177911 [details] [associations]
symbol:AT5G41380 "AT5G41380" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AY800647 EMBL:AY924846
IPI:IPI00519705 RefSeq:NP_198954.2 UniGene:At.51252
EnsemblPlants:AT5G41380.1 GeneID:834140 KEGG:ath:AT5G41380
TAIR:At5g41380 HOGENOM:HOG000090374 InParanoid:Q5Q0A4 OMA:VVEIPNI
PhylomeDB:Q5Q0A4 ProtClustDB:CLSN2681537 Genevestigator:Q5Q0A4
Uniprot:Q5Q0A4
Length = 307
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 55/202 (27%), Positives = 87/202 (43%)
Query: 224 SSSVPDSL--SMERSSTPPTD-FPQNRNF------KDEKFFQPQMPPTRNEPPQATYQYY 274
SSS P L ++ S PT +P +F K EKFF +T +
Sbjct: 65 SSSPPSDLLGTLSLSQHIPTGLYPNFSDFQISDAVKTEKFFDGHNQAATMARSYSTIEN- 123
Query: 275 MSGAMNQVMLPSSSAQMYQKNLH---ELQNHSMLPQYNHL--PQCVPHVNGMAS-FPYYP 328
SG Q S+S + Q + + + S L YN+L P+ + M +
Sbjct: 124 -SGRYMQRSFSSNSVEGKQTQVPFNIPMMDSSNL-SYNNLSSPENAFFSSQMRRVYSTGD 181
Query: 329 INMCLQPGQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRK 388
+ ++ + S NS + + +V + R+ + K+R KR +R F K I+Y RK
Sbjct: 182 LQNNMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRK 241
Query: 389 RLAERRPRVRGQFVRKVNGVNV 410
LA+ RPR+RG+F R V +
Sbjct: 242 TLADSRPRIRGRFARNDEVVEI 263
>TAIR|locus:2017582 [details] [associations]
symbol:ZML2 "ZIM-LIKE 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000679 InterPro:IPR010402
InterPro:IPR013088 Pfam:PF00320 Pfam:PF06203 PROSITE:PS00344
PROSITE:PS50114 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 EMBL:AC025294
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 EMBL:AC024261 eggNOG:NOG303027 HOGENOM:HOG000238783
ProtClustDB:CLSN2688624 InterPro:IPR010399 Pfam:PF06200
PROSITE:PS51320 EMBL:AB119061 EMBL:AY045906 EMBL:AY150395
IPI:IPI00526986 PIR:F96554 RefSeq:NP_564593.1 RefSeq:NP_974002.1
UniGene:At.26180 UniGene:At.37784 ProteinModelPortal:Q8H1G0
SMR:Q8H1G0 IntAct:Q8H1G0 PaxDb:Q8H1G0 EnsemblPlants:AT1G51600.1
EnsemblPlants:AT1G51600.2 GeneID:841585 KEGG:ath:AT1G51600
GeneFarm:3915 TAIR:At1g51600 InParanoid:Q8H1G0 OMA:NNDEAAS
PhylomeDB:Q8H1G0 Genevestigator:Q8H1G0 GermOnline:AT1G51600
Uniprot:Q8H1G0
Length = 302
Score = 124 (48.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 335 PGQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERR 394
PG S + + P T + + + +R A+L++FR+KRK R FDKKIRY RK +A R
Sbjct: 121 PGLGSPHQNNRVSSLPGTPQRFS-IPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRM 179
Query: 395 PRVRGQF 401
R +GQF
Sbjct: 180 QRNKGQF 186
>TAIR|locus:2031581 [details] [associations]
symbol:BBX16 "B-box domain protein 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009641 "shade avoidance" evidence=IMP] [GO:0010223 "secondary
shoot formation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016662 HOGENOM:HOG000240360 EMBL:BT015740
EMBL:BT020183 IPI:IPI00516267 PIR:C96766 RefSeq:NP_177528.1
UniGene:At.34943 IntAct:Q9C9A9 STRING:Q9C9A9
EnsemblPlants:AT1G73870.1 GeneID:843723 KEGG:ath:AT1G73870
TAIR:At1g73870 eggNOG:NOG320376 InParanoid:Q9C9A9 OMA:EAKCENG
PhylomeDB:Q9C9A9 ProtClustDB:CLSN2914358 Genevestigator:Q9C9A9
GermOnline:AT1G73870 Uniprot:Q9C9A9
Length = 392
Score = 126 (49.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 22/45 (48%), Positives = 36/45 (80%)
Query: 362 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 406
REA ++++++KR+ R F KKIRY RK AE+RPR++G+FV++ +
Sbjct: 345 REARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTS 389
>TAIR|locus:2031180 [details] [associations]
symbol:BBX15 "B-box domain protein 15" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281 GO:GO:0016020
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AY093174
IPI:IPI00533844 PIR:E86384 RefSeq:NP_173915.2 UniGene:At.27494
EnsemblPlants:AT1G25440.1 GeneID:839130 KEGG:ath:AT1G25440
TAIR:At1g25440 eggNOG:NOG293508 HOGENOM:HOG000240360
InParanoid:Q8RWD0 OMA:SDEISHE PhylomeDB:Q8RWD0
ProtClustDB:CLSN2689085 Genevestigator:Q8RWD0 Uniprot:Q8RWD0
Length = 417
Score = 124 (48.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 23/45 (51%), Positives = 35/45 (77%)
Query: 362 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 406
REA + ++R+KR+ R F KKIRY RK AE+RPR++G+FV++ +
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRAS 405
>TAIR|locus:2201277 [details] [associations]
symbol:BBX14 "B-box domain protein 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 HOGENOM:HOG000240360 ProtClustDB:CLSN2689085
EMBL:AC011915 EMBL:AY054625 EMBL:AY081541 EMBL:AY084427
IPI:IPI00518479 PIR:D96709 RefSeq:NP_564932.1 UniGene:At.23999
UniGene:At.69467 UniGene:At.74856 IntAct:Q8LG76 STRING:Q8LG76
PRIDE:Q8LG76 EnsemblPlants:AT1G68520.1 GeneID:843181
KEGG:ath:AT1G68520 TAIR:At1g68520 eggNOG:NOG257442
InParanoid:Q8LG76 OMA:AFLCHAC PhylomeDB:Q8LG76
Genevestigator:Q8LG76 GermOnline:AT1G68520 Uniprot:Q8LG76
Length = 406
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 23/43 (53%), Positives = 34/43 (79%)
Query: 362 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 404
REA + ++R+KR+ R F KKIRY RK AE+RPR++G+FV++
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 399
>TAIR|locus:2043288 [details] [associations]
symbol:AT2G47890 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC005309 EMBL:AC006072 EMBL:BT023413 IPI:IPI00543399
PIR:G84920 RefSeq:NP_182310.1 UniGene:At.12948 STRING:O82256
EnsemblPlants:AT2G47890.1 GeneID:819401 KEGG:ath:AT2G47890
TAIR:At2g47890 eggNOG:NOG271369 HOGENOM:HOG000240051
InParanoid:O82256 OMA:CSRHARA PhylomeDB:O82256
ProtClustDB:CLSN2683730 Genevestigator:O82256 Uniprot:O82256
Length = 332
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 47/184 (25%), Positives = 87/184 (47%)
Query: 236 SSTPPTDFPQNRN-----FKDEKFFQPQMPPTRNEP-------PQAT----YQYYMSGAM 279
+ PP P+NR+ +KDE Q + +R+EP P A +Q+
Sbjct: 150 TDVPP--LPKNRHATCGKYKDEMIRQLR-GLSRSEPGCLKFETPDAEIDAGFQFLAPDLF 206
Query: 280 NQVMLPSSSAQMYQKNLHELQNHSMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQVS 339
+ L S Q++ + S+L + + +V+ +S P++ CL +
Sbjct: 207 STCELESGLKWFDQQDHEDFPYCSLLKNLSESDEKPENVDRESSV-MVPVSGCLNRCEEE 265
Query: 340 ANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRG 399
P ++ S ++N ++R +AL ++++K+K R ++K IRY +RK AE R R+RG
Sbjct: 266 TVMVPVITSTRSMTHEINSLERN-SALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRG 324
Query: 400 QFVR 403
+F +
Sbjct: 325 RFAK 328
>TAIR|locus:2051099 [details] [associations]
symbol:AT2G33350 "AT2G33350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 ProtClustDB:CLSN2680683 EMBL:AY600556 IPI:IPI00520380
RefSeq:NP_180893.2 UniGene:At.50819 EnsemblPlants:AT2G33350.1
GeneID:817898 KEGG:ath:AT2G33350 TAIR:At2g33350 InParanoid:Q6E267
OMA:GSEINKP PhylomeDB:Q6E267 Genevestigator:Q6E267 Uniprot:Q6E267
Length = 410
Score = 120 (47.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 347 GNSPSTEVKMNKV--DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 403
G ST K+ K+ ++R+ + ++ +KR ER F+KKI+Y RK LA+ RPRVRG+F +
Sbjct: 294 GLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK 352
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 213 ENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRN 248
E ++Q + S+S++ + S+T T +N N
Sbjct: 38 ETFNQSSEVTSTSNILEKSGSFHSNTNTTTTTENSN 73
>TAIR|locus:2164718 [details] [associations]
symbol:BBX8 "B-box domain protein 8" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005886 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB023039 EMBL:AY039957 EMBL:AY142607
IPI:IPI00527282 RefSeq:NP_199636.1 UniGene:At.7080
ProteinModelPortal:Q9LUA9 IntAct:Q9LUA9 STRING:Q9LUA9
EnsemblPlants:AT5G48250.1 GeneID:834878 KEGG:ath:AT5G48250
TAIR:At5g48250 eggNOG:NOG248444 HOGENOM:HOG000116529
InParanoid:Q9LUA9 OMA:ESACEQG PhylomeDB:Q9LUA9
ProtClustDB:CLSN2684850 Genevestigator:Q9LUA9 GermOnline:AT5G48250
Uniprot:Q9LUA9
Length = 373
Score = 116 (45.9 bits), Expect = 0.00056, P = 0.00056
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 362 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVD 411
R A++++++K+K R FDK++RYV+RK A+ R RV+G+FV+ + D
Sbjct: 316 RNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEAYDYD 365
>TAIR|locus:2018344 [details] [associations]
symbol:AT1G04500 "AT1G04500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:DQ446226 EMBL:AB493431
IPI:IPI00533670 RefSeq:NP_171944.2 UniGene:At.42446
EnsemblPlants:AT1G04500.1 GeneID:839510 KEGG:ath:AT1G04500
TAIR:At1g04500 HOGENOM:HOG000239716 InParanoid:Q1PFY7 OMA:SPSCSFL
PhylomeDB:Q1PFY7 ProtClustDB:CLSN2680683 Genevestigator:Q1PFY7
Uniprot:Q1PFY7
Length = 386
Score = 115 (45.5 bits), Expect = 0.00077, P = 0.00077
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 348 NSPSTEVKMNKV--DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 403
+ PS K+ K+ ++R+ + ++ +KR ER F KKI+Y RK LA+ RPRVRG+F +
Sbjct: 273 DDPSFN-KVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 329
>TAIR|locus:505006360 [details] [associations]
symbol:ZML1 "ZIM-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000679 InterPro:IPR010402
InterPro:IPR013088 InterPro:IPR018467 Pfam:PF00320 Pfam:PF09425
PROSITE:PS00344 PROSITE:PS50114 PROSITE:PS51017 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AB023045
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 EMBL:AB119060 EMBL:AY042817 EMBL:AY064628
EMBL:AY085109 EMBL:AK118169 IPI:IPI00528960 IPI:IPI00530061
RefSeq:NP_566676.1 RefSeq:NP_850618.1 UniGene:At.20286
ProteinModelPortal:Q8GXL7 SMR:Q8GXL7 IntAct:Q8GXL7
EnsemblPlants:AT3G21175.1 GeneID:821670 KEGG:ath:AT3G21175
GeneFarm:3917 TAIR:At3g21175 eggNOG:NOG303027 HOGENOM:HOG000238783
InParanoid:Q8GXL7 OMA:NGRMHIG PhylomeDB:Q8GXL7
ProtClustDB:CLSN2688624 Genevestigator:Q8GXL7 GermOnline:AT3G21175
InterPro:IPR010399 Pfam:PF06200 SMART:SM00979 PROSITE:PS51320
Uniprot:Q8GXL7
Length = 297
Score = 113 (44.8 bits), Expect = 0.00079, P = 0.00079
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 359 VDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQF 401
V +R A+L++FR+KRK R FDK IRY RK +A R R +GQF
Sbjct: 140 VPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQF 182
>TAIR|locus:2129860 [details] [associations]
symbol:BBX9 "B-box domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006863 "purine
nucleobase transport" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97338 EMBL:AL161541 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 HOGENOM:HOG000116529 IPI:IPI00529586
PIR:F71416 RefSeq:NP_193260.2 UniGene:At.54335
EnsemblPlants:AT4G15250.1 GeneID:827191 KEGG:ath:AT4G15250
TAIR:At4g15250 eggNOG:NOG321931 InParanoid:O23379 OMA:YQDCGIS
PhylomeDB:O23379 ProtClustDB:CLSN2915042 Genevestigator:O23379
GermOnline:AT4G15250 Uniprot:O23379
Length = 330
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00097
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 284 LPSSSAQMYQKNLHELQNHSMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQVSANSW 343
L ++ Y+ + E +N+ LP +P ++G P ++M G+ +A +
Sbjct: 195 LDNTKCYEYEDSFKE-ENNIGLPSL-----LLPTLSGNV-VPNMSLSMSNLTGESNATDY 247
Query: 344 ------PSY--GNSP---STEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAE 392
P + G+SP + EV N R EA +++QK+ +R F K+IRY +RK A+
Sbjct: 248 QDCGISPGFLIGDSPWESNVEVSFNPKLRDEAKK-RYKQKKSKRMFGKQIRYASRKARAD 306
Query: 393 RRPRVRGQFVR 403
R RV+G+FV+
Sbjct: 307 TRKRVKGRFVK 317
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 445 389 0.00093 117 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 614 (65 KB)
Total size of DFA: 267 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.87u 0.36s 34.23t Elapsed: 00:00:01
Total cpu time: 33.88u 0.36s 34.24t Elapsed: 00:00:01
Start: Fri May 10 11:18:38 2013 End: Fri May 10 11:18:39 2013