BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013330
(445 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 607 bits (1566), Expect = e-174, Method: Compositional matrix adjust.
Identities = 312/478 (65%), Positives = 347/478 (72%), Gaps = 39/478 (8%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQ 60
MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESK+YRILQ
Sbjct: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQ 60
Query: 61 GGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQM-------- 112
GGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQM
Sbjct: 61 GGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 120
Query: 113 ------------------------VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 180
Query: 149 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 208
S+NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT V+TSIEAL
Sbjct: 181 SVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL 240
Query: 209 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQL 268
CRGYPTEFASYFHYCRSLRFDDKPDY+YLKR+FRDLFIREGFQFDYVFDWTILKYQQSQ+
Sbjct: 241 CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQI 300
Query: 269 ATPPARALVPGAGTSG-APPAIASGDRQTGGGEEGRPAGLXXXXXXXXXXXGPVINSGSF 327
A+ P RA+ GAG SG APPA+ + DRQ+ G +EGR +G P+ + G+
Sbjct: 301 ASAPPRAVGHGAGPSGLAPPALQN-DRQS-GVDEGRTSGWSSMDRRRAPP--PIASVGTL 356
Query: 328 SKQKSPVVNEPTMTKDTMLXXXXXXXXXXXXXXXXXXXXXXXXXXFVGSETEPQRSRTTE 387
+KQK+PV N+ + +K+ ++ +EP R+R T+
Sbjct: 357 AKQKAPVGNDASFSKEPVISASNFLGRSSGSSRRPAVSSSRDVMPI--DTSEPSRTRATD 414
Query: 388 ASPGAMHXXXXXXXXXXXXXXDPKRSSSGRNTTHIKTYETTLKGIESLHFDTDERVHY 445
ASPGA +PK SSS R+++++K YE+ LKGIE L+FD DERV Y
Sbjct: 415 ASPGAFRRTSGPQKSSPVNSAEPKHSSSARHSSNVKNYESALKGIEGLNFDGDERVQY 472
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/298 (67%), Positives = 229/298 (76%), Gaps = 32/298 (10%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQ 60
ME RVGN++RLGRKIGSGSFG+IYLGT+I EEVAIKLE VKTKHPQL ESK+Y+++Q
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 61 GGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQM-------- 112
GG GIP +RW G EGDYNV+VM+LLGPSLEDLFNFCSRK SLKTVL+LADQM
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 113 ------------------------VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
VYIIDFGLAKKYRD THQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 149 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 208
S+NTHLGIEQSRRDDLESLGYVLMYF GSLPWQGLKA T +ST IE L
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 209 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQS 266
C+GYP+EFA+Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK+ S
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 298
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/294 (68%), Positives = 227/294 (77%), Gaps = 32/294 (10%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQ 60
ME RVGN++RLGRKIGSGSFG+IYLGT+I EEVAIKLE VKTKHPQL ESK+Y+++Q
Sbjct: 3 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 62
Query: 61 GGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQM-------- 112
GG GIP +RW G EGDYNV+VM+LLGPSLEDLFNFCSRK SLKTVL+LADQM
Sbjct: 63 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 122
Query: 113 ------------------------VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
VYIIDFGLAKKYRD THQHIPYRENKNLTGTARYA
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182
Query: 149 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 208
S+NTHLGIEQSRRDDLESLGYVLMYF GSLPWQGLKA T +ST IE L
Sbjct: 183 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 242
Query: 209 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILK 262
C+GYP+EFA+Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK
Sbjct: 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 296
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/294 (67%), Positives = 227/294 (77%), Gaps = 32/294 (10%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQ 60
ME RVGNK+RLGRKIGSGSFG+IYLG NI + EEVAIKLE VKTKHPQL ESK Y+++Q
Sbjct: 3 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 62
Query: 61 GGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQM-------- 112
GG GIP+++W G EGDYNV+VM+LLGPSLEDLFNFCSRK SLKTVL+LADQM
Sbjct: 63 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 122
Query: 113 ------------------------VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
VYIIDFGLAKKYRD THQHIPYRENKNLTGTARYA
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182
Query: 149 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 208
S+NTHLGIEQSRRDDLESLGYVLMYF GSLPWQGLKA T +ST IE L
Sbjct: 183 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 242
Query: 209 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILK 262
C+GYP+EF++Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK
Sbjct: 243 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 296
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 297 bits (761), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 198/321 (61%), Gaps = 48/321 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTG 64
VG FR+G+KIG G+FGE+ LG N+ TNE VAIKLE +K++ PQL E + Y+ L G G
Sbjct: 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDG 66
Query: 65 IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLA--------------- 109
IP V +FG G YN +V++LLGPSLEDLF+ C R SLKTVLM+A
Sbjct: 67 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126
Query: 110 -------------------DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
Q+++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY S+
Sbjct: 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSI 186
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 210
NTHLG EQSRRDDLE+LG++ MYFLRGSLPWQGLKA T +T IE LC
Sbjct: 187 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 246
Query: 211 GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAT 270
+P E A+Y Y R L F +KPDY YL+++F DLF R+G+ FDY +DW QL T
Sbjct: 247 NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI-----GKQLPT 300
Query: 271 PPARALVPGAGTSGAPPAIAS 291
P G PA++S
Sbjct: 301 P--------VGAVQQDPALSS 313
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 297 bits (760), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 148/289 (51%), Positives = 186/289 (64%), Gaps = 34/289 (11%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTG 64
+G FR+G+KIG G+FGE+ LG N+ TNE VAIKLE +K++ PQL E + Y+ L G
Sbjct: 2 MGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEG 61
Query: 65 IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMV----------- 113
+P V +FG G YN +V++LLGPSLEDLF+ C R +LKTVLM+A Q++
Sbjct: 62 VPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSL 121
Query: 114 -----------------------YIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
+IIDFGLAK+Y D T +HIPYRE+K+LTGTARY S+
Sbjct: 122 IYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSI 181
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 210
NTHLG EQSRRDDLE+LG++ MYFLRGSLPWQGLKA T +T IE LC
Sbjct: 182 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 241
Query: 211 GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWT 259
+P E A+Y Y R L F +KPDY YL+++F DLF R GF FDY +DW
Sbjct: 242 NFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVFDYEYDWA 290
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/322 (49%), Positives = 197/322 (61%), Gaps = 48/322 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTG 64
VG FR+G+KIG G+FGE+ LG N+ TNE VAIKLE +K++ PQL E + Y+ L G G
Sbjct: 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDG 66
Query: 65 IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLA--------------- 109
IP V +FG G YN +V++LLGPSLEDLF+ C R SLKTVLM+A
Sbjct: 67 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126
Query: 110 -------------------DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
Q+++IIDF LAK+Y D T +HIPYRE+K+LTGTARY S+
Sbjct: 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSI 186
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 210
NTHLG EQSRRDDLE+LG++ MYFLRGSLPWQGLKA T +T IE LC
Sbjct: 187 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 246
Query: 211 GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAT 270
+P E A+Y Y R L F +KPDY YL+++F DLF R+G+ FDY +DW QL T
Sbjct: 247 NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI-----GKQLPT 300
Query: 271 PPARALVPGAGTSGAPPAIASG 292
P G PA++S
Sbjct: 301 P--------VGAVQQDPALSSN 314
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/321 (49%), Positives = 197/321 (61%), Gaps = 48/321 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTG 64
VG FR+G+KIG G+FGE+ LG N+ TNE VAIKLE +K++ PQL E + Y+ L G G
Sbjct: 28 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDG 87
Query: 65 IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLA--------------- 109
IP V +FG G YN +V++LLGPSLEDLF+ C R SLKTVLM+A
Sbjct: 88 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 147
Query: 110 -------------------DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
Q+++IIDF LAK+Y D T +HIPYRE+K+LTGTARY S+
Sbjct: 148 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSI 207
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 210
NTHLG EQSRRDDLE+LG++ MYFLRGSLPWQGLKA T +T IE LC
Sbjct: 208 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 267
Query: 211 GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAT 270
+P E A+Y Y R L F +KPDY YL+++F DLF R+G+ FDY +DW QL T
Sbjct: 268 NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI-----GKQLPT 321
Query: 271 PPARALVPGAGTSGAPPAIAS 291
P G PA++S
Sbjct: 322 P--------VGAVQQDPALSS 334
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/285 (51%), Positives = 185/285 (64%), Gaps = 35/285 (12%)
Query: 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRIL-QGGTGIPNV 68
R+G+KIG G+FGE+ LG N+ TNE VAIKLE +K++ PQL E + Y+ L G G+P V
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQV 62
Query: 69 RWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQM---------------- 112
+FG G YN +V++LLGPSLEDLF+ C R +LKTVLM+A Q+
Sbjct: 63 YYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRD 122
Query: 113 ------------------VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHL 154
++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY S+NTHL
Sbjct: 123 VKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHL 182
Query: 155 GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGYPT 214
G EQSRRDDLE+LG++ MYFLRGSLPWQGLKA T +T IEALC +P
Sbjct: 183 GKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALCENFPE 242
Query: 215 EFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWT 259
E A+Y Y R L F +KPDY YL+ +F DLF ++G+ FDY +DW
Sbjct: 243 EMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKKGYTFDYAYDWV 287
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 287 bits (734), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 147/291 (50%), Positives = 180/291 (61%), Gaps = 34/291 (11%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTG 64
VG +++GR+IG GSFG I+ GTN+ N++VAIK E ++ PQL E + Y++L G TG
Sbjct: 7 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTG 66
Query: 65 IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQM------------ 112
IPNV +FG EG +NVLV+DLLGPSLEDL + C RK S+KTV M A QM
Sbjct: 67 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 126
Query: 113 ----------------------VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
+Y++DFG+ K YRD T QHIPYRE KNL+GTARY S+
Sbjct: 127 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 186
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 210
NTHLG EQSRRDDLE+LG+V MYFLRGSLPWQGLKA T ST + LC
Sbjct: 187 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA 246
Query: 211 GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTIL 261
G+P EF Y HY R+L FD PDY YL+ +F + R D FDW +L
Sbjct: 247 GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLL 297
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 287 bits (734), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 147/291 (50%), Positives = 180/291 (61%), Gaps = 34/291 (11%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTG 64
VG +++GR+IG GSFG I+ GTN+ N++VAIK E ++ PQL E + Y++L G TG
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTG 67
Query: 65 IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQM------------ 112
IPNV +FG EG +NVLV+DLLGPSLEDL + C RK S+KTV M A QM
Sbjct: 68 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 127
Query: 113 ----------------------VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
+Y++DFG+ K YRD T QHIPYRE KNL+GTARY S+
Sbjct: 128 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 187
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 210
NTHLG EQSRRDDLE+LG+V MYFLRGSLPWQGLKA T ST + LC
Sbjct: 188 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA 247
Query: 211 GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTIL 261
G+P EF Y HY R+L FD PDY YL+ +F + R D FDW +L
Sbjct: 248 GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLL 298
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 61/292 (20%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----LLYESKLYR------ 57
++++G IG G FG IYL ++ ++E V V P L E K Y+
Sbjct: 36 EWKVGLPIGQGGFGCIYLA-DMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPE 94
Query: 58 ILQGGTGIPNVRWFGVEG------------DYNVLVMDLLGPSLEDLFNFCSRKLSLKTV 105
+Q +++ GV Y ++MD G L+ ++ +++ S KTV
Sbjct: 95 QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTV 154
Query: 106 LMLA--------------------------------DQMVYIIDFGLAKKYRDTSTHQHI 133
L L+ DQ VY++D+GLA +Y H+
Sbjct: 155 LQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ-VYLVDYGLAYRYCPEGVHKEY 213
Query: 134 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ-GLKAGTXXXX 192
+ GT + S++ H G+ SRR DLE LGY ++ +L G LPW+ LK
Sbjct: 214 KEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRD 273
Query: 193 XXXXXXXXVSTSIEALC---RGYPTEFASYFHYCRSLRFDDKPDYAYLKRIF 241
+++ ++ C + P E A Y + L + +KP Y L+ I
Sbjct: 274 SKIRYRENIASLMDK-CFPEKNKPGEIAKYMETVKLLDYTEKPLYENLRDIL 324
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 59/291 (20%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----LLYESKLYR------ 57
++++G IG G FG IYL ++ ++E V V P L E K Y+
Sbjct: 36 EWKVGLPIGQGGFGCIYLA-DMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPE 94
Query: 58 ILQGGTGIPNVRWFGVEG------------DYNVLVMDLLGPSLEDLFNFCSRKLSLKTV 105
+Q +++ GV Y ++MD G L+ ++ +++ S KTV
Sbjct: 95 QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTV 154
Query: 106 LMLA--------------------------------DQMVYIIDFGLAKKYRDTSTHQHI 133
L L+ DQ VY++D+GLA +Y H+
Sbjct: 155 LQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ-VYLVDYGLAYRYCPEGVHKEY 213
Query: 134 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ-GLKAGTXXXX 192
+ GT + S++ H G+ SRR DLE LGY ++ +L G LPW+ LK
Sbjct: 214 KEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRD 273
Query: 193 XXXXXXXXVSTSIEALC--RGYPTEFASYFHYCRSLRFDDKPDYAYLKRIF 241
+++ ++ + P E A Y + L + +KP Y L+ I
Sbjct: 274 SKIRYRENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLYENLRDIL 324
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 121/291 (41%), Gaps = 58/291 (19%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHPQLLYESKLY-RILQGGT 63
GN++ LG+KIGSG FG IYL E+ A + V+ ++ L E K Y R+ +
Sbjct: 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDC 95
Query: 64 -------------GIPNVRWFGVEG----DYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
GIP G+ Y +VM+ LG L+ + + + TVL
Sbjct: 96 IKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKI-SGQNGTFKKSTVL 154
Query: 107 MLADQM-------------------------------VYIIDFGLAKKYRDTSTHQHIPY 135
L +M VY+ D+GL+ +Y H+ Y
Sbjct: 155 QLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQ--Y 212
Query: 136 REN--KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW-QGLKAGTXXXX 192
+EN K GT + S++ H G+ SRR D+E LGY ++ +L G LPW Q LK
Sbjct: 213 QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272
Query: 193 XXXXXXXXVSTSI--EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIF 241
+ S+ A E A + SL +D+KP+Y LK+I
Sbjct: 273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL 323
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 116/289 (40%), Gaps = 57/289 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----LLYESKLYR------I 58
+++G IG G FG IYL ++ ++E V V P L E K Y+
Sbjct: 37 WKVGLPIGQGGFGCIYLA-DMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQ 95
Query: 59 LQGGTGIPNVRWFGVEG------------DYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
+Q +++ GV Y ++MD G L+ ++ +++ S KTVL
Sbjct: 96 IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVL 155
Query: 107 MLADQM-------------------------------VYIIDFGLAKKYRDTSTHQHIPY 135
L+ ++ VY++D+GLA +Y H+
Sbjct: 156 QLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAA 215
Query: 136 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ-GLKAGTXXXXXX 194
+ GT + S++ H G+ SRR DLE LGY ++ +L G LPW+ LK
Sbjct: 216 DPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSK 275
Query: 195 XXXXXXVSTSIEAL--CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIF 241
+++ ++ P E A Y + L + +KP Y L+ I
Sbjct: 276 IRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDIL 324
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 84/218 (38%), Gaps = 36/218 (16%)
Query: 64 GIPNVRWFGVEGD-YNVLVMDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMVYIIDF--- 118
IP FGV D Y LV+ LG SL+ + + LS ++VL +A +++ ++F
Sbjct: 118 AIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE 177
Query: 119 --------------------------GLAKKYRDTSTHQHIPYRENKNL--TGTARYASM 150
G +R + +H+ Y E G + SM
Sbjct: 178 NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISM 237
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 210
+ H G SRR DL+SLGY ++ +L G LPW T C
Sbjct: 238 DLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCG 297
Query: 211 GY--PTE-FASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
+ P+E Y +L +++KP YA L+ L
Sbjct: 298 HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 47/219 (21%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-------------------ENVKT- 44
+ +++ LG +G G E++L +++ + +VA+K+ +N
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 45 KHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLL---GP-----SLEDLFNFC 96
HP ++ +Y + T + + +E V + D++ GP ++E + + C
Sbjct: 70 NHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 97 S------------RKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 144
R + +L+ A V ++DFG+A+ D+ + + GT
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNS----VXQTAAVIGT 182
Query: 145 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
A+Y S G R D+ SLG VL L G P+ G
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 47/219 (21%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-------------------ENVKT- 44
+ +++ LG +G G E++L +++ + +VA+K+ +N
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 45 KHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLL---GP-----SLEDLFNFC 96
HP ++ +Y + T + + +E V + D++ GP ++E + + C
Sbjct: 70 NHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 97 S------------RKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 144
R + +++ A V ++DFG+A+ D+ + + GT
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS----VTQTAAVIGT 182
Query: 145 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
A+Y S G R D+ SLG VL L G P+ G
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 47/219 (21%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-------------------ENVKT- 44
+ +++ LG +G G E++L +++ + +VA+K+ +N
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 45 KHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLL---GP-----SLEDLFNFC 96
HP ++ +Y + T + + +E V + D++ GP ++E + + C
Sbjct: 70 NHPAIV---AVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 97 S------------RKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 144
R + +++ A V ++DFG+A+ D+ + + GT
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS----VTQTAAVIGT 182
Query: 145 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
A+Y S G R D+ SLG VL L G P+ G
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 47/219 (21%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-------------------ENVKT- 44
+ +++ LG +G G E++L +++ + +VA+K+ +N
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 45 KHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLL---GP-----SLEDLFNFC 96
HP ++ +Y + T + + +E V + D++ GP ++E + + C
Sbjct: 70 NHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 97 S------------RKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 144
R + +++ A V ++DFG+A+ D+ + + GT
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS----VTQTAAVIGT 182
Query: 145 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
A+Y S G R D+ SLG VL L G P+ G
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 47/219 (21%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-------------------ENVKT- 44
+ +++ LG +G G E++L +++ + +VA+K+ +N
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 45 KHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLL---GP-----SLEDLFNFC 96
HP ++ +Y + T + + +E V + D++ GP ++E + + C
Sbjct: 70 NHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 97 S------------RKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 144
R + +++ A V ++DFG+A+ D+ + + GT
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS----VTQTAAVIGT 182
Query: 145 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
A+Y S G R D+ SLG VL L G P+ G
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 81/210 (38%), Gaps = 47/210 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--------------------KHPQ 48
F++G +G GSF +Y +I T EVAIK+ + K KHP
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 49 LLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLED-------------LF-- 93
+L +LY + + V G+ N + + + P E+ L+
Sbjct: 73 IL---ELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 94 --NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMN 151
R L+L +L+ + + I DFGLA + + +P+ ++ L GT Y S
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK-------MPHEKHYTLCGTPNYISPE 182
Query: 152 THLGIEQSRRDDLESLGYVLMYFLRGSLPW 181
D+ SLG + L G P+
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 47/219 (21%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-------------------ENVKT- 44
+ +++ LG +G G E++L +++ + +VA+K+ +N
Sbjct: 27 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 86
Query: 45 KHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLL---GP-----SLEDLFNFC 96
HP ++ +Y + T + + +E V + D++ GP ++E + + C
Sbjct: 87 NHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 143
Query: 97 S------------RKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 144
R + +++ A V ++DFG+A+ D+ + + GT
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS----VTQTAAVIGT 199
Query: 145 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
A+Y S G R D+ SLG VL L G P+ G
Sbjct: 200 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLEN-VKTKHP-QLLYESKLYRIL 59
P++ N F++ KIG G+F +YL T +Q E I L++ + T HP ++ E + +
Sbjct: 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVA 76
Query: 60 QGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMVYIIDF 118
G + V++ + D+ V+ M L S D+ N S + + +L L + I F
Sbjct: 77 GGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQF 136
Query: 119 GLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRD-DLESLGYV 170
G+ +RD + R K +YA ++ G+ Q D +E L +V
Sbjct: 137 GIV--HRDVKPSNFLYNRRLK------KYALVD--FGLAQGTHDTKIELLKFV 179
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 50/219 (22%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKLYR 57
+P +GN +RL + IG G+F ++ L +I T EVAIK+ + +P +L E ++ +
Sbjct: 8 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 66
Query: 58 ILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFN---------------------- 94
IL PN V+ F V L + + S ++F+
Sbjct: 67 ILNH----PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 122
Query: 95 ---FCSRK------LSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTA 145
+C +K L + +L+ AD + I DFG + ++ G+
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD--------TFCGSP 174
Query: 146 RYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 183
YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 175 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 50/219 (22%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKLYR 57
+P +GN +RL + IG G+F ++ L ++ T EVA+K+ + +P +L E ++ +
Sbjct: 11 QPHIGN-YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 58 ILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFN---------------------- 94
IL PN V+ F V L + + S ++F+
Sbjct: 70 ILNH----PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 125
Query: 95 ---FCSRK------LSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTA 145
+C +K L + +L+ D + I DFG + ++ + G+
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLD--------TFCGSP 177
Query: 146 RYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 183
YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 50/219 (22%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKLYR 57
+P +GN +RL + IG G+F ++ L +I T EVAIK+ + +P +L E ++ +
Sbjct: 11 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 58 ILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFN---------------------- 94
IL PN V+ F V L + + S ++F+
Sbjct: 70 ILNH----PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125
Query: 95 ---FCSRK------LSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTA 145
+C +K L + +L+ AD + I DFG + ++ G
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD--------AFCGAP 177
Query: 146 RYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 183
YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 39/215 (18%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV--KTKHPQL-LYESKLYRILQ- 60
+ ++++ K+G G +YL + N +VAIK + + K L +E +++ Q
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 61 GGTGIPNVRWFGVEGDYNVLVMDLL-GPSLED------------LFNFCS---------- 97
I ++ E D LVM+ + GP+L + NF +
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH 128
Query: 98 ------RKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMN 151
R + + +L+ +++ + I DFG+AK +TS Q ++ GT +Y S
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ------TNHVLGTVQYFSPE 182
Query: 152 THLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA 186
G D+ S+G VL L G P+ G A
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 44/216 (20%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------- 45
+P +GN +RL + IG G+F ++ L +I T +EVA+K+ + KT+
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVKIID-KTQLNSSSLQKLFREVRIM 67
Query: 46 ----HPQLLY-------ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN 94
HP ++ E LY +++ +G + G +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 95 FCSRK------LSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
+C +K L + +L+ AD + I DFG + ++ + G+ YA
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD--------TFCGSPPYA 179
Query: 149 SMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 183
+ G + + D+ SLG +L + GSLP+ G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 44/216 (20%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------- 45
+P +GN +RL + IG G+F ++ L +I T +EVA+K+ + KT+
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVKIID-KTQLNSSSLQKLFREVRIM 67
Query: 46 ----HPQLLY-------ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN 94
HP ++ E LY +++ +G + G +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 95 FCSRK------LSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
+C +K L + +L+ AD + I DFG + ++ + G+ YA
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD--------TFCGSPPYA 179
Query: 149 SMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 183
+ G + + D+ SLG +L + GSLP+ G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 44/216 (20%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------- 45
+P +GN +RL + IG G+F ++ L +I T +EVA+K+ + KT+
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVKIID-KTQLNSSSLQKLFREVRIM 67
Query: 46 ----HPQLLY-------ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN 94
HP ++ E LY +++ +G + G +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 95 FCSRK------LSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
+C +K L + +L+ AD + I DFG + ++ + G YA
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD--------AFCGAPPYA 179
Query: 149 SMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 183
+ G + + D+ SLG +L + GSLP+ G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 103/276 (37%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V+ ++D L P L D+ N+ R
Sbjct: 79 YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 192
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 237
Query: 214 TEFASYFH--YCRSLRFD--DKPDYAYLKRIFRDLF 245
E H C+ R D ++P + YL+ D F
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 104/285 (36%), Gaps = 79/285 (27%)
Query: 9 FRLGRKIGSGSFGEIYLGT-NIQTNEEVA---------------------------IKLE 40
+L +K+G+G FGE+++ T N T V +KL
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 249
Query: 41 NVKTKHP-----QLLYESKLYRILQGGTG----IPNVRWFGVEGDYNVLVMDLLGPSLED 91
V TK P + + + L L+ G +P + D++ + + G + +
Sbjct: 250 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI------DFSAQIAE--GMAFIE 301
Query: 92 LFNFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKN--LTGTARYAS 149
N+ R L +L+ A + I DFGLA+ D RE + TA A
Sbjct: 302 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA----REGAKFPIKWTAPEAI 357
Query: 150 MNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 208
I + D+ S G +LM + G +P+ G+ I AL
Sbjct: 358 NFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSN---------------PEVIRAL 398
Query: 209 CRGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
RGY P E + C R +++P + Y++ + D +
Sbjct: 399 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 44/216 (20%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------- 45
+P +GN +RL + IG G+F ++ L +I T +EVA+++ + KT+
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVRIID-KTQLNSSSLQKLFREVRIM 67
Query: 46 ----HPQLLY-------ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN 94
HP ++ E LY +++ +G + G +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 95 FCSRK------LSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
+C +K L + +L+ AD + I DFG + ++ + G+ YA
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD--------TFCGSPPYA 179
Query: 149 SMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 183
+ G + + D+ SLG +L + GSLP+ G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 103/276 (37%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V+ ++D L P L D+ N+ R
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 192
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 237
Query: 214 TEFASYFH--YCRSLRFD--DKPDYAYLKRIFRDLF 245
E H C+ R D ++P + YL+ D F
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 44/216 (20%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------- 45
+P +GN +RL + IG G+F ++ L +I T +EVA+++ + KT+
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVRIID-KTQLNSSSLQKLFREVRIM 67
Query: 46 ----HPQLLY-------ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN 94
HP ++ E LY +++ +G + G +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 95 FCSRK------LSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
+C +K L + +L+ AD + I DFG + ++ + G+ YA
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE--------FCGSPPYA 179
Query: 149 SMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 183
+ G + + D+ SLG +L + GSLP+ G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 103/276 (37%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L+ +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 192
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 237
Query: 214 TEFASYFH--YCRSLRFD--DKPDYAYLKRIFRDLF 245
E H C+ R D ++P + YL+ D F
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 59/223 (26%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV-KTKHPQLLYESKLYRILQGGT 63
+ + F RK+GSG+FG+++L + E IK N +++ P E+++ +L+
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEI-EVLKSLD 78
Query: 64 GIPNVRWFGVEGDYN--VLVMDLL--GPSLEDLFNFCSR--KLSLKTVLMLADQM----- 112
++ F V DY+ +VM+ G LE + + +R LS V L QM
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 113 ---------------------------VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTA 145
+ IIDFGLA+ ++ + +H + N GTA
Sbjct: 139 YFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK---SDEH-----STNAAGTA 190
Query: 146 RYASMNTHLGIEQSRRD-----DLESLGYVLMYFLRGSLPWQG 183
Y + E +RD D+ S G V+ + L G LP+ G
Sbjct: 191 LY------MAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTG 227
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 68 VRWFGVEGDYNV-------LVMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 79 YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 192
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 237
Query: 214 TEFASYFH--YCRSLRFD--DKPDYAYLKRIFRDLF 245
E H C+ R D ++P + YL+ D F
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 106/278 (38%), Gaps = 65/278 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V+ ++D L P L D+ N+ R
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDT--STHQHIPYRENKNLTGTARYASMNTHLGI 156
L +L+ + + + DFGLA+ D + Q + + TA A++ I
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF----PIKWTAPEAALYGRFTI 194
Query: 157 EQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY--- 212
+ D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 195 ----KSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMP 235
Query: 213 -PTEFASYFH--YCRSLRFD--DKPDYAYLKRIFRDLF 245
P E H C+ R D ++P + YL+ D F
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 42/210 (20%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------ENVK--------TKHPQ- 48
+++ L + IGSG+FG L + Q+NE VA+K ENVK +HP
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 76
Query: 49 ------LLYESKLYRILQGGTG------IPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF 95
+L + L +++ +G I N F E + L+ G S
Sbjct: 77 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLISGVSYCHAMQV 135
Query: 96 CSRKLSLKTVLMLADQM--VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
C R L L+ L+ + I DFG +K + + + K+ GT Y +
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSK--------SSVLHSQPKSTVGTPAYIAPEVL 187
Query: 154 LGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 182
L E + D+ S G L L G+ P++
Sbjct: 188 LKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 79 YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 192
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 237
Query: 214 TEFASYFH--YCRSLRFD--DKPDYAYLKRIFRDLF 245
E H C+ R D ++P + YL+ D F
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 103/284 (36%), Gaps = 79/284 (27%)
Query: 9 FRLGRKIGSGSFGEIYLGT-NIQTNEEVA---------------------------IKLE 40
+L +K+G+G FGE+++ T N T V +KL
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 41 NVKTKHP-----QLLYESKLYRILQGGTG----IPNVRWFGVEGDYNVLVMDLLGPSLED 91
V TK P + + + L L+ G +P + D++ + + G + +
Sbjct: 77 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI------DFSAQIAE--GMAFIE 128
Query: 92 LFNFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKN--LTGTARYAS 149
N+ R L +L+ A + I DFGLA+ D RE + TA A
Sbjct: 129 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA----REGAKFPIKWTAPEAI 184
Query: 150 MNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 208
I + D+ S G +LM + G +P+ G+ I AL
Sbjct: 185 NFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSN---------------PEVIRAL 225
Query: 209 CRGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRIFRDL 244
RGY P E + C R +++P + Y++ + D
Sbjct: 226 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 44/216 (20%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------- 45
+P +GN +RL + IG G+F ++ L +I T +EVA+K+ + KT+
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVKIID-KTQLNSSSLQKLFREVRIX 67
Query: 46 ----HPQLLY-------ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN 94
HP ++ E LY + + +G + G +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ 127
Query: 95 FCSRK------LSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
+C +K L + +L+ AD + I DFG + ++ + G YA
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA--------FCGAPPYA 179
Query: 149 SMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 183
+ G + + D+ SLG +L + GSLP+ G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIE 157
R + + +L+ AD Y++DFG+A D Q N GT Y +
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQL------GNTVGTLYYXAPERFSESH 211
Query: 158 QSRRDDLESLGYVLMYFLRGSLPWQG 183
+ R D+ +L VL L GS P+QG
Sbjct: 212 ATYRADIYALTCVLYECLTGSPPYQG 237
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 192
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 237
Query: 214 TEFASYFH--YCRSLRFD--DKPDYAYLKRIFRDLF 245
E H C+ R D ++P + YL+ D F
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 46/214 (21%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNI-------------------QTNEEVAIKLEN---VKT 44
++F L + +G GSFG+++L I + + V K+E V+
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 45 KHP---QLLY----ESKLYRI---LQGG---TGIPNVRWFGVEGDYNVLVMDLLGPSLED 91
HP +L Y E KLY I L+GG T + F E D + + L +L+
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAE-LALALDH 141
Query: 92 L--FNFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYAS 149
L R L + +L+ + + + DFGL+K+ D H+ Y + GT Y +
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID---HEKKAY----SFCGTVEYMA 194
Query: 150 MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
++ D S G ++ L G+LP+QG
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 9 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 67
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 68 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 127
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 181
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 226
Query: 214 TEFASYFH--YCRSLRFD--DKPDYAYLKRIFRDLF 245
E H C+ R D ++P + YL+ D F
Sbjct: 227 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 262
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 11 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 69
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 70 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 183
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 228
Query: 214 TEFASYFH--YCRSLRFD--DKPDYAYLKRIFRDLF 245
E H C+ R D ++P + YL+ D F
Sbjct: 229 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 264
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 80/215 (37%), Gaps = 52/215 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 49 LLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGP------------------SLE 90
+ KLY Q + +FG+ N ++ + +LE
Sbjct: 94 FV---KLYFTFQDDEKL----YFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 91 DLFN--FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
L R L + +L+ D + I DFG AK S R N + GTA+Y
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-SFVGTAQYV 201
Query: 149 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
S S+ DL +LG ++ + G P++
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + ++ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL 78
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 192
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 237
Query: 214 TEFASYFH--YCRSLRFD--DKPDYAYLKRIFRDLF 245
E H C+ R D ++P + YL+ D F
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 269 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 327
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 387
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 441
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 486
Query: 214 TEFASYFH--YCRSLRF--DDKPDYAYLKRIFRDLF 245
E H C+ R +++P + YL+ D F
Sbjct: 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 65/278 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
+L +++G+G FGE+++GT N +VAIK T P+ L E+++ + L+ +
Sbjct: 11 LQLIKRLGNGQFGEVWMGT-WNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL 69
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P+L D+ N+ R
Sbjct: 70 YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHR 129
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDT--STHQHIPYRENKNLTGTARYASMNTHLGI 156
L +L+ + I DFGLA+ D + Q + + TA A++ I
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF----PIKWTAPEAALYGRFTI 185
Query: 157 EQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY--- 212
+ D+ S G +L + +G +P+ G+ +E + RGY
Sbjct: 186 ----KSDVWSFGILLTELVTKGRVPYPGMNN---------------REVLEQVERGYRMP 226
Query: 213 -----PTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P +C +++P + YL+ D F
Sbjct: 227 CPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYF 264
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 46/214 (21%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNI-------------------QTNEEVAIKLEN---VKT 44
++F L + +G GSFG+++L I + + V K+E V+
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 45 KHP---QLLY----ESKLYRI---LQGG---TGIPNVRWFGVEGDYNVLVMDLLGPSLED 91
HP +L Y E KLY I L+GG T + F E D + + L +L+
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAE-LALALDH 142
Query: 92 L--FNFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYAS 149
L R L + +L+ + + + DFGL+K+ D H+ Y + GT Y +
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID---HEKKAY----SFCGTVEYMA 195
Query: 150 MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
++ D S G ++ L G+LP+QG
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 229
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 46/214 (21%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNI-------------------QTNEEVAIKLEN---VKT 44
++F L + +G GSFG+++L I + + V K+E V+
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 45 KHP---QLLY----ESKLYRI---LQGG---TGIPNVRWFGVEGDYNVLVMDLLGPSLED 91
HP +L Y E KLY I L+GG T + F E D + + L +L+
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAE-LALALDH 141
Query: 92 L--FNFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYAS 149
L R L + +L+ + + + DFGL+K+ D H+ Y + GT Y +
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID---HEKKAY----SFCGTVEYMA 194
Query: 150 MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
++ D S G ++ L G+LP+QG
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
NF R L+ + VL++ I DFGL+K R + Y+ + ++ +
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECI 545
Query: 154 LGIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRG 211
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 546 NYYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------G 597
Query: 212 YPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E + C + +++P +A ++ R+ +
Sbjct: 598 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 631
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
NF R L+ + VL++ I DFGL+K R + Y+ + ++ +
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECI 544
Query: 154 LGIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRG 211
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 545 NYYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------G 596
Query: 212 YPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E + C + +++P +A ++ R+ +
Sbjct: 597 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 45/210 (21%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----------LLYESKLYRIL- 59
+G++IGSGSFG +Y G + + +VA+K+ NV PQ +L +++ IL
Sbjct: 28 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 60 -QGGTGIPNV----RWFGVEGDYNVLVMDLLGPSLEDLFNFC----------------SR 98
G + P + +W Y+ L ++ L + R
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 99 KLSLKTVLMLADQMVYIIDFGLA-KKYRDTSTHQHIPYRENKNLTGTARYAS---MNTHL 154
L + + D V I DFGLA +K R + +HQ + L+G+ + + +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF------EQLSGSILWMAPEVIRMQD 198
Query: 155 GIEQSRRDDLESLGYVLMYFLRGSLPWQGL 184
S + D+ + G VL + G LP+ +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGI 65
+ ++L RK+G G + E++ NI NE+V +K+ K ++ E K+ L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK-PVKKNKIKREIKILENLRGGPNI 94
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 106/274 (38%), Gaps = 51/274 (18%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----------LLYESKLYRIL- 59
+G++IGSGSFG +Y G + + +VA+K+ NV PQ +L +++ IL
Sbjct: 28 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 60 -QGGTGIPNV----RWFGVEGDYNVLVMDLLGPSLEDLFNFC----------------SR 98
G + P + +W Y+ L ++ L + R
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 99 KLSLKTVLMLADQMVYIIDFGLA-KKYRDTSTHQHIPYRENKNLTGTARYAS---MNTHL 154
L + + D V I DFGLA +K R + +HQ + L+G+ + + +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF------EQLSGSILWMAPEVIRMQD 198
Query: 155 GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGYPT 214
S + D+ + G VL + G LP+ + +S + + P
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIEMVGRGSLSPDLSKVRSNCPK 256
Query: 215 EFASYFHYCRSLRFDDKPDY----AYLKRIFRDL 244
C + D++P + A ++ + R+L
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIEELAREL 290
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 79/213 (37%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 90
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P +L GT Y
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRDDLCGTLDYLPP 201
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 83/211 (39%), Gaps = 44/211 (20%)
Query: 9 FRLGRKIGSGSFGEIYL-------------------GTNIQTNEEVAIKLEN---VKTKH 46
F L + +G GSFG+++L ++ + V K+E H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 47 P---QLLY----ESKLYRIL---QGG---TGIPNVRWFGVEGDYNVLVMDL-LGPSLEDL 92
P +L Y E KLY IL +GG T + F E D + +L LG
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLAELALGLDHLHS 148
Query: 93 FNFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNT 152
R L + +L+ + + + DFGL+K+ D H+ Y + GT Y +
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID---HEKKAY----SFCGTVEYMAPEV 201
Query: 153 HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
S D S G ++ L GSLP+QG
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTGSLPFQG 232
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 42/210 (20%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--------LENVK--------TKHPQ- 48
+++ L + IGSG+FG L + Q+NE VA+K NVK +HP
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNI 77
Query: 49 ------LLYESKLYRILQGGTG------IPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF 95
+L + L +++ +G I N F E + L+ G S
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLISGVSYCHAMQV 136
Query: 96 CSRKLSLKTVLMLADQM--VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
C R L L+ L+ + I DFG +K + + + K+ GT Y +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSK--------SSVLHSQPKSTVGTPAYIAPEVL 188
Query: 154 LGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 182
L E + D+ S G L L G+ P++
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 13 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 71
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 72 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 131
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 185
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 186 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 230
Query: 214 TEFASYFH--YCRSLRF--DDKPDYAYLKRIFRDLF 245
E H C+ R +++P + YL+ D F
Sbjct: 231 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 266
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 75
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 189
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 234
Query: 214 TEFASYFH--YCRSLRF--DDKPDYAYLKRIFRDLF 245
E H C+ R +++P + YL+ D F
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 270
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 42/210 (20%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------ENVK--------TKHPQ- 48
+++ L + IGSG+FG L + Q+NE VA+K ENVK +HP
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 49 ------LLYESKLYRILQGGTG------IPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF 95
+L + L +++ +G I N F E + L+ G S
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLISGVSYCHAMQV 136
Query: 96 CSRKLSLKTVLMLADQM--VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
C R L L+ L+ + I FG +K + + + K+ GT Y +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK--------SSVLHSQPKDTVGTPAYIAPEVL 188
Query: 154 LGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 182
L E + D+ S G L L G+ P++
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 69
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 180
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 79/213 (37%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 67
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P +L GT Y
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRDDLCGTLDYLPP 178
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 43/200 (21%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENV------------------KTKHPQL------ 49
+IG GSFGE+Y G + T E VAIK+ ++ + P +
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 50 -LYESKLYRILQ---GGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN--FCSRKLSLK 103
L +KL+ I++ GG+ + ++ +E Y ++ + L+ L + R +
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAA 145
Query: 104 TVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRD- 162
VL+ V + DFG+A + DT ++ GT + + I+QS D
Sbjct: 146 NVLLSEQGDVKLADFGVAGQLTDTQIKRN-------XFVGTPFWMAPEV---IKQSAYDF 195
Query: 163 --DLESLGYVLMYFLRGSLP 180
D+ SLG + +G P
Sbjct: 196 KADIWSLGITAIELAKGEPP 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 76/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N + GTA+Y S
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-SFVGTAQYVSPELLTE 209
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 90
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 201
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 79/213 (37%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 69
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P +L GT Y
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTDLCGTLDYLPP 180
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 79/213 (37%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 65
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P +L GT Y
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTDLCGTLDYLPP 176
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 106/277 (38%), Gaps = 51/277 (18%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----------LLYESKLYR 57
+ +G++IGSGSFG +Y G + + +VA+K+ NV PQ +L +++
Sbjct: 13 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 69
Query: 58 IL--QGGTGIPNV----RWFGVEGDYNVLVMDLLGPSLEDLFNFC--------------- 96
IL G + P + +W Y+ L ++ L +
Sbjct: 70 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 97 -SRKLSLKTVLMLADQMVYIIDFGLAK-KYRDTSTHQHIPYRENKNLTGTARYAS---MN 151
R L + + D V I DFGLA K R + +HQ + L+G+ + + +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF------EQLSGSILWMAPEVIR 183
Query: 152 THLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRG 211
S + D+ + G VL + G LP+ + +S + +
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIEMVGRGSLSPDLSKVRSN 241
Query: 212 YPTEFASYFHYCRSLRFDDKPDY----AYLKRIFRDL 244
P C + D++P + A ++ + R+L
Sbjct: 242 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 278
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 105/278 (37%), Gaps = 65/278 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 75
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDT--STHQHIPYRENKNLTGTARYASMNTHLGI 156
L +L+ + + + DFGLA+ D + Q + + TA A++ I
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF----PIKWTAPEAALYGRFTI 191
Query: 157 EQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY--- 212
+ D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 192 ----KSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMP 232
Query: 213 -PTEFASYFH--YCRSLRF--DDKPDYAYLKRIFRDLF 245
P E H C+ R +++P + YL+ D F
Sbjct: 233 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 270
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 42/210 (20%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------ENVK--------TKHPQ- 48
+++ L + IGSG+FG L + Q+NE VA+K ENVK +HP
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 49 ------LLYESKLYRILQGGTG------IPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF 95
+L + L +++ +G I N F E + L+ G S
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLISGVSYCHAMQV 136
Query: 96 CSRKLSLKTVLMLADQM--VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
C R L L+ L+ + I FG +K + + + K+ GT Y +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK--------SSVLHSQPKSTVGTPAYIAPEVL 188
Query: 154 LGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 182
L E + D+ S G L L G+ P++
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 244
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 358
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 403
Query: 214 TEFASYFH--YCRSLRF--DDKPDYAYLKRIFRDLF 245
E H C+ R +++P + YL+ D F
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 79/213 (37%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 64
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P +L GT Y
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTDLCGTLDYLPP 175
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 79/213 (37%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 65
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L+GT Y
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------CHAPSSRRTTLSGTLDYLPP 176
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 244
Query: 68 VRWFGVEGDYNVL-------VMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 358
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 403
Query: 214 TEFASYFH--YCRSLRF--DDKPDYAYLKRIFRDLF 245
E H C+ R +++P + YL+ D F
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 79/213 (37%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 64
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P +L GT Y
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTDLCGTLDYLPP 175
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 64
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTELCGTLDYLPP 175
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 64
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 175
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 50/216 (23%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV----KTKHPQLLYESKLYRILQ 60
+GN +RL + IG G+F ++ L +I T +EVA+K+ + + +L E ++ ++L
Sbjct: 6 IGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN 64
Query: 61 GGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFN------------------------- 94
PN V+ F V L + + S ++F+
Sbjct: 65 H----PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ 120
Query: 95 FCSRK------LSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
+C +K L + +L+ AD + I DFG + ++ + G+ YA
Sbjct: 121 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD--------TFCGSPPYA 172
Query: 149 SMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 183
+ G + + D+ SLG +L + GSLP+ G
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 209
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 211
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 44/209 (21%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGI--P 66
F +GR +G G FG +YL Q+ +A+K+ KT+ + E +L R ++ + + P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKV-LFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 67 NV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC---- 96
N+ R +G D Y +L LG L + ++C
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 97 --SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHL 154
R + + +L+ ++ + I DFG + H P L GT Y
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWS---------VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 155 GIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 186
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 208
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 65
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRDTLCGTLDYLPP 176
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 208
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 66/165 (40%), Gaps = 43/165 (26%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE----VAIKL--ENVKTK-HPQLLYESKLYRIL 59
+ R + +GSG+FG +Y G I E VAIK+ EN K + ++L E+ +
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEA----YV 72
Query: 60 QGGTGIPNV-RWFGVEGDYNVLVMDLLGP---------------SLEDLFNFC------- 96
G G P V R G+ V ++ L P +DL N+C
Sbjct: 73 MAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGM 132
Query: 97 ---------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQH 132
R L+ + VL+ + V I DFGLA+ T H
Sbjct: 133 SYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 177
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 68
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 128
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 179
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 212
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 208
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 213
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 69
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 180
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 85/213 (39%), Gaps = 45/213 (21%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---ENVKTK-----------------H 46
++++ R +G GSFGE+ L + T +E A+K+ VK K H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 47 PQL-----LYESKLYRILQGG--TG------IPNVRWFGVEGDYNVLVMDLLGPSLEDLF 93
P + +E K Y L G TG I + + F ++ L G +
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 94 NFCSRKLSLKTVLMLA---DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R L + +L+ + D + IIDFGL STH ++ K+ GTA Y +
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEAS-KKXKDKIGTAYYIAP 197
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + D+ S G +L L G P+ G
Sbjct: 198 EVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 44/209 (21%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGI--P 66
F +GR +G G FG +YL Q+ +A+K+ KT+ + E +L R ++ + + P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKV-LFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 67 NV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC---- 96
N+ R +G D Y +L LG L + ++C
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 97 --SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHL 154
R + + +L+ ++ + I DFG + H P L GT Y
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 155 GIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 67
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 178
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
NF R L+ + VL++ I DFGL+K R + Y+ + ++ +
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECI 200
Query: 154 LGIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRG 211
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 201 NYYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------G 252
Query: 212 YPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E + C + +++P +A ++ R+ +
Sbjct: 253 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 286
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 66
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRXXLCGTLDYLPP 177
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 102/276 (36%), Gaps = 61/276 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+ +
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 244
Query: 68 VRWFGVEGDYNV-------LVMDLLG---------PSLEDL-------------FNFCSR 98
E Y V ++D L P L D+ N+ R
Sbjct: 245 YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L +L+ + + + DFGLA+ D Y + ++ + L
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYGRF 358
Query: 159 SRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY----P 213
+ + D+ S G +L +G +P+ G+ V +E RGY P
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYRMPCP 403
Query: 214 TEFASYFH--YCRSLRF--DDKPDYAYLKRIFRDLF 245
E H C+ R +++P + YL+ D F
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 206
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 63
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 123
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 174
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 185
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGT 63
+V + + + IG GS+G +YL + N+ VAIK N + + L + K RIL+ T
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVN---RMFEDLIDCK--RILREIT 79
Query: 64 GIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAD 110
+ ++ DY + + DL+ P EDL F L VL +AD
Sbjct: 80 ILNRLK-----SDYIIRLHDLIIP--EDLLKFD----ELYIVLEIAD 115
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 107/281 (38%), Gaps = 71/281 (25%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
RL K+G G FGE+++GT T VAIK T P+ L E+++ + L+
Sbjct: 10 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEK---L 65
Query: 68 VRWFGVEGDYNVLV----------MDLLG---------PSLEDL-------------FNF 95
V+ + V + + + +D L P L D+ N+
Sbjct: 66 VQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDT--STHQHIPYRENKNLTGTARYASMNTH 153
R L +L+ + + + DFGLA+ D + Q + + TA A++
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF----PIKWTAPEAALYGR 181
Query: 154 LGIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 212
I + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 182 FTI----KSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGY 222
Query: 213 ----PTEFASYFH--YCRSLRF--DDKPDYAYLKRIFRDLF 245
P E H C+ R +++P + YL+ D F
Sbjct: 223 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 263
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 81
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 141
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 192
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 225
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 206
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RANA-FVGTAQYVSPELLTE 206
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 64
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRXXLCGTLDYLPP 175
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 67
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRAALCGTLDYLPP 178
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 208
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 45/211 (21%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---------------------LENVKTKHP 47
F L + +G GSFG+++L +TN+ AIK + ++ +HP
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 48 QLLY-------ESKLYRILQGGTG------IPNVRWFGVEGDYNVLVMDLLGPSLEDLFN 94
L + + L+ +++ G I + F + +LG
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 139
Query: 95 FCSRKLSLKTVLMLADQMVYIIDFGLAKKYR--DTSTHQHIPYRENKNLTGTARYASMNT 152
R L L +L+ D + I DFG+ K+ D T++ GT Y +
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE---------FCGTPDYIAPEI 190
Query: 153 HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
LG + + D S G +L L G P+ G
Sbjct: 191 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 221
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
NF R L+ + VL++ I DFGL+K R + Y+ + ++ +
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECI 202
Query: 154 LGIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR- 210
+ S + D+ S G VLM+ F G P++G+K V+ +E R
Sbjct: 203 NYYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSE------------VTAMLEKGERM 249
Query: 211 ----GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
G P E + C + +++P +A ++ R+ +
Sbjct: 250 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 288
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
NF R L+ + VL++ I DFGL+K R + Y+ + ++ +
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECI 202
Query: 154 LGIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR- 210
+ S + D+ S G VLM+ F G P++G+K V+ +E R
Sbjct: 203 NYYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSE------------VTAMLEKGERM 249
Query: 211 ----GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
G P E + C + +++P +A ++ R+ +
Sbjct: 250 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 288
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 64
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRAALCGTLDYLPP 175
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 64
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTXLCGTLDYLPP 175
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 208
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
NF R L+ + VL++ I DFGL+K R + Y+ + ++ +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECI 186
Query: 154 LGIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR- 210
+ S + D+ S G VLM+ F G P++G+K V+ +E R
Sbjct: 187 NYYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSE------------VTAMLEKGERM 233
Query: 211 ----GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
G P E + C + +++P +A ++ R+ +
Sbjct: 234 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
NF R L+ + VL++ I DFGL+K R + Y+ + ++ +
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECI 192
Query: 154 LGIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRG 211
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 193 NYYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------G 244
Query: 212 YPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E + C + +++P +A ++ R+ +
Sbjct: 245 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 45/210 (21%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----------LLYESKLYRIL- 59
+G++IGSGSFG +Y G + + +VA+K+ NV PQ +L +++ IL
Sbjct: 40 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 60 -QGGTGIPNV----RWFG----------VEGDYNVL-VMDLLGPSLEDL-----FNFCSR 98
G + P + +W +E + ++ ++D+ + + + + R
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 99 KLSLKTVLMLADQMVYIIDFGLA-KKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIE 157
L + + D V I DFGLA +K R + +HQ + L+G+ + + +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF------EQLSGSILWMAPEVIRMQD 210
Query: 158 Q---SRRDDLESLGYVLMYFLRGSLPWQGL 184
+ S + D+ + G VL + G LP+ +
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 183
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 76/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N + GTA+Y S
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-SFVGTAQYVSPELLTE 205
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 67
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 178
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLL 50
+ +G++IGSGSFG +Y G + + +VA+K+ NV PQ L
Sbjct: 14 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQL 53
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 184
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLL 50
+ +G++IGSGSFG +Y G + + +VA+K+ NV PQ L
Sbjct: 9 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQL 48
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLL 50
+ +G++IGSGSFG +Y G + + +VA+K+ NV PQ L
Sbjct: 14 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQL 53
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 45/210 (21%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----------LLYESKLYRIL- 59
+G++IGSGSFG +Y G + + +VA+K+ NV PQ +L +++ IL
Sbjct: 32 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 60 -QGGTGIPNV----RWFG----------VEGDYNVL-VMDLLGPSLEDL-----FNFCSR 98
G + P + +W +E + ++ ++D+ + + + + R
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 148
Query: 99 KLSLKTVLMLADQMVYIIDFGLA-KKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIE 157
L + + D V I DFGLA +K R + +HQ + L+G+ + + +
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF------EQLSGSILWMAPEVIRMQD 202
Query: 158 Q---SRRDDLESLGYVLMYFLRGSLPWQGL 184
+ S + D+ + G VL + G LP+ +
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNI 232
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 45/213 (21%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---ENVKTK-----------------H 46
++++ R +G GSFGE+ L + T +E A+K+ VK K H
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 47 PQLL-----YESKLYRILQGG--TG------IPNVRWFGVEGDYNVLVMDLLGPSLEDLF 93
P ++ +E K Y L G TG I + + F ++ L G +
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 94 NFCSRKLSLKTVLMLA---DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R L + +L+ + D + IIDFGL+ + + ++ K+ GTA Y +
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--------KKMKDKIGTAYYIAP 220
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + D+ S G +L L G P+ G
Sbjct: 221 EVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG 252
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLL 50
+ +G++IGSGSFG +Y G + + +VA+K+ NV PQ L
Sbjct: 9 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQL 48
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
NF R L+ + VL++ I DFGL+K R + Y+ + ++ +
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECI 180
Query: 154 LGIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR- 210
+ S + D+ S G VLM+ F G P++G+K V+ +E R
Sbjct: 181 NYYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSE------------VTAMLEKGERM 227
Query: 211 ----GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
G P E + C + +++P +A ++ R+ +
Sbjct: 228 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 266
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLL 50
+ +G++IGSGSFG +Y G + + +VA+K+ NV PQ L
Sbjct: 11 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQL 50
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 45/213 (21%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---ENVKTK-----------------H 46
++++ R +G GSFGE+ L + T +E A+K+ VK K H
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 47 PQLL-----YESKLYRILQGG--TG------IPNVRWFGVEGDYNVLVMDLLGPSLEDLF 93
P ++ +E K Y L G TG I + + F ++ L G +
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 94 NFCSRKLSLKTVLMLA---DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R L + +L+ + D + IIDFGL+ + + ++ K+ GTA Y +
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--------KKMKDKIGTAYYIAP 203
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + D+ S G +L L G P+ G
Sbjct: 204 EVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG 235
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 45/213 (21%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---ENVKTK-----------------H 46
++++ R +G GSFGE+ L + T +E A+K+ VK K H
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 47 PQLL-----YESKLYRILQGG--TG------IPNVRWFGVEGDYNVLVMDLLGPSLEDLF 93
P ++ +E K Y L G TG I + + F ++ L G +
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 94 NFCSRKLSLKTVLMLA---DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R L + +L+ + D + IIDFGL+ + + ++ K+ GTA Y +
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--------KKMKDKIGTAYYIAP 221
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + D+ S G +L L G P+ G
Sbjct: 222 EVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG 253
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In
Complex With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In
Complex With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With
A Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With
A Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An
Bromopyridine Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An
Bromopyridine Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With
A Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With
A Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLL 50
+G++IGSGSFG +Y G + + +VA+K+ NV PQ L
Sbjct: 40 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQL 76
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLL 50
+G++IGSGSFG +Y G + + +VA+K+ NV PQ L
Sbjct: 39 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQL 75
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 67
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRXXLCGTLDYLPP 178
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLL 50
+ +G++IGSGSFG +Y G + + +VA+K+ NV PQ L
Sbjct: 9 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQL 48
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 190
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
NF R L+ + VL++ I DFGL+K R + Y+ + ++ +
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECI 182
Query: 154 LGIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR- 210
+ S + D+ S G VLM+ F G P++G+K V+ +E R
Sbjct: 183 NYYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSE------------VTAMLEKGERM 229
Query: 211 ----GYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
G P E + C + +++P +A ++ R+ +
Sbjct: 230 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVK----------TKHPQLLYESKL 55
+++++G +GSG FG +Y G + N VAIK +E + T+ P + L
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV--LL 65
Query: 56 YRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
++ G +G+ + WF D VL+++ + P ++DLF+F + + +L+ L
Sbjct: 66 KKVSSGFSGVIRLLDWFE-RPDSFVLILERMEP-VQDLFDFITERGALQEEL 115
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQLLYESKLYRILQ--G 61
+ N F + RK+G G+FG + L +I + A+K + N+K E+ + + +Q
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDD 92
Query: 62 GTGIPNVRWFG--VEGDYNVLVMDLLGPSLEDLF 93
V++ G + D+ L+ + LGPSL ++
Sbjct: 93 INNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEII 126
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF + L + T+ E AIK+ EN + HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 205
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 74/211 (35%), Gaps = 48/211 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENV--------------KTKHPQ 48
F +GR +G G FG +YL Q+ +A+K LE +HP
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 49 LLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLG----------PSLEDLFNFC-- 96
+L +LY T + + + G+ + L L + ++C
Sbjct: 75 IL---RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 97 ----SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNT 152
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPPEM 182
Query: 153 HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 14/154 (9%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
NF R L+ + VL++ I DFGL+K R Y+ + ++ +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENX----YKAQTHGKWPVKWYAPECI 186
Query: 154 LGIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRG 211
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 187 NYYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------G 238
Query: 212 YPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E + C + +++P +A ++ R+ +
Sbjct: 239 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 86/213 (40%), Gaps = 45/213 (21%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---ENVKTK-----------------H 46
++++ R +G GSFGE+ L + T +E A+K+ VK K H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 47 PQLL-----YESKLYRILQGG--TG------IPNVRWFGVEGDYNVLVMDLLGPSLEDLF 93
P ++ +E K Y L G TG I + + F ++ L G +
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 94 NFCSRKLSLKTVLMLA---DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R L + +L+ + D + IIDFGL STH ++ K+ GTA Y +
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEAS-KKMKDKIGTAYYIAP 197
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + D+ S G +L L G P+ G
Sbjct: 198 EVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 77/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q +A+K LE +H QL E + +Q
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 61
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 121
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 172
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 82/210 (39%), Gaps = 42/210 (20%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------ENVK--------TKHPQ- 48
+++ L + IG+G+FG L + Q NE VA+K ENVK +HP
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 49 ------LLYESKLYRILQGGTG------IPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF 95
+L + L +++ +G I N F E + L+ G S
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLISGVSYAHAMQV 136
Query: 96 CSRKLSLKTVLMLADQM--VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R L L+ L+ + I DFG +K + + + K+ GT Y +
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKA--------SVLHSQPKSAVGTPAYIAPEVL 188
Query: 154 LGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 182
L E + D+ S G L L G+ P++
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK 38
+++R K+G G++GE+Y + TNE VAIK
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIK 65
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 74/208 (35%), Gaps = 38/208 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------EN------------VKTKHPQ 48
F+ G+ +G GSF L + T+ E AIK+ EN + HP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 49 L--LY-----ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF------ 95
LY + KLY L +++ G ++ + +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R L + +L+ D + I DFG AK S R N GTA+Y S
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA----RAN-XFVGTAQYVSPELLTE 206
Query: 156 IEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +LG ++ + G P++
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 45/215 (20%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK----------------LENV----KT 44
+ ++++ +K+GSG++GE+ L + T E AIK L+ V +
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 45 KHPQLL-----YESK-----LYRILQGGTGIPNV--RWFGVEGDYNVLVMDLL-GPSLED 91
HP ++ +E K + + +GG + R E D V++ +L G +
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 92 LFNFCSRKLSLKTVLMLA---DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
N R L + +L+ + D ++ I+DFGL S H + + + L GTA Y
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGL-------SAHFEVGGKMKERL-GTAYYI 190
Query: 149 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ L + + D+ S G +L L G P+ G
Sbjct: 191 APEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGG 224
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 67
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 68 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 181
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 36/143 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIK-------------LENV-----KTKHPQL-----LY 51
+G+G+F E+ L + +T + VAIK +EN K KHP + +Y
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 52 ES--KLYRILQ---GGTGIPNV--RWFGVEGDYNVLVMDLLGPS--LEDLFNFCSRKLSL 102
ES LY I+Q GG + + F E D + L+ +L L DL R L
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKP 144
Query: 103 KTVLMLA---DQMVYIIDFGLAK 122
+ +L + D + I DFGL+K
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSK 167
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 66
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I +FG + H P L GT Y
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGWS---------VHAPSSRRTTLCGTLDYLPP 177
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 50/216 (23%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLEN-------------------VKTKH 46
++ + +G GSFGE+ + T +E A+K+ N K H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 47 PQLLYESKLYRILQGGTG----------------IPNVRWFGVEGDYNVLVMDLLGPSLE 90
P ++ KL+ IL+ + I + F ++ G +
Sbjct: 81 PNIM---KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 91 DLFNFCSRKLSLKTVLMLA---DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 147
N R L + +L+ + D + IIDFGL+ ++ + + K+ GTA Y
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--------KMKDRIGTAYY 189
Query: 148 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ G + D+ S G +L L G+ P+ G
Sbjct: 190 IAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 50/216 (23%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLEN-------------------VKTKH 46
++ + +G GSFGE+ + T +E A+K+ N K H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 47 PQLLYESKLYRILQGGTG----------------IPNVRWFGVEGDYNVLVMDLLGPSLE 90
P ++ KL+ IL+ + I + F ++ G +
Sbjct: 81 PNIM---KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 91 DLFNFCSRKLSLKTVLMLA---DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 147
N R L + +L+ + D + IIDFGL+ ++ + + K+ GTA Y
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--------KMKDRIGTAYY 189
Query: 148 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ G + D+ S G +L L G+ P+ G
Sbjct: 190 IAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 36/143 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIK-------------LENV-----KTKHPQL-----LY 51
+G+G+F E+ L + +T + VAIK +EN K KHP + +Y
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 52 ES--KLYRILQ---GGTGIPNV--RWFGVEGDYNVLVMDLLGPS--LEDLFNFCSRKLSL 102
ES LY I+Q GG + + F E D + L+ +L L DL R L
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKP 144
Query: 103 KTVLMLA---DQMVYIIDFGLAK 122
+ +L + D + I DFGL+K
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSK 167
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 74/211 (35%), Gaps = 48/211 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENV--------------KTKHPQ 48
F +GR +G G FG +YL Q+ +A+K LE +HP
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 49 LLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLG----------PSLEDLFNFC-- 96
+L +LY T + + + G+ + L L + ++C
Sbjct: 75 IL---RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 97 ----SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNT 152
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRXXLXGTLDYLPPEM 182
Query: 153 HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 36/143 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIK-------------LENV-----KTKHPQL-----LY 51
+G+G+F E+ L + +T + VAIK +EN K KHP + +Y
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 52 ES--KLYRILQ---GGTGIPNV--RWFGVEGDYNVLVMDLLGPS--LEDLFNFCSRKLSL 102
ES LY I+Q GG + + F E D + L+ +L L DL R L
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKP 144
Query: 103 KTVLMLA---DQMVYIIDFGLAK 122
+ +L + D + I DFGL+K
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSK 167
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL Q+ +A+K LE +H QL E + +Q
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 67
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I +FG + H P L GT Y
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGWS---------VHAPSSRRTTLCGTLDYLPP 178
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV- 67
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 68 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 181
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 67
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 68 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 181
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 78/211 (36%), Gaps = 45/211 (21%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---------------------LENVKTKHP 47
F L + +G GSFG+++L +TN+ AIK + ++ +HP
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 48 QLLY-------ESKLYRILQGGTG------IPNVRWFGVEGDYNVLVMDLLGPSLEDLFN 94
L + + L+ +++ G I + F + +LG
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 95 FCSRKLSLKTVLMLADQMVYIIDFGLAKKYR--DTSTHQHIPYRENKNLTGTARYASMNT 152
R L L +L+ D + I DFG+ K+ D T+ GT Y +
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX---------FCGTPDYIAPEI 189
Query: 153 HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
LG + + D S G +L L G P+ G
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 67
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 68 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 181
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 67
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 68 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 181
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 65
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 66 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 124
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 179
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 36/143 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIK-------------LENV-----KTKHPQL-----LY 51
+G+G+F E+ L + +T + VAIK +EN K KHP + +Y
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 52 ES--KLYRILQ---GGTGIPNV--RWFGVEGDYNVLVMDLLGPS--LEDLFNFCSRKLSL 102
ES LY I+Q GG + + F E D + L+ +L L DL R L
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKP 144
Query: 103 KTVLMLA---DQMVYIIDFGLAK 122
+ +L + D + I DFGL+K
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSK 167
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 79
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 80 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 130
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 81/210 (38%), Gaps = 42/210 (20%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------ENVK--------TKHPQ- 48
+++ + IGSG+FG L + T E VA+K ENV+ +HP
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNI 78
Query: 49 ------LLYESKLYRILQGGTG------IPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF 95
+L + L I++ +G I N F E + LL G S
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFS-EDEARFFFQQLLSGVSYCHSMQI 137
Query: 96 CSRKLSLKTVLMLADQM--VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
C R L L+ L+ + I DFG +K + + + K+ GT Y +
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKS--------SVLHSQPKSTVGTPAYIAPEVL 189
Query: 154 LGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 182
L E + D+ S G L L G+ P++
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 45/215 (20%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK----------------LENV----KT 44
+ ++++ +K+GSG++GE+ L + T E AIK L+ V +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 45 KHPQLL-----YESK-----LYRILQGGTGIPNV--RWFGVEGDYNVLVMDLL-GPSLED 91
HP ++ +E K + + +GG + R E D V++ +L G +
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 92 LFNFCSRKLSLKTVLMLA---DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 148
N R L + +L+ + D ++ I+DFGL S H + + + L GTA Y
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGL-------SAHFEVGGKMKERL-GTAYYI 173
Query: 149 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ L + + D+ S G +L L G P+ G
Sbjct: 174 APEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGG 207
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 80
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 81 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 131
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 80
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 81 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 131
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 79
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 80 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 130
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 67
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 68 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 181
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIK 38
R+IG GSFG +Y +++ +E VAIK
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIK 46
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 77/213 (36%), Gaps = 52/213 (24%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKLYRILQGG 62
F +GR +G G FG +YL + +A+K LE +H QL E + +Q
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEH-QLRREVE----IQSH 64
Query: 63 TGIPNV-RWFGVEGD----YNVLVMDLLG---------------------PSLEDLFNFC 96
PN+ R +G D Y +L LG L + ++C
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 97 ------SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASM 150
R + + +L+ + + I DFG + H P L GT Y
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRAALCGTLDYLPP 175
Query: 151 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 183
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIK 38
R+IG GSFG +Y +++ +E VAIK
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIK 85
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 99
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 100 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 150
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 80
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 81 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 131
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MXGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 65
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 66 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 116
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 16/112 (14%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVK----------TKHPQLLYESKL 55
+++++G +GSG FG +Y G + N VAIK +E + T+ P + L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV--LL 66
Query: 56 YRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 67 KKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 116
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 48/213 (22%)
Query: 13 RKIGSGSFGEIYLGTNI---QTNEEVAIKLENVKTKHPQL---LYESKLYRILQGGTGIP 66
R IG G FG +Y G I Q + AIK + T+ Q+ L E L R G P
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMR----GLNHP 82
Query: 67 NV-RWFGV----EGDYNVLVM-----DLL--------GPSLEDLFN-------------- 94
NV G+ EG +VL+ DLL P+++DL +
Sbjct: 83 NVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 95 --FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNT 152
F R L+ + ++ V + DFGLA RD ++ +++++ ++ ++ +
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLA---RDILDREYYSVQQHRHARLPVKWTALES 199
Query: 153 HLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGL 184
+ + D+ S G +L L RG+ P++ +
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI 232
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 93
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 94 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 144
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 93
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 94 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 144
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 112
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 113 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 163
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 93
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 94 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 144
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 92
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 93 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 143
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 107
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 108 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 158
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 92
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 93 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 143
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 92
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 93 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 143
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 93
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 94 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 144
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 64
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 65 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 115
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 92
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 93 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 143
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MXGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 65
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 66 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 116
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 67
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 68 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 181
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-------------------LENVKT 44
++G+ + LG +G G+FG++ +G + T +VA+K ++N+K
Sbjct: 9 KIGH-YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 45 -KHPQLLYESKLYRILQGGTGIPNVR----------WFGVEGDYNVLVMDLLGPSLEDLF 93
+HP ++ KLY+++ T V + G + L +
Sbjct: 68 FRHPHII---KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV 124
Query: 94 NFCSRKLSL------KTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 147
++C R + + + VL+ A I DFGL+ D ++ G+ Y
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--------LRDSCGSPNY 176
Query: 148 ASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPW 181
A+ G + D+ S G +L L G+LP+
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 107
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 108 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 158
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 43/201 (21%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFG 72
+IG GSFGE++ G + +T + VAIK+ +++ ++ + +L +++G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 73 --VEGDYNVLVMDLL--GPSLE-------DLFNFCS-------------------RKLSL 102
++G ++M+ L G +L+ D F + R +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKA 148
Query: 103 KTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRD 162
VL+ V + DFG+A + DT ++ GT + + I+QS D
Sbjct: 149 ANVLLSEQGDVKLADFGVAGQLTDTQIKRN-------TFVGTPFWMAPEV---IQQSAYD 198
Query: 163 ---DLESLGYVLMYFLRGSLP 180
D+ SLG + +G P
Sbjct: 199 SKADIWSLGITAIELAKGEPP 219
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 87
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 88 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 138
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MXGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 100/279 (35%), Gaps = 66/279 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYES-------------KL 55
+L +K+G+G FGE+++G + +VA+K T Q E +L
Sbjct: 14 IKLVKKLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRL 72
Query: 56 YRILQGGTGIPNVRWFGVEGD-YNVLVMD----LLGPSLEDLF-------------NFCS 97
Y ++ I + F +G + L D +L P L D N+
Sbjct: 73 YAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 132
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKN--LTGTARYASMNTHLG 155
R L VL+ M I DFGLA+ D RE + TA A
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTA----REGAKFPIKWTAPEAINFGCFT 188
Query: 156 IEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY-- 212
I + ++ S G +L + G +P+ G + + AL +GY
Sbjct: 189 I----KSNVWSFGILLYEIVTYGKIPYPG---------------RTNADVMSALSQGYRM 229
Query: 213 ------PTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E C + +++P + YL+ + D +
Sbjct: 230 PRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFY 268
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKL 39
KIG GSFGE++ G + +T + VAIK+
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKI 54
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 60
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 61 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 111
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVA 36
+ ++L RK+G G + E++ NI NE+VA
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVA 66
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 60
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 61 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 111
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYESK 54
+++++G +GSG FG +Y G + N VAIK L N T+ P +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-GTRVPMEVV--L 60
Query: 55 LYRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
L ++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 61 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 111
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MXGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 16/112 (14%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVK----------TKHPQLLYESKL 55
+++++G +GSG FG +Y G + N VAIK +E + T+ P + L
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV--LL 64
Query: 56 YRILQGGTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
++ G +G+ + WF D VL+++ P ++DLF+F + + +L+ L
Sbjct: 65 KKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEEL 114
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKL 39
KIG GSFGE++ G + +T + VAIK+
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKI 39
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 50/207 (24%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLEN-------------------VKTKHPQLLYESKL 55
+G GSFGE+ + T +E A+K+ N K HP ++ KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM---KL 86
Query: 56 YRILQGGTG----------------IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK 99
+ IL+ + I + F ++ G + N R
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 100 LSLKTVLMLA---DQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGI 156
L + +L+ + D + IIDFGL+ ++ + K+ GTA Y + G
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--------KDRIGTAYYIAPEVLRGT 198
Query: 157 EQSRRDDLESLGYVLMYFLRGSLPWQG 183
+ D+ S G +L L G+ P+ G
Sbjct: 199 -YDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKL 39
KIG GSFGE++ G + +T + VAIK+
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKI 39
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G++GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV- 67
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 68 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MXGTLPYVAPELLKR 181
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 96/281 (34%), Gaps = 71/281 (25%)
Query: 9 FRLGRKIGSGSFGEIYLG--------------------------TNI--QTNEEVAIKLE 40
+L ++G+G FGE+++G N+ Q + ++L
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 41 NVKTKHP-----QLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF 95
V T+ P + + L L+ +GI + ++ G + + N+
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNY 140
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKN--LTGTARYASMNTH 153
R L +L+ I DFGLA+ D RE + TA A
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAINYGT 196
Query: 154 LGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 212
I + D+ S G +L + G +P+ G+ I+ L RGY
Sbjct: 197 FTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLERGY 237
Query: 213 --------PTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E C R +D+P + YL+ + D F
Sbjct: 238 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 278
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKL 39
KIG GSFGE++ G + +T + VAIK+
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKI 59
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 85/215 (39%), Gaps = 49/215 (22%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-------------------LENVKT 44
++G+ + LG +G G+FG++ +G + T +VA+K ++N+K
Sbjct: 9 KIGH-YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 45 -KHPQLLYESKLYRILQGGTGIPNVR----------WFGVEGDYNVLVMDLLGPSLEDLF 93
+HP ++ KLY+++ T V + G + L +
Sbjct: 68 FRHPHII---KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV 124
Query: 94 NFCSRKLSL------KTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 147
++C R + + + VL+ A I DFGL+ D + G+ Y
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--------LRTSCGSPNY 176
Query: 148 ASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPW 181
A+ G + D+ S G +L L G+LP+
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 96/281 (34%), Gaps = 71/281 (25%)
Query: 9 FRLGRKIGSGSFGEIYLG--------------------------TNI--QTNEEVAIKLE 40
+L ++G+G FGE+++G N+ Q + ++L
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 41 NVKTKHP-----QLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF 95
V T+ P + + L L+ +GI + ++ G + + N+
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNY 135
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKN--LTGTARYASMNTH 153
R L +L+ I DFGLA+ D RE + TA A
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAINYGT 191
Query: 154 LGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 212
I + D+ S G +L + G +P+ G+ I+ L RGY
Sbjct: 192 FTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLERGY 232
Query: 213 --------PTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E C R +D+P + YL+ + D F
Sbjct: 233 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 273
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 96/281 (34%), Gaps = 71/281 (25%)
Query: 9 FRLGRKIGSGSFGEIYLG--------------------------TNI--QTNEEVAIKLE 40
+L ++G+G FGE+++G N+ Q + ++L
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 41 NVKTKHP-----QLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF 95
V T+ P + + L L+ +GI + ++ G + + N+
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNY 136
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKN--LTGTARYASMNTH 153
R L +L+ I DFGLA+ D RE + TA A
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAINYGT 192
Query: 154 LGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 212
I + D+ S G +L + G +P+ G+ I+ L RGY
Sbjct: 193 FTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLERGY 233
Query: 213 --------PTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E C R +D+P + YL+ + D F
Sbjct: 234 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 274
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 72/208 (34%), Gaps = 42/208 (20%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------ENVK------------TKH 46
+ F +GR +G G FG +YL Q +A+K+ E V+ +H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 47 PQLLY-------ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFC--- 96
P +L ++Y +L+ + G ++ L D ++C
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R + + +LM + I DFG + H P + + GT Y
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWS---------VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 154 LGIEQSRRDDLESLGYVLMYFLRGSLPW 181
G + DL G + FL G P+
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 72/208 (34%), Gaps = 42/208 (20%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--------ENVK------------TKH 46
+ F +GR +G G FG +YL Q +A+K+ E V+ +H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 47 PQLLY-------ESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFC--- 96
P +L ++Y +L+ + G ++ L D ++C
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R + + +LM + I DFG + H P + + GT Y
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWS---------VHAPSLRRRXMCGTLDYLPPEMI 185
Query: 154 LGIEQSRRDDLESLGYVLMYFLRGSLPW 181
G + DL G + FL G P+
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 30/204 (14%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYR--ILQGGTG 64
+ F +GR +G G FG +YL +++ VA+K+ K++ + E +L R +Q
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVL-FKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 65 IPNV-RWFGVEGD----YNVLVMDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMVYIID 117
PN+ R + D Y +L G ++L C+ +M LAD ++Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYC-- 139
Query: 118 FGLAKKYRDTSTHQ------------------HIPYRENKNLTGTARYASMNTHLGIEQS 159
G +RD H P K + GT Y G +
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHN 199
Query: 160 RRDDLESLGYVLMYFLRGSLPWQG 183
+ DL +G + L G+ P++
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFES 223
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 99/281 (35%), Gaps = 71/281 (25%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
+L ++G+G FGE+++G + +VA+K + P L E+ L + LQ
Sbjct: 11 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL--- 66
Query: 68 VRWFGV----------EGDYNVLVMDLL----------------------GPSLEDLFNF 95
VR + V E N ++D L G + + N+
Sbjct: 67 VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 126
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKN--LTGTARYASMNTH 153
R L +L+ I DFGLA+ D RE + TA A
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAINYGT 182
Query: 154 LGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 212
I + D+ S G +L + G +P+ G+ I+ L RGY
Sbjct: 183 FTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLERGY 223
Query: 213 --------PTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E C R +D+P + YL+ + D F
Sbjct: 224 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 264
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTG 64
V + + + IG GS+G +YL + T + VAIK N + + L + K RIL+ T
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN---RMFEDLIDCK--RILREITI 78
Query: 65 IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAD 110
+ ++ DY + + DL+ P +DL F L VL +AD
Sbjct: 79 LNRLK-----SDYIIRLYDLIIP--DDLLKFD----ELYIVLEIAD 113
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 81/218 (37%), Gaps = 46/218 (21%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--ENVKTKHPQLLYESKLYRI 58
++PR ++ GR +G G F + Y T++ T E A K+ +++ K Q + K+
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ---KEKMSTE 92
Query: 59 LQGGTGIPNVRWFGVEG-----DYNVLVMDLL-GPSLEDLFN------------------ 94
+ + N G G D+ +V+++ SL +L
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 95 ----------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 144
R L L + + D V I DFGLA K + K+L GT
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-------KDLCGT 205
Query: 145 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 182
Y + S D+ SLG +L L G P++
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint
And Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LENVKTKHP-QLLYESKLYRILQ 60
+K+ KIG G+FGE++ + +T ++VA+K +EN K P L E K+ ++L+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2-
And Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2-
And Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2-
And Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2-
And Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2-
And Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV 42
F L +G+G++G++Y G +++T + AIK+ +V
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV 59
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 98/268 (36%), Gaps = 65/268 (24%)
Query: 13 RKIGSGSFGEIYLG-------TNIQTNEEVAIKLEN--------VKTKHPQLLYESKLYR 57
++IGSG FG ++LG I+T E A+ E+ +K HP+L+ +LY
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLV---QLYG 69
Query: 58 ILQGGTGIPNVRWF---GVEGDYNVLVMDLLGPSLEDLFNFC----------------SR 98
+ I V F G DY L E L C R
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEASVIHR 127
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L+ + L+ +Q++ + DFG+ + D Y + ++AS
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQ------YTSSTGTKFPVKWASPEVFSFSRY 181
Query: 159 SRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGYPTEF 216
S + D+ S G VLM+ F G +P++ V I R Y
Sbjct: 182 SSKSDVWSFG-VLMWEVFSEGKIPYEN------------RSNSEVVEDISTGFRLYKPRL 228
Query: 217 AS-----YFHYCRSLRFDDKPDYAYLKR 239
AS ++C R +D+P ++ L R
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSRLLR 256
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 48/206 (23%)
Query: 13 RKIGSGSFGEIYLG-------TNIQTNEEVAIKLEN--------VKTKHPQLLYESKLYR 57
++IGSG FG ++LG I+T E A+ E+ +K HP+L+ +LY
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLV---QLYG 70
Query: 58 ILQGGTGIPNVRWF---GVEGDYNVLVMDLLGPSLEDLFNFC----------------SR 98
+ I V F G DY L E L C R
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEACVIHR 128
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L+ + L+ +Q++ + DFG+ + D Y + ++AS
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQ------YTSSTGTKFPVKWASPEVFSFSRY 182
Query: 159 SRRDDLESLGYVLMY--FLRGSLPWQ 182
S + D+ S G VLM+ F G +P++
Sbjct: 183 SSKSDVWSFG-VLMWEVFSEGKIPYE 207
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human
P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LENVKTKHP-QLLYESKLYRILQ 60
+K+ KIG G+FGE++ + +T ++VA+K +EN K P L E K+ ++L+
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 74
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LENVKTKHP-QLLYESKLYRILQ 60
+K+ KIG G+FGE++ + +T ++VA+K +EN K P L E K+ ++L+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LENVKTKHP-QLLYESKLYRILQ 60
+K+ KIG G+FGE++ + +T ++VA+K +EN K P L E K+ ++L+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 81/218 (37%), Gaps = 46/218 (21%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--ENVKTKHPQLLYESKLYRI 58
++PR ++ GR +G G F + Y T++ T E A K+ +++ K Q + K+
Sbjct: 20 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ---KEKMSTE 76
Query: 59 LQGGTGIPNVRWFGVEG-----DYNVLVMDLL-GPSLEDLFN------------------ 94
+ + N G G D+ +V+++ SL +L
Sbjct: 77 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 136
Query: 95 ----------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 144
R L L + + D V I DFGLA K + K+L GT
Sbjct: 137 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-------KDLCGT 189
Query: 145 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 182
Y + S D+ SLG +L L G P++
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 41/207 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKLYRILQGGTGIP 66
+ L + +G G+ GE+ L N T E VA+K+ ++K P+ + + + +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV- 66
Query: 67 NVRWFG--VEGDYNVLVMDLLG----------------PSLEDLFN-------------F 95
V+++G EG+ L ++ P + F+
Sbjct: 67 -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLG 155
R + + +L+ + I DFGLA +R + + + NK + GT Y +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLKR 180
Query: 156 IE-QSRRDDLESLGYVLMYFLRGSLPW 181
E + D+ S G VL L G LPW
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNV 68
+ L IG+G F ++ L +I T E VAIK+ + T S L RI + N+
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNT------LGSDLPRIKTEIEALKNL 65
Query: 69 RWFGVEGDYNVL 80
R + Y+VL
Sbjct: 66 RHQHICQLYHVL 77
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 98/268 (36%), Gaps = 65/268 (24%)
Query: 13 RKIGSGSFGEIYLG-------TNIQTNEEVAIKLEN--------VKTKHPQLLYESKLYR 57
++IGSG FG ++LG I+T E A+ E+ +K HP+L+ +LY
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLV---QLYG 69
Query: 58 ILQGGTGIPNVRWF---GVEGDYNVLVMDLLGPSLEDLFNFC----------------SR 98
+ I V F G DY L E L C R
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEACVIHR 127
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L+ + L+ +Q++ + DFG+ + D Y + ++AS
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQ------YTSSTGTKFPVKWASPEVFSFSRY 181
Query: 159 SRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGYPTEF 216
S + D+ S G VLM+ F G +P++ V I R Y
Sbjct: 182 SSKSDVWSFG-VLMWEVFSEGKIPYEN------------RSNSEVVEDISTGFRLYKPRL 228
Query: 217 AS-----YFHYCRSLRFDDKPDYAYLKR 239
AS ++C R +D+P ++ L R
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSRLLR 256
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLLYESKLYRILQGG 62
++++L ++G G+F + I T +E A K+ N K H +L E+++ R+L+
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 63 TGIPNVRWFGVEGDYNVLVMDLL--GPSLEDL 92
+ EG ++ LV DL+ G ED+
Sbjct: 64 NIVRLHDSISEEG-FHYLVFDLVTGGELFEDI 94
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLLYESKLYRILQGG 62
++++L IG G+F + + T E A K+ N K H +L E+++ R+L+
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 63 TGIPNVRWFGVEGDYNVLVMDLL--GPSLEDL 92
+ EG ++ LV DL+ G ED+
Sbjct: 64 NIVRLHDSISEEG-FHYLVFDLVTGGELFEDI 94
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLLYESKLYRILQGG 62
++++L ++G G+F + I T +E A K+ N K H +L E+++ R+L+
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 63 TGIPNVRWFGVEGDYNVLVMDLL--GPSLEDL 92
+ EG ++ LV DL+ G ED+
Sbjct: 64 NIVRLHDSISEEG-FHYLVFDLVTGGELFEDI 94
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 48/206 (23%)
Query: 13 RKIGSGSFGEIYLG-------TNIQTNEEVAIKLEN--------VKTKHPQLLYESKLYR 57
++IGSG FG ++LG I+T E A+ E+ +K HP+L+ +LY
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLV---QLYG 72
Query: 58 ILQGGTGIPNVRWF---GVEGDYNVLVMDLLGPSLEDLFNFC----------------SR 98
+ I V F G DY L E L C R
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEACVIHR 130
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L+ + L+ +Q++ + DFG+ + D Y + ++AS
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQ------YTSSTGTKFPVKWASPEVFSFSRY 184
Query: 159 SRRDDLESLGYVLMY--FLRGSLPWQ 182
S + D+ S G VLM+ F G +P++
Sbjct: 185 SSKSDVWSFG-VLMWEVFSEGKIPYE 209
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 96/281 (34%), Gaps = 71/281 (25%)
Query: 9 FRLGRKIGSGSFGEIYLG--------------------------TNI--QTNEEVAIKLE 40
+L ++G+G FGE+++G N+ Q + ++L
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 41 NVKTKHP-----QLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF 95
V T+ P + + L L+ +GI + ++ G + + N+
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNY 130
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKN--LTGTARYASMNTH 153
R L +L+ I DFGLA+ D RE + TA A
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAINYGT 186
Query: 154 LGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 212
I + D+ S G +L + G +P+ G+ I+ L RGY
Sbjct: 187 FTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLERGY 227
Query: 213 --------PTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E C R +D+P + YL+ + D F
Sbjct: 228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 48/206 (23%)
Query: 13 RKIGSGSFGEIYLG-------TNIQTNEEVAIKLEN--------VKTKHPQLLYESKLYR 57
++IGSG FG ++LG I+T E A+ E+ +K HP+L+ +LY
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLV---QLYG 67
Query: 58 ILQGGTGIPNVRWF---GVEGDYNVLVMDLLGPSLEDLFNFC----------------SR 98
+ I V F G DY L E L C R
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEACVIHR 125
Query: 99 KLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQ 158
L+ + L+ +Q++ + DFG+ + D Y + ++AS
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQ------YTSSTGTKFPVKWASPEVFSFSRY 179
Query: 159 SRRDDLESLGYVLMY--FLRGSLPWQ 182
S + D+ S G VLM+ F G +P++
Sbjct: 180 SSKSDVWSFG-VLMWEVFSEGKIPYE 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From
Yeast Snf1
Length = 274
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT 44
+GN +++ + +G GSFG++ L + T ++VA+K+ N K
Sbjct: 7 IGN-YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKV 45
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 80/218 (36%), Gaps = 46/218 (21%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--ENVKTKHPQLLYESKLYRI 58
++PR ++ GR +G G F + Y T++ T E A K+ +++ K Q + K+
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ---KEKMSTE 92
Query: 59 LQGGTGIPNVRWFGVEG-----DYNVLVMDLL-GPSLEDLFN------------------ 94
+ + N G G D+ +V+++ SL +L
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 95 ----------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 144
R L L + + D V I DFGLA K + K L GT
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-------KTLCGT 205
Query: 145 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 182
Y + S D+ SLG +L L G P++
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain
Of The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT 44
+GN +++ + +G GSFG++ L + T ++VA+K+ N K
Sbjct: 3 IGN-YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKV 41
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---ENVKTKHP------QLLYESKLYRI 58
++RLG +G G FG ++ G + +VAIK+ V P L + L+++
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 59 LQGGTGIPNV----RWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK 99
GG G P V WF + + +LV++ P+ +DLF++ + K
Sbjct: 92 GAGG-GHPGVIRLLDWFETQEGF-MLVLERPLPA-QDLFDYITEK 133
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 99/281 (35%), Gaps = 71/281 (25%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKLYRILQGGTGIPN 67
+L ++G+G FGE+++G + +VA+K + P L E+ L + LQ
Sbjct: 10 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL--- 65
Query: 68 VRWFGV----------EGDYNVLVMDLL----------------------GPSLEDLFNF 95
VR + V E N ++D L G + + N+
Sbjct: 66 VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 125
Query: 96 CSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKN--LTGTARYASMNTH 153
R L +L+ I DFGLA+ D RE + TA A
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAINYGT 181
Query: 154 LGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 212
I + D+ S G +L + G +P+ G+ I+ L RGY
Sbjct: 182 FTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLERGY 222
Query: 213 --------PTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLF 245
P E C R +D+P + YL+ + D F
Sbjct: 223 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 263
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT 44
+GN +++ + +G GSFG++ L + T ++VA+K+ N K
Sbjct: 13 IGN-YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKV 51
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT 44
+GN +++ + +G GSFG++ L + T ++VA+K+ N K
Sbjct: 12 IGN-YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKV 50
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 42/187 (22%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------------- 45
P F+ KIG G++G +Y N T E VA+K + T+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 46 --HPQLL-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN-- 94
HP ++ E+KLY + + +++ F + + L+ L L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 95 -FC------SRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLT 142
FC R L + +L+ + + + DFGLA+ + T TH+ + YR + L
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 143 GTARYAS 149
G Y++
Sbjct: 184 GCKYYST 190
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p,
With Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p,
With Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL 39
EP ++ L RK+G G F ++L ++ N VA+K+
Sbjct: 14 EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKI 51
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein
Kinase In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL 39
EP ++ L RK+G G F ++L ++ N VA+K+
Sbjct: 14 EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKI 51
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 49/215 (22%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-------------------LENVKT 44
++G+ + LG +G G+FG++ +G + T +VA+K ++N+K
Sbjct: 14 KIGH-YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 45 -KHPQLLYESKLYRILQGGTGIPNVRWFGVEG---DYNVLVMDLLGPSLEDLF------- 93
+HP ++ KLY+++ + I V + G DY L LF
Sbjct: 73 FRHPHII---KLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGV 129
Query: 94 NFCSRKLSL------KTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 147
++C R + + + VL+ A I DFGL+ D + G+ Y
Sbjct: 130 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--------LRXSCGSPNY 181
Query: 148 ASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPW 181
A+ G + D+ S G +L L G+LP+
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 80/218 (36%), Gaps = 46/218 (21%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--ENVKTKHPQLLYESKLYRI 58
++PR ++ GR +G G F + Y T++ T E A K+ +++ K Q + K+
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ---KEKMSTE 92
Query: 59 LQGGTGIPNVRWFGVEG-----DYNVLVMDLL-GPSLEDLFN------------------ 94
+ + N G G D+ +V+++ SL +L
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 95 ----------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT 144
R L L + + D V I DFGLA K + K L GT
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-------KXLCGT 205
Query: 145 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 182
Y + S D+ SLG +L L G P++
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 86/224 (38%), Gaps = 52/224 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGT--NIQTNE---EVAIKLENVKTKHPQLLYESKLYRILQGG 62
K L R++G GSFG +Y G +I E VA+K N + + +++G
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 63 TGIPNVRWFGV--EGDYNVLVMDLLG-----------------------PSLEDLFN--- 94
T VR GV +G ++VM+L+ P+L+++
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 95 -------------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNL 141
F R L+ + ++ D V I DFG+ + +T+ ++ + K L
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYR----KGGKGL 193
Query: 142 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 184
A + G+ + D+ S G VL P+QGL
Sbjct: 194 LPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 236
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYR 136
NF R L+ + VL+ D + + DFGL K+ T +P +
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK 170
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 42/187 (22%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------------- 45
P F+ KIG G++G +Y N T E VA+K + T+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 46 --HPQLL-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN-- 94
HP ++ E+KLY + + +++ F + + L+ L L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 95 -FC------SRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLT 142
FC R L + +L+ + + + DFGLA+ + T TH+ + YR + L
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 143 GTARYAS 149
G Y++
Sbjct: 184 GXKYYST 190
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYR 136
NF R L+ + VL+ D + + DFGL K+ T +P +
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK 179
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYR 136
NF R L+ + VL+ D + + DFGL K+ T +P +
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK 351
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYR 136
NF R L+ + VL+ D + + DFGL K+ T +P +
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK 164
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 52/224 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGT--NIQTNE---EVAIKLENVKTKHPQLLYESKLYRILQGG 62
K L R++G GSFG +Y G +I E VA+K N + + +++G
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 63 TGIPNVRWFGV--EGDYNVLVMDLLG-----------------------PSLEDLFN--- 94
T VR GV +G ++VM+L+ P+L+++
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 95 -------------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNL 141
F R L+ + ++ D V I DFG+ + +T + + K L
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR----KGGKGL 193
Query: 142 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 184
A + G+ + D+ S G VL P+QGL
Sbjct: 194 LPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 236
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 85/224 (37%), Gaps = 52/224 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGT--NIQTNE---EVAIKLENVKTKHPQLLYESKLYRILQGG 62
K L R++G GSFG +Y G +I E VA+K N + + +++G
Sbjct: 19 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 78
Query: 63 TGIPNVRWFGV--EGDYNVLVMDLLG-----------------------PSLEDLFN--- 94
T VR GV +G ++VM+L+ P+L+++
Sbjct: 79 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 95 -------------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNL 141
F R L+ + ++ D V I DFG+ + +T ++ + K L
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR----KGGKGL 194
Query: 142 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 184
A + G+ + D+ S G VL P+QGL
Sbjct: 195 LPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 237
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 52/224 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGT--NIQTNE---EVAIKLENVKTKHPQLLYESKLYRILQGG 62
K L R++G GSFG +Y G +I E VA+K N + + +++G
Sbjct: 15 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 74
Query: 63 TGIPNVRWFGV--EGDYNVLVMDLLG-----------------------PSLEDLFN--- 94
T VR GV +G ++VM+L+ P+L+++
Sbjct: 75 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 95 -------------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNL 141
F R L+ + ++ D V I DFG+ + +T + + K L
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR----KGGKGL 190
Query: 142 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 184
A + G+ + D+ S G VL P+QGL
Sbjct: 191 LPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 233
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 52/224 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGT--NIQTNE---EVAIKLENVKTKHPQLLYESKLYRILQGG 62
K L R++G GSFG +Y G +I E VA+K N + + +++G
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 63 TGIPNVRWFGV--EGDYNVLVMDLLG-----------------------PSLEDLFN--- 94
T VR GV +G ++VM+L+ P+L+++
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 95 -------------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNL 141
F R L+ + ++ D V I DFG+ + +T + + K L
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR----KGGKGL 193
Query: 142 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 184
A + G+ + D+ S G VL P+QGL
Sbjct: 194 LPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 236
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 85/224 (37%), Gaps = 52/224 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGT--NIQTNE---EVAIKLENVKTKHPQLLYESKLYRILQGG 62
K L R++G GSFG +Y G +I E VA+K N + + +++G
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 63 TGIPNVRWFGV--EGDYNVLVMDLLG-----------------------PSLEDLFN--- 94
T VR GV +G ++VM+L+ P+L+++
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 95 -------------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNL 141
F R L+ + ++ D V I DFG+ + +T ++ + K L
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR----KGGKGL 193
Query: 142 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 184
A + G+ + D+ S G VL P+QGL
Sbjct: 194 LPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 236
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPN 67
K+ KIG G+ G +Y ++ T +EVAI+ N++ + + L +++ + + PN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN--PN 78
Query: 68 VRWFG---VEGDYNVLVMD-LLGPSLEDLF 93
+ + + GD +VM+ L G SL D+
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPN 67
K+ KIG G+ G +Y ++ T +EVAI+ N++ + + L +++ + + PN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN--PN 78
Query: 68 VRWFG---VEGDYNVLVMD-LLGPSLEDLF 93
+ + + GD +VM+ L G SL D+
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPN 67
K+ KIG G+ G +Y ++ T +EVAI+ N++ + + L +++ + + PN
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN--PN 79
Query: 68 VRWFG---VEGDYNVLVMD-LLGPSLEDLF 93
+ + + GD +VM+ L G SL D+
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVV 109
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From
Homo Sapiens
Length = 350
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 3 PRVGNK--FRLGRKIGSGSFGEIYLGTNIQTNE 33
P GN+ ++L RK+G G + E++ NI NE
Sbjct: 32 PSWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 64
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQ--DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLTGTARYA 148
R L + +L+ + + + DFGLA+ + T TH+ + YR + L G Y+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 149 S 149
+
Sbjct: 182 T 182
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPN 67
K+ KIG G+ G +Y ++ T +EVAI+ N++ + + L +++ + + PN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN--PN 78
Query: 68 VRWFG---VEGDYNVLVMD-LLGPSLEDLF 93
+ + + GD +VM+ L G SL D+
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 85/224 (37%), Gaps = 52/224 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGT--NIQTNE---EVAIKLENVKTKHPQLLYESKLYRILQGG 62
K L R++G GSFG +Y G +I E VA+K N + + +++G
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 63 TGIPNVRWFGV--EGDYNVLVMDLLG-----------------------PSLEDLFN--- 94
T VR GV +G ++VM+L+ P+L+++
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 95 -------------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNL 141
F R L+ + ++ D V I DFG+ + +T ++ + K L
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR----KGGKGL 193
Query: 142 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 184
A + G+ + D+ S G VL P+QGL
Sbjct: 194 LPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 236
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPN 67
K+ KIG G+ G +Y ++ T +EVAI+ N++ + + L +++ + + PN
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN--PN 79
Query: 68 VRWFG---VEGDYNVLVMD-LLGPSLEDLF 93
+ + + GD +VM+ L G SL D+
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVV 109
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 85/224 (37%), Gaps = 52/224 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGT--NIQTNE---EVAIKLENVKTKHPQLLYESKLYRILQGG 62
K L R++G GSFG +Y G +I E VA+K N + + +++G
Sbjct: 17 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 76
Query: 63 TGIPNVRWFGV--EGDYNVLVMDLLG-----------------------PSLEDLFN--- 94
T VR GV +G ++VM+L+ P+L+++
Sbjct: 77 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 95 -------------FCSRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNL 141
F R L+ + ++ D V I DFG+ + +T ++ + K L
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR----KGGKGL 192
Query: 142 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 184
A + G+ + D+ S G VL P+QGL
Sbjct: 193 LPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 235
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 3 PRVGNK--FRLGRKIGSGSFGEIYLGTNIQTNE 33
P GN+ ++L RK+G G + E++ NI NE
Sbjct: 37 PSWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 69
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 71/185 (38%), Gaps = 50/185 (27%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 50 L-------YESKLYRILQ-------------GGTGIPNVRWFGVEGDYNVLVMDLLGPSL 89
+ E+KLY + + TGIP + Y L L G S
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP----LPLIKSY--LFQLLQGLSF 118
Query: 90 EDLFNFCSRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLTGT 144
R L + +L+ + + + DFGLA+ + T TH+ + YR + L G
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 145 ARYAS 149
Y++
Sbjct: 179 KYYST 183
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTH-QHIPYRENKNLTGTARYASMNTHLGI 156
R L +++ +D + I+DFGLA R ST+ PY T Y + LG+
Sbjct: 148 RDLKPSNIVVKSDCTLKILDFGLA---RTASTNFMMTPY------VVTRYYRAPEVILGM 198
Query: 157 EQSRRDDLESLGYVLMYFLRGSLPWQG 183
D+ S+G ++ ++GS+ +QG
Sbjct: 199 GYKENVDIWSVGCIMGELVKGSVIFQG 225
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNV 68
F + K+G GS+G +Y + +T + VAIK V++ +++ E I+Q V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKE---ISIMQQCDSPHVV 87
Query: 69 RWFG 72
+++G
Sbjct: 88 KYYG 91
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With
Tyrphostin Ag99
Length = 325
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEV 35
+ + + RK+G G + E++ G N+ NE+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKC 59
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEV 35
+ + + RK+G G + E++ G N+ NE+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKC 59
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In
Complex With Two Beta Peptides Mimicking The
Architecture Of The Tetrameric Protein Kinase Ck2
Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In
Complex With Two Beta Peptides Mimicking The
Architecture Of The Tetrameric Protein Kinase Ck2
Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In
Complex With Two Beta Peptides Mimicking The
Architecture Of The Tetrameric Protein Kinase Ck2
Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In
Complex With Two Beta Peptides Mimicking The
Architecture Of The Tetrameric Protein Kinase Ck2
Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive
Inhibitor Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of
The Catalytic Subunit Of Protein Kinase Ck2 From Zea
Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEV 35
+ + + RK+G G + E++ G N+ NE+
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKC 60
>pdb|4GSK|A Chain A, Crystal Structure Of An Atg7-Atg10 Crosslinked Complex
pdb|4GSK|B Chain B, Crystal Structure Of An Atg7-Atg10 Crosslinked Complex
Length = 615
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 87 PSLEDLFNFCSRKLSL---KTVLML-ADQMVYIIDFGLAKK-----YRDTSTHQHIPYRE 137
PSL+ LF+ C + + K V +L AD + D + +K RDTST +++P
Sbjct: 161 PSLKGLFSKCQKWFDVNYSKWVCILDADDEIVNYDKSIIRKTKVLAIRDTSTMENVPSAL 220
Query: 138 NKNLTGTARY 147
KN +Y
Sbjct: 221 TKNFLSVLQY 230
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In
Complex With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEV 35
+ + + RK+G G + E++ G N+ NE+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKC 59
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEV 35
+ + + RK+G G + E++ G N+ NE+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKC 59
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 34/149 (22%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKL------ENVKTK------------HPQLL-- 50
LG +IG G+FGE++ G N VA+K ++K K HP ++
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 51 -----YESKLY---RILQGGTGIPNVRWFGVEGDYNVLVMDLLGPS---LEDLFNFCS-- 97
+ +Y ++QGG + +R G L + ++G + +E L + C
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL-LQMVGDAAAGMEYLESKCCIH 236
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAKKYRD 126
R L+ + L+ ++ I DFG++++ D
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEV 35
+ + + RK+G G + E++ G N+ NE+
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKC 60
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 34/149 (22%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKL------ENVKTK------------HPQLL-- 50
LG +IG G+FGE++ G N VA+K ++K K HP ++
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 51 -----YESKLY---RILQGGTGIPNVRWFGVEGDYNVLVMDLLGPS---LEDLFNFCS-- 97
+ +Y ++QGG + +R G L + ++G + +E L + C
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL-LQMVGDAAAGMEYLESKCCIH 236
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAKKYRD 126
R L+ + L+ ++ I DFG++++ D
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEV 35
+ + + RK+G G + E++ G N+ NE+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKC 59
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL 39
E ++G + RK+GSG++GE+ L + E AIK+
Sbjct: 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKV 68
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEV 35
+ + + RK+G G + E++ G N+ NE+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKC 59
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEV 35
+ + + RK+G G + E++ G N+ NE+
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNEKC 61
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLTGTARYA 148
R L + +L+ + + + DFGLA+ + T TH+ + YR + L G Y+
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 186
Query: 149 S 149
+
Sbjct: 187 T 187
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK 38
++F++ R G G+FG + LG T VAIK
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK 54
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel
Macrocyclic Pyrazolo[1,5-A] [1,3,5]triazine Compounds
As Potent Inhibitors Of Protein Kinase Ck2 And Their
Anticancer Activities
Length = 352
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEV 35
+ + + RK+G G + E++ G N+ NE+
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNEKC 80
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLTGTARYA 148
R L + +L+ + + + DFGLA+ + T TH+ + YR + L G Y+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 149 S 149
+
Sbjct: 182 T 182
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 45/199 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R L + +L+ + + + DFGLA+ + +P R + T Y +
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPEIL 178
Query: 154 LGIE-QSRRDDLESLGYVL 171
LG + S D+ SLG +
Sbjct: 179 LGCKYYSTAVDIWSLGCIF 197
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLTGTARYA 148
R L + +L+ + + + DFGLA+ + T TH+ + YR + L G Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 149 S 149
+
Sbjct: 183 T 183
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLTGTARYA 148
R L + +L+ + + + DFGLA+ + T TH+ + YR + L G Y+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 149 S 149
+
Sbjct: 182 T 182
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLTGTARYA 148
R L + +L+ + + + DFGLA+ + T TH+ + YR + L G Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 149 S 149
+
Sbjct: 183 T 183
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLTGTARYA 148
R L + +L+ + + + DFGLA+ + T TH+ + YR + L G Y+
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 149 S 149
+
Sbjct: 184 T 184
>pdb|3T7F|A Chain A, Atg8 Transfer From Atg7 To Atg3: A Distinctive E1-E2
Architecture And Mechanism In The Autophagy Pathway
Length = 291
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 87 PSLEDLFNFCSRKLSL---KTVLML-ADQMVYIIDFGLAKK-----YRDTSTHQHIPYRE 137
PSL+ LF+ C + + K V +L AD + D + +K RDTST +++P
Sbjct: 161 PSLKGLFSKCQKWFDVNYSKWVCILDADDEIVNYDKCIIRKTKVLAIRDTSTXENVPSAL 220
Query: 138 NKNLTGTARY 147
KN +Y
Sbjct: 221 TKNFLSVLQY 230
>pdb|3RUJ|A Chain A, Crystal Structure Of N-Terminal Region Of Yeast Atg7
Length = 296
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 87 PSLEDLFNFCSRKLSL---KTVLML-ADQMVYIIDFGLAKK-----YRDTSTHQHIPYRE 137
PSL+ LF+ C + + K V +L AD + D + +K RDTST +++P
Sbjct: 161 PSLKGLFSKCQKWFDVNYSKWVCILDADDEIVNYDKCIIRKTKVLAIRDTSTXENVPSAL 220
Query: 138 NKNLTGTARY 147
KN +Y
Sbjct: 221 TKNFLSVLQY 230
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKY---RDTSTHQHIP--YRENKNLTGTARYA 148
R L + +L+ + + + DFGLA+ + T TH+ + YR + L G Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 149 S 149
+
Sbjct: 183 T 183
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKL 39
+G GSFG++ L T+ +T ++VA+K
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKF 41
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 45/199 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + + +++ F + + L+ L L FC
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSM--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R L + +L+ + + + DFGLA+ + +P R + T Y +
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPEIL 178
Query: 154 LGIE-QSRRDDLESLGYVL 171
LG + S D+ SLG +
Sbjct: 179 LGCKYYSTAVDIWSLGCIF 197
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 94 NFCSRKLSLKTVLMLADQMVYIIDFGLAKK 123
NF R L+ + ++ D V + DFGL+KK
Sbjct: 167 NFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 45/199 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + + +++ F + + L+ L L FC
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSM--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R L + +L+ + + + DFGLA+ + +P R + T Y +
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPEIL 176
Query: 154 LGIE-QSRRDDLESLGYVL 171
LG + S D+ SLG +
Sbjct: 177 LGCKYYSTAVDIWSLGCIF 195
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At
Ph 8.5
Length = 328
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNE 61
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium
Parvum In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium
Parvum In Complex With Indirubin E804
Length = 383
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--LENVKTKHPQLLYESKLYRILQGGTGI 65
K+ LG+ +G+GSFG + +I++ + A+K L++ + K+ +L + ++L I
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNREL----DIMKVLDHVNII 63
Query: 66 PNVRWFGVEGD 76
V +F GD
Sbjct: 64 KLVDYFYTTGD 74
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAK-----KYRDTSTHQHIPYRENKNLTGTARYASMNT 152
R L+ + VL+ D ++ I DFGLA+ Y +T+ +P K + A + + T
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYT 271
Query: 153 HLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 184
H + D+ S G +L F G P+ G+
Sbjct: 272 H-------QSDVWSFGVLLWEIFTLGGSPYPGV 297
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At
Ph 6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At
Ph 6.5
Length = 336
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNE 62
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of
Human Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNE 62
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 106 LMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRD--- 162
++ D M+ +IDFG+A + + +T + GT Y + SR +
Sbjct: 142 FLIVDGMLKLIDFGIANQMQPDTTS-----VVKDSQVGTVNYMPPEAIKDMSSSRENGKS 196
Query: 163 --------DLESLGYVLMYFLRGSLPWQGL 184
D+ SLG +L Y G P+Q +
Sbjct: 197 KSKISPKSDVWSLGCILYYMTYGKTPFQQI 226
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex
With The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit With The
Atp-competitive Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit With The
Atp-competitive Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 106 LMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRD--- 162
++ D M+ +IDFG+A + + +T + GT Y + SR +
Sbjct: 186 FLIVDGMLKLIDFGIANQMQPDTTS-----VVKDSQVGTVNYMPPEAIKDMSSSRENGKS 240
Query: 163 --------DLESLGYVLMYFLRGSLPWQGL 184
D+ SLG +L Y G P+Q +
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 106 LMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRD--- 162
++ D M+ +IDFG+A + + +T + GT Y + SR +
Sbjct: 186 FLIVDGMLKLIDFGIANQMQPDTTS-----VVKDSQVGTVNYMPPEAIKDMSSSRENGKS 240
Query: 163 --------DLESLGYVLMYFLRGSLPWQGL 184
D+ SLG +L Y G P+Q +
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE 33
+ ++L RK+G G + E++ NI NE
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNE 68
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK 38
K+ KIG G++G ++ N +T+E VA+K
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALK 33
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 106 LMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRD--- 162
++ D M+ +IDFG+A + + +T + GT Y + SR +
Sbjct: 138 FLIVDGMLKLIDFGIANQMQPDTTS-----VVKDSQVGTVNYMPPEAIKDMSSSRENGKS 192
Query: 163 --------DLESLGYVLMYFLRGSLPWQGL 184
D+ SLG +L Y G P+Q +
Sbjct: 193 KSKISPKSDVWSLGCILYYMTYGKTPFQQI 222
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAK-----KYRDTSTHQHIPYRENKNLTGTARYASMNT 152
R L+ + VL+ D ++ I DFGLA+ Y +T+ +P K + A + + T
Sbjct: 166 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYT 222
Query: 153 HLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 184
H + D+ S G +L F G P+ G+
Sbjct: 223 H-------QSDVWSFGVLLWEIFTLGGSPYPGV 248
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 106 LMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRD--- 162
++ D M+ +IDFG+A + + +T + GT Y + SR +
Sbjct: 139 FLIVDGMLKLIDFGIANQMQPDTTS-----VVKDSQVGTVNYMPPEAIKDMSSSRENGKS 193
Query: 163 --------DLESLGYVLMYFLRGSLPWQGL 184
D+ SLG +L Y G P+Q +
Sbjct: 194 KSKISPKSDVWSLGCILYYMTYGKTPFQQI 223
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 45/199 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + + +++ F + + L+ L L FC
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSM--DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R L + +L+ + + + DFGLA+ + +P R + T Y +
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPEIL 178
Query: 154 LGIE-QSRRDDLESLGYVL 171
LG + S D+ SLG +
Sbjct: 179 LGCKYYSTAVDIWSLGCIF 197
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAK-----KYRDTSTHQHIPYRENKNLTGTARYASMNT 152
R L+ + VL+ D ++ I DFGLA+ Y +T+ +P K + A + + T
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYT 230
Query: 153 HLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 184
H + D+ S G +L F G P+ G+
Sbjct: 231 H-------QSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 45/199 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + + +++ F + + L+ L L FC
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSM--DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R L + +L+ + + + DFGLA+ + +P R + T Y +
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPEIL 177
Query: 154 LGIE-QSRRDDLESLGYVL 171
LG + S D+ SLG +
Sbjct: 178 LGCKYYSTAVDIWSLGCIF 196
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK 38
K+ KIG G++G ++ N +T+E VA+K
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALK 33
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAK-----KYRDTSTHQHIPYRENKNLTGTARYASMNT 152
R L+ + VL+ D ++ I DFGLA+ Y +T+ +P K + A + + T
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYT 230
Query: 153 HLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 184
H + D+ S G +L F G P+ G+
Sbjct: 231 H-------QSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAK-----KYRDTSTHQHIPYRENKNLTGTARYASMNT 152
R L+ + VL+ D ++ I DFGLA+ Y +T+ +P K + A + + T
Sbjct: 163 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYT 219
Query: 153 HLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 184
H + D+ S G +L F G P+ G+
Sbjct: 220 H-------QSDVWSFGVLLWEIFTLGGSPYPGV 245
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAK-----KYRDTSTHQHIPYRENKNLTGTARYASMNT 152
R L+ + VL+ D ++ I DFGLA+ Y +T+ +P K + A + + T
Sbjct: 159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYT 215
Query: 153 HLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 184
H + D+ S G +L F G P+ G+
Sbjct: 216 H-------QSDVWSFGVLLWEIFTLGGSPYPGV 241
>pdb|1YD3|A Chain A, Crystal Structure Of The Giy-Yig N-Terminal Endonuclease
Domain Of Uvrc From Thermotoga Maritima: Point Mutant
Y43f Bound To Its Catalytic Divalent Cation
Length = 96
Score = 28.5 bits (62), Expect = 8.6, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMVYIIDFGLAKKYR 125
L P E +F L+T++++ ++ +I++ L KKYR
Sbjct: 43 FLNPQTEKVFRIGEEADELETIVVMNEREAFILEANLIKKYR 84
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 45/199 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQ--DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R L + +L+ + + + DFGLA+ + +P R + T Y +
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPEIL 178
Query: 154 LGIE-QSRRDDLESLGYVL 171
LG + S D+ SLG +
Sbjct: 179 LGCKYYSTAVDIWSLGCIF 197
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 98 RKLSLKTVLMLADQMVYIIDFGLAK-----KYRDTSTHQHIPYRENKNLTGTARYASMNT 152
R L+ + VL+ D ++ I DFGLA+ Y +T+ +P K + A + + T
Sbjct: 167 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYT 223
Query: 153 HLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 184
H + D+ S G +L F G P+ G+
Sbjct: 224 H-------QSDVWSFGVLLWEIFTLGGSPYPGV 249
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 45/199 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R L + +L+ + + + DFGLA+ + +P R + T Y +
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPEIL 177
Query: 154 LGIE-QSRRDDLESLGYVL 171
LG + S D+ SLG +
Sbjct: 178 LGCKYYSTAVDIWSLGCIF 196
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 106 LMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRD--- 162
++ D M+ +IDFG+A + + +T + GT Y + SR +
Sbjct: 158 FLIVDGMLKLIDFGIANQMQPDTTS-----VVKDSQVGTVNYMPPEAIKDMSSSRENGKS 212
Query: 163 --------DLESLGYVLMYFLRGSLPWQGL 184
D+ SLG +L Y G P+Q +
Sbjct: 213 KSKISPKSDVWSLGCILYYMTYGKTPFQQI 242
>pdb|1YD4|A Chain A, Crystal Structure Of The Giy-Yig N-Terminal Endonuclease
Domain Of Uvrc From Thermotoga Maritima: Point Mutant
Y29f Bound To Its Catalytic Divalent Cation
Length = 96
Score = 28.1 bits (61), Expect = 9.7, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 85 LGPSLEDLFNFCSRKLSLKTVLMLADQMVYIIDFGLAKKYR 125
L P E +F L+T++++ ++ +I++ L KKYR
Sbjct: 44 LNPQTEKVFRIGEEADELETIVVMNEREAFILEANLIKKYR 84
>pdb|1YD2|A Chain A, Crystal Structure Of The Giy-Yig N-Terminal Endonuclease
Domain Of Uvrc From Thermotoga Maritima: Point Mutant
Y19f Bound To The Catalytic Divalent Cation
Length = 96
Score = 28.1 bits (61), Expect = 9.7, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 85 LGPSLEDLFNFCSRKLSLKTVLMLADQMVYIIDFGLAKKYR 125
L P E +F L+T++++ ++ +I++ L KKYR
Sbjct: 44 LNPQTEKVFRIGEEADELETIVVMNEREAFILEANLIKKYR 84
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 45/199 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R L + +L+ + + + DFGLA+ + +P R + T Y +
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYRAPEIL 176
Query: 154 LGIE-QSRRDDLESLGYVL 171
LG + S D+ SLG +
Sbjct: 177 LGCKYYSTAVDIWSLGCIF 195
>pdb|1YD5|A Chain A, Crystal Structure Of The Giy-Yig N-Terminal Endonuclease
Domain Of Uvrc From Thermotoga Maritima: Point Mutant
N88a Bound To Its Catalytic Divalent Cation
Length = 96
Score = 28.1 bits (61), Expect = 9.9, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 85 LGPSLEDLFNFCSRKLSLKTVLMLADQMVYIIDFGLAKKYR 125
L P E +F L+T++++ ++ +I++ L KKYR
Sbjct: 44 LNPQTEKVFRIGEEADELETIVVMNEREAFILEANLIKKYR 84
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 45/199 (22%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------------------HPQL 49
F+ KIG G++G +Y N T E VA+K + T+ HP +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 50 L-------YESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN---FC--- 96
+ E+KLY + + +++ F + + L+ L L FC
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 97 ---SRKLSLKTVLMLADQMVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTH 153
R L + +L+ + + + DFGLA+ + +P R + T Y +
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPEIL 178
Query: 154 LGIE-QSRRDDLESLGYVL 171
LG + S D+ SLG +
Sbjct: 179 LGCKYYSTAVDIWSLGCIF 197
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,871,268
Number of Sequences: 62578
Number of extensions: 452823
Number of successful extensions: 2182
Number of sequences better than 100.0: 380
Number of HSP's better than 100.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 1749
Number of HSP's gapped (non-prelim): 504
length of query: 445
length of database: 14,973,337
effective HSP length: 102
effective length of query: 343
effective length of database: 8,590,381
effective search space: 2946500683
effective search space used: 2946500683
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)