Query 013331
Match_columns 445
No_of_seqs 423 out of 4384
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 02:46:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013331.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013331hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 2.3E-34 5.1E-39 241.0 12.2 181 5-193 17-199 (226)
2 KOG4412 26S proteasome regulat 100.0 2E-32 4.4E-37 229.4 13.2 163 1-169 48-211 (226)
3 PHA02791 ankyrin-like protein; 100.0 5.3E-28 1.1E-32 229.0 19.0 179 2-194 41-222 (284)
4 PHA02875 ankyrin repeat protei 100.0 1.9E-27 4.2E-32 240.0 19.4 183 2-193 13-195 (413)
5 PHA02791 ankyrin-like protein; 100.0 2.9E-27 6.2E-32 223.9 18.0 173 2-192 72-246 (284)
6 PF13962 PGG: Domain of unknow 99.9 8E-28 1.7E-32 196.5 10.3 109 248-356 1-113 (113)
7 PHA02875 ankyrin repeat protei 99.9 1.8E-26 3.9E-31 233.0 19.4 183 2-193 46-229 (413)
8 PHA02874 ankyrin repeat protei 99.9 3.1E-26 6.7E-31 232.6 19.7 183 2-192 12-216 (434)
9 KOG0509 Ankyrin repeat and DHH 99.9 8.9E-27 1.9E-31 230.3 14.0 182 2-191 55-237 (600)
10 PHA02878 ankyrin repeat protei 99.9 5E-26 1.1E-30 233.8 19.7 180 2-193 48-294 (477)
11 KOG0510 Ankyrin repeat protein 99.9 8.2E-25 1.8E-29 220.3 27.6 184 2-192 198-403 (929)
12 PHA02716 CPXV016; CPX019; EVM0 99.9 5.4E-26 1.2E-30 237.7 18.5 186 3-193 154-393 (764)
13 PHA03100 ankyrin repeat protei 99.9 6E-26 1.3E-30 233.7 18.6 183 2-191 84-308 (480)
14 PHA02859 ankyrin repeat protei 99.9 1.5E-25 3.3E-30 204.4 18.7 161 2-170 32-200 (209)
15 KOG0509 Ankyrin repeat and DHH 99.9 1.9E-26 4.1E-31 228.0 13.6 166 2-172 89-255 (600)
16 PHA02946 ankyin-like protein; 99.9 1.5E-25 3.2E-30 226.8 18.4 179 4-191 52-234 (446)
17 PHA02716 CPXV016; CPX019; EVM0 99.9 2.2E-25 4.8E-30 233.1 19.5 149 3-157 191-394 (764)
18 PHA02874 ankyrin repeat protei 99.9 4E-25 8.7E-30 224.5 20.8 164 2-170 46-231 (434)
19 PHA02878 ankyrin repeat protei 99.9 2.4E-25 5.2E-30 228.7 19.2 175 4-189 147-324 (477)
20 PHA03100 ankyrin repeat protei 99.9 2E-25 4.4E-30 229.7 18.3 182 2-193 46-244 (480)
21 PHA02989 ankyrin repeat protei 99.9 5.7E-25 1.2E-29 226.8 18.9 183 3-190 87-313 (494)
22 PHA02798 ankyrin-like protein; 99.9 6.1E-25 1.3E-29 226.3 18.2 183 4-193 89-318 (489)
23 KOG0510 Ankyrin repeat protein 99.9 1.6E-25 3.4E-30 225.4 13.1 163 2-168 236-416 (929)
24 PHA02946 ankyin-like protein; 99.9 8.3E-25 1.8E-29 221.4 18.3 180 2-192 83-269 (446)
25 PHA02795 ankyrin-like protein; 99.9 1.9E-24 4E-29 212.6 18.9 185 2-192 88-288 (437)
26 PHA03095 ankyrin-like protein; 99.9 5E-24 1.1E-28 218.9 18.7 179 3-191 96-282 (471)
27 PHA03095 ankyrin-like protein; 99.9 1.2E-23 2.6E-28 216.1 19.9 184 3-194 26-217 (471)
28 PHA02798 ankyrin-like protein; 99.9 9.3E-24 2E-28 217.5 17.9 181 3-193 50-285 (489)
29 PHA02859 ankyrin repeat protei 99.9 1.5E-23 3.2E-28 191.3 16.8 163 20-193 16-186 (209)
30 KOG0508 Ankyrin repeat protein 99.9 5.2E-24 1.1E-28 202.6 13.1 176 2-187 53-236 (615)
31 PHA02876 ankyrin repeat protei 99.9 3.5E-23 7.6E-28 221.7 19.9 163 2-169 156-348 (682)
32 PLN03192 Voltage-dependent pot 99.9 2.4E-23 5.3E-28 226.3 18.3 161 2-170 536-697 (823)
33 PHA02876 ankyrin repeat protei 99.9 7.7E-23 1.7E-27 219.1 19.2 180 5-193 288-470 (682)
34 PHA02917 ankyrin-like protein; 99.9 8.3E-23 1.8E-27 214.8 18.1 178 4-192 12-256 (661)
35 PHA02989 ankyrin repeat protei 99.9 1.5E-22 3.1E-27 208.9 19.1 184 3-194 15-213 (494)
36 KOG0514 Ankyrin repeat protein 99.9 1.2E-22 2.7E-27 187.7 11.2 163 19-190 262-431 (452)
37 PLN03192 Voltage-dependent pot 99.9 6.7E-22 1.5E-26 215.0 18.5 162 22-194 522-683 (823)
38 PHA02743 Viral ankyrin protein 99.9 3.4E-21 7.3E-26 169.3 14.4 141 20-164 15-163 (166)
39 KOG0508 Ankyrin repeat protein 99.9 6.5E-22 1.4E-26 188.4 10.2 166 20-193 37-210 (615)
40 PHA02917 ankyrin-like protein; 99.9 5.3E-21 1.1E-25 201.2 18.0 183 2-191 46-301 (661)
41 PHA02741 hypothetical protein; 99.9 7.8E-21 1.7E-25 167.6 14.6 134 17-154 13-157 (169)
42 PHA02795 ankyrin-like protein; 99.8 9.5E-21 2.1E-25 186.4 14.7 174 2-191 129-315 (437)
43 PHA02730 ankyrin-like protein; 99.8 4.1E-20 9E-25 190.3 18.1 109 5-114 21-137 (672)
44 PHA02736 Viral ankyrin protein 99.8 9.9E-21 2.1E-25 164.5 10.6 135 17-156 9-153 (154)
45 KOG4177 Ankyrin [Cell wall/mem 99.8 1.5E-20 3.2E-25 200.7 13.3 176 7-192 457-632 (1143)
46 PHA02741 hypothetical protein; 99.8 6.3E-20 1.4E-24 161.9 13.3 141 37-191 6-157 (169)
47 PHA02730 ankyrin-like protein; 99.8 1.2E-19 2.7E-24 186.8 17.1 179 2-187 55-258 (672)
48 KOG0512 Fetal globin-inducing 99.8 6.4E-20 1.4E-24 153.3 12.1 142 28-173 66-209 (228)
49 KOG0502 Integral membrane anky 99.8 1.2E-20 2.7E-25 163.3 7.2 175 3-187 74-279 (296)
50 PHA02884 ankyrin repeat protei 99.8 3.6E-19 7.8E-24 168.8 16.6 157 19-191 26-187 (300)
51 KOG0505 Myosin phosphatase, re 99.8 5.5E-20 1.2E-24 178.6 11.1 164 2-170 51-272 (527)
52 KOG4177 Ankyrin [Cell wall/mem 99.8 2.2E-20 4.8E-25 199.4 8.6 186 2-194 385-601 (1143)
53 TIGR00870 trp transient-recept 99.8 2.8E-19 6.1E-24 193.2 14.0 180 2-191 28-242 (743)
54 TIGR00870 trp transient-recept 99.8 1.2E-17 2.6E-22 180.6 26.5 177 2-191 64-282 (743)
55 PHA02743 Viral ankyrin protein 99.8 5.2E-19 1.1E-23 155.4 12.5 139 47-194 9-156 (166)
56 KOG0502 Integral membrane anky 99.8 2.1E-19 4.5E-24 155.8 7.6 145 17-167 152-296 (296)
57 PHA02792 ankyrin-like protein; 99.8 3.2E-18 7E-23 174.6 17.5 184 2-193 117-437 (631)
58 PHA02736 Viral ankyrin protein 99.8 6.6E-19 1.4E-23 153.0 10.2 129 55-192 13-152 (154)
59 KOG0512 Fetal globin-inducing 99.8 1.7E-18 3.7E-23 144.8 10.9 135 2-140 74-209 (228)
60 KOG0195 Integrin-linked kinase 99.8 4.3E-19 9.4E-24 159.6 7.0 133 33-169 8-140 (448)
61 KOG3676 Ca2+-permeable cation 99.8 7.5E-17 1.6E-21 164.1 23.9 161 20-188 138-330 (782)
62 KOG0505 Myosin phosphatase, re 99.8 6.6E-19 1.4E-23 171.2 7.8 133 3-140 85-275 (527)
63 KOG0507 CASK-interacting adapt 99.8 2.9E-18 6.3E-23 172.2 10.8 181 2-191 60-246 (854)
64 PHA02884 ankyrin repeat protei 99.8 8.7E-18 1.9E-22 159.4 13.5 141 1-153 43-186 (300)
65 PHA02792 ankyrin-like protein; 99.7 4.8E-17 1E-21 166.1 17.2 182 3-192 194-479 (631)
66 cd00204 ANK ankyrin repeats; 99.7 2E-16 4.4E-21 131.0 14.6 125 20-149 2-126 (126)
67 KOG3676 Ca2+-permeable cation 99.7 7.1E-16 1.5E-20 157.1 21.2 148 2-151 157-330 (782)
68 KOG0507 CASK-interacting adapt 99.7 4.6E-17 9.9E-22 163.7 9.4 167 19-194 43-217 (854)
69 KOG0195 Integrin-linked kinase 99.7 1.2E-16 2.6E-21 143.9 9.7 116 17-137 26-141 (448)
70 PF12796 Ank_2: Ankyrin repeat 99.7 6.3E-16 1.4E-20 121.1 10.9 89 63-159 1-89 (89)
71 KOG0514 Ankyrin repeat protein 99.7 4.3E-16 9.2E-21 144.7 11.3 143 3-149 280-427 (452)
72 PF12796 Ank_2: Ankyrin repeat 99.7 9.4E-16 2E-20 120.1 10.9 89 29-126 1-89 (89)
73 cd00204 ANK ankyrin repeats; 99.6 6.4E-15 1.4E-19 121.9 13.0 123 55-185 3-125 (126)
74 COG0666 Arp FOG: Ankyrin repea 99.6 5.2E-14 1.1E-18 129.0 13.7 129 20-152 68-203 (235)
75 KOG4369 RTK signaling protein 99.5 8.7E-15 1.9E-19 151.6 6.9 183 3-194 769-987 (2131)
76 COG0666 Arp FOG: Ankyrin repea 99.5 7.7E-13 1.7E-17 121.2 16.4 132 53-189 67-203 (235)
77 KOG4369 RTK signaling protein 99.5 9.3E-14 2E-18 144.2 7.5 170 22-199 754-925 (2131)
78 PF13637 Ank_4: Ankyrin repeat 99.4 2.2E-13 4.7E-18 95.9 6.2 54 25-79 1-54 (54)
79 KOG4214 Myotrophin and similar 99.4 7.2E-13 1.6E-17 99.6 7.6 100 29-134 6-105 (117)
80 KOG4214 Myotrophin and similar 99.4 8.5E-13 1.8E-17 99.2 7.7 103 62-169 5-107 (117)
81 PF13857 Ank_5: Ankyrin repeat 99.4 3.5E-13 7.6E-18 95.4 4.4 56 10-66 1-56 (56)
82 PTZ00322 6-phosphofructo-2-kin 99.4 3.8E-12 8.2E-17 135.2 11.5 108 28-137 85-196 (664)
83 PTZ00322 6-phosphofructo-2-kin 99.3 4.3E-12 9.4E-17 134.8 11.7 105 61-169 84-195 (664)
84 KOG0515 p53-interacting protei 99.3 3.8E-12 8.1E-17 123.5 9.3 114 32-149 557-672 (752)
85 KOG1710 MYND Zn-finger and ank 99.3 1E-11 2.2E-16 112.4 10.1 112 3-116 24-135 (396)
86 PF13857 Ank_5: Ankyrin repeat 99.3 4.5E-12 9.8E-17 89.7 4.0 50 120-169 7-56 (56)
87 PF13637 Ank_4: Ankyrin repeat 99.3 1.7E-11 3.6E-16 86.2 6.6 53 59-112 1-53 (54)
88 KOG0515 p53-interacting protei 99.2 2.8E-11 6E-16 117.6 9.1 122 60-187 548-673 (752)
89 KOG1710 MYND Zn-finger and ank 99.1 3.2E-10 7E-15 102.7 10.4 120 25-148 12-131 (396)
90 KOG0783 Uncharacterized conser 98.7 8E-09 1.7E-13 105.6 4.9 92 77-171 36-128 (1267)
91 KOG0818 GTPase-activating prot 98.7 4.3E-08 9.4E-13 95.0 9.3 95 20-115 122-222 (669)
92 KOG0506 Glutaminase (contains 98.7 9.3E-09 2E-13 99.2 4.7 90 24-114 505-594 (622)
93 PF13606 Ank_3: Ankyrin repeat 98.7 1.4E-08 3.1E-13 61.5 3.8 29 24-52 1-29 (30)
94 KOG0782 Predicted diacylglycer 98.7 4E-08 8.6E-13 96.6 8.8 116 30-149 871-987 (1004)
95 KOG0783 Uncharacterized conser 98.7 9.9E-09 2.2E-13 104.9 4.6 92 10-102 37-128 (1267)
96 KOG0782 Predicted diacylglycer 98.7 2.7E-08 5.9E-13 97.7 6.6 104 10-115 885-989 (1004)
97 PF00023 Ank: Ankyrin repeat H 98.6 8.2E-08 1.8E-12 59.7 4.0 30 24-53 1-30 (33)
98 PF13606 Ank_3: Ankyrin repeat 98.5 9.3E-08 2E-12 57.9 3.6 29 128-156 1-29 (30)
99 PF00023 Ank: Ankyrin repeat H 98.5 1.2E-07 2.6E-12 59.0 4.0 33 128-160 1-33 (33)
100 KOG0506 Glutaminase (contains 98.5 8E-08 1.7E-12 92.9 4.6 93 91-190 504-597 (622)
101 KOG0522 Ankyrin repeat protein 98.5 2.9E-07 6.2E-12 90.6 7.2 75 7-82 37-111 (560)
102 KOG0818 GTPase-activating prot 98.4 1.8E-06 3.9E-11 84.1 9.2 93 55-150 123-221 (669)
103 KOG0522 Ankyrin repeat protein 98.3 9.8E-07 2.1E-11 86.9 6.9 87 61-150 22-109 (560)
104 KOG0705 GTPase-activating prot 98.2 8E-06 1.7E-10 81.1 9.9 94 97-194 628-722 (749)
105 KOG0705 GTPase-activating prot 98.2 3.4E-06 7.5E-11 83.6 6.9 87 28-115 627-716 (749)
106 KOG0520 Uncharacterized conser 98.2 3.5E-06 7.7E-11 89.4 7.4 125 22-148 571-699 (975)
107 KOG0521 Putative GTPase activa 98.1 1.7E-06 3.8E-11 92.1 3.7 78 92-172 655-732 (785)
108 KOG0521 Putative GTPase activa 98.0 7E-06 1.5E-10 87.6 5.0 84 58-145 655-738 (785)
109 KOG3609 Receptor-activated Ca2 98.0 3.5E-05 7.7E-10 80.4 9.6 129 24-160 24-162 (822)
110 KOG0520 Uncharacterized conser 97.9 1.1E-05 2.3E-10 85.9 5.1 127 55-188 570-702 (975)
111 KOG0511 Ankyrin repeat protein 97.7 7.8E-05 1.7E-09 70.7 6.9 85 15-104 28-112 (516)
112 KOG2384 Major histocompatibili 97.7 8.4E-05 1.8E-09 64.2 6.1 63 122-188 5-68 (223)
113 KOG2384 Major histocompatibili 97.7 0.00012 2.5E-09 63.3 6.7 65 19-83 6-70 (223)
114 KOG3609 Receptor-activated Ca2 97.5 0.00023 4.9E-09 74.6 7.7 106 2-115 36-153 (822)
115 KOG0511 Ankyrin repeat protein 97.0 0.0018 3.8E-08 61.8 6.6 69 60-132 37-105 (516)
116 smart00248 ANK ankyrin repeats 97.0 0.0013 2.8E-08 38.0 3.8 27 25-51 2-28 (30)
117 KOG2505 Ankyrin repeat protein 96.8 0.0031 6.6E-08 62.3 6.6 64 106-169 404-470 (591)
118 smart00248 ANK ankyrin repeats 96.3 0.0072 1.6E-07 34.6 3.8 27 129-155 2-28 (30)
119 KOG2505 Ankyrin repeat protein 96.3 0.0064 1.4E-07 60.1 5.3 63 38-101 404-471 (591)
120 PF06128 Shigella_OspC: Shigel 91.4 1.1 2.4E-05 40.4 8.0 117 63-193 157-281 (284)
121 TIGR01569 A_tha_TIGR01569 plan 87.1 5.8 0.00013 34.0 9.2 32 286-317 35-66 (154)
122 PF06128 Shigella_OspC: Shigel 86.0 4.5 9.8E-05 36.6 8.0 114 29-154 157-279 (284)
123 PF11929 DUF3447: Domain of un 85.0 1.7 3.6E-05 32.4 4.3 46 28-81 9-54 (76)
124 PF11929 DUF3447: Domain of un 83.6 2.2 4.9E-05 31.7 4.5 48 61-116 8-55 (76)
125 COG4298 Uncharacterized protei 78.9 4.8 0.0001 30.1 4.5 49 296-357 14-62 (95)
126 PF14126 DUF4293: Domain of un 78.5 25 0.00054 30.0 9.6 27 307-333 59-85 (149)
127 PF03158 DUF249: Multigene fam 77.7 22 0.00049 31.2 9.0 136 26-186 47-190 (192)
128 PF05297 Herpes_LMP1: Herpesvi 76.5 0.82 1.8E-05 42.4 0.0 14 361-374 132-145 (381)
129 COG0598 CorA Mg2+ and Co2+ tra 68.3 23 0.00049 34.5 7.9 20 337-356 265-284 (322)
130 KOG4193 G protein-coupled rece 66.7 1.1E+02 0.0024 32.6 13.0 63 337-403 517-580 (610)
131 PRK11085 magnesium/nickel/coba 66.3 48 0.0011 32.1 9.6 38 337-374 259-297 (316)
132 TIGR00383 corA magnesium Mg(2+ 65.6 22 0.00048 34.3 7.3 20 337-356 261-280 (318)
133 PF06011 TRP: Transient recept 63.3 48 0.001 33.8 9.5 33 364-396 385-417 (438)
134 PF04277 OAD_gamma: Oxaloaceta 63.0 30 0.00065 25.7 6.0 30 372-401 11-40 (79)
135 PF05313 Pox_P21: Poxvirus P21 62.8 34 0.00073 29.8 6.8 37 326-362 79-115 (189)
136 PF03158 DUF249: Multigene fam 62.7 14 0.00031 32.4 4.7 81 26-114 105-191 (192)
137 COG1294 AppB Cytochrome bd-typ 58.8 1E+02 0.0022 30.2 10.3 34 246-279 195-228 (346)
138 PF10754 DUF2569: Protein of u 57.6 1.2E+02 0.0026 25.7 9.6 58 292-352 49-106 (149)
139 PF12273 RCR: Chitin synthesis 57.5 8.5 0.00018 31.9 2.4 7 365-371 2-8 (130)
140 PF07086 DUF1352: Protein of u 55.7 1.5E+02 0.0032 26.3 11.4 19 384-402 167-185 (186)
141 KOG4591 Uncharacterized conser 55.2 8.7 0.00019 34.0 2.1 14 131-144 224-237 (280)
142 PF04535 DUF588: Domain of unk 54.6 97 0.0021 26.2 8.5 34 284-317 38-71 (149)
143 KOG4783 Uncharacterized conser 52.8 1.1E+02 0.0023 23.8 8.3 25 376-400 72-97 (102)
144 KOG0513 Ca2+-independent phosp 52.5 5.6 0.00012 41.0 0.6 133 20-169 50-200 (503)
145 KOG2417 Predicted G-protein co 52.3 1E+02 0.0023 30.0 8.8 62 293-354 39-100 (462)
146 PF06695 Sm_multidrug_ex: Puta 52.3 41 0.0009 27.5 5.6 37 365-401 16-52 (121)
147 PRK09546 zntB zinc transporter 51.3 39 0.00084 32.8 6.3 19 337-355 267-285 (324)
148 PF10966 DUF2768: Protein of u 50.8 21 0.00046 24.9 3.0 21 338-358 2-22 (58)
149 PF03904 DUF334: Domain of unk 49.7 1E+02 0.0022 28.1 7.9 31 364-397 197-227 (230)
150 PF05297 Herpes_LMP1: Herpesvi 48.6 5.8 0.00013 37.0 0.0 11 317-327 67-77 (381)
151 cd07920 Pumilio Pumilio-family 46.8 1.2E+02 0.0026 29.1 9.0 117 21-141 125-249 (322)
152 PF07857 DUF1632: CEO family ( 46.6 1.8E+02 0.0038 27.3 9.4 85 260-355 2-103 (254)
153 PF06570 DUF1129: Protein of u 44.6 2.3E+02 0.005 25.4 9.8 17 258-274 81-97 (206)
154 cd07920 Pumilio Pumilio-family 43.8 1.3E+02 0.0027 28.9 8.6 151 21-171 89-246 (322)
155 PRK10714 undecaprenyl phosphat 43.8 1.9E+02 0.0041 28.0 9.8 14 385-398 288-301 (325)
156 PTZ00370 STEVOR; Provisional 42.8 11 0.00025 35.3 1.0 22 253-274 174-195 (296)
157 PRK00733 hppA membrane-bound p 42.7 2.6E+02 0.0057 29.9 10.8 14 259-272 211-224 (666)
158 PF04304 DUF454: Protein of un 41.4 76 0.0016 22.9 5.1 21 339-359 30-50 (71)
159 PF12304 BCLP: Beta-casein lik 41.2 55 0.0012 28.7 4.8 29 296-324 38-67 (188)
160 PF02705 K_trans: K+ potassium 40.4 1.5E+02 0.0032 31.0 8.6 20 255-274 331-350 (534)
161 PF09726 Macoilin: Transmembra 39.8 1.8E+02 0.0038 31.7 9.4 13 340-352 75-87 (697)
162 PRK02509 hypothetical protein; 39.2 3.9E+02 0.0084 30.1 11.8 38 258-298 187-235 (973)
163 PF11143 DUF2919: Protein of u 39.0 2.5E+02 0.0053 24.0 9.2 13 304-316 58-70 (149)
164 PF07344 Amastin: Amastin surf 37.9 2.2E+02 0.0048 24.3 8.2 39 331-370 62-100 (155)
165 PF07214 DUF1418: Protein of u 37.6 2E+02 0.0043 22.5 7.8 43 339-381 16-59 (96)
166 PF04971 Lysis_S: Lysis protei 37.3 1E+02 0.0022 22.3 4.8 26 344-369 12-37 (68)
167 KOG0513 Ca2+-independent phosp 37.0 2.4 5.2E-05 43.6 -4.8 100 24-140 105-204 (503)
168 COG4280 Predicted membrane pro 36.8 1.4E+02 0.003 26.7 6.6 24 380-403 72-95 (236)
169 PLN00151 potassium transporter 36.6 1.5E+02 0.0033 32.5 8.2 22 255-276 474-495 (852)
170 PLN00148 potassium transporter 36.1 1.9E+02 0.0042 31.6 8.9 22 255-276 397-418 (785)
171 TIGR01478 STEVOR variant surfa 36.1 33 0.00071 32.3 2.8 126 240-398 161-291 (295)
172 PF06687 SUR7: SUR7/PalI famil 35.6 1.7E+02 0.0037 26.1 7.6 16 340-355 159-174 (212)
173 PLN00149 potassium transporter 35.2 1.6E+02 0.0035 32.2 8.1 22 255-276 401-422 (779)
174 PF13903 Claudin_2: PMP-22/EMP 35.2 2.7E+02 0.0059 23.4 9.9 26 335-360 72-97 (172)
175 PRK00068 hypothetical protein; 34.6 6.4E+02 0.014 28.6 12.7 14 285-298 148-161 (970)
176 PF12805 FUSC-like: FUSC-like 34.4 4E+02 0.0087 25.1 11.7 20 364-383 70-89 (284)
177 PF03229 Alpha_GJ: Alphavirus 34.2 73 0.0016 25.6 4.0 32 371-402 88-119 (126)
178 KOG4684 Uncharacterized conser 34.0 2.3E+02 0.005 25.5 7.5 36 337-374 217-252 (275)
179 TIGR00794 kup potassium uptake 33.7 1.7E+02 0.0037 31.6 8.0 24 254-277 367-390 (688)
180 PLN00150 potassium ion transpo 33.3 1.5E+02 0.0033 32.4 7.5 22 255-276 414-435 (779)
181 KOG3359 Dolichyl-phosphate-man 33.1 6.7E+02 0.015 27.3 12.9 24 297-320 169-192 (723)
182 PF01708 Gemini_mov: Geminivir 32.8 16 0.00034 27.9 0.2 45 359-403 28-72 (91)
183 TIGR01299 synapt_SV2 synaptic 32.5 4.9E+02 0.011 28.7 11.5 9 69-77 13-21 (742)
184 KOG2887 Membrane protein invol 31.9 3.5E+02 0.0076 23.6 8.3 22 294-315 45-66 (175)
185 TIGR01666 YCCS hypothetical me 30.8 7.4E+02 0.016 27.1 12.8 31 351-381 115-145 (704)
186 KOG2568 Predicted membrane pro 30.5 4.9E+02 0.011 27.1 10.3 36 365-402 339-374 (518)
187 PF10321 7TM_GPCR_Srt: Serpent 30.5 2.6E+02 0.0056 27.1 8.1 29 255-283 148-176 (313)
188 PRK14740 kdbF potassium-transp 30.2 72 0.0016 18.7 2.5 15 377-391 11-25 (29)
189 PRK12438 hypothetical protein; 30.1 8.7E+02 0.019 27.7 13.0 14 285-298 150-163 (991)
190 PTZ00370 STEVOR; Provisional 29.6 2.5E+02 0.0054 26.7 7.4 16 378-393 267-282 (296)
191 PF09788 Tmemb_55A: Transmembr 29.6 1.5E+02 0.0033 27.5 6.0 27 325-351 196-222 (256)
192 PF01544 CorA: CorA-like Mg2+ 29.5 29 0.00063 32.7 1.5 20 337-356 237-256 (292)
193 KOG0847 Transcription factor, 28.8 34 0.00074 30.7 1.6 46 390-435 211-262 (288)
194 COG3610 Uncharacterized conser 28.7 87 0.0019 26.9 4.0 21 260-280 10-30 (156)
195 COG1380 Putative effector of m 28.6 3.4E+02 0.0074 22.5 9.3 33 365-401 89-121 (128)
196 PHA03029 hypothetical protein; 28.6 2.4E+02 0.0052 20.7 6.7 41 323-365 48-88 (92)
197 TIGR02005 PTS-IIBC-alpha PTS s 28.5 5.3E+02 0.012 27.0 10.5 21 380-400 392-412 (524)
198 PTZ00234 variable surface prot 28.5 44 0.00096 33.9 2.6 14 427-440 418-431 (433)
199 TIGR00267 conserved hypothetic 28.2 2.2E+02 0.0047 24.7 6.6 9 301-309 94-102 (169)
200 PF08006 DUF1700: Protein of u 28.1 4E+02 0.0088 23.2 12.3 7 395-401 170-176 (181)
201 COG1295 Rbn Ribonuclease BN fa 27.9 4.1E+02 0.0089 25.5 9.1 43 313-357 204-246 (303)
202 PRK13453 F0F1 ATP synthase sub 27.9 1.7E+02 0.0036 25.5 5.9 35 362-396 15-49 (173)
203 PF11188 DUF2975: Protein of u 27.9 3.3E+02 0.0071 22.0 12.1 34 321-354 55-88 (136)
204 KOG3144 Ethanolamine-P-transfe 27.7 3.2E+02 0.007 24.0 7.2 95 285-383 85-186 (196)
205 PHA02650 hypothetical protein; 27.6 92 0.002 23.2 3.3 22 373-394 56-77 (81)
206 PF01595 DUF21: Domain of unkn 27.3 4E+02 0.0087 22.8 11.1 20 409-428 156-175 (183)
207 TIGR02921 PEP_integral PEP-CTE 27.3 7.8E+02 0.017 26.2 13.8 26 255-282 106-131 (952)
208 COG3216 Uncharacterized protei 27.3 1.4E+02 0.003 26.1 5.0 40 364-403 134-174 (184)
209 MTH00213 ND6 NADH dehydrogenas 27.2 3.5E+02 0.0076 24.4 7.5 13 377-389 62-74 (239)
210 PF06570 DUF1129: Protein of u 26.9 4.6E+02 0.01 23.4 8.7 7 143-149 33-39 (206)
211 KOG4016 Synaptic vesicle prote 26.9 4.8E+02 0.01 23.6 11.2 97 259-361 29-137 (233)
212 PRK15204 undecaprenyl-phosphat 26.9 4.6E+02 0.0099 27.1 9.7 10 267-276 26-35 (476)
213 TIGR02184 Myco_arth_vir_N Myco 26.9 51 0.0011 20.1 1.6 22 253-274 9-30 (33)
214 PF06454 DUF1084: Protein of u 26.9 3.9E+02 0.0084 25.4 8.5 17 381-398 179-195 (281)
215 PF15099 PIRT: Phosphoinositid 26.8 51 0.0011 27.0 2.1 14 338-351 60-73 (129)
216 PF03699 UPF0182: Uncharacteri 26.8 6.9E+02 0.015 27.6 11.2 14 285-298 140-153 (774)
217 PF03669 UPF0139: Uncharacteri 26.7 3.3E+02 0.007 21.6 7.3 36 300-352 34-69 (103)
218 KOG4812 Golgi-associated prote 26.2 2.8E+02 0.0061 25.6 6.9 18 294-311 166-183 (262)
219 PF03188 Cytochrom_B561: Eukar 25.6 3.7E+02 0.008 21.9 9.3 21 337-357 41-61 (137)
220 PF14163 SieB: Superinfection 25.6 2.9E+02 0.0062 23.3 6.8 8 347-354 17-24 (151)
221 PF08114 PMP1_2: ATPase proteo 25.5 1.4E+02 0.0031 19.2 3.5 8 395-402 31-38 (43)
222 TIGR00801 ncs2 uracil-xanthine 25.3 6.2E+02 0.014 25.5 10.3 9 389-397 114-122 (415)
223 PF11700 ATG22: Vacuole efflux 25.0 7.7E+02 0.017 25.4 13.4 21 300-320 74-94 (477)
224 COG1687 AzlD Predicted branche 24.9 3.5E+02 0.0077 21.4 6.7 60 303-362 5-67 (106)
225 PF11023 DUF2614: Protein of u 24.8 3.7E+02 0.008 21.6 7.2 19 330-348 11-29 (114)
226 COG3763 Uncharacterized protei 24.7 1.9E+02 0.0041 21.1 4.4 14 384-397 19-32 (71)
227 PF05399 EVI2A: Ectropic viral 24.1 2.7E+02 0.0058 25.1 6.2 7 393-399 160-166 (227)
228 KOG3462 Predicted membrane pro 24.1 2.9E+02 0.0063 21.3 5.5 15 300-314 35-49 (105)
229 PF15339 Afaf: Acrosome format 24.0 1.6E+02 0.0035 25.5 4.7 13 326-338 127-139 (200)
230 smart00084 NMU Neuromedin U. N 23.9 32 0.0007 19.5 0.4 15 431-445 4-21 (26)
231 PF14851 FAM176: FAM176 family 23.5 1.3E+02 0.0029 25.7 4.2 17 380-396 33-49 (153)
232 PHA02132 hypothetical protein 23.3 2.7E+02 0.0059 20.2 5.0 21 398-418 33-53 (86)
233 COG5522 Predicted integral mem 23.3 4.8E+02 0.01 23.6 7.6 86 266-362 104-189 (236)
234 COG4758 Predicted membrane pro 23.0 6E+02 0.013 23.4 10.2 15 378-392 77-91 (235)
235 PRK14585 pgaD putative PGA bio 22.8 4.5E+02 0.0098 21.9 10.8 29 321-349 7-36 (137)
236 PF11286 DUF3087: Protein of u 22.4 5.2E+02 0.011 22.4 9.6 19 341-359 25-43 (165)
237 KOG4591 Uncharacterized conser 21.9 56 0.0012 29.1 1.6 52 90-141 219-272 (280)
238 COG3201 PnuC Nicotinamide mono 21.6 6.2E+02 0.014 23.1 9.7 46 255-316 115-160 (222)
239 PF11084 DUF2621: Protein of u 21.4 1.9E+02 0.0041 23.8 4.4 29 371-399 10-38 (141)
240 PRK14759 potassium-transportin 21.3 1.4E+02 0.0031 17.7 2.7 18 374-391 8-25 (29)
241 TIGR01667 YCCS_YHJK integral m 21.2 1.1E+03 0.024 25.8 12.6 33 350-382 114-146 (701)
242 KOG1595 CCCH-type Zn-finger pr 21.0 18 0.00039 37.0 -1.8 90 58-152 57-155 (528)
243 PHA02844 putative transmembran 20.9 1.1E+02 0.0024 22.5 2.7 28 363-391 46-73 (75)
244 PRK14397 membrane protein; Pro 20.8 6.5E+02 0.014 23.0 9.1 18 339-356 137-154 (222)
245 KOG1278 Endosomal membrane pro 20.7 1.3E+02 0.0027 31.5 4.0 105 291-402 260-398 (628)
246 PF08733 PalH: PalH/RIM21; In 20.4 5.9E+02 0.013 25.0 8.7 22 385-406 306-327 (348)
247 COG2271 UhpC Sugar phosphate p 20.2 2E+02 0.0044 29.1 5.3 68 319-404 85-152 (448)
248 PF11137 DUF2909: Protein of u 20.2 3.4E+02 0.0073 19.4 7.2 13 345-357 12-24 (63)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-34 Score=241.03 Aligned_cols=181 Identities=31% Similarity=0.451 Sum_probs=163.9
Q ss_pred HHHHHHHHhch-hhhcCCCCCCChHHHHHHHcCCHHHHHHHhh-cCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC
Q 013331 5 DIVKELLEARQ-EFAWKKDLNGHTPLHLSCSKGHLEITRELLK-LDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 82 (445)
Q Consensus 5 d~v~~Ll~~~~-~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~-~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~ 82 (445)
.-++++++..| .++...|.+|+||||+||+.|+.++|..|++ -+..++. +|..||||||+||..|+.++|+.|+.+.
T Consensus 17 ~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~dd-kDdaGWtPlhia~s~g~~evVk~Ll~r~ 95 (226)
T KOG4412|consen 17 FKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDD-KDDAGWTPLHIAASNGNDEVVKELLNRS 95 (226)
T ss_pred HHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCC-ccccCCchhhhhhhcCcHHHHHHHhcCC
Confidence 45788888888 5666666799999999999999999999995 4555555 7999999999999999999999999996
Q ss_pred CCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCC
Q 013331 83 LQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKG 162 (445)
Q Consensus 83 ~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G 162 (445)
..+.+..+..|.||||+|+..|+.+++++|+++ ++.++.+|..|.||||-|+..|..+++++|+..|+.+|..|+.|
T Consensus 96 ~advna~tn~G~T~LHyAagK~r~eIaqlLle~---ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G 172 (226)
T KOG4412|consen 96 GADVNATTNGGQTCLHYAAGKGRLEIAQLLLEK---GALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYG 172 (226)
T ss_pred CCCcceecCCCcceehhhhcCChhhHHHHHHhc---CCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccC
Confidence 678899999999999999999999999999998 78899999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013331 163 YTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 163 ~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
+||||.+ ...++.+....|+++|++..
T Consensus 173 ~TpL~~a----l~e~~~d~a~lLV~~gAd~~ 199 (226)
T KOG4412|consen 173 FTPLHHA----LAEGHPDVAVLLVRAGADTD 199 (226)
T ss_pred ccHHHHH----HhccCchHHHHHHHhcccee
Confidence 9999994 45557889999999998754
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-32 Score=229.41 Aligned_cols=163 Identities=31% Similarity=0.445 Sum_probs=151.2
Q ss_pred CCHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhc-CCCCCCCCCCCCccHHHHHHHcCCHHHHHHHH
Q 013331 1 MHVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKL-DPDLSSLPDNEGRTPLHWAAIKGRINIIDEIL 79 (445)
Q Consensus 1 ~~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~-~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll 79 (445)
|+++++++.|+..-.-..+.+|+.||||||+||..|+.|+|+.|+.+ |++++. .++.|.||||+||..|+.+|+.+|+
T Consensus 48 ~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna-~tn~G~T~LHyAagK~r~eIaqlLl 126 (226)
T KOG4412|consen 48 FGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNA-TTNGGQTCLHYAAGKGRLEIAQLLL 126 (226)
T ss_pred cCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcce-ecCCCcceehhhhcCChhhHHHHHH
Confidence 58899999999733233357799999999999999999999999999 999977 8999999999999999999999999
Q ss_pred hcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccc
Q 013331 80 SLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAIN 159 (445)
Q Consensus 80 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n 159 (445)
+++ ..+..+|..|.||||.|+.-|+.+++++|+.. ++.+|.+|..|+||||.|...++.+....|++.|++++..|
T Consensus 127 e~g-a~i~~kD~~~qtplHRAAavGklkvie~Li~~---~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~ed 202 (226)
T KOG4412|consen 127 EKG-ALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQ---GAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDRED 202 (226)
T ss_pred hcC-CCCcccccccCchhHHHHhccchhhHHHHHhc---CCCCCcccccCccHHHHHHhccCchHHHHHHHhccceeecc
Confidence 999 89999999999999999999999999999987 68899999999999999988999999999999999999999
Q ss_pred cCCCCHHHHH
Q 013331 160 RKGYTALDVV 169 (445)
Q Consensus 160 ~~G~Tpl~~a 169 (445)
++| ||+.++
T Consensus 203 ke~-t~~~~a 211 (226)
T KOG4412|consen 203 KEG-TALRIA 211 (226)
T ss_pred ccC-chHHHH
Confidence 999 998874
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=99.96 E-value=5.3e-28 Score=228.96 Aligned_cols=179 Identities=21% Similarity=0.225 Sum_probs=143.4
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++.+.+.+. .+|+||||+|+..|+.++++.|++.|++++. +|..|+||||+|+..|+.++++.|+++
T Consensus 41 g~~eiv~~Ll~~ga~~n~---~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~-~d~~G~TpLh~Aa~~g~~eivk~Ll~~ 116 (284)
T PHA02791 41 NNVRLVCTLLNAGALKNL---LENEFPLHQAATLEDTKIVKILLFSGMDDSQ-FDDKGNTALYYAVDSGNMQTVKLFVKK 116 (284)
T ss_pred CCHHHHHHHHHCcCCCcC---CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 567788888888766542 2467888888888888888888888888766 788888888888888888888888888
Q ss_pred CCCccccccccC-cchHhHHHHcCCHHHHHHHHHhcCcccccCCCC-CCCCcHHHHHHhCCcHHHHHHHHhcCCCccccc
Q 013331 82 NLQSAEMRTIHG-ETVLHLTVKNNQYEAVKYLMETLNITKLANMPD-NDGNTILHLATAGKLTTMVIYLLKLGVDVNAIN 159 (445)
Q Consensus 82 ~~~~~~~~~~~g-~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d-~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n 159 (445)
++ ..+.++..| .||||+|+..|+.+++++|+++.. +..| ..|.||||+|+..|+.+++++|+++|++++..|
T Consensus 117 ga-din~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~-----~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d 190 (284)
T PHA02791 117 NW-RLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP-----STFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNN 190 (284)
T ss_pred CC-CcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCC-----cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCccc
Confidence 74 445566666 488888888888888888887621 1123 358899999999999999999999999999999
Q ss_pred cCCCCH-HHHHhhhccccchhcHHHHHHHhcCcccC
Q 013331 160 RKGYTA-LDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 160 ~~G~Tp-l~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
..|.|| ||+ |...++.+++++|+++|++...
T Consensus 191 ~~g~t~~L~~----Aa~~~~~e~v~lLl~~Ga~in~ 222 (284)
T PHA02791 191 SLLFIPDIKL----AIDNKDLEMLQALFKYDINIYS 222 (284)
T ss_pred CCCCChHHHH----HHHcCCHHHHHHHHHCCCCCcc
Confidence 999987 898 6667788899999999988643
No 4
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.95 E-value=1.9e-27 Score=240.04 Aligned_cols=183 Identities=22% Similarity=0.233 Sum_probs=167.5
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.|+++.|++.+.+++ ..+.+|.||||+|+..|+.++++.|+++|++++. .+.+|.||||.|+..|+.++++.|++.
T Consensus 13 g~~~iv~~Ll~~g~~~n-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~ 90 (413)
T PHA02875 13 GELDIARRLLDIGINPN-FEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDV-KYPDIESELHDAVEEGDVKAVEELLDL 90 (413)
T ss_pred CCHHHHHHHHHCCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-cCCCcccHHHHHHHCCCHHHHHHHHHc
Confidence 67899999999998876 6677899999999999999999999999998765 678899999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013331 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
++......+.+|.||||+|+..|+.+++++|++. +++++.+|.+|.||||+|+..++.+++++|++.|++++..|..
T Consensus 91 ~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~---gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~ 167 (413)
T PHA02875 91 GKFADDVFYKDGMTPLHLATILKKLDIMKLLIAR---GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCC 167 (413)
T ss_pred CCcccccccCCCCCHHHHHHHhCCHHHHHHHHhC---CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Confidence 8766666777899999999999999999999998 7788999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013331 162 GYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
|.||||+ |...++.+++++|++.|++..
T Consensus 168 g~TpL~~----A~~~g~~eiv~~Ll~~ga~~n 195 (413)
T PHA02875 168 GCTPLII----AMAKGDIAICKMLLDSGANID 195 (413)
T ss_pred CCCHHHH----HHHcCCHHHHHHHHhCCCCCC
Confidence 9999999 555678889999999998764
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.95 E-value=2.9e-27 Score=223.94 Aligned_cols=173 Identities=20% Similarity=0.213 Sum_probs=152.9
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCc-cHHHHHHHcCCHHHHHHHHh
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGR-TPLHWAAIKGRINIIDEILS 80 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~-TpLh~Aa~~G~~~iv~~Ll~ 80 (445)
|+.|+++.|++.+.+++ ..|..|+||||+|+..|+.++++.|+++|++++. ++..|+ ||||+|+..|+.+++++|++
T Consensus 72 g~~eiV~lLL~~Gadvn-~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~-~~~~g~~TpL~~Aa~~g~~eivk~LL~ 149 (284)
T PHA02791 72 EDTKIVKILLFSGMDDS-QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF-YGKTGWKTSFYHAVMLNDVSIVSYFLS 149 (284)
T ss_pred CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc-cCCCCCcHHHHHHHHcCCHHHHHHHHh
Confidence 67899999999988776 7889999999999999999999999999999976 777774 89999999999999999999
Q ss_pred cCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcH-HHHHHhCCcHHHHHHHHhcCCCccccc
Q 013331 81 LNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTI-LHLATAGKLTTMVIYLLKLGVDVNAIN 159 (445)
Q Consensus 81 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~-LHlA~~~~~~~iv~~Ll~~g~~~~~~n 159 (445)
.++...+. ..|.||||+|+.+|+.+++++|+++ ++.+|.+|..|.|| ||+|+..++.+++++|+++|++++.+|
T Consensus 150 ~~~~~~d~--~~g~TpLh~Aa~~g~~eiv~lLL~~---gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~ 224 (284)
T PHA02791 150 EIPSTFDL--AILLSCIHITIKNGHVDMMILLLDY---MTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVN 224 (284)
T ss_pred cCCccccc--ccCccHHHHHHHcCCHHHHHHHHHC---CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCc
Confidence 87543221 2589999999999999999999998 77889999999987 999999999999999999999999999
Q ss_pred cCCCCHHHHHhhhccccchhcHHHHHHHhcCcc
Q 013331 160 RKGYTALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 160 ~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
.+| +++ ++.|++++|++..++.
T Consensus 225 ~~~-~~l----------~~~e~~~~ll~~~~~~ 246 (284)
T PHA02791 225 LEN-VLL----------DDAEIAKMIIEKHVEY 246 (284)
T ss_pred ccC-ccC----------CCHHHHHHHHHhhhhh
Confidence 955 665 4456999999877653
No 6
>PF13962 PGG: Domain of unknown function
Probab=99.95 E-value=8e-28 Score=196.54 Aligned_cols=109 Identities=33% Similarity=0.652 Sum_probs=95.5
Q ss_pred HHHHHhccchhHHHHHHHHHHhhcccccCCCCcccC---CCcccccCCc-ccchhHhHHHHHHHHHHHHHHHHHhccccc
Q 013331 248 TEGLRNARKTIIIVAVLIATVTFAAGINPPGGFNQV---SGKSLVGKQT-SFKVFMVCNIVALFLSLGIVIFLVSIIPFQ 323 (445)
Q Consensus 248 ~e~lk~t~~s~lvVA~LIATvtFaA~~t~PGG~~~~---~G~~~~~~~~-~F~~F~~~n~~a~~~S~~~~~~~~~~~~~~ 323 (445)
+||+++++++++|||+|||||||||++|||||+||| .|+|++.+++ .|++|+++|++||++|+++++++++.+...
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~~~~ 80 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGLDDF 80 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 478899999999999999999999999999999886 6999998777 999999999999999999999888544222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013331 324 RKSMMQLLVVTHRVMWLSVSFLAAAYIAAIWTI 356 (445)
Q Consensus 324 ~~~~~~~l~~~~~~l~~si~~m~~af~~~~~~v 356 (445)
.+..++.+.++..+||+++.+|++||++|+|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 81 RRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 345556777888899999999999999999875
No 7
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.94 E-value=1.8e-26 Score=233.03 Aligned_cols=183 Identities=22% Similarity=0.289 Sum_probs=167.2
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
+..|+++.|++.+.... ..+.+|.||||+|+..|+.++++.|++.|++.....+.+|.||||+|+..|+.++++.|++.
T Consensus 46 ~~~~~v~~Ll~~ga~~~-~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~ 124 (413)
T PHA02875 46 RDSEAIKLLMKHGAIPD-VKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIAR 124 (413)
T ss_pred CCHHHHHHHHhCCCCcc-ccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhC
Confidence 67899999999987755 56778999999999999999999999999988776788999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013331 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
| ..++.++..|.||||+|+..|+.+++++|+++ +..++.+|..|+||||+|+..|+.+++++|++.|++++..+..
T Consensus 125 g-ad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~ 200 (413)
T PHA02875 125 G-ADPDIPNTDKFSPLHLAVMMGDIKGIELLIDH---KACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKN 200 (413)
T ss_pred C-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc---CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCC
Confidence 8 56778889999999999999999999999998 6778999999999999999999999999999999999999988
Q ss_pred CC-CHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013331 162 GY-TALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 162 G~-Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
|. ||+++ |...++.+++++|++.|++..
T Consensus 201 ~~~t~l~~----A~~~~~~~iv~~Ll~~gad~n 229 (413)
T PHA02875 201 GCVAALCY----AIENNKIDIVRLFIKRGADCN 229 (413)
T ss_pred CCchHHHH----HHHcCCHHHHHHHHHCCcCcc
Confidence 75 78888 555677899999999998864
No 8
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.94 E-value=3.1e-26 Score=232.61 Aligned_cols=183 Identities=20% Similarity=0.282 Sum_probs=166.8
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..|+++.|++.++...+..+.+|.||||.|+..|+.++|++|++.|++++. .+..|.||||.|+..|+.+++++|++.
T Consensus 12 gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~-~~~~~~t~L~~A~~~~~~~iv~~Ll~~ 90 (434)
T PHA02874 12 GDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINH-INTKIPHPLLTAIKIGAHDIIKLLIDN 90 (434)
T ss_pred CCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 5679999999988876667888999999999999999999999999999976 788999999999999999999999987
Q ss_pred CCC----------------------ccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhC
Q 013331 82 NLQ----------------------SAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAG 139 (445)
Q Consensus 82 ~~~----------------------~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~ 139 (445)
+.. ..+.++..|.||||+|+..|+.+++++|++. +..+|.+|.+|+||||+|+..
T Consensus 91 g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~---gad~n~~d~~g~tpLh~A~~~ 167 (434)
T PHA02874 91 GVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEY---GADVNIEDDNGCYPIHIAIKH 167 (434)
T ss_pred CCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhC---CCCCCCcCCCCCCHHHHHHHC
Confidence 743 2345678899999999999999999999997 778899999999999999999
Q ss_pred CcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcc
Q 013331 140 KLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 140 ~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
++.+++++|++.|++++..|..|.||||+ +...++.+++++|++.|++.
T Consensus 168 ~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~----A~~~g~~~iv~~Ll~~g~~i 216 (434)
T PHA02874 168 NFFDIIKLLLEKGAYANVKDNNGESPLHN----AAEYGDYACIKLLIDHGNHI 216 (434)
T ss_pred CcHHHHHHHHHCCCCCCCCCCCCCCHHHH----HHHcCCHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999 55567889999999998764
No 9
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.94 E-value=8.9e-27 Score=230.27 Aligned_cols=182 Identities=31% Similarity=0.438 Sum_probs=163.5
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|-.+-|+.+++.....++..|.+|.|+||+||.+++++++++|+++|++++.+-..-|.||||+||++|+..+++.|+++
T Consensus 55 G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqh 134 (600)
T KOG0509|consen 55 GELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQH 134 (600)
T ss_pred chHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHc
Confidence 45678999999944444588999999999999999999999999999999986557889999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccc-c
Q 013331 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAIN-R 160 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n-~ 160 (445)
| ++++.+|.+|.||||+|+..|+.-.+-||+.+ +.++|.+|.+|.||||+|+.++....+..|++-|+.++..| +
T Consensus 135 G-Adpt~~D~~G~~~lHla~~~~~~~~vayll~~---~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~ 210 (600)
T KOG0509|consen 135 G-ADPTLKDKQGLTPLHLAAQFGHTALVAYLLSK---GADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDN 210 (600)
T ss_pred C-CCCceecCCCCcHHHHHHHhCchHHHHHHHHh---cccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccc
Confidence 9 78899999999999999999999999999998 58899999999999999999999888999999999999998 8
Q ss_pred CCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013331 161 KGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 161 ~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
+|.||||. +...++...+.++++.|++
T Consensus 211 ~g~TpLHw----a~~~gN~~~v~Ll~~g~~~ 237 (600)
T KOG0509|consen 211 HGNTPLHW----AVVGGNLTAVKLLLEGGAD 237 (600)
T ss_pred cCCchHHH----HHhcCCcceEehhhhcCCc
Confidence 99999999 5566777777755555554
No 10
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.94 E-value=5e-26 Score=233.77 Aligned_cols=180 Identities=30% Similarity=0.375 Sum_probs=140.0
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHH------------------------------------------
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLE------------------------------------------ 39 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~------------------------------------------ 39 (445)
|+.|+|+.|++.+.+++ ..|..|+||||+||..|+.+
T Consensus 48 g~~e~vk~Ll~~gadvn-~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~ 126 (477)
T PHA02878 48 RNLDVVKSLLTRGHNVN-QPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYK 126 (477)
T ss_pred CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHHHHHhCccc
Confidence 56788888888887766 67888888888888766543
Q ss_pred ----------------------HHHHHhhcCCCCCCCCCCC-CccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcch
Q 013331 40 ----------------------ITRELLKLDPDLSSLPDNE-GRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETV 96 (445)
Q Consensus 40 ----------------------iv~~LL~~~~~~~~~~d~~-G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~ 96 (445)
+++.|+++|++++. +|.+ |.||||+|+..|+.++++.|++.+ ..++.+|..|.||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~-~~~~~g~tpLh~A~~~~~~~iv~~Ll~~g-ad~n~~d~~g~tp 204 (477)
T PHA02878 127 NIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINM-KDRHKGNTALHYATENKDQRLTELLLSYG-ANVNIPDKTNNSP 204 (477)
T ss_pred CcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCc-cCCCCCCCHHHHHHhCCCHHHHHHHHHCC-CCCCCcCCCCCCH
Confidence 45555556666655 5666 888888888888888888888887 4567778888888
Q ss_pred HhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhC-CcHHHHHHHHhcCCCcccccc-CCCCHHHHHhhhcc
Q 013331 97 LHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAG-KLTTMVIYLLKLGVDVNAINR-KGYTALDVVESDAS 174 (445)
Q Consensus 97 Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~-~~~~iv~~Ll~~g~~~~~~n~-~G~Tpl~~a~~~a~ 174 (445)
||.|+..|+.+++++|++. +..+|.+|..|.||||+|+.. ++.+++++|+++|++++..+. .|.||||+|
T Consensus 205 Lh~A~~~~~~~iv~~Ll~~---ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A----- 276 (477)
T PHA02878 205 LHHAVKHYNKPIVHILLEN---GASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS----- 276 (477)
T ss_pred HHHHHHhCCHHHHHHHHHc---CCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH-----
Confidence 8888888888888888876 677888888888888888864 578888888888888888775 788888885
Q ss_pred ccchhcHHHHHHHhcCccc
Q 013331 175 NSGALQIVPALEEAGARRC 193 (445)
Q Consensus 175 ~~~~~~i~~~L~~~ga~~~ 193 (445)
.++.+++++|++.|++..
T Consensus 277 -~~~~~~v~~Ll~~gadin 294 (477)
T PHA02878 277 -IKSERKLKLLLEYGADIN 294 (477)
T ss_pred -ccCHHHHHHHHHCCCCCC
Confidence 234567888888887654
No 11
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=8.2e-25 Score=220.32 Aligned_cols=184 Identities=28% Similarity=0.364 Sum_probs=154.1
Q ss_pred CHHHHHHHHHHhc-----hhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCC--------------CCCCCCCccH
Q 013331 2 HVADIVKELLEAR-----QEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLS--------------SLPDNEGRTP 62 (445)
Q Consensus 2 ~~~d~v~~Ll~~~-----~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~--------------~~~d~~G~Tp 62 (445)
|..|+.+.++.++ ..+ +..|..|.||||.|+..|++++++.+|+.+.... ...|++|.||
T Consensus 198 ~s~e~mEi~l~~~g~~r~~~i-n~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tp 276 (929)
T KOG0510|consen 198 GSKECMEIFLPEHGYERQTHI-NFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTP 276 (929)
T ss_pred cchhhhhhhhccccchhhccc-ccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCch
Confidence 3456667777622 222 3567788899999999999999999998765432 2258899999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcH
Q 013331 63 LHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLT 142 (445)
Q Consensus 63 Lh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~ 142 (445)
||+||+.|+.++++.|+..| .+++.++.+++||||.||.+|+.+.|+.|++ -....+.|..|..|.||||+|+..|+.
T Consensus 277 LH~a~r~G~~~svd~Ll~~G-a~I~~kn~d~~spLH~AA~yg~~ntv~rLL~-~~~~rllne~D~~g~tpLHlaa~~gH~ 354 (929)
T KOG0510|consen 277 LHYAARQGGPESVDNLLGFG-ASINSKNKDEESPLHFAAIYGRINTVERLLQ-ESDTRLLNESDLHGMTPLHLAAKSGHD 354 (929)
T ss_pred HHHHHHcCChhHHHHHHHcC-CcccccCCCCCCchHHHHHcccHHHHHHHHh-CcCccccccccccCCCchhhhhhcCHH
Confidence 99999999999999999998 7888999999999999999999999999998 334568899999999999999999999
Q ss_pred HHHHHHHhcCCCcc---ccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcc
Q 013331 143 TMVIYLLKLGVDVN---AINRKGYTALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 143 ~iv~~Ll~~g~~~~---~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
.+++.|++.|+... ..|.+|.||||. |...++..+++.|+.+|++.
T Consensus 355 ~v~qlLl~~GA~~~~~~e~D~dg~TaLH~----Aa~~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 355 RVVQLLLNKGALFLNMSEADSDGNTALHL----AAKYGNTSAVQKLISHGADI 403 (929)
T ss_pred HHHHHHHhcChhhhcccccccCCchhhhH----HHHhccHHHHHHHHHcCCce
Confidence 99999999999877 458999999999 67778888999999999976
No 12
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.94 E-value=5.4e-26 Score=237.73 Aligned_cols=186 Identities=22% Similarity=0.261 Sum_probs=110.7
Q ss_pred HHHHHHHHHHhc-hhhhcCCCCCCChHHHHHHH--cCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCC--HHHHHH
Q 013331 3 VADIVKELLEAR-QEFAWKKDLNGHTPLHLSCS--KGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGR--INIIDE 77 (445)
Q Consensus 3 ~~d~v~~Ll~~~-~~~~~~~d~~G~TpLH~Aa~--~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~--~~iv~~ 77 (445)
..|+++.|++.+ .+++...|..|.||||+|+. .++.+++++|+++|++++. +|.+|.||||+|+..|+ .++++.
T Consensus 154 ~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~-kD~~G~TPLH~Aa~~g~~~~eIVkl 232 (764)
T PHA02716 154 DLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNL-QNNHLITPLHTYLITGNVCASVIKK 232 (764)
T ss_pred CHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCCCHHHHHH
Confidence 346666666666 55543335666666666543 2456666666666666655 56666666666666664 366666
Q ss_pred HHhcCCCccccccccCcchHhHH-------------------------------------HHcCCHHHHHHHHHhcCccc
Q 013331 78 ILSLNLQSAEMRTIHGETVLHLT-------------------------------------VKNNQYEAVKYLMETLNITK 120 (445)
Q Consensus 78 Ll~~~~~~~~~~~~~g~t~Lh~A-------------------------------------~~~g~~~~v~~Ll~~~~~~~ 120 (445)
|+++| ..++.+|..|+||||.| +++|+.+++++|++. +.
T Consensus 233 LLe~G-ADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~---GA 308 (764)
T PHA02716 233 IIELG-GDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQP---GV 308 (764)
T ss_pred HHHcC-CCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhC---CC
Confidence 66666 44556666666666643 334566666666665 55
Q ss_pred ccCCCCCCCCcHHHHHHh--CCcHHHHHHHHhcCCCccccccCCCCHHHHHhhh----------ccccchhcHHHHHHHh
Q 013331 121 LANMPDNDGNTILHLATA--GKLTTMVIYLLKLGVDVNAINRKGYTALDVVESD----------ASNSGALQIVPALEEA 188 (445)
Q Consensus 121 ~~n~~d~~g~T~LHlA~~--~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~----------a~~~~~~~i~~~L~~~ 188 (445)
.+|.+|.+|+||||+|+. .++.+++++|++.|++++.+|..|+||||++... ....++.+++++|++.
T Consensus 309 dIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~ 388 (764)
T PHA02716 309 KLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISL 388 (764)
T ss_pred ceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHC
Confidence 566666666666666543 3456666666666666666666666666654321 0112455666666666
Q ss_pred cCccc
Q 013331 189 GARRC 193 (445)
Q Consensus 189 ga~~~ 193 (445)
|++..
T Consensus 389 GADIn 393 (764)
T PHA02716 389 GADIT 393 (764)
T ss_pred CCCCC
Confidence 66543
No 13
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.94 E-value=6e-26 Score=233.68 Aligned_cols=183 Identities=27% Similarity=0.352 Sum_probs=107.0
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHH--HcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcC--CHHHHHH
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSC--SKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG--RINIIDE 77 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa--~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G--~~~iv~~ 77 (445)
++.|+++.|++.++++ +..|..|.||||+|+ ..|+.++++.|+++|++++. .|..|.||||+|+..| +.++++.
T Consensus 84 ~~~~iv~~Ll~~ga~i-~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~iv~~ 161 (480)
T PHA03100 84 DVKEIVKLLLEYGANV-NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNI-KNSDGENLLHLYLESNKIDLKILKL 161 (480)
T ss_pred chHHHHHHHHHCCCCC-CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCc-cCCCCCcHHHHHHHcCCChHHHHHH
Confidence 3456666666666555 355566666666666 66666666666666666544 5556666666666666 5666666
Q ss_pred HHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcC--------------------------------------cc
Q 013331 78 ILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLN--------------------------------------IT 119 (445)
Q Consensus 78 Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~--------------------------------------~~ 119 (445)
|++++ ..++.++..|.||||+|+..|+.+++++|+++.. .+
T Consensus 162 Ll~~g-~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g 240 (480)
T PHA03100 162 LIDKG-VDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYG 240 (480)
T ss_pred HHHCC-CCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcC
Confidence 66655 2344455556666666666666666665555410 03
Q ss_pred cccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013331 120 KLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 120 ~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
..+|.+|..|.||||.|+..++.+++++|++.|++++.+|..|.||+++ +...++.++++.|++.|++
T Consensus 241 ~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~----A~~~~~~~iv~~Ll~~g~~ 308 (480)
T PHA03100 241 VPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHI----AILNNNKEIFKLLLNNGPS 308 (480)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHH----HHHhCCHHHHHHHHhcCCC
Confidence 4455556666666666666666666666666666666666666666666 3334455566666666553
No 14
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94 E-value=1.5e-25 Score=204.41 Aligned_cols=161 Identities=20% Similarity=0.251 Sum_probs=123.9
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcC--CHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHc---CCHHHHH
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKG--HLEITRELLKLDPDLSSLPDNEGRTPLHWAAIK---GRINIID 76 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g--~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~---G~~~iv~ 76 (445)
+..++|+.|++. .+..|..|.||||+|+..+ +.++++.|+++|++++...+..|+||||+|+.. ++.++++
T Consensus 32 ~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~ 107 (209)
T PHA02859 32 DDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILK 107 (209)
T ss_pred CcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHH
Confidence 456778888754 2356778888888888754 788888888888888763235788888887753 4678888
Q ss_pred HHHhcCCCccccccccCcchHhHHHH--cCCHHHHHHHHHhcCcccccCCCCCCCCcHHHH-HHhCCcHHHHHHHHhcCC
Q 013331 77 EILSLNLQSAEMRTIHGETVLHLTVK--NNQYEAVKYLMETLNITKLANMPDNDGNTILHL-ATAGKLTTMVIYLLKLGV 153 (445)
Q Consensus 77 ~Ll~~~~~~~~~~~~~g~t~Lh~A~~--~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHl-A~~~~~~~iv~~Ll~~g~ 153 (445)
.|++++ ..++.+|.+|.||||.|+. .++.+++++|++. +..++.+|.+|+||||. |+..++.+++++|++.|+
T Consensus 108 ~Ll~~g-adin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~---gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Ga 183 (209)
T PHA02859 108 ILIDSG-SSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDS---GVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGI 183 (209)
T ss_pred HHHHCC-CCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHc---CCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCC
Confidence 888877 5677788888888888776 3578888888877 67778888888888885 456678888888888888
Q ss_pred CccccccCCCCHHHHHh
Q 013331 154 DVNAINRKGYTALDVVE 170 (445)
Q Consensus 154 ~~~~~n~~G~Tpl~~a~ 170 (445)
+++.+|..|.||+|+|.
T Consensus 184 di~~~d~~g~tpl~la~ 200 (209)
T PHA02859 184 DINETNKSGYNCYDLIK 200 (209)
T ss_pred CCCCCCCCCCCHHHHHh
Confidence 88888888888888853
No 15
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.94 E-value=1.9e-26 Score=227.96 Aligned_cols=166 Identities=29% Similarity=0.392 Sum_probs=152.9
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.|++++|++++.+++..-..-|.||||+|+++|++.+|..|+++|+|+.. +|.+|.||||+||..|++-++-+++.+
T Consensus 89 Nrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~-~D~~G~~~lHla~~~~~~~~vayll~~ 167 (600)
T KOG0509|consen 89 NRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTL-KDKQGLTPLHLAAQFGHTALVAYLLSK 167 (600)
T ss_pred CcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCce-ecCCCCcHHHHHHHhCchHHHHHHHHh
Confidence 6789999999999999855557799999999999999999999999999976 999999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCC-CCCCcHHHHHHhCCcHHHHHHHHhcCCCcccccc
Q 013331 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPD-NDGNTILHLATAGKLTTMVIYLLKLGVDVNAINR 160 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d-~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~ 160 (445)
+ .+.+.+|.+|+||||+|+..|....+..|+.. ++.++..| ++|+||||+|+..|+..++.+|++.|++.+..|.
T Consensus 168 ~-~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f---~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~ 243 (600)
T KOG0509|consen 168 G-ADIDLRDNNGRTPLMWAAYKGFALFVRRLLKF---GASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNT 243 (600)
T ss_pred c-ccCCCcCCCCCCHHHHHHHhcccHHHHHHHHh---cccccccccccCCchHHHHHhcCCcceEehhhhcCCccccccc
Confidence 9 88999999999999999999998888888876 66677776 9999999999999999999966699999999999
Q ss_pred CCCCHHHHHhhh
Q 013331 161 KGYTALDVVESD 172 (445)
Q Consensus 161 ~G~Tpl~~a~~~ 172 (445)
+|.||+++|.+.
T Consensus 244 ~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 244 NGKTPFDLAQER 255 (600)
T ss_pred CCCCHHHHHHHh
Confidence 999999997544
No 16
>PHA02946 ankyin-like protein; Provisional
Probab=99.93 E-value=1.5e-25 Score=226.85 Aligned_cols=179 Identities=21% Similarity=0.269 Sum_probs=150.6
Q ss_pred HHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCC--HHHHHHHHhc
Q 013331 4 ADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGR--INIIDEILSL 81 (445)
Q Consensus 4 ~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~--~~iv~~Ll~~ 81 (445)
.++++.|++.+.+++ ..|.+|.||||+||..|+.++|+.|+++|++++. +|.+|+||||+|+..++ .++++.|+++
T Consensus 52 ~~iv~~Ll~~Gadvn-~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~-~d~~g~TpLh~A~~~~~~~~e~v~lLl~~ 129 (446)
T PHA02946 52 ERFVEELLHRGYSPN-ETDDDGNYPLHIASKINNNRIVAMLLTHGADPNA-CDKQHKTPLYYLSGTDDEVIERINLLVQY 129 (446)
T ss_pred HHHHHHHHHCcCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCC-CCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence 579999999999876 7899999999999999999999999999999976 89999999999998764 7899999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCC--cHHHHHHHHhcCCCccccc
Q 013331 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGK--LTTMVIYLLKLGVDVNAIN 159 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~--~~~iv~~Ll~~g~~~~~~n 159 (445)
+.+.....|..|.|||| |+..|+.+++++|++. +..++.+|..|+||||+|+..+ +.+++++|++.|++++.+|
T Consensus 130 Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~---gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d 205 (446)
T PHA02946 130 GAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSI---GFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPD 205 (446)
T ss_pred CCCcccccCCCCCcHHH-HHHCCChHHHHHHHhc---cccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccC
Confidence 85544456888999997 6667889999999987 6778889999999999887654 4688899999999999999
Q ss_pred cCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013331 160 RKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 160 ~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
.+|.||||+|... ..++.+++++|++ |++
T Consensus 206 ~~G~TpLH~Aa~~--~~~~~~iv~lLl~-gad 234 (446)
T PHA02946 206 HDGNTPLHIVCSK--TVKNVDIINLLLP-STD 234 (446)
T ss_pred CCCCCHHHHHHHc--CCCcHHHHHHHHc-CCC
Confidence 9999999996432 1235567887774 544
No 17
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.93 E-value=2.2e-25 Score=233.13 Aligned_cols=149 Identities=25% Similarity=0.306 Sum_probs=117.6
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCC--HHHHHHHhhcCCCCCCCCCCCCccHHHHH--------------
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGH--LEITRELLKLDPDLSSLPDNEGRTPLHWA-------------- 66 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~--~~iv~~LL~~~~~~~~~~d~~G~TpLh~A-------------- 66 (445)
..|+++.|++.+.+++ ..|..|.||||+|+..|+ .++|+.|+++|++++. +|..|+||||.|
T Consensus 191 ~~eIVklLLe~GADVN-~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~-kD~~G~TPLh~Ai~~a~n~~~EIvki 268 (764)
T PHA02716 191 DIDILEWLCNNGVNVN-LQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDM-KCVNGMSPIMTYIINIDNINPEITNI 268 (764)
T ss_pred CHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHhhhccCHHHHHH
Confidence 3578888888887776 678888888888888885 4888888888888876 788888888864
Q ss_pred -----------------------HHcCCHHHHHHHHhcCCCccccccccCcchHhHHHH--cCCHHHHHHHHHhcCcccc
Q 013331 67 -----------------------AIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVK--NNQYEAVKYLMETLNITKL 121 (445)
Q Consensus 67 -----------------------a~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~--~g~~~~v~~Ll~~~~~~~~ 121 (445)
+..|+.++++.|++.+ ..++.+|.+|+||||+|+. +++.+++++|+++ +++
T Consensus 269 Lie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~G-AdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~---GAD 344 (764)
T PHA02716 269 YIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPG-VKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEY---GND 344 (764)
T ss_pred HHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCC-CceeccCCCCCCHHHHHHHHhCCCchHHHHHHHc---CCC
Confidence 3457778888888877 4567778888888888764 4577888888877 677
Q ss_pred cCCCCCCCCcHHHHHHh--------------CCcHHHHHHHHhcCCCccc
Q 013331 122 ANMPDNDGNTILHLATA--------------GKLTTMVIYLLKLGVDVNA 157 (445)
Q Consensus 122 ~n~~d~~g~T~LHlA~~--------------~~~~~iv~~Ll~~g~~~~~ 157 (445)
+|.+|..|+||||+|+. .++.+++++|++.|++++.
T Consensus 345 IN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~ 394 (764)
T PHA02716 345 LNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITA 394 (764)
T ss_pred CccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCC
Confidence 88888888888888764 2577888888888888753
No 18
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.93 E-value=4e-25 Score=224.48 Aligned_cols=164 Identities=24% Similarity=0.336 Sum_probs=135.8
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCC----------------------CCCCCCC
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLS----------------------SLPDNEG 59 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~----------------------~~~d~~G 59 (445)
|+.|+|+.|++.+++++ ..+..|.||||+|+..|+.+++++|+++|++.. ..+|..|
T Consensus 46 g~~~iv~~Ll~~Ga~~n-~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g 124 (434)
T PHA02874 46 GDAKIVELFIKHGADIN-HINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAEL 124 (434)
T ss_pred CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCC
Confidence 67889999999888776 677788999999999999988888888765431 2267788
Q ss_pred ccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhC
Q 013331 60 RTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAG 139 (445)
Q Consensus 60 ~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~ 139 (445)
.||||+|+..|+.++++.|++.+ ...+.+|..|.||||+|+.+|+.+++++|+++ +..++.+|..|+||||+|+..
T Consensus 125 ~T~Lh~A~~~~~~~~v~~Ll~~g-ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~---g~~~n~~~~~g~tpL~~A~~~ 200 (434)
T PHA02874 125 KTFLHYAIKKGDLESIKMLFEYG-ADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEK---GAYANVKDNNGESPLHNAAEY 200 (434)
T ss_pred ccHHHHHHHCCCHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHc
Confidence 99999999999999999999887 45677888899999999999999999999887 667788888899999999999
Q ss_pred CcHHHHHHHHhcCCCccccccCCCCHHHHHh
Q 013331 140 KLTTMVIYLLKLGVDVNAINRKGYTALDVVE 170 (445)
Q Consensus 140 ~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~ 170 (445)
++.+++++|++.|++++..+..|.||||.|.
T Consensus 201 g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~ 231 (434)
T PHA02874 201 GDYACIKLLIDHGNHIMNKCKNGFTPLHNAI 231 (434)
T ss_pred CCHHHHHHHHhCCCCCcCCCCCCCCHHHHHH
Confidence 9999999999888887777777777777654
No 19
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.93 E-value=2.4e-25 Score=228.72 Aligned_cols=175 Identities=28% Similarity=0.344 Sum_probs=154.6
Q ss_pred HHHHHHHHHhchhhhcCCCCC-CChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC
Q 013331 4 ADIVKELLEARQEFAWKKDLN-GHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 82 (445)
Q Consensus 4 ~d~v~~Ll~~~~~~~~~~d~~-G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~ 82 (445)
.|+++.|++.+.+++ ..|.. |.||||+|+..|+.++++.|++.|++++. +|..|.||||.|+..|+.++++.|++.+
T Consensus 147 ~~iv~~Ll~~gadin-~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~-~d~~g~tpLh~A~~~~~~~iv~~Ll~~g 224 (477)
T PHA02878 147 AEITKLLLSYGADIN-MKDRHKGNTALHYATENKDQRLTELLLSYGANVNI-PDKTNNSPLHHAVKHYNKPIVHILLENG 224 (477)
T ss_pred HHHHHHHHHcCCCCC-ccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 469999999999887 55666 99999999999999999999999999976 8999999999999999999999999998
Q ss_pred CCccccccccCcchHhHHHHc-CCHHHHHHHHHhcCcccccCCCCC-CCCcHHHHHHhCCcHHHHHHHHhcCCCcccccc
Q 013331 83 LQSAEMRTIHGETVLHLTVKN-NQYEAVKYLMETLNITKLANMPDN-DGNTILHLATAGKLTTMVIYLLKLGVDVNAINR 160 (445)
Q Consensus 83 ~~~~~~~~~~g~t~Lh~A~~~-g~~~~v~~Ll~~~~~~~~~n~~d~-~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~ 160 (445)
...+.+|..|+||||+|+.. ++.+++++|+++ +..+|.++. .|.||||+| .++.+++++|+++|++++..|.
T Consensus 225 -a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~---gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~ 298 (477)
T PHA02878 225 -ASTDARDKCGNTPLHISVGYCKDYDILKLLLEH---GVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNS 298 (477)
T ss_pred -CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHc---CCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCC
Confidence 57788999999999999976 789999999998 778888876 899999999 4678999999999999999999
Q ss_pred CCCCHHHHHhhhccccchhcHHHHHHHhc
Q 013331 161 KGYTALDVVESDASNSGALQIVPALEEAG 189 (445)
Q Consensus 161 ~G~Tpl~~a~~~a~~~~~~~i~~~L~~~g 189 (445)
.|.||+++|... ....++.+.|+..+
T Consensus 299 ~g~TpL~~A~~~---~~~~~~~~~li~~~ 324 (477)
T PHA02878 299 YKLTPLSSAVKQ---YLCINIGRILISNI 324 (477)
T ss_pred CCCCHHHHHHHH---cCccchHHHHHHHH
Confidence 999999997652 22345666666554
No 20
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.93 E-value=2e-25 Score=229.75 Aligned_cols=182 Identities=27% Similarity=0.394 Sum_probs=159.0
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHH-----HHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHH--HcCCHHH
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHL-----SCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAA--IKGRINI 74 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~-----Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa--~~G~~~i 74 (445)
++.++++.|++.+.+++ ..+..|.||||+ |+..|+.++++.|++.|++++. .|..|.||||+|+ ..|+.++
T Consensus 46 ~~~~ivk~Ll~~g~~~~-~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~-~d~~g~tpL~~A~~~~~~~~~i 123 (480)
T PHA03100 46 RNIDVVKILLDNGADIN-SSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNA-PDNNGITPLLYAISKKSNSYSI 123 (480)
T ss_pred CCHHHHHHHHHcCCCCC-CccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCC-CCCCCCchhhHHHhcccChHHH
Confidence 57899999999998876 778889999999 9999999999999999999955 8999999999999 9999999
Q ss_pred HHHHHhcCCCccccccccCcchHhHHHHcC--CHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcC
Q 013331 75 IDEILSLNLQSAEMRTIHGETVLHLTVKNN--QYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 152 (445)
Q Consensus 75 v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g 152 (445)
++.|++.+ ...+..+..|.||||.|+..| +.+++++|+++ +..++.+|..|.||||+|+..++.+++++|++.|
T Consensus 124 v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~---g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g 199 (480)
T PHA03100 124 VEYLLDNG-ANVNIKNSDGENLLHLYLESNKIDLKILKLLIDK---GVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNG 199 (480)
T ss_pred HHHHHHcC-CCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHC---CCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999998 567788999999999999999 99999999998 7778899999999999999999888888888888
Q ss_pred CCccccccCC------CCHHHHHhhhccccch--hcHHHHHHHhcCccc
Q 013331 153 VDVNAINRKG------YTALDVVESDASNSGA--LQIVPALEEAGARRC 193 (445)
Q Consensus 153 ~~~~~~n~~G------~Tpl~~a~~~a~~~~~--~~i~~~L~~~ga~~~ 193 (445)
++++..+..| .||++.+ ...++ .+++++|++.|++..
T Consensus 200 a~~~~~~~~~~~~~~~~t~l~~a----~~~~~~~~~iv~~Ll~~g~din 244 (480)
T PHA03100 200 ADINAGDIETLLFTIFETPLHIA----ACYNEITLEVVNYLLSYGVPIN 244 (480)
T ss_pred CCccCCCCCCCcHHHHHhHHHHH----HHhCcCcHHHHHHHHHcCCCCC
Confidence 8888777777 6777773 33344 667777777766543
No 21
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.93 E-value=5.7e-25 Score=226.75 Aligned_cols=183 Identities=22% Similarity=0.313 Sum_probs=154.8
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHc---CCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHc--CCHHHHHH
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSK---GHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIK--GRINIIDE 77 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~---g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~--G~~~iv~~ 77 (445)
+.|+++.|++.+.+++ ..|..|.||||.|+.. |+.++++.|+++|++++..+|..|+||||+|+.. ++.++++.
T Consensus 87 ~~~iv~~Ll~~Gadin-~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~ 165 (494)
T PHA02989 87 IKKIVKLLLKFGADIN-LKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKI 165 (494)
T ss_pred HHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHH
Confidence 5689999999999876 7788999999988765 6799999999999999545899999999998764 68899999
Q ss_pred HHhcCCCccccccccCcchHhHHHHcC----CHHHHHHHHHhcCc-----------------------------------
Q 013331 78 ILSLNLQSAEMRTIHGETVLHLTVKNN----QYEAVKYLMETLNI----------------------------------- 118 (445)
Q Consensus 78 Ll~~~~~~~~~~~~~g~t~Lh~A~~~g----~~~~v~~Ll~~~~~----------------------------------- 118 (445)
|+++|.+.....+..|.||||+|+.++ +.+++++|+++...
T Consensus 166 Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~ 245 (494)
T PHA02989 166 LLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK 245 (494)
T ss_pred HHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh
Confidence 999995443336778999999998764 88999999986311
Q ss_pred ccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcC
Q 013331 119 TKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGA 190 (445)
Q Consensus 119 ~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga 190 (445)
+..+|.+|.+|+||||+|+..++.+++++|++.|++++.+|..|.|||++ |...++.++++.|++.++
T Consensus 246 ~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~----A~~~~~~~iv~~LL~~~p 313 (494)
T PHA02989 246 YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTY----AIKHGNIDMLNRILQLKP 313 (494)
T ss_pred CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHH----HHHcCCHHHHHHHHhcCC
Confidence 12357788899999999999999999999999999999999999999999 455577889999988664
No 22
>PHA02798 ankyrin-like protein; Provisional
Probab=99.93 E-value=6.1e-25 Score=226.27 Aligned_cols=183 Identities=26% Similarity=0.270 Sum_probs=134.8
Q ss_pred HHHHHHHHHhchhhhcCCCCCCChHHHHHHHcC---CHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCC---HHHHHH
Q 013331 4 ADIVKELLEARQEFAWKKDLNGHTPLHLSCSKG---HLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGR---INIIDE 77 (445)
Q Consensus 4 ~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g---~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~---~~iv~~ 77 (445)
.|+++.|++.+.+++ ..|.+|+||||+|+..| +.++++.|+++|++++. +|.+|.||||+|+..|+ .++++.
T Consensus 89 ~~iv~~Ll~~GadiN-~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~tpL~~a~~~~~~~~~~vv~~ 166 (489)
T PHA02798 89 LDIVKILIENGADIN-KKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTL-LDKDGFTMLQVYLQSNHHIDIEIIKL 166 (489)
T ss_pred HHHHHHHHHCCCCCC-CCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccc-cCCCCCcHHHHHHHcCCcchHHHHHH
Confidence 577777777777755 56667777777777764 56777777777777755 67777777777777776 777777
Q ss_pred HHhcCCCccccc-cccCcchHhHHHHc----CCHHHHHHHHHhcCc----------------------------------
Q 013331 78 ILSLNLQSAEMR-TIHGETVLHLTVKN----NQYEAVKYLMETLNI---------------------------------- 118 (445)
Q Consensus 78 Ll~~~~~~~~~~-~~~g~t~Lh~A~~~----g~~~~v~~Ll~~~~~---------------------------------- 118 (445)
|++.|. +++.. +..|.||||.++.+ ++.+++++|+++...
T Consensus 167 Ll~~ga-din~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l 245 (489)
T PHA02798 167 LLEKGV-DINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFI 245 (489)
T ss_pred HHHhCC-CcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHH
Confidence 777763 33333 34567777776653 356777777654210
Q ss_pred --ccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013331 119 --TKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 119 --~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
+.++|.+|..|+||||+|+..++.+++++|++.|++++.+|..|.|||++ |...++.++++.|++.+++..
T Consensus 246 ~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~----A~~~~~~~iv~~lL~~~~~~~ 318 (489)
T PHA02798 246 FSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFT----AFENESKFIFNSILNKKPNKN 318 (489)
T ss_pred HhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHH----HHHcCcHHHHHHHHccCCCHH
Confidence 12467788899999999999999999999999999999999999999999 455677889999988877643
No 23
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.93 E-value=1.6e-25 Score=225.43 Aligned_cols=163 Identities=33% Similarity=0.497 Sum_probs=146.8
Q ss_pred CHHHHHHHHHHhch--------------hhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHH
Q 013331 2 HVADIVKELLEARQ--------------EFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAA 67 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~--------------~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa 67 (445)
|..++++.+|+.+. ++.+..|.+|+||||+||+.|++++++.|+..|++++. +++++.||||.||
T Consensus 236 g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~-kn~d~~spLH~AA 314 (929)
T KOG0510|consen 236 GDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINS-KNKDEESPLHFAA 314 (929)
T ss_pred CCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccc-cCCCCCCchHHHH
Confidence 56777888776542 34456799999999999999999999999999999987 8999999999999
Q ss_pred HcCCHHHHHHHHh-cCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccC---CCCCCCCcHHHHHHhCCcHH
Q 013331 68 IKGRINIIDEILS-LNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLAN---MPDNDGNTILHLATAGKLTT 143 (445)
Q Consensus 68 ~~G~~~iv~~Ll~-~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n---~~d~~g~T~LHlA~~~~~~~ 143 (445)
..|+++.|+.|++ .+-...+..|..|.||||+|+++||..+++.|+++ |++.+ ..|.+|+||||+|+..|+..
T Consensus 315 ~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~---GA~~~~~~e~D~dg~TaLH~Aa~~g~~~ 391 (929)
T KOG0510|consen 315 IYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNK---GALFLNMSEADSDGNTALHLAAKYGNTS 391 (929)
T ss_pred HcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhc---ChhhhcccccccCCchhhhHHHHhccHH
Confidence 9999999999999 55556778888999999999999999999999998 55444 56999999999999999999
Q ss_pred HHHHHHhcCCCccccccCCCCHHHH
Q 013331 144 MVIYLLKLGVDVNAINRKGYTALDV 168 (445)
Q Consensus 144 iv~~Ll~~g~~~~~~n~~G~Tpl~~ 168 (445)
++++|+.+|++++.+|+.|.|++|+
T Consensus 392 av~~Li~~Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 392 AVQKLISHGADIGVKNKKGKSAFDT 416 (929)
T ss_pred HHHHHHHcCCceeeccccccccccc
Confidence 9999999999999999999999995
No 24
>PHA02946 ankyin-like protein; Provisional
Probab=99.93 E-value=8.3e-25 Score=221.41 Aligned_cols=180 Identities=22% Similarity=0.303 Sum_probs=158.4
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCC--HHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHH
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGH--LEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEIL 79 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~--~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll 79 (445)
|+.|+++.|++++.+++ .+|.+|.||||+|+..++ .++++.|+++|++++...|.+|.|||| ||..|+.++++.|+
T Consensus 83 g~~eiv~lLL~~GAdin-~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll 160 (446)
T PHA02946 83 NNNRIVAMLLTHGADPN-ACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIM 160 (446)
T ss_pred CCHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHH
Confidence 67899999999998886 789999999999998764 899999999999998767999999998 77789999999999
Q ss_pred hcCCCccccccccCcchHhHHHHcC--CHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCC--cHHHHHHHHhcCCCc
Q 013331 80 SLNLQSAEMRTIHGETVLHLTVKNN--QYEAVKYLMETLNITKLANMPDNDGNTILHLATAGK--LTTMVIYLLKLGVDV 155 (445)
Q Consensus 80 ~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~--~~~iv~~Ll~~g~~~ 155 (445)
+.+ ...+.+|..|+||||+|+..+ +.+++++|++. +..+|.+|.+|+||||+|+..+ +.+++++|++ |+++
T Consensus 161 ~~g-ad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~---Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadi 235 (446)
T PHA02946 161 SIG-FEARIVDKFGKNHIHRHLMSDNPKASTISWMMKL---GISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDV 235 (446)
T ss_pred hcc-ccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHc---CCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCC
Confidence 988 677889999999999998755 46899999987 7889999999999999999876 7889999885 8999
Q ss_pred cccccCCCCHHHHHhhhccccch-hcHHHHHHHhcCcc
Q 013331 156 NAINRKGYTALDVVESDASNSGA-LQIVPALEEAGARR 192 (445)
Q Consensus 156 ~~~n~~G~Tpl~~a~~~a~~~~~-~~i~~~L~~~ga~~ 192 (445)
|.+|..|.||||+|.. .++ .++++.|+..|+..
T Consensus 236 n~~d~~G~TpLh~A~~----~~~~~~~~~~Ll~~g~~~ 269 (446)
T PHA02946 236 NKQNKFGDSPLTLLIK----TLSPAHLINKLLSTSNVI 269 (446)
T ss_pred CCCCCCCCCHHHHHHH----hCChHHHHHHHHhCCCCC
Confidence 9999999999999644 333 47889999888643
No 25
>PHA02795 ankyrin-like protein; Provisional
Probab=99.92 E-value=1.9e-24 Score=212.56 Aligned_cols=185 Identities=21% Similarity=0.165 Sum_probs=160.7
Q ss_pred CHHHHHHHHHHhchhhh-----cCCCCCCChHHHHHHH--cCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHH
Q 013331 2 HVADIVKELLEARQEFA-----WKKDLNGHTPLHLSCS--KGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINI 74 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~-----~~~d~~G~TpLH~Aa~--~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~i 74 (445)
|..|+++.|+.++...+ -+.+..++|+||+|+. .|+.++|++|+++|++++. .++.||||.|+..|+.++
T Consensus 88 ~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~---~~~~t~lh~A~~~~~~eI 164 (437)
T PHA02795 88 TYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYK---IECLNAYFRGICKKESSV 164 (437)
T ss_pred chHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCC---CCCCCHHHHHHHcCcHHH
Confidence 56789999999988755 1477789999999999 9999999999999999965 345899999999999999
Q ss_pred HHHHHhcCCCccccc-----cccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHH
Q 013331 75 IDEILSLNLQSAEMR-----TIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL 149 (445)
Q Consensus 75 v~~Ll~~~~~~~~~~-----~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll 149 (445)
++.|+++|....+.. +..+.+++|.|+.+++.+++++|+++ ++++|.+|.+|.||||+|+..|+.+++++|+
T Consensus 165 Vk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~---GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL 241 (437)
T PHA02795 165 VEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPY---IEDINQLDAGGRTLLYRAIYAGYIDLVSWLL 241 (437)
T ss_pred HHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhC---cCCcCcCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999985433322 23478999999999999999999998 7889999999999999999999999999999
Q ss_pred hcCCCccccccCCCCHHHHHhhhcc----ccchhcHHHHHHHhcCcc
Q 013331 150 KLGVDVNAINRKGYTALDVVESDAS----NSGALQIVPALEEAGARR 192 (445)
Q Consensus 150 ~~g~~~~~~n~~G~Tpl~~a~~~a~----~~~~~~i~~~L~~~ga~~ 192 (445)
++|++++.+|..|.||||+|..... ...+.+++++|++.|+..
T Consensus 242 ~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI 288 (437)
T PHA02795 242 ENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSI 288 (437)
T ss_pred HCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCC
Confidence 9999999999999999999765442 234678999999988753
No 26
>PHA03095 ankyrin-like protein; Provisional
Probab=99.92 E-value=5e-24 Score=218.86 Aligned_cols=179 Identities=26% Similarity=0.297 Sum_probs=102.2
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHH--HcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcC--CHHHHHHH
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSC--SKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG--RINIIDEI 78 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa--~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G--~~~iv~~L 78 (445)
..++++.|++.+.+++ ..|..|.||||+|+ ..++.++++.|+++|++++. .|..|.||||+|+..+ +.++++.|
T Consensus 96 ~~~iv~lLl~~ga~in-~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~-~d~~g~tpL~~a~~~~~~~~~iv~~L 173 (471)
T PHA03095 96 TLDVIKLLIKAGADVN-AKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNA-LDLYGMTPLAVLLKSRNANVELLRLL 173 (471)
T ss_pred cHHHHHHHHHcCCCCC-CCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCCCHHHHHHH
Confidence 3677777777777765 66777788888877 44567777777777777765 6777777777777655 46677777
Q ss_pred HhcCCCccccccccCcchHhHHHHc--CCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcH--HHHHHHHhcCCC
Q 013331 79 LSLNLQSAEMRTIHGETVLHLTVKN--NQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLT--TMVIYLLKLGVD 154 (445)
Q Consensus 79 l~~~~~~~~~~~~~g~t~Lh~A~~~--g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~--~iv~~Ll~~g~~ 154 (445)
++.+... ...|..|+||||.|+.. ++.++++.|++. +..++.+|..|+||||+|+..++. .+++.|++.|++
T Consensus 174 l~~g~~~-~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~---g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~d 249 (471)
T PHA03095 174 IDAGADV-YAVDDRFRSLLHHHLQSFKPRARIVRELIRA---GCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGIS 249 (471)
T ss_pred HHcCCCC-cccCCCCCCHHHHHHHHCCCcHHHHHHHHHc---CCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCC
Confidence 7766433 22355566666665543 445555555544 334444444444444444444432 233444444444
Q ss_pred ccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013331 155 VNAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 155 ~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
+|.+|..|+||||+ |...++.+++++|++.|++
T Consensus 250 in~~d~~g~TpLh~----A~~~~~~~~v~~LL~~gad 282 (471)
T PHA03095 250 INARNRYGQTPLHY----AAVFNNPRACRRLIALGAD 282 (471)
T ss_pred CCCcCCCCCCHHHH----HHHcCCHHHHHHHHHcCCC
Confidence 44444444444444 2223334444444444444
No 27
>PHA03095 ankyrin-like protein; Provisional
Probab=99.91 E-value=1.2e-23 Score=216.10 Aligned_cols=184 Identities=24% Similarity=0.305 Sum_probs=163.1
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcC---CHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcC-CHHHHHHH
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSKG---HLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG-RINIIDEI 78 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g---~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G-~~~iv~~L 78 (445)
..|+++.|++.+.+++ ..|..|.||||+|+..| +.++++.|++.|++++. +|..|.||||+|+..| +.++++.|
T Consensus 26 ~~~~v~~Ll~~ga~vn-~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~-~~~~g~TpLh~A~~~~~~~~iv~lL 103 (471)
T PHA03095 26 TVEEVRRLLAAGADVN-FRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNA-PERCGFTPLHLYLYNATTLDVIKLL 103 (471)
T ss_pred CHHHHHHHHHcCCCcc-cCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCcHHHHHHH
Confidence 4689999999998877 77889999999999999 99999999999999987 7889999999999999 59999999
Q ss_pred HhcCCCccccccccCcchHhHHH--HcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCC--cHHHHHHHHhcCCC
Q 013331 79 LSLNLQSAEMRTIHGETVLHLTV--KNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGK--LTTMVIYLLKLGVD 154 (445)
Q Consensus 79 l~~~~~~~~~~~~~g~t~Lh~A~--~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~--~~~iv~~Ll~~g~~ 154 (445)
++++ ..++.+|..|+||||+|+ .+++.+++++|++. +..++.+|..|.||||+|+..+ ..+++++|++.|++
T Consensus 104 l~~g-a~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~---gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~ 179 (471)
T PHA03095 104 IKAG-ADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRK---GADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGAD 179 (471)
T ss_pred HHcC-CCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHc---CCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCC
Confidence 9998 567888999999999999 56689999999998 7789999999999999998866 68999999999999
Q ss_pred ccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013331 155 VNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 155 ~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
++..|..|.||+|.+... ..+..++++.|++.|+++..
T Consensus 180 ~~~~d~~g~t~Lh~~~~~--~~~~~~i~~~Ll~~g~~~~~ 217 (471)
T PHA03095 180 VYAVDDRFRSLLHHHLQS--FKPRARIVRELIRAGCDPAA 217 (471)
T ss_pred CcccCCCCCCHHHHHHHH--CCCcHHHHHHHHHcCCCCcc
Confidence 999999999999986532 23556789999999987543
No 28
>PHA02798 ankyrin-like protein; Provisional
Probab=99.91 E-value=9.3e-24 Score=217.50 Aligned_cols=181 Identities=20% Similarity=0.264 Sum_probs=156.8
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHc-----CCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcC---CHHH
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSK-----GHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG---RINI 74 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~-----g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G---~~~i 74 (445)
..|+++.|++.+.+++ ..|..|.||||.|+.. ++.++++.|+++|++++. +|.+|+||||+|+..| +.++
T Consensus 50 ~~~iv~~Ll~~Gadvn-~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~-~d~~G~TpLh~a~~~~~~~~~~i 127 (489)
T PHA02798 50 STDIVKLFINLGANVN-GLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINK-KNSDGETPLYCLLSNGYINNLEI 127 (489)
T ss_pred CHHHHHHHHHCCCCCC-CCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCC-CCCCcCcHHHHHHHcCCcChHHH
Confidence 5799999999999887 7889999999999864 779999999999999977 8999999999999986 7899
Q ss_pred HHHHHhcCCCccccccccCcchHhHHHHcCC---HHHHHHHHHhcCcccccCCCC-CCCCcHHHHHHhC----CcHHHHH
Q 013331 75 IDEILSLNLQSAEMRTIHGETVLHLTVKNNQ---YEAVKYLMETLNITKLANMPD-NDGNTILHLATAG----KLTTMVI 146 (445)
Q Consensus 75 v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~---~~~v~~Ll~~~~~~~~~n~~d-~~g~T~LHlA~~~----~~~~iv~ 146 (445)
++.|+++| .+++.+|.+|.||||+|+..|+ .+++++|++. +.++|.++ ..|.||||.++.. ++.++++
T Consensus 128 v~~Ll~~G-advn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~---gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk 203 (489)
T PHA02798 128 LLFMIENG-ADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK---GVDINTHNNKEKYDTLHCYFKYNIDRIDADILK 203 (489)
T ss_pred HHHHHHcC-CCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHh---CCCcccccCcCCCcHHHHHHHhccccCCHHHHH
Confidence 99999998 5678899999999999999988 9999999998 67788774 5789999998764 3678888
Q ss_pred HHHhcCCC---------------------------------------ccccccCCCCHHHHHhhhccccchhcHHHHHHH
Q 013331 147 YLLKLGVD---------------------------------------VNAINRKGYTALDVVESDASNSGALQIVPALEE 187 (445)
Q Consensus 147 ~Ll~~g~~---------------------------------------~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~ 187 (445)
+|+++|++ +|.+|..|.||||+ |...++.+++++|++
T Consensus 204 ~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~----A~~~~~~~~v~~LL~ 279 (489)
T PHA02798 204 LFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYY----SVSHNNRKIFEYLLQ 279 (489)
T ss_pred HHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHH----HHHcCcHHHHHHHHH
Confidence 88877654 45567789999999 455677889999999
Q ss_pred hcCccc
Q 013331 188 AGARRC 193 (445)
Q Consensus 188 ~ga~~~ 193 (445)
.|++..
T Consensus 280 ~GAdin 285 (489)
T PHA02798 280 LGGDIN 285 (489)
T ss_pred cCCccc
Confidence 999754
No 29
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.91 E-value=1.5e-23 Score=191.28 Aligned_cols=163 Identities=17% Similarity=0.164 Sum_probs=139.7
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcC--CHHHHHHHHhcCCCcccccc-ccCcch
Q 013331 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG--RINIIDEILSLNLQSAEMRT-IHGETV 96 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G--~~~iv~~Ll~~~~~~~~~~~-~~g~t~ 96 (445)
.....++||||.|+..|+.++|+.|++.. +. .|..|.||||+|+..+ +.++++.|++.++ .++.++ ..|.||
T Consensus 16 ~~~~~~~~pL~~A~~~~~~~~vk~Li~~~---n~-~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~ga-dvn~~~~~~g~Tp 90 (209)
T PHA02859 16 YLFYRYCNPLFYYVEKDDIEGVKKWIKFV---ND-CNDLYETPIFSCLEKDKVNVEILKFLIENGA-DVNFKTRDNNLSA 90 (209)
T ss_pred HHhhccCcHHHHHHHhCcHHHHHHHHHhh---hc-cCccCCCHHHHHHHcCCCCHHHHHHHHHCCC-CCCccCCCCCCCH
Confidence 34567899999999999999999999763 23 6889999999999855 8999999999994 556665 589999
Q ss_pred HhHHHHc---CCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHh--CCcHHHHHHHHhcCCCccccccCCCCHHHHHhh
Q 013331 97 LHLTVKN---NQYEAVKYLMETLNITKLANMPDNDGNTILHLATA--GKLTTMVIYLLKLGVDVNAINRKGYTALDVVES 171 (445)
Q Consensus 97 Lh~A~~~---g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~--~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~ 171 (445)
||+|+.. ++.+++++|+++ +..+|.+|.+|.||||+|+. .++.+++++|++.|++++.+|..|.||+|.+.
T Consensus 91 Lh~a~~~~~~~~~eiv~~Ll~~---gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a- 166 (209)
T PHA02859 91 LHHYLSFNKNVEPEILKILIDS---GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYI- 166 (209)
T ss_pred HHHHHHhCccccHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHH-
Confidence 9998864 479999999988 78899999999999999986 46899999999999999999999999999642
Q ss_pred hccccchhcHHHHHHHhcCccc
Q 013331 172 DASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 172 ~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
...++.+++++|++.|++..
T Consensus 167 --~~~~~~~iv~~Ll~~Gadi~ 186 (209)
T PHA02859 167 --LFHSDKKIFDFLTSLGIDIN 186 (209)
T ss_pred --HhcCCHHHHHHHHHcCCCCC
Confidence 23457889999999998654
No 30
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.91 E-value=5.2e-24 Score=202.65 Aligned_cols=176 Identities=27% Similarity=0.408 Sum_probs=156.3
Q ss_pred CHHHHHHHHHHhchh---hh-----cCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHH
Q 013331 2 HVADIVKELLEARQE---FA-----WKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRIN 73 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~---~~-----~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~ 73 (445)
|+.|+|++|+++... .. +-...+|-+||-.|+..||+++|+.|+++|++++. ......|||--||..|+.+
T Consensus 53 GH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~-tT~TNStPLraACfDG~le 131 (615)
T KOG0508|consen 53 GHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVND-TTRTNSTPLRAACFDGHLE 131 (615)
T ss_pred CcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccc-ccccCCccHHHHHhcchhH
Confidence 689999999995421 11 12345789999999999999999999999999987 5556679999999999999
Q ss_pred HHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCC
Q 013331 74 IIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGV 153 (445)
Q Consensus 74 iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~ 153 (445)
++|+|++++ .++++.|..|.|+||+|+..|+.+++++|++. ++++|.++..|||+||.|+..|+.+++++|+..|+
T Consensus 132 ivKyLvE~g-ad~~IanrhGhTcLmIa~ykGh~~I~qyLle~---gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga 207 (615)
T KOG0508|consen 132 IVKYLVEHG-ADPEIANRHGHTCLMIACYKGHVDIAQYLLEQ---GADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGA 207 (615)
T ss_pred HHHHHHHcC-CCCcccccCCCeeEEeeeccCchHHHHHHHHh---CCCcchhcccCchHHHhhhhcccHHHHHHHHhCCc
Confidence 999999988 78999999999999999999999999999998 88999999999999999999999999999999999
Q ss_pred CccccccCCCCHHHHHhhhccccchhcHHHHHHH
Q 013331 154 DVNAINRKGYTALDVVESDASNSGALQIVPALEE 187 (445)
Q Consensus 154 ~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~ 187 (445)
.++.-+ .|.|||-. +...++.++++.|++
T Consensus 208 ~i~~d~-~GmtPL~~----Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 208 KIDVDG-HGMTPLLL----AAVTGHTDIVERLLQ 236 (615)
T ss_pred eeeecC-CCCchHHH----HhhhcchHHHHHHhc
Confidence 987644 59999999 666778888888886
No 31
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.91 E-value=3.5e-23 Score=221.71 Aligned_cols=163 Identities=25% Similarity=0.251 Sum_probs=118.9
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
+..++++.|++.+.+++ ..|..|+||||+||..|+.++|++|+++|++++. .+.+|.||||+|+..|+.++++.|++.
T Consensus 156 ~~~~i~k~Ll~~Gadvn-~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~-~~~~g~t~L~~A~~~~~~~ivk~Ll~~ 233 (682)
T PHA02876 156 DELLIAEMLLEGGADVN-AKDIYCITPIHYAAERGNAKMVNLLLSYGADVNI-IALDDLSVLECAVDSKNIDTIKAIIDN 233 (682)
T ss_pred CcHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCc-cCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 46789999999999887 7788999999999999999999999999998865 677778888888888877777777654
Q ss_pred CCC----------------------------ccccccccCcchHhHHHHcCCH-HHHHHHHHhcCcccccCCCCCCCCcH
Q 013331 82 NLQ----------------------------SAEMRTIHGETVLHLTVKNNQY-EAVKYLMETLNITKLANMPDNDGNTI 132 (445)
Q Consensus 82 ~~~----------------------------~~~~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~~~~~~~~n~~d~~g~T~ 132 (445)
++. ..+..+..|.||||+|+..|+. +++++|++. +..++.+|.+|.||
T Consensus 234 ~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~---gadin~~d~~g~Tp 310 (682)
T PHA02876 234 RSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLER---GADVNAKNIKGETP 310 (682)
T ss_pred CCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHC---CCCCCCcCCCCCCH
Confidence 432 2333455677777777777764 466666665 55566666667777
Q ss_pred HHHHHhCC-cHHHHHHHHhcCCCccccccCCCCHHHHH
Q 013331 133 LHLATAGK-LTTMVIYLLKLGVDVNAINRKGYTALDVV 169 (445)
Q Consensus 133 LHlA~~~~-~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a 169 (445)
||+|+..| ..+++++|+..|++++..|..|.||||+|
T Consensus 311 Lh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A 348 (682)
T PHA02876 311 LYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQA 348 (682)
T ss_pred HHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHH
Confidence 77666666 35556666666666665555555555554
No 32
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90 E-value=2.4e-23 Score=226.26 Aligned_cols=161 Identities=27% Similarity=0.328 Sum_probs=136.7
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++.+.+++ ..|.+|+||||+||..|+.++++.|+++|++++. +|.+|+||||+|+..|+.++++.|++.
T Consensus 536 g~~~~l~~Ll~~G~d~n-~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~-~d~~G~TpL~~A~~~g~~~iv~~L~~~ 613 (823)
T PLN03192 536 GNAALLEELLKAKLDPD-IGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHI-RDANGNTALWNAISAKHHKIFRILYHF 613 (823)
T ss_pred CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHHhc
Confidence 67788999998888876 7788899999999999999999999999888866 788899999999999999999988876
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013331 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+... ....|.++||.|+.+|+.+++++|+++ +.++|.+|.+|+||||+|+..|+.+++++|+++|++++..|..
T Consensus 614 ~~~~---~~~~~~~~L~~Aa~~g~~~~v~~Ll~~---Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~ 687 (823)
T PLN03192 614 ASIS---DPHAAGDLLCTAAKRNDLTAMKELLKQ---GLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTD 687 (823)
T ss_pred Cccc---CcccCchHHHHHHHhCCHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCC
Confidence 5321 234577899999999999999999887 7788888999999999999999999999999999999998888
Q ss_pred C-CCHHHHHh
Q 013331 162 G-YTALDVVE 170 (445)
Q Consensus 162 G-~Tpl~~a~ 170 (445)
| .||.+++.
T Consensus 688 g~~t~~~l~~ 697 (823)
T PLN03192 688 DDFSPTELRE 697 (823)
T ss_pred CCCCHHHHHH
Confidence 8 88888753
No 33
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.90 E-value=7.7e-23 Score=219.08 Aligned_cols=180 Identities=26% Similarity=0.331 Sum_probs=121.4
Q ss_pred HHHHHHHHhchhhhcCCCCCCChHHHHHHHcC-CHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcC-CHHHHHHHHhcC
Q 013331 5 DIVKELLEARQEFAWKKDLNGHTPLHLSCSKG-HLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG-RINIIDEILSLN 82 (445)
Q Consensus 5 d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g-~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G-~~~iv~~Ll~~~ 82 (445)
++++.|++.+.+++ ..|..|.||||+|+..| +.++++.|++.|++++. .|..|.||||+|+..| +.++++.|++.+
T Consensus 288 ~iv~lLl~~gadin-~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~-~d~~g~TpLh~A~~~~~~~~iv~lLl~~g 365 (682)
T PHA02876 288 RLVPKLLERGADVN-AKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNA-ADRLYITPLHQASTLDRNKDIVITLLELG 365 (682)
T ss_pred HHHHHHHHCCCCCC-CcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCC-cccCCCcHHHHHHHhCCcHHHHHHHHHcC
Confidence 45666666665544 55666666666666666 46666666666666654 5666666666666643 456666666665
Q ss_pred CCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCc-HHHHHHHHhcCCCccccccC
Q 013331 83 LQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKL-TTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 83 ~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~-~~iv~~Ll~~g~~~~~~n~~ 161 (445)
..++.+|..|.||||+|+..|+.+++++|++. +..++..+..|.||||+|+..+. ..++++|+++|+++|.+|..
T Consensus 366 -adin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~---gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~ 441 (682)
T PHA02876 366 -ANVNARDYCDKTPIHYAAVRNNVVIINTLLDY---GADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKD 441 (682)
T ss_pred -CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCC
Confidence 45666677777777777777777777777776 56667777777777777776554 45567777788888888888
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013331 162 GYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
|+||||+|... ....+++++|++.|++..
T Consensus 442 G~TpLh~Aa~~---~~~~~iv~lLl~~Gad~n 470 (682)
T PHA02876 442 LSTPLHYACKK---NCKLDVIEMLLDNGADVN 470 (682)
T ss_pred CChHHHHHHHh---CCcHHHHHHHHHCCCCCC
Confidence 88888885321 224568888888887654
No 34
>PHA02917 ankyrin-like protein; Provisional
Probab=99.90 E-value=8.3e-23 Score=214.76 Aligned_cols=178 Identities=19% Similarity=0.218 Sum_probs=133.9
Q ss_pred HHHHHHHHHhchhhhcCCCCCCChHHHHHHHc---CCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCC---------
Q 013331 4 ADIVKELLEARQEFAWKKDLNGHTPLHLSCSK---GHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGR--------- 71 (445)
Q Consensus 4 ~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~---g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~--------- 71 (445)
.|.++.|+..+... ...|.+|+||||+||.. |+.++|+.||+.|++++. +|..|+||||.|+..|+
T Consensus 12 ~~~~~~l~~~~~~~-~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~-~~~~g~TpL~~Aa~~g~~~v~~~~~~ 89 (661)
T PHA02917 12 LDELKQMLRDRDPN-DTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLH-KNWRQLTPLEEYTNSRHVKVNKDIAM 89 (661)
T ss_pred HHHHHHHHhccCcc-cccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccc-cCCCCCCHHHHHHHcCChhHHHHHHH
Confidence 46788888755444 57799999999997655 789999999999999976 88999999998887665
Q ss_pred --------------------------HHHHHHHHhcCCCccccccccCcchHhHH--HHcCCHHHHHHHHHhcCcccccC
Q 013331 72 --------------------------INIIDEILSLNLQSAEMRTIHGETVLHLT--VKNNQYEAVKYLMETLNITKLAN 123 (445)
Q Consensus 72 --------------------------~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A--~~~g~~~~v~~Ll~~~~~~~~~n 123 (445)
.++++.|+++| .+++.+|.+|+||||.| +.+|+.+++++|+++ ++.+|
T Consensus 90 ~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~G-adin~~d~~g~T~L~~~~a~~~~~~eivklLi~~---Ga~vn 165 (661)
T PHA02917 90 ALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHG-FDLSVKCENHRSVIENYVMTDDPVPEIIDLFIEN---GCSVL 165 (661)
T ss_pred HHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcC-CCCCccCCCCccHHHHHHHccCCCHHHHHHHHHc---CCCcc
Confidence 34444455554 45566777889999854 357889999999887 66666
Q ss_pred CCCC---CC-----------CcHHHHHHh-----------CCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccch
Q 013331 124 MPDN---DG-----------NTILHLATA-----------GKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGA 178 (445)
Q Consensus 124 ~~d~---~g-----------~T~LHlA~~-----------~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~ 178 (445)
.+|. .| .||||+|+. .++.+++++|++.|+++|.+|.+|.||||++.. .++
T Consensus 166 ~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~----~g~ 241 (661)
T PHA02917 166 YEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIK----SSH 241 (661)
T ss_pred ccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHH----cCC
Confidence 5543 23 499999875 457889999999999999999999999998543 333
Q ss_pred --hcHHHHHHHhcCcc
Q 013331 179 --LQIVPALEEAGARR 192 (445)
Q Consensus 179 --~~i~~~L~~~ga~~ 192 (445)
.+++++|++ |++.
T Consensus 242 ~~~eivk~Li~-g~d~ 256 (661)
T PHA02917 242 IDIDIVKLLMK-GIDN 256 (661)
T ss_pred CcHHHHHHHHh-CCcc
Confidence 468888875 6543
No 35
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.90 E-value=1.5e-22 Score=208.90 Aligned_cols=184 Identities=16% Similarity=0.245 Sum_probs=159.1
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHc--CCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcC------CHHH
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSK--GHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG------RINI 74 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~--g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G------~~~i 74 (445)
..|+++.|++.+.+++.. ..|.||||.++.. ++.++|+.|+++|++++. ++ .+.||||.|+..+ +.++
T Consensus 15 ~~~~v~~LL~~GadvN~~--~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~-~~-~~~tpL~~a~~~~~~~~~~~~~i 90 (494)
T PHA02989 15 DKNALEFLLRTGFDVNEE--YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNY-KG-YIETPLCAVLRNREITSNKIKKI 90 (494)
T ss_pred cHHHHHHHHHcCCCcccc--cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccC-CC-CCCCcHHHHHhccCcchhhHHHH
Confidence 468999999999998754 5699999876654 379999999999999986 44 6799999998754 4789
Q ss_pred HHHHHhcCCCccccccccCcchHhHHHHc---CCHHHHHHHHHhcCccccc-CCCCCCCCcHHHHHHhC--CcHHHHHHH
Q 013331 75 IDEILSLNLQSAEMRTIHGETVLHLTVKN---NQYEAVKYLMETLNITKLA-NMPDNDGNTILHLATAG--KLTTMVIYL 148 (445)
Q Consensus 75 v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~-n~~d~~g~T~LHlA~~~--~~~~iv~~L 148 (445)
++.|+++| .+++.+|..|.||||.|+.. |+.+++++|+++ |+++ +.+|..|+||||+|+.. ++.+++++|
T Consensus 91 v~~Ll~~G-adin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~---Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~L 166 (494)
T PHA02989 91 VKLLLKFG-ADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSK---GINVNDVKNSRGYNLLHMYLESFSVKKDVIKIL 166 (494)
T ss_pred HHHHHHCC-CCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHC---CCCcccccCCCCCCHHHHHHHhccCCHHHHHHH
Confidence 99999999 56888999999999998765 678999999998 7888 78999999999998764 589999999
Q ss_pred HhcCCCccc-cccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013331 149 LKLGVDVNA-INRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 149 l~~g~~~~~-~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
+++|++++. .|..|.||++++...+...++.+++++|++.|++...
T Consensus 167 l~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~ 213 (494)
T PHA02989 167 LSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIET 213 (494)
T ss_pred HHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccc
Confidence 999999998 6889999999987777777889999999999987543
No 36
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.88 E-value=1.2e-22 Score=187.71 Aligned_cols=163 Identities=26% Similarity=0.345 Sum_probs=141.6
Q ss_pred cCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHc-----CCHHHHHHHHhcCCCccccc-ccc
Q 013331 19 WKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIK-----GRINIIDEILSLNLQSAEMR-TIH 92 (445)
Q Consensus 19 ~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~-----G~~~iv~~Ll~~~~~~~~~~-~~~ 92 (445)
+.-|.+|+|+||||+.++++++|+.||+.|.--...+|+-|+||+++|+.. .+.++|..|...+. ++.+ ...
T Consensus 262 NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgn--VNaKAsQ~ 339 (452)
T KOG0514|consen 262 NLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGD--VNAKASQH 339 (452)
T ss_pred hhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccC--cchhhhhh
Confidence 466999999999999999999999999988544455899999999999863 46789999999873 3333 347
Q ss_pred CcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHH-hcCCCccccccCCCCHHHHHhh
Q 013331 93 GETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL-KLGVDVNAINRKGYTALDVVES 171 (445)
Q Consensus 93 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll-~~g~~~~~~n~~G~Tpl~~a~~ 171 (445)
|+|+|++|+.+|+.++|+.|+.. ++++|.+|.+|.|+|++|+.+||.+++++|| ..++|+...|.+|.|+|.+
T Consensus 340 gQTALMLAVSHGr~d~vk~LLac---gAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~I--- 413 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLAC---GADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSI--- 413 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHc---cCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhh---
Confidence 99999999999999999999876 8999999999999999999999999999999 7899999999999999999
Q ss_pred hccccchhcHHHHHHHhcC
Q 013331 172 DASNSGALQIVPALEEAGA 190 (445)
Q Consensus 172 ~a~~~~~~~i~~~L~~~ga 190 (445)
+-..++.+|.-+|..+.-
T Consensus 414 -Aleagh~eIa~mlYa~~n 431 (452)
T KOG0514|consen 414 -ALEAGHREIAVMLYAHMN 431 (452)
T ss_pred -HHhcCchHHHHHHHHHHH
Confidence 556677788877765443
No 37
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.88 E-value=6.7e-22 Score=215.01 Aligned_cols=162 Identities=28% Similarity=0.327 Sum_probs=146.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHH
Q 013331 22 DLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTV 101 (445)
Q Consensus 22 d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~ 101 (445)
+.++.++||.||..|+.++++.|++.|++++. .|.+|+||||+||..|+.++++.|++++ .+++.+|.+|.||||.|+
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~-~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g-adin~~d~~G~TpL~~A~ 599 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDI-GDSKGRTPLHIAASKGYEDCVLVLLKHA-CNVHIRDANGNTALWNAI 599 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcChHHHHHHHHhcC-CCCCCcCCCCCCHHHHHH
Confidence 44578999999999999999999999999977 8999999999999999999999999987 678889999999999999
Q ss_pred HcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcH
Q 013331 102 KNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQI 181 (445)
Q Consensus 102 ~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i 181 (445)
..|+.+++++|++. +... .+..|.++||.|+..|+.++++.|+++|+++|.+|.+|.||||+ |...++.++
T Consensus 600 ~~g~~~iv~~L~~~---~~~~--~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~----A~~~g~~~i 670 (823)
T PLN03192 600 SAKHHKIFRILYHF---ASIS--DPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQV----AMAEDHVDM 670 (823)
T ss_pred HhCCHHHHHHHHhc---Cccc--CcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHH----HHHCCcHHH
Confidence 99999999999976 2222 24567899999999999999999999999999999999999999 556678899
Q ss_pred HHHHHHhcCcccC
Q 013331 182 VPALEEAGARRCD 194 (445)
Q Consensus 182 ~~~L~~~ga~~~~ 194 (445)
+++|+++|++...
T Consensus 671 v~~Ll~~GAdv~~ 683 (823)
T PLN03192 671 VRLLIMNGADVDK 683 (823)
T ss_pred HHHHHHcCCCCCC
Confidence 9999999987653
No 38
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.86 E-value=3.4e-21 Score=169.27 Aligned_cols=141 Identities=20% Similarity=0.249 Sum_probs=123.0
Q ss_pred CCCCCCChHHHHHHHcCCH----HHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHH---HHHHHhcCCCcccccc-c
Q 013331 20 KKDLNGHTPLHLSCSKGHL----EITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINI---IDEILSLNLQSAEMRT-I 91 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~----~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~i---v~~Ll~~~~~~~~~~~-~ 91 (445)
..+.++.++||.||+.|+. ++++.|++.++.++. +|.+|+||||+|+..|+.+. +++|++.+ ..++.++ .
T Consensus 15 ~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~-~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G-adin~~d~~ 92 (166)
T PHA02743 15 EIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHR-YDHHGRQCTHMVAWYDRANAVMKIELLVNMG-ADINARELG 92 (166)
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhc-cCCCCCcHHHHHHHhCccCHHHHHHHHHHcC-CCCCCCCCC
Confidence 5667888999999999998 666677788888765 89999999999999998654 78999988 5677777 5
Q ss_pred cCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCC
Q 013331 92 HGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYT 164 (445)
Q Consensus 92 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~T 164 (445)
.|.||||+|+..|+.+++++|++. .+..++.+|.+|.||||+|+..++.+++++|+++|++++.++..|..
T Consensus 93 ~g~TpLh~A~~~g~~~iv~~Ll~~--~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 163 (166)
T PHA02743 93 TGNTLLHIAASTKNYELAEWLCRQ--LGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS 163 (166)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhc--cCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence 899999999999999999999953 16678899999999999999999999999999999999999887753
No 39
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86 E-value=6.5e-22 Score=188.41 Aligned_cols=166 Identities=30% Similarity=0.392 Sum_probs=148.3
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhc-CCCCCCC-------CCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccc
Q 013331 20 KKDLNGHTPLHLSCSKGHLEITRELLKL-DPDLSSL-------PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTI 91 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~-~~~~~~~-------~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~ 91 (445)
..+.+|.|||-+||++||.++|++|+++ ++++... ..-+|-+||..|+..||.++|+.|++++ ...+..+.
T Consensus 37 ~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~g-a~VN~tT~ 115 (615)
T KOG0508|consen 37 GEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRG-ASVNDTTR 115 (615)
T ss_pred ccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhc-Cccccccc
Confidence 4456789999999999999999999994 3332110 2346789999999999999999999999 77887787
Q ss_pred cCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhh
Q 013331 92 HGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVES 171 (445)
Q Consensus 92 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~ 171 (445)
...|||.-||.-|+.++++||+++ +++++..|..|.|.||+|+..|+.+|+++|++.|+|+|.++..|.|+||.
T Consensus 116 TNStPLraACfDG~leivKyLvE~---gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~--- 189 (615)
T KOG0508|consen 116 TNSTPLRAACFDGHLEIVKYLVEH---GADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHD--- 189 (615)
T ss_pred cCCccHHHHHhcchhHHHHHHHHc---CCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHh---
Confidence 888999999999999999999998 88899999999999999999999999999999999999999999999999
Q ss_pred hccccchhcHHHHHHHhcCccc
Q 013331 172 DASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 172 ~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
....++.+++++|+.+|+...
T Consensus 190 -caEsG~vdivq~Ll~~ga~i~ 210 (615)
T KOG0508|consen 190 -CAESGSVDIVQLLLKHGAKID 210 (615)
T ss_pred -hhhcccHHHHHHHHhCCceee
Confidence 677889999999999998754
No 40
>PHA02917 ankyrin-like protein; Provisional
Probab=99.86 E-value=5.3e-21 Score=201.19 Aligned_cols=183 Identities=22% Similarity=0.184 Sum_probs=147.1
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcC-----------------------------------CHHHHHHHhh
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKG-----------------------------------HLEITRELLK 46 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g-----------------------------------~~~iv~~LL~ 46 (445)
|+.|+|+.|++.+.+++ ..|..|+||||+|+..| +.++|++|++
T Consensus 46 ~~~~~v~~Ll~~ga~v~-~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~ 124 (661)
T PHA02917 46 NNVEVVKLLLDSGTNPL-HKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVE 124 (661)
T ss_pred CcHHHHHHHHHCCCCcc-ccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHH
Confidence 56899999999998886 77889999999888654 4567888888
Q ss_pred cCCCCCCCCCCCCccHHHHHH--HcCCHHHHHHHHhcCCCccccccc---cC-----------cchHhHHHH--------
Q 013331 47 LDPDLSSLPDNEGRTPLHWAA--IKGRINIIDEILSLNLQSAEMRTI---HG-----------ETVLHLTVK-------- 102 (445)
Q Consensus 47 ~~~~~~~~~d~~G~TpLh~Aa--~~G~~~iv~~Ll~~~~~~~~~~~~---~g-----------~t~Lh~A~~-------- 102 (445)
+|++++. +|.+|+||||.|+ ..|+.+++++|+++|. .++.+|. .| .||||+|+.
T Consensus 125 ~Gadin~-~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga-~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~ 202 (661)
T PHA02917 125 HGFDLSV-KCENHRSVIENYVMTDDPVPEIIDLFIENGC-SVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESD 202 (661)
T ss_pred cCCCCCc-cCCCCccHHHHHHHccCCCHHHHHHHHHcCC-CccccccccccccccccccccccccHHHHHHhhccccccc
Confidence 8888876 8999999999654 5789999999999984 4433332 23 699999986
Q ss_pred ---cCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcH--HHHHHHHhcCCCcc----ccccCCCCHHHHHhhhc
Q 013331 103 ---NNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLT--TMVIYLLKLGVDVN----AINRKGYTALDVVESDA 173 (445)
Q Consensus 103 ---~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~--~iv~~Ll~~g~~~~----~~n~~G~Tpl~~a~~~a 173 (445)
+++.+++++|++. ++++|.+|.+|+||||+|+..++. +++++|++ |++++ ..|..|.+|++++.-..
T Consensus 203 ~~~~~~~eiv~~Li~~---Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~ 278 (661)
T PHA02917 203 TRAYVRPEVVKCLINH---GIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLN 278 (661)
T ss_pred ccccCcHHHHHHHHHC---CCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHH
Confidence 5689999999998 889999999999999999999975 79999975 88775 45667888777754111
Q ss_pred -----cccchhcHHHHHHHhcCc
Q 013331 174 -----SNSGALQIVPALEEAGAR 191 (445)
Q Consensus 174 -----~~~~~~~i~~~L~~~ga~ 191 (445)
......+++++|+++|+.
T Consensus 279 ~~~~~~~~v~~~iv~~Li~~Ga~ 301 (661)
T PHA02917 279 SDYRYNKDVDLDLVKLFLENGKP 301 (661)
T ss_pred hhccccccchHHHHHHHHhCCCC
Confidence 112367899999999985
No 41
>PHA02741 hypothetical protein; Provisional
Probab=99.86 E-value=7.8e-21 Score=167.63 Aligned_cols=134 Identities=20% Similarity=0.306 Sum_probs=108.6
Q ss_pred hhcCCCCCCChHHHHHHHcCCHHHHHHHhhc------CCCCCCCCCCCCccHHHHHHHcCC----HHHHHHHHhcCCCcc
Q 013331 17 FAWKKDLNGHTPLHLSCSKGHLEITRELLKL------DPDLSSLPDNEGRTPLHWAAIKGR----INIIDEILSLNLQSA 86 (445)
Q Consensus 17 ~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~------~~~~~~~~d~~G~TpLh~Aa~~G~----~~iv~~Ll~~~~~~~ 86 (445)
+....|..|.||||+|++.|+.++++.|+.. +++++. +|..|+||||+|+..|+ .++++.|++.+ ..+
T Consensus 13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~-~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g-adi 90 (169)
T PHA02741 13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNA-TDDAGQMCIHIAAEKHEAQLAAEIIDHLIELG-ADI 90 (169)
T ss_pred HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhc-cCCCCCcHHHHHHHcCChHHHHHHHHHHHHcC-CCC
Confidence 3446788899999999999999999988642 455554 78899999999999998 47888888887 455
Q ss_pred ccccc-cCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCC
Q 013331 87 EMRTI-HGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD 154 (445)
Q Consensus 87 ~~~~~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~ 154 (445)
+.++. +|+||||+|+..++.+++++|+... +..++.+|.+|.||||+|+..++.+++++|++.++.
T Consensus 91 n~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~--g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 91 NAQEMLEGDTALHLAAHRRDHDLAEWLCCQP--GIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred CCCCcCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 66664 8999999999999999999988632 456788888999999999999999999888876544
No 42
>PHA02795 ankyrin-like protein; Provisional
Probab=99.85 E-value=9.5e-21 Score=186.45 Aligned_cols=174 Identities=13% Similarity=0.040 Sum_probs=146.4
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCC-----CCCCccHHHHHHHcCCHHHHH
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLP-----DNEGRTPLHWAAIKGRINIID 76 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~-----d~~G~TpLh~Aa~~G~~~iv~ 76 (445)
|+.|+|+.|++++.+++. .++.||||.|+..|+.++++.|+++|++..... +..|.||+|.|+..++.++++
T Consensus 129 n~~eiV~~LI~~GADIn~---~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve 205 (437)
T PHA02795 129 VEIDIVDFMVDHGAVIYK---IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYK 205 (437)
T ss_pred CCHHHHHHHHHCCCCCCC---CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHH
Confidence 688999999999999863 356899999999999999999999997543322 234789999999999999999
Q ss_pred HHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCC--------cHHHHHHH
Q 013331 77 EILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGK--------LTTMVIYL 148 (445)
Q Consensus 77 ~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~--------~~~iv~~L 148 (445)
.|++++ ...+.+|..|.||||+|+.+|+.+++++|+++ ++.+|.+|.+|.||||+|+..| +.+++++|
T Consensus 206 ~LIs~G-ADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~---GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelL 281 (437)
T PHA02795 206 LCIPYI-EDINQLDAGGRTLLYRAIYAGYIDLVSWLLEN---GANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEIL 281 (437)
T ss_pred HHHhCc-CCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHH
Confidence 999998 67889999999999999999999999999988 8899999999999999999988 46999999
Q ss_pred HhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013331 149 LKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 149 l~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
+++|++++.....+ +.. ...+.++++.+++....
T Consensus 282 L~~gadI~~~~~~~---~~~------~~~n~~~ik~lI~y~~~ 315 (437)
T PHA02795 282 LREPLSIDCIKLAI---LNN------TIENHDVIKLCIKYFMM 315 (437)
T ss_pred HhCCCCCCchhHHh---hhc------ccchHHHHHHHHHHHHh
Confidence 99999987754322 111 11255688888776643
No 43
>PHA02730 ankyrin-like protein; Provisional
Probab=99.84 E-value=4.1e-20 Score=190.27 Aligned_cols=109 Identities=24% Similarity=0.269 Sum_probs=78.7
Q ss_pred HHHHHHHHhchhhhcCCCCCCChHHHHHHHcC---CHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcC--CHHHHHHHH
Q 013331 5 DIVKELLEARQEFAWKKDLNGHTPLHLSCSKG---HLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG--RINIIDEIL 79 (445)
Q Consensus 5 d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g---~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G--~~~iv~~Ll 79 (445)
+.++..++...++++.+|.+|+||||+|+..| +.++|++||++|++++. +|.+|+||||+|+..| +.++++.|+
T Consensus 21 ~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~-kD~~G~TPLh~Aa~~~~~~~eIv~~Ll 99 (672)
T PHA02730 21 KKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLC-RNNEGLTPLGVYSKRKYVKSQIVHLLI 99 (672)
T ss_pred HHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcc-cCCCCCChHHHHHHcCCCcHHHHHHHH
Confidence 34566666666777788888999999998886 48899999999988876 7888999999888866 688888888
Q ss_pred hcCC-CccccccccCcchHhHHHH--cCCHHHHHHHHH
Q 013331 80 SLNL-QSAEMRTIHGETVLHLTVK--NNQYEAVKYLME 114 (445)
Q Consensus 80 ~~~~-~~~~~~~~~g~t~Lh~A~~--~g~~~~v~~Ll~ 114 (445)
+.+. ...+..+..+.+|||.++. +++.+++++|+.
T Consensus 100 ~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~ 137 (672)
T PHA02730 100 SSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIV 137 (672)
T ss_pred hcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHH
Confidence 8753 2223344445555555555 555566666653
No 44
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.84 E-value=9.9e-21 Score=164.47 Aligned_cols=135 Identities=20% Similarity=0.271 Sum_probs=107.4
Q ss_pred hhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCC--C----CCCCCCCCCccHHHHHHHcCCHH---HHHHHHhcCCCccc
Q 013331 17 FAWKKDLNGHTPLHLSCSKGHLEITRELLKLDP--D----LSSLPDNEGRTPLHWAAIKGRIN---IIDEILSLNLQSAE 87 (445)
Q Consensus 17 ~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~--~----~~~~~d~~G~TpLh~Aa~~G~~~---iv~~Ll~~~~~~~~ 87 (445)
+....|.+|.||||+||..|+. ++.+...+. + ....+|.+|+||||+|+..|+.+ +++.|++.+ ...+
T Consensus 9 ~~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g-adin 85 (154)
T PHA02736 9 FASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG-ADIN 85 (154)
T ss_pred HHHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcC-CCcc
Confidence 4457888999999999999984 333332221 1 12236889999999999999874 678889888 4566
Q ss_pred ccc-ccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCcc
Q 013331 88 MRT-IHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVN 156 (445)
Q Consensus 88 ~~~-~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~ 156 (445)
.++ ..|+||||+|+..|+.+++++|+... +.+++.+|..|.||||+|+..++.+++++|++.|++.+
T Consensus 86 ~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~--g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 86 GKERVFGNTPLHIAVYTQNYELATWLCNQP--GVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHhCC--CCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 676 48999999999999999999998632 56788899999999999999999999999999988765
No 45
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.84 E-value=1.5e-20 Score=200.68 Aligned_cols=176 Identities=31% Similarity=0.416 Sum_probs=140.0
Q ss_pred HHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCcc
Q 013331 7 VKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSA 86 (445)
Q Consensus 7 v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~ 86 (445)
...+++.+.+++ .....|.||||+|+..||.++++.|++.++.... ..+.|.||||.|+..+.+.+++.+++++ ...
T Consensus 457 ~~~l~~~g~~~n-~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~-~~~~~l~~lhla~~~~~v~~~~~l~~~g-a~v 533 (1143)
T KOG4177|consen 457 ARLLLQYGADPN-AVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNL-DAKKGLTPLHLAADEDTVKVAKILLEHG-ANV 533 (1143)
T ss_pred hhhHhhcCCCcc-hhccccCcchhhhhccCCchHHHHhhhcCCccCc-cchhccchhhhhhhhhhHHHHHHHhhcC-Cce
Confidence 333444443333 4555666777777777777666666666644433 4556667777777777777777777666 566
Q ss_pred ccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHH
Q 013331 87 EMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTAL 166 (445)
Q Consensus 87 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl 166 (445)
+.++.+|.||||.|+.+|+.++|++|+++ +++++.+|+.|.||||.|+..|+.+++.+|+++|+++|..|.+|.|||
T Consensus 534 ~~~~~r~~TpLh~A~~~g~v~~VkfLLe~---gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL 610 (1143)
T KOG4177|consen 534 DLRTGRGYTPLHVAVHYGNVDLVKFLLEH---GADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPL 610 (1143)
T ss_pred ehhcccccchHHHHHhcCCchHHHHhhhC---CccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchh
Confidence 77788899999999999999999999999 889999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccchhcHHHHHHHhcCcc
Q 013331 167 DVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 167 ~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
++ +...+..++.+.|...++..
T Consensus 611 ~i----A~~lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 611 HI----AVRLGYLSVVKLLKVVTATP 632 (1143)
T ss_pred HH----HHHhcccchhhHHHhccCcc
Confidence 99 66778888999999888874
No 46
>PHA02741 hypothetical protein; Provisional
Probab=99.83 E-value=6.3e-20 Score=161.87 Aligned_cols=141 Identities=21% Similarity=0.303 Sum_probs=120.1
Q ss_pred CHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC-----CCccccccccCcchHhHHHHcCC----HH
Q 013331 37 HLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN-----LQSAEMRTIHGETVLHLTVKNNQ----YE 107 (445)
Q Consensus 37 ~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~-----~~~~~~~~~~g~t~Lh~A~~~g~----~~ 107 (445)
+..|++.++. .+|..|.||||+|+..|+.++++.|+... +..++.+|..|.||||+|+..|+ .+
T Consensus 6 ~~~~~~~~~~-------~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ 78 (169)
T PHA02741 6 FMTCLEEMIA-------EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAE 78 (169)
T ss_pred HHHHHHHHhh-------ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHH
Confidence 4456666553 26788999999999999999999986532 24578889999999999999999 58
Q ss_pred HHHHHHHhcCcccccCCCCC-CCCcHHHHHHhCCcHHHHHHHHh-cCCCccccccCCCCHHHHHhhhccccchhcHHHHH
Q 013331 108 AVKYLMETLNITKLANMPDN-DGNTILHLATAGKLTTMVIYLLK-LGVDVNAINRKGYTALDVVESDASNSGALQIVPAL 185 (445)
Q Consensus 108 ~v~~Ll~~~~~~~~~n~~d~-~g~T~LHlA~~~~~~~iv~~Ll~-~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L 185 (445)
++++|++. +..+|.+|. +|+||||+|+..++.+++++|++ .|++++..|.+|+|||++ +...++.+++++|
T Consensus 79 ii~~Ll~~---gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~----A~~~~~~~iv~~L 151 (169)
T PHA02741 79 IIDHLIEL---GADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFEL----AIDNEDVAMMQIL 151 (169)
T ss_pred HHHHHHHc---CCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHH----HHHCCCHHHHHHH
Confidence 88999887 778899885 99999999999999999999996 699999999999999999 4555677899999
Q ss_pred HHhcCc
Q 013331 186 EEAGAR 191 (445)
Q Consensus 186 ~~~ga~ 191 (445)
++.++.
T Consensus 152 ~~~~~~ 157 (169)
T PHA02741 152 REIVAT 157 (169)
T ss_pred HHHHHH
Confidence 988765
No 47
>PHA02730 ankyrin-like protein; Provisional
Probab=99.83 E-value=1.2e-19 Score=186.76 Aligned_cols=179 Identities=17% Similarity=0.159 Sum_probs=145.7
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcC--CHHHHHHHhhcCCCC--CCCCCCCCccHHHHHHH--cCCHHHH
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKG--HLEITRELLKLDPDL--SSLPDNEGRTPLHWAAI--KGRINII 75 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g--~~~iv~~LL~~~~~~--~~~~d~~G~TpLh~Aa~--~G~~~iv 75 (445)
++.|+|+.|++++++++ .+|..|+||||+|+..| +.|+|+.|++.|++. .. .+..+.+|||.++. +++.+++
T Consensus 55 ~~~eivklLLs~GAdin-~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~-~~~~~d~~l~~y~~s~n~~~~~v 132 (672)
T PHA02730 55 TDIKIVRLLLSRGVERL-CRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNEL-TSNINDFDLYSYMSSDNIDLRLL 132 (672)
T ss_pred CcHHHHHHHHhCCCCCc-ccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccc-ccccCCchHHHHHHhcCCcHHHH
Confidence 35899999999999987 78999999999999977 799999999996544 54 67778999999998 9999999
Q ss_pred HHHHhcCCCcccccc-----ccCcchHhHHHHcCCHHHHHHHHHhcCcccccC-------CCCCCC-CcHHHHHH-----
Q 013331 76 DEILSLNLQSAEMRT-----IHGETVLHLTVKNNQYEAVKYLMETLNITKLAN-------MPDNDG-NTILHLAT----- 137 (445)
Q Consensus 76 ~~Ll~~~~~~~~~~~-----~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n-------~~d~~g-~T~LHlA~----- 137 (445)
++|+..+...++... ..|.+|++++..+++.++|++|+++ ++.++ ..|..+ .|.||++.
T Consensus 133 k~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~---g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~ 209 (672)
T PHA02730 133 KYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKS---ECYSTGYVFRSCMYDSDRCKNSLHYYILSHRE 209 (672)
T ss_pred HHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHc---CCcccccccccccccCCccchhHHHHHHhhhh
Confidence 999974433433332 2789999999999999999999998 55453 233344 46666443
Q ss_pred -hCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHH
Q 013331 138 -AGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEE 187 (445)
Q Consensus 138 -~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~ 187 (445)
..+..+++++|+++|+++|.+|..|.||||+.. +...++.+++++|++
T Consensus 210 ~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~--~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 210 SESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYW--SCSTIDIEIVKLLIK 258 (672)
T ss_pred hhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH--HcCcccHHHHHHHHh
Confidence 456899999999999999999999999999622 445566899999998
No 48
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.83 E-value=6.4e-20 Score=153.28 Aligned_cols=142 Identities=27% Similarity=0.301 Sum_probs=129.6
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHH
Q 013331 28 PLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYE 107 (445)
Q Consensus 28 pLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~ 107 (445)
-+.+|+..+.+..|+.||+..++..+.+|.+|+||||-|+.+|+.+|++.|+..+ ...+.++..|+||||.|++-++.+
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~g-An~~a~T~~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSG-ANKEAKTNEGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHcc-CCcccccccCccchhhhhcccchh
Confidence 4689999999999999999999988889999999999999999999999999998 678889999999999999999999
Q ss_pred HHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcH-HHHHHHH-hcCCCccccccCCCCHHHHHhhhc
Q 013331 108 AVKYLMETLNITKLANMPDNDGNTILHLATAGKLT-TMVIYLL-KLGVDVNAINRKGYTALDVVESDA 173 (445)
Q Consensus 108 ~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~-~iv~~Ll-~~g~~~~~~n~~G~Tpl~~a~~~a 173 (445)
++..|+++ ++++|++.....||||+|+...+. ..+.+|+ ++++++..+|+.+.||+++|.+..
T Consensus 145 va~~LLqh---gaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 145 VAGRLLQH---GADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred HHHHHHhc---cCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence 99999998 889999999999999999987654 4556666 899999999999999999976554
No 49
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.82 E-value=1.2e-20 Score=163.28 Aligned_cols=175 Identities=25% Similarity=0.314 Sum_probs=139.4
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCC-------------------------------CC
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDP-------------------------------DL 51 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~-------------------------------~~ 51 (445)
+.|++.....-+|+-+...|.+|++++|.|+-+|+...+..+|.++. .+
T Consensus 74 nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~V 153 (296)
T KOG0502|consen 74 NSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKV 153 (296)
T ss_pred CcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhccc
Confidence 45566666666666555666666666666666666555555444332 22
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCc
Q 013331 52 SSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNT 131 (445)
Q Consensus 52 ~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T 131 (445)
+. .|+.|.|||.+|+..|++++|++|++.| ..+....+..+++|.+|++.|..++|++|+.+ +.++|..|.+|-|
T Consensus 154 N~-~De~GfTpLiWAaa~G~i~vV~fLL~~G-Adp~~lgk~resALsLAt~ggytdiV~lLL~r---~vdVNvyDwNGgT 228 (296)
T KOG0502|consen 154 NA-CDEFGFTPLIWAAAKGHIPVVQFLLNSG-ADPDALGKYRESALSLATRGGYTDIVELLLTR---EVDVNVYDWNGGT 228 (296)
T ss_pred cC-ccccCchHhHHHHhcCchHHHHHHHHcC-CChhhhhhhhhhhHhHHhcCChHHHHHHHHhc---CCCcceeccCCCc
Confidence 23 6999999999999999999999999998 56777788899999999999999999999987 7789999999999
Q ss_pred HHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHH
Q 013331 132 ILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEE 187 (445)
Q Consensus 132 ~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~ 187 (445)
||-+|++.++.+|++.|+..|++++..+..|++++++|. ..++. +++..++
T Consensus 229 pLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAV----alGyr-~Vqqvie 279 (296)
T KOG0502|consen 229 PLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAV----ALGYR-IVQQVIE 279 (296)
T ss_pred eeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHH----HhhhH-HHHHHHH
Confidence 999999999999999999999999999999999999954 44444 4444444
No 50
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.82 E-value=3.6e-19 Score=168.80 Aligned_cols=157 Identities=17% Similarity=0.065 Sum_probs=130.5
Q ss_pred cCCCCCCCh-HHHHHHHcCCHHHHHHHhhcCCCCCCC---CCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccc-cccC
Q 013331 19 WKKDLNGHT-PLHLSCSKGHLEITRELLKLDPDLSSL---PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMR-TIHG 93 (445)
Q Consensus 19 ~~~d~~G~T-pLH~Aa~~g~~~iv~~LL~~~~~~~~~---~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~-~~~g 93 (445)
+.+|+.|+| |||.|+..|+.++++.|+++|++++.. .+..|.||||+|+..|+.++++.|+++| ++++.+ +..|
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~G-ADVN~~~~~~g 104 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYG-ADVNRYAEEAK 104 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcCcccCCCC
Confidence 467888776 566667779999999999999999763 2568999999999999999999999998 466654 5679
Q ss_pred cchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhc
Q 013331 94 ETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDA 173 (445)
Q Consensus 94 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a 173 (445)
.||||.|+..|+.+++++|+.. ++.++.+|.+|.||||+|+..++..++..+.. .. .+..+.+|..+.
T Consensus 105 ~TpLh~Aa~~~~~eivklLL~~---GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~---- 172 (300)
T PHA02884 105 ITPLYISVLHGCLKCLEILLSY---GADINIQTNDMVTPIELALMICNNFLAFMICD--NE---ISNFYKHPKKIL---- 172 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHhCChhHHHHhcC--Cc---ccccccChhhhh----
Confidence 9999999999999999999988 78899999999999999999888888755543 22 466777888763
Q ss_pred cccchhcHHHHHHHhcCc
Q 013331 174 SNSGALQIVPALEEAGAR 191 (445)
Q Consensus 174 ~~~~~~~i~~~L~~~ga~ 191 (445)
.+.+++++|+.++..
T Consensus 173 ---~n~ei~~~Lish~vl 187 (300)
T PHA02884 173 ---INFDILKILVSHFIL 187 (300)
T ss_pred ---ccHHHHHHHHHHHHH
Confidence 246788999888763
No 51
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.82 E-value=5.5e-20 Score=178.64 Aligned_cols=164 Identities=30% Similarity=0.414 Sum_probs=135.4
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|.++=++.|+..+...+ ..+.+|.|+||-||...+.+||++|+++|++++. .|.+||||||.|+..|+..++++++++
T Consensus 51 ~d~~ev~~ll~~ga~~~-~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~-~d~e~wtPlhaaascg~~~i~~~li~~ 128 (527)
T KOG0505|consen 51 GDLEEVRKLLNRGASPN-LCNVDGLTALHQACIDDNLEMVKFLVENGANVNA-QDNEGWTPLHAAASCGYLNIVEYLIQH 128 (527)
T ss_pred ccHHHHHHHhccCCCcc-ccCCccchhHHHHHhcccHHHHHHHHHhcCCccc-cccccCCcchhhcccccHHHHHHHHHh
Confidence 35677888998886664 7889999999999999999999999999999988 899999999999999999999999997
Q ss_pred CCCcccc----------------------------------------------------------ccccCcchHhHHHHc
Q 013331 82 NLQSAEM----------------------------------------------------------RTIHGETVLHLTVKN 103 (445)
Q Consensus 82 ~~~~~~~----------------------------------------------------------~~~~g~t~Lh~A~~~ 103 (445)
+...... ++..|.|.||+|+.+
T Consensus 129 gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~ 208 (527)
T KOG0505|consen 129 GANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAAN 208 (527)
T ss_pred hhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhh
Confidence 7432211 123477888888888
Q ss_pred CCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHh
Q 013331 104 NQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVE 170 (445)
Q Consensus 104 g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~ 170 (445)
|..++.++|++. +..++.+|.+|+||||.|+..+..+++++|+++|++++..+..|.||++++.
T Consensus 209 Gy~e~~~lLl~a---g~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~d 272 (527)
T KOG0505|consen 209 GYTEVAALLLQA---GYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVAD 272 (527)
T ss_pred hHHHHHHHHHHh---ccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchh
Confidence 888888888877 6667778888888888888888888888777888888888888888888754
No 52
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.81 E-value=2.2e-20 Score=199.39 Aligned_cols=186 Identities=31% Similarity=0.391 Sum_probs=152.5
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcC-CHHHHHHHHh
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG-RINIIDEILS 80 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G-~~~iv~~Ll~ 80 (445)
+..+.++.++..+...+ ..++.|.||||.|+..++.++|+.+++++++.+. .+..|+||+|+|+..| ..+++..+++
T Consensus 385 g~~~~v~Lll~~ga~~~-~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~-~~~lG~T~lhvaa~~g~~~~~~~~l~~ 462 (1143)
T KOG4177|consen 385 GRVSVVELLLEAGADPN-SAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNA-KAKLGYTPLHVAAKKGRYLQIARLLLQ 462 (1143)
T ss_pred CchhHHHhhhhccCCcc-cCCCCCcceeeehhhccCcceEEEEeccCCChhh-HhhcCCChhhhhhhcccHhhhhhhHhh
Confidence 34677788888877744 7778888888888888888888888888888766 7888888888888888 6677767777
Q ss_pred cCCCccccccccCcchHhHHHHcCCHHHHHHHHHhc------------------------------CcccccCCCCCCCC
Q 013331 81 LNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETL------------------------------NITKLANMPDNDGN 130 (445)
Q Consensus 81 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~------------------------------~~~~~~n~~d~~g~ 130 (445)
.+ ...+.....|.||||+|+..|+.+++..|++.. ..+..++.++.+|+
T Consensus 463 ~g-~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~ 541 (1143)
T KOG4177|consen 463 YG-ADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGY 541 (1143)
T ss_pred cC-CCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhccccc
Confidence 66 667777778888888888888888888777632 12456678889999
Q ss_pred cHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013331 131 TILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 131 T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
||||.|+..|+.++|++|+++|++++.+++.|+||||. +...++.+|+.+|.++|+.+..
T Consensus 542 TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~----Aa~~G~~~i~~LLlk~GA~vna 601 (1143)
T KOG4177|consen 542 TPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQ----AAQQGHNDIAELLLKHGASVNA 601 (1143)
T ss_pred chHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhH----HHHcChHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999999999999999999 5556688999999999998764
No 53
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.80 E-value=2.8e-19 Score=193.25 Aligned_cols=180 Identities=22% Similarity=0.192 Sum_probs=138.4
Q ss_pred CHHHHHHHHHHh--chhhhcCCCCCCChHHH-HHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHH----H
Q 013331 2 HVADIVKELLEA--RQEFAWKKDLNGHTPLH-LSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRIN----I 74 (445)
Q Consensus 2 ~~~d~v~~Ll~~--~~~~~~~~d~~G~TpLH-~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~----i 74 (445)
|..+.++.+++. +.++ +..|..|+|||| .|+..++.++++.|++.+. .+..|.||||.|+. |+.+ +
T Consensus 28 g~~~~v~~lL~~~~~~~i-n~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A~~-~~~~~v~~l 100 (743)
T TIGR00870 28 GDLASVYRDLEEPKKLNI-NCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAISL-EYVDAVEAI 100 (743)
T ss_pred CCHHHHHHHhccccccCC-CCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHHHh-ccHHHHHHH
Confidence 567889999988 3344 367889999999 8999999999999999886 57789999999987 3333 3
Q ss_pred HHHHHhcCCCc---------cccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCC--------------CCCCc
Q 013331 75 IDEILSLNLQS---------AEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPD--------------NDGNT 131 (445)
Q Consensus 75 v~~Ll~~~~~~---------~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d--------------~~g~T 131 (445)
++.+.+..+.. ....+..|.||||+|+.+|+.+++++|+++ ++++|.++ ..|.|
T Consensus 101 l~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~---GAdv~~~~~~~~~~~~~~~~~~~~g~t 177 (743)
T TIGR00870 101 LLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLER---GASVPARACGDFFVKSQGVDSFYHGES 177 (743)
T ss_pred HHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhC---CCCCCcCcCCchhhcCCCCCccccccc
Confidence 34444433221 111234699999999999999999999997 55565442 35899
Q ss_pred HHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhcccc-----chhcHHHHHHHhcCc
Q 013331 132 ILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNS-----GALQIVPALEEAGAR 191 (445)
Q Consensus 132 ~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~-----~~~~i~~~L~~~ga~ 191 (445)
|||.|+..++.+++++|++.|++++..|..|+||+|++....... ....+.+++++.++.
T Consensus 178 pL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~ 242 (743)
T TIGR00870 178 PLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDK 242 (743)
T ss_pred HHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999976543211 123466667666554
No 54
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.80 E-value=1.2e-17 Score=180.58 Aligned_cols=177 Identities=23% Similarity=0.210 Sum_probs=136.1
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcC---CHHHHHHHhhcCCCC------C---CCCCCCCccHHHHHHHc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKG---HLEITRELLKLDPDL------S---SLPDNEGRTPLHWAAIK 69 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g---~~~iv~~LL~~~~~~------~---~~~d~~G~TpLh~Aa~~ 69 (445)
++.|+++.|++.+. .+..|.||||.|+..+ ..++++.+++.+++. + ...+..|.||||+||.+
T Consensus 64 ~~~eiv~lLl~~g~-----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~ 138 (743)
T TIGR00870 64 ENLELTELLLNLSC-----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHR 138 (743)
T ss_pred ChHHHHHHHHhCCC-----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHh
Confidence 46788888888775 5778999999999722 233444444444321 1 11235799999999999
Q ss_pred CCHHHHHHHHhcCCCccccc--------------cccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHH
Q 013331 70 GRINIIDEILSLNLQSAEMR--------------TIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHL 135 (445)
Q Consensus 70 G~~~iv~~Ll~~~~~~~~~~--------------~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHl 135 (445)
|+.++++.|+++|.+ ++.+ ...|+||||.|+..|+.+++++|+++ ++++|.+|..|+||||+
T Consensus 139 ~~~eiVklLL~~GAd-v~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~---gadin~~d~~g~T~Lh~ 214 (743)
T TIGR00870 139 QNYEIVKLLLERGAS-VPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED---PADILTADSLGNTLLHL 214 (743)
T ss_pred CCHHHHHHHHhCCCC-CCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC---CcchhhHhhhhhHHHHH
Confidence 999999999999843 3322 13599999999999999999999987 67899999999999999
Q ss_pred HHhCC---------cHHHHHHHHhcCCCc-------cccccCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013331 136 ATAGK---------LTTMVIYLLKLGVDV-------NAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 136 A~~~~---------~~~iv~~Ll~~g~~~-------~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
|+..+ ...+.+++++.+++. +..|++|.||+++ |...++.++.+.|++.+.+
T Consensus 215 A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~----A~~~g~~~l~~lLL~~~~~ 282 (743)
T TIGR00870 215 LVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKL----AAKEGRIVLFRLKLAIKYK 282 (743)
T ss_pred HHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhh----hhhcCCccHHHHHHHHHHh
Confidence 99886 234566666555543 6789999999999 6677888899999886543
No 55
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.80 E-value=5.2e-19 Score=155.38 Aligned_cols=139 Identities=22% Similarity=0.266 Sum_probs=117.1
Q ss_pred cCCCCCCCCCCCCccHHHHHHHcCCH----HHHHHHHhcCCCccccccccCcchHhHHHHcCCHHH---HHHHHHhcCcc
Q 013331 47 LDPDLSSLPDNEGRTPLHWAAIKGRI----NIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEA---VKYLMETLNIT 119 (445)
Q Consensus 47 ~~~~~~~~~d~~G~TpLh~Aa~~G~~----~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~---v~~Ll~~~~~~ 119 (445)
++.++.. .+.++.++||.||..|+. +++++|.+.+ ...+.+|.+|+||||+|+.+|+.+. +++|++. +
T Consensus 9 ~~~~~~~-~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g-~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~---G 83 (166)
T PHA02743 9 NNLGAVE-IDEDEQNTFLRICRTGNIYELMEVAPFISGDG-HLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNM---G 83 (166)
T ss_pred cchHHhh-hccCCCcHHHHHHHcCCHHHHHHHHHHHhhcc-hhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHc---C
Confidence 3455544 567888999999999998 4555666665 4567788899999999999988654 7899887 7
Q ss_pred cccCCCC-CCCCcHHHHHHhCCcHHHHHHHH-hcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013331 120 KLANMPD-NDGNTILHLATAGKLTTMVIYLL-KLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 120 ~~~n~~d-~~g~T~LHlA~~~~~~~iv~~Ll-~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
..+|.+| ..|+||||+|+..++.+++++|+ +.|++++.+|..|.||||+ +...++.+++++|+++|++...
T Consensus 84 adin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~----A~~~~~~~iv~~Ll~~ga~~~~ 156 (166)
T PHA02743 84 ADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHI----AYKMRDRRMMEILRANGAVCDD 156 (166)
T ss_pred CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHH----HHHcCCHHHHHHHHHcCCCCCC
Confidence 8899998 58999999999999999999999 5899999999999999999 4555677899999999987654
No 56
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.79 E-value=2.1e-19 Score=155.75 Aligned_cols=145 Identities=22% Similarity=0.247 Sum_probs=132.6
Q ss_pred hhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcch
Q 013331 17 FAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETV 96 (445)
Q Consensus 17 ~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~ 96 (445)
..+..|+.|.|||.+|++.||+++|+.||+.|+++.. ..+...|+|.+|+..|..+||+.|+.++ .+++.-|.+|.||
T Consensus 152 ~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~-lgk~resALsLAt~ggytdiV~lLL~r~-vdVNvyDwNGgTp 229 (296)
T KOG0502|consen 152 KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDA-LGKYRESALSLATRGGYTDIVELLLTRE-VDVNVYDWNGGTP 229 (296)
T ss_pred cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhh-hhhhhhhhHhHHhcCChHHHHHHHHhcC-CCcceeccCCCce
Confidence 4458899999999999999999999999999999866 6777889999999999999999999998 4678889999999
Q ss_pred HhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHH
Q 013331 97 LHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALD 167 (445)
Q Consensus 97 Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~ 167 (445)
|.+|++.|+.++++.|++. +++++..|..|++++.+|+..|+. +++..++..+.++.+|+.-.||+|
T Consensus 230 LlyAvrgnhvkcve~Ll~s---GAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 230 LLYAVRGNHVKCVESLLNS---GADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTPLH 296 (296)
T ss_pred eeeeecCChHHHHHHHHhc---CCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCCCC
Confidence 9999999999999999988 889999999999999999999987 888888888888888887777753
No 57
>PHA02792 ankyrin-like protein; Provisional
Probab=99.79 E-value=3.2e-18 Score=174.63 Aligned_cols=184 Identities=17% Similarity=0.164 Sum_probs=150.0
Q ss_pred CHHHHHHHHHHhchhhh-----------------------------------cCCCCCCChHHHHHHHcC-------CHH
Q 013331 2 HVADIVKELLEARQEFA-----------------------------------WKKDLNGHTPLHLSCSKG-------HLE 39 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~-----------------------------------~~~d~~G~TpLH~Aa~~g-------~~~ 39 (445)
|+.|+++.|++.+.+.. +..|..|.||||+|+..+ +.|
T Consensus 117 ~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~ 196 (631)
T PHA02792 117 PNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLD 196 (631)
T ss_pred CChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHH
Confidence 68899999999986411 145667999999999999 899
Q ss_pred HHHHHhhcCCCCCCCCCCCCccHHHHHHHcC--CHHHHHHHHhcCCCccccc----------------------------
Q 013331 40 ITRELLKLDPDLSSLPDNEGRTPLHWAAIKG--RINIIDEILSLNLQSAEMR---------------------------- 89 (445)
Q Consensus 40 iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G--~~~iv~~Ll~~~~~~~~~~---------------------------- 89 (445)
+++.|+++|++++. .|..|.||||+|+.+. +.|+++.|++..-.-.+.+
T Consensus 197 v~k~Li~~g~~~~~-~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~ 275 (631)
T PHA02792 197 VINYLISHEKEMRY-YTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLS 275 (631)
T ss_pred HHHHHHhCCCCcCc-cCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHh
Confidence 99999999999988 8999999999999999 7788888876321000000
Q ss_pred ------------------------------------------------------------cccCcchHhHHHHcCCHHHH
Q 013331 90 ------------------------------------------------------------TIHGETVLHLTVKNNQYEAV 109 (445)
Q Consensus 90 ------------------------------------------------------------~~~g~t~Lh~A~~~g~~~~v 109 (445)
...+.+++|.|+..|+.+++
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIV 355 (631)
T PHA02792 276 GHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVV 355 (631)
T ss_pred CCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHH
Confidence 01244567889999999999
Q ss_pred HHHHHhcCcccccCCCCCCC--CcHHHHHHhCCcH---HHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHH
Q 013331 110 KYLMETLNITKLANMPDNDG--NTILHLATAGKLT---TMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPA 184 (445)
Q Consensus 110 ~~Ll~~~~~~~~~n~~d~~g--~T~LHlA~~~~~~---~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~ 184 (445)
++|+++ |+++|.+|.+| .||||.|...... +++++|+++|+++|.+|..|+||||+ |...++.+++++
T Consensus 356 elLIs~---GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~----Aa~~~n~eivel 428 (631)
T PHA02792 356 EYILKN---GNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYY----CIESHSVSLVEW 428 (631)
T ss_pred HHHHHc---CCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHH----HHHcCCHHHHHH
Confidence 999998 78889888875 6999998776654 46788899999999999999999999 556678889999
Q ss_pred HHHhcCccc
Q 013331 185 LEEAGARRC 193 (445)
Q Consensus 185 L~~~ga~~~ 193 (445)
|+++|++..
T Consensus 429 LLs~GADIN 437 (631)
T PHA02792 429 LIDNGADIN 437 (631)
T ss_pred HHHCCCCCC
Confidence 999998754
No 58
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.78 E-value=6.6e-19 Score=152.97 Aligned_cols=129 Identities=26% Similarity=0.296 Sum_probs=107.2
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHhcC------CCccccccccCcchHhHHHHcCCHH---HHHHHHHhcCcccccCCC
Q 013331 55 PDNEGRTPLHWAAIKGRINIIDEILSLN------LQSAEMRTIHGETVLHLTVKNNQYE---AVKYLMETLNITKLANMP 125 (445)
Q Consensus 55 ~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~------~~~~~~~~~~g~t~Lh~A~~~g~~~---~v~~Ll~~~~~~~~~n~~ 125 (445)
+|.+|.||||+|+..|+.. +.+...+ +.....+|.+|+||||+|+..|+.+ ++++|++. +.++|.+
T Consensus 13 ~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~---gadin~~ 87 (154)
T PHA02736 13 PDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEW---GADINGK 87 (154)
T ss_pred cCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHc---CCCcccc
Confidence 6888999999999999842 2222211 1234456889999999999999874 67888887 7789999
Q ss_pred C-CCCCcHHHHHHhCCcHHHHHHHHh-cCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcc
Q 013331 126 D-NDGNTILHLATAGKLTTMVIYLLK-LGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 126 d-~~g~T~LHlA~~~~~~~iv~~Ll~-~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
| .+|+||||+|+..++.+++++|+. .|++++.+|..|.||+++ +...++.+++++|++.|++.
T Consensus 88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~----A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYV----ACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHH----HHHcCCHHHHHHHHHcCCCC
Confidence 8 599999999999999999999996 699999999999999999 45567788999999999764
No 59
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.77 E-value=1.7e-18 Score=144.79 Aligned_cols=135 Identities=25% Similarity=0.322 Sum_probs=117.0
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..+.|+.||+.+++..+.+|.+|.||||.|+++||.+||+.|+..|++... +...||||||.||.-.+.+++..|+++
T Consensus 74 nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a-~T~~GWTPLhSAckWnN~~va~~LLqh 152 (228)
T KOG0512|consen 74 NRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEA-KTNEGWTPLHSACKWNNFEVAGRLLQH 152 (228)
T ss_pred ccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccc-ccccCccchhhhhcccchhHHHHHHhc
Confidence 4567899999999999999999999999999999999999999999999987 888999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCC-HHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCC
Q 013331 82 NLQSAEMRTIHGETVLHLTVKNNQ-YEAVKYLMETLNITKLANMPDNDGNTILHLATAGK 140 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~-~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~ 140 (445)
+ .+++.......||||+|+...+ ...+.+|+... ....-.++..+.||+.+|-+.+
T Consensus 153 g-aDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dr--yi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 153 G-ADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDR--YIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred c-CcccccccccchhhHHhhcccchHHHHHHHhhcc--ccChhhhcCccchHHHHHHHhh
Confidence 9 6777788888999999998765 56677776642 3334456778999999997654
No 60
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.77 E-value=4.3e-19 Score=159.57 Aligned_cols=133 Identities=29% Similarity=0.425 Sum_probs=113.4
Q ss_pred HHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHH
Q 013331 33 CSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYL 112 (445)
Q Consensus 33 a~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~L 112 (445)
|+.|+.--|+.-|+.-...+++-|..|.+|||+||+.|+..+++.|+.++ .-.+..|....||||+|+.+|+.++|+.|
T Consensus 8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rg-arvn~tnmgddtplhlaaahghrdivqkl 86 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRG-ARVNSTNMGDDTPLHLAAAHGHRDIVQKL 86 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcc-cccccccCCCCcchhhhhhcccHHHHHHH
Confidence 34444434444444433334457889999999999999999999999998 56777787888999999999999999999
Q ss_pred HHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHH
Q 013331 113 METLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVV 169 (445)
Q Consensus 113 l~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a 169 (445)
++. .+++|..++.|+||||+|+..|+-++++-|+..|+.+++.|++|.||++.+
T Consensus 87 l~~---kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 87 LSR---KADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred HHH---hcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence 987 788999999999999999999999999999999999999999999999983
No 61
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.77 E-value=7.5e-17 Score=164.14 Aligned_cols=161 Identities=28% Similarity=0.403 Sum_probs=136.9
Q ss_pred CCCCCCChHHHHHHH---cCCHHHHHHHhhcCCCCCC----CCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccc---
Q 013331 20 KKDLNGHTPLHLSCS---KGHLEITRELLKLDPDLSS----LPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMR--- 89 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~---~g~~~iv~~LL~~~~~~~~----~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~--- 89 (445)
++...|+|.||.|.- .++-++++.||+.-|.+.+ -....|.||||+|+.+.+.++|+.|++.+++ ++.+
T Consensus 138 ~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gAD-V~aRa~G 216 (782)
T KOG3676|consen 138 ERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGAD-VHARACG 216 (782)
T ss_pred cccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCc-hhhHhhc
Confidence 456689999999996 4567999999998765432 1245799999999999999999999998854 2211
Q ss_pred ------c--------------ccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHH
Q 013331 90 ------T--------------IHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL 149 (445)
Q Consensus 90 ------~--------------~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll 149 (445)
| ..|+.||-+||.-++.|++++|+++ ++++|.+|.+|||.||..+.+...++..+++
T Consensus 217 ~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~---gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L 293 (782)
T KOG3676|consen 217 AFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH---GADPNAQDSNGNTVLHMLVIHFVTEMYDLAL 293 (782)
T ss_pred cccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc---CCCCCccccCCChHHHHHHHHHHHHHHHHHH
Confidence 1 1389999999999999999999997 8999999999999999999999999999999
Q ss_pred hcCCC--ccccccCCCCHHHHHhhhccccchhcHHHHHHHh
Q 013331 150 KLGVD--VNAINRKGYTALDVVESDASNSGALQIVPALEEA 188 (445)
Q Consensus 150 ~~g~~--~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ 188 (445)
++|++ ...+|+.|.|||.+ |...+..++.+.+++.
T Consensus 294 ~~ga~~l~~v~N~qgLTPLtL----AaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 294 ELGANALEHVRNNQGLTPLTL----AAKLGKKEMFQHILER 330 (782)
T ss_pred hcCCCccccccccCCCChHHH----HHHhhhHHHHHHHHHh
Confidence 99999 99999999999999 4555667788888776
No 62
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.76 E-value=6.6e-19 Score=171.21 Aligned_cols=133 Identities=28% Similarity=0.342 Sum_probs=119.3
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCC-----------------------------
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSS----------------------------- 53 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~----------------------------- 53 (445)
+.+||+++++.+.+++ ..|..||||||.|+.+||..++++|+.+|+++..
T Consensus 85 ~~e~v~~l~e~ga~Vn-~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~g 163 (527)
T KOG0505|consen 85 NLEMVKFLVENGANVN-AQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQG 163 (527)
T ss_pred cHHHHHHHHHhcCCcc-ccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhc
Confidence 5789999999999988 8899999999999999999999999998754321
Q ss_pred -----------------------------CCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcC
Q 013331 54 -----------------------------LPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNN 104 (445)
Q Consensus 54 -----------------------------~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g 104 (445)
+.+..|-|.||+|+.+|..++.+.|++.+ .....+|.+|+||||.|+.-|
T Consensus 164 i~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag-~~~~~~D~dgWtPlHAAA~Wg 242 (527)
T KOG0505|consen 164 IDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAG-YSVNIKDYDGWTPLHAAAHWG 242 (527)
T ss_pred ccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhc-cCcccccccCCCcccHHHHhh
Confidence 12445999999999999999999999998 788999999999999999999
Q ss_pred CHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCC
Q 013331 105 QYEAVKYLMETLNITKLANMPDNDGNTILHLATAGK 140 (445)
Q Consensus 105 ~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~ 140 (445)
+.+++++|+++ +++++.....|.||+-+|....
T Consensus 243 ~~~~~elL~~~---ga~~d~~t~~g~~p~dv~dee~ 275 (527)
T KOG0505|consen 243 QEDACELLVEH---GADMDAKTKMGETPLDVADEEE 275 (527)
T ss_pred hHhHHHHHHHh---hcccchhhhcCCCCccchhhhh
Confidence 99999999998 7888999999999999997543
No 63
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.75 E-value=2.9e-18 Score=172.23 Aligned_cols=181 Identities=30% Similarity=0.341 Sum_probs=112.7
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++..+-+. ..|..|.+|||+|+..|+.|+++.||.++..++. .+..|.||||.||..|+.+++.+|+.+
T Consensus 60 g~~~is~llle~ea~ld-l~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na-~~~e~~tplhlaaqhgh~dvv~~Ll~~ 137 (854)
T KOG0507|consen 60 GQNQISKLLLDYEALLD-LCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNA-VNIENETPLHLAAQHGHLEVVFYLLKK 137 (854)
T ss_pred CchHHHHHHhcchhhhh-hhhccCcceEEehhhcCcchHHHHHHhcccCCCc-ccccCcCccchhhhhcchHHHHHHHhc
Confidence 45566666666655443 4456677777777777777777777777744433 666777777777777777777777777
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCccc------ccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCc
Q 013331 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITK------LANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDV 155 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~------~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~ 155 (445)
+ .+..++|+.++|+|-+|++.|+.++++.|++. +... --..++-.+-+|||+|+++|+.++++.|++.|.++
T Consensus 138 ~-adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~-~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~di 215 (854)
T KOG0507|consen 138 N-ADPFIRNNSKETVLDLASRFGRAEVVQMLLQK-KFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDI 215 (854)
T ss_pred C-CCccccCcccccHHHHHHHhhhhHHHHHHhhh-ccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCc
Confidence 6 45566677777777777777777777776654 1100 01233445566777777777777777777776666
Q ss_pred cccccCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013331 156 NAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 156 ~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
|...++| |+||. +..-+..+++++|++.|..
T Consensus 216 n~~t~~g-talhe----aalcgk~evvr~ll~~gin 246 (854)
T KOG0507|consen 216 NYTTEDG-TALHE----AALCGKAEVVRFLLEIGIN 246 (854)
T ss_pred ccccccc-hhhhh----HhhcCcchhhhHHHhhccc
Confidence 6555444 55555 3333444455555555543
No 64
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.75 E-value=8.7e-18 Score=159.38 Aligned_cols=141 Identities=14% Similarity=0.157 Sum_probs=120.6
Q ss_pred CCHHHHHHHHHHhchhhhcC---CCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHH
Q 013331 1 MHVADIVKELLEARQEFAWK---KDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDE 77 (445)
Q Consensus 1 ~~~~d~v~~Ll~~~~~~~~~---~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~ 77 (445)
+|..|+++.|++.+.+++.. .|..|.||||+|+..|+.++++.|+++|++++...+..|.||||+|+..|+.++++.
T Consensus 43 ~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivkl 122 (300)
T PHA02884 43 FHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEI 122 (300)
T ss_pred cCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHH
Confidence 36789999999999988743 256899999999999999999999999999986345689999999999999999999
Q ss_pred HHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCC
Q 013331 78 ILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGV 153 (445)
Q Consensus 78 Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~ 153 (445)
|++.+ ..++.+|..|.||||+|+..++.+++..+.. +..+..+.+|++.+ ++.+++++|+.+++
T Consensus 123 LL~~G-Adin~kd~~G~TpL~~A~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~---~n~ei~~~Lish~v 186 (300)
T PHA02884 123 LLSYG-ADINIQTNDMVTPIELALMICNNFLAFMICD--------NEISNFYKHPKKIL---INFDILKILVSHFI 186 (300)
T ss_pred HHHCC-CCCCCCCCCCCCHHHHHHHhCChhHHHHhcC--------CcccccccChhhhh---ccHHHHHHHHHHHH
Confidence 99998 6778889999999999999999888765532 22467788899875 46899999988776
No 65
>PHA02792 ankyrin-like protein; Provisional
Probab=99.74 E-value=4.8e-17 Score=166.10 Aligned_cols=182 Identities=16% Similarity=0.129 Sum_probs=146.3
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcC--CHHHHHHHhhcC--------------------------------
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSKG--HLEITRELLKLD-------------------------------- 48 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g--~~~iv~~LL~~~-------------------------------- 48 (445)
..|+++.|++++.+++ ..|..|.||||+|+.+. +.|+++.|++..
T Consensus 194 ~~~v~k~Li~~g~~~~-~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ 272 (631)
T PHA02792 194 SLDVINYLISHEKEMR-YYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDK 272 (631)
T ss_pred CHHHHHHHHhCCCCcC-ccCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHH
Confidence 3799999999999987 67888999999999998 677777776421
Q ss_pred -----------------------------------------------------------CCCCCCCCCCCccHHHHHHHc
Q 013331 49 -----------------------------------------------------------PDLSSLPDNEGRTPLHWAAIK 69 (445)
Q Consensus 49 -----------------------------------------------------------~~~~~~~d~~G~TpLh~Aa~~ 69 (445)
++.. ...+..++|.||..
T Consensus 273 ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~ 349 (631)
T PHA02792 273 LLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDN 349 (631)
T ss_pred HHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHc
Confidence 1110 11356678999999
Q ss_pred CCHHHHHHHHhcCCCccccccccC--cchHhHHHHcCCHH---HHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHH
Q 013331 70 GRINIIDEILSLNLQSAEMRTIHG--ETVLHLTVKNNQYE---AVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTM 144 (445)
Q Consensus 70 G~~~iv~~Ll~~~~~~~~~~~~~g--~t~Lh~A~~~g~~~---~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~i 144 (445)
|+.++++.|+++| ..++.+|.+| .||||.|+.++..+ ++++|+++ ++++|.+|..|.||||.|+..++.++
T Consensus 350 gn~eIVelLIs~G-ADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~---GADIN~kD~~G~TPLh~Aa~~~n~ei 425 (631)
T PHA02792 350 RDPKVVEYILKNG-NVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPY---IDDINKIDKHGRSILYYCIESHSVSL 425 (631)
T ss_pred CCHHHHHHHHHcC-CchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhc---CCccccccccCcchHHHHHHcCCHHH
Confidence 9999999999998 5567777664 69999988776654 56777777 77899999999999999999999999
Q ss_pred HHHHHhcCCCccccccCCCCHHHHHhhhccc------cchhcHHHHHHHhcCcc
Q 013331 145 VIYLLKLGVDVNAINRKGYTALDVVESDASN------SGALQIVPALEEAGARR 192 (445)
Q Consensus 145 v~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~------~~~~~i~~~L~~~ga~~ 192 (445)
+++|+++|++++.+|..|.||+++|...+.. ....++++.|++.|+..
T Consensus 426 velLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 426 VEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred HHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 9999999999999999999999997653221 22345788888888654
No 66
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.71 E-value=2e-16 Score=130.96 Aligned_cols=125 Identities=40% Similarity=0.624 Sum_probs=111.1
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhH
Q 013331 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 99 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~ 99 (445)
..|.+|+||||+|+..|+.++++.|++.+++... .+..|.||||.|+..++.++++.|++.++ ..+..+..|.||+|.
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~-~~~~g~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~~l~~ 79 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNA-KDNDGRTPLHLAAKNGHLEIVKLLLEKGA-DVNARDKDGNTPLHL 79 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCHHHH
Confidence 3567899999999999999999999999988754 78899999999999999999999999884 556677889999999
Q ss_pred HHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHH
Q 013331 100 TVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL 149 (445)
Q Consensus 100 A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll 149 (445)
|+..++.+++++|+++ +...+..|..|.||+|.|...++.+++++|+
T Consensus 80 a~~~~~~~~~~~L~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 80 AARNGNLDVVKLLLKH---GADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHcCcHHHHHHHHHc---CCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 9999999999999987 4567778899999999999999999988874
No 67
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.71 E-value=7.1e-16 Score=157.13 Aligned_cols=148 Identities=25% Similarity=0.322 Sum_probs=130.1
Q ss_pred CHHHHHHHHHHhchhhhcC----CCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCC-------C-CC------------
Q 013331 2 HVADIVKELLEARQEFAWK----KDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSL-------P-DN------------ 57 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~----~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~-------~-d~------------ 57 (445)
++.|+++.|++..|++.+. ....|.||||+|+.+.+.++|+.||+.|+|++.. + |.
T Consensus 157 ~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~ 236 (782)
T KOG3676|consen 157 GHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGY 236 (782)
T ss_pred hHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcce
Confidence 4679999999999997753 3456999999999999999999999999998642 1 11
Q ss_pred --CCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHH
Q 013331 58 --EGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHL 135 (445)
Q Consensus 58 --~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHl 135 (445)
-|..||-+||..++.|++++|++++ ++++.+|.+|+|+||..+.+-..+|..++++.... .+...++.+|-|||.+
T Consensus 237 ~YfGEyPLSfAAC~nq~eivrlLl~~g-Ad~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~-~l~~v~N~qgLTPLtL 314 (782)
T KOG3676|consen 237 FYFGEYPLSFAACTNQPEIVRLLLAHG-ADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN-ALEHVRNNQGLTPLTL 314 (782)
T ss_pred eeeccCchHHHHHcCCHHHHHHHHhcC-CCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC-ccccccccCCCChHHH
Confidence 2678999999999999999999977 78999999999999999999999999999998543 4477889999999999
Q ss_pred HHhCCcHHHHHHHHhc
Q 013331 136 ATAGKLTTMVIYLLKL 151 (445)
Q Consensus 136 A~~~~~~~iv~~Ll~~ 151 (445)
|++.|..++.+.++++
T Consensus 315 AaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 315 AAKLGKKEMFQHILER 330 (782)
T ss_pred HHHhhhHHHHHHHHHh
Confidence 9999999999999976
No 68
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.69 E-value=4.6e-17 Score=163.70 Aligned_cols=167 Identities=28% Similarity=0.335 Sum_probs=147.4
Q ss_pred cCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHh
Q 013331 19 WKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLH 98 (445)
Q Consensus 19 ~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh 98 (445)
+..|.+|.|+||.||.+|+.++++.|++..+-+.- .|.+|.+|||+||..|+.++++.++... +..+..+..|+||||
T Consensus 43 n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl-~d~kg~~plhlaaw~g~~e~vkmll~q~-d~~na~~~e~~tplh 120 (854)
T KOG0507|consen 43 NLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDL-CDTKGILPLHLAAWNGNLEIVKMLLLQT-DILNAVNIENETPLH 120 (854)
T ss_pred cccCccchhHHHHHHhcCchHHHHHHhcchhhhhh-hhccCcceEEehhhcCcchHHHHHHhcc-cCCCcccccCcCccc
Confidence 46788999999999999999999999998877644 7899999999999999999999999988 778888999999999
Q ss_pred HHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCc--------cccccCCCCHHHHHh
Q 013331 99 LTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDV--------NAINRKGYTALDVVE 170 (445)
Q Consensus 99 ~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~--------~~~n~~G~Tpl~~a~ 170 (445)
.||.+|+.+++.+|+.+ +.+.-.+|+.+.|+|-+|++.|..++++.|+....+. ...+-.+-+|+|+
T Consensus 121 laaqhgh~dvv~~Ll~~---~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHl-- 195 (854)
T KOG0507|consen 121 LAAQHGHLEVVFYLLKK---NADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHL-- 195 (854)
T ss_pred hhhhhcchHHHHHHHhc---CCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcch--
Confidence 99999999999999998 6667788999999999999999999999998653222 2344567889999
Q ss_pred hhccccchhcHHHHHHHhcCcccC
Q 013331 171 SDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 171 ~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
+..+++.++++.|+++|.+...
T Consensus 196 --aakngh~~~~~~ll~ag~din~ 217 (854)
T KOG0507|consen 196 --AAKNGHVECMQALLEAGFDINY 217 (854)
T ss_pred --hhhcchHHHHHHHHhcCCCccc
Confidence 7888999999999999987654
No 69
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.68 E-value=1.2e-16 Score=143.94 Aligned_cols=116 Identities=28% Similarity=0.350 Sum_probs=107.0
Q ss_pred hhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcch
Q 013331 17 FAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETV 96 (445)
Q Consensus 17 ~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~ 96 (445)
.++.-|+.|.+|||+||+.||..+|+.||.+|+.++. .|....||||+||..||.++|..|++.. .+.+..|..|.||
T Consensus 26 dln~gddhgfsplhwaakegh~aivemll~rgarvn~-tnmgddtplhlaaahghrdivqkll~~k-advnavnehgntp 103 (448)
T KOG0195|consen 26 DLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNS-TNMGDDTPLHLAAAHGHRDIVQKLLSRK-ADVNAVNEHGNTP 103 (448)
T ss_pred ccccccccCcchhhhhhhcccHHHHHHHHhccccccc-ccCCCCcchhhhhhcccHHHHHHHHHHh-cccchhhccCCCc
Confidence 3447788999999999999999999999999999987 6777889999999999999999999987 6788999999999
Q ss_pred HhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHH
Q 013331 97 LHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLAT 137 (445)
Q Consensus 97 Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~ 137 (445)
||+||.-|...+.+-|+.. ++.++..+++|.|||..|-
T Consensus 104 lhyacfwgydqiaedli~~---ga~v~icnk~g~tpldkak 141 (448)
T KOG0195|consen 104 LHYACFWGYDQIAEDLISC---GAAVNICNKKGMTPLDKAK 141 (448)
T ss_pred hhhhhhhcHHHHHHHHHhc---cceeeecccCCCCchhhhc
Confidence 9999999999999999887 8889999999999998874
No 70
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.66 E-value=6.3e-16 Score=121.07 Aligned_cols=89 Identities=37% Similarity=0.505 Sum_probs=44.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcH
Q 013331 63 LHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLT 142 (445)
Q Consensus 63 Lh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~ 142 (445)
||+|+..|+.++++.|++.+. ..+. |+||||+|+.+|+.+++++|++. +..++.+|.+|+||||+|+..++.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~-~~~~----~~~~l~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~ 72 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGA-DINL----GNTALHYAAENGNLEIVKLLLEN---GADINSQDKNGNTALHYAAENGNL 72 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTS-TTTS----SSBHHHHHHHTTTHHHHHHHHHT---TTCTT-BSTTSSBHHHHHHHTTHH
T ss_pred CHHHHHcCCHHHHHHHHHCcC-CCCC----CCCHHHHHHHcCCHHHHHHHHHh---cccccccCCCCCCHHHHHHHcCCH
Confidence 445555555555555555432 1111 44555555555555555555554 444555555566666666666666
Q ss_pred HHHHHHHhcCCCccccc
Q 013331 143 TMVIYLLKLGVDVNAIN 159 (445)
Q Consensus 143 ~iv~~Ll~~g~~~~~~n 159 (445)
+++++|+++|++++.+|
T Consensus 73 ~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 73 EIVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHHHTTT-TTSS-
T ss_pred HHHHHHHHcCCCCCCcC
Confidence 66666665565555443
No 71
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.66 E-value=4.3e-16 Score=144.68 Aligned_cols=143 Identities=22% Similarity=0.341 Sum_probs=128.0
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHc-----CCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHH
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSK-----GHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDE 77 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~-----g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~ 77 (445)
+-++|+.||+.+---.++.|..|.||.++|+.. .+.++|+.|.+.| +++......|.|+|++|+..|+.++++.
T Consensus 280 NF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~ 358 (452)
T KOG0514|consen 280 NFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKA 358 (452)
T ss_pred chHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHH
Confidence 568999999999777779999999999999854 4788999999876 5666567789999999999999999999
Q ss_pred HHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHH
Q 013331 78 ILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL 149 (445)
Q Consensus 78 Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll 149 (445)
|+..+ .++++.|.+|.|+|++|+++||+|++++|+... .+++...|.+|.|+|.+|...|+.+|.-.|.
T Consensus 359 LLacg-AdVNiQDdDGSTALMCA~EHGhkEivklLLA~p--~cd~sLtD~DgSTAl~IAleagh~eIa~mlY 427 (452)
T KOG0514|consen 359 LLACG-ADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVP--SCDISLTDVDGSTALSIALEAGHREIAVMLY 427 (452)
T ss_pred HHHcc-CCCccccCCccHHHhhhhhhChHHHHHHHhccC--cccceeecCCCchhhhhHHhcCchHHHHHHH
Confidence 99988 789999999999999999999999999999875 4567778999999999999999999987776
No 72
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.66 E-value=9.4e-16 Score=120.06 Aligned_cols=89 Identities=33% Similarity=0.528 Sum_probs=78.5
Q ss_pred HHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHH
Q 013331 29 LHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEA 108 (445)
Q Consensus 29 LH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~ 108 (445)
||+||+.|+.++++.|++.+.++.. |.||||+|+..|+.+++++|++.+ ..++.+|..|+||||+|+.+|+.++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL-----GNTALHYAAENGNLEIVKLLLENG-ADINSQDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS-----SSBHHHHHHHTTTHHHHHHHHHTT-TCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC-----CCCHHHHHHHcCCHHHHHHHHHhc-ccccccCCCCCCHHHHHHHcCCHHH
Confidence 8999999999999999998877744 889999999999999999999998 5678888999999999999999999
Q ss_pred HHHHHHhcCcccccCCCC
Q 013331 109 VKYLMETLNITKLANMPD 126 (445)
Q Consensus 109 v~~Ll~~~~~~~~~n~~d 126 (445)
+++|+++ +..+|.+|
T Consensus 75 ~~~Ll~~---g~~~~~~n 89 (89)
T PF12796_consen 75 VKLLLEH---GADVNIRN 89 (89)
T ss_dssp HHHHHHT---TT-TTSS-
T ss_pred HHHHHHc---CCCCCCcC
Confidence 9999988 66666654
No 73
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.62 E-value=6.4e-15 Score=121.90 Aligned_cols=123 Identities=40% Similarity=0.576 Sum_probs=109.0
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHH
Q 013331 55 PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILH 134 (445)
Q Consensus 55 ~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LH 134 (445)
+|.+|.||||+|+..|+.++++.|++.++. ....+..|.+|||.|+..++.+++++|++. +..++..+..|.||+|
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~-~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~---~~~~~~~~~~~~~~l~ 78 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEK---GADVNARDKDGNTPLH 78 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCccccCCCCCCHHH
Confidence 577899999999999999999999999854 367788999999999999999999999997 4467788899999999
Q ss_pred HHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHH
Q 013331 135 LATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPAL 185 (445)
Q Consensus 135 lA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L 185 (445)
.|+..++.+++++|++.+.+.+..|..|.||++.+.. .+..+++++|
T Consensus 79 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~L 125 (126)
T cd00204 79 LAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAK----NGHLEVVKLL 125 (126)
T ss_pred HHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHh----cCCHHHHHHh
Confidence 9999999999999999999999999999999999543 3556666665
No 74
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.56 E-value=5.2e-14 Score=129.00 Aligned_cols=129 Identities=33% Similarity=0.472 Sum_probs=111.5
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCC-----HHHHHHHHhcCC--Ccccccccc
Q 013331 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGR-----INIIDEILSLNL--QSAEMRTIH 92 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~-----~~iv~~Ll~~~~--~~~~~~~~~ 92 (445)
..+..+.+++|.++..+..++++.++..+.++ ..+|.+|.||||+|+..|+ .++++.|++.+. +....+|.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~ 146 (235)
T COG0666 68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED 146 (235)
T ss_pred cCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence 45566889999999999999999999999988 4489999999999999999 899999999987 577777889
Q ss_pred CcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcC
Q 013331 93 GETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 152 (445)
Q Consensus 93 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g 152 (445)
|.||||+|+..|+.++++.|++. +..++..+..|.|++|.|+..++.++++.+++.+
T Consensus 147 g~tpl~~A~~~~~~~~~~~ll~~---~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 147 GNTPLHWAALNGDADIVELLLEA---GADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCchhHHHHHcCchHHHHHHHhc---CCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999999887 6677778889999999999999999988888765
No 75
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.53 E-value=8.7e-15 Score=151.64 Aligned_cols=183 Identities=25% Similarity=0.334 Sum_probs=116.0
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 82 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~ 82 (445)
+.|.++.|+.++.+.- .+|+.|.+||-+|+..||..+|+.||++.+++....|+.+.|+|.+||..|+.++++.|+..+
T Consensus 769 h~e~vellv~rganie-hrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~g 847 (2131)
T KOG4369|consen 769 HREEVELLVVRGANIE-HRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAG 847 (2131)
T ss_pred cHHHHHHHHHhccccc-ccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhh
Confidence 4455555555554443 455555555555555555555555555555555555555555555555555555555555544
Q ss_pred CCccccccc-----------------------------------cCcchHhHHHHcCCHHHHHHHHHhcCcccccCCC-C
Q 013331 83 LQSAEMRTI-----------------------------------HGETVLHLTVKNNQYEAVKYLMETLNITKLANMP-D 126 (445)
Q Consensus 83 ~~~~~~~~~-----------------------------------~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~-d 126 (445)
...+.++. .|-.||.+|..+|+.+.++.|++. +.++|.+ .
T Consensus 848 -ankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~---gsdiNaqIe 923 (2131)
T KOG4369|consen 848 -ANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQP---GSDINAQIE 923 (2131)
T ss_pred -ccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcc---cchhccccc
Confidence 22222332 355666666666666666666655 5556655 3
Q ss_pred CCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013331 127 NDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 127 ~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
.+.||+|-+|+..|+.+++.+||.+.+++..+-+.|.|||.- ....+..++-++|+.+|++...
T Consensus 924 TNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme----~AsgGyvdvg~~li~~gad~na 987 (2131)
T KOG4369|consen 924 TNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLME----MASGGYVDVGNLLIAAGADTNA 987 (2131)
T ss_pred cccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccch----hhcCCccccchhhhhccccccc
Confidence 466778888888888888888888888887888888888876 5667778888888888887654
No 76
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.50 E-value=7.7e-13 Score=121.20 Aligned_cols=132 Identities=36% Similarity=0.486 Sum_probs=118.7
Q ss_pred CCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCC-----HHHHHHHHHhcCcccccCCCCC
Q 013331 53 SLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQ-----YEAVKYLMETLNITKLANMPDN 127 (445)
Q Consensus 53 ~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~-----~~~v~~Ll~~~~~~~~~n~~d~ 127 (445)
...+..+.+|+|.++..+..+++++++..+.+. ..++..|.||||+|+.+|+ .+++++|++........+.+|.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~ 145 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDE 145 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCC
Confidence 336777999999999999999999999999655 9999999999999999999 9999999998321126777899
Q ss_pred CCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhc
Q 013331 128 DGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAG 189 (445)
Q Consensus 128 ~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~g 189 (445)
+|+||||+|+..++.+++++|++.|++++..|..|.|+++. +...+..++.+.+++.+
T Consensus 146 ~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~----a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 146 DGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDP----AAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhh----hcccchHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999 77778888999998876
No 77
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.46 E-value=9.3e-14 Score=144.19 Aligned_cols=170 Identities=23% Similarity=0.322 Sum_probs=145.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHH
Q 013331 22 DLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTV 101 (445)
Q Consensus 22 d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~ 101 (445)
..+-.|+|-.||..||.|+|++|+.+|+++.. +|+.|.+||-+|+..||..+|+.|+++..+.....|..+.|+|-+|+
T Consensus 754 e~n~~t~LT~acaggh~e~vellv~rganieh-rdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac 832 (2131)
T KOG4369|consen 754 EPNIKTNLTSACAGGHREEVELLVVRGANIEH-RDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC 832 (2131)
T ss_pred CccccccccccccCccHHHHHHHHHhcccccc-cccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec
Confidence 33568999999999999999999999999966 99999999999999999999999999987777778899999999999
Q ss_pred HcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccc--cCCCCHHHHHhhhccccchh
Q 013331 102 KNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAIN--RKGYTALDVVESDASNSGAL 179 (445)
Q Consensus 102 ~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n--~~G~Tpl~~a~~~a~~~~~~ 179 (445)
..|+.++|++|+.. ++....++-...|||.+|...|..++++.|+..|.++|.+. +.|..||.+ +...++.
T Consensus 833 sggr~~vvelLl~~---gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLml----atmngh~ 905 (2131)
T KOG4369|consen 833 SGGRTRVVELLLNA---GANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLML----ATMNGHQ 905 (2131)
T ss_pred CCCcchHHHHHHHh---hccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhh----hhhcccc
Confidence 99999999999988 44455666777899999999999999999999998887654 678999998 5666777
Q ss_pred cHHHHHHHhcCcccCCCCCC
Q 013331 180 QIVPALEEAGARRCDQLPPM 199 (445)
Q Consensus 180 ~i~~~L~~~ga~~~~~~~~~ 199 (445)
...+.|++-|.+...++...
T Consensus 906 ~at~~ll~~gsdiNaqIeTN 925 (2131)
T KOG4369|consen 906 AATLSLLQPGSDINAQIETN 925 (2131)
T ss_pred HHHHHHhcccchhccccccc
Confidence 77777777776655554433
No 78
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.44 E-value=2.2e-13 Score=95.86 Aligned_cols=54 Identities=46% Similarity=0.835 Sum_probs=44.1
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHH
Q 013331 25 GHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEIL 79 (445)
Q Consensus 25 G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll 79 (445)
|+||||+||+.|+.++++.|+++|.+++. +|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~-~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINA-QDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT--B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHccCHHHHHHHC
Confidence 78999999999999999999999999877 6999999999999999999999885
No 79
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.41 E-value=7.2e-13 Score=99.62 Aligned_cols=100 Identities=21% Similarity=0.384 Sum_probs=58.9
Q ss_pred HHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHH
Q 013331 29 LHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEA 108 (445)
Q Consensus 29 LH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~ 108 (445)
..+++++|.++-|+..+..|-+++.+ ..|++|||+||-.|..+++++|+..+ ..++.+|+.|-|||..|+..||.++
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn~~--~ggR~plhyAAD~GQl~ilefli~iG-A~i~~kDKygITPLLsAvwEGH~~c 82 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVNEI--YGGRTPLHYAADYGQLSILEFLISIG-ANIQDKDKYGITPLLSAVWEGHRDC 82 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHHHH--hCCcccchHhhhcchHHHHHHHHHhc-cccCCccccCCcHHHHHHHHhhHHH
Confidence 44556666666666666666555442 25666666666666666666666665 4555566666666666666666666
Q ss_pred HHHHHHhcCcccccCCCCCCCCcHHH
Q 013331 109 VKYLMETLNITKLANMPDNDGNTILH 134 (445)
Q Consensus 109 v~~Ll~~~~~~~~~n~~d~~g~T~LH 134 (445)
|++|+++ +++-..+..+|.+.+.
T Consensus 83 VklLL~~---GAdrt~~~PdG~~~~e 105 (117)
T KOG4214|consen 83 VKLLLQN---GADRTIHAPDGTALIE 105 (117)
T ss_pred HHHHHHc---CcccceeCCCchhHHh
Confidence 6666665 4444444555555444
No 80
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.41 E-value=8.5e-13 Score=99.23 Aligned_cols=103 Identities=19% Similarity=0.241 Sum_probs=92.2
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCc
Q 013331 62 PLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKL 141 (445)
Q Consensus 62 pLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~ 141 (445)
-+.++.++|..+-|+..+..+ ...+. ...|++|||+|+-+|+.+++++|+.. ++.++.+|+.|-|||--|+..|+
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g-~nVn~-~~ggR~plhyAAD~GQl~ilefli~i---GA~i~~kDKygITPLLsAvwEGH 79 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEG-LNVNE-IYGGRTPLHYAADYGQLSILEFLISI---GANIQDKDKYGITPLLSAVWEGH 79 (117)
T ss_pred hHhhhhccCcHHHHHHHHHcc-ccHHH-HhCCcccchHhhhcchHHHHHHHHHh---ccccCCccccCCcHHHHHHHHhh
Confidence 467889999999999999887 33332 23799999999999999999999987 88999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccccCCCCHHHHH
Q 013331 142 TTMVIYLLKLGVDVNAINRKGYTALDVV 169 (445)
Q Consensus 142 ~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a 169 (445)
.++|++|++.|++......+|.+.++..
T Consensus 80 ~~cVklLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 80 RDCVKLLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred HHHHHHHHHcCcccceeCCCchhHHhhc
Confidence 9999999999999999999999988763
No 81
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.39 E-value=3.5e-13 Score=95.41 Aligned_cols=56 Identities=41% Similarity=0.614 Sum_probs=29.6
Q ss_pred HHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHH
Q 013331 10 LLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWA 66 (445)
Q Consensus 10 Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A 66 (445)
||+.++...+..|..|.||||+||..|+.+++++|++.|+++.. +|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~-~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA-KDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT----TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC-CcCCCCCHHHhC
Confidence 46666555568888888888888888888888888888888866 888888888886
No 82
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.35 E-value=3.8e-12 Score=135.22 Aligned_cols=108 Identities=24% Similarity=0.301 Sum_probs=94.2
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHH
Q 013331 28 PLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYE 107 (445)
Q Consensus 28 pLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~ 107 (445)
.||.|+..|+.++++.|++.|++++. +|.+|+||||+|+..|+.+++++|++.+ .+.+.+|.+|.||||+|+.+|+.+
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~-~d~~G~TpLh~Aa~~g~~eiv~~LL~~G-advn~~d~~G~TpLh~A~~~g~~~ 162 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNC-RDYDGRTPLHIACANGHVQVVRVLLEFG-ADPTLLDKDGKTPLELAEENGFRE 162 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCcHH
Confidence 58899999999999999999999977 8999999999999999999999999998 567889999999999999999999
Q ss_pred HHHHHHHh----cCcccccCCCCCCCCcHHHHHH
Q 013331 108 AVKYLMET----LNITKLANMPDNDGNTILHLAT 137 (445)
Q Consensus 108 ~v~~Ll~~----~~~~~~~n~~d~~g~T~LHlA~ 137 (445)
++++|+++ ...++..+..+.+|.+|+..+.
T Consensus 163 iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 163 VVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 99999987 3345566666777776665443
No 83
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.35 E-value=4.3e-12 Score=134.77 Aligned_cols=105 Identities=23% Similarity=0.234 Sum_probs=96.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCC
Q 013331 61 TPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGK 140 (445)
Q Consensus 61 TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~ 140 (445)
++|+.|+..|+.++++.|++.+ .+.+.+|.+|.||||+|+.+|+.+++++|++. +.++|.+|.+|+||||+|+..+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~G-adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~---Gadvn~~d~~G~TpLh~A~~~g 159 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGG-ADPNCRDYDGRTPLHIACANGHVQVVRVLLEF---GADPTLLDKDGKTPLELAEENG 159 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHCC
Confidence 3588999999999999999988 56788899999999999999999999999998 7889999999999999999999
Q ss_pred cHHHHHHHHhc-------CCCccccccCCCCHHHHH
Q 013331 141 LTTMVIYLLKL-------GVDVNAINRKGYTALDVV 169 (445)
Q Consensus 141 ~~~iv~~Ll~~-------g~~~~~~n~~G~Tpl~~a 169 (445)
+.+++++|+++ |++.+..+..|.+|+...
T Consensus 160 ~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~ 195 (664)
T PTZ00322 160 FREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLED 195 (664)
T ss_pred cHHHHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence 99999999988 899999999888887653
No 84
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.33 E-value=3.8e-12 Score=123.53 Aligned_cols=114 Identities=22% Similarity=0.271 Sum_probs=51.7
Q ss_pred HHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHH
Q 013331 32 SCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKY 111 (445)
Q Consensus 32 Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~ 111 (445)
|+..|.+++|+..+..-.|... .|++|.|+||-|+..||++||++|++.+ .+.+..|.+|+||||+|+..++..+++.
T Consensus 557 aaLeGEldlVq~~i~ev~DpSq-pNdEGITaLHNAiCaghyeIVkFLi~~g-anVNa~DSdGWTPLHCAASCNnv~~ckq 634 (752)
T KOG0515|consen 557 AALEGELDLVQRIIYEVTDPSQ-PNDEGITALHNAICAGHYEIVKFLIEFG-ANVNAADSDGWTPLHCAASCNNVPMCKQ 634 (752)
T ss_pred hhhcchHHHHHHHHHhhcCCCC-CCccchhHHhhhhhcchhHHHHHHHhcC-CcccCccCCCCchhhhhhhcCchHHHHH
Confidence 4444555555544443333322 4445555555555555555555555544 3444444555555555555555555555
Q ss_pred HHHhcCcccccCCCCCCCCcHHHHHH--hCCcHHHHHHHH
Q 013331 112 LMETLNITKLANMPDNDGNTILHLAT--AGKLTTMVIYLL 149 (445)
Q Consensus 112 Ll~~~~~~~~~n~~d~~g~T~LHlA~--~~~~~~iv~~Ll 149 (445)
|++.. .+.+-..-.++.|+...|- ..|+.+|.+||-
T Consensus 635 LVe~G--aavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 635 LVESG--AAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY 672 (752)
T ss_pred HHhcc--ceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence 55442 1122222234444444332 234455555554
No 85
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.31 E-value=1e-11 Score=112.40 Aligned_cols=112 Identities=21% Similarity=0.292 Sum_probs=98.4
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC
Q 013331 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 82 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~ 82 (445)
-++-...||.-...++ .+|.+|.|||..|+..|+.++|+.||+.|+|++.-++..++||||+||..|+.++++.|++.|
T Consensus 24 dt~~a~~LLs~vr~vn-~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaG 102 (396)
T KOG1710|consen 24 DTEAALALLSTVRQVN-QRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAG 102 (396)
T ss_pred cHHHHHHHHHHhhhhh-ccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhcc
Confidence 3556667777755555 889999999999999999999999999999999888999999999999999999999999998
Q ss_pred CCccccccccCcchHhHHHHcCCHHHHHHHHHhc
Q 013331 83 LQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETL 116 (445)
Q Consensus 83 ~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 116 (445)
.-....|.-|+|+-.+|+--|+.++|..+-++.
T Consensus 103 -a~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~~ 135 (396)
T KOG1710|consen 103 -ARMYLVNSVGRTAAQMAAFVGHHECVAIINNHI 135 (396)
T ss_pred -CccccccchhhhHHHHHHHhcchHHHHHHhccc
Confidence 566777888999999999999999998876543
No 86
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.26 E-value=4.5e-12 Score=89.68 Aligned_cols=50 Identities=36% Similarity=0.381 Sum_probs=28.8
Q ss_pred cccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHH
Q 013331 120 KLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVV 169 (445)
Q Consensus 120 ~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a 169 (445)
.++|.+|..|+||||+|+..|+.+++++|++.|++++.+|.+|+||+|+|
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56788888888888888888888888888888888888888888888873
No 87
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.25 E-value=1.7e-11 Score=86.15 Aligned_cols=53 Identities=40% Similarity=0.700 Sum_probs=24.5
Q ss_pred CccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHH
Q 013331 59 GRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYL 112 (445)
Q Consensus 59 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~L 112 (445)
|+||||+|+..|+.++++.|++.+ .+++.+|.+|+||||+|+.+|+.+++++|
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~-~din~~d~~g~t~lh~A~~~g~~~~~~~L 53 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG-ADINAQDEDGRTPLHYAAKNGNIDIVKFL 53 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT-SGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence 445555555555555555555554 33444455555555555555555555554
No 88
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.23 E-value=2.8e-11 Score=117.58 Aligned_cols=122 Identities=29% Similarity=0.297 Sum_probs=103.4
Q ss_pred ccHHH---HHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHH
Q 013331 60 RTPLH---WAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLA 136 (445)
Q Consensus 60 ~TpLh---~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA 136 (445)
..||- -|+..|..++|+.++..- .+....|..|-|+||-|+..||.++|++|++. +.++|..|.+||||||+|
T Consensus 548 fnPLaLLLDaaLeGEldlVq~~i~ev-~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~---ganVNa~DSdGWTPLHCA 623 (752)
T KOG0515|consen 548 FNPLALLLDAALEGELDLVQRIIYEV-TDPSQPNDEGITALHNAICAGHYEIVKFLIEF---GANVNAADSDGWTPLHCA 623 (752)
T ss_pred cchHHHHHhhhhcchHHHHHHHHHhh-cCCCCCCccchhHHhhhhhcchhHHHHHHHhc---CCcccCccCCCCchhhhh
Confidence 45644 488999999999998776 56677788999999999999999999999998 889999999999999999
Q ss_pred HhCCcHHHHHHHHhcCCCccccc-cCCCCHHHHHhhhccccchhcHHHHHHH
Q 013331 137 TAGKLTTMVIYLLKLGVDVNAIN-RKGYTALDVVESDASNSGALQIVPALEE 187 (445)
Q Consensus 137 ~~~~~~~iv~~Ll~~g~~~~~~n-~~G~Tpl~~a~~~a~~~~~~~i~~~L~~ 187 (445)
+.-++..+++.|++.|+.+-+.. .++.||.+-+.. ...+..++.++|..
T Consensus 624 ASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee--~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 624 ASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEE--MEEGYDQCSQYLYG 673 (752)
T ss_pred hhcCchHHHHHHHhccceEEeeecccccchhhhcch--hhhhHHHHHHHHHH
Confidence 99999999999999999876654 578899876442 34566778888853
No 89
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.13 E-value=3.2e-10 Score=102.74 Aligned_cols=120 Identities=18% Similarity=0.215 Sum_probs=94.9
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcC
Q 013331 25 GHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNN 104 (445)
Q Consensus 25 G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g 104 (445)
-..||.-+...|..+-...||+--..++. +|..|+|||..|+..|+.++++.+++.+.+...-.+..+.||||+|+..|
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~-~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQVNQ-RDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhhhhc-cCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 46788888888888888888876555655 78888888888888888888888888886555556667888888888888
Q ss_pred CHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHH
Q 013331 105 QYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYL 148 (445)
Q Consensus 105 ~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~L 148 (445)
+.++.+.|++. |+.....+.-|.|+-.+|+.-|+.++|..+
T Consensus 91 n~dvcrlllda---Ga~~~~vNsvgrTAaqmAAFVG~H~CV~iI 131 (396)
T KOG1710|consen 91 NQDVCRLLLDA---GARMYLVNSVGRTAAQMAAFVGHHECVAII 131 (396)
T ss_pred CchHHHHHHhc---cCccccccchhhhHHHHHHHhcchHHHHHH
Confidence 88888888876 555555667788888888888888887654
No 90
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.74 E-value=8e-09 Score=105.62 Aligned_cols=92 Identities=21% Similarity=0.243 Sum_probs=77.6
Q ss_pred HHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCC-CCCcHHHHHHhCCcHHHHHHHHhcCCCc
Q 013331 77 EILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDN-DGNTILHLATAGKLTTMVIYLLKLGVDV 155 (445)
Q Consensus 77 ~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~-~g~T~LHlA~~~~~~~iv~~Ll~~g~~~ 155 (445)
++-+.|....+++|..|+|+||+|+..|+.+++++|+++ |.+++.+|. .|+||||-|+..|+.+++..||.+|+.+
T Consensus 36 F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqh---Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL 112 (1267)
T KOG0783|consen 36 FSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQH---GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSL 112 (1267)
T ss_pred HHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhc---CceeeeccccccchHhhHhhhhchHHHHHHHHhcCCce
Confidence 444556666788888899999999999999999999988 777888876 5889999999999999999999999999
Q ss_pred cccccCCCCHHHHHhh
Q 013331 156 NAINRKGYTALDVVES 171 (445)
Q Consensus 156 ~~~n~~G~Tpl~~a~~ 171 (445)
.++|++|..||+.+.+
T Consensus 113 ~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 113 RIKDKEGLSPLQFLSR 128 (1267)
T ss_pred EEecccCCCHHHHHhh
Confidence 9999999999988765
No 91
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.73 E-value=4.3e-08 Score=95.03 Aligned_cols=95 Identities=26% Similarity=0.316 Sum_probs=87.1
Q ss_pred CCCCCCChH------HHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccC
Q 013331 20 KKDLNGHTP------LHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHG 93 (445)
Q Consensus 20 ~~d~~G~Tp------LH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g 93 (445)
-+|++|.|. ||-.++.|+.+..-.||..|+++++.-...|.||||+||+.|+..-+++|+-+| .++...|.+|
T Consensus 122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYG-AD~~a~d~~G 200 (669)
T KOG0818|consen 122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYG-ADPGAQDSSG 200 (669)
T ss_pred CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhcc-CCCCCCCCCC
Confidence 467778775 999999999999999999999999988889999999999999999999999998 6788899999
Q ss_pred cchHhHHHHcCCHHHHHHHHHh
Q 013331 94 ETVLHLTVKNNQYEAVKYLMET 115 (445)
Q Consensus 94 ~t~Lh~A~~~g~~~~v~~Ll~~ 115 (445)
+||+.+|-..||.++.+.|++.
T Consensus 201 mtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 201 MTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CcHHHHHHhcCchHHHHHHHHH
Confidence 9999999999999988888763
No 92
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.73 E-value=9.3e-09 Score=99.16 Aligned_cols=90 Identities=24% Similarity=0.304 Sum_probs=52.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHc
Q 013331 24 NGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKN 103 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 103 (445)
++-.++.+|++.|++..++.+.-.|.|+.. +|.+.+|+||+||..|+++++++|++.+..+...+|..|+|||.-|...
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~-~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F 583 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQGMDLET-KDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF 583 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHhcccccc-cccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence 344455566666666665555555555544 5555666666666666666666666655555555555566666666656
Q ss_pred CCHHHHHHHHH
Q 013331 104 NQYEAVKYLME 114 (445)
Q Consensus 104 g~~~~v~~Ll~ 114 (445)
+|.+++++|-+
T Consensus 584 ~h~~v~k~L~~ 594 (622)
T KOG0506|consen 584 KHKEVVKLLEE 594 (622)
T ss_pred CcHHHHHHHHH
Confidence 66665555544
No 93
>PF13606 Ank_3: Ankyrin repeat
Probab=98.73 E-value=1.4e-08 Score=61.47 Aligned_cols=29 Identities=48% Similarity=0.846 Sum_probs=25.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCCC
Q 013331 24 NGHTPLHLSCSKGHLEITRELLKLDPDLS 52 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~ 52 (445)
+|+||||+||+.|+.|+|++|+++|+|++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 48899999999999999999999988875
No 94
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.72 E-value=4e-08 Score=96.60 Aligned_cols=116 Identities=21% Similarity=0.174 Sum_probs=74.0
Q ss_pred HHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC-ccccccccCcchHhHHHHcCCHHH
Q 013331 30 HLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQ-SAEMRTIHGETVLHLTVKNNQYEA 108 (445)
Q Consensus 30 H~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~-~~~~~~~~g~t~Lh~A~~~g~~~~ 108 (445)
..|+..+++--++.+-..|.++.- ++.+..|-||+|+..|+-++|+++++++|. ..+..|..|+|+||-|+..++..+
T Consensus 871 l~av~~~D~~klqE~h~~gg~ll~-~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v 949 (1004)
T KOG0782|consen 871 LRAVLSSDLMKLQETHLNGGSLLI-QGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV 949 (1004)
T ss_pred HHHHHhccHHHHHHHHhcCCceEe-eCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence 344444444444444455556543 666677777777777777777777777663 345556667777777777777777
Q ss_pred HHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHH
Q 013331 109 VKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL 149 (445)
Q Consensus 109 v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll 149 (445)
+++|++. ++.+...|..|.||-.-|-..+..++.-||-
T Consensus 950 c~~lvda---gasl~ktd~kg~tp~eraqqa~d~dlaayle 987 (1004)
T KOG0782|consen 950 CQLLVDA---GASLRKTDSKGKTPQERAQQAGDPDLAAYLE 987 (1004)
T ss_pred HHHHHhc---chhheecccCCCChHHHHHhcCCchHHHHHh
Confidence 7777665 5556666677777777666666666666654
No 95
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.71 E-value=9.9e-09 Score=104.95 Aligned_cols=92 Identities=27% Similarity=0.310 Sum_probs=82.7
Q ss_pred HHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccc
Q 013331 10 LLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMR 89 (445)
Q Consensus 10 Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~ 89 (445)
+-+.+.++++..|..|+|+||+|+..|..++++.||++|.++.-.....|+||||-|...|+++++-.|+.++ ....+.
T Consensus 37 ~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g-~SL~i~ 115 (1267)
T KOG0783|consen 37 SEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG-RSLRIK 115 (1267)
T ss_pred HHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcC-CceEEe
Confidence 3445667788999999999999999999999999999999998755567999999999999999999999999 788999
Q ss_pred cccCcchHhHHHH
Q 013331 90 TIHGETVLHLTVK 102 (445)
Q Consensus 90 ~~~g~t~Lh~A~~ 102 (445)
|++|..||..-++
T Consensus 116 Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 116 DKEGLSPLQFLSR 128 (1267)
T ss_pred cccCCCHHHHHhh
Confidence 9999999988765
No 96
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.69 E-value=2.7e-08 Score=97.72 Aligned_cols=104 Identities=19% Similarity=0.231 Sum_probs=90.6
Q ss_pred HHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCC-CCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCcccc
Q 013331 10 LLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPD-LSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEM 88 (445)
Q Consensus 10 Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~-~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~ 88 (445)
...++.++. .++.+.+|.||+|+..|+-|+|+++|++++. +....|..|.|+||-||..++..++.+|++.+ .....
T Consensus 885 ~h~~gg~ll-~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdag-asl~k 962 (1004)
T KOG0782|consen 885 THLNGGSLL-IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAG-ASLRK 962 (1004)
T ss_pred HHhcCCceE-eeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcc-hhhee
Confidence 334444554 6788899999999999999999999999974 44557899999999999999999999999999 57777
Q ss_pred ccccCcchHhHHHHcCCHHHHHHHHHh
Q 013331 89 RTIHGETVLHLTVKNNQYEAVKYLMET 115 (445)
Q Consensus 89 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 115 (445)
.|.+|.||-..|-..|..+...||-.+
T Consensus 963 td~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 963 TDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred cccCCCChHHHHHhcCCchHHHHHhhh
Confidence 899999999999999999999999654
No 97
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.57 E-value=8.2e-08 Score=59.74 Aligned_cols=30 Identities=40% Similarity=0.785 Sum_probs=26.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCCCC
Q 013331 24 NGHTPLHLSCSKGHLEITRELLKLDPDLSS 53 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~ 53 (445)
+|.||||+|+..|+.++++.|+++|++++.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~ 30 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA 30 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence 588999999999999999999998888865
No 98
>PF13606 Ank_3: Ankyrin repeat
Probab=98.54 E-value=9.3e-08 Score=57.89 Aligned_cols=29 Identities=52% Similarity=0.732 Sum_probs=23.4
Q ss_pred CCCcHHHHHHhCCcHHHHHHHHhcCCCcc
Q 013331 128 DGNTILHLATAGKLTTMVIYLLKLGVDVN 156 (445)
Q Consensus 128 ~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~ 156 (445)
+|+||||+|+..|+.+++++|+++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 47888888888888888888888888776
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.53 E-value=1.2e-07 Score=59.00 Aligned_cols=33 Identities=45% Similarity=0.584 Sum_probs=28.3
Q ss_pred CCCcHHHHHHhCCcHHHHHHHHhcCCCcccccc
Q 013331 128 DGNTILHLATAGKLTTMVIYLLKLGVDVNAINR 160 (445)
Q Consensus 128 ~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~ 160 (445)
+|+||||+|+..++.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 588899999999999999999999988888764
No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.53 E-value=8e-08 Score=92.85 Aligned_cols=93 Identities=28% Similarity=0.255 Sum_probs=83.4
Q ss_pred ccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHH-hcCCCccccccCCCCHHHHH
Q 013331 91 IHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL-KLGVDVNAINRKGYTALDVV 169 (445)
Q Consensus 91 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll-~~g~~~~~~n~~G~Tpl~~a 169 (445)
.++...+.+|++.|....++.+.-. +.+++.+|.+..|+||+|+..|+.+++++|+ ..+++++.+|.+|.||||-
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~---g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDd- 579 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQ---GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDD- 579 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHh---cccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchH-
Confidence 4566789999999999999877655 7789999999999999999999999999999 6799999999999999998
Q ss_pred hhhccccchhcHHHHHHHhcC
Q 013331 170 ESDASNSGALQIVPALEEAGA 190 (445)
Q Consensus 170 ~~~a~~~~~~~i~~~L~~~ga 190 (445)
|..+++.+++++|.++.-
T Consensus 580 ---A~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 580 ---AKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred ---hHhcCcHHHHHHHHHHhc
Confidence 788899999999988643
No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.48 E-value=2.9e-07 Score=90.57 Aligned_cols=75 Identities=40% Similarity=0.531 Sum_probs=56.2
Q ss_pred HHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC
Q 013331 7 VKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 82 (445)
Q Consensus 7 v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~ 82 (445)
.+++...-....+.+|..|.||||+|+..||.+.++.|+..|+++.. +|++|++|||-|+..|+.+++..++.+.
T Consensus 37 ~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~-kN~~gWs~L~EAv~~g~~q~i~~vlr~~ 111 (560)
T KOG0522|consen 37 EQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI-KNNEGWSPLHEAVSTGNEQIITEVLRHL 111 (560)
T ss_pred HHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc-cccccccHHHHHHHcCCHHHHHHHHHHh
Confidence 34444443334567788888888888888888888888888888744 7888888888888888888887777664
No 102
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.36 E-value=1.8e-06 Score=84.06 Aligned_cols=93 Identities=24% Similarity=0.267 Sum_probs=75.0
Q ss_pred CCCCCccH------HHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCC
Q 013331 55 PDNEGRTP------LHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDND 128 (445)
Q Consensus 55 ~d~~G~Tp------Lh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~ 128 (445)
+|.+|.|. ||..++.|+.+.+--|+..|.+..-.--.+|.||||+|++.|+...+++|.-. |++++.+|.+
T Consensus 123 rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vY---GAD~~a~d~~ 199 (669)
T KOG0818|consen 123 RDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVY---GADPGAQDSS 199 (669)
T ss_pred CCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhc---cCCCCCCCCC
Confidence 56666654 88899999999888888888544444445789999999999999999988776 8888999999
Q ss_pred CCcHHHHHHhCCcHHHHHHHHh
Q 013331 129 GNTILHLATAGKLTTMVIYLLK 150 (445)
Q Consensus 129 g~T~LHlA~~~~~~~iv~~Ll~ 150 (445)
|.||+.+|-..||.++.+-|++
T Consensus 200 GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 200 GMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred CCcHHHHHHhcCchHHHHHHHH
Confidence 9999999998888887666553
No 103
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.33 E-value=9.8e-07 Score=86.90 Aligned_cols=87 Identities=25% Similarity=0.394 Sum_probs=66.0
Q ss_pred cHHHHHHHcCCHHHHHHHH-hcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhC
Q 013331 61 TPLHWAAIKGRINIIDEIL-SLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAG 139 (445)
Q Consensus 61 TpLh~Aa~~G~~~iv~~Ll-~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~ 139 (445)
-|||.++.....+-+...+ ..-...++.+|..|+||||+|+.-|+.+.++.|+.. ++++..++++|++|||-|+..
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a---~Adv~~kN~~gWs~L~EAv~~ 98 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSA---GADVSIKNNEGWSPLHEAVST 98 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhc---CCCccccccccccHHHHHHHc
Confidence 3588888877766554433 333345677788888888888888888888888876 667778888888888888888
Q ss_pred CcHHHHHHHHh
Q 013331 140 KLTTMVIYLLK 150 (445)
Q Consensus 140 ~~~~iv~~Ll~ 150 (445)
|+.+++..++.
T Consensus 99 g~~q~i~~vlr 109 (560)
T KOG0522|consen 99 GNEQIITEVLR 109 (560)
T ss_pred CCHHHHHHHHH
Confidence 88888777763
No 104
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.20 E-value=8e-06 Score=81.08 Aligned_cols=94 Identities=26% Similarity=0.279 Sum_probs=77.4
Q ss_pred HhHHHHcCCHHHHHHHHHhcCccccc-CCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccc
Q 013331 97 LHLTVKNNQYEAVKYLMETLNITKLA-NMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASN 175 (445)
Q Consensus 97 Lh~A~~~g~~~~v~~Ll~~~~~~~~~-n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~ 175 (445)
|..|+...+...+.+|+.+....... ...+.+|.|+||+|+..|+..+.++|+-+|+|+.+.|..|.|||.+ |..
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~y----ar~ 703 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFY----ARQ 703 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhh----Hhh
Confidence 45567767777777888775444333 3346788999999999999999999999999999999999999999 666
Q ss_pred cchhcHHHHHHHhcCcccC
Q 013331 176 SGALQIVPALEEAGARRCD 194 (445)
Q Consensus 176 ~~~~~i~~~L~~~ga~~~~ 194 (445)
.+..+++++|+++|.....
T Consensus 704 a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 704 AGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred cccHHHHHHHHHcCCCccc
Confidence 7788999999999986543
No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.18 E-value=3.4e-06 Score=83.61 Aligned_cols=87 Identities=23% Similarity=0.310 Sum_probs=66.6
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCC---CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcC
Q 013331 28 PLHLSCSKGHLEITRELLKLDPDL---SSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNN 104 (445)
Q Consensus 28 pLH~Aa~~g~~~iv~~LL~~~~~~---~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g 104 (445)
-|--|+...++..+-+||.+|... ...-+.+|+|+||+||..|++.+.++|+.++ .+...+|.+|+|+|.+|-..|
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg-~dv~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYG-VDVMARDAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhC-ccceecccCCchhhhhHhhcc
Confidence 466677777777788888776432 1224566788888888888888888888877 567778888888888888888
Q ss_pred CHHHHHHHHHh
Q 013331 105 QYEAVKYLMET 115 (445)
Q Consensus 105 ~~~~v~~Ll~~ 115 (445)
..|++..|++.
T Consensus 706 sqec~d~llq~ 716 (749)
T KOG0705|consen 706 SQECIDVLLQY 716 (749)
T ss_pred cHHHHHHHHHc
Confidence 88888888886
No 106
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.17 E-value=3.5e-06 Score=89.41 Aligned_cols=125 Identities=18% Similarity=0.113 Sum_probs=57.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhc-CCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHH
Q 013331 22 DLNGHTPLHLSCSKGHLEITRELLKL-DPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLT 100 (445)
Q Consensus 22 d~~G~TpLH~Aa~~g~~~iv~~LL~~-~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A 100 (445)
.-.|+|.||+++..++...++.+++- |..... .|.+|.--+|+ |..++.+.+-+++......++++|.+|+||||+|
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~~~~~~e-ld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wA 648 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLE-LDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWA 648 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhcccccCchh-hcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchH
Confidence 33455555555555555555555553 222211 34444444444 3334444444444444445555555555555555
Q ss_pred HHcCCHHHHHHHHHhcCccc---ccCCCCCCCCcHHHHHHhCCcHHHHHHH
Q 013331 101 VKNNQYEAVKYLMETLNITK---LANMPDNDGNTILHLATAGKLTTMVIYL 148 (445)
Q Consensus 101 ~~~g~~~~v~~Ll~~~~~~~---~~n~~d~~g~T~LHlA~~~~~~~iv~~L 148 (445)
+.+|+..++..|++...... +....+..|.|+--+|-.+|+..+..+|
T Consensus 649 a~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~l 699 (975)
T KOG0520|consen 649 AFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYL 699 (975)
T ss_pred hhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHH
Confidence 55555555555554321111 1222233445555555444444444444
No 107
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.11 E-value=1.7e-06 Score=92.15 Aligned_cols=78 Identities=35% Similarity=0.437 Sum_probs=73.4
Q ss_pred cCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhh
Q 013331 92 HGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVES 171 (445)
Q Consensus 92 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~ 171 (445)
.|.++||.|+.+|..-++++|+++ ++.+|..|..|+||||.+...|+...+..|+++|++.++.+.+|.+|++++..
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~---ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQN---GADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAME 731 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhc---CCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhh
Confidence 589999999999999999999998 67799999999999999999999999999999999999999999999999754
Q ss_pred h
Q 013331 172 D 172 (445)
Q Consensus 172 ~ 172 (445)
.
T Consensus 732 ~ 732 (785)
T KOG0521|consen 732 A 732 (785)
T ss_pred h
Confidence 3
No 108
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.97 E-value=7e-06 Score=87.62 Aligned_cols=84 Identities=21% Similarity=0.220 Sum_probs=46.4
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHH
Q 013331 58 EGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLAT 137 (445)
Q Consensus 58 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~ 137 (445)
.|.|+||.|+..|..-+++.|++.+ +.++.+|..|+||||.+...|+...+..++++ ++..+.-|.+|.+||+.|.
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~g-a~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~---~a~~~a~~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNG-ADVNALDSKGRTPLHHATASGHTSIACLLLKR---GADPNAFDPDGKLPLDIAM 730 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcC-CcchhhhccCCCcchhhhhhcccchhhhhccc---cccccccCccCcchhhHHh
Confidence 3455555555555555555555555 33555555555666655555555555555554 4455555555666666554
Q ss_pred hCCcHHHH
Q 013331 138 AGKLTTMV 145 (445)
Q Consensus 138 ~~~~~~iv 145 (445)
...+.+++
T Consensus 731 ~~~~~d~~ 738 (785)
T KOG0521|consen 731 EAANADIV 738 (785)
T ss_pred hhccccHH
Confidence 44444433
No 109
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.96 E-value=3.5e-05 Score=80.38 Aligned_cols=129 Identities=18% Similarity=0.163 Sum_probs=100.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCC--C-CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHH
Q 013331 24 NGHTPLHLSCSKGHLEITRELLKLDPD--L-SSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLT 100 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~~~~--~-~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A 100 (445)
.+.--.-.|++.|+.-.|+..++.... . .+..|.-|+++||+|..+.+.++++.|+++.-.. ..+|.+|
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~a 95 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLA 95 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHH
Confidence 345557789999999999999985443 1 1236888999999999999999999999986321 5699999
Q ss_pred HHcCCHHHHHHHHHhcCcccc-------cCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCcccccc
Q 013331 101 VKNNQYEAVKYLMETLNITKL-------ANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINR 160 (445)
Q Consensus 101 ~~~g~~~~v~~Ll~~~~~~~~-------~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~ 160 (445)
+..|..++|+.++.+.....- ....-..+-|||.+||..++.+|+++|+++|+.+...-.
T Consensus 96 I~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~ 162 (822)
T KOG3609|consen 96 IAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHD 162 (822)
T ss_pred HHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCcc
Confidence 999999999999987432110 011123467999999999999999999999998765433
No 110
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.92 E-value=1.1e-05 Score=85.89 Aligned_cols=127 Identities=23% Similarity=0.194 Sum_probs=97.5
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHH
Q 013331 55 PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILH 134 (445)
Q Consensus 55 ~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LH 134 (445)
..-.|+|-+|+++..++.-.++.+++-........|.+|...+|+ |..++.+..-+++.. .+..++.+|..|+||||
T Consensus 570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~--~~~ai~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISA--DGVAIDIRDRNGWTPLH 646 (975)
T ss_pred CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEee--cccccccccCCCCcccc
Confidence 566789999999999999999999986224556677889999999 455666666555543 25568899999999999
Q ss_pred HHHhCCcHHHHHHHHhcCCCcc------ccccCCCCHHHHHhhhccccchhcHHHHHHHh
Q 013331 135 LATAGKLTTMVIYLLKLGVDVN------AINRKGYTALDVVESDASNSGALQIVPALEEA 188 (445)
Q Consensus 135 lA~~~~~~~iv~~Ll~~g~~~~------~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ 188 (445)
+|+..|+..++..|.+.|++.. ..+..|.|+-++ +...++..+..+|.+.
T Consensus 647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~l----a~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADL----ARANGHKGIAGYLSEK 702 (975)
T ss_pred hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhh----hhcccccchHHHHhhh
Confidence 9999999999999997776644 334469999999 4455666666666543
No 111
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.72 E-value=7.8e-05 Score=70.72 Aligned_cols=85 Identities=19% Similarity=0.275 Sum_probs=66.8
Q ss_pred hhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCc
Q 013331 15 QEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGE 94 (445)
Q Consensus 15 ~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~ 94 (445)
|.+..+.+. .--|..||+.|..+.|+.|++.|.+++. .|+-..+||.+|+..||.++++.|+++|+ .......+|.
T Consensus 28 ~s~~~~~~~--f~elceacR~GD~d~v~~LVetgvnVN~-vD~fD~spL~lAsLcGHe~vvklLLenGA-iC~rdtf~G~ 103 (516)
T KOG0511|consen 28 PSVPLKKVP--FGELCEACRAGDVDRVRYLVETGVNVNA-VDRFDSSPLYLASLCGHEDVVKLLLENGA-ICSRDTFDGD 103 (516)
T ss_pred cccccccCc--hHHHHHHhhcccHHHHHHHHHhCCCcch-hhcccccHHHHHHHcCcHHHHHHHHHcCC-cccccccCcc
Confidence 444434443 3348999999999999999999999988 89999999999999999999999999994 4444455676
Q ss_pred chHhHHHHcC
Q 013331 95 TVLHLTVKNN 104 (445)
Q Consensus 95 t~Lh~A~~~g 104 (445)
-++ +++.+.
T Consensus 104 RC~-YgaLnd 112 (516)
T KOG0511|consen 104 RCH-YGALND 112 (516)
T ss_pred hhh-hhhhhH
Confidence 664 444443
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.70 E-value=8.4e-05 Score=64.16 Aligned_cols=63 Identities=30% Similarity=0.269 Sum_probs=29.6
Q ss_pred cCCCCCCCCcHHHHHHhCCcHHHHHHHHhcC-CCccccccCCCCHHHHHhhhccccchhcHHHHHHHh
Q 013331 122 ANMPDNDGNTILHLATAGKLTTMVIYLLKLG-VDVNAINRKGYTALDVVESDASNSGALQIVPALEEA 188 (445)
Q Consensus 122 ~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g-~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ 188 (445)
+|.+|..|+|+|++|+..|..+.+.+|+.+| +.+...|..|.+++.+ +...+..+++..|.+.
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaql----aek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQL----AEKGGAQAFVHSLFEN 68 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHH----HHhcChHHHHHHHHHH
Confidence 4444445555555555555555555555444 4444444444444444 2333344444444443
No 113
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.68 E-value=0.00012 Score=63.33 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=51.3
Q ss_pred cCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCC
Q 013331 19 WKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNL 83 (445)
Q Consensus 19 ~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~ 83 (445)
+.+|..|||||++|+..|+.+.|.+|+.+|.......|..|.+++.+|-+.|..++++.|.+...
T Consensus 6 n~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ 70 (223)
T KOG2384|consen 6 NARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDR 70 (223)
T ss_pred cchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence 46788888888888888888888888888844434578888888888888888888888887643
No 114
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.53 E-value=0.00023 Score=74.56 Aligned_cols=106 Identities=20% Similarity=0.251 Sum_probs=85.5
Q ss_pred CHHHHHHHHHHhchh--hh-cCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHH
Q 013331 2 HVADIVKELLEARQE--FA-WKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEI 78 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~--~~-~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~L 78 (445)
|+.-.|+.+++.... ++ +..|.-|.++||+|+.+.|.|++++|+++.... ..+|-+|+..|.+++++.+
T Consensus 36 gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI~~~~v~~VE~l 107 (822)
T KOG3609|consen 36 GDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAIAVGSVPLVELL 107 (822)
T ss_pred CChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHHHHHHHHHHHHH
Confidence 455577888877655 43 578889999999999999999999999986554 2488999999999999999
Q ss_pred HhcCCCcc---------ccccccCcchHhHHHHcCCHHHHHHHHHh
Q 013331 79 LSLNLQSA---------EMRTIHGETVLHLTVKNNQYEAVKYLMET 115 (445)
Q Consensus 79 l~~~~~~~---------~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 115 (445)
+.+..... ...-..+.|||.+||-.++.|++++|+.+
T Consensus 108 l~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~k 153 (822)
T KOG3609|consen 108 LVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTR 153 (822)
T ss_pred HhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHc
Confidence 98653221 11223478999999999999999999987
No 115
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.99 E-value=0.0018 Score=61.81 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=53.0
Q ss_pred ccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcH
Q 013331 60 RTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTI 132 (445)
Q Consensus 60 ~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~ 132 (445)
+--|..||+.|..+.++.|++.| ..++.+|.....||.+|+..||.++|++|+++ |+.-..-.-+|.-.
T Consensus 37 f~elceacR~GD~d~v~~LVetg-vnVN~vD~fD~spL~lAsLcGHe~vvklLLen---GAiC~rdtf~G~RC 105 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETG-VNVNAVDRFDSSPLYLASLCGHEDVVKLLLEN---GAICSRDTFDGDRC 105 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhC-CCcchhhcccccHHHHHHHcCcHHHHHHHHHc---CCcccccccCcchh
Confidence 34578888888888888888876 67888888888888888888888888888887 55444434455554
No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.97 E-value=0.0013 Score=38.05 Aligned_cols=27 Identities=44% Similarity=0.822 Sum_probs=19.9
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCC
Q 013331 25 GHTPLHLSCSKGHLEITRELLKLDPDL 51 (445)
Q Consensus 25 G~TpLH~Aa~~g~~~iv~~LL~~~~~~ 51 (445)
|.||||+|+..|+.++++.|++.+.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 677777777777777777777776644
No 117
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.78 E-value=0.0031 Score=62.30 Aligned_cols=64 Identities=25% Similarity=0.275 Sum_probs=50.1
Q ss_pred HHHHHHHHHhcCccc---ccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHH
Q 013331 106 YEAVKYLMETLNITK---LANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVV 169 (445)
Q Consensus 106 ~~~v~~Ll~~~~~~~---~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a 169 (445)
...+++|.++.-.+. .....|..-.|+||+|+..|..+++.+||+.|+|+..+|..|.||+++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls 470 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLS 470 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCccccc
Confidence 566777776632221 1223345567999999999999999999999999999999999999983
No 118
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.28 E-value=0.0072 Score=34.64 Aligned_cols=27 Identities=41% Similarity=0.525 Sum_probs=17.1
Q ss_pred CCcHHHHHHhCCcHHHHHHHHhcCCCc
Q 013331 129 GNTILHLATAGKLTTMVIYLLKLGVDV 155 (445)
Q Consensus 129 g~T~LHlA~~~~~~~iv~~Ll~~g~~~ 155 (445)
|+||+|+|+..++.++++.|++.+.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 566666666666666666666665544
No 119
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.27 E-value=0.0064 Score=60.12 Aligned_cols=63 Identities=19% Similarity=0.079 Sum_probs=41.3
Q ss_pred HHHHHHHhhcCCCCCCC-----CCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHH
Q 013331 38 LEITRELLKLDPDLSSL-----PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTV 101 (445)
Q Consensus 38 ~~iv~~LL~~~~~~~~~-----~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~ 101 (445)
...++.|.+++.+.+.. .+.---|+||+|+..|..+++.+||+.+ +++..+|..|+||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg-~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEG-CDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhc-CCchhcccCCCCcccccc
Confidence 44566666665554321 1222347777777777777777777777 667777777777777766
No 120
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=91.44 E-value=1.1 Score=40.40 Aligned_cols=117 Identities=22% Similarity=0.258 Sum_probs=77.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCccc--ccCCCCCCCCcHHHHH--Hh
Q 013331 63 LHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITK--LANMPDNDGNTILHLA--TA 138 (445)
Q Consensus 63 Lh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--~~n~~d~~g~T~LHlA--~~ 138 (445)
|--|+...+.+-+..++.... +-.+++.+|..+++.+++-+|+.+++... ...... +.--+.++ ..
T Consensus 157 ledAV~AsN~~~i~~~VtdKk--------dA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~--~~ydieY~LS~h 226 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTDKK--------DAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEK--ELYDIEYLLSEH 226 (284)
T ss_pred HHHHHhhcCHHHHHHHhcchH--------HHHHHHHHHhcccHHHHHHHHHhhcceecchhhhcCc--chhhHHHHHhhc
Confidence 455777777766666654331 24578999999999999999998764321 111111 11122222 23
Q ss_pred CCcHHHHHHHHhcC-CCccc---cccCCCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013331 139 GKLTTMVIYLLKLG-VDVNA---INRKGYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 139 ~~~~~iv~~Ll~~g-~~~~~---~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
.....+.++++.+| +++|. +-+.|.|-||- |...+..+++.+|+++|+.+.
T Consensus 227 ~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDN----A~Ky~~~emi~~Llk~GA~~~ 281 (284)
T PF06128_consen 227 SASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDN----AMKYKNSEMIAFLLKYGAISG 281 (284)
T ss_pred CCcHHHHHHHHhccccccchhhhccCCcchHHHh----HHhcCcHHHHHHHHHcCcccc
Confidence 34677888888776 56664 34579999998 677788899999999998654
No 121
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=87.11 E-value=5.8 Score=34.05 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=25.8
Q ss_pred cccccCCcccchhHhHHHHHHHHHHHHHHHHH
Q 013331 286 KSLVGKQTSFKVFMVCNIVALFLSLGIVIFLV 317 (445)
Q Consensus 286 ~~~~~~~~~F~~F~~~n~~a~~~S~~~~~~~~ 317 (445)
+..+.+.++|+.|++.|.++..-|+..++.-+
T Consensus 35 ~a~f~d~~af~y~v~anai~~~Ysll~l~~~~ 66 (154)
T TIGR01569 35 KAKFSDLPAFVYFVVANAIACGYSLLSLVVSI 66 (154)
T ss_pred eeeeeccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778999999999999999987766543
No 122
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=85.97 E-value=4.5 Score=36.60 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=71.3
Q ss_pred HHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccc----cCcchHhHHHH--
Q 013331 29 LHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTI----HGETVLHLTVK-- 102 (445)
Q Consensus 29 LH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~----~g~t~Lh~A~~-- 102 (445)
|--|+...+.+-+..++....+ -.++|-+|..++..+++-+|+.+-. ....|. .+..-+-++..
T Consensus 157 ledAV~AsN~~~i~~~VtdKkd--------A~~Am~~si~~~K~dva~~lls~f~--ft~~dv~~~~~~~ydieY~LS~h 226 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTDKKD--------AHQAMWLSIGNAKEDVALYLLSKFN--FTKQDVASMEKELYDIEYLLSEH 226 (284)
T ss_pred HHHHHhhcCHHHHHHHhcchHH--------HHHHHHHHhcccHHHHHHHHHhhcc--eecchhhhcCcchhhHHHHHhhc
Confidence 4556666666666665543322 2468888888888888888887531 111111 12222222222
Q ss_pred cCCHHHHHHHHHhcCcccccC---CCCCCCCcHHHHHHhCCcHHHHHHHHhcCCC
Q 013331 103 NNQYEAVKYLMETLNITKLAN---MPDNDGNTILHLATAGKLTTMVIYLLKLGVD 154 (445)
Q Consensus 103 ~g~~~~v~~Ll~~~~~~~~~n---~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~ 154 (445)
..+..++++.+++.- ..+| .+-+.|.|.|.-|++.++.+++.+|+++|+-
T Consensus 227 ~a~~kvL~~Fi~~Gl--v~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 227 SASYKVLEYFINRGL--VDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred CCcHHHHHHHHhccc--cccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 234667777777631 1223 3456799999999999999999999999874
No 123
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=84.96 E-value=1.7 Score=32.37 Aligned_cols=46 Identities=24% Similarity=0.244 Sum_probs=26.9
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013331 28 PLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 28 pLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
-|..|+..|+.|+++.+++.+ .. + ...+..|+...+.+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~----~---~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KP----D---NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-cc----H---HHHHHHHHHHhhHHHHHHHHHh
Confidence 356666666666666666543 11 1 2456666666666666666664
No 124
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=83.62 E-value=2.2 Score=31.67 Aligned_cols=48 Identities=27% Similarity=0.448 Sum_probs=39.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhc
Q 013331 61 TPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETL 116 (445)
Q Consensus 61 TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 116 (445)
..+..|...|+.|+++.+++.+. . ....+..|+..-+.+++++|+++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~-~-------~~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNK-P-------DNDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhc-c-------HHHHHHHHHHHhhHHHHHHHHHhc
Confidence 46889999999999999987652 1 156799999999999999998873
No 125
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.87 E-value=4.8 Score=30.12 Aligned_cols=49 Identities=10% Similarity=0.080 Sum_probs=34.1
Q ss_pred chhHhHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 013331 296 KVFMVCNIVALFLSLGIVIFLVSIIPFQRKSMMQLLVVTHRVMWLSVSFLAAAYIAAIWTIL 357 (445)
Q Consensus 296 ~~F~~~n~~a~~~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~si~~m~~af~~~~~~v~ 357 (445)
.+++++|.+||-.|...+.+-+..+|...... ...+|.++|..|..+.+
T Consensus 14 pawi~f~waafg~s~~m~~~gi~~lPVD~w~K-------------Gy~~MG~lfltgSt~tL 62 (95)
T COG4298 14 PAWIMFNWAAFGASYFMLGLGIWLLPVDLWTK-------------GYWAMGILFLTGSTVTL 62 (95)
T ss_pred chhHhHHHHHHHHHHHHHHHHhheechHHHHH-------------HHHHHHHHHHhcchhhh
Confidence 36778899999999887777677777654322 23357788888875544
No 126
>PF14126 DUF4293: Domain of unknown function (DUF4293)
Probab=78.46 E-value=25 Score=30.00 Aligned_cols=27 Identities=22% Similarity=0.469 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHhccccchhhHHHHHHH
Q 013331 307 FLSLGIVIFLVSIIPFQRKSMMQLLVV 333 (445)
Q Consensus 307 ~~S~~~~~~~~~~~~~~~~~~~~~l~~ 333 (445)
.+.+++++-+++|+-+++|.+..++..
T Consensus 59 l~~l~~~lal~aIFlyKnR~lQ~~L~~ 85 (149)
T PF14126_consen 59 LLVLSAILALIAIFLYKNRKLQIRLCV 85 (149)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 344455666777877877665544444
No 127
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=77.73 E-value=22 Score=31.22 Aligned_cols=136 Identities=15% Similarity=0.108 Sum_probs=88.8
Q ss_pred ChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCC
Q 013331 26 HTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQ 105 (445)
Q Consensus 26 ~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~ 105 (445)
+-.|-.|+..+.+.+++..-+...+- -...++-+-.||+..+.|+|+++-+.-+ -.+-++.+-+|...++
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~qnL~------i~~~~~iFdIA~~~kD 116 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIGQNLH------IYNPEDIFDIAFAKKD 116 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHhhccC------CCCchhhhhhhhhccc
Confidence 34577888999998888776543222 1235678889999999999999955321 1234567888888888
Q ss_pred HHHHHH----HHHhcCcccccCCCCCC----CCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccc
Q 013331 106 YEAVKY----LMETLNITKLANMPDND----GNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSG 177 (445)
Q Consensus 106 ~~~v~~----Ll~~~~~~~~~n~~d~~----g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~ 177 (445)
.++... +.++. .+..+.+ -+.-|+.|+..|....+.-.+++|.+++. +++-. |...+
T Consensus 117 lsLyslGY~l~~~~~-----~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~----Av~yn 181 (192)
T PF03158_consen 117 LSLYSLGYKLLFNRM-----MSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQ----AVKYN 181 (192)
T ss_pred hhHHHHHHHHHHhhc-----ccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHH----HHHhh
Confidence 776432 22221 1110111 12347789999999998888899988753 34433 66677
Q ss_pred hhcHHHHHH
Q 013331 178 ALQIVPALE 186 (445)
Q Consensus 178 ~~~i~~~L~ 186 (445)
++.|..+++
T Consensus 182 hRkIL~yfi 190 (192)
T PF03158_consen 182 HRKILDYFI 190 (192)
T ss_pred HHHHHHHhh
Confidence 777877765
No 128
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=76.47 E-value=0.82 Score=42.44 Aligned_cols=14 Identities=14% Similarity=0.192 Sum_probs=0.0
Q ss_pred CCchHHHHHHHHHh
Q 013331 361 RGMVWVSAAVVSLG 374 (445)
Q Consensus 361 ~~~~w~~~~~~~~~ 374 (445)
.+.+|..++.++++
T Consensus 132 ~GAs~WtiLaFcLA 145 (381)
T PF05297_consen 132 LGASFWTILAFCLA 145 (381)
T ss_dssp --------------
T ss_pred hhhHHHHHHHHHHH
Confidence 34455555555555
No 129
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=68.27 E-value=23 Score=34.46 Aligned_cols=20 Identities=20% Similarity=0.424 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 013331 337 VMWLSVSFLAAAYIAAIWTI 356 (445)
Q Consensus 337 ~l~~si~~m~~af~~~~~~v 356 (445)
+..+|+..+..+|++|+|=+
T Consensus 265 LTi~s~iflPpTlIagiyGM 284 (322)
T COG0598 265 LTIVSTIFLPPTLITGFYGM 284 (322)
T ss_pred HHHHHHHHHhhHHHHccccc
Confidence 44468888999999999943
No 130
>KOG4193 consensus G protein-coupled receptors [Signal transduction mechanisms]
Probab=66.70 E-value=1.1e+02 Score=32.63 Aligned_cols=63 Identities=21% Similarity=0.134 Sum_probs=36.3
Q ss_pred HHHHHHH-HHHHHHHHHHHhhccCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhHHhhhh
Q 013331 337 VMWLSVS-FLAAAYIAAIWTILPRGRGMVWVSAAVVSLGGGFTLAIFTGLGVLLARHWLRKWEWRKMK 403 (445)
Q Consensus 337 ~l~~si~-~m~~af~~~~~~v~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (445)
..++++. -|.++-+.|++.+++. . .-+..++..+. =.+=.+|+++.+-+.++..||-..|..+
T Consensus 517 ~~~l~L~~lLGlTW~fgi~s~~~~-~--~~v~~YlFti~-NalQG~fIFi~~cll~~kvr~~~~k~~~ 580 (610)
T KOG4193|consen 517 RSALALLFLLGLTWIFGIFSWLPG-T--SVVFAYLFTIF-NALQGVFIFIFHCLLRKKVRKEYRKWLC 580 (610)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-c--chHHHHHHHHH-HHhhhhHhhHhhhhhhHHHHHHHHHHhc
Confidence 3444444 3567889999888873 1 11222222222 1244567777778888887777655543
No 131
>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional
Probab=66.31 E-value=48 Score=32.12 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh-ccCCCCchHHHHHHHHHh
Q 013331 337 VMWLSVSFLAAAYIAAIWTI-LPRGRGMVWVSAAVVSLG 374 (445)
Q Consensus 337 ~l~~si~~m~~af~~~~~~v-~~~~~~~~w~~~~~~~~~ 374 (445)
+..+|+.+|..++++|+|=+ .++-++..|...+.++++
T Consensus 259 lTv~s~if~pptliagiyGMNf~~mP~~~~~~g~~~~l~ 297 (316)
T PRK11085 259 FSVVSVVFLPPTLVASSYGMNFEFMPELKWSFGYPGAII 297 (316)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCCCCCcHHHHHHHH
Confidence 34478888999999999943 221223345444443333
No 132
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=65.56 E-value=22 Score=34.32 Aligned_cols=20 Identities=25% Similarity=0.531 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 013331 337 VMWLSVSFLAAAYIAAIWTI 356 (445)
Q Consensus 337 ~l~~si~~m~~af~~~~~~v 356 (445)
+..+|+.++..+|++|+|=+
T Consensus 261 LTvvt~IflP~t~IaGiyGM 280 (318)
T TIGR00383 261 LTVVSTIFIPLTFIAGIYGM 280 (318)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 34478888999999999953
No 133
>PF06011 TRP: Transient receptor potential (TRP) ion channel; InterPro: IPR010308 This family consists of hypothetical proteins of unknown function found in fungi.
Probab=63.29 E-value=48 Score=33.77 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=16.4
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh
Q 013331 364 VWVSAAVVSLGGGFTLAIFTGLGVLLARHWLRK 396 (445)
Q Consensus 364 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (445)
.|+.+.++++-+.+.+.+++.+.+..+...+||
T Consensus 385 ~~vg~vi~~i~~~v~~~~~i~~~~~~~~~~~~~ 417 (438)
T PF06011_consen 385 TVVGYVIIIINAIVLLILFILIIVSTIISLFRK 417 (438)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 466666666654444444444434444444333
No 134
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=63.00 E-value=30 Score=25.68 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=15.0
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHhhhHHhh
Q 013331 372 SLGGGFTLAIFTGLGVLLARHWLRKWEWRK 401 (445)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (445)
.++.++.+.+++.+.+.++...+++...++
T Consensus 11 Gm~iVF~~L~lL~~~i~l~~~~~~~~~~~~ 40 (79)
T PF04277_consen 11 GMGIVFLVLILLILVISLMSKLIRKFAPKE 40 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 333334444444555566666655554444
No 135
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=62.78 E-value=34 Score=29.85 Aligned_cols=37 Identities=16% Similarity=0.293 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013331 326 SMMQLLVVTHRVMWLSVSFLAAAYIAAIWTILPRGRG 362 (445)
Q Consensus 326 ~~~~~l~~~~~~l~~si~~m~~af~~~~~~v~~~~~~ 362 (445)
++...++++...+++..-++++|||+++-++-|...+
T Consensus 79 p~ialimi~iAs~llP~PsLVIaYCl~mqi~~~~~~~ 115 (189)
T PF05313_consen 79 PLIALIMIIIASLLLPFPSLVIAYCLSMQIYNPGANN 115 (189)
T ss_pred cHHHHHHHHHHHHHcCccHHHHHHHHHheeecCCCcc
Confidence 3444455555566677778888888888665554333
No 136
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=62.74 E-value=14 Score=32.37 Aligned_cols=81 Identities=21% Similarity=0.232 Sum_probs=54.1
Q ss_pred ChHHHHHHHcCCHHHHH----HHhhcCCCCCCCCCCC--CccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhH
Q 013331 26 HTPLHLSCSKGHLEITR----ELLKLDPDLSSLPDNE--GRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 99 (445)
Q Consensus 26 ~TpLH~Aa~~g~~~iv~----~LL~~~~~~~~~~d~~--G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~ 99 (445)
.+-.-+|...++.++.. .+.++..+... .|.. -.--|..|+..|-...+.+.+++|... +. ++|..
T Consensus 105 ~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~-~d~~~ll~~hl~~a~~kgll~F~letlkygg~~-~~------~vls~ 176 (192)
T PF03158_consen 105 EDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHN-EDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNV-DI------IVLSQ 176 (192)
T ss_pred hhhhhhhhhccchhHHHHHHHHHHhhcccccc-cCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcc-cH------HHHHH
Confidence 45677888888876543 34444322211 1111 112478899999999999999998532 21 78999
Q ss_pred HHHcCCHHHHHHHHH
Q 013331 100 TVKNNQYEAVKYLME 114 (445)
Q Consensus 100 A~~~g~~~~v~~Ll~ 114 (445)
|+++++..++.+++.
T Consensus 177 Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 177 AVKYNHRKILDYFIR 191 (192)
T ss_pred HHHhhHHHHHHHhhc
Confidence 999999999988763
No 137
>COG1294 AppB Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]
Probab=58.83 E-value=1e+02 Score=30.21 Aligned_cols=34 Identities=18% Similarity=0.026 Sum_probs=18.1
Q ss_pred HhHHHHHhccchhHHHHHHHHHHhhcccccCCCC
Q 013331 246 LQTEGLRNARKTIIIVAVLIATVTFAAGINPPGG 279 (445)
Q Consensus 246 ~~~e~lk~t~~s~lvVA~LIATvtFaA~~t~PGG 279 (445)
.+++..+.++.+..+++....-++..+.++.+|.
T Consensus 195 l~~rA~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (346)
T COG1294 195 LQERARKLARIAALLTLVGFLLFGVWVTPGLDGF 228 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3444555555555555555555554555555554
No 138
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=57.61 E-value=1.2e+02 Score=25.74 Aligned_cols=58 Identities=14% Similarity=0.224 Sum_probs=26.7
Q ss_pred CcccchhHhHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013331 292 QTSFKVFMVCNIVALFLSLGIVIFLVSIIPFQRKSMMQLLVVTHRVMWLSVSFLAAAYIAA 352 (445)
Q Consensus 292 ~~~F~~F~~~n~~a~~~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~si~~m~~af~~~ 352 (445)
...|..+++.+.+.........+.+....-.|++..++...+ .+.+++..+.+...+.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~l~~~~lffkr~~~~P~~~I~---~ll~~v~~~~l~~~~~ 106 (149)
T PF10754_consen 49 WSAFYALWYFEVAINIAMWLFTLWLLYLFFKRKRRFPKLYII---WLLISVLFIALDAFAF 106 (149)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhHHHHHH---HHHHHHHHHHHHHHHH
Confidence 344555665555544433333332222222334455555433 5556777555544333
No 139
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=57.50 E-value=8.5 Score=31.93 Aligned_cols=7 Identities=43% Similarity=1.037 Sum_probs=3.6
Q ss_pred HHHHHHH
Q 013331 365 WVSAAVV 371 (445)
Q Consensus 365 w~~~~~~ 371 (445)
|++++++
T Consensus 2 W~l~~ii 8 (130)
T PF12273_consen 2 WVLFAII 8 (130)
T ss_pred eeeHHHH
Confidence 6555443
No 140
>PF07086 DUF1352: Protein of unknown function (DUF1352); InterPro: IPR009787 This family consists of several hypothetical eukaryotic proteins of around 190 residues in length. The function of this family is unknown.
Probab=55.67 E-value=1.5e+02 Score=26.30 Aligned_cols=19 Identities=16% Similarity=0.188 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHhhhHHhhh
Q 013331 384 GLGVLLARHWLRKWEWRKM 402 (445)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~ 402 (445)
++...|+..|..+-..||+
T Consensus 167 Yf~~kL~~aW~~~~~~kk~ 185 (186)
T PF07086_consen 167 YFSKKLLDAWQTRTQKKKK 185 (186)
T ss_pred HHHHHHHHHHHhccccccc
Confidence 3556777777655554443
No 141
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=55.15 E-value=8.7 Score=33.99 Aligned_cols=14 Identities=21% Similarity=0.078 Sum_probs=6.6
Q ss_pred cHHHHHHhCCcHHH
Q 013331 131 TILHLATAGKLTTM 144 (445)
Q Consensus 131 T~LHlA~~~~~~~i 144 (445)
.|||-|+.-++.++
T Consensus 224 ~~LHk~iki~REDV 237 (280)
T KOG4591|consen 224 NPLHKAIKIEREDV 237 (280)
T ss_pred chhHHhhhccccce
Confidence 34555544444443
No 142
>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.
Probab=54.57 E-value=97 Score=26.20 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=27.0
Q ss_pred CCcccccCCcccchhHhHHHHHHHHHHHHHHHHH
Q 013331 284 SGKSLVGKQTSFKVFMVCNIVALFLSLGIVIFLV 317 (445)
Q Consensus 284 ~G~~~~~~~~~F~~F~~~n~~a~~~S~~~~~~~~ 317 (445)
.++.-+.+.++|..|+..|.++..-|+..+++-+
T Consensus 38 ~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~ 71 (149)
T PF04535_consen 38 QFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSI 71 (149)
T ss_pred ccceeecccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455567778999999999999999987766644
No 143
>KOG4783 consensus Uncharacterized conserved protein [Function unknown]
Probab=52.82 E-value=1.1e+02 Score=23.79 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhh-HHh
Q 013331 376 GFTLAIFTGLGVLLARHWLRKW-EWR 400 (445)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~-~~~ 400 (445)
+..+++.+.+++.+.+.|..|. .||
T Consensus 72 ~aVVavHvalglyiy~A~~~~sr~~k 97 (102)
T KOG4783|consen 72 CAVVAVHVALGLYIYRAIYAKSRTAK 97 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcccc
Confidence 3467888899999999998644 344
No 144
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=52.46 E-value=5.6 Score=40.98 Aligned_cols=133 Identities=18% Similarity=0.096 Sum_probs=80.8
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHH-----------cCCHHH-HHHHHhcCCCccc
Q 013331 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAI-----------KGRINI-IDEILSLNLQSAE 87 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~-----------~G~~~i-v~~Ll~~~~~~~~ 87 (445)
.....+.++.+++...|....++.....+.. +....+|.+++++ .+..++ ++..++.++....
T Consensus 50 ~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~-----~~g~~~~gl~~aml~a~~~~~~P~~~a~~~~~~~~~~~~~~ll~ 124 (503)
T KOG0513|consen 50 QGVSLAYLELRLQNIDGDPSAARLADYFDVS-----IAGTNTGGLITAMLFAPNDCGRPRFGATDILWKFNLEKAPKLLE 124 (503)
T ss_pred hhhhhcccHHHHHhccCChHhhHhhhccCce-----eeccCCchhhhhhhhccccccCccccccchhhhhhhcCCCcccc
Confidence 3455678899999999998877766655442 1123344444333 333445 5555666655444
Q ss_pred ccc------ccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013331 88 MRT------IHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 88 ~~~------~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
..+ ....+++|..+.....+.+..++.. ....+.++.+|+|+||++...++. .. -+...+-+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~---~~~~~~~~~~g~t~L~~tl~~~~~--~~-------~i~~ldl~ 192 (503)
T KOG0513|consen 125 KFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTK---YEIADAREVLGNTKLHLTLTKENL--LV-------VIPCLDLK 192 (503)
T ss_pred ccccccccccccccceeeeecCccccceeecccc---cccchhhhhcCCceeeeeccCCCc--ce-------EEEeeccC
Confidence 332 4466788888877777777666543 334455677999999999887665 11 12233444
Q ss_pred CCCHHHHH
Q 013331 162 GYTALDVV 169 (445)
Q Consensus 162 G~Tpl~~a 169 (445)
+.+|+++.
T Consensus 193 ~~~P~lf~ 200 (503)
T KOG0513|consen 193 SLTPNLFS 200 (503)
T ss_pred cCCceeee
Confidence 46776663
No 145
>KOG2417 consensus Predicted G-protein coupled receptor [Signal transduction mechanisms]
Probab=52.29 E-value=1e+02 Score=29.99 Aligned_cols=62 Identities=19% Similarity=0.161 Sum_probs=36.6
Q ss_pred cccchhHhHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013331 293 TSFKVFMVCNIVALFLSLGIVIFLVSIIPFQRKSMMQLLVVTHRVMWLSVSFLAAAYIAAIW 354 (445)
Q Consensus 293 ~~F~~F~~~n~~a~~~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~si~~m~~af~~~~~ 354 (445)
.+.-.|+++-+.||.+|+.-.++|-.+....+.+........+.++.+-+..|+--|.+.+.
T Consensus 39 ~~~Vq~Ifs~tfa~sc~lfeliifeii~vl~~~sr~~~w~~~l~~ill~lv~~ip~Y~~y~i 100 (462)
T KOG2417|consen 39 NRVVQFIFSVTFAFSCSLFELIIFEIIDVLSPESRMFCWKVCLSLILLTLVFMIPYYHCYLI 100 (462)
T ss_pred hhheeeehhHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHhHHHHHHHHHHHHHHHhheee
Confidence 34456888999999999876666543322222233333334444555666667777766553
No 146
>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins.
Probab=52.25 E-value=41 Score=27.48 Aligned_cols=37 Identities=22% Similarity=0.234 Sum_probs=24.6
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhHHhh
Q 013331 365 WVSAAVVSLGGGFTLAIFTGLGVLLARHWLRKWEWRK 401 (445)
Q Consensus 365 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (445)
|...++.++.+-++.+.|+.+.++.+.+|+++.++-+
T Consensus 16 p~~~~~~~~lGN~l~vp~i~~~~~~i~~~l~~~~~~~ 52 (121)
T PF06695_consen 16 PWEAFLLAFLGNILPVPFILLFLDKILKWLKRKPWLK 52 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 4444455555566677788888888888887765433
No 147
>PRK09546 zntB zinc transporter; Reviewed
Probab=51.33 E-value=39 Score=32.81 Aligned_cols=19 Identities=11% Similarity=0.541 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 013331 337 VMWLSVSFLAAAYIAAIWT 355 (445)
Q Consensus 337 ~l~~si~~m~~af~~~~~~ 355 (445)
+.++++.+|-.+|++|+|=
T Consensus 267 Ltilt~IflPlT~IaGiyG 285 (324)
T PRK09546 267 MSLMAMVFLPTTFLTGLFG 285 (324)
T ss_pred HHHHHHHHHHHHHHHhhhc
Confidence 4456788889999999994
No 148
>PF10966 DUF2768: Protein of unknown function (DUF2768); InterPro: IPR020076 This entry contains proteins with no known function.
Probab=50.79 E-value=21 Score=24.91 Aligned_cols=21 Identities=24% Similarity=0.600 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcc
Q 013331 338 MWLSVSFLAAAYIAAIWTILP 358 (445)
Q Consensus 338 l~~si~~m~~af~~~~~~v~~ 358 (445)
||+|..+|..=|++.....+.
T Consensus 2 MWiS~~~iglMfisv~~i~~s 22 (58)
T PF10966_consen 2 MWISFGAIGLMFISVILIYFS 22 (58)
T ss_pred cchHHHHHHHHHHHHHHHHHH
Confidence 566666666666666655553
No 149
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=49.68 E-value=1e+02 Score=28.10 Aligned_cols=31 Identities=16% Similarity=0.198 Sum_probs=16.5
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh
Q 013331 364 VWVSAAVVSLGGGFTLAIFTGLGVLLARHWLRKW 397 (445)
Q Consensus 364 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (445)
.|..+..++++ +..+|...+|-.+..|+|+.
T Consensus 197 ~~~~lwyi~Y~---vPY~~~ig~~i~l~~~~~~~ 227 (230)
T PF03904_consen 197 FWTYLWYIAYL---VPYIFAIGLFIYLYEWIRAK 227 (230)
T ss_pred HHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHH
Confidence 45544444444 23444445555667787764
No 150
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=48.60 E-value=5.8 Score=37.01 Aligned_cols=11 Identities=27% Similarity=0.670 Sum_probs=0.0
Q ss_pred HhccccchhhH
Q 013331 317 VSIIPFQRKSM 327 (445)
Q Consensus 317 ~~~~~~~~~~~ 327 (445)
+.|+-|+|+.+
T Consensus 67 iIImlF~RrLL 77 (381)
T PF05297_consen 67 IIIMLFKRRLL 77 (381)
T ss_dssp -----------
T ss_pred HHHHHHHHhhc
Confidence 34455666543
No 151
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=46.80 E-value=1.2e+02 Score=29.05 Aligned_cols=117 Identities=13% Similarity=0.064 Sum_probs=60.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhc----CCCCCCCCCCCCccHHHHHHHcCCHH----HHHHHHhcCCCcccccccc
Q 013331 21 KDLNGHTPLHLSCSKGHLEITRELLKL----DPDLSSLPDNEGRTPLHWAAIKGRIN----IIDEILSLNLQSAEMRTIH 92 (445)
Q Consensus 21 ~d~~G~TpLH~Aa~~g~~~iv~~LL~~----~~~~~~~~d~~G~TpLh~Aa~~G~~~----iv~~Ll~~~~~~~~~~~~~ 92 (445)
.|..|...+..+...+..+..+.+++. -.++ ..+..|...+.-.......+ +++.+.... ..-..|..
T Consensus 125 ~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l--~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~--~~L~~d~~ 200 (322)
T cd07920 125 KDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVAL--STHPYGCRVIQRCLEHCSEEQREPLLEEILEHA--LELVQDQF 200 (322)
T ss_pred hcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHH--HcCccccHHHHHHHHhCCHHHHHHHHHHHHHHH--HHHhcCCc
Confidence 466677776666666655554444431 1111 13555655555555544433 233333221 11223566
Q ss_pred CcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCc
Q 013331 93 GETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKL 141 (445)
Q Consensus 93 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~ 141 (445)
|...+..+...+..+..+.+++........-..+..|.-.+..+...+.
T Consensus 201 Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~Gs~Vve~~l~~~~ 249 (322)
T cd07920 201 GNYVVQHVLELGDPDDTSRIIEKLLGNIVQLSCHKFASNVVEKCLKHAS 249 (322)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHCC
Confidence 7777777777776655555554432111122456777777776666554
No 152
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=46.63 E-value=1.8e+02 Score=27.29 Aligned_cols=85 Identities=13% Similarity=0.302 Sum_probs=49.1
Q ss_pred HHHHHHHHHhhcccccCCCCcccCCCcccccCCcccchhHhHHHHHHHHHHHHHHHHHhccc-cc---------------
Q 013331 260 IVAVLIATVTFAAGINPPGGFNQVSGKSLVGKQTSFKVFMVCNIVALFLSLGIVIFLVSIIP-FQ--------------- 323 (445)
Q Consensus 260 vVA~LIATvtFaA~~t~PGG~~~~~G~~~~~~~~~F~~F~~~n~~a~~~S~~~~~~~~~~~~-~~--------------- 323 (445)
.+|+++|.+.|.+-|.|==.+. +|. ..|--++.|-.+ ++.|+...++ ...| +.
T Consensus 2 ~~a~~va~~~fGs~~vPvK~~~--~gD------g~~fQw~~~~~i-~~~g~~v~~~--~~~p~f~p~amlgG~lW~~gN~ 70 (254)
T PF07857_consen 2 YIACIVAVLFFGSNFVPVKKFD--TGD------GFFFQWVMCSGI-FLVGLVVNLI--LGFPPFYPWAMLGGALWATGNI 70 (254)
T ss_pred chhHHHHHHHhcccceeeEecc--CCC------cHHHHHHHHHHH-HHHHHHHHHh--cCCCcceeHHHhhhhhhhcCce
Confidence 4789999999999998876553 332 223233333333 3333322221 1111 11
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013331 324 -RKSMMQLLVVTHRVMWLSVSFLAAAYIAAIWT 355 (445)
Q Consensus 324 -~~~~~~~l~~~~~~l~~si~~m~~af~~~~~~ 355 (445)
--+..+.+.+|+..+.=+...+++.|+.|-|-
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfG 103 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFG 103 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhce
Confidence 02445666777777777778899999998763
No 153
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=44.59 E-value=2.3e+02 Score=25.39 Aligned_cols=17 Identities=12% Similarity=0.045 Sum_probs=7.6
Q ss_pred hHHHHHHHHHHhhcccc
Q 013331 258 IIIVAVLIATVTFAAGI 274 (445)
Q Consensus 258 ~lvVA~LIATvtFaA~~ 274 (445)
..+..+|+...-|+.-+
T Consensus 81 ~~ld~~L~~~~if~~~~ 97 (206)
T PF06570_consen 81 MALDNSLLFFGIFSLLF 97 (206)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444455444444333
No 154
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=43.80 E-value=1.3e+02 Score=28.92 Aligned_cols=151 Identities=13% Similarity=0.011 Sum_probs=68.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhc--CCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCC--CccccccccCcch
Q 013331 21 KDLNGHTPLHLSCSKGHLEITRELLKL--DPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNL--QSAEMRTIHGETV 96 (445)
Q Consensus 21 ~d~~G~TpLH~Aa~~g~~~iv~~LL~~--~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~--~~~~~~~~~g~t~ 96 (445)
.|..|.-.+-.+...+..+-...+++. +.-.....|..|...+..+...+..+..+.+++.-. ...-..+..|...
T Consensus 89 ~~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G~~v 168 (322)
T cd07920 89 LDMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVALSTHPYGCRV 168 (322)
T ss_pred ccchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCccccHH
Confidence 455555555555555543333333321 111111246667766666666665554444443210 0111224456656
Q ss_pred HhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhc---CCCccccccCCCCHHHHHhh
Q 013331 97 LHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKL---GVDVNAINRKGYTALDVVES 171 (445)
Q Consensus 97 Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~---g~~~~~~n~~G~Tpl~~a~~ 171 (445)
+.-.......+..+.+++........-..|..|+..+..+...+..+..+.+++. ....-..++.|...++.+..
T Consensus 169 vq~~l~~~~~~~~~~l~~~l~~~~~~L~~d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~Gs~Vve~~l~ 246 (322)
T cd07920 169 IQRCLEHCSEEQREPLLEEILEHALELVQDQFGNYVVQHVLELGDPDDTSRIIEKLLGNIVQLSCHKFASNVVEKCLK 246 (322)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHH
Confidence 5555555444433333332211111223577888888887777765544444321 11111345555555544433
No 155
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=43.75 E-value=1.9e+02 Score=28.03 Aligned_cols=14 Identities=7% Similarity=-0.256 Sum_probs=6.0
Q ss_pred HHHHHHHHHHhhhH
Q 013331 385 LGVLLARHWLRKWE 398 (445)
Q Consensus 385 ~~~~~~~~~~~~~~ 398 (445)
+.-..+.+.+...+
T Consensus 288 ~igeyi~~i~~~~~ 301 (325)
T PRK10714 288 LLGEYIGRIYNDVR 301 (325)
T ss_pred HHHHHHHHHHHHhc
Confidence 33344444444433
No 156
>PTZ00370 STEVOR; Provisional
Probab=42.81 E-value=11 Score=35.31 Aligned_cols=22 Identities=14% Similarity=0.128 Sum_probs=15.4
Q ss_pred hccchhHHHHHHHHHHhhcccc
Q 013331 253 NARKTIIIVAVLIATVTFAAGI 274 (445)
Q Consensus 253 ~t~~s~lvVA~LIATvtFaA~~ 274 (445)
..--+|+|.+++...+..+||=
T Consensus 174 ~gi~~CsVGSafLT~IGLaAAK 195 (296)
T PTZ00370 174 GGICSCSLGSALLTLIGLAAAK 195 (296)
T ss_pred CeeEeeccHHHHHHHHHHHHHH
Confidence 3455689999888877666553
No 157
>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated
Probab=42.67 E-value=2.6e+02 Score=29.94 Aligned_cols=14 Identities=14% Similarity=0.313 Sum_probs=11.4
Q ss_pred HHHHHHHHHHhhcc
Q 013331 259 IIVAVLIATVTFAA 272 (445)
Q Consensus 259 lvVA~LIATvtFaA 272 (445)
+.+++.+|++..++
T Consensus 211 Sy~~sivaamilg~ 224 (666)
T PRK00733 211 SYAVTIVAAMVLGA 224 (666)
T ss_pred HHHHHHHHHHHHhh
Confidence 56888888888887
No 158
>PF04304 DUF454: Protein of unknown function (DUF454); InterPro: IPR007401 This is a predicted membrane protein.
Probab=41.42 E-value=76 Score=22.93 Aligned_cols=21 Identities=5% Similarity=0.072 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHhhccC
Q 013331 339 WLSVSFLAAAYIAAIWTILPR 359 (445)
Q Consensus 339 ~~si~~m~~af~~~~~~v~~~ 359 (445)
+.++.+|.+.+..+.+.+.|+
T Consensus 30 ~~a~~~m~~~~~~s~~~~~~~ 50 (71)
T PF04304_consen 30 IRALLMMWLSMGISAFFFVPN 50 (71)
T ss_pred HHHHHHHHHHHHHHHHHHccH
Confidence 346666777777775556554
No 159
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=41.21 E-value=55 Score=28.67 Aligned_cols=29 Identities=24% Similarity=0.252 Sum_probs=21.2
Q ss_pred chhHhHHHHHHHHHHHHHHHH-Hhccccch
Q 013331 296 KVFMVCNIVALFLSLGIVIFL-VSIIPFQR 324 (445)
Q Consensus 296 ~~F~~~n~~a~~~S~~~~~~~-~~~~~~~~ 324 (445)
.-|.++|.+|..+-+.+|..- ..|+-+|+
T Consensus 38 ~eY~vsNiisv~Sgll~I~~GI~AIvlSrn 67 (188)
T PF12304_consen 38 LEYAVSNIISVTSGLLSIICGIVAIVLSRN 67 (188)
T ss_pred ehhhHHHHHHHHHHHHHHHHhHHHHhhhcc
Confidence 358899999999888777663 44666664
No 160
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=40.41 E-value=1.5e+02 Score=31.03 Aligned_cols=20 Identities=10% Similarity=0.323 Sum_probs=16.2
Q ss_pred cchhHHHHHHHHHHhhcccc
Q 013331 255 RKTIIIVAVLIATVTFAAGI 274 (445)
Q Consensus 255 ~~s~lvVA~LIATvtFaA~~ 274 (445)
-|.++.+++++.++.|...-
T Consensus 331 vNw~L~i~~i~vvl~F~~S~ 350 (534)
T PF02705_consen 331 VNWLLMIGVIAVVLGFRSSS 350 (534)
T ss_pred HHHHHHHHHHhhheEECChH
Confidence 46689999999999997543
No 161
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=39.76 E-value=1.8e+02 Score=31.71 Aligned_cols=13 Identities=31% Similarity=0.539 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHH
Q 013331 340 LSVSFLAAAYIAA 352 (445)
Q Consensus 340 ~si~~m~~af~~~ 352 (445)
++|+++++|+.+-
T Consensus 75 ~~~~~~~~~~~~d 87 (697)
T PF09726_consen 75 FSVFFVCIAFTSD 87 (697)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444443
No 162
>PRK02509 hypothetical protein; Provisional
Probab=39.18 E-value=3.9e+02 Score=30.13 Aligned_cols=38 Identities=21% Similarity=0.377 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHhhcccccCCCCcccC-----------CCcccccCCcccchh
Q 013331 258 IIIVAVLIATVTFAAGINPPGGFNQV-----------SGKSLVGKQTSFKVF 298 (445)
Q Consensus 258 ~lvVA~LIATvtFaA~~t~PGG~~~~-----------~G~~~~~~~~~F~~F 298 (445)
++++..++.++.+++.++ |.|.. ...|++++...|-+|
T Consensus 187 ~~~~i~~~~sl~~g~~~~---~~W~~~l~f~n~~~Fg~~DP~Fg~DisFYvF 235 (973)
T PRK02509 187 LLRGIAIILSLAFGLILS---GNWARVLQYFHSTPFNETDPLFGRDISFYIF 235 (973)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHhCCCCCCCCCCCCCCCcEEEEE
Confidence 444445555555544432 34543 346899988887766
No 163
>PF11143 DUF2919: Protein of unknown function (DUF2919); InterPro: IPR021318 This bacterial family of proteins has no known function. Some members are annotated as YfeZ however this cannot be confirmed.
Probab=38.96 E-value=2.5e+02 Score=23.95 Aligned_cols=13 Identities=15% Similarity=0.365 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHH
Q 013331 304 VALFLSLGIVIFL 316 (445)
Q Consensus 304 ~a~~~S~~~~~~~ 316 (445)
+|+..++-+++++
T Consensus 58 lgL~~g~Pall~~ 70 (149)
T PF11143_consen 58 LGLAAGLPALLLM 70 (149)
T ss_pred HHHHHhHHHHHHH
Confidence 3455555555444
No 164
>PF07344 Amastin: Amastin surface glycoprotein; InterPro: IPR009944 This family contains the eukaryotic surface glycoprotein amastin (approximately 180 residues long).In Trypanosoma cruzi, amastin is particularly abundant during the amastigote stage.
Probab=37.95 E-value=2.2e+02 Score=24.25 Aligned_cols=39 Identities=13% Similarity=0.270 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHH
Q 013331 331 LVVTHRVMWLSVSFLAAAYIAAIWTILPRGRGMVWVSAAV 370 (445)
Q Consensus 331 l~~~~~~l~~si~~m~~af~~~~~~v~~~~~~~~w~~~~~ 370 (445)
+..+..+..+|+....+||..|+..+.- .+..+|+...+
T Consensus 62 f~aa~afaIisi~~~~~a~v~g~~~l~~-~~~~r~v~l~L 100 (155)
T PF07344_consen 62 FRAAQAFAIISIFVYGAAFVLGVLLLCC-CSCLRWVCLVL 100 (155)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHH
Confidence 3344456666666666777777665552 13445655443
No 165
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=37.57 E-value=2e+02 Score=22.45 Aligned_cols=43 Identities=23% Similarity=0.310 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHH-HhhccCCCCchHHHHHHHHHhhhHHHHH
Q 013331 339 WLSVSFLAAAYIAAI-WTILPRGRGMVWVSAAVVSLGGGFTLAI 381 (445)
Q Consensus 339 ~~si~~m~~af~~~~-~~v~~~~~~~~w~~~~~~~~~~~~~~~~ 381 (445)
.+.+.-+++||.+-- |+.+|...+..-..+..+.+|.+|++..
T Consensus 16 ~lG~~LLv~a~Lsin~~l~LP~~l~~~~aai~MIf~Gi~lMlPA 59 (96)
T PF07214_consen 16 VLGMILLVLAYLSINDYLSLPAPLSTPTAAIAMIFVGIGLMLPA 59 (96)
T ss_pred HHHHHHHHHHHHHHcccccCcccccCchHHHHHHHHHHHHHHHH
Confidence 345566667775533 3567754444444444444444444443
No 166
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=37.33 E-value=1e+02 Score=22.29 Aligned_cols=26 Identities=12% Similarity=0.029 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHhhccCCCCchHHHHH
Q 013331 344 FLAAAYIAAIWTILPRGRGMVWVSAA 369 (445)
Q Consensus 344 ~m~~af~~~~~~v~~~~~~~~w~~~~ 369 (445)
+.....+.+++-++......+|..|-
T Consensus 12 tSag~~~~wl~~lld~~sp~qW~aIG 37 (68)
T PF04971_consen 12 TSAGSAGYWLLQLLDQFSPSQWAAIG 37 (68)
T ss_pred cchhhHHHHHHHHHhccCcccchhHH
Confidence 33344444443334333334687653
No 167
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=37.03 E-value=2.4 Score=43.61 Aligned_cols=100 Identities=18% Similarity=0.133 Sum_probs=50.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHc
Q 013331 24 NGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKN 103 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 103 (445)
.+.+.+|++-..++. ..|+..+.+.+. ...+..++++........+++..++. .+.....+..+|.|+||.+...
T Consensus 105 ~~a~~~~~~~~~~~~---~~ll~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~l~-~~~~~~~~~~~g~t~L~~tl~~ 179 (503)
T KOG0513|consen 105 FGATDILWKFNLEKA---PKLLEKFDDPNF-IKGDLNLALRILVSGDKYSGAEVLLT-KYEIADAREVLGNTKLHLTLTK 179 (503)
T ss_pred ccccchhhhhhhcCC---Cccccccccccc-cccccccceeeeecCccccceeeccc-ccccchhhhhcCCceeeeeccC
Confidence 455555555433322 233333333321 22344566666666666666665555 3344455555677777776666
Q ss_pred CCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCC
Q 013331 104 NQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGK 140 (445)
Q Consensus 104 g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~ 140 (445)
++. + ..+.+.|-++.+|+|......
T Consensus 180 ~~~-----~-------~~i~~ldl~~~~P~lf~~~~~ 204 (503)
T KOG0513|consen 180 ENL-----L-------VVIPCLDLKSLTPNLFSIYDA 204 (503)
T ss_pred CCc-----c-------eEEEeeccCcCCceeeeeecc
Confidence 554 1 012334445566666555444
No 168
>COG4280 Predicted membrane protein [Function unknown]
Probab=36.78 E-value=1.4e+02 Score=26.69 Aligned_cols=24 Identities=13% Similarity=0.148 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHhhhHHhhhh
Q 013331 380 AIFTGLGVLLARHWLRKWEWRKMK 403 (445)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~ 403 (445)
++.+.++++.+|...|+..-+|++
T Consensus 72 vLLllFG~rw~Rsavrr~ag~rkg 95 (236)
T COG4280 72 VLLLLFGYRWIRSAVRRFAGIRKG 95 (236)
T ss_pred HHHHHHHHHHHHHHHHHHhchhcc
Confidence 556668889999888888744433
No 169
>PLN00151 potassium transporter; Provisional
Probab=36.59 E-value=1.5e+02 Score=32.52 Aligned_cols=22 Identities=14% Similarity=0.228 Sum_probs=17.3
Q ss_pred cchhHHHHHHHHHHhhcccccC
Q 013331 255 RKTIIIVAVLIATVTFAAGINP 276 (445)
Q Consensus 255 ~~s~lvVA~LIATvtFaA~~t~ 276 (445)
-|.++.+++++.|+.|...-.+
T Consensus 474 vNw~Lmv~~i~v~l~F~~s~~l 495 (852)
T PLN00151 474 INWFLLVMCLVVVCSFRSITDI 495 (852)
T ss_pred HHHHHHHHHHhheeeecCHHHH
Confidence 4668999999999999765544
No 170
>PLN00148 potassium transporter; Provisional
Probab=36.07 E-value=1.9e+02 Score=31.62 Aligned_cols=22 Identities=18% Similarity=0.194 Sum_probs=17.8
Q ss_pred cchhHHHHHHHHHHhhcccccC
Q 013331 255 RKTIIIVAVLIATVTFAAGINP 276 (445)
Q Consensus 255 ~~s~lvVA~LIATvtFaA~~t~ 276 (445)
-|.++.+++++.|+.|...-.+
T Consensus 397 vNw~Lmv~~i~vv~~F~~s~~l 418 (785)
T PLN00148 397 INWILMILTLAVTIGFRDTTLI 418 (785)
T ss_pred HHHHHHHHHHHhheeeccchhH
Confidence 4668999999999999865544
No 171
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=36.06 E-value=33 Score=32.31 Aligned_cols=126 Identities=15% Similarity=0.152 Sum_probs=0.0
Q ss_pred hHHHHHHhHHHHHhccchhHHHHHHHHHHhhcccc-----cCCCCcccCCCcccccCCcccchhHhHHHHHHHHHHHHHH
Q 013331 240 REKQIELQTEGLRNARKTIIIVAVLIATVTFAAGI-----NPPGGFNQVSGKSLVGKQTSFKVFMVCNIVALFLSLGIVI 314 (445)
Q Consensus 240 ~~~~~e~~~e~lk~t~~s~lvVA~LIATvtFaA~~-----t~PGG~~~~~G~~~~~~~~~F~~F~~~n~~a~~~S~~~~~ 314 (445)
+++..+.-+..=...--+|+|.++|...+..+||= .+.+.|....=+.-...-..|..|.-+...+-+-+...+.
T Consensus 161 ~DkYLkhLK~rC~~gi~~CsvGSA~LT~IGLaAAKaAAiaai~~sy~~~a~k~C~SSIsIfNMF~~sSm~sAiqag~~c~ 240 (295)
T TIGR01478 161 HDNYLKNLKKGCTAGVGTCALSSALLGNIGIAAAKTAAIEVITGSYSLDIANKCTKALAGINFFFSSSIESAGKTGVGIF 240 (295)
T ss_pred chHHHHhhhccCCCeeEeeccHHHHHHHHHHHHHHHHHHHHhhcccchhHHhhhhhhhhhhcccChHHHHHHHHhcccee
Q ss_pred HHHhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 013331 315 FLVSIIPFQRKSMMQLLVVTHRVMWLSVSFLAAAYIAAIWTILPRGRGMVWVSAAVVSLGGGFTLAIFTGLGVLLARHWL 394 (445)
Q Consensus 315 ~~~~~~~~~~~~~~~~l~~~~~~l~~si~~m~~af~~~~~~v~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (445)
...+ .++..+++++.|. +.|-+ +.++...+++++++.|+++|.+++=
T Consensus 241 ~~aS----------------------DlagtAAtaA~aa--F~Pcg---------iaalvllil~vvliiLYiWlyrrRK 287 (295)
T TIGR01478 241 YGAS----------------------DDAERAASAATST--FLPYG---------IAALVLIILTVVLIILYIWLYRRRK 287 (295)
T ss_pred eecc----------------------cccchHHHHHHHh--hcccH---------HHHHHHHHHHHHHHHHHHHHHHhhc
Q ss_pred hhhH
Q 013331 395 RKWE 398 (445)
Q Consensus 395 ~~~~ 398 (445)
+.|+
T Consensus 288 ~swk 291 (295)
T TIGR01478 288 KSWK 291 (295)
T ss_pred cccc
No 172
>PF06687 SUR7: SUR7/PalI family; InterPro: IPR009571 This family consists of several fungal-specific SUR7 proteins. Its activity regulates expression of RVS161, a homologue of human endophilin, suggesting a function for both in endocytosis [, ]. The protein carries four transmembrane domains and is thus likely to act as an anchoring protein for the eisosome to the plasma membrane. Eisosomes are the immobile protein complexes, that include the proteins Pil1 and Lsp1, which co-localise with sites of protein and lipid endocytosis at the plasma membrane. SUR7 protein may play a role in sporulation []. Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This family also includes PalI which is part of a pH signal transduction cascade. Based on the similarity of PalI to the yeast Rim9 meiotic signal transduction component it has been suggested that PalI might be a membrane sensor for ambient pH [].
Probab=35.57 E-value=1.7e+02 Score=26.08 Aligned_cols=16 Identities=38% Similarity=0.285 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHh
Q 013331 340 LSVSFLAAAYIAAIWT 355 (445)
Q Consensus 340 ~si~~m~~af~~~~~~ 355 (445)
++..+++++++..+.+
T Consensus 159 ~a~~~~lva~~i~t~~ 174 (212)
T PF06687_consen 159 LAFIFLLVAAIIATAL 174 (212)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444433
No 173
>PLN00149 potassium transporter; Provisional
Probab=35.20 E-value=1.6e+02 Score=32.22 Aligned_cols=22 Identities=18% Similarity=0.141 Sum_probs=17.4
Q ss_pred cchhHHHHHHHHHHhhcccccC
Q 013331 255 RKTIIIVAVLIATVTFAAGINP 276 (445)
Q Consensus 255 ~~s~lvVA~LIATvtFaA~~t~ 276 (445)
-|.++.+++++.|+.|...-.+
T Consensus 401 vNw~Lmv~~i~vv~~F~~s~~l 422 (779)
T PLN00149 401 INWTLMLLCLAVTVGFRDTKRL 422 (779)
T ss_pred HHHHHHHHHHhheeEecChHHH
Confidence 4668999999999999755444
No 174
>PF13903 Claudin_2: PMP-22/EMP/MP20/Claudin tight junction
Probab=35.18 E-value=2.7e+02 Score=23.41 Aligned_cols=26 Identities=19% Similarity=0.252 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCC
Q 013331 335 HRVMWLSVSFLAAAYIAAIWTILPRG 360 (445)
Q Consensus 335 ~~~l~~si~~m~~af~~~~~~v~~~~ 360 (445)
..++.+|+..+.+++..+++....+.
T Consensus 72 ~~~~~l~~~~~~~a~~~~~~~~~~~~ 97 (172)
T PF13903_consen 72 IAFLILGLLLLLFAFVFALIGFCKRS 97 (172)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 33667788888888888877666443
No 175
>PRK00068 hypothetical protein; Validated
Probab=34.61 E-value=6.4e+02 Score=28.58 Aligned_cols=14 Identities=36% Similarity=0.522 Sum_probs=11.1
Q ss_pred CcccccCCcccchh
Q 013331 285 GKSLVGKQTSFKVF 298 (445)
Q Consensus 285 G~~~~~~~~~F~~F 298 (445)
-.|++++...|-+|
T Consensus 148 ~DP~Fg~DigFY~F 161 (970)
T PRK00068 148 KDPQFGKDLSFYAF 161 (970)
T ss_pred CCCCCCCcceEEEE
Confidence 46899988887776
No 176
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=34.45 E-value=4e+02 Score=25.13 Aligned_cols=20 Identities=20% Similarity=0.338 Sum_probs=8.1
Q ss_pred hHHHHHHHHHhhhHHHHHHH
Q 013331 364 VWVSAAVVSLGGGFTLAIFT 383 (445)
Q Consensus 364 ~w~~~~~~~~~~~~~~~~~~ 383 (445)
.|..-+.+.++|++...++.
T Consensus 70 ~~~~~~~l~~~Gglwy~~ls 89 (284)
T PF12805_consen 70 EALEHALLFLAGGLWYLLLS 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34443344444344434333
No 177
>PF03229 Alpha_GJ: Alphavirus glycoprotein J; InterPro: IPR004913 The exact function of the herpesvirus glycoprotein J is unknown, but it appears to play a role in the inhibition of apotosis of the host cell [].; GO: 0019050 suppression by virus of host apoptosis
Probab=34.18 E-value=73 Score=25.59 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=17.9
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHhhhHHhhh
Q 013331 371 VSLGGGFTLAIFTGLGVLLARHWLRKWEWRKM 402 (445)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (445)
.+|++.|.+.+-..-...|+++.+|+...|++
T Consensus 88 ~VIGGLcaL~LaamGA~~LLrR~cRr~arrR~ 119 (126)
T PF03229_consen 88 LVIGGLCALTLAAMGAGALLRRCCRRAARRRQ 119 (126)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 44555444444444556777777777444433
No 178
>KOG4684 consensus Uncharacterized conserved protein, contains C4-type Zn-finger [General function prediction only]
Probab=34.02 E-value=2.3e+02 Score=25.52 Aligned_cols=36 Identities=11% Similarity=0.054 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHh
Q 013331 337 VMWLSVSFLAAAYIAAIWTILPRGRGMVWVSAAVVSLG 374 (445)
Q Consensus 337 ~l~~si~~m~~af~~~~~~v~~~~~~~~w~~~~~~~~~ 374 (445)
.+.++|.+..++|.+ |-+.|..-++.+...++..+.
T Consensus 217 al~~avta~~lt~gT--~s~a~~~gg~yf~~~fv~~~~ 252 (275)
T KOG4684|consen 217 ALTVAVTAVILTMGT--ASVAPVFGGSYFFNNFVGKYK 252 (275)
T ss_pred HHHHHHHHHHHHhhh--hhhccccchhHHHHHHHHHHH
Confidence 445566666666655 556665555544444443333
No 179
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=33.74 E-value=1.7e+02 Score=31.56 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=18.6
Q ss_pred ccchhHHHHHHHHHHhhcccccCC
Q 013331 254 ARKTIIIVAVLIATVTFAAGINPP 277 (445)
Q Consensus 254 t~~s~lvVA~LIATvtFaA~~t~P 277 (445)
.-|.++.+++++.++.|...-++-
T Consensus 367 ~vNw~Lmv~~i~vvl~F~~S~~la 390 (688)
T TIGR00794 367 FVNWLLMLGVIAVTAGFRDTNNLG 390 (688)
T ss_pred HHHHHHHHHHHheeEEecChHHHH
Confidence 346689999999999997765553
No 180
>PLN00150 potassium ion transporter family protein; Provisional
Probab=33.29 E-value=1.5e+02 Score=32.40 Aligned_cols=22 Identities=23% Similarity=0.209 Sum_probs=17.6
Q ss_pred cchhHHHHHHHHHHhhcccccC
Q 013331 255 RKTIIIVAVLIATVTFAAGINP 276 (445)
Q Consensus 255 ~~s~lvVA~LIATvtFaA~~t~ 276 (445)
-|.++.+++++.|+.|...-++
T Consensus 414 vNw~Lmv~~i~vv~~F~~s~~l 435 (779)
T PLN00150 414 INWILMVLCLVITAGFRDTDEI 435 (779)
T ss_pred HHHHHHHHHHhheEEecChHHH
Confidence 4668999999999999765544
No 181
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=33.07 E-value=6.7e+02 Score=27.28 Aligned_cols=24 Identities=21% Similarity=0.364 Sum_probs=18.7
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhcc
Q 013331 297 VFMVCNIVALFLSLGIVIFLVSII 320 (445)
Q Consensus 297 ~F~~~n~~a~~~S~~~~~~~~~~~ 320 (445)
=|++-|.+.+|+.++++..++..-
T Consensus 169 r~ILLDs~Llff~~~~~y~~~r~~ 192 (723)
T KOG3359|consen 169 RFILLDSMLLFFMAAAVYCFVRFY 192 (723)
T ss_pred hHHHHhHHHHHHHHHHHHHHHHHH
Confidence 488899999998888887776443
No 182
>PF01708 Gemini_mov: Geminivirus putative movement protein ; InterPro: IPR002621 This family consists of putative movement proteins from Maize streak virus and Wheat dwarf virus [].; GO: 0046740 spread of virus in host, cell to cell, 0016021 integral to membrane
Probab=32.81 E-value=16 Score=27.89 Aligned_cols=45 Identities=7% Similarity=0.101 Sum_probs=24.8
Q ss_pred CCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhHHhhhh
Q 013331 359 RGRGMVWVSAAVVSLGGGFTLAIFTGLGVLLARHWLRKWEWRKMK 403 (445)
Q Consensus 359 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (445)
.+.+..|.-+..+++...+-+.+++.++.++++..+-=+|.||.|
T Consensus 28 ~ss~~~ws~vv~v~i~~lvaVg~~YL~y~~fLkDlIlv~KAkrqr 72 (91)
T PF01708_consen 28 SSSGLPWSRVVEVAIFTLVAVGCLYLAYTWFLKDLILVLKAKRQR 72 (91)
T ss_pred CCCCCcceeEeeeeehHHHHHHHHHHHHHHHHHHHhheeeeccCC
Confidence 344566765544444433444555556666677766666666533
No 183
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=32.48 E-value=4.9e+02 Score=28.67 Aligned_cols=9 Identities=44% Similarity=0.615 Sum_probs=3.7
Q ss_pred cCCHHHHHH
Q 013331 69 KGRINIIDE 77 (445)
Q Consensus 69 ~G~~~iv~~ 77 (445)
+|-.++.|+
T Consensus 13 ~~~~~~~~~ 21 (742)
T TIGR01299 13 KGAKDIAKE 21 (742)
T ss_pred hhhHHHHHH
Confidence 344444443
No 184
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.85 E-value=3.5e+02 Score=23.63 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=10.2
Q ss_pred ccchhHhHHHHHHHHHHHHHHH
Q 013331 294 SFKVFMVCNIVALFLSLGIVIF 315 (445)
Q Consensus 294 ~F~~F~~~n~~a~~~S~~~~~~ 315 (445)
++..|.+|=..+.++++.+.++
T Consensus 45 R~~~F~~cl~~gv~c~~l~~~l 66 (175)
T KOG2887|consen 45 RIMGFGICLAGGVLCFLLAMVL 66 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555544444444444333
No 185
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=30.83 E-value=7.4e+02 Score=27.08 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=14.2
Q ss_pred HHHHhhccCCCCchHHHHHHHHHhhhHHHHH
Q 013331 351 AAIWTILPRGRGMVWVSAAVVSLGGGFTLAI 381 (445)
Q Consensus 351 ~~~~~v~~~~~~~~w~~~~~~~~~~~~~~~~ 381 (445)
.++|+++.......|..-+++.++|++...+
T Consensus 115 iaiytmlg~~~~~~w~~~pllll~GalwY~l 145 (704)
T TIGR01666 115 VALYTMLGYIEVNVWFIQPVMLLCGTLWYSV 145 (704)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHH
Confidence 3455555443333466444544444444333
No 186
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=30.52 E-value=4.9e+02 Score=27.05 Aligned_cols=36 Identities=19% Similarity=0.112 Sum_probs=23.0
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhHHhhh
Q 013331 365 WVSAAVVSLGGGFTLAIFTGLGVLLARHWLRKWEWRKM 402 (445)
Q Consensus 365 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (445)
|..+.++.++ +.-..|++..|.-+.+.+|+++.||+
T Consensus 339 ~~lf~~ip~a--i~d~~f~~wIF~SL~~Tlk~Lr~rRn 374 (518)
T KOG2568|consen 339 LILFAALPLA--ILDAAFIYWIFISLAKTLKKLRLRRN 374 (518)
T ss_pred hhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4434333333 45566666777778888899888763
No 187
>PF10321 7TM_GPCR_Srt: Serpentine type 7TM GPCR chemoreceptor Srt; InterPro: IPR019425 Chemoreception is mediated in Caenorhabditis elegans by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs) of proteins which are of the serpentine type []. Srt is a member of the Srg superfamily of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' [].
Probab=30.46 E-value=2.6e+02 Score=27.09 Aligned_cols=29 Identities=24% Similarity=0.299 Sum_probs=21.0
Q ss_pred cchhHHHHHHHHHHhhcccccCCCCcccC
Q 013331 255 RKTIIIVAVLIATVTFAAGINPPGGFNQV 283 (445)
Q Consensus 255 ~~s~lvVA~LIATvtFaA~~t~PGG~~~~ 283 (445)
+.+..+....+.=..|.+.||+|--++.+
T Consensus 148 ~~~~~~l~~~~iY~~y~~~fT~pv~Fns~ 176 (313)
T PF10321_consen 148 KRTYIVLFLPIIYGFYFSFFTPPVLFNSE 176 (313)
T ss_pred ceEEeeehhHHHHHHHHHHHcCcccCCCC
Confidence 44555555666667777889999999875
No 188
>PRK14740 kdbF potassium-transporting ATPase subunit F; Provisional
Probab=30.21 E-value=72 Score=18.74 Aligned_cols=15 Identities=33% Similarity=0.377 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHH
Q 013331 377 FTLAIFTGLGVLLAR 391 (445)
Q Consensus 377 ~~~~~~~~~~~~~~~ 391 (445)
+-+.+|+++.+.|++
T Consensus 11 ~a~~Lf~YLv~ALlR 25 (29)
T PRK14740 11 LATGLFVYLLVALLR 25 (29)
T ss_pred HHHHHHHHHHHHHhc
Confidence 455677777777765
No 189
>PRK12438 hypothetical protein; Provisional
Probab=30.10 E-value=8.7e+02 Score=27.65 Aligned_cols=14 Identities=29% Similarity=0.368 Sum_probs=11.0
Q ss_pred CcccccCCcccchh
Q 013331 285 GKSLVGKQTSFKVF 298 (445)
Q Consensus 285 G~~~~~~~~~F~~F 298 (445)
-.|++++...|-+|
T Consensus 150 ~DP~Fg~DigFYvF 163 (991)
T PRK12438 150 VDPEFGYDIGFYVF 163 (991)
T ss_pred CCCCCCCcceEEEE
Confidence 46899988887776
No 190
>PTZ00370 STEVOR; Provisional
Probab=29.62 E-value=2.5e+02 Score=26.68 Aligned_cols=16 Identities=19% Similarity=0.117 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHH
Q 013331 378 TLAIFTGLGVLLARHW 393 (445)
Q Consensus 378 ~~~~~~~~~~~~~~~~ 393 (445)
++++++.|+.+|.+++
T Consensus 267 l~vvliilYiwlyrrR 282 (296)
T PTZ00370 267 LAVVLIILYIWLYRRR 282 (296)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 4455666666666653
No 191
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=29.62 E-value=1.5e+02 Score=27.45 Aligned_cols=27 Identities=4% Similarity=0.212 Sum_probs=13.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013331 325 KSMMQLLVVTHRVMWLSVSFLAAAYIA 351 (445)
Q Consensus 325 ~~~~~~l~~~~~~l~~si~~m~~af~~ 351 (445)
+.-..++++++.++.+++.-|+.++..
T Consensus 196 kR~i~f~llgllfliiaigltvGT~~~ 222 (256)
T PF09788_consen 196 KRAIIFFLLGLLFLIIAIGLTVGTWTY 222 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 333344555555555555555444433
No 192
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.
Probab=29.52 E-value=29 Score=32.71 Aligned_cols=20 Identities=20% Similarity=0.516 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 013331 337 VMWLSVSFLAAAYIAAIWTI 356 (445)
Q Consensus 337 ~l~~si~~m~~af~~~~~~v 356 (445)
+.++++.+|-++|++|+|-+
T Consensus 237 LT~~t~iflPlt~i~g~fGM 256 (292)
T PF01544_consen 237 LTIVTAIFLPLTFITGIFGM 256 (292)
T ss_dssp HHHHHHHHHHHHHHTTSTTS
T ss_pred HHHHHHHHHHHHHHHHHhhC
Confidence 45567777889999999955
No 193
>KOG0847 consensus Transcription factor, contains HOX domain [Transcription]
Probab=28.76 E-value=34 Score=30.67 Aligned_cols=46 Identities=22% Similarity=0.364 Sum_probs=23.9
Q ss_pred HHHHH--hhhHHhhhhccC-CCCCCchhhHHHHHhhhc---cCCCCCCCccc
Q 013331 390 ARHWL--RKWEWRKMKEKN-RSPNSSISRVEELRMMKK---TSHESSNSDLD 435 (445)
Q Consensus 390 ~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 435 (445)
+..|| |+.+||||.+-- .+.+..+.+.-|...++. +-|++||--+|
T Consensus 211 vkVWFQNRRTKWRKkhAaEmasakkkqds~ae~~~gg~~~eeeDDeYNkPLD 262 (288)
T KOG0847|consen 211 VKVWFQNRRTKWRKKHAAEMASAKKKQDSGAERGAGGAPSEEEDDEYNKPLD 262 (288)
T ss_pred HHHHHhcchhhhhhhhccchhhccccCCCcccccccCCCccccccccCCCCC
Confidence 34444 888999987533 344444455444444433 23444654333
No 194
>COG3610 Uncharacterized conserved protein [Function unknown]
Probab=28.74 E-value=87 Score=26.93 Aligned_cols=21 Identities=38% Similarity=0.418 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhcccccCCCCc
Q 013331 260 IVAVLIATVTFAAGINPPGGF 280 (445)
Q Consensus 260 vVA~LIATvtFaA~~t~PGG~ 280 (445)
++.+.|+||.|+-.|++|.--
T Consensus 10 ~~~a~i~~v~Faivfnvp~~~ 30 (156)
T COG3610 10 MLFAFIATVGFAIVFNVPPRA 30 (156)
T ss_pred HHHHHHHHHHHHHHhcCCHHH
Confidence 678899999999999999753
No 195
>COG1380 Putative effector of murein hydrolase LrgA [General function prediction only]
Probab=28.65 E-value=3.4e+02 Score=22.47 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=14.5
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhHHhh
Q 013331 365 WVSAAVVSLGGGFTLAIFTGLGVLLARHWLRKWEWRK 401 (445)
Q Consensus 365 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (445)
|..+.+.++.+.+.+...... +.+++.|+..|+
T Consensus 89 ~~~Il~~~iiST~lv~~vtg~----~~~~l~~~~~~~ 121 (128)
T COG1380 89 GLPILVVIIISTLLVLLVTGW----VVQLLIRWQSKR 121 (128)
T ss_pred hHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHh
Confidence 555555444434444433333 444444444433
No 196
>PHA03029 hypothetical protein; Provisional
Probab=28.62 E-value=2.4e+02 Score=20.69 Aligned_cols=41 Identities=24% Similarity=0.490 Sum_probs=22.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchH
Q 013331 323 QRKSMMQLLVVTHRVMWLSVSFLAAAYIAAIWTILPRGRGMVW 365 (445)
Q Consensus 323 ~~~~~~~~l~~~~~~l~~si~~m~~af~~~~~~v~~~~~~~~w 365 (445)
|+|-+-+++.+.+.++-+|++ ..-|..+++.++.+..+..|
T Consensus 48 rrkg~ywflnf~fwllp~al~--a~fyffsiw~imnpqak~yw 88 (92)
T PHA03029 48 RRKGLYWFLNFLFWLLPFALA--AAFYFFSIWFIMNPQAKIYW 88 (92)
T ss_pred HhhhHHHHHHHHHHHHHHHHH--HHHHHHHhhheecccceeec
Confidence 445566777664444333322 23355677777766655555
No 197
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=28.46 E-value=5.3e+02 Score=27.00 Aligned_cols=21 Identities=24% Similarity=0.313 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHhhhHHh
Q 013331 380 AIFTGLGVLLARHWLRKWEWR 400 (445)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~ 400 (445)
.++..++|.+++..++|+..+
T Consensus 392 i~~~~iYy~vF~f~I~kfnlk 412 (524)
T TIGR02005 392 LCFTAIYFLVFRFLILKFNIP 412 (524)
T ss_pred HHHHHHHHHHHHHHHHHcCCC
Confidence 556667888888888888664
No 198
>PTZ00234 variable surface protein Vir12; Provisional
Probab=28.46 E-value=44 Score=33.85 Aligned_cols=14 Identities=29% Similarity=0.095 Sum_probs=8.2
Q ss_pred CCCCCCccccccCC
Q 013331 427 HESSNSDLDSSDQG 440 (445)
Q Consensus 427 ~~~~~~~~~~~~~~ 440 (445)
|.+.|+=+||-+.+
T Consensus 418 y~se~~~ldsq~~~ 431 (433)
T PTZ00234 418 YESQQSLAESQMSD 431 (433)
T ss_pred cccccccccccccc
Confidence 55556666665544
No 199
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=28.16 E-value=2.2e+02 Score=24.74 Aligned_cols=9 Identities=11% Similarity=0.250 Sum_probs=3.7
Q ss_pred HHHHHHHHH
Q 013331 301 CNIVALFLS 309 (445)
Q Consensus 301 ~n~~a~~~S 309 (445)
++.++|+..
T Consensus 94 ~sgls~~~g 102 (169)
T TIGR00267 94 IDGFSTFMG 102 (169)
T ss_pred HHHHHHHHH
Confidence 344444433
No 200
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=28.05 E-value=4e+02 Score=23.15 Aligned_cols=7 Identities=29% Similarity=0.738 Sum_probs=3.1
Q ss_pred hhhHHhh
Q 013331 395 RKWEWRK 401 (445)
Q Consensus 395 ~~~~~~~ 401 (445)
|=.+|..
T Consensus 170 ~y~kw~~ 176 (181)
T PF08006_consen 170 RYLKWNI 176 (181)
T ss_pred HHHHHHH
Confidence 3345544
No 201
>COG1295 Rbn Ribonuclease BN family enzyme [Replication, recombination, and repair]
Probab=27.94 E-value=4.1e+02 Score=25.46 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=27.4
Q ss_pred HHHHHhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 013331 313 VIFLVSIIPFQRKSMMQLLVVTHRVMWLSVSFLAAAYIAAIWTIL 357 (445)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~si~~m~~af~~~~~~v~ 357 (445)
..++...+|.+++..++.+..| .++.++......++.+.|+..
T Consensus 204 f~~ly~~lP~~~~~~~~~~~~G--a~~aai~~~i~~~~f~~Yv~~ 246 (303)
T COG1295 204 FFLLYRFLPNVRVLKWRDVLPG--ALLAAILFELGKYLFGYYLSN 246 (303)
T ss_pred HHHHHHHcCCccccchHHhhhh--HHHHHHHHHHHHHHHHHHHHH
Confidence 3334456776644444434454 666777888888888888764
No 202
>PRK13453 F0F1 ATP synthase subunit B; Provisional
Probab=27.91 E-value=1.7e+02 Score=25.51 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=14.4
Q ss_pred CchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh
Q 013331 362 GMVWVSAAVVSLGGGFTLAIFTGLGVLLARHWLRK 396 (445)
Q Consensus 362 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (445)
+..|..+++.++.++++++++..+.|+-+..++.+
T Consensus 15 ~~~~~t~~~~iInFliL~~lL~~~l~~pi~~~l~~ 49 (173)
T PRK13453 15 GVEWGTVIVTVLTFIVLLALLKKFAWGPLKDVMDK 49 (173)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44465444444443333333333334444444433
No 203
>PF11188 DUF2975: Protein of unknown function (DUF2975); InterPro: IPR021354 This family of proteins have no known function. Some members are annotated as membrane proteins however this cannot be confirmed.
Probab=27.87 E-value=3.3e+02 Score=22.04 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=20.1
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013331 321 PFQRKSMMQLLVVTHRVMWLSVSFLAAAYIAAIW 354 (445)
Q Consensus 321 ~~~~~~~~~~l~~~~~~l~~si~~m~~af~~~~~ 354 (445)
+|..+..++.-.+|..+++.++......+.....
T Consensus 55 ~Fs~~n~~~l~~ig~~~l~~~~~~~~~~~~~~~~ 88 (136)
T PF11188_consen 55 PFSPENIRRLRRIGWLLLIISILSFIANFILNYI 88 (136)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555556666667777666666665544
No 204
>KOG3144 consensus Ethanolamine-P-transferase GPI11/PIG-F, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=27.65 E-value=3.2e+02 Score=24.01 Aligned_cols=95 Identities=16% Similarity=0.251 Sum_probs=53.3
Q ss_pred CcccccCCcccchhHhHHHHHHHHHHHHHHHHHhccccchhhHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhc
Q 013331 285 GKSLVGKQTSFKVFMVCNIVALFLSLGIVIFLVSIIPFQRKSMMQLLVV-------THRVMWLSVSFLAAAYIAAIWTIL 357 (445)
Q Consensus 285 G~~~~~~~~~F~~F~~~n~~a~~~S~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~l~~si~~m~~af~~~~~~v~ 357 (445)
|.|+++ .....|++|=+++++++.=.++++.+..+...+...+++.. -..+.+-|+...+.|.+.++ +.
T Consensus 85 GAPli~--~~~~T~vlAl~lT~~t~~PtvfLl~~~~~~~~~~~~~f~s~~~~~si~e~~~k~~si~~~vGAW~ga~--vi 160 (196)
T KOG3144|consen 85 GAPLIK--DNYSTFVLALGLTFLTVFPTVFLLGSFGTWNLELWLRFLSYPGVTSIFEGLLKKNSIFIFVGAWAGAV--VI 160 (196)
T ss_pred CchHHH--HHHHHHHHHHHHHHHHhccHHHhhcccchhhHHHHHHHHhcCCCCcHhhhhHHHHHHHHHHHHHHhcc--cc
Confidence 556554 34567888989999888877777766443332222222210 01134457777888888776 55
Q ss_pred cCCCCchHHHHHHHHHhhhHHHHHHH
Q 013331 358 PRGRGMVWVSAAVVSLGGGFTLAIFT 383 (445)
Q Consensus 358 ~~~~~~~w~~~~~~~~~~~~~~~~~~ 383 (445)
|-+=+-.|-...+.++-|+.+...+.
T Consensus 161 PLDWdR~WQ~wPIp~vvGa~lGa~~g 186 (196)
T KOG3144|consen 161 PLDWDRDWQAWPIPIVVGAFLGAAVG 186 (196)
T ss_pred cCCCCCchhhCCchHHHHHHHHHHHH
Confidence 54433346555554444445544443
No 205
>PHA02650 hypothetical protein; Provisional
Probab=27.63 E-value=92 Score=23.18 Aligned_cols=22 Identities=14% Similarity=-0.070 Sum_probs=13.3
Q ss_pred HhhhHHHHHHHHHHHHHHHHHH
Q 013331 373 LGGGFTLAIFTGLGVLLARHWL 394 (445)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~ 394 (445)
+..++++++|.+++..++++.+
T Consensus 56 i~~v~i~~l~~flYLK~~~r~~ 77 (81)
T PHA02650 56 IFSLIIVALFSFFVFKGYTRNL 77 (81)
T ss_pred HHHHHHHHHHHHHHHHHhcccc
Confidence 4435566777777777665543
No 206
>PF01595 DUF21: Domain of unknown function DUF21; InterPro: IPR002550 This transmembrane region has no known function. Many of the sequences in this family are annotated as hemolysins, however this is due to a similarity to Q54318 from SWISSPROT that does not contain this domain. This domain is found in the N terminus of the proteins adjacent to two intracellular CBS domains (IPR000644 from INTERPRO).
Probab=27.31 E-value=4e+02 Score=22.85 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=13.1
Q ss_pred CCCchhhHHHHHhhhccCCC
Q 013331 409 PNSSISRVEELRMMKKTSHE 428 (445)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~ 428 (445)
......+.||+..|=+++..
T Consensus 156 ~~~~~~s~eel~~lv~~~~e 175 (183)
T PF01595_consen 156 EEDPAVSEEELRSLVEEGEE 175 (183)
T ss_pred cccCCCCHHHHHHHHHhHHH
Confidence 44555667788777776655
No 207
>TIGR02921 PEP_integral PEP-CTERM family integral membrane protein. Members of this protein family, found in three different species so far, have a PEP-CTERM sequence at the carboxyl-terminus (see model TIGR02595), but are unusual among PEP-CTERM proteins in having multiple predicted transmembrane segments. The function is unknown. It is proposed that a member of the EpsH family, to be designated exosortase (see TIGR02602), recognizes and cleaves PEP-CTERM proteins in a manner analogous to the cleavage of LPXTG proteins by sortase (see Haft, et al., 2006).
Probab=27.28 E-value=7.8e+02 Score=26.19 Aligned_cols=26 Identities=31% Similarity=0.457 Sum_probs=19.8
Q ss_pred cchhHHHHHHHHHHhhcccccCCCCccc
Q 013331 255 RKTIIIVAVLIATVTFAAGINPPGGFNQ 282 (445)
Q Consensus 255 ~~s~lvVA~LIATvtFaA~~t~PGG~~~ 282 (445)
..+..+.-.+|+-.+|++.+ =||+.+
T Consensus 106 ~~s~ili~~~i~i~a~~~~l--~~g~~s 131 (952)
T TIGR02921 106 ASSHILINIGIAIAAFAACL--FGGVAS 131 (952)
T ss_pred chhhHHHHHHHHHHHHHHHH--hhcchh
Confidence 34567788899999999876 578755
No 208
>COG3216 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.27 E-value=1.4e+02 Score=26.07 Aligned_cols=40 Identities=20% Similarity=0.110 Sum_probs=21.1
Q ss_pred hHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHhhhHHhhhh
Q 013331 364 VWVSAAV-VSLGGGFTLAIFTGLGVLLARHWLRKWEWRKMK 403 (445)
Q Consensus 364 ~w~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (445)
-|..++. +.+++....+++..+.|-+.+.++.....||++
T Consensus 134 lw~P~l~pm~vgav~~~a~~~ll~y~~~r~~v~~f~~rR~~ 174 (184)
T COG3216 134 LWGPVLKPMLVGAVPAGAIGGLLFYGLTRYSVTRFRERRRR 174 (184)
T ss_pred hcchHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3666555 334444444555555555666665555555443
No 209
>MTH00213 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=27.15 E-value=3.5e+02 Score=24.44 Aligned_cols=13 Identities=8% Similarity=0.005 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHH
Q 013331 377 FTLAIFTGLGVLL 389 (445)
Q Consensus 377 ~~~~~~~~~~~~~ 389 (445)
+...+|+.+....
T Consensus 62 aVLFLFVIMLLn~ 74 (239)
T MTH00213 62 CIIFLFVIMMIPG 74 (239)
T ss_pred HHHHHHHHHhhcc
Confidence 3444455555555
No 210
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=26.90 E-value=4.6e+02 Score=23.44 Aligned_cols=7 Identities=29% Similarity=0.354 Sum_probs=3.1
Q ss_pred HHHHHHH
Q 013331 143 TMVIYLL 149 (445)
Q Consensus 143 ~iv~~Ll 149 (445)
++...|+
T Consensus 33 eil~~Ll 39 (206)
T PF06570_consen 33 EILPHLL 39 (206)
T ss_pred HHHHHHH
Confidence 3444444
No 211
>KOG4016 consensus Synaptic vesicle protein Synaptogyrin involved in regulation of Ca2+-dependent exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=26.89 E-value=4.8e+02 Score=23.60 Aligned_cols=97 Identities=14% Similarity=0.336 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhcccccCCCCccc--CCCccc--ccCCcccchhHhHHHHHH---HHHHHHHHH-----HHhccccchhh
Q 013331 259 IIVAVLIATVTFAAGINPPGGFNQ--VSGKSL--VGKQTSFKVFMVCNIVAL---FLSLGIVIF-----LVSIIPFQRKS 326 (445)
Q Consensus 259 lvVA~LIATvtFaA~~t~PGG~~~--~~G~~~--~~~~~~F~~F~~~n~~a~---~~S~~~~~~-----~~~~~~~~~~~ 326 (445)
-+++-|..-|.|.... -+||.. +.|.+. +.++.. +=-+.+.+++ ++|+.-+++ -+|..+.|++.
T Consensus 29 R~~~~lFsliVf~si~--~eGy~n~~~~~~~~Ciynrn~~--ACsyg~avG~~Afla~~~flvlD~~f~qISsv~~Rkra 104 (233)
T KOG4016|consen 29 RVVSWLFSLIVFGSIV--NEGYLNSASSGEEFCIYNRNSN--ACSYGVAVGVLAFLACLAFLVLDVYFPQISSVKDRKRA 104 (233)
T ss_pred HHHHHHHHHhheeeec--cccccCcccCCceEEEECCCCc--chhHHHHHHHHHHHHHHHHHHHHhhhhhhcccchhHHH
Confidence 3566666777777654 366643 244432 222111 1112334444 333332222 12334444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013331 327 MMQLLVVTHRVMWLSVSFLAAAYIAAIWTILPRGR 361 (445)
Q Consensus 327 ~~~~l~~~~~~l~~si~~m~~af~~~~~~v~~~~~ 361 (445)
.++-++...+|-.+-.|..+|.+.-|-+-++..
T Consensus 105 --Vl~Dl~~SalwtflwfvGFc~l~nqwqvs~p~~ 137 (233)
T KOG4016|consen 105 --VLADLGVSALWAFLWFVGFCFLANQWQVSKPKE 137 (233)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence 345566668999999999999999998875543
No 212
>PRK15204 undecaprenyl-phosphate galactose phosphotransferase; Provisional
Probab=26.89 E-value=4.6e+02 Score=27.05 Aligned_cols=10 Identities=0% Similarity=-0.014 Sum_probs=4.9
Q ss_pred HHhhcccccC
Q 013331 267 TVTFAAGINP 276 (445)
Q Consensus 267 TvtFaA~~t~ 276 (445)
.+++.-|+..
T Consensus 26 ~~~~~~a~~~ 35 (476)
T PRK15204 26 NLALWFSLGC 35 (476)
T ss_pred HHHHHHHHHH
Confidence 4455555544
No 213
>TIGR02184 Myco_arth_vir_N Mycoplasma virulence family signal region. This model represents the N-terminal region, including a probable signal sequence or signal anchor which in most instances has four consecutive Lys residues before the hydrophobic stretch, of a family of large, virulence-associated proteins in Mycoplasma arthritidis and smaller proteins in Mycoplasma capricolum.
Probab=26.87 E-value=51 Score=20.06 Aligned_cols=22 Identities=32% Similarity=0.493 Sum_probs=16.8
Q ss_pred hccchhHHHHHHHHHHhhcccc
Q 013331 253 NARKTIIIVAVLIATVTFAAGI 274 (445)
Q Consensus 253 ~t~~s~lvVA~LIATvtFaA~~ 274 (445)
+.-=++.++++|++.++|.+.+
T Consensus 9 nkIl~~al~a~l~~S~s~g~Vi 30 (33)
T TIGR02184 9 NKIATLVIVTSLLTSLTISGVI 30 (33)
T ss_pred hheehHHHHHHHHHhheeeeEE
Confidence 3444588999999999997654
No 214
>PF06454 DUF1084: Protein of unknown function (DUF1084); InterPro: IPR009457 This entry consists of several hypothetical plant specific proteins of unknown function.
Probab=26.85 E-value=3.9e+02 Score=25.40 Aligned_cols=17 Identities=29% Similarity=0.237 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHhhhH
Q 013331 381 IFTGLGVLLARHWLRKWE 398 (445)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~ 398 (445)
.|++.+.++... +|+.+
T Consensus 179 ~Fl~YG~~L~~~-Lr~~p 195 (281)
T PF06454_consen 179 GFLYYGGKLFFK-LRRFP 195 (281)
T ss_pred HHHHHHHHHHHH-HHcCc
Confidence 344445555444 35543
No 215
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=26.85 E-value=51 Score=26.97 Aligned_cols=14 Identities=29% Similarity=0.240 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHH
Q 013331 338 MWLSVSFLAAAYIA 351 (445)
Q Consensus 338 l~~si~~m~~af~~ 351 (445)
+.+.|+...+||..
T Consensus 60 li~GvvvT~vays~ 73 (129)
T PF15099_consen 60 LIAGVVVTAVAYSF 73 (129)
T ss_pred HHHhhHhheeeEee
Confidence 33455555555554
No 216
>PF03699 UPF0182: Uncharacterised protein family (UPF0182); InterPro: IPR005372 This family contains uncharacterised integral membrane proteins.; GO: 0016021 integral to membrane
Probab=26.78 E-value=6.9e+02 Score=27.60 Aligned_cols=14 Identities=43% Similarity=0.721 Sum_probs=11.5
Q ss_pred CcccccCCcccchh
Q 013331 285 GKSLVGKQTSFKVF 298 (445)
Q Consensus 285 G~~~~~~~~~F~~F 298 (445)
-.|++++...|-+|
T Consensus 140 ~DP~Fg~Di~FYvF 153 (774)
T PF03699_consen 140 TDPIFGKDISFYVF 153 (774)
T ss_pred CCCCCCCCceeeee
Confidence 46899998888777
No 217
>PF03669 UPF0139: Uncharacterised protein family (UPF0139); InterPro: IPR005351 This is a small family of proteins of unknown function which appear to be related to the hypothetical protein CG10674 from Drosophila melanogaster (Fruit fly)(Q9VRJ8 from SWISSPROT).
Probab=26.66 E-value=3.3e+02 Score=21.60 Aligned_cols=36 Identities=11% Similarity=0.365 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013331 300 VCNIVALFLSLGIVIFLVSIIPFQRKSMMQLLVVTHRVMWLSVSFLAAAYIAA 352 (445)
Q Consensus 300 ~~n~~a~~~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~si~~m~~af~~~ 352 (445)
+.+++|++++++.+++ |.| + +-|+|+.+-+.+|+-.
T Consensus 34 y~~~L~~~~~m~gl~m-------r~K-------~---~aW~al~~s~~S~an~ 69 (103)
T PF03669_consen 34 YMSFLGMIFSMAGLMM-------RNK-------W---CAWAALFFSCQSFANM 69 (103)
T ss_pred HHHHHHHHHHHHHHHH-------HhH-------H---HHHHHHHHHHHHHHcC
Confidence 4678888888877654 221 1 5677777666666554
No 218
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=26.15 E-value=2.8e+02 Score=25.58 Aligned_cols=18 Identities=22% Similarity=0.423 Sum_probs=10.5
Q ss_pred ccchhHhHHHHHHHHHHH
Q 013331 294 SFKVFMVCNIVALFLSLG 311 (445)
Q Consensus 294 ~F~~F~~~n~~a~~~S~~ 311 (445)
+|.+=+++|-|+|+.+-+
T Consensus 166 af~vAflFnwIGFlltyc 183 (262)
T KOG4812|consen 166 AFIVAFLFNWIGFLLTYC 183 (262)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344445677777766543
No 219
>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []. It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane
Probab=25.59 E-value=3.7e+02 Score=21.90 Aligned_cols=21 Identities=14% Similarity=0.211 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 013331 337 VMWLSVSFLAAAYIAAIWTIL 357 (445)
Q Consensus 337 ~l~~si~~m~~af~~~~~~v~ 357 (445)
+.++++.++.++++++....-
T Consensus 41 lq~l~~~~~~~G~~~~~~~~~ 61 (137)
T PF03188_consen 41 LQVLALVFAIIGFVAIFINKN 61 (137)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 566788888888888876554
No 220
>PF14163 SieB: Superinfection exclusion protein B
Probab=25.59 E-value=2.9e+02 Score=23.33 Aligned_cols=8 Identities=0% Similarity=-0.018 Sum_probs=3.2
Q ss_pred HHHHHHHH
Q 013331 347 AAYIAAIW 354 (445)
Q Consensus 347 ~af~~~~~ 354 (445)
..+...+.
T Consensus 17 ~~~~~~l~ 24 (151)
T PF14163_consen 17 ESLLEWLN 24 (151)
T ss_pred HHHHHHhC
Confidence 34444433
No 221
>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=25.49 E-value=1.4e+02 Score=19.16 Aligned_cols=8 Identities=63% Similarity=1.099 Sum_probs=4.6
Q ss_pred hhhHHhhh
Q 013331 395 RKWEWRKM 402 (445)
Q Consensus 395 ~~~~~~~~ 402 (445)
||+..|||
T Consensus 31 RKw~aRkr 38 (43)
T PF08114_consen 31 RKWQARKR 38 (43)
T ss_pred HHHHHHHH
Confidence 66665553
No 222
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=25.32 E-value=6.2e+02 Score=25.46 Aligned_cols=9 Identities=44% Similarity=0.859 Sum_probs=4.8
Q ss_pred HHHHHHhhh
Q 013331 389 LARHWLRKW 397 (445)
Q Consensus 389 ~~~~~~~~~ 397 (445)
+.++|++|.
T Consensus 114 ~~~~~i~~~ 122 (415)
T TIGR00801 114 LGPRWLMKL 122 (415)
T ss_pred hhHHHHHhc
Confidence 445555555
No 223
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=24.98 E-value=7.7e+02 Score=25.37 Aligned_cols=21 Identities=24% Similarity=0.225 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHHHHHHHhcc
Q 013331 300 VCNIVALFLSLGIVIFLVSII 320 (445)
Q Consensus 300 ~~n~~a~~~S~~~~~~~~~~~ 320 (445)
+++++|.........++-++.
T Consensus 74 ~~~sis~l~~all~P~lGa~a 94 (477)
T PF11700_consen 74 YANSISGLLQALLAPFLGAIA 94 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 455666555444333333333
No 224
>COG1687 AzlD Predicted branched-chain amino acid permeases (azaleucine resistance) [Amino acid transport and metabolism]
Probab=24.90 E-value=3.5e+02 Score=21.44 Aligned_cols=60 Identities=22% Similarity=0.223 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhccccc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013331 303 IVALFLSLGIVIFLVSIIPFQ---RKSMMQLLVVTHRVMWLSVSFLAAAYIAAIWTILPRGRG 362 (445)
Q Consensus 303 ~~a~~~S~~~~~~~~~~~~~~---~~~~~~~l~~~~~~l~~si~~m~~af~~~~~~v~~~~~~ 362 (445)
.+.-..++.....++-++||- ....++.+..=-+.|=.|+..|.+.||.---.+++..++
T Consensus 5 ~~l~i~v~~v~t~~~RilPF~if~~~~ppq~v~~lgk~lP~~v~~~Lviyclk~v~~~~~~~G 67 (106)
T COG1687 5 QILTIIVIAVGTFLTRILPFLIFKSGRPPQFVGYLGKVLPASVMGMLVIYCLKDVAILLGPHG 67 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhcCHHHHHHHHHHHHccceeccCCCC
Confidence 334444444444455555532 211244444434466779999999999887766655554
No 225
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=24.83 E-value=3.7e+02 Score=21.63 Aligned_cols=19 Identities=0% Similarity=0.186 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013331 330 LLVVTHRVMWLSVSFLAAA 348 (445)
Q Consensus 330 ~l~~~~~~l~~si~~m~~a 348 (445)
.-.+++.++++++.-|.+.
T Consensus 11 ~R~~al~lif~g~~vmy~g 29 (114)
T PF11023_consen 11 IRTFALSLIFIGMIVMYIG 29 (114)
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 3356666777776666653
No 226
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.73 E-value=1.9e+02 Score=21.11 Aligned_cols=14 Identities=29% Similarity=0.325 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHhhh
Q 013331 384 GLGVLLARHWLRKW 397 (445)
Q Consensus 384 ~~~~~~~~~~~~~~ 397 (445)
.++|.+.+..+.|.
T Consensus 19 ~~G~fiark~~~k~ 32 (71)
T COG3763 19 IGGFFIARKQMKKQ 32 (71)
T ss_pred HHHHHHHHHHHHHH
Confidence 34566666655544
No 227
>PF05399 EVI2A: Ectropic viral integration site 2A protein (EVI2A); InterPro: IPR008608 This family contains several mammalian ectropic viral integration site 2A (EVI2A) proteins. The function of this protein is unknown although it is thought to be a membrane protein and may function as an oncogene in retrovirus induced myeloid tumours [, ].; GO: 0016021 integral to membrane
Probab=24.12 E-value=2.7e+02 Score=25.13 Aligned_cols=7 Identities=14% Similarity=0.064 Sum_probs=3.7
Q ss_pred HHhhhHH
Q 013331 393 WLRKWEW 399 (445)
Q Consensus 393 ~~~~~~~ 399 (445)
.+|+.++
T Consensus 160 ~LKrskQ 166 (227)
T PF05399_consen 160 SLKRSKQ 166 (227)
T ss_pred HHHHHHH
Confidence 3455555
No 228
>KOG3462 consensus Predicted membrane protein [Function unknown]
Probab=24.11 E-value=2.9e+02 Score=21.33 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=10.9
Q ss_pred hHHHHHHHHHHHHHH
Q 013331 300 VCNIVALFLSLGIVI 314 (445)
Q Consensus 300 ~~n~~a~~~S~~~~~ 314 (445)
+.|.+++++|++-+.
T Consensus 35 Ymn~lgmIfsmcGlM 49 (105)
T KOG3462|consen 35 YMNFLGMIFSMCGLM 49 (105)
T ss_pred HHHHHHHHHHHHHHH
Confidence 367788888887554
No 229
>PF15339 Afaf: Acrosome formation-associated factor
Probab=24.00 E-value=1.6e+02 Score=25.51 Aligned_cols=13 Identities=15% Similarity=0.204 Sum_probs=6.2
Q ss_pred hHHHHHHHHHHHH
Q 013331 326 SMMQLLVVTHRVM 338 (445)
Q Consensus 326 ~~~~~l~~~~~~l 338 (445)
.++.+|++|..+|
T Consensus 127 ~~KlkLmLGIsLm 139 (200)
T PF15339_consen 127 ELKLKLMLGISLM 139 (200)
T ss_pred HHHHHHHHHHHHH
Confidence 3445555554433
No 230
>smart00084 NMU Neuromedin U. Neuromedin U (NmU) is a vertebrate peptide which stimulates uterine smooth muscle contraction and causes selective vasoconstriction. Like most other active peptides, it is proteolytically processed from a larger precursor protein. The mature peptides are 8 (NmU-8) to 25 (NmU-25) residues long and C- terminally amidated. The sequence of the C-terminal extremity of NmU is extremely well conserved in mammals, birds and amphibians.
Probab=23.91 E-value=32 Score=19.47 Aligned_cols=15 Identities=20% Similarity=0.614 Sum_probs=9.5
Q ss_pred CCcccccc---CCcccCC
Q 013331 431 NSDLDSSD---QGGYHLY 445 (445)
Q Consensus 431 ~~~~~~~~---~~~~~~~ 445 (445)
|.|+|+-- .+||++|
T Consensus 4 dee~qgp~~~qsrgyFLf 21 (26)
T smart00084 4 DEEFQGPIASQSRGYFLF 21 (26)
T ss_pred cccccCccccccCceEEe
Confidence 44555543 7888876
No 231
>PF14851 FAM176: FAM176 family
Probab=23.47 E-value=1.3e+02 Score=25.66 Aligned_cols=17 Identities=24% Similarity=0.266 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHhh
Q 013331 380 AIFTGLGVLLARHWLRK 396 (445)
Q Consensus 380 ~~~~~~~~~~~~~~~~~ 396 (445)
.+++.|+..+++-.+|+
T Consensus 33 GLlLtLcllV~risc~~ 49 (153)
T PF14851_consen 33 GLLLTLCLLVIRISCRP 49 (153)
T ss_pred HHHHHHHHHHhhheeec
Confidence 34444555566666633
No 232
>PHA02132 hypothetical protein
Probab=23.28 E-value=2.7e+02 Score=20.16 Aligned_cols=21 Identities=29% Similarity=0.672 Sum_probs=15.7
Q ss_pred HHhhhhccCCCCCCchhhHHH
Q 013331 398 EWRKMKEKNRSPNSSISRVEE 418 (445)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~ 418 (445)
.||++|.|+.+|.-|-.++|-
T Consensus 33 ewr~~~pdsk~pa~sl~~vqi 53 (86)
T PHA02132 33 EWRQKRPDSKMPARSLCAVQV 53 (86)
T ss_pred HHHcCCCCccCchhhhhhhHH
Confidence 467778888888877777764
No 233
>COG5522 Predicted integral membrane protein [Function unknown]
Probab=23.25 E-value=4.8e+02 Score=23.59 Aligned_cols=86 Identities=13% Similarity=0.233 Sum_probs=44.1
Q ss_pred HHHhhcccccCCCCcccCCCcccccCCcccchhHhHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHHH
Q 013331 266 ATVTFAAGINPPGGFNQVSGKSLVGKQTSFKVFMVCNIVALFLSLGIVIFLVSIIPFQRKSMMQLLVVTHRVMWLSVSFL 345 (445)
Q Consensus 266 ATvtFaA~~t~PGG~~~~~G~~~~~~~~~F~~F~~~n~~a~~~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~si~~m 345 (445)
.+.+|.|-+||-=|+. +.|++ +|..|+++-..-|.+.+.+++. +...|..+......+++ ..+-.++.|
T Consensus 104 ig~sf~AlltPDl~~~---~~p~l----~~~lffitH~svfls~v~~~vh-freRpgksgl~~svl~~---~~lg~~~lf 172 (236)
T COG5522 104 IGISFMALLTPDLQYL---QVPWL----EFLLFFITHISVFLSAVILIVH-FRERPGKSGLVMSVLVA---ISLGIMCLF 172 (236)
T ss_pred hhHHHHHHHcCccccc---cchHH----HHHHHHHHHHHHHHHHHHHHHH-hccCCCccchhHHHHHH---HHHHHHHHH
Confidence 3458888889876653 34543 4667777665544433332222 22222222222222221 333444445
Q ss_pred HHHHHHHHHhhccCCCC
Q 013331 346 AAAYIAAIWTILPRGRG 362 (445)
Q Consensus 346 ~~af~~~~~~v~~~~~~ 362 (445)
.=.+..+-|+-+.+.++
T Consensus 173 inrrLGtNYlylsk~P~ 189 (236)
T COG5522 173 INRRLGTNYLYLSKEPE 189 (236)
T ss_pred HHHHhcCceeEeecCCC
Confidence 55787777777755443
No 234
>COG4758 Predicted membrane protein [Function unknown]
Probab=22.98 E-value=6e+02 Score=23.37 Aligned_cols=15 Identities=27% Similarity=0.323 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHH
Q 013331 378 TLAIFTGLGVLLARH 392 (445)
Q Consensus 378 ~~~~~~~~~~~~~~~ 392 (445)
+.++|.+.++.++.+
T Consensus 77 ~aii~i~~~~~~~~~ 91 (235)
T COG4758 77 LAIIFIFIGLYLIIK 91 (235)
T ss_pred HHHHHHHHHHHHHhh
Confidence 334444444444433
No 235
>PRK14585 pgaD putative PGA biosynthesis protein; Provisional
Probab=22.85 E-value=4.5e+02 Score=21.94 Aligned_cols=29 Identities=7% Similarity=0.268 Sum_probs=14.0
Q ss_pred ccchhhHHHHHHHHHH-HHHHHHHHHHHHH
Q 013331 321 PFQRKSMMQLLVVTHR-VMWLSVSFLAAAY 349 (445)
Q Consensus 321 ~~~~~~~~~~l~~~~~-~l~~si~~m~~af 349 (445)
..+++++++++-+.++ +.|+......+.+
T Consensus 7 ~T~qr~~~rliD~~~T~laW~gf~~~~~~~ 36 (137)
T PRK14585 7 TTRQSPVRLLVDYVATTILWTLFALFIFLF 36 (137)
T ss_pred eeccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666544332 3455544444333
No 236
>PF11286 DUF3087: Protein of unknown function (DUF3087); InterPro: IPR021438 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=22.40 E-value=5.2e+02 Score=22.43 Aligned_cols=19 Identities=16% Similarity=0.319 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHhhccC
Q 013331 341 SVSFLAAAYIAAIWTILPR 359 (445)
Q Consensus 341 si~~m~~af~~~~~~v~~~ 359 (445)
+.+....+|.+.+....|.
T Consensus 25 ~lai~sl~~s~llI~lFg~ 43 (165)
T PF11286_consen 25 SLAILSLAFSQLLIALFGG 43 (165)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 3334445666666655543
No 237
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=21.87 E-value=56 Score=29.09 Aligned_cols=52 Identities=25% Similarity=0.344 Sum_probs=39.8
Q ss_pred cccCcchHhHHHHcCCHHHHH-HHHHhc-CcccccCCCCCCCCcHHHHHHhCCc
Q 013331 90 TIHGETVLHLTVKNNQYEAVK-YLMETL-NITKLANMPDNDGNTILHLATAGKL 141 (445)
Q Consensus 90 ~~~g~t~Lh~A~~~g~~~~v~-~Ll~~~-~~~~~~n~~d~~g~T~LHlA~~~~~ 141 (445)
+.+-++|||-|++-++.+++- |+++.. ..+..+|..|.+|..+|.+|.....
T Consensus 219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~~ 272 (280)
T KOG4591|consen 219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCREL 272 (280)
T ss_pred cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHHH
Confidence 345688999999999988765 555542 3455788999999999999976543
No 238
>COG3201 PnuC Nicotinamide mononucleotide transporter [Coenzyme metabolism]
Probab=21.61 E-value=6.2e+02 Score=23.08 Aligned_cols=46 Identities=15% Similarity=0.177 Sum_probs=33.3
Q ss_pred cchhHHHHHHHHHHhhcccccCCCCcccCCCcccccCCcccchhHhHHHHHHHHHHHHHHHH
Q 013331 255 RKTIIIVAVLIATVTFAAGINPPGGFNQVSGKSLVGKQTSFKVFMVCNIVALFLSLGIVIFL 316 (445)
Q Consensus 255 ~~s~lvVA~LIATvtFaA~~t~PGG~~~~~G~~~~~~~~~F~~F~~~n~~a~~~S~~~~~~~ 316 (445)
.-.+.++++++-|.+|.-+++--|+-.. -..|..-|+.|+++.++.
T Consensus 115 ~w~~~lv~~ivg~l~f~~i~~a~g~~~~----------------p~~Ds~~~visivAqilm 160 (222)
T COG3201 115 GWLAVLVAGIVGTLAFVSILFALGDSVA----------------PWWDSCTFVISIVAQILM 160 (222)
T ss_pred chhhhhhHHHHHHHHHHHHHHHhcccCC----------------chHHHHHHHHHHHHHHHH
Confidence 3458899999999999988887776311 346777788887766654
No 239
>PF11084 DUF2621: Protein of unknown function (DUF2621); InterPro: IPR020203 This entry represents a group of uncharacterised proteins.
Probab=21.36 E-value=1.9e+02 Score=23.82 Aligned_cols=29 Identities=10% Similarity=0.156 Sum_probs=19.2
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHhhhHH
Q 013331 371 VSLGGGFTLAIFTGLGVLLARHWLRKWEW 399 (445)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (445)
+++.+++++.++..-+|..+|.+++++|.
T Consensus 10 I~~W~~vli~l~~IGGfFMFRKFLK~lPK 38 (141)
T PF11084_consen 10 ILFWVVVLIGLMAIGGFFMFRKFLKRLPK 38 (141)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhCCc
Confidence 34444566667777778777777777764
No 240
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=21.29 E-value=1.4e+02 Score=17.66 Aligned_cols=18 Identities=28% Similarity=0.408 Sum_probs=9.6
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 013331 374 GGGFTLAIFTGLGVLLAR 391 (445)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~ 391 (445)
++.+.+.++++|.+.|++
T Consensus 8 ~~~va~~L~vYL~~ALlr 25 (29)
T PRK14759 8 AGAVSLGLLIYLTYALLR 25 (29)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 333445566666666553
No 241
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=21.17 E-value=1.1e+03 Score=25.76 Aligned_cols=33 Identities=30% Similarity=0.562 Sum_probs=15.2
Q ss_pred HHHHHhhccCCCCchHHHHHHHHHhhhHHHHHH
Q 013331 350 IAAIWTILPRGRGMVWVSAAVVSLGGGFTLAIF 382 (445)
Q Consensus 350 ~~~~~~v~~~~~~~~w~~~~~~~~~~~~~~~~~ 382 (445)
..++|+++.++..-.|..-+++.++|++.-.++
T Consensus 114 ~~aiytml~~~~~~~w~~~pllll~GalwY~l~ 146 (701)
T TIGR01667 114 LAAIYTMLGAGEVPVWFIEPLLILAGTLWYGLL 146 (701)
T ss_pred HHHHHHHcCcccccHHHHHHHHHHHHHHHHHHH
Confidence 345566654444334654444433333433333
No 242
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=21.04 E-value=18 Score=36.98 Aligned_cols=90 Identities=26% Similarity=0.216 Sum_probs=53.0
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcC---CHHHHHHHHHhcCcccccCCCCCCCCc---
Q 013331 58 EGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNN---QYEAVKYLMETLNITKLANMPDNDGNT--- 131 (445)
Q Consensus 58 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~n~~d~~g~T--- 131 (445)
+.+||+.+|+..|..+++..++..+-+..+..-.+|.. |.++... ..|.+..|... +...+..|..|+-
T Consensus 57 ~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~~~e~~~hL~~~---k~~~~~tda~g~~~~~ 131 (528)
T KOG1595|consen 57 NQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVGDTERTYHLRYY---KTLPCVTDARGNCVKN 131 (528)
T ss_pred ccccccchhhhcCccccccceeecchhhccccCCCCcc--cchhcccccCCcceeEecccc---ccccCccccCCCcccC
Confidence 34688888888888888888776654444444445555 6555543 34444444332 5556666766664
Q ss_pred HHHHHHhCC---cHHHHHHHHhcC
Q 013331 132 ILHLATAGK---LTTMVIYLLKLG 152 (445)
Q Consensus 132 ~LHlA~~~~---~~~iv~~Ll~~g 152 (445)
.+|.|..++ .-..++.|++.+
T Consensus 132 v~~~~~~~~~~~~r~~~~~l~e~~ 155 (528)
T KOG1595|consen 132 VLHCAFAHGPNDLRPPVEDLLELQ 155 (528)
T ss_pred cccccccCCccccccHHHHHHhcc
Confidence 356665544 334555555543
No 243
>PHA02844 putative transmembrane protein; Provisional
Probab=20.89 E-value=1.1e+02 Score=22.47 Aligned_cols=28 Identities=7% Similarity=-0.317 Sum_probs=13.4
Q ss_pred chHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 013331 363 MVWVSAAVVSLGGGFTLAIFTGLGVLLAR 391 (445)
Q Consensus 363 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (445)
..|..+.+. +..++++++|..++..+++
T Consensus 46 ~~~~~~ii~-i~~v~~~~~~~flYLK~~~ 73 (75)
T PHA02844 46 SSTKIWILT-IIFVVFATFLTFLYLKAVP 73 (75)
T ss_pred hhHHHHHHH-HHHHHHHHHHHHHHHheec
Confidence 445444333 3334455556666655543
No 244
>PRK14397 membrane protein; Provisional
Probab=20.79 E-value=6.5e+02 Score=23.01 Aligned_cols=18 Identities=11% Similarity=0.196 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 013331 339 WLSVSFLAAAYIAAIWTI 356 (445)
Q Consensus 339 ~~si~~m~~af~~~~~~v 356 (445)
++|+.+++.++++.++..
T Consensus 137 ~vSL~Si~a~~~~pi~~~ 154 (222)
T PRK14397 137 FVSLGSLTLVTALPVMLL 154 (222)
T ss_pred HhhHHHHHHHHHHHHHHH
Confidence 346666666666655543
No 245
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.71 E-value=1.3e+02 Score=31.45 Aligned_cols=105 Identities=14% Similarity=0.204 Sum_probs=0.0
Q ss_pred CCcccchhHhHHHHHHHHHHHHHHHHHhccccch----------------------------------hhHHHHHHHHHH
Q 013331 291 KQTSFKVFMVCNIVALFLSLGIVIFLVSIIPFQR----------------------------------KSMMQLLVVTHR 336 (445)
Q Consensus 291 ~~~~F~~F~~~n~~a~~~S~~~~~~~~~~~~~~~----------------------------------~~~~~~l~~~~~ 336 (445)
....++.|.+.|.+-..++++.++..+-+.+.++ ..+-.++..|..
T Consensus 260 ~~~qIhWfSIiNSlvIVlfLSgiv~mI~lRtl~rDiarYne~d~~~d~~Ee~GWKLVhGDVFR~P~~~~lLsv~vGsGvQ 339 (628)
T KOG1278|consen 260 EDVQIHWFSIINSLVIVLFLSGIVAMIMLRTLYRDIARYNELDLDDDAQEESGWKLVHGDVFRPPRNSMLLSVLVGSGVQ 339 (628)
T ss_pred CCCceEEEehhhhHHHHHHHHHHHHHHHHHHHHHhHhhhccccchhhhhhhcceEEeecccccCCCCCeEEEEEeccChh
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhHHhhh
Q 013331 337 VMWLSVSFLAAAYIAAIWTILPRGRGMVWVSAAVVSLGGGFTLAIFTGLGVLLARHWLRKWEWRKM 402 (445)
Q Consensus 337 ~l~~si~~m~~af~~~~~~v~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (445)
+++++ ++.-|.|.+-.+.|.++| +.....+...++..+++...-..+...+++..||+.
T Consensus 340 ~l~M~---~vti~fA~lGflSPs~RG----sLmT~~~~l~v~~G~~agY~s~rlyk~~~g~~wk~~ 398 (628)
T KOG1278|consen 340 LLGMI---LVTIFFACLGFLSPSSRG----SLMTAMVLLFVFMGFVAGYVSARLYKTFKGREWKRN 398 (628)
T ss_pred hhHHH---HHHHHHHHhccCCccccc----cHHHHHHHHHHHHHHhhhhhhhhhHhhhcCCcchhh
No 246
>PF08733 PalH: PalH/RIM21; InterPro: IPR014844 PalH (also known as RIM21) is a transmembrane protein required for proteolytic cleavage of Rim101/PacC transcription factors which are activated by C-terminal proteolytic processing. Rim101/PacC family proteins play a key role in pH-dependent responses and PalH has been implicated as a pH sensor [].
Probab=20.41 E-value=5.9e+02 Score=25.02 Aligned_cols=22 Identities=18% Similarity=0.442 Sum_probs=13.1
Q ss_pred HHHHHHHHHHhhhHHhhhhccC
Q 013331 385 LGVLLARHWLRKWEWRKMKEKN 406 (445)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~ 406 (445)
+..-.++.|+-+...++|+.++
T Consensus 306 ~~tVivWEWi~rie~lEr~~ek 327 (348)
T PF08733_consen 306 AATVIVWEWINRIERLERKEEK 327 (348)
T ss_pred HHhhhHHHhhhHHHHHHHHHHh
Confidence 3344567777777666655433
No 247
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=20.23 E-value=2e+02 Score=29.14 Aligned_cols=68 Identities=10% Similarity=0.168 Sum_probs=38.2
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhH
Q 013331 319 IIPFQRKSMMQLLVVTHRVMWLSVSFLAAAYIAAIWTILPRGRGMVWVSAAVVSLGGGFTLAIFTGLGVLLARHWLRKWE 398 (445)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~~l~~si~~m~~af~~~~~~v~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (445)
..-+.+...+.++.+| ++..+++.++..|..+++++. ... .+-..|...+++-+.+.+-.+.
T Consensus 85 G~~sDr~npr~fm~~g--Lilsai~nil~Gfs~s~~~~~-----------~l~-----~lng~fQg~Gwpp~~~~i~~Wf 146 (448)
T COG2271 85 GVLSDRSNPRYFMAFG--LILSAIVNILFGFSPSLFLFA-----------VLW-----VLNGWFQGMGWPPCARTITHWF 146 (448)
T ss_pred hhhcccCCCceeehHH--HHHHHHHHHHHhhhhHHHHHH-----------HHH-----HHHHHHhcCCCcHHHHHHHHHc
Confidence 3344444444555554 666677777777777543221 111 1335667666666666666666
Q ss_pred Hhhhhc
Q 013331 399 WRKMKE 404 (445)
Q Consensus 399 ~~~~~~ 404 (445)
.||+|+
T Consensus 147 sr~eRG 152 (448)
T COG2271 147 SRKERG 152 (448)
T ss_pred CccccC
Confidence 666664
No 248
>PF11137 DUF2909: Protein of unknown function (DUF2909); InterPro: IPR021313 This is a family of proteins conserved in Proteobacteria of unknown function.
Probab=20.19 E-value=3.4e+02 Score=19.42 Aligned_cols=13 Identities=15% Similarity=0.483 Sum_probs=6.0
Q ss_pred HHHHHHHHHHhhc
Q 013331 345 LAAAYIAAIWTIL 357 (445)
Q Consensus 345 m~~af~~~~~~v~ 357 (445)
++++-..|+|.++
T Consensus 12 ii~sL~saL~~l~ 24 (63)
T PF11137_consen 12 IIASLFSALFFLV 24 (63)
T ss_pred HHHHHHHHHHHHh
Confidence 3444444555444
Done!