Query 013332
Match_columns 445
No_of_seqs 236 out of 1652
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 02:46:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013332.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013332hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02693 IAA-amino acid hydrol 100.0 4.3E-63 9.3E-68 500.2 49.5 434 1-445 1-437 (437)
2 PLN02280 IAA-amino acid hydrol 100.0 5.6E-63 1.2E-67 502.2 47.7 385 43-429 90-476 (478)
3 PRK08588 succinyl-diaminopimel 100.0 1.1E-56 2.3E-61 449.1 37.6 356 50-427 2-376 (377)
4 PRK06915 acetylornithine deace 100.0 1.3E-56 2.8E-61 454.8 38.2 374 34-430 3-421 (422)
5 COG1473 AbgB Metal-dependent a 100.0 1.8E-55 3.8E-60 431.2 44.3 384 38-429 3-391 (392)
6 TIGR01891 amidohydrolases amid 100.0 3.6E-54 7.8E-59 428.4 40.7 356 53-412 2-360 (363)
7 PRK13013 succinyl-diaminopimel 100.0 1.6E-54 3.5E-59 440.4 38.6 368 37-428 3-423 (427)
8 PRK06133 glutamate carboxypept 100.0 7.1E-54 1.5E-58 432.3 42.6 369 35-430 24-410 (410)
9 PRK07338 hypothetical protein; 100.0 5.3E-53 1.2E-57 425.8 39.9 364 35-428 4-399 (402)
10 PRK06837 acetylornithine deace 100.0 4.5E-53 9.7E-58 428.9 37.6 370 34-428 6-423 (427)
11 PRK13004 peptidase; Reviewed 100.0 4E-53 8.7E-58 425.9 35.1 367 37-429 4-398 (399)
12 PRK13009 succinyl-diaminopimel 100.0 1.2E-52 2.6E-57 419.7 37.8 355 51-427 3-374 (375)
13 PRK13983 diaminopimelate amino 100.0 1.3E-52 2.9E-57 423.0 35.9 359 50-425 5-399 (400)
14 TIGR03320 ygeY M20/DapE family 100.0 8.3E-53 1.8E-57 423.2 34.2 365 37-428 2-395 (395)
15 TIGR03526 selenium_YgeY putati 100.0 9.3E-53 2E-57 422.7 34.4 366 37-427 2-394 (395)
16 PRK08596 acetylornithine deace 100.0 2.9E-52 6.3E-57 422.2 37.6 369 38-430 3-419 (421)
17 TIGR01910 DapE-ArgE acetylorni 100.0 3.2E-53 7E-58 423.6 28.4 343 54-418 2-375 (375)
18 TIGR01246 dapE_proteo succinyl 100.0 8.8E-52 1.9E-56 412.6 35.3 352 53-426 2-370 (370)
19 PRK07522 acetylornithine deace 100.0 6.4E-52 1.4E-56 415.9 34.1 349 50-427 4-384 (385)
20 PRK05111 acetylornithine deace 100.0 2.2E-51 4.8E-56 411.6 37.2 348 50-428 5-382 (383)
21 TIGR01880 Ac-peptdase-euk N-ac 100.0 2.6E-51 5.6E-56 413.2 36.6 360 50-427 9-398 (400)
22 PRK08651 succinyl-diaminopimel 100.0 3.5E-51 7.6E-56 411.7 35.7 351 50-428 6-392 (394)
23 TIGR01892 AcOrn-deacetyl acety 100.0 2.5E-51 5.3E-56 408.6 33.8 339 54-423 1-364 (364)
24 PRK06446 hypothetical protein; 100.0 4.8E-51 1E-55 415.0 35.0 361 50-427 2-434 (436)
25 PRK08201 hypothetical protein; 100.0 8E-51 1.7E-55 416.0 36.6 372 37-427 3-454 (456)
26 PRK09133 hypothetical protein; 100.0 9.4E-51 2E-55 417.1 36.1 358 50-428 37-470 (472)
27 PRK08652 acetylornithine deace 100.0 1.1E-50 2.4E-55 401.3 34.5 338 50-428 2-346 (347)
28 PRK00466 acetyl-lysine deacety 100.0 2.5E-50 5.4E-55 398.2 35.1 330 50-429 10-345 (346)
29 PRK07473 carboxypeptidase; Pro 100.0 1.7E-49 3.7E-54 395.6 39.3 346 50-426 11-375 (376)
30 PRK08262 hypothetical protein; 100.0 2.9E-50 6.3E-55 414.9 32.8 370 44-428 40-485 (486)
31 PRK07907 hypothetical protein; 100.0 1.5E-49 3.2E-54 405.7 36.9 370 36-427 6-447 (449)
32 PRK09104 hypothetical protein; 100.0 2E-49 4.2E-54 406.5 37.1 374 35-427 4-462 (464)
33 PRK04443 acetyl-lysine deacety 100.0 3.8E-49 8.2E-54 390.0 34.6 332 50-426 6-348 (348)
34 TIGR01900 dapE-gram_pos succin 100.0 5.6E-49 1.2E-53 391.7 34.6 331 55-408 1-373 (373)
35 PRK08737 acetylornithine deace 100.0 9.5E-49 2.1E-53 388.1 34.7 333 50-424 6-362 (364)
36 PRK13007 succinyl-diaminopimel 100.0 1.3E-48 2.8E-53 387.2 35.2 334 49-423 6-351 (352)
37 PRK07906 hypothetical protein; 100.0 7.2E-49 1.6E-53 398.5 33.5 355 53-425 2-425 (426)
38 TIGR01883 PepT-like peptidase 100.0 1.1E-48 2.4E-53 389.0 34.1 340 52-423 2-360 (361)
39 TIGR01886 dipeptidase dipeptid 100.0 3.3E-48 7.1E-53 396.2 34.6 359 39-428 4-466 (466)
40 PRK07079 hypothetical protein; 100.0 1.5E-47 3.3E-52 392.8 37.8 371 37-429 8-457 (469)
41 PRK13381 peptidase T; Provisio 100.0 3.6E-47 7.7E-52 383.4 35.7 347 52-427 3-403 (404)
42 COG0624 ArgE Acetylornithine d 100.0 6.4E-47 1.4E-51 382.3 37.3 362 50-428 13-408 (409)
43 PRK12892 allantoate amidohydro 100.0 2E-46 4.3E-51 379.2 39.0 346 50-428 10-411 (412)
44 PRK07318 dipeptidase PepV; Rev 100.0 3E-47 6.5E-52 390.1 33.0 360 38-428 4-466 (466)
45 PRK05469 peptidase T; Provisio 100.0 2.4E-46 5.2E-51 377.8 35.6 351 50-429 2-407 (408)
46 PRK12893 allantoate amidohydro 100.0 5.9E-46 1.3E-50 375.7 38.3 346 50-428 10-410 (412)
47 PRK09290 allantoate amidohydro 100.0 6.1E-46 1.3E-50 375.3 38.4 347 50-429 7-412 (413)
48 TIGR01902 dapE-lys-deAc N-acet 100.0 9.2E-47 2E-51 371.4 31.2 327 54-428 1-335 (336)
49 PRK06156 hypothetical protein; 100.0 6E-46 1.3E-50 384.2 37.0 357 45-428 43-516 (520)
50 PRK07205 hypothetical protein; 100.0 5.7E-46 1.2E-50 378.8 35.0 354 50-429 11-444 (444)
51 PRK12891 allantoate amidohydro 100.0 1.3E-44 2.8E-49 365.4 38.9 347 51-430 11-412 (414)
52 TIGR01882 peptidase-T peptidas 100.0 2E-45 4.4E-50 370.7 32.7 348 50-427 3-407 (410)
53 PRK12890 allantoate amidohydro 100.0 8.5E-44 1.9E-48 359.9 40.3 343 50-427 9-411 (414)
54 TIGR01879 hydantase amidase, h 100.0 3.4E-43 7.4E-48 353.8 36.9 330 64-426 25-401 (401)
55 TIGR01887 dipeptidaselike dipe 100.0 2.7E-43 5.8E-48 357.4 33.2 343 50-423 2-447 (447)
56 TIGR01893 aa-his-dipept aminoa 100.0 7E-43 1.5E-47 358.7 35.3 348 50-426 4-476 (477)
57 PRK15026 aminoacyl-histidine d 100.0 1.3E-42 2.7E-47 354.3 35.4 345 50-426 10-482 (485)
58 TIGR03176 AllC allantoate amid 100.0 3.1E-41 6.8E-46 339.0 38.5 346 50-428 3-404 (406)
59 PRK08554 peptidase; Reviewed 100.0 1.9E-41 4.2E-46 343.2 32.8 355 51-427 2-437 (438)
60 PRK13590 putative bifunctional 100.0 2.8E-40 6.2E-45 345.4 40.2 348 47-429 178-589 (591)
61 PRK13799 unknown domain/N-carb 100.0 2.3E-40 4.9E-45 345.8 38.7 351 47-428 178-590 (591)
62 KOG2275 Aminoacylase ACY1 and 100.0 1.8E-40 4E-45 315.0 31.7 360 50-427 25-418 (420)
63 KOG2276 Metalloexopeptidases [ 100.0 2.1E-34 4.5E-39 270.8 30.4 375 36-427 4-471 (473)
64 COG2195 PepD Di- and tripeptid 99.9 3.1E-26 6.7E-31 224.9 18.9 350 50-427 5-412 (414)
65 PF01546 Peptidase_M20: Peptid 99.9 8.1E-22 1.8E-26 177.7 12.1 175 109-424 1-188 (189)
66 PF07687 M20_dimer: Peptidase 99.7 1.5E-17 3.3E-22 136.4 11.3 104 215-320 2-110 (111)
67 COG4187 RocB Arginine degradat 99.7 1.5E-16 3.2E-21 152.1 17.8 253 50-310 8-320 (553)
68 PRK09961 exoaminopeptidase; Pr 99.7 2.8E-15 6.1E-20 146.8 19.8 249 53-426 3-333 (344)
69 PRK10199 alkaline phosphatase 99.7 2.2E-15 4.8E-20 144.9 17.2 129 52-185 37-188 (346)
70 TIGR03106 trio_M42_hydro hydro 99.7 1.7E-14 3.7E-19 140.8 23.4 128 50-178 3-222 (343)
71 TIGR03107 glu_aminopep glutamy 99.6 1.2E-13 2.7E-18 134.8 22.2 243 54-426 2-341 (350)
72 COG1363 FrvX Cellulase M and r 99.5 8.9E-13 1.9E-17 127.3 20.8 253 50-428 2-348 (355)
73 PRK09864 putative peptidase; P 99.5 1.4E-12 3.1E-17 127.1 21.7 247 53-426 3-341 (356)
74 KOG2194 Aminopeptidases of the 98.3 4.2E-06 9E-11 88.3 11.6 134 50-198 57-224 (834)
75 PF04389 Peptidase_M28: Peptid 98.1 8.8E-06 1.9E-10 72.4 7.4 81 107-198 2-88 (179)
76 KOG3946 Glutaminyl cyclase [Po 97.1 0.014 3.1E-07 54.0 13.7 140 35-185 36-200 (338)
77 KOG2526 Predicted aminopeptida 96.4 0.049 1.1E-06 53.5 11.8 112 74-198 165-304 (555)
78 COG2234 Iap Predicted aminopep 96.3 0.014 3E-07 59.6 8.3 44 142-187 231-275 (435)
79 PF05343 Peptidase_M42: M42 gl 95.6 0.019 4.2E-07 55.1 5.4 63 131-198 124-189 (292)
80 KOG2195 Transferrin receptor a 95.2 0.055 1.2E-06 57.7 7.6 77 94-186 339-421 (702)
81 PF05343 Peptidase_M42: M42 gl 93.8 0.05 1.1E-06 52.3 3.1 70 339-418 220-292 (292)
82 PF05450 Nicastrin: Nicastrin; 92.9 0.43 9.3E-06 44.2 7.6 67 106-185 1-74 (234)
83 PRK00913 multifunctional amino 92.8 1.9 4.1E-05 44.3 12.8 132 39-174 160-309 (483)
84 cd00433 Peptidase_M17 Cytosol 92.5 3 6.4E-05 42.9 13.7 130 41-174 145-295 (468)
85 PF00883 Peptidase_M17: Cytoso 91.1 3.8 8.2E-05 39.5 12.0 110 53-174 1-140 (311)
86 PRK02256 putative aminopeptida 90.7 0.38 8.2E-06 49.2 5.1 76 340-424 380-460 (462)
87 KOG2597 Predicted aminopeptida 89.7 3.5 7.6E-05 42.2 10.8 123 50-174 189-330 (513)
88 PRK05015 aminopeptidase B; Pro 89.6 9.8 0.00021 38.2 13.7 119 50-174 100-246 (424)
89 PTZ00412 leucyl aminopeptidase 88.7 7.4 0.00016 40.4 12.5 127 42-174 204-354 (569)
90 PTZ00371 aspartyl aminopeptida 88.4 1.1 2.4E-05 46.0 6.5 79 339-426 372-455 (465)
91 PRK02813 putative aminopeptida 87.6 0.86 1.9E-05 46.3 5.1 75 340-423 346-425 (428)
92 TIGR01893 aa-his-dipept aminoa 85.1 1.6 3.5E-05 45.2 5.7 44 265-316 336-379 (477)
93 PF07172 GRP: Glycine rich pro 80.9 0.53 1.1E-05 36.9 0.1 13 1-13 1-13 (95)
94 COG0260 PepB Leucyl aminopepti 75.9 46 0.001 34.3 12.3 119 48-174 165-308 (485)
95 PF10829 DUF2554: Protein of u 64.1 9.1 0.0002 27.8 3.0 20 3-22 2-21 (76)
96 COG4882 Predicted aminopeptida 60.4 20 0.00043 35.1 5.6 71 94-185 179-259 (486)
97 PRK02256 putative aminopeptida 50.6 25 0.00054 36.1 4.9 44 132-179 251-297 (462)
98 PF06675 DUF1177: Protein of u 45.4 45 0.00098 30.9 5.1 84 105-198 31-129 (276)
99 cd06406 PB1_P67 A PB1 domain i 41.8 64 0.0014 24.4 4.6 57 286-349 8-66 (80)
100 TIGR02837 spore_II_R stage II 37.0 1.2E+02 0.0025 26.5 6.1 17 72-88 92-108 (168)
101 PRK06156 hypothetical protein; 30.4 2.7E+02 0.0058 29.1 9.0 25 268-292 240-264 (520)
102 PF11853 DUF3373: Protein of u 29.4 23 0.00051 36.3 0.8 17 3-20 1-17 (489)
103 COG4635 HemG Flavodoxin [Energ 28.8 33 0.00071 29.6 1.5 33 59-91 4-36 (175)
104 PRK02813 putative aminopeptida 28.4 65 0.0014 32.8 3.8 43 134-181 227-275 (428)
105 COG2195 PepD Di- and tripeptid 27.8 68 0.0015 32.5 3.8 69 106-180 62-139 (414)
106 cd06411 PB1_p51 The PB1 domain 26.2 1.2E+02 0.0027 22.7 3.9 30 286-317 4-33 (78)
107 PF04114 Gaa1: Gaa1-like, GPI 24.0 3E+02 0.0065 28.7 7.8 73 93-186 3-78 (504)
108 TIGR03042 PS_II_psbQ_bact phot 23.0 1.2E+02 0.0026 25.7 3.7 9 4-12 2-10 (142)
109 KOG3566 Glycosylphosphatidylin 22.7 7.6E+02 0.017 26.2 10.0 89 75-185 93-193 (617)
110 COG2984 ABC-type uncharacteriz 22.6 3.9E+02 0.0083 26.0 7.5 64 106-176 110-173 (322)
111 COG1362 LAP4 Aspartyl aminopep 21.2 1.6E+02 0.0034 29.7 4.8 77 340-425 354-435 (437)
112 PF12046 DUF3529: Protein of u 21.2 94 0.002 27.2 2.9 59 5-89 4-62 (173)
No 1
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=4.3e-63 Score=500.24 Aligned_cols=434 Identities=62% Similarity=1.032 Sum_probs=360.2
Q ss_pred CchhhHHHHHHHHHHhhcCccccCCCCCchhccccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHH
Q 013332 1 MGSSKLLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAEL 80 (445)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l 80 (445)
|++-..++.-++++|+-+++-| .--+-+.+|...++.+..++.++.+++++++++|+++||+|++|.++++||+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L 77 (437)
T PLN02693 1 MALNNFLTFQLLLLLLRVSSES---PWIAGDVSQIQINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSEL 77 (437)
T ss_pred CccchhHHHHHHHHHHHhccCC---CccccchhhhHHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHH
Confidence 4444444444444444444422 2223455677778877766633447899999999999999999999999999999
Q ss_pred HhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhcccc
Q 013332 81 DQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHE 160 (445)
Q Consensus 81 ~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~ 160 (445)
+++|++++...+++||+|+++++++|+|+|+|||||||+++..+|++++..+|++||||||+++|++++|+++|++.+..
T Consensus 78 ~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~ 157 (437)
T PLN02693 78 DLIGIKYRYPVAITGIIGYIGTGEPPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHH 157 (437)
T ss_pred HHCCCeeEecCCCcEEEEEECCCCCCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCccc
Confidence 99999987644689999999655569999999999999988888999988889999999999999999999999987767
Q ss_pred CCceEEEEEeecCCCCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCC
Q 013332 161 IKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTI 240 (445)
Q Consensus 161 l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~ 240 (445)
++++|.|+|++|||++.|++.++++|.+++.|+++++|..+..+.|.+..+.|..++|..+++|+++|+++|+|.|+.|+
T Consensus 158 ~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~ 237 (437)
T PLN02693 158 LQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTI 237 (437)
T ss_pred CCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEEEEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCc
Confidence 88999999999999768999999999877778999999877777888877888888999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHh
Q 013332 241 DPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASV 320 (445)
Q Consensus 241 NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~ 320 (445)
|||..+++++.+|+++..+..++....+++++.|+||.+.|+||++|++++|+|+.+.+ +.+.++|++ +++..+..
T Consensus 238 nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~--i~~~~a~~ 313 (437)
T PLN02693 238 DPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKE--IITKQAAV 313 (437)
T ss_pred CHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEEcCCCCceECCeEEEEEEEecCCHH--HHHHHHHHH--HHHHHHHH
Confidence 99999999999999986555556677899999999999999999999999999999974 589999999 99887777
Q ss_pred hCCeEEEEecc--cCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCC
Q 013332 321 QRCNATVTFDD--KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFE 398 (445)
Q Consensus 321 ~~~~~~i~~~~--~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~ 398 (445)
+++++++++.. ..++++..+|+++++.+++++++.+|.+.+.......|++|+++|++.+|++++.+|+.++..| ..
T Consensus 314 ~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~~G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~~~-~~ 392 (437)
T PLN02693 314 HRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDLLGQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDETNG-YA 392 (437)
T ss_pred hCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHhcCCcceeecCCCceechHHHHHHHhhhhEEEEecCCCCCC-CC
Confidence 78877776521 2356677888899999999999988876543233567999999999999999888897642111 24
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCccccc-ccccCCC
Q 013332 399 TGHSPYFRVNEDALPYGAALHASLATRYLLENQPKTTLAS-RSLHDEL 445 (445)
Q Consensus 399 ~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~~~~~~~~~~-~~~~~~~ 445 (445)
..|+|+|+++.+.|..++++|+.++.+++.+.++ +++ ...|||+
T Consensus 393 ~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~ 437 (437)
T PLN02693 393 SSHSPLYRINEDVLPYGAAIHATMAVQYLKEKAS---KGSVSGFHDEL 437 (437)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHhhccc---cCCCCCCccCC
Confidence 7999999999999999999999999999986444 333 5677775
No 2
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=5.6e-63 Score=502.24 Aligned_cols=385 Identities=59% Similarity=1.020 Sum_probs=338.3
Q ss_pred hcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccCCCC
Q 013332 43 AKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEES 122 (445)
Q Consensus 43 ~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~ 122 (445)
....++.+.+.++.+.++++|+++++|.++++||.++|+++|+++++..+++|++++++++++|+|+|+|||||||+++.
T Consensus 90 ~~~~~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~ 169 (478)
T PLN02280 90 AYQPDTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEA 169 (478)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCCCcccCC
Confidence 33344558889999999999999999999999999999999999887666889999996444589999999999999888
Q ss_pred CCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCCccHHHHHHccCCCCcceeEEecccCC
Q 013332 123 VEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSL 202 (445)
Q Consensus 123 ~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~~d~~i~~~~~~~ 202 (445)
.+|+++++++|+|||||+|+++|++++++++|++.+.+++++|.|+|++|||.+.|+++++++|.+++.|+++++|+.+.
T Consensus 170 ~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~ 249 (478)
T PLN02280 170 VEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHE 249 (478)
T ss_pred CCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCC
Confidence 88999988999999999999999999999999887777899999999999996679999999998888899999998766
Q ss_pred CCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCcccc
Q 013332 203 FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNI 282 (445)
Q Consensus 203 ~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~Nv 282 (445)
+|++.+..+.+..++|..+++|+++|+++|+|.|+.|+|||..+++++..|+.+..+..++....+++++.|+||.+.|+
T Consensus 250 ~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~Nv 329 (478)
T PLN02280 250 HPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDM 329 (478)
T ss_pred CCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCE
Confidence 88887777777788899999999999999999999999999999999999998865555556678999999999999999
Q ss_pred ccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecc--cCCCCcccCCHHHHHHHHHHHHHhcCCcc
Q 013332 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNLHEHFQKVAADMLGVQN 360 (445)
Q Consensus 283 iP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~d~~l~~~~~~a~~~~~g~~~ 360 (445)
||++|++.+|+|+.+.++.+++.++|++ +++..+..+++++++++.. ...+|+..+++++++.+++++.+.+|.+.
T Consensus 330 IPd~~~l~~diR~~~~e~~e~l~~~I~~--~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~ 407 (478)
T PLN02280 330 IPDTVVLGGTFRAFSNTSFYQLLKRIQE--VIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPAN 407 (478)
T ss_pred eCCEEEEEEEEecCCHHHHHHHHHHHHH--HHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccc
Confidence 9999999999999999999999999999 9988777788887776521 23578888899999999999888777653
Q ss_pred cccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 361 IKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 361 ~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
........|++|+++|.+.+|++++++|+.+..||....+|+++|++++++|..++++|+.++.+++..
T Consensus 408 ~~~~~~~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~l~~ 476 (478)
T PLN02280 408 FTVVPPMMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLIE 476 (478)
T ss_pred cccCCCCeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 222235678999999998899999988987655676678999999999999999999999999998863
No 3
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.1e-56 Score=449.09 Aligned_cols=356 Identities=20% Similarity=0.245 Sum_probs=300.1
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec---cCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCc
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE 126 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~---~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~ 126 (445)
+++++++++|++|||+|++|.++++||.++|+++||+++.. ++++|+++++++++ |+|+|+||+||||+++...|.
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~~-~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSGS-PVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCCC-ceEEEEeeecccCCCCcccCc
Confidence 56899999999999999999999999999999999998753 35789999996544 899999999999998777895
Q ss_pred ---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEec
Q 013332 127 ---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (445)
Q Consensus 127 ---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~ 198 (445)
|. .++||+|||||+ |++++++|.|+++|++.+..++++|.|+|++||| ++.|++++++++.+.++|++++.
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~- 159 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIG- 159 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEe-
Confidence 44 468999999998 8999999999999998887888999999999999 56899999999877778887764
Q ss_pred ccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc---CCCCCCeeEEEEEEE
Q 013332 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE---ADPLDSQVLTVAKFE 275 (445)
Q Consensus 199 ~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~---~~~~~~~t~~i~~i~ 275 (445)
+|++.. ...+++|..+++|+++|+++|+|.|+.|.|||..+++++..++++..+. .+..+..+++++.|+
T Consensus 160 ----ep~~~~---i~~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 160 ----EPSGHG---IVYAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred ----cCCCce---eEEEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 343221 1135789999999999999999999999999999999999998764322 123457899999999
Q ss_pred cCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCccc--CCHHHHHHHHHHHH
Q 013332 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTV--NNKNLHEHFQKVAA 353 (445)
Q Consensus 276 gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~d~~l~~~~~~a~~ 353 (445)
||...|+||++|++++|+|+.|+++.+++.++|++ +++......++++++++ ...++++. .++++++.++++++
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~--~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~l~~~~~~~~~ 308 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQE--IINEVNQNGAAQLSLDI--YSNHRPVASDKDSKLVQLAKDVAK 308 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHH--HHHHHhhccCCceEEEE--ecCCCCcCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99876655556677765 34455553 35789999999999
Q ss_pred HhcCCcccccCCCCCccchHHHHHhh---cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 354 DMLGVQNIKENRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 354 ~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
+.+|.++. ....+|++|+++|... +|++. +| ||+...+|++||+++++++.+++++|.+++.+++
T Consensus 309 ~~~g~~~~--~~~~~g~tD~~~~~~~~~~ip~i~--~G-----pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 376 (377)
T PRK08588 309 SYVGQDIP--LSAIPGATDASSFLKKKPDFPVII--FG-----PGNNLTAHQVDEYVEKDMYLKFIDIYKEIIIQYL 376 (377)
T ss_pred HhhCCCCc--eecCCCcccHHHHhhhcCCCCEEE--EC-----CCCCccCCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 98787653 3567899999999853 56554 67 5544679999999999999999999999998876
No 4
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=1.3e-56 Score=454.80 Aligned_cols=374 Identities=18% Similarity=0.235 Sum_probs=309.3
Q ss_pred ccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec--------------------cCC
Q 013332 34 QIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--------------------VAV 93 (445)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~--------------------~~~ 93 (445)
+...++++++++++ +++++++++|++|||+|++|.++++||+++|+++|+++++. +++
T Consensus 3 ~~~~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (422)
T PRK06915 3 QLKKQICDYIESHE--EEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDS 80 (422)
T ss_pred HHHHHHHHHHHhhH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCC
Confidence 45778999999988 99999999999999999999999999999999999998641 246
Q ss_pred ceEEEEEcCC-CCcEEEEEEecccccCCCCCCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceE
Q 013332 94 TGVVGYIGTG-QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTI 165 (445)
Q Consensus 94 ~nvia~~~~~-~~p~i~l~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i 165 (445)
+||++++++. ++|+|+|+|||||||+++...|+ |. .++||+|||||+ ||+++++|.|+++|++.+..++++|
T Consensus 81 ~nlia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v 160 (422)
T PRK06915 81 PNIVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDV 160 (422)
T ss_pred ceEEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 8999999653 46899999999999998888894 44 467999999998 7999999999999998877788999
Q ss_pred EEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHH
Q 013332 166 VLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIV 244 (445)
Q Consensus 166 ~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~ 244 (445)
.|++++||| ++.|+..++.++. ..|++++ ++|++.. ...+++|..+++|+++|+++|+|.|+.|.|||.
T Consensus 161 ~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~-----~ep~~~~---i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~ 230 (422)
T PRK06915 161 IFQSVIEEESGGAGTLAAILRGY--KADGAII-----PEPTNMK---FFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIE 230 (422)
T ss_pred EEEEecccccCCcchHHHHhcCc--CCCEEEE-----CCCCCcc---ceeecccEEEEEEEEEeeccccCCCCcCcCHHH
Confidence 999999999 6689988888764 4688875 3466532 235689999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcc----cCCCC-----CCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHH
Q 013332 245 AASNVIVSLQHLVSR----EADPL-----DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVM 315 (445)
Q Consensus 245 ~~~~~i~~l~~~~~~----~~~~~-----~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 315 (445)
.+++++..|+.+... ...+. .+.|+|++.|+||...|+||+.|++.+|+|+.|+++.+++.++|++ .++
T Consensus 231 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~--~l~ 308 (422)
T PRK06915 231 KSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFEN--WIA 308 (422)
T ss_pred HHHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHH--HHH
Confidence 999999999887532 11111 2458999999999999999999999999999999999999999999 888
Q ss_pred HHHHhh----CCeEEEEecccC-CCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh--cCeEEEEec
Q 013332 316 KQASVQ----RCNATVTFDDKS-FYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA--IPGYFYYLG 388 (445)
Q Consensus 316 ~~~~~~----~~~~~i~~~~~~-~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~--ip~~~~~~G 388 (445)
+.+... +..+++++.... ...+...|+++++.+++++++++|.++. ....+|++|+++|.+. +|+++ ||
T Consensus 309 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~g~tD~~~~~~~~giP~v~--fG 384 (422)
T PRK06915 309 ELNDVDEWFVEHPVEVEWFGARWVPGELEENHPLMTTLEHNFVEIEGNKPI--IEASPWGTDGGLLTQIAGVPTIV--FG 384 (422)
T ss_pred HHhccChhhhcCCceEEeecccCCcccCCCCCHHHHHHHHHHHHHhCCCCe--eceeeeeccHHHHhccCCCCEEE--EC
Confidence 765421 223444431111 1113456789999999999998888764 2457789999999985 99976 45
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhc
Q 013332 389 MNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLEN 430 (445)
Q Consensus 389 ~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~~ 430 (445)
||....+|++||+++++++..++++|++++.+++..+
T Consensus 385 -----pg~~~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~~ 421 (422)
T PRK06915 385 -----PGETKVAHYPNEYIEVDKMIAAAKIIALTLLDWCEVK 421 (422)
T ss_pred -----CCCccccCCCCceeEHHHHHHHHHHHHHHHHHHhCCC
Confidence 4445679999999999999999999999999998643
No 5
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=1.8e-55 Score=431.21 Aligned_cols=384 Identities=43% Similarity=0.703 Sum_probs=345.9
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccC-CceEEEEEcCC-CCcEEEEEEecc
Q 013332 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVA-VTGVVGYIGTG-QPPFVALRADMD 115 (445)
Q Consensus 38 ~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~-~~nvia~~~~~-~~p~i~l~~H~D 115 (445)
++++.+ ..+ ++++++.|+|+++|+.|++|.++++||+++|+++||++....+ +++|+|.++++ ++|+|+|++.||
T Consensus 3 ~~~~~~-~~~--~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~D 79 (392)
T COG1473 3 KILDEI-ELK--DELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMD 79 (392)
T ss_pred hHHHHH-hhh--HHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecc
Confidence 445555 444 8999999999999999999999999999999999999444433 69999999865 457999999999
Q ss_pred cccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCCccHHHHHHccCCCC-ccee
Q 013332 116 ALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALEN-VEAI 194 (445)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~-~d~~ 194 (445)
.+|..+..+++|.+..+|++|+||||++.+++|+++++|++...+++++|+|+|+|.||++.|++.|+++|.+++ +|++
T Consensus 80 ALPi~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v 159 (392)
T COG1473 80 ALPIQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAV 159 (392)
T ss_pred cCccccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEE
Confidence 999999999999999999999999999999999999999988668999999999999997779999999999998 9999
Q ss_pred EEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEE
Q 013332 195 FGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKF 274 (445)
Q Consensus 195 i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i 274 (445)
+++|+.++.|.|.+.+++|....+...++++++|+++|++.|+.++||+..++.++..|+.+..|..+|.....++++.+
T Consensus 160 ~g~H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~ 239 (392)
T COG1473 160 FGLHPGPGLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKI 239 (392)
T ss_pred EEecCCCCCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEe
Confidence 99999887789999999998888899999999999999999999999999999999999999988888888899999999
Q ss_pred EcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHH
Q 013332 275 EGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAAD 354 (445)
Q Consensus 275 ~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~ 354 (445)
+||.+.||||+.+++..++|....+..+.+.++|++ ++++++..+++++++.+ ...+|++.+|+.+.+.+++++++
T Consensus 240 ~aG~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~--ia~g~a~~~g~~~ei~~--~~~~p~~~Nd~~~~~~~~~~~~~ 315 (392)
T COG1473 240 EAGTAANVIPDSAELEGTIRTFSDEVREKLEARIER--IAKGIAAAYGAEAEIDY--ERGYPPVVNDPALTDLLAEAAEE 315 (392)
T ss_pred cCCCcCCcCCCeeEEEEEeecCCHHHHHHHHHHHHH--HHHHHHHHhCCeEEEEe--cCCCCCccCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 99999999999999999 88999999999999999999999
Q ss_pred hcCCcccc--cCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 355 MLGVQNIK--ENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 355 ~~g~~~~~--~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
..|...+. ......||+|+++|.+.+|..++.+|......+ ....|+|...++.+.+..+++++..++..++..
T Consensus 316 ~~~~~~~~~~~~~~~~gsEDf~~~~~~~Pg~~~~lG~~~~~~~-~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~~ 391 (392)
T COG1473 316 VGGEEVVVVELPPSMAGSEDFGYYLEKVPGAFFFLGTGSADGG-TYPLHHPKFDFDEAALATGVKLLAALALLYLAK 391 (392)
T ss_pred hccccceecccCCCCCccchHHHHHHhCCeeEEEeecCcCCCC-cccccCCcCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 97644321 222345999999999999999999997653211 245999999999999999999999999888753
No 6
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=3.6e-54 Score=428.36 Aligned_cols=356 Identities=44% Similarity=0.753 Sum_probs=298.7
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeee-ccCCceEEEEEcCC-CCcEEEEEEecccccCCCCCCCccccC
Q 013332 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF-PVAVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEHKSK 130 (445)
Q Consensus 53 ~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~-~~~~~nvia~~~~~-~~p~i~l~~H~DtVp~~~~~~w~~~~~ 130 (445)
.+++++|++|||+|++|.++++||.++|+++|++++. .....|++++++++ ++|+|+|+|||||||+++...+||...
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 5789999999999999999999999999999999986 44578999999764 468999999999999876555677755
Q ss_pred CCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCCccHHHHHHccCCCCcceeEEecccCCCCCCceee
Q 013332 131 VPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVAS 210 (445)
Q Consensus 131 ~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~ 210 (445)
+||++||||+|++++++++|++.|++.+..++++|.|+|++|||.+.|++++++++.+++.|+++++++.+..+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999999999999999988766788999999999999768999999988777789999988766666776655
Q ss_pred ccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEE
Q 013332 211 RPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIG 290 (445)
Q Consensus 211 ~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~ 290 (445)
..+..++|..+++|+++|+++|++.|+.|+||+..+++++.+++++......+....++|++.|+||.+.|+||++|+++
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 66778899999999999999999999999999999999999998864332233345789999999999999999999999
Q ss_pred EEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCccc-ccCCCCCc
Q 013332 291 GTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNI-KENRPLMG 369 (445)
Q Consensus 291 ~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~-~~~~~~~g 369 (445)
+|+|+.|.++.+++.++|++ +++..+...+++++++. ...+|+...++++++.+++++++.+|..+. ..+..++|
T Consensus 242 ~diR~~~~~~~e~~~~~i~~--~~~~~~~~~~~~ve~~~--~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~g 317 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIER--IVEGAAAMYGAKVELNY--DRGLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMG 317 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHH--HHHHHHHHhCCeEEEEE--ecCCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCcc
Confidence 99999999999999999999 99888777788888876 345565666889999999999997785432 12246889
Q ss_pred cchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCch
Q 013332 370 TEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDAL 412 (445)
Q Consensus 370 ~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l 412 (445)
++|++++++.+|++++++|.....-++....|+++...+.+-+
T Consensus 318 g~Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 318 SEDFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred ccCHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 9999999999999988888764211123578999887765544
No 7
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.6e-54 Score=440.40 Aligned_cols=368 Identities=16% Similarity=0.157 Sum_probs=298.0
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCC--c-chHHHHHHHHHHHHhCCCCeeecc-----------CCceEEEEEcC
Q 013332 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELG--F-QEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGT 102 (445)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~ll~~l~~ips~s--~-~E~~~a~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~ 102 (445)
.++.+++++++ +++++++++|++|||++ + +|+++++||+++|+++||++++.. .++|+++++++
T Consensus 3 ~~~~~~~~~~~--~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g 80 (427)
T PRK13013 3 DRLFAAIEARR--DDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQG 80 (427)
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecC
Confidence 35778888877 99999999999999987 3 568999999999999999987532 14699999965
Q ss_pred C-CCcEEEEEEecccccCCCCCCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 103 G-QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 103 ~-~~p~i~l~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
+ ++|+|+|+||+||||+++ .|+ |. .++||+|||||+ ||+++++|+|+++|++.+..++++|.|+|++|||
T Consensus 81 ~~~~~~i~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE 158 (427)
T PRK13013 81 ARDGDCVHFNSHHDVVEVGH--GWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEE 158 (427)
T ss_pred CCCCCEEEEEeccccCCCCC--CCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccc
Confidence 3 458999999999999874 584 54 467999999998 8999999999999998877788999999999999
Q ss_pred -CC-ccHHHHHHccCCC--CcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHH
Q 013332 175 -GG-GGAKKMLDAGALE--NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVI 250 (445)
Q Consensus 175 -g~-~G~~~l~~~~~~~--~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i 250 (445)
++ .|.+++++++.+. ..|++|+. +|++...+ ..+++|..+++|+++|+++|+|.|+.|.|||..++++|
T Consensus 159 ~g~~~g~~~l~~~~~~~~~~~d~~i~~-----ep~~~~~i--~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l 231 (427)
T PRK13013 159 SGGFGGVAYLAEQGRFSPDRVQHVIIP-----EPLNKDRI--CLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVL 231 (427)
T ss_pred cCChhHHHHHHhcCCccccCCCEEEEe-----cCCCCCce--EEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHH
Confidence 55 4788888887665 45887764 34442111 23578999999999999999999999999999999999
Q ss_pred HHHHHhhcc-----cC-CC-----CCCeeEEEEEEEcCCcc----------ccccCcEEEEEEEecCChhhHHHHHHHHH
Q 013332 251 VSLQHLVSR-----EA-DP-----LDSQVLTVAKFEGGGAF----------NIIPDSVTIGGTFRAFSKESIIQLKQRIE 309 (445)
Q Consensus 251 ~~l~~~~~~-----~~-~~-----~~~~t~~i~~i~gG~~~----------NviP~~a~~~~diR~~~~~~~~~v~~~i~ 309 (445)
.+|++...+ .. .+ ....++|++.|+||... |+||++|++++|+|+.|.++.+++.++|+
T Consensus 232 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~ 311 (427)
T PRK13013 232 AEIEERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEIT 311 (427)
T ss_pred HHHHHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHH
Confidence 999765311 00 01 13578999999999776 99999999999999999999999999999
Q ss_pred hHHHHHHHHHh-hCCeEEEEecccCCCCccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh--c-CeE
Q 013332 310 EWQVVMKQASV-QRCNATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA--I-PGY 383 (445)
Q Consensus 310 ~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~--~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~--i-p~~ 383 (445)
+ ++++.+.. .+++++++. ...++++. .++++++.+.+++++.+|.++. ....+|++|++++.+. + |++
T Consensus 312 ~--~i~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~lv~~l~~a~~~~~g~~~~--~~~~~g~~D~~~~~~~g~~~~~v 385 (427)
T PRK13013 312 A--LLERLKRARPGFAYEIRD--LFEVLPTMTDRDAPVVRSVAAAIERVLGRQAD--YVVSPGTYDQKHIDRIGKLKNCI 385 (427)
T ss_pred H--HHHHHHhhCCCceeEEEE--cccCCcccCCCCCHHHHHHHHHHHHhhCCCCc--eeecCccCCHHHHHhcCCCCCEE
Confidence 9 98876543 245555544 33455554 3468999999999998788653 3457888999999886 3 344
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 384 FYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 384 ~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
.|| ||....+|++|||++++++.+++++|++++.+++.
T Consensus 386 --~fG-----Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~ 423 (427)
T PRK13013 386 --AYG-----PGILDLAHQPDEWVGIADMVDSAKVMALVLADLLA 423 (427)
T ss_pred --EEC-----CCCccccCCCCceeEHHHHHHHHHHHHHHHHHHhc
Confidence 467 55556799999999999999999999999999975
No 8
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=7.1e-54 Score=432.35 Aligned_cols=369 Identities=18% Similarity=0.187 Sum_probs=303.0
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchH---HHHHHHHHHHHhCCCCeeecc----CCceEEEEEcCCCCcE
Q 013332 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEF---ETSKLIRAELDQMGIPYKFPV----AVTGVVGYIGTGQPPF 107 (445)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~---~~a~~l~~~l~~~G~~~~~~~----~~~nvia~~~~~~~p~ 107 (445)
..+++.++++++. +++++++++|++|||+|++|. ++++||+++|+++|+++++.. .++||++++++.++|+
T Consensus 24 ~~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~ 101 (410)
T PRK06133 24 PDAELLAAAQQEQ--PAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRR 101 (410)
T ss_pred hHHHHHHHHHHhH--HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCce
Confidence 4567999999988 999999999999999998754 899999999999999987632 3579999996544589
Q ss_pred EEEEEecccccCCCCCCCccc--cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHH
Q 013332 108 VALRADMDALAMEESVEWEHK--SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKK 181 (445)
Q Consensus 108 i~l~~H~DtVp~~~~~~w~~~--~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~ 181 (445)
|+|+|||||||.+. .|.++ .++||+|||||+ |++++++|++++.|++.+..++++|.|+|++||| ++.|++.
T Consensus 102 ill~~H~D~Vp~~~--~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~ 179 (410)
T PRK06133 102 IMLIAHMDTVYLPG--MLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRE 179 (410)
T ss_pred EEEEeecCccCCCC--ccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHH
Confidence 99999999999864 47433 367899999997 8999999999999998877778999999999999 6689999
Q ss_pred HHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhccc
Q 013332 182 MLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSRE 260 (445)
Q Consensus 182 l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~~g~NAi~~~~~~i~~l~~~~~~~ 260 (445)
++++.. .+.|++|+.++ +.+.+.+. .+++|..+++++++|+++||| .|+.|.|||..+++++..|+++..
T Consensus 180 ~~~~~~-~~~d~~i~~ep--~~~~~~v~----~~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~-- 250 (410)
T PRK06133 180 LIAELA-AQHDVVFSCEP--GRAKDALT----LATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD-- 250 (410)
T ss_pred HHHHHh-ccCCEEEEeCC--CCCCCCEE----EeccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC--
Confidence 997643 35788888654 23333443 246899999999999999986 799999999999999999988642
Q ss_pred CCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccC
Q 013332 261 ADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVN 340 (445)
Q Consensus 261 ~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 340 (445)
+....+++++.|+||.+.|+||++|++.+|+|+.|.++.+++.++|++ ++++ ....+++++++. ...+|++..
T Consensus 251 --~~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~--~~~~-~~~~~~~~~~~~--~~~~~~~~~ 323 (410)
T PRK06133 251 --PAKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQE--KVKN-KLVPDTEVTLRF--ERGRPPLEA 323 (410)
T ss_pred --CCCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHH--HHhc-cCCCCeEEEEEe--ccccCCccc
Confidence 223578999999999999999999999999999999999999999999 8876 333466666665 445666543
Q ss_pred ---CHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 013332 341 ---NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 416 (445)
Q Consensus 341 ---d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~ 416 (445)
+.++++.+++++++. |.++.......+|++|++++... +|++++++|+.+ ..+|++||||+++++..++
T Consensus 324 ~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~~~~~~ 396 (410)
T PRK06133 324 NAASRALAEHAQGIYGEL-GRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVG------FGAHSNDEYIELNSIVPRL 396 (410)
T ss_pred CcchHHHHHHHHHHHHHc-CCCccccccCCCCCchHHHHHhcCCCceEecccCCC------CCCCCCCcEEEcccHHHHH
Confidence 346888888887775 65542112457899999999987 888887788432 4699999999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 013332 417 ALHASLATRYLLEN 430 (445)
Q Consensus 417 ~~~~~~i~~l~~~~ 430 (445)
++|.+++.++++++
T Consensus 397 ~~~~~~~~~~~~~~ 410 (410)
T PRK06133 397 YLLTRMIMELSRDK 410 (410)
T ss_pred HHHHHHHHHhhcCC
Confidence 99999999998763
No 9
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-53 Score=425.85 Aligned_cols=364 Identities=20% Similarity=0.184 Sum_probs=296.7
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcch---HHHHHHHHHHHHhCCCCeeecc----------C-------Cc
Q 013332 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFPV----------A-------VT 94 (445)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E---~~~a~~l~~~l~~~G~~~~~~~----------~-------~~ 94 (445)
...+++++++++. ++++++|++|++|||+|+++ .++++||+++|+++||+++..+ + .+
T Consensus 4 ~~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (402)
T PRK07338 4 EERAVLDLIDDRQ--APMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGP 81 (402)
T ss_pred HHHHHHHHHhhhH--HHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCC
Confidence 3456788888877 99999999999999999774 5799999999999999987521 1 25
Q ss_pred eEEEEEcCCCCcEEEEEEecccccCCCCCCCcccc---CCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEE
Q 013332 95 GVVGYIGTGQPPFVALRADMDALAMEESVEWEHKS---KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLV 168 (445)
Q Consensus 95 nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~~~---~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i 168 (445)
||+++++++.+++|+|+||+||||++. .||.. ++||+|||||+ ||+++++|+|+++|++.+..++++|.|+
T Consensus 82 nl~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~ 158 (402)
T PRK07338 82 ALHVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVL 158 (402)
T ss_pred eEEEEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 999999654336899999999999863 46652 67999999998 8999999999999998877788999999
Q ss_pred EeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCC-CCCCCCHHHHH
Q 013332 169 FQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-PQHTIDPIVAA 246 (445)
Q Consensus 169 ~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~-p~~g~NAi~~~ 246 (445)
|++||| ++.|++.+++++. ...+++++.++ ..+.+.+. .+++|..+++|+++|+++|+|. |+.|.|||..+
T Consensus 159 ~~~dEE~g~~g~~~~~~~~~-~~~~~~i~~ep--~~~~~~v~----~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~ 231 (402)
T PRK07338 159 INPDEEIGSPASAPLLAELA-RGKHAALTYEP--ALPDGTLA----GARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAA 231 (402)
T ss_pred EECCcccCChhhHHHHHHHh-ccCcEEEEecC--CCCCCcEE----eecceeEEEEEEEEeEcccCCCCcccCccHHHHH
Confidence 999999 6679999988754 34577776543 22334432 2467999999999999999995 89999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEE
Q 013332 247 SNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNAT 326 (445)
Q Consensus 247 ~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 326 (445)
++++.+|+++... ....++|++.|+||.+.|+||++|++++|+|+.|.++.+++.++|++ ++++.+...+++++
T Consensus 232 ~~~i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~--~~~~~~~~~~~~~~ 305 (402)
T PRK07338 232 AELALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKK--LIAQVNQRHGVSLH 305 (402)
T ss_pred HHHHHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHH--HHhccccCCCeEEE
Confidence 9999999887432 23468999999999999999999999999999999999999999999 98876555566665
Q ss_pred EEecccCCCCccc---CCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCC
Q 013332 327 VTFDDKSFYPVTV---NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHS 402 (445)
Q Consensus 327 i~~~~~~~~~~~~---~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~ 402 (445)
++. ...+|++. .++++++.++++.++. |.++. ...++|++|++++... +|++. ++|+ |. ..+|+
T Consensus 306 ~~~--~~~~~p~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~-~~Gp-----g~-~~~H~ 373 (402)
T PRK07338 306 LHG--GFGRPPKPIDAAQQRLFEAVQACGAAL-GLTID--WKDSGGVCDGNNLAAAGLPVVD-TLGV-----RG-GNIHS 373 (402)
T ss_pred EEc--cccCCCCCCCcchHHHHHHHHHHHHHc-CCCcc--cccCCccchHHHHhhcCCCeEe-ccCC-----CC-CCCCC
Confidence 543 22345543 3457999999988775 87653 3568899999999877 99874 4663 32 45899
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 403 PYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 403 ~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
+|||++++++.+++++|+.++.++..
T Consensus 374 ~~E~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 374 EDEFVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred ccceEehhhHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998864
No 10
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.5e-53 Score=428.94 Aligned_cols=370 Identities=16% Similarity=0.126 Sum_probs=302.9
Q ss_pred ccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec--------------------cCC
Q 013332 34 QIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--------------------VAV 93 (445)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~--------------------~~~ 93 (445)
...+++.++++.+. +++++++++|++|||+|++|.++++||+++|+++|+++++. +++
T Consensus 6 ~~~~~~~~~i~~~~--~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (427)
T PRK06837 6 DLTQRILAAVDAGF--DAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGA 83 (427)
T ss_pred HHHHHHHHHHHhhh--HHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCC
Confidence 35677889999987 99999999999999999999999999999999999998641 247
Q ss_pred ceEEEEEcCC--CCcEEEEEEecccccCCCCCCCcc---c-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCce
Q 013332 94 TGVVGYIGTG--QPPFVALRADMDALAMEESVEWEH---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGT 164 (445)
Q Consensus 94 ~nvia~~~~~--~~p~i~l~~H~DtVp~~~~~~w~~---~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~ 164 (445)
+||++++++. ++|+|+|+|||||||+++.+.|+. . .++||+|||||+ ||+++++|.|+++|++.+..++++
T Consensus 84 ~nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~ 163 (427)
T PRK06837 84 PNVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAAR 163 (427)
T ss_pred ceEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCc
Confidence 8999999653 368999999999999987778954 3 467899999998 899999999999999888788999
Q ss_pred EEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHH
Q 013332 165 IVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPI 243 (445)
Q Consensus 165 i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi 243 (445)
|.|+|++||| ++.|+..++..+. ..|++|+. +|++.. ...+++|..+++|+++|+++|+|.|+.|.||+
T Consensus 164 i~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~-----ep~~~~---i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi 233 (427)
T PRK06837 164 VHFQSVIEEESTGNGALSTLQRGY--RADACLIP-----EPTGEK---LVRAQVGVIWFRLRVRGAPVHVREAGTGANAI 233 (427)
T ss_pred EEEEEEeccccCCHhHHHHHhcCc--CCCEEEEc-----CCCCCc---cccccceeEEEEEEEEeeccccCCcccCcCHH
Confidence 9999999999 6789888887764 46777753 355432 22457899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccc-----CC-----CCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHH
Q 013332 244 VAASNVIVSLQHLVSRE-----AD-----PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQV 313 (445)
Q Consensus 244 ~~~~~~i~~l~~~~~~~-----~~-----~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~ 313 (445)
..+++++.+|+++.... .. .....++|++.|+||...|+||+.|++.+++|+.|+++.+++.++|++ +
T Consensus 234 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~--~ 311 (427)
T PRK06837 234 DAAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEA--C 311 (427)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHH--H
Confidence 99999999998764211 00 123468999999999999999999999999999999999999999999 8
Q ss_pred HHHHHHhh----CCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHh-h-cCeEEE
Q 013332 314 VMKQASVQ----RCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE-A-IPGYFY 385 (445)
Q Consensus 314 ~~~~~~~~----~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-ip~~~~ 385 (445)
+++..... +..+++++. ....+++ ..|+++++.+++++++.+|.++. +...+|++|++++.+ . +|++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~a~~~~~g~~~~--~~~~~g~tDa~~~~~~~gip~v~- 387 (427)
T PRK06837 312 LAAAARDDRFLSNNPPEVVWS-GFLAEGYVLEPGSEAEAALARAHAAVFGGPLR--SFVTTAYTDTRFYGLYYGIPALC- 387 (427)
T ss_pred HHHHHhcChhhhhCCCeEEEE-ecccCCcCCCCCCHHHHHHHHHHHHHhCCCCe--eeEEeeccchHHHhccCCCCEEE-
Confidence 87654321 222344431 1233344 34578999999999998788653 356789999999985 3 99775
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 386 YLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 386 ~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
|| ||+ ..+|++||+++++++.+++++|++++.+++.
T Consensus 388 -~G-----p~~-~~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~ 423 (427)
T PRK06837 388 -YG-----PSG-EGIHGFDERVDLESVRKVTKTIALFVAEWCG 423 (427)
T ss_pred -EC-----CCC-CccCCCCceEEHHHHHHHHHHHHHHHHHHhC
Confidence 56 443 4599999999999999999999999999884
No 11
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=4e-53 Score=425.93 Aligned_cols=367 Identities=18% Similarity=0.205 Sum_probs=297.7
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEeccc
Q 013332 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDA 116 (445)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~Dt 116 (445)
++++++++.++ +++++++++|++|||+|++|.+++++|.++|+++||++...+..+|+++++++++ |+|+|++|+||
T Consensus 4 ~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~~-~~i~~~~H~Dt 80 (399)
T PRK13004 4 KLILMLAEKYK--ADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHGK-KLIAFDAHIDT 80 (399)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCCC-cEEEEEeccCc
Confidence 57888999888 9999999999999999999999999999999999998654445689999997654 89999999999
Q ss_pred ccCCCCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-C-CccHHHHHHccC
Q 013332 117 LAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGA 187 (445)
Q Consensus 117 Vp~~~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g-~~G~~~l~~~~~ 187 (445)
||+++..+|+++ .++||+|||||+ |++++++|+|++.|++.+..++++|.|+|++||| + +.|++++++++.
T Consensus 81 Vp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~ 160 (399)
T PRK13004 81 VGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDK 160 (399)
T ss_pred cCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcC
Confidence 999877789653 467899999998 7999999999999999887789999999999999 3 467888888654
Q ss_pred CCCcceeEEecccCCCCCC-ceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc--cCCCC
Q 013332 188 LENVEAIFGLHVSSLFPVG-TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR--EADPL 264 (445)
Q Consensus 188 ~~~~d~~i~~~~~~~~p~g-~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~--~~~~~ 264 (445)
+ .+|++++.+ |++ .+. .+++|..+++|+++|+++|+|.|+.|.|||..+++++..|+.+... .....
T Consensus 161 ~-~~d~~i~~e-----~~~~~i~----~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~ 230 (399)
T PRK13004 161 I-KPDFVVITE-----PTDLNIY----RGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFL 230 (399)
T ss_pred C-CCCEEEEcc-----CCCCceE----EecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcC
Confidence 4 468888743 332 222 3468999999999999999999999999999999999999887532 22223
Q ss_pred CCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEec-----------cc
Q 013332 265 DSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFD-----------DK 332 (445)
Q Consensus 265 ~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~-----------~~ 332 (445)
+..+++++.|.+| .+.|+||++|++.+|+|+.|.++.+++.+++++ +.+. ...+.++++... ..
T Consensus 231 ~~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~--~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~ 306 (399)
T PRK13004 231 GKGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRA--LPAV--KKANAKVSMYNYDRPSYTGLVYPTE 306 (399)
T ss_pred CCceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHH--HHhh--ccccceEEEecccCCCccccccccc
Confidence 4568999999876 589999999999999999999999999999999 7431 122333332210 01
Q ss_pred CCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHh-h-cCeEEEEecCCCCCCCCCCCCCCCCCCCC
Q 013332 333 SFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE-A-IPGYFYYLGMNDETKGKFETGHSPYFRVN 408 (445)
Q Consensus 333 ~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~ 408 (445)
..+|++ +.++++++.+.+++++.+|.++. ....++++|++.+.+ . +|++. +| ||....+|++||++.
T Consensus 307 ~~~p~~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~~~td~~~~~~~~Gip~v~--~G-----pg~~~~aH~~nE~i~ 377 (399)
T PRK13004 307 CYFPTWLYPEDHEFVKAAVEAYKGLFGKAPE--VDKWTFSTNGVSIAGRAGIPTIG--FG-----PGKEPLAHAPNEYTW 377 (399)
T ss_pred ccccccccCCCCHHHHHHHHHHHHHhCCCCe--ecccccccCCeEEehhcCCCEEE--EC-----CCcccccCCCCceeE
Confidence 234554 35688999999999998887663 245677888877654 4 89875 56 555567999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhh
Q 013332 409 EDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 409 i~~l~~~~~~~~~~i~~l~~~ 429 (445)
++++.+++++|++++.++|+.
T Consensus 378 i~~l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 378 KEQLVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999953
No 12
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.2e-52 Score=419.67 Aligned_cols=355 Identities=19% Similarity=0.215 Sum_probs=288.6
Q ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec--cCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCcc-
Q 013332 51 WMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH- 127 (445)
Q Consensus 51 ~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~- 127 (445)
++++++++|++|||+|++|.++++||.++|+++||+++.. ++.+|+++++++ ++|+|+|+||+||||+++...|++
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 5789999999999999999999999999999999998752 356899999854 459999999999999988778954
Q ss_pred --c-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC-C-ccHHHHHHccC--CCCcceeEEe
Q 013332 128 --K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGA--LENVEAIFGL 197 (445)
Q Consensus 128 --~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~l~~~~~--~~~~d~~i~~ 197 (445)
. .++||++||||+ ||+++++|.|++.|++.+..++++|.|++++|||+ + .|++.+++... ...+|++++.
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 3 467999999998 89999999999999988777889999999999994 3 59998876421 1246887765
Q ss_pred cccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-CCCCCeeEEEEEEEc
Q 013332 198 HVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-DPLDSQVLTVAKFEG 276 (445)
Q Consensus 198 ~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~-~~~~~~t~~i~~i~g 276 (445)
++....+.+.. ...+++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+.+..+.. ..+...+++++.|+|
T Consensus 162 ep~~~~~~~~~---i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGDV---IKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCCe---EEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 43221111111 12356899999999999999999999999999999999999987642221 234557899999998
Q ss_pred CC-ccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccC-CHHHHHHHHHHHHH
Q 013332 277 GG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVN-NKNLHEHFQKVAAD 354 (445)
Q Consensus 277 G~-~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-d~~l~~~~~~a~~~ 354 (445)
|. ..|+||++|++.+|+|++|.++.+++.++|++ .++. .++++++++ ...++++.. ++++++.+.+++++
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~--~~~~----~~~~~~~~~--~~~~~p~~~~~~~~~~~l~~a~~~ 310 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEA--ILDK----HGLDYTLEW--TLSGEPFLTPPGKLVDAVVAAIEA 310 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHH--HHHh----cCCCeEEEE--ecCCCcccCCCcHHHHHHHHHHHH
Confidence 86 78999999999999999999999999999999 8763 356666665 334444433 37899999999999
Q ss_pred hcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 355 MLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 355 ~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
.+|.++. ....+|++|++++.+. +|++. || ||. ..+|++||+++++++.+++++|.+++.+|+
T Consensus 311 ~~g~~~~--~~~~~g~tda~~~~~~g~p~v~--~G-----p~~-~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 311 VTGITPE--LSTSGGTSDARFIADYGAQVVE--FG-----PVN-ATIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred HhCCCce--eeccCCCccHHHHHHcCCCeEE--ec-----cCc-ccCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 8888763 3467888999999886 78765 56 443 469999999999999999999999999886
No 13
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-52 Score=422.98 Aligned_cols=359 Identities=18% Similarity=0.197 Sum_probs=292.1
Q ss_pred HHHHHHHHHHHhCCCCCc-----chHHHHHHHHHHHHhCCCC-eeecc-------C--CceEEEEEcCC-CCcEEEEEEe
Q 013332 50 YWMVNIRRKIHENPELGF-----QEFETSKLIRAELDQMGIP-YKFPV-------A--VTGVVGYIGTG-QPPFVALRAD 113 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~-----~E~~~a~~l~~~l~~~G~~-~~~~~-------~--~~nvia~~~~~-~~p~i~l~~H 113 (445)
+++++++++|++|||+|+ +|.++++||+++|+++||+ +++.+ + ++|++++++++ ++|+|+|+||
T Consensus 5 ~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll~~H 84 (400)
T PRK13983 5 DEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWIISH 84 (400)
T ss_pred HHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEEEee
Confidence 789999999999999984 4889999999999999998 76521 1 58999999654 3479999999
Q ss_pred cccccCCCCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC-ccHHHHHH
Q 013332 114 MDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLD 184 (445)
Q Consensus 114 ~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~l~~ 184 (445)
+||||+++...|.++ .++||+|||||+ |++++++|.|+++|++.+..++++|.|+|++||| ++ .|++++++
T Consensus 85 ~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~~~ 164 (400)
T PRK13983 85 MDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYLLK 164 (400)
T ss_pred ccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHHHh
Confidence 999999887789643 467899999997 8999999999999998887899999999999999 55 58999998
Q ss_pred c--cCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHH-hhccc-
Q 013332 185 A--GALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQH-LVSRE- 260 (445)
Q Consensus 185 ~--~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~-~~~~~- 260 (445)
. +.+.+.|++++. +.++|++... ..+++|..+++|+++|+++|+|.|+.|+||+..+++++..++. +....
T Consensus 165 ~~~~~~~~~d~~i~~--~~~~~~~~~i---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 239 (400)
T PRK13983 165 KHPELFKKDDLILVP--DAGNPDGSFI---EIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEKFN 239 (400)
T ss_pred hcccccCCCCEEEEe--cCCCCCCcee---EEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 6 545567877763 3356776532 2357899999999999999999999999999999999999987 42111
Q ss_pred -CCC---CCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecc-cCC
Q 013332 261 -ADP---LDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDD-KSF 334 (445)
Q Consensus 261 -~~~---~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~-~~~ 334 (445)
..+ ....+++++.+.+| ...|+||++|++++|+|++|+++.+.+.++|++ +++..+...+.+++++... ..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~--~~~~~~~~~~~~v~~~~~~~~~~ 317 (400)
T PRK13983 240 AKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKE--IADEFEEEYGVKIEVEIVQREQA 317 (400)
T ss_pred ccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHH--HHHHhccccCcceeEEEeeccCC
Confidence 111 12347788888877 589999999999999999999999999999999 9987765556666665421 112
Q ss_pred CCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchH
Q 013332 335 YPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALP 413 (445)
Q Consensus 335 ~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~ 413 (445)
.++.+.|+++++.+.+++++.+|.++. ....+|++|++++... +|++++ | ||+ ..+|++||++.++++.
T Consensus 318 ~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~td~~~~~~~gip~v~~--G-----p~~-~~~H~~nE~v~i~~l~ 387 (400)
T PRK13983 318 PPPTPPDSEIVKKLKRAIKEVRGIEPK--VGGIGGGTVAAFLRKKGYPAVVW--S-----TLD-ETAHQPNEYAKISNLI 387 (400)
T ss_pred ccCCCCCcHHHHHHHHHHHHhcCCCce--eeeecCcHHHHHHHHcCCCEEEe--C-----Ccc-ccCCCCCceeeHHHHH
Confidence 223456788999999999998888764 3457889999999876 998765 5 444 4699999999999999
Q ss_pred HHHHHHHHHHHH
Q 013332 414 YGAALHASLATR 425 (445)
Q Consensus 414 ~~~~~~~~~i~~ 425 (445)
+++++|.+++.+
T Consensus 388 ~~~~~~~~~~~~ 399 (400)
T PRK13983 388 EDAKVFALLLLE 399 (400)
T ss_pred HHHHHHHHHHhc
Confidence 999999998753
No 14
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=8.3e-53 Score=423.23 Aligned_cols=365 Identities=19% Similarity=0.211 Sum_probs=292.2
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEeccc
Q 013332 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDA 116 (445)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~Dt 116 (445)
+++.+.++++. +++++++++|++|||+|++|.++++||.++|+++||++...+..+|++++++.+ +|+|+|+||+||
T Consensus 2 ~~~~~~i~~~~--~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~~-~~~l~l~~H~Dt 78 (395)
T TIGR03320 2 NQIKSEAKKYR--GDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDT 78 (395)
T ss_pred chHHHHHHHHH--HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCCC-CcEEEEEecccc
Confidence 36778888877 899999999999999999999999999999999999853333467999998543 489999999999
Q ss_pred ccCCCCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCC--ccHHHHHHccC
Q 013332 117 LAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG--GGAKKMLDAGA 187 (445)
Q Consensus 117 Vp~~~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~--~G~~~l~~~~~ 187 (445)
||+++..+|.++ .++||+|||||+ |++++++|.|+++|++.+..++++|.|++++|||.+ .+.++++++..
T Consensus 79 Vp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~ 158 (395)
T TIGR03320 79 VGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDG 158 (395)
T ss_pred cCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcC
Confidence 999888889654 367899999997 899999999999999887677889999999999943 34567776543
Q ss_pred CCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCC-CC
Q 013332 188 LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADP-LD 265 (445)
Q Consensus 188 ~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~-~~ 265 (445)
+ .+|++++. +|++.. ...+++|..+++|+++|+++|+|.|+.|.|||..+++++..|+++.... .++ .+
T Consensus 159 ~-~~d~~iv~-----ep~~~~---i~~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~ 229 (395)
T TIGR03320 159 I-KPEFVVIT-----EPTDMN---IYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLG 229 (395)
T ss_pred C-CCCEEEEc-----CCCccc---eEEecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccC
Confidence 3 46888763 344321 1235789999999999999999999999999999999999998874321 122 34
Q ss_pred CeeEEEEEEEcCC-ccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecc-------------
Q 013332 266 SQVLTVAKFEGGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDD------------- 331 (445)
Q Consensus 266 ~~t~~i~~i~gG~-~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~------------- 331 (445)
..+++++.|++|. ..|+||++|++.+|+|+.|+++.+++.++|++ ++... +.++++++..
T Consensus 230 ~~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 303 (395)
T TIGR03320 230 KGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRN--LPAVQ----GAEAKVEMYNYDRPSYTGLVYPT 303 (395)
T ss_pred cCceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHH--HHhhc----CCCceEeeeccCccccccccccc
Confidence 5699999999875 89999999999999999999999999999999 76432 2223333210
Q ss_pred cCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchH-HHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCC
Q 013332 332 KSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDF-SFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRV 407 (445)
Q Consensus 332 ~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~-~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v 407 (445)
...+|++ +.++++++.+++++++.+|.++. ....++++|+ +++.+. +|++. || ||+...+|++||||
T Consensus 304 ~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~G-----pg~~~~aH~~nE~v 374 (395)
T TIGR03320 304 ECYFPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FG-----PGDEDQAHAPNEKT 374 (395)
T ss_pred ccccCccccCCCCHHHHHHHHHHHHHhCCCCc--eeecceecccceehhhcCCCEEE--EC-----CCchhhccCCCcEE
Confidence 0124554 45678999999999999888663 2356777787 455555 89875 56 66667899999999
Q ss_pred CCCchHHHHHHHHHHHHHHHh
Q 013332 408 NEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 408 ~i~~l~~~~~~~~~~i~~l~~ 428 (445)
+++++.+++++|++++.++|+
T Consensus 375 ~i~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 375 WKEDLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred EHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999874
No 15
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=9.3e-53 Score=422.73 Aligned_cols=366 Identities=18% Similarity=0.196 Sum_probs=292.4
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEeccc
Q 013332 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDA 116 (445)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~Dt 116 (445)
+++.+++++++ +++++++++|++|||+|++|.++++||.++|+++||++...+..+|+++.++.+ +|+|+|+||+||
T Consensus 2 ~~~~~~~~~~~--~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~Dt 78 (395)
T TIGR03526 2 NQIKSEAEKYR--GDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDT 78 (395)
T ss_pred chHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeeccc
Confidence 36778888877 899999999999999999999999999999999999853333457999998543 489999999999
Q ss_pred ccCCCCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC--CccHHHHHHccC
Q 013332 117 LAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG--GGGAKKMLDAGA 187 (445)
Q Consensus 117 Vp~~~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg--~~G~~~l~~~~~ 187 (445)
||+++...|.++ .++||++||||+ ||+++++|+|++.|++.+..+++++.|++++|||+ +.|++++++++.
T Consensus 79 Vp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~ 158 (395)
T TIGR03526 79 VGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDK 158 (395)
T ss_pred cCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccC
Confidence 999888889654 357899999996 89999999999999988766788999999999993 456778887654
Q ss_pred CCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCC-CC
Q 013332 188 LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADP-LD 265 (445)
Q Consensus 188 ~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~-~~ 265 (445)
+ ..|++++. +|++.. ...+++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+.+.... .++ .+
T Consensus 159 ~-~~d~~i~~-----ep~~~~---i~~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 229 (395)
T TIGR03526 159 I-KPEFVVIT-----EPTDMN---IYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLG 229 (395)
T ss_pred C-CCCEEEec-----CCCCce---EEEEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccC
Confidence 4 46888763 444321 1235789999999999999999999999999999999999998875321 122 34
Q ss_pred CeeEEEEEEEcCC-ccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecc-----------cC
Q 013332 266 SQVLTVAKFEGGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDD-----------KS 333 (445)
Q Consensus 266 ~~t~~i~~i~gG~-~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~-----------~~ 333 (445)
..+++++.|++|. +.|+||++|++++|+|++|+++.+++.+.|++ +++.. ..+.++++.... ..
T Consensus 230 ~~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (395)
T TIGR03526 230 KGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRN--LPAVQ--GAEAEVEMYEYDRPSYTGLVYPTEC 305 (395)
T ss_pred ccceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHH--HHHhc--CCcceEEEecccccccccccccccc
Confidence 5799999999875 89999999999999999999999999999999 76532 112223321100 01
Q ss_pred CCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHH-HHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 013332 334 FYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS-FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNE 409 (445)
Q Consensus 334 ~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~-~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i 409 (445)
.+|++ +.++++++.+.+++++.+|..+. ....++++|++ ++.+. +|++. || ||+...+|++||||++
T Consensus 306 ~~p~~~~~~~~~~~~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~G-----pg~~~~aH~~dE~i~i 376 (395)
T TIGR03526 306 YFPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FG-----PGDEDQAHAPNEKTWK 376 (395)
T ss_pred ccCccccCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeecccceehhhcCCCEEE--EC-----CcchhhccCCCceEEH
Confidence 24444 45688999999999999888653 23566777874 55555 89875 56 6656789999999999
Q ss_pred CchHHHHHHHHHHHHHHH
Q 013332 410 DALPYGAALHASLATRYL 427 (445)
Q Consensus 410 ~~l~~~~~~~~~~i~~l~ 427 (445)
+++.+++++|++++.+++
T Consensus 377 ~~l~~~~~~~~~~~~~~~ 394 (395)
T TIGR03526 377 EDLVKAAAMYAAIPTVYL 394 (395)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999999886
No 16
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=2.9e-52 Score=422.23 Aligned_cols=369 Identities=18% Similarity=0.166 Sum_probs=297.6
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhCCCCC---cchHHHHHHHHHHHHhCCCCeeec---cCCceEEEEEcCC-C--CcEE
Q 013332 38 KFLDFAKKPEIFYWMVNIRRKIHENPELG---FQEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTG-Q--PPFV 108 (445)
Q Consensus 38 ~~~~~~~~~~~~~~~~~ll~~l~~ips~s---~~E~~~a~~l~~~l~~~G~~~~~~---~~~~nvia~~~~~-~--~p~i 108 (445)
+++++++... +++++++++|++|||+| ++|.++++||+++|+++||++++. ++++|+++++++. + +|+|
T Consensus 3 ~~~~~i~~~~--~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~l 80 (421)
T PRK08596 3 QLLEQIELRK--DELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSL 80 (421)
T ss_pred HHHHHHHhhH--HHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEE
Confidence 4677888776 89999999999999999 478899999999999999998763 3578999999543 2 3689
Q ss_pred EEEEecccccCCCCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHH
Q 013332 109 ALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAK 180 (445)
Q Consensus 109 ~l~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~ 180 (445)
+|+|||||||+++..+|+++ .++||+|||||+ ||+++++|+|+++|++.+..++++|.|+|++||| ++.|++
T Consensus 81 ll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~ 160 (421)
T PRK08596 81 IINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTL 160 (421)
T ss_pred EEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHH
Confidence 99999999999887789643 467999999998 8999999999999999887889999999999999 668999
Q ss_pred HHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEec----------CCCCCCCCCCCCHHHHHHHHH
Q 013332 181 KMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGK----------GGHAAIPQHTIDPIVAASNVI 250 (445)
Q Consensus 181 ~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~----------~~Has~p~~g~NAi~~~~~~i 250 (445)
++++++. ..|++++.+ |++... .+++|..++.++++|+ .+|++.|+.|.|||..++++|
T Consensus 161 ~~~~~~~--~~d~~i~~e-----p~~~~~----~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i 229 (421)
T PRK08596 161 QCCERGY--DADFAVVVD-----TSDLHM----QGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKII 229 (421)
T ss_pred HHHhcCC--CCCEEEECC-----CCCCcc----ccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHH
Confidence 9999864 468887743 333221 3467877777777775 479999999999999999999
Q ss_pred HHHHHhhcc-----cCC--CCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHh---
Q 013332 251 VSLQHLVSR-----EAD--PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASV--- 320 (445)
Q Consensus 251 ~~l~~~~~~-----~~~--~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~--- 320 (445)
..|+.+... ... +.+..++|++.|+||...|+||++|++.+|+|+.|+++.+++.++|++ +++.....
T Consensus 230 ~~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~--~~~~~~~~~~~ 307 (421)
T PRK08596 230 QSLQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEE--YIGKVAAADPW 307 (421)
T ss_pred HHHHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHH--HHHHHHhcChh
Confidence 999876421 011 134579999999999999999999999999999999999999999999 98764321
Q ss_pred ---hCCeEEEE---ecc--cCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecC
Q 013332 321 ---QRCNATVT---FDD--KSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGM 389 (445)
Q Consensus 321 ---~~~~~~i~---~~~--~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~ 389 (445)
....+++. ... ...+|++ +.++++++.+.+++++.+|.++. ....+++||++++... +|++.+ |
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~~--G- 382 (421)
T PRK08596 308 LRENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNAI--LDMSTTVTDGGWFAEFGIPAVIY--G- 382 (421)
T ss_pred hhhCCceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCCe--eeEEeeecchhhhhhcCCCEEEE--C-
Confidence 01122210 000 1234554 45688999999999999888662 3457789999999877 998764 5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhc
Q 013332 390 NDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLEN 430 (445)
Q Consensus 390 ~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~~ 430 (445)
||....+|++||+++++++.+++++|..++.+++..+
T Consensus 383 ----pg~~~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~~~ 419 (421)
T PRK08596 383 ----PGTLEEAHSVNEKVEIEQLIEYTKVITAFIYEWCHTK 419 (421)
T ss_pred ----CCcccccCCCCceEEHHHHHHHHHHHHHHHHHHhCCC
Confidence 5545679999999999999999999999999999654
No 17
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=3.2e-53 Score=423.58 Aligned_cols=343 Identities=20% Similarity=0.252 Sum_probs=282.0
Q ss_pred HHHHHHHhCCC---CCcchHHHHHHHHHHHHhCCCCeeec---cCCce----EEEEEcCC-CCcEEEEEEecccccCCCC
Q 013332 54 NIRRKIHENPE---LGFQEFETSKLIRAELDQMGIPYKFP---VAVTG----VVGYIGTG-QPPFVALRADMDALAMEES 122 (445)
Q Consensus 54 ~ll~~l~~ips---~s~~E~~~a~~l~~~l~~~G~~~~~~---~~~~n----via~~~~~-~~p~i~l~~H~DtVp~~~~ 122 (445)
+++++|++||| ++++|.++++||+++|+++|++++.. .+..| +++.+.+. .+|+|+|++||||||+++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 68899999999 78899999999999999999998752 12333 55555443 3589999999999999877
Q ss_pred CCCcc---c-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCccee
Q 013332 123 VEWEH---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAI 194 (445)
Q Consensus 123 ~~w~~---~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~ 194 (445)
.+|++ . .+++|++||||+ |++++++|.+++.|++.+..++++|.|+|+++|| ++.|++++++++.+.+.|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 78954 3 467899999998 8999999999999998877789999999999999 66899999998876667888
Q ss_pred EEecccCCCCCC--ceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC------CCCCC
Q 013332 195 FGLHVSSLFPVG--TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA------DPLDS 266 (445)
Q Consensus 195 i~~~~~~~~p~g--~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~------~~~~~ 266 (445)
++.+ |++ .+. .+++|..+++|+++|+++|+|.|+.|.|||..++++|.+|+++..... .....
T Consensus 162 i~~~-----~~~~~~v~----~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 232 (375)
T TIGR01910 162 LIPE-----PSGGDNIV----IGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGP 232 (375)
T ss_pred EECC-----CCCCCceE----EEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCC
Confidence 7643 332 332 357899999999999999999999999999999999999988753211 12345
Q ss_pred eeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCC---cccCCHH
Q 013332 267 QVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYP---VTVNNKN 343 (445)
Q Consensus 267 ~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~d~~ 343 (445)
++++++.|+||...|+||++|++++|+|+.|.++.+++.++|++ ++++.+...+++++++. ...+| ....+++
T Consensus 233 ~t~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 308 (375)
T TIGR01910 233 ITFNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIED--VVKALSKSDGWLYENEP--VVKWSGPNETPPDSR 308 (375)
T ss_pred ccccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHH--HHHHHhhcCcHHhhCCC--eeeecCCcCCCCCCH
Confidence 79999999999999999999999999999999999999999999 99877655566655543 22222 3456788
Q ss_pred HHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013332 344 LHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAAL 418 (445)
Q Consensus 344 l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~ 418 (445)
+++.+++++++.+|.++. ....+|++|++++.+. +|++. +| ||....+|++|||+.++++.+++++
T Consensus 309 ~~~~~~~~~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~G-----pg~~~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 309 LVKALEAIIKKVRGIEPE--VLVSTGGTDARFLRKAGIPSIV--YG-----PGDLETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred HHHHHHHHHHHHhCCCCe--EeeeccchhHHHHHHcCCcEEE--EC-----CCCccccCCCCceeEHHHHHHHhhC
Confidence 999999999998788663 3467899999999987 99876 56 4444679999999999999998864
No 18
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=8.8e-52 Score=412.57 Aligned_cols=352 Identities=20% Similarity=0.225 Sum_probs=283.4
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec--cCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCc---c
Q 013332 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE---H 127 (445)
Q Consensus 53 ~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~---~ 127 (445)
++++++|++|||+|++|.++++||+++|+++||++++. ++.+|+++++++ ++|+|+|+||+||||+++.+.|. |
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 67899999999999999999999999999999998763 346799998754 45999999999999998877895 4
Q ss_pred c-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC-C-ccHHHHHHccC--CCCcceeEEecc
Q 013332 128 K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGA--LENVEAIFGLHV 199 (445)
Q Consensus 128 ~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~l~~~~~--~~~~d~~i~~~~ 199 (445)
. .++||++||||+ ||++++++.|++.+++.+..++++|+|+|++|||+ + .|++.+++... ...+|++++.++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 3 367899999998 79999999999999887777889999999999994 3 69998875321 124688886554
Q ss_pred cCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCeeEEEEEEEcCC
Q 013332 200 SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFEGGG 278 (445)
Q Consensus 200 ~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~i~~i~gG~ 278 (445)
....+.+.. ...+++|..+++++++|+++|++.|+.|.||+..+++++..|++..... ...+...+++++.|+||.
T Consensus 161 ~~~~~~~~~---i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~ 237 (370)
T TIGR01246 161 SSVKKLGDV---IKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGT 237 (370)
T ss_pred CCcccCCce---EEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCC
Confidence 322222221 1235689999999999999999999999999999999999998764221 122355799999999996
Q ss_pred -ccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCc-ccCCHHHHHHHHHHHHHhc
Q 013332 279 -AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPV-TVNNKNLHEHFQKVAADML 356 (445)
Q Consensus 279 -~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~d~~l~~~~~~a~~~~~ 356 (445)
..|+||++|++.+|+|++|.++.+++.+.|++ +++. .++++++++ ....++ ..+++++++.+++++++.+
T Consensus 238 ~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~--~~~~----~~~~~~v~~--~~~~~p~~~~~~~~~~~~~~a~~~~~ 309 (370)
T TIGR01246 238 GANNVIPGELYVQFNLRFSTEVSDEILKQRVEA--ILDQ----HGLDYDLEW--SLSGEPFLTNDGKLIDKAREAIEETN 309 (370)
T ss_pred CCCcccCCceEEEEEEecCCCCCHHHHHHHHHH--HHHH----cCCCEEEEE--ecCCcceeCCCCHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999 7753 356666665 223333 2347889999999999987
Q ss_pred CCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 357 GVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 357 g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
|.++. ....+|++|++++... +|++. || ||. ..+|++||++.++++.+++++|++++.+|
T Consensus 310 g~~~~--~~~~~g~~d~~~~~~~g~p~~~--~G-----p~~-~~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 310 GIKPE--LSTGGGTSDGRFIALMGAEVVE--FG-----PVN-ATIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCCCc--eecCCCCchHHHHHHcCCCEEE--ec-----CCc-ccCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 87663 3467889999999887 88765 56 443 45999999999999999999999998764
No 19
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=6.4e-52 Score=415.87 Aligned_cols=349 Identities=19% Similarity=0.256 Sum_probs=281.6
Q ss_pred HHHHHHHHHHHhCCCCCcch-HHHHHHHHHHHHhCCCCeeec----cCCceEEEEEcCCCCcEEEEEEecccccCCCCCC
Q 013332 50 YWMVNIRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFP----VAVTGVVGYIGTGQPPFVALRADMDALAMEESVE 124 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E-~~~a~~l~~~l~~~G~~~~~~----~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~ 124 (445)
.++++++++|++|||+|++| .++++||.++|+++|+++++. .+++||+++++++.+|+|+|+||+||||+++ ..
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~-~~ 82 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDG-QA 82 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCC-CC
Confidence 46899999999999999887 599999999999999998752 2468999999765468999999999999875 47
Q ss_pred Cc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCC--CCccee
Q 013332 125 WE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGAL--ENVEAI 194 (445)
Q Consensus 125 w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~--~~~d~~ 194 (445)
|. |. .++||++||||+ ||+++++|+|++.|++. .++++|.|+|++||| ++.|++++++.... ...|++
T Consensus 83 W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~ 160 (385)
T PRK07522 83 WTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGC 160 (385)
T ss_pred CCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEE
Confidence 85 44 356999999997 89999999999999876 468899999999999 66899999875321 235777
Q ss_pred EEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC--C------CCC
Q 013332 195 FGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD--P------LDS 266 (445)
Q Consensus 195 i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~--~------~~~ 266 (445)
+. ++|++. .+..+++|..+++|+++|+++|+|.|+.|.||+..+++++..|+++..+... + ...
T Consensus 161 i~-----~ep~~~---~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 232 (385)
T PRK07522 161 IV-----GEPTSM---RPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPY 232 (385)
T ss_pred EE-----ccCCCC---eeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCc
Confidence 64 456543 1234578999999999999999999999999999999999999887432111 1 113
Q ss_pred eeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHH------HHHhhCCeEEEEecccCCCCcccC
Q 013332 267 QVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMK------QASVQRCNATVTFDDKSFYPVTVN 340 (445)
Q Consensus 267 ~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~ 340 (445)
++++++.|+||...|+||++|++.+|+|+.+.++.+++.++|++ .+++ .+...+++++++. ...+|++..
T Consensus 233 ~t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~--~i~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~ 308 (385)
T PRK07522 233 STLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRA--YAEAELLPEMRAVHPEAAIEFEP--LSAYPGLDT 308 (385)
T ss_pred ceeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHH--HHHhhcchhhhhhcCCCcEEEEe--ccCCCCCCC
Confidence 68999999999999999999999999999999999999999999 8876 1334566676665 445677644
Q ss_pred --CHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 013332 341 --NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAA 417 (445)
Q Consensus 341 --d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~ 417 (445)
++++++.+++++ +..+ .....+++|++++... +|++. +| ||....+|++||+|.++++.++++
T Consensus 309 ~~~~~~v~~~~~~~----~~~~---~~~~~~~td~~~~~~~gip~v~--~G-----pg~~~~~H~~~E~i~i~~l~~~~~ 374 (385)
T PRK07522 309 AEDAAAARLVRALT----GDND---LRKVAYGTEAGLFQRAGIPTVV--CG-----PGSIEQAHKPDEFVELAQLAACEA 374 (385)
T ss_pred CCCcHHHHHHHHHh----CCCC---cceEeeecchHHhccCCCCEEE--EC-----CCChhhCCCCCccccHHHHHHHHH
Confidence 467888877654 4332 1235678999999876 89876 45 555568999999999999999999
Q ss_pred HHHHHHHHHH
Q 013332 418 LHASLATRYL 427 (445)
Q Consensus 418 ~~~~~i~~l~ 427 (445)
+|..++.++.
T Consensus 375 ~~~~~~~~~~ 384 (385)
T PRK07522 375 FLRRLLASLA 384 (385)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 20
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.2e-51 Score=411.62 Aligned_cols=348 Identities=18% Similarity=0.241 Sum_probs=281.8
Q ss_pred HHHHHHHHHHHhCCCCCcch-------HHHHHHHHHHHHhCCCCeeec-----cCCceEEEEEcCCCCcEEEEEEecccc
Q 013332 50 YWMVNIRRKIHENPELGFQE-------FETSKLIRAELDQMGIPYKFP-----VAVTGVVGYIGTGQPPFVALRADMDAL 117 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E-------~~~a~~l~~~l~~~G~~~~~~-----~~~~nvia~~~~~~~p~i~l~~H~DtV 117 (445)
+++++++++|++|||+|++| .++++||.++|+++|+++++. ++++|++++++++ .++|+|+||||||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~-~~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSG-EGGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCC-CCeEEEEeeecee
Confidence 57999999999999999876 579999999999999998753 1467999999543 3689999999999
Q ss_pred cCCCCCCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCC
Q 013332 118 AMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALE 189 (445)
Q Consensus 118 p~~~~~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~ 189 (445)
|+++ ..|. |. .++||+|||||+ ||+++++|.+++.|++. .++++|.|+|++||| ++.|++++++++.++
T Consensus 84 p~~~-~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~ 160 (383)
T PRK05111 84 PFDE-GRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAIR 160 (383)
T ss_pred cCCC-CcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCCC
Confidence 9865 4674 44 467999999997 89999999999999864 467899999999999 668999999887544
Q ss_pred CcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc----cCCC--
Q 013332 190 NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR----EADP-- 263 (445)
Q Consensus 190 ~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~----~~~~-- 263 (445)
.|++++ ++|++.. +..+++|..+++|+++|+++|+|.|+.|.|||..+++++..|+.+... ...+
T Consensus 161 -~d~~i~-----~ep~~~~---~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (383)
T PRK05111 161 -PDCAII-----GEPTSLK---PVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAF 231 (383)
T ss_pred -CCEEEE-----cCCCCCc---eeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 477665 4565532 123578999999999999999999999999999999999999876421 1111
Q ss_pred -CCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cC
Q 013332 264 -LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VN 340 (445)
Q Consensus 264 -~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~ 340 (445)
...+|+|++.|+||...|+||++|++.+|+|+.|+++.+++.++|++ .+++.+..++++++++.. ...+|++ +.
T Consensus 232 ~~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~--~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 308 (383)
T PRK05111 232 TVPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLRE--ALAPVSERWPGRITVAPL-HPPIPGYECPA 308 (383)
T ss_pred CCCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHH--HHHHHHhhCCCeEEEecc-ccCCCCcCCCC
Confidence 24679999999999999999999999999999999999999999999 998877667777766531 1234543 34
Q ss_pred CHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 013332 341 NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALH 419 (445)
Q Consensus 341 d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~ 419 (445)
++++++.+++++ |.++ ...++++|+.++... +|++++ | ||....+|++||+++++++.+++++|
T Consensus 309 ~~~l~~~~~~~~----g~~~----~~~~~~~Da~~~~~~g~p~v~~--G-----~g~~~~~H~~~E~v~~~~l~~~~~i~ 373 (383)
T PRK05111 309 DHQLVRVVEKLL----GHKA----EVVNYCTEAPFIQQLGCPTLVL--G-----PGSIEQAHQPDEYLELSFIKPTRELL 373 (383)
T ss_pred CCHHHHHHHHHh----CCCC----ceeeeeccHHHHHhcCCCEEEE--C-----CCchHhCcCCCCcccHHHHHHHHHHH
Confidence 567888776553 5543 234678999998876 898764 5 44445799999999999999999999
Q ss_pred HHHHHHHHh
Q 013332 420 ASLATRYLL 428 (445)
Q Consensus 420 ~~~i~~l~~ 428 (445)
++++.+++.
T Consensus 374 ~~~~~~~~~ 382 (383)
T PRK05111 374 RQLIHHFCL 382 (383)
T ss_pred HHHHHHHhc
Confidence 999998864
No 21
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=2.6e-51 Score=413.18 Aligned_cols=360 Identities=18% Similarity=0.186 Sum_probs=283.7
Q ss_pred HHHHHHHHHHHhCCCCCcc--hHHHHHHHHHHHHhCCCCeeec---cCCceEEEEEcCC-C-CcEEEEEEecccccCCCC
Q 013332 50 YWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTG-Q-PPFVALRADMDALAMEES 122 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~--E~~~a~~l~~~l~~~G~~~~~~---~~~~nvia~~~~~-~-~p~i~l~~H~DtVp~~~~ 122 (445)
++++++|++|++|||++++ |.++++||+++|+++|++++.. ++++|++++++++ + +|+|+|+|||||||+++
T Consensus 9 ~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~- 87 (400)
T TIGR01880 9 DIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR- 87 (400)
T ss_pred HHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc-
Confidence 7789999999999999764 6889999999999999998652 3578999999543 3 38999999999999876
Q ss_pred CCCc---ccc--CCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC-ccHHHHHHccCCCCcc
Q 013332 123 VEWE---HKS--KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGALENVE 192 (445)
Q Consensus 123 ~~w~---~~~--~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~l~~~~~~~~~d 192 (445)
..|. |.. ++||+|||||+ |++++++|.|++.|++.+..++++|.|+|++||| ++ .|++++++++.+.+.|
T Consensus 88 ~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~ 167 (400)
T TIGR01880 88 EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALN 167 (400)
T ss_pred ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCc
Confidence 4675 442 36899999998 7999999999999999887889999999999999 45 5999999887665667
Q ss_pred eeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc---------cCCC
Q 013332 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR---------EADP 263 (445)
Q Consensus 193 ~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~---------~~~~ 263 (445)
..++.+.+..+|++.. ..+.+++|..+++|+++|+++|||.|. +.||+..+++++..|+++... ....
T Consensus 168 ~~~~~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 244 (400)
T TIGR01880 168 LGFALDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAI 244 (400)
T ss_pred eEEEEcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccc
Confidence 7776543222444432 234578999999999999999999864 469999999999988765210 0111
Q ss_pred CCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCC-c--ccC
Q 013332 264 LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYP-V--TVN 340 (445)
Q Consensus 264 ~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~--~~~ 340 (445)
...+|++++.|+||...|+||++|++.+|+|++|.++.+++.+.|++ +++.. ..++++++.. ....+ + ...
T Consensus 245 ~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~--~i~~~--~~~~~~~~~~--~~~~~~~~~~~~ 318 (400)
T TIGR01880 245 GDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDE--WCADA--GEGVTYEFSQ--HSGKPLVTPHDD 318 (400)
T ss_pred cccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHH--HHhcc--CCceEEEEee--cCCCCCCCCCCC
Confidence 12479999999999999999999999999999999999999999999 88753 1234444432 22222 2 234
Q ss_pred CHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 013332 341 NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALH 419 (445)
Q Consensus 341 d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~ 419 (445)
++++++.+++++++. +..+ .+....|+||++++.+. +|++. ||+.. +....+|++||++++++|.+++++|
T Consensus 319 ~~~lv~~l~~a~~~~-~~~~--~~~~~~g~tDa~~~~~~gip~v~--fgp~~---~~~~~aH~~dE~i~i~~l~~~~~~~ 390 (400)
T TIGR01880 319 SNPWWVAFKDAVKEM-GCTF--KPEILPGSTDSRYIRAAGVPALG--FSPMN---NTPVLLHDHNEFLNEAVFLRGIEIY 390 (400)
T ss_pred CCHHHHHHHHHHHHc-CCee--cceeecCcchHHHHHhCCCCeEE--ECCcc---CCcccccCCCCceEHHHHHHHHHHH
Confidence 678999999999996 6543 23467899999999987 99865 45321 1124699999999999999999999
Q ss_pred HHHHHHHH
Q 013332 420 ASLATRYL 427 (445)
Q Consensus 420 ~~~i~~l~ 427 (445)
.+++.++.
T Consensus 391 ~~~l~~~~ 398 (400)
T TIGR01880 391 QTLISALA 398 (400)
T ss_pred HHHHHHhh
Confidence 99999875
No 22
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.5e-51 Score=411.68 Aligned_cols=351 Identities=21% Similarity=0.311 Sum_probs=288.5
Q ss_pred HHHHHHHHHHHhCCCCC---cchHHHHHHHHHHHHhCCCCeeecc---C--------CceEEEEEcCCCCcEEEEEEecc
Q 013332 50 YWMVNIRRKIHENPELG---FQEFETSKLIRAELDQMGIPYKFPV---A--------VTGVVGYIGTGQPPFVALRADMD 115 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s---~~E~~~a~~l~~~l~~~G~~~~~~~---~--------~~nvia~~~~~~~p~i~l~~H~D 115 (445)
+++++++++|++|||+| .+|.++++||+++|+++||++++.. + ++|+++..++++ |+|+|+||||
T Consensus 6 ~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ill~~HlD 84 (394)
T PRK08651 6 FDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSGN-PHLHFNGHYD 84 (394)
T ss_pred HHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCCC-ceEEEEeeee
Confidence 88999999999999998 6788999999999999999987632 1 245788765444 8999999999
Q ss_pred cccCCCCCCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccC
Q 013332 116 ALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA 187 (445)
Q Consensus 116 tVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~ 187 (445)
|||+++. .|. |. .++||++||||+ |++++++|++++.|++.+ +++|.|+|++||| ++.|++++++++.
T Consensus 85 tvp~~~~-~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~~~ 160 (394)
T PRK08651 85 VVPPGEG-WSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEEGK 160 (394)
T ss_pred eecCCCC-ccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhccC
Confidence 9998753 243 44 357899999998 899999999999998764 7999999999999 5589999999875
Q ss_pred CCCcceeEEecccCCCCCC--ceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC----
Q 013332 188 LENVEAIFGLHVSSLFPVG--TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA---- 261 (445)
Q Consensus 188 ~~~~d~~i~~~~~~~~p~g--~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~---- 261 (445)
++ .|+++..+ |++ .+. .+++|..+++|+++|+++|++.|+.|.|||..+++++.+|++...+..
T Consensus 161 ~~-~d~~i~~~-----~~~~~~i~----~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~ 230 (394)
T PRK08651 161 VT-PDYVIVGE-----PSGLDNIC----IGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYE 230 (394)
T ss_pred CC-CCEEEEec-----CCCCCceE----EecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhcccc
Confidence 43 57776533 333 232 346899999999999999999999999999999999999986532111
Q ss_pred --C-CCCCeeEEEEE--EEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCC
Q 013332 262 --D-PLDSQVLTVAK--FEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYP 336 (445)
Q Consensus 262 --~-~~~~~t~~i~~--i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 336 (445)
. .....+++++. |+||.+.|+||++|++.+|+|+.|.++.+++.++|++ +++..+..++++++++. ...++
T Consensus 231 ~~~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~--~~~~~~~~~~~~~~i~~--~~~~~ 306 (394)
T PRK08651 231 YDDERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEA--LLDEVAPELGIEVEFEI--TPFSE 306 (394)
T ss_pred ccccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHH--HHHHHhhccCCCeeEEE--ecccC
Confidence 1 12346788888 9999999999999999999999999999999999999 99888777777777765 34455
Q ss_pred ccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchH
Q 013332 337 VTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALP 413 (445)
Q Consensus 337 ~~~--~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~ 413 (445)
++. .++++++.+++++++.+|.++. +....|++|+++|... +|++.| | ||....+|++||+++++++.
T Consensus 307 ~~~~~~~~~l~~~~~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~~--G-----pg~~~~~H~~~E~i~~~~l~ 377 (394)
T PRK08651 307 AFVTDPDSELVKALREAIREVLGVEPK--KTISLGGTDARFFGAKGIPTVVY--G-----PGELELAHAPDEYVEVKDVE 377 (394)
T ss_pred CccCCCCCHHHHHHHHHHHHHhCCCCc--eeeecCcccHHHHhhCCCcEEEE--C-----CCChHhcCCCCceeEHHHHH
Confidence 543 4567999999999997787663 3467899999999987 998764 5 45445799999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 013332 414 YGAALHASLATRYLL 428 (445)
Q Consensus 414 ~~~~~~~~~i~~l~~ 428 (445)
.++++|.+++.++.+
T Consensus 378 ~~~~i~~~~i~~l~~ 392 (394)
T PRK08651 378 KAAKVYEEVLKRLAK 392 (394)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998853
No 23
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=2.5e-51 Score=408.60 Aligned_cols=339 Identities=21% Similarity=0.274 Sum_probs=275.3
Q ss_pred HHHHHHHhCCCCCcch-HHHHHHHHHHHHhCCCCeeecc-----CCceEEEEEcCCCCcEEEEEEecccccCCCCCCCc-
Q 013332 54 NIRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFPV-----AVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE- 126 (445)
Q Consensus 54 ~ll~~l~~ips~s~~E-~~~a~~l~~~l~~~G~~~~~~~-----~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~- 126 (445)
+++++|++|||+|+++ .++++||.++|+++|+++++.+ +++|+++.+++..+|+|+|+|||||||+++ ..|.
T Consensus 1 ~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~-~~w~~ 79 (364)
T TIGR01892 1 EILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDD-AAWTR 79 (364)
T ss_pred ChHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCC-CcCCC
Confidence 4788999999999865 7999999999999999987632 368999999653358999999999999976 4785
Q ss_pred --cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecc
Q 013332 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHV 199 (445)
Q Consensus 127 --~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~ 199 (445)
|. .++||+|||||+ |++++++|+++++|++. .++++|.|+|++||| ++.|++++++++.+ ..|++++
T Consensus 80 ~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~--- 153 (364)
T TIGR01892 80 DPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAII--- 153 (364)
T ss_pred CCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEE---
Confidence 44 477899999995 89999999999999875 468899999999999 66899999998753 4677765
Q ss_pred cCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-----CC--CCCeeEEEE
Q 013332 200 SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-----DP--LDSQVLTVA 272 (445)
Q Consensus 200 ~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~-----~~--~~~~t~~i~ 272 (445)
++|++.... .+++|..+++|+++|+++|++.|+.|.|||..+++++.+|+++..... .+ ...++++++
T Consensus 154 --~ep~~~~~~---~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (364)
T TIGR01892 154 --GEPTRLIPV---RAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIG 228 (364)
T ss_pred --CCCCCceeE---EeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEe
Confidence 456665432 246899999999999999999999999999999999999987642211 01 124799999
Q ss_pred EEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHH-hhCCeEEEEecccCCCCcc--cCCHHHHHHHH
Q 013332 273 KFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQAS-VQRCNATVTFDDKSFYPVT--VNNKNLHEHFQ 349 (445)
Q Consensus 273 ~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~ 349 (445)
.|+||...|+||++|++.+|+|++|.++.+++.+.|++ +++..+. .++++++++. ...+|++ +.|+++++.++
T Consensus 229 ~i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~--~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~v~~~~ 304 (364)
T TIGR01892 229 VIQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLET--IAQALVRDEPGFEVQIEV--VSTDPGVNTEPDAELVAFLE 304 (364)
T ss_pred eeecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHH--HHHHHHhhCCCceEEEEE--ccCCCCcCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999 8877542 4566676665 3445554 45677888876
Q ss_pred HHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013332 350 KVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 423 (445)
Q Consensus 350 ~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i 423 (445)
+++ |.++ ...+++||++++... +|++. +| ||....+|++|||++++++.+++++|+.++
T Consensus 305 ~~~----~~~~----~~~~~~tD~~~~~~~gip~v~--~G-----pg~~~~~H~~~E~i~i~~l~~~~~~~~~~~ 364 (364)
T TIGR01892 305 ELS----GNAP----EVVSYGTEAPQFQELGAEAVV--CG-----PGDIRQAHQPDEYVEIEDLVRCRAVLARLV 364 (364)
T ss_pred HHh----CCCC----ceecccccHHHHHhCCCcEEE--EC-----CCChHhCCCCCceeeHHHHHHHHHHHHHhC
Confidence 543 5433 235678999999887 99876 45 555567999999999999999999998763
No 24
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=4.8e-51 Score=414.97 Aligned_cols=361 Identities=15% Similarity=0.196 Sum_probs=282.6
Q ss_pred HHHHHHHHHHHhCCCCCcc-h--HHHHHHHHHHHHhCCCCeeec--cCCceEEEEEcCCCCcEEEEEEecccccCCCCCC
Q 013332 50 YWMVNIRRKIHENPELGFQ-E--FETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVE 124 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~-E--~~~a~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~ 124 (445)
+.+++++++|++|||+|++ | .++++||.++|+++||++++. .+++|++++++++.+|+|+|+||+||||+++.+.
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 5689999999999999964 3 789999999999999998763 3578999999654468999999999999987778
Q ss_pred Cccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccC-CCCcceeE
Q 013332 125 WEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA-LENVEAIF 195 (445)
Q Consensus 125 w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~-~~~~d~~i 195 (445)
|.++ .++||+|||||+ ||+++++|.|++.|++.+ .++++|.|+|++||| |+.|+++++++.. ..+.|++|
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi 160 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVI 160 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHhCCCEEE
Confidence 9643 467999999998 899999999999887654 678999999999999 7789988887621 12467877
Q ss_pred EecccCCCCCCceeeccCcccccceEEEEEEEe--cCCCCCCCCCCCCHHHHHHHHHHHHHHhhc---------------
Q 013332 196 GLHVSSLFPVGTVASRPGPTLAAGGFFEAVING--KGGHAAIPQHTIDPIVAASNVIVSLQHLVS--------------- 258 (445)
Q Consensus 196 ~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G--~~~Has~p~~g~NAi~~~~~~i~~l~~~~~--------------- 258 (445)
+. +....+.+...+ ..+++|..|++++++| +++|||.|+.|.|||..+++++.+|++...
T Consensus 161 ~E-~~~~~~~~~~~i--~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (436)
T PRK06446 161 ME-GAGLDPKGRPQI--VLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELT 237 (436)
T ss_pred EC-CCCccCCCCeEE--EEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCC
Confidence 53 211112332111 2467899999999999 999999999999999999999999975420
Q ss_pred -------cc------------------C--------CCCCCeeEEEEEEEcC----CccccccCcEEEEEEEecCChhhH
Q 013332 259 -------RE------------------A--------DPLDSQVLTVAKFEGG----GAFNIIPDSVTIGGTFRAFSKESI 301 (445)
Q Consensus 259 -------~~------------------~--------~~~~~~t~~i~~i~gG----~~~NviP~~a~~~~diR~~~~~~~ 301 (445)
+. . .....+++|++.|+|| ...|+||++|++++|+|++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~ 317 (436)
T PRK06446 238 EEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDP 317 (436)
T ss_pred HHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCH
Confidence 00 0 0122478999999987 467999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHh-
Q 013332 302 IQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE- 378 (445)
Q Consensus 302 ~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~- 378 (445)
+++.+.|++ ++++. +..+++.+ ...++++ +.++++++.+++++++.+|.++... ...+|++|+++|.+
T Consensus 318 ~~v~~~l~~--~~~~~----~~~~~~~~--~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~~-~~~~g~~d~~~~~~~ 388 (436)
T PRK06446 318 YKIFELLKK--HLQKV----GFNGEIIV--HGFEYPVRTSVNSKVVKAMIESAKRVYGTEPVVI-PNSAGTQPMGLFVYK 388 (436)
T ss_pred HHHHHHHHH--HHHHc----CCCeEEEE--cCCcceeecCCCCHHHHHHHHHHHHHhCCCCcee-cCCCCcchHHHHHHH
Confidence 999999999 87652 23455554 3334443 4568899999999999988876322 23456678888865
Q ss_pred h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 379 A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 379 ~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
. +|++++++|+.. + ...+|++||||+++++..++++|.+++.++.
T Consensus 389 ~gip~v~~~~g~g~---~-~~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 389 LGIRDIVSAIGVGG---Y-YSNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred hCCCcceeecccCC---C-CcCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 3 898765566432 2 2579999999999999999999999998764
No 25
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=8e-51 Score=416.01 Aligned_cols=372 Identities=15% Similarity=0.133 Sum_probs=286.4
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCc------chHHHHHHHHHHHHhCCCC-eee--ccCCceEEEEEcCC-CCc
Q 013332 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGF------QEFETSKLIRAELDQMGIP-YKF--PVAVTGVVGYIGTG-QPP 106 (445)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~------~E~~~a~~l~~~l~~~G~~-~~~--~~~~~nvia~~~~~-~~p 106 (445)
+++.++++++. ++++++|++|++|||+|+ +|.++++||+++|+++||+ +++ ..+++|+++++.++ ++|
T Consensus 3 ~~~~~~~~~~~--~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~ 80 (456)
T PRK08201 3 QQVEAYLRERR--EAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKP 80 (456)
T ss_pred hHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 57888888888 999999999999999995 5678999999999999997 444 23567899988543 458
Q ss_pred EEEEEEecccccCCCCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCcc
Q 013332 107 FVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGG 178 (445)
Q Consensus 107 ~i~l~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G 178 (445)
+|+|+||+||||+++...|.++ .++||+|||||+ ||+++++|.|++.|++.+..++++|.|++++||| ++.|
T Consensus 81 ~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g 160 (456)
T PRK08201 81 TVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPN 160 (456)
T ss_pred EEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCcc
Confidence 9999999999999876679643 577999999998 8999999999999987666788899999999999 6789
Q ss_pred HHHHHHccC-CCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCC--CCCCCCC-CCCHHHHHHHHHHHHH
Q 013332 179 AKKMLDAGA-LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGG--HAAIPQH-TIDPIVAASNVIVSLQ 254 (445)
Q Consensus 179 ~~~l~~~~~-~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~--Has~p~~-g~NAi~~~~~~i~~l~ 254 (445)
+..++++.. .-..|++++.++....+.. - ....++||..+++|+++|+++ |||.|.. +.|||..++++|.+|+
T Consensus 161 ~~~~l~~~~~~~~~d~~ii~e~~~~~~~~-~--~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~ 237 (456)
T PRK08201 161 LDSFVEEEKDKLAADVVLISDTTLLGPGK-P--AICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLH 237 (456)
T ss_pred HHHHHHhhHHhccCCEEEEeCCCcCCCCC-E--EEEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcC
Confidence 998887532 1135777765432211111 1 123568999999999999998 9997654 5799999999999997
Q ss_pred Hhhccc-----------------------------------CCC-------------CCCeeEEEEEEEcCCc----ccc
Q 013332 255 HLVSRE-----------------------------------ADP-------------LDSQVLTVAKFEGGGA----FNI 282 (445)
Q Consensus 255 ~~~~~~-----------------------------------~~~-------------~~~~t~~i~~i~gG~~----~Nv 282 (445)
++..+. ..+ ...+|+|++.|+||.. .|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~Nv 317 (456)
T PRK08201 238 DEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTV 317 (456)
T ss_pred CCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceE
Confidence 532100 000 0135899999998754 799
Q ss_pred ccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCCcc
Q 013332 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQN 360 (445)
Q Consensus 283 iP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~ 360 (445)
||++|++++|+|+.|+++.+++.++|++ +++... ..+.++++.. ...+|++ +.++++++.+++++++.+|.++
T Consensus 318 VP~~a~~~~diR~~p~~~~e~v~~~i~~--~l~~~~-~~~~~v~~~~--~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~ 392 (456)
T PRK08201 318 IPAEAHAKITCRLVPDQDPQEILDLIEA--HLQAHT-PAGVRVTIRR--FDKGPAFVAPIDHPAIQAAARAYEAVYGTEA 392 (456)
T ss_pred ECcceEEEEEEEeCCCCCHHHHHHHHHH--HHHHhC-CCCeEEEEEE--CCCcCceecCCCCHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999999999999 886532 2334455443 2344554 4567899999999999888865
Q ss_pred cccCCCCCccc---hHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 361 IKENRPLMGTE---DFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 361 ~~~~~~~~g~t---D~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
.. . ..|++ |+.++... +|++++|+|. ....+|++||||+++++.+++++|.+++.++.
T Consensus 393 ~~--~-~~gg~~~~~~~~~~~~gip~v~~GpG~------~~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 393 AF--T-RMGGSIPVVETFSSQLHIPIVLMGFGL------PSENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred ee--c-CCCCcHHHHHHHHHHhCCCEEEecCCC------CCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 32 2 23344 56666555 8988754331 12569999999999999999999999998874
No 26
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=9.4e-51 Score=417.06 Aligned_cols=358 Identities=18% Similarity=0.173 Sum_probs=283.5
Q ss_pred HHHHHHHHHHHhCCCCC--cchHHHHHHHHHHHHhCCCCee---e---ccCCceEEEEEcCC-CCcEEEEEEecccccCC
Q 013332 50 YWMVNIRRKIHENPELG--FQEFETSKLIRAELDQMGIPYK---F---PVAVTGVVGYIGTG-QPPFVALRADMDALAME 120 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s--~~E~~~a~~l~~~l~~~G~~~~---~---~~~~~nvia~~~~~-~~p~i~l~~H~DtVp~~ 120 (445)
+++++++++|++|||++ ++|.++++||.++|+++|++++ . .++++|+++++++. ++|+|+|+|||||||++
T Consensus 37 ~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp~~ 116 (472)
T PRK09133 37 QAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVEAK 116 (472)
T ss_pred HHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCCCC
Confidence 77999999999999998 7789999999999999999864 2 23478999999553 45889999999999987
Q ss_pred CCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC-ccHHHHHHccC-CCC
Q 013332 121 ESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGA-LEN 190 (445)
Q Consensus 121 ~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~l~~~~~-~~~ 190 (445)
+ .+|.++ .++||+|||||+ ||+++++|.++++|++.+..++++|.|++++||| ++ .|+++++++.. ..+
T Consensus 117 ~-~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~ 195 (472)
T PRK09133 117 R-EDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLID 195 (472)
T ss_pred h-hcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhccC
Confidence 5 368654 467899999998 8999999999999998877889999999999999 44 79999987643 114
Q ss_pred cceeEEecccC------CCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc----
Q 013332 191 VEAIFGLHVSS------LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE---- 260 (445)
Q Consensus 191 ~d~~i~~~~~~------~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~---- 260 (445)
.|++|+ ++.. ++|+.. ....++||..+++|+++|+++|||.|+ +.|||..++++|.+|+++..+.
T Consensus 196 ~~~~i~-e~~~~~~~~~gept~~---~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~~ 270 (472)
T PRK09133 196 AEFALN-EGGGGTLDEDGKPVLL---TVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLND 270 (472)
T ss_pred eEEEEE-CCCccccCCCCCceEE---EeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccCC
Confidence 577776 4432 334322 234578999999999999999999997 5899999999999998642100
Q ss_pred ------------------------------------------CCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCCh
Q 013332 261 ------------------------------------------ADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSK 298 (445)
Q Consensus 261 ------------------------------------------~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~ 298 (445)
..+...+|+|++.|+||...|+||++|++++|+|++|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p~ 350 (472)
T PRK09133 271 VTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFPG 350 (472)
T ss_pred ccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCCc
Confidence 00023579999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhHHHHHHHHHhhCCeEEEEeccc-CCCCcccCCHHHHHHHHHHHHHhc-CCcccccCCCCCccchHHHH
Q 013332 299 ESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDK-SFYPVTVNNKNLHEHFQKVAADML-GVQNIKENRPLMGTEDFSFF 376 (445)
Q Consensus 299 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~d~~l~~~~~~a~~~~~-g~~~~~~~~~~~g~tD~~~~ 376 (445)
++.+++.++|++ +++. .+ ++++.... ...++.+.+.++++.+++++++.+ |.++ .+..++|+||++++
T Consensus 351 ~~~e~v~~~I~~--~i~~----~~--v~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~--~~~~~~ggtDa~~~ 420 (472)
T PRK09133 351 DTIEAVRATLKQ--VVAD----PA--IKITRIGDPSPSPASPLRPDIMKAVEKLTAAMWPGVPV--IPSMSTGATDGRYL 420 (472)
T ss_pred hhHHHHHHHHHH--HhcC----CC--EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHHCCCCce--eccccccccchHHH
Confidence 999999999999 7753 23 34433111 122234556789999999999887 5443 23467899999999
Q ss_pred Hhh-cCeEEEE--ecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 377 AEA-IPGYFYY--LGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 377 ~~~-ip~~~~~--~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
... +|++.++ || |+....+|++||||+++++.+++++|.+++.+++.
T Consensus 421 ~~~gip~~~~~~i~g-----p~~~~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 421 RAAGIPTYGVSGLFG-----DPDDTFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred HhcCCCceeecCccc-----CcccccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 876 8875321 34 45557799999999999999999999999988864
No 27
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.1e-50 Score=401.28 Aligned_cols=338 Identities=15% Similarity=0.121 Sum_probs=274.4
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc--CCceEEEEEcCCCCcEEEEEEecccccCCCCCCCcc
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV--AVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~--~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~ 127 (445)
+++++++++|++|||+|++|.++++||.++|+++||+++... +..|+++ + ++|+|+|+|||||||.+.. +
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~---~-~~~~i~l~~H~D~vp~~~~---~- 73 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV---N-SKAELFVEVHYDTVPVRAE---F- 73 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc---C-CCCEEEEEccccccCCCCC---C-
Confidence 568999999999999999999999999999999999988643 2456665 2 3589999999999997532 1
Q ss_pred ccCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCC
Q 013332 128 KSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLF 203 (445)
Q Consensus 128 ~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~ 203 (445)
.++||++||||+ |++++++|.|++.|++. .++++|.|+|++||| ++.|++.+++.. ..|++++.+
T Consensus 74 -~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~e----- 142 (347)
T PRK08652 74 -FVDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLE----- 142 (347)
T ss_pred -EEECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEec-----
Confidence 256899999998 89999999999999854 346799999999999 678999998763 347777654
Q ss_pred CCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccc
Q 013332 204 PVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNII 283 (445)
Q Consensus 204 p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~Nvi 283 (445)
|++. ....+++|..+++|+++|+++|++.|+.|.|||..+++++..|+++......... .+++++.|+||...|+|
T Consensus 143 p~~~---~i~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~-~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 143 PTDL---KVAIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYFD-PHIGIQEIIGGSPEYSI 218 (347)
T ss_pred CCCC---ceeeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhcccC-CCCcceeeecCCCCCcc
Confidence 3321 1234678999999999999999999999999999999999999887532211111 35778889999999999
Q ss_pred cCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCccccc
Q 013332 284 PDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKE 363 (445)
Q Consensus 284 P~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~ 363 (445)
|++|++++|+|+++.++.+++.+++++ ++++ .++++++.. ..+..+...|+++++.+++++++. |.++.
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~--~~~~----~~v~~~~~~--~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~-- 287 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDP--ILDE----YTVKYEYTE--IWDGFELDEDEEIVQLLEKAMKEV-GLEPE-- 287 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHH--HHHh----cCceEEEec--cCCcccCCCCCHHHHHHHHHHHHh-CCCCC--
Confidence 999999999999999999999999999 7753 344554432 211122356788999999999998 88763
Q ss_pred CCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 364 NRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 364 ~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
+...+|+||+++|.+. +|++. || ||....+|++|||++++++.+++++|.+++..+++
T Consensus 288 ~~~~~g~tDa~~~~~~gip~v~--~G-----pg~~~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 288 FTVMRSWTDAINFRYNGTKTVV--WG-----PGELDLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred cCcCCccchhHHHHHCCCCEEE--EC-----CCchhhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 3467889999999887 99875 56 55556799999999999999999999999999875
No 28
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=2.5e-50 Score=398.24 Aligned_cols=330 Identities=12% Similarity=0.085 Sum_probs=269.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCcccc
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKS 129 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~~~ 129 (445)
+++++++++|++|||+|++|.++++||.++|+++|+++++.+ .+|++. .+ +|+|+|+||+||||. |....
T Consensus 10 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~-~~~~~~--~g--~~~lll~gH~DtVp~-----~~~~~ 79 (346)
T PRK00466 10 QKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILP-DSNSFI--LG--EGDILLASHVDTVPG-----YIEPK 79 (346)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEec-CCCcEe--cC--CCeEEEEeccccCCC-----CCCce
Confidence 668999999999999999999999999999999999988654 456653 22 378999999999994 22224
Q ss_pred CCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCC
Q 013332 130 KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPV 205 (445)
Q Consensus 130 ~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~ 205 (445)
++||+|||||+ ||+++++++|+++|++.+ .++.|+|++||| ++.|++++++++. ++|++++ ++|+
T Consensus 80 ~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~-----~ep~ 148 (346)
T PRK00466 80 IEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIV-----GEPS 148 (346)
T ss_pred eeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEE-----cCCC
Confidence 67899999998 899999999999998764 468999999999 5689999998863 4687776 3455
Q ss_pred CceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccC
Q 013332 206 GTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPD 285 (445)
Q Consensus 206 g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~ 285 (445)
+...+ ..+++|..+++|+++|+++|+|.|+ .|||..+++++.+|++... .....+++++.|+||...|+||+
T Consensus 149 ~~~~i--~~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~----~~~~~t~~~~~i~gG~~~NvvP~ 220 (346)
T PRK00466 149 NGTDI--VVEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQPE----NYDKPSIVPTIIRAGESYNVTPA 220 (346)
T ss_pred CCCce--EEEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhccc----cCCCCcceeeEEecCCcCcccCC
Confidence 53211 2358899999999999999999886 5999999999999977532 23357899999999999999999
Q ss_pred cEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCCccccc
Q 013332 286 SVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKE 363 (445)
Q Consensus 286 ~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~ 363 (445)
+|++++|+|+.|+++.+++.++|++ .++. +++++ ...++++ +.++++++.+.+++++. |.++.
T Consensus 221 ~a~~~~diR~~p~~~~~~v~~~i~~--~~~~------~~~~~----~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~-- 285 (346)
T PRK00466 221 KLYLHFDVRYAINNKRDDLISEIKD--KFQE------CGLKI----VDETPPVKVSINNPVVKALMRALLKQ-NIKPR-- 285 (346)
T ss_pred ceEEEEEEEeCCCCCHHHHHHHHHH--HHhh------CcEee----ccCCCCcccCCCCHHHHHHHHHHHHh-CCCce--
Confidence 9999999999999999999999999 7753 23332 2234444 44688999999999986 87653
Q ss_pred CCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 364 NRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 364 ~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
....+|+||+++|.+..|.++ .|| ||....+|++|||++++++.+++++|++++.+++++
T Consensus 286 ~~~~~g~tD~~~~~~~~~~~v-~fG-----pg~~~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~ 345 (346)
T PRK00466 286 LVRKAGTSDMNILQKITTSIA-TYG-----PGNSMLEHTNQEKITLDEIYIAVKTYMLAIEELWQK 345 (346)
T ss_pred EEecCCcCcHHHHHHhCCCEE-EEC-----CCCcccccCCCceeeHHHHHHHHHHHHHHHHHHHhc
Confidence 346788999999998744332 367 666678999999999999999999999999998764
No 29
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=1.7e-49 Score=395.62 Aligned_cols=346 Identities=18% Similarity=0.119 Sum_probs=273.4
Q ss_pred HHHHHHHHHHHhCCCCCcchH---HHHHHHHHHHHhCCCCeeecc---C-CceEEEEEcCC--CCcEEEEEEecccccCC
Q 013332 50 YWMVNIRRKIHENPELGFQEF---ETSKLIRAELDQMGIPYKFPV---A-VTGVVGYIGTG--QPPFVALRADMDALAME 120 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~---~~a~~l~~~l~~~G~~~~~~~---~-~~nvia~~~~~--~~p~i~l~~H~DtVp~~ 120 (445)
++++++|++|++|||+|++|. ++++||.++|+++|++++..+ + ..|+++++++. .+|+|+|+|||||||+.
T Consensus 11 ~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~~ 90 (376)
T PRK07473 11 EAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHPV 90 (376)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCCC
Confidence 789999999999999999886 677899999999999988632 2 24799998642 35899999999999754
Q ss_pred C-CCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeE
Q 013332 121 E-SVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIF 195 (445)
Q Consensus 121 ~-~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i 195 (445)
+ ...+||. ++||+|||||+ ||+++++|.|+++|++.+..++++|.|+|++||| ++.|++.+++++.. ..|++|
T Consensus 91 ~~~~~~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~i 168 (376)
T PRK07473 91 GTLEKLPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYVL 168 (376)
T ss_pred CCccCCCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEEE
Confidence 3 1223553 67899999996 8999999999999998876778899999999999 67899999987543 468888
Q ss_pred EecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEE
Q 013332 196 GLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKF 274 (445)
Q Consensus 196 ~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i 274 (445)
+.++ +...+.+. .+++|..+++|+++|+++|+| .|+.|+|||..+++++.+|+++.. ...++|++.|
T Consensus 169 v~ep--~~~~~~v~----~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg~i 236 (376)
T PRK07473 169 VPEP--GRPDNGVV----TGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVGIV 236 (376)
T ss_pred EeCC--CCCCCCEE----EECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEeeE
Confidence 7543 22222332 357899999999999999987 799999999999999999988742 2368999999
Q ss_pred EcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccC---CHHHHHHHHHH
Q 013332 275 EGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVN---NKNLHEHFQKV 351 (445)
Q Consensus 275 ~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---d~~l~~~~~~a 351 (445)
+||...|+||++|++++|+|....+..+++.+++.+ .++ ...++++++.. ....|++.. ++++++.++++
T Consensus 237 ~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~--~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~ 309 (376)
T PRK07473 237 HGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLA--LSG---TEDDVTFTVTR--GVTRPVWEPDAGTMALYEKARAI 309 (376)
T ss_pred EcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHH--hhC---cCCCeEEEEEc--cccCCCCCCChhHHHHHHHHHHH
Confidence 999999999999999999999888887777777766 543 22344555442 223444432 24688888877
Q ss_pred HHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 352 AADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 352 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
.+.. |.++. ....+|+||+++++.. +|++. ++| ||. ..+|++|||+++++|.+++++|++++.++
T Consensus 310 ~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~-g~G-----pg~-~~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 310 AGQL-GLSLP--HGSAGGGSDGNFTGAMGIPTLD-GLG-----VRG-ADYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred HHHc-CCCCc--cccCccccHhhhHHhcCCCEEE-ecc-----CCC-CCCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 6664 87653 3567899999999876 99875 567 443 46899999999999999999999998653
No 30
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-50 Score=414.87 Aligned_cols=370 Identities=14% Similarity=0.131 Sum_probs=282.2
Q ss_pred cCchhHHHHHHHHHHHHhCCCCCcchH---------HHHHHHHHHHHhCCCCeeec-cCCceEEEEEcC-CCC-cEEEEE
Q 013332 44 KKPEIFYWMVNIRRKIHENPELGFQEF---------ETSKLIRAELDQMGIPYKFP-VAVTGVVGYIGT-GQP-PFVALR 111 (445)
Q Consensus 44 ~~~~~~~~~~~ll~~l~~ips~s~~E~---------~~a~~l~~~l~~~G~~~~~~-~~~~nvia~~~~-~~~-p~i~l~ 111 (445)
..++ +++++++++|++|||+|++|. ++++||+++|+.+|++++.. .+..|+++.+.+ +++ |+|+|+
T Consensus 40 ~~~~--~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~ 117 (486)
T PRK08262 40 AVDE--DAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLM 117 (486)
T ss_pred cCCH--HHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEE
Confidence 3445 889999999999999998763 48999999999999987652 223678888744 333 899999
Q ss_pred EecccccCCCC--CCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHH
Q 013332 112 ADMDALAMEES--VEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKK 181 (445)
Q Consensus 112 ~H~DtVp~~~~--~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~ 181 (445)
||+||||+++. ..|. |. .++||+|||||+ ||+++++|.|++.|++.+..++++|.|+|++||| ++.|+++
T Consensus 118 gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~ 197 (486)
T PRK08262 118 AHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARA 197 (486)
T ss_pred CcccccCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHH
Confidence 99999998753 4694 54 567899999996 8999999999999998877889999999999999 6689998
Q ss_pred HHHccCC--CCcceeE------Eecc--cCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 013332 182 MLDAGAL--ENVEAIF------GLHV--SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIV 251 (445)
Q Consensus 182 l~~~~~~--~~~d~~i------~~~~--~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~ 251 (445)
+++.... ...|+++ ..++ ...+|++.+ +.+++|..+++|+++|+++|||.|+. .|||..++++|.
T Consensus 198 l~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~i----~~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~ 272 (486)
T PRK08262 198 IAELLKERGVRLAFVLDEGGAITEGVLPGVKKPVALI----GVAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALT 272 (486)
T ss_pred HHHHHHHhcCCEEEEEeCCceecccccCCCCceEEee----EEeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHH
Confidence 8763110 1234432 2111 113344433 34578999999999999999999998 999999999999
Q ss_pred HHHHhhccc--------------------------------------------CCCCCCeeEEEEEEEcCCccccccCcE
Q 013332 252 SLQHLVSRE--------------------------------------------ADPLDSQVLTVAKFEGGGAFNIIPDSV 287 (445)
Q Consensus 252 ~l~~~~~~~--------------------------------------------~~~~~~~t~~i~~i~gG~~~NviP~~a 287 (445)
+|++...+. ......+|+|++.|+||...|+||++|
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a 352 (486)
T PRK08262 273 RLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRA 352 (486)
T ss_pred HHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCcc
Confidence 998631000 001235799999999999999999999
Q ss_pred EEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCC
Q 013332 288 TIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPL 367 (445)
Q Consensus 288 ~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~ 367 (445)
++++|+|++|+++.+++.++|++ +++.. ++++++......+.+...+++++++.+++++++.+|.... .+...
T Consensus 353 ~~~~diR~~p~~~~~~i~~~i~~--~~~~~----~~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~ 425 (486)
T PRK08262 353 TATVNFRILPGDSVESVLAHVRR--AVADD----RVEIEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLV 425 (486)
T ss_pred EEEEEEEeCCCCCHHHHHHHHHH--HhccC----ceEEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-cccee
Confidence 99999999999999999999999 87642 3444433210112233456788999999999998774222 22357
Q ss_pred CccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 368 MGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 368 ~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
.|+||+++|....|.++. +++....||+...+|++||+++++++.+++++|.+++.+++.
T Consensus 426 ~g~tDa~~~~~~~p~~~~-~~~~~~gpg~~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 426 VGATDSRHYSGISDNVYR-FSPLRLSPEDLARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred cccccHHHHHHhcCCeEE-ECCccCCcccccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 789999999887776543 332222266667899999999999999999999999988753
No 31
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-49 Score=405.72 Aligned_cols=370 Identities=16% Similarity=0.163 Sum_probs=286.2
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCcc------hHHHHHHHHHHHHhCCC-Ceeec--cCCceEEEEEcCC-CC
Q 013332 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ------EFETSKLIRAELDQMGI-PYKFP--VAVTGVVGYIGTG-QP 105 (445)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~------E~~~a~~l~~~l~~~G~-~~~~~--~~~~nvia~~~~~-~~ 105 (445)
.+++.++++++. +++++++++|++|||+|++ |.++++||.++|+++|| ++++. ++++|++++++++ ++
T Consensus 6 ~~~~~~~i~~~~--~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~ 83 (449)
T PRK07907 6 ADDLRARVAELL--PRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGA 83 (449)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCC
Confidence 457889999887 9999999999999999963 67899999999999998 67763 4678999999654 35
Q ss_pred cEEEEEEecccccCCCCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCc
Q 013332 106 PFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (445)
Q Consensus 106 p~i~l~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~ 177 (445)
|+|+|+||+||||+++..+|.++ .++||+|||||+ ||+++++|.|+++| +.+++++|.|++++||| |+.
T Consensus 84 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~ 160 (449)
T PRK07907 84 PTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSP 160 (449)
T ss_pred CEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCc
Confidence 89999999999999887789654 467999999998 89999999999998 34677899999999999 678
Q ss_pred cHHHHHHccC-CCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEE--ecCCCCCC-CCCCCCHHHHHHHHHHHH
Q 013332 178 GAKKMLDAGA-LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVIN--GKGGHAAI-PQHTIDPIVAASNVIVSL 253 (445)
Q Consensus 178 G~~~l~~~~~-~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~--G~~~Has~-p~~g~NAi~~~~~~i~~l 253 (445)
|+++++++.. ..+.|++++.++... ..+...+ ..++||..+++++++ |+++|||. +..+.|||..+++++.+|
T Consensus 161 g~~~~l~~~~~~~~~d~~iv~E~~~~-~~~~p~i--~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l 237 (449)
T PRK07907 161 SLERLLAEHPDLLAADVIVIADSGNW-SVGVPAL--TTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATL 237 (449)
T ss_pred cHHHHHHhchHhhcCCEEEEecCCcC-CCCCeEE--EEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhh
Confidence 9999988632 124577777543211 0111111 245899999999998 89999997 466899999999999999
Q ss_pred HHhhccc-------CCC---------------------------------CCCeeEEEEEEEc---CCccccccCcEEEE
Q 013332 254 QHLVSRE-------ADP---------------------------------LDSQVLTVAKFEG---GGAFNIIPDSVTIG 290 (445)
Q Consensus 254 ~~~~~~~-------~~~---------------------------------~~~~t~~i~~i~g---G~~~NviP~~a~~~ 290 (445)
++...+. ..+ ...++++++.|+| |.+.|+||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~ 317 (449)
T PRK07907 238 HDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARAR 317 (449)
T ss_pred CCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEE
Confidence 7642110 000 1246899999986 46889999999999
Q ss_pred EEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCC
Q 013332 291 GTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLM 368 (445)
Q Consensus 291 ~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~ 368 (445)
+|+|+.|+++.+++.+.|++ +++... .++.+++++. ...++++ +.++++++.+++++++.+|.++. ....+
T Consensus 318 ~diR~~p~~~~e~v~~~l~~--~l~~~~-~~~~~~~~~~--~~~~~p~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~ 390 (449)
T PRK07907 318 LSLRVAPGQDAAEAQDALVA--HLEAHA-PWGAHVTVER--GDAGQPFAADASGPAYDAARAAMREAWGKDPV--DMGMG 390 (449)
T ss_pred EEEEcCCCCCHHHHHHHHHH--HHHhcC-CCCcEEEEEE--CCCcCceeCCCCCHHHHHHHHHHHHHhCCCce--ecCCC
Confidence 99999999999999999999 887532 2245566654 3334444 45788999999999999898763 23344
Q ss_pred ccchH-HHHHhh---cCeEEEEecCCCCCCCCC-CCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 369 GTEDF-SFFAEA---IPGYFYYLGMNDETKGKF-ETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 369 g~tD~-~~~~~~---ip~~~~~~G~~~~~pG~~-~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
|+++. +.|.+. +|++. +| ||+. ..+|++||+|+++++.+++++|++++.++.
T Consensus 391 g~~~~~~~~~~~~~~~~~v~--~G-----pg~~~~~aH~~nE~i~i~~l~~~~~~~~~~l~~~~ 447 (449)
T PRK07907 391 GSIPFIAELQEAFPQAEILV--TG-----VEDPKTRAHSPNESVHLGELERAAVAEALLLARLA 447 (449)
T ss_pred CcHHHHHHHHHhcCCCcEEE--ec-----cCCCCCCCcCCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 55442 334433 45555 45 4443 569999999999999999999999998874
No 32
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=2e-49 Score=406.46 Aligned_cols=374 Identities=14% Similarity=0.136 Sum_probs=289.0
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcch------HHHHHHHHHHHHhCCCCeee--ccCCceEEEEEcCC--C
Q 013332 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------FETSKLIRAELDQMGIPYKF--PVAVTGVVGYIGTG--Q 104 (445)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E------~~~a~~l~~~l~~~G~~~~~--~~~~~nvia~~~~~--~ 104 (445)
+..++.++++.++ ++++++|++|++|||+|+++ .++++||+++|+++||++++ ..+++|+++++++. .
T Consensus 4 ~~~~~~~~~~~~~--~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~ 81 (464)
T PRK09104 4 DLDPVLDHIDANL--DASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGD 81 (464)
T ss_pred cHHHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCC
Confidence 3567899999988 99999999999999999754 68999999999999999876 33567999999642 3
Q ss_pred CcEEEEEEecccccCCCCCCCccc----cCCCC-----ccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeec
Q 013332 105 PPFVALRADMDALAMEESVEWEHK----SKVPG-----KMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPA 172 (445)
Q Consensus 105 ~p~i~l~~H~DtVp~~~~~~w~~~----~~~~g-----~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~d 172 (445)
+|+|+|+||+||||+++...|.++ .++|| +|||||+ ||+++++|.|++.|++.+..++++|.|+|++|
T Consensus 82 ~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~d 161 (464)
T PRK09104 82 APHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGE 161 (464)
T ss_pred CCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECc
Confidence 599999999999999887789654 24443 5999998 89999999999999987767889999999999
Q ss_pred CC-CCccHHHHHHccC-CCCcceeEEecccCCCCC-CceeeccCcccccceEEEEEEEe--cCCCCCC-CCCCCCHHHHH
Q 013332 173 EE-GGGGAKKMLDAGA-LENVEAIFGLHVSSLFPV-GTVASRPGPTLAAGGFFEAVING--KGGHAAI-PQHTIDPIVAA 246 (445)
Q Consensus 173 EE-g~~G~~~l~~~~~-~~~~d~~i~~~~~~~~p~-g~~~~~~g~~~~G~~~~~i~~~G--~~~Has~-p~~g~NAi~~~ 246 (445)
|| |+.|.+.++.+.. ....|++|+.++....+. ..+ ..++||..+++|+++| +++|||. |+.|.|||..+
T Consensus 162 EE~g~~g~~~~l~~~~~~~~~d~~iv~E~~~~~~~~~~i----~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~ 237 (464)
T PRK09104 162 EESGSPSLVPFLEANAEELKADVALVCDTGMWDRETPAI----TTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVL 237 (464)
T ss_pred cccCCccHHHHHHhhHHhcCCCEEEEeCCCCCCCCCeEE----EeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHH
Confidence 99 6788888876532 124688887543211011 122 3468999999999999 6899995 68899999999
Q ss_pred HHHHHHHHHhhccc------------------------------------CCC------------CCCeeEEEEEEEcCC
Q 013332 247 SNVIVSLQHLVSRE------------------------------------ADP------------LDSQVLTVAKFEGGG 278 (445)
Q Consensus 247 ~~~i~~l~~~~~~~------------------------------------~~~------------~~~~t~~i~~i~gG~ 278 (445)
++++.+|++...+. ..+ ...+|+|++.|+||.
T Consensus 238 ~~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~ 317 (464)
T PRK09104 238 TRILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGY 317 (464)
T ss_pred HHHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCC
Confidence 99999987531100 000 124689999999985
Q ss_pred ----ccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHH
Q 013332 279 ----AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVA 352 (445)
Q Consensus 279 ----~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~ 352 (445)
..|+||++|++++|+|++|+++.+++.+.|++ +++... ..+.++++.. ....|++ +.++++++.+.+++
T Consensus 318 ~~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~--~l~~~~-~~~~~v~~~~--~~~~~~~~~~~~~~~v~~l~~~~ 392 (464)
T PRK09104 318 TGEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRA--YVRARL-PADCSVEFHD--HGGSPAIALPYDSPALAAAKAAL 392 (464)
T ss_pred CCCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHH--HHHHhC-CCCeEEEEEe--cCCCCceECCCCCHHHHHHHHHH
Confidence 46999999999999999999999999999999 886421 1233444432 2234443 56788999999999
Q ss_pred HHhcCCcccccCCCCCccc-hHHHHHhh--cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 353 ADMLGVQNIKENRPLMGTE-DFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 353 ~~~~g~~~~~~~~~~~g~t-D~~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
++.+|.++.. ...+|++ |++.|.+. +|++++++|.. ...+|++||||+++++.+++++|.+++..++
T Consensus 393 ~~~~~~~~~~--~~~~g~~~~~~~~~~~~gip~v~~g~G~~------~~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 393 SDEWGKPAVL--IGSGGSIPIVGDFKRILGMDSLLVGFGLD------DDRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred HHHhCCCcee--cCCCCcHHHHHHHHHHhCCCEEEecCCCC------CCCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 9988876542 2344443 45666553 89887665532 2469999999999999999999999998875
No 33
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=3.8e-49 Score=389.98 Aligned_cols=332 Identities=16% Similarity=0.156 Sum_probs=267.2
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCcccc
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKS 129 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~~~ 129 (445)
+++++++++|++|||++++|.++++|+.++|+++||+++.+. .+|++++++++ +|+|+|+||+||||... |+ .
T Consensus 6 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~i~~~~~~-~~~l~~~~H~DtVp~~~----p~-~ 78 (348)
T PRK04443 6 LEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVDE-AGNARGPAGDG-PPLVLLLGHIDTVPGDI----PV-R 78 (348)
T ss_pred HHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEcCCC-CCEEEEEeeccccCCCC----Cc-E
Confidence 679999999999999999999999999999999999988643 57999998543 49999999999999532 34 3
Q ss_pred CCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCC
Q 013332 130 KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPV 205 (445)
Q Consensus 130 ~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~ 205 (445)
++||++||||+ ||++++++.|+++| +.+++++|.|++++||| ++.|...++.++. .+|++|+. +|+
T Consensus 79 ~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~-----Ept 148 (348)
T PRK04443 79 VEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIG-----EPS 148 (348)
T ss_pred eeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEe-----CCC
Confidence 57899999997 89999999999998 34788999999999999 5566666666653 56888864 455
Q ss_pred CceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhc---ccCCCCCCeeEEEEEEEcCCcccc
Q 013332 206 GTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVS---READPLDSQVLTVAKFEGGGAFNI 282 (445)
Q Consensus 206 g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~---~~~~~~~~~t~~i~~i~gG~~~Nv 282 (445)
+... ...+++|..+++|+++|+++|||.| |.|||..+++++..|+++.. .....+...++|++.|+ ...|+
T Consensus 149 ~~~~--i~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n~ 222 (348)
T PRK04443 149 GWDG--ITLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSDG 222 (348)
T ss_pred Cccc--eeeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCCC
Confidence 4211 1346789999999999999999987 79999999999999988643 11123456788999988 45799
Q ss_pred ccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCCcc
Q 013332 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQN 360 (445)
Q Consensus 283 iP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~ 360 (445)
||++|++.+|+|++|+++.+++.++|++ ++. +.++ ++ ...+|++ +.++++++.+++++++.++. +
T Consensus 223 iP~~~~~~~d~R~~p~~~~~~i~~~i~~--~~~------~~~~--~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~ 289 (348)
T PRK04443 223 LTVEAEMTVGLRLPPGLSPEEAREILDA--LLP------TGTV--TF--TGAVPAYMVSKRTPLARAFRVAIREAGGT-P 289 (348)
T ss_pred CCceEEEEEEEccCCCCCHHHHHHHHHH--hCC------CcEE--EE--ecCCCceecCCCCHHHHHHHHHHHHhcCC-c
Confidence 9999999999999999999999999999 762 2333 33 2234444 45678999999999998553 3
Q ss_pred cccCCCCCccchHHHHHhh--cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 361 IKENRPLMGTEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 361 ~~~~~~~~g~tD~~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
. ....+|++|+++|.+. +|++. +| ||+...+|++|||+++++|.+++++|.+++.++
T Consensus 290 ~--~~~~~g~tD~~~~~~~~gip~v~--~G-----pg~~~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 290 R--LKRKTGTSDMNVVAPAWGCPMVA--YG-----PGDSDLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred c--eeccccCCcHHHHhhhcCCCEEE--EC-----CCCccccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 2 2356799999999863 88875 56 555567899999999999999999999998653
No 34
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=5.6e-49 Score=391.72 Aligned_cols=331 Identities=19% Similarity=0.182 Sum_probs=254.7
Q ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHhCCCC-eeeccCCceEEEEEcCCCCcEEEEEEecccccCCCC--CCCcc----
Q 013332 55 IRRKIHENPELGFQEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEES--VEWEH---- 127 (445)
Q Consensus 55 ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~--~~w~~---- 127 (445)
++++|++|||+|++|.++++||.++|+++|++ ++....+.||+++++++++|+|+|+|||||||+++. ..|.+
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~ 80 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDS 80 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCccc
Confidence 47899999999999999999999999999653 222222459999986544689999999999998752 45753
Q ss_pred --------ccCCCCccccCcc---hHHHHHHHHHHHHHHh--ccccCCceEEEEEeecCCC-C--ccHHHHHHccC-CCC
Q 013332 128 --------KSKVPGKMHACGH---DAHVAMLLGAAKMLQV--FRHEIKGTIVLVFQPAEEG-G--GGAKKMLDAGA-LEN 190 (445)
Q Consensus 128 --------~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~--~~~~l~~~i~~i~~~dEEg-~--~G~~~l~~~~~-~~~ 190 (445)
..++||+|||||+ ||+++++|+|++.|++ .+..++++|.|+|++|||. + .|++++++... +..
T Consensus 81 ~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~ 160 (373)
T TIGR01900 81 LIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLA 160 (373)
T ss_pred ccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccccc
Confidence 2467899999998 8999999999999954 3456889999999999994 2 59999988642 224
Q ss_pred cceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC--CC-CCCe
Q 013332 191 VEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA--DP-LDSQ 267 (445)
Q Consensus 191 ~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~--~~-~~~~ 267 (445)
.|++|+. +|++. ....+++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+++..... +. ....
T Consensus 161 ~d~~iv~-----Ept~~---~i~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~ 232 (373)
T TIGR01900 161 ADFAIIG-----EPTGG---GIEAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYRE 232 (373)
T ss_pred CCEEEEE-----CCCCC---cccccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccc
Confidence 6877763 34442 123468899999999999999999999999999999999999988643211 11 2246
Q ss_pred eEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHH--------HHHh---hC-CeEEEEecccCCC
Q 013332 268 VLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMK--------QASV---QR-CNATVTFDDKSFY 335 (445)
Q Consensus 268 t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~--------~~~~---~~-~~~~i~~~~~~~~ 335 (445)
++|++.|+||.+.|+||++|++++|+|+.|+++.+++.+.|++ +++. .... .+ ..++++. ....
T Consensus 233 t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 308 (373)
T TIGR01900 233 GLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMG--ADAGAELGNGEHVAEGGEFDGQDGIEIAM--EDEA 308 (373)
T ss_pred eEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHh--hhhhhhhhHHHHHHhhccccccccceEEE--cccC
Confidence 8999999999999999999999999999999999999999976 5422 2211 11 1233433 1122
Q ss_pred Ccc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCC
Q 013332 336 PVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVN 408 (445)
Q Consensus 336 ~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~ 408 (445)
++. ..+.++++.+.+++++.+|.++. ...|+||+++|... +|++. || ||+..++|++||||.
T Consensus 309 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~--~G-----pg~~~~aH~~dE~v~ 373 (373)
T TIGR01900 309 GGALPGLGAPLAQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALN--FG-----AGDPLFAHKHDEQCP 373 (373)
T ss_pred CCCCCCCCCHHHHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEE--eC-----CCChhhccCCCCCCC
Confidence 222 34678899999999998777652 36788999999876 89886 46 666678999999984
No 35
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=9.5e-49 Score=388.15 Aligned_cols=333 Identities=17% Similarity=0.151 Sum_probs=258.6
Q ss_pred HHHHHHHHHHHhCCCCC----cchHHHHHHHHHHHHhCCCCeeec---cCCceEEEEEcCCCCcEEEEEEecccccCCCC
Q 013332 50 YWMVNIRRKIHENPELG----FQEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTGQPPFVALRADMDALAMEES 122 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s----~~E~~~a~~l~~~l~~~G~~~~~~---~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~ 122 (445)
+++++++++|++|||.+ ++|.++++||.++|+ |+++++. .++.|+++..+ +|+|+|+||+||||+++
T Consensus 6 ~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~~~- 79 (364)
T PRK08737 6 ESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPDSP- 79 (364)
T ss_pred HHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCCCC-
Confidence 67899999999999985 357899999999997 9988764 24569998643 37899999999999865
Q ss_pred CCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC-ccHHHHHHccCCCCcce
Q 013332 123 VEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGALENVEA 193 (445)
Q Consensus 123 ~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~l~~~~~~~~~d~ 193 (445)
.|.++ .++||+|||||+ ||++++++.|++. +.++|.|+|++||| ++ .|++.+++.+. +.|+
T Consensus 80 -~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~~ 149 (364)
T PRK08737 80 -HWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYEA 149 (364)
T ss_pred -CCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCCE
Confidence 68543 467899999998 8999999998863 35789999999999 55 68899998764 4677
Q ss_pred eEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCC-CCCCCHHHHHHHHHHHHHHhhccc----CCCCCCee
Q 013332 194 IFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIP-QHTIDPIVAASNVIVSLQHLVSRE----ADPLDSQV 268 (445)
Q Consensus 194 ~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p-~~g~NAi~~~~~~i~~l~~~~~~~----~~~~~~~t 268 (445)
+|+ ++|++... ..+++|..+++|+++|+++|+|.| +.|+|||..+++++.++.+..... .......+
T Consensus 150 ~iv-----~Ept~~~~---~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t 221 (364)
T PRK08737 150 VLV-----AEPTMSEA---VLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGLR 221 (364)
T ss_pred EEE-----cCCCCcee---EEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCc
Confidence 776 45665322 246899999999999999999988 689999999999998876543211 12234569
Q ss_pred EEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCC-HHHHHH
Q 013332 269 LTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNN-KNLHEH 347 (445)
Q Consensus 269 ~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d-~~l~~~ 347 (445)
+|++.|+||.+.|+||++|++++|+|+.|+++.+++.++|++ +++.. ..+++.... ...+++...+ .+++..
T Consensus 222 ~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~--~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~ 294 (364)
T PRK08737 222 FNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAG--FAEPA----AATFEETFR-GPSLPSGDIARAEERRL 294 (364)
T ss_pred eEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHH--HHHHc----CCceEEEec-cCCCCCcccCcchHHHH
Confidence 999999999999999999999999999999999999999988 76531 233333321 2344444322 345554
Q ss_pred H-HHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013332 348 F-QKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 424 (445)
Q Consensus 348 ~-~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~ 424 (445)
+ +++.++. |.+. ....+++||+++|... +|++.+ | ||+...+|++||||++++|.+++++|.+++.
T Consensus 295 ~~~~~~~~~-~~~~---~~~~~~~tDa~~~~~~Gip~v~~--G-----pG~~~~aHt~dE~i~i~~l~~~~~~~~~~~~ 362 (364)
T PRK08737 295 AARDVADAL-DLPI---GNAVDFWTEASLFSAAGYTALVY--G-----PGDIAQAHTADEFVTLDQLQRYAESVHRIIN 362 (364)
T ss_pred HHHHHHhhh-cCCC---CceeccccCHHHHHHcCCCEEEE--C-----CCChhhccCCCcceeHHHHHHHHHHHHHHhc
Confidence 4 4444443 6543 2245678999999877 999875 5 6666789999999999999999999998865
No 36
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.3e-48 Score=387.23 Aligned_cols=334 Identities=19% Similarity=0.192 Sum_probs=265.8
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCCeeeccCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCcc
Q 013332 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (445)
Q Consensus 49 ~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~-G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~ 127 (445)
.+++++++++|++|||+|++|.++++||.++|+++ |+++... ..|++++++++++++|+|+||+||||+++ .+++
T Consensus 6 ~~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~~ 81 (352)
T PRK13007 6 AADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIRH--GNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLPS 81 (352)
T ss_pred HHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEec--CCeEEEEccCCCCCeEEEEccccccCCCC--CCCc
Confidence 37799999999999999999999999999999996 8887643 47999999655557899999999999875 3444
Q ss_pred ccCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC--ccHHHHHHccC-CCCcceeEEeccc
Q 013332 128 KSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--GGAKKMLDAGA-LENVEAIFGLHVS 200 (445)
Q Consensus 128 ~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~--~G~~~l~~~~~-~~~~d~~i~~~~~ 200 (445)
. ++||+|||||+ |+++|++|.|++.|. .++++|.|+|++||| ++ .|++.+++... +.++|++++.+
T Consensus 82 ~-~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~e-- 154 (352)
T PRK13007 82 R-REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLE-- 154 (352)
T ss_pred c-eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEec--
Confidence 3 67899999998 799999999999983 477899999999999 44 58898887532 33568888754
Q ss_pred CCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC---CCCCeeEEEEEEEcC
Q 013332 201 SLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD---PLDSQVLTVAKFEGG 277 (445)
Q Consensus 201 ~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~---~~~~~t~~i~~i~gG 277 (445)
|++.. ...+++|..+++|+++|+++|||.|+.|.||+..+++++.+|+++..+... .....+++++.|+||
T Consensus 155 ---p~~~~---i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~gG 228 (352)
T PRK13007 155 ---PTDGV---IEAGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISGG 228 (352)
T ss_pred ---CCCCc---eEeeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEecC
Confidence 33321 123578999999999999999999999999999999999999886532211 112358999999999
Q ss_pred CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcC
Q 013332 278 GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLG 357 (445)
Q Consensus 278 ~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g 357 (445)
...|+||++|++++|+|++|+++.+++.++|++ .++.. . ++++... ..+++ ...++++++.+.+++ |
T Consensus 229 ~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~--~~~~~----~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~----g 295 (352)
T PRK13007 229 VAGNVIPDECVVNVNYRFAPDRSLEEALAHVRE--VFDGF----A-EVEVTDL-APGAR-PGLDHPAAAALVAAV----G 295 (352)
T ss_pred CcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHH--Hhccc----c-EEEeecc-cCCCC-CCCCCHHHHHHHHHh----C
Confidence 999999999999999999999999999999999 77542 1 3333220 12222 234677888877763 5
Q ss_pred CcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013332 358 VQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 423 (445)
Q Consensus 358 ~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i 423 (445)
..+ ....|++|++++... +|++. +| ||....+|++|||++++++.+++++|++++
T Consensus 296 ~~~----~~~~g~td~~~~~~~Gip~v~--~G-----pg~~~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 296 GEV----RAKYGWTDVARFSALGIPAVN--FG-----PGDPALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred CCC----ccccccchHHHHHhCCCCEEE--eC-----CCchhhccCCCCceEHHHHHHHHHHHHHHh
Confidence 443 235788999999887 99876 46 555568999999999999999999999875
No 37
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=7.2e-49 Score=398.49 Aligned_cols=355 Identities=15% Similarity=0.159 Sum_probs=267.8
Q ss_pred HHHHHHHHhCCCCC------cchHHHHHHHHHHHHhCCCCeeec---cCCceEEEEEcCC-C-CcEEEEEEecccccCCC
Q 013332 53 VNIRRKIHENPELG------FQEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTG-Q-PPFVALRADMDALAMEE 121 (445)
Q Consensus 53 ~~ll~~l~~ips~s------~~E~~~a~~l~~~l~~~G~~~~~~---~~~~nvia~~~~~-~-~p~i~l~~H~DtVp~~~ 121 (445)
++++++|++|||++ .+|.++++||.++|+++||+++.. ++++|+++++++. + .|+|+|+||+||||+++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 68899999999999 689999999999999999998864 2568999999543 3 48999999999999865
Q ss_pred CCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC-ccHHHHHHcc--CCCC
Q 013332 122 SVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAG--ALEN 190 (445)
Q Consensus 122 ~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~l~~~~--~~~~ 190 (445)
.+|.++ .++||+|||||+ |++++++|+|+++|++.+..++++|.|+|++||| ++ .|+++++++. .+..
T Consensus 82 -~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~ 160 (426)
T PRK07906 82 -ADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEG 160 (426)
T ss_pred -ccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccc
Confidence 479654 467999999998 8999999999999999888889999999999999 44 5999998753 2223
Q ss_pred cceeEEecccC--CCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc--------
Q 013332 191 VEAIFGLHVSS--LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-------- 260 (445)
Q Consensus 191 ~d~~i~~~~~~--~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~-------- 260 (445)
.++++...... ..+.+........+++|..+++|+++|+++|+|.|+. .|||..++++|.+|++...+.
T Consensus 161 ~~~ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 239 (426)
T PRK07906 161 VTEAISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVRA 239 (426)
T ss_pred hheEEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHHH
Confidence 34444321100 0111100112345689999999999999999999864 999999999999997542110
Q ss_pred ------------CCCC-------------------CCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHH
Q 013332 261 ------------ADPL-------------------DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIE 309 (445)
Q Consensus 261 ------------~~~~-------------------~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~ 309 (445)
.++. ..+|+|++.|+||.+.|+||++|++++|+|++|+++ +++.+.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i~ 318 (426)
T PRK07906 240 FLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATVD 318 (426)
T ss_pred HHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHHH
Confidence 0000 146999999999999999999999999999999886 66666666
Q ss_pred hHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEE
Q 013332 310 EWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYY 386 (445)
Q Consensus 310 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~ 386 (445)
+ ++. ..+++++ ...++++ +.|+++++.+++++++.++.... .+....|+||++++... +|++.
T Consensus 319 ~--~~~-------~~v~~~~--~~~~~~~~~~~~~~~v~~l~~a~~~~~~~~~~-~~~~~~ggtDa~~~~~~g~p~~~-- 384 (426)
T PRK07906 319 E--LLG-------PDVEREW--VHRDPALETPFDGPLVDAMNAALLAEDPGARV-VPYMLSGGTDAKAFSRLGIRCYG-- 384 (426)
T ss_pred H--HhC-------CCeEEEE--ecCCCCCCCCCCcHHHHHHHHHHHHHCCCCeE-eeeeecccCcHHHHHhcCCceEE--
Confidence 6 542 2344544 2234443 45788999999999987532111 22356788999999977 88765
Q ss_pred ecCCCCCCCC---CCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013332 387 LGMNDETKGK---FETGHSPYFRVNEDALPYGAALHASLATR 425 (445)
Q Consensus 387 ~G~~~~~pG~---~~~~H~~~E~v~i~~l~~~~~~~~~~i~~ 425 (445)
|||... |+. ...+|++||++++++|.+++++|++++.+
T Consensus 385 ~gp~~~-~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 385 FAPLRL-PPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred Eecccc-CccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 453210 111 25799999999999999999999999865
No 38
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=1.1e-48 Score=388.98 Aligned_cols=340 Identities=19% Similarity=0.193 Sum_probs=278.5
Q ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc------CCceEEEEEcCC-CCcEEEEEEecccccCCCCCC
Q 013332 52 MVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYIGTG-QPPFVALRADMDALAMEESVE 124 (445)
Q Consensus 52 ~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~------~~~nvia~~~~~-~~p~i~l~~H~DtVp~~~~~~ 124 (445)
+++++++|++|||+|++|.++++||+++|+++||+++... +++|++++++++ ++|+|+|+||+||||+++ .
T Consensus 2 ~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~--~ 79 (361)
T TIGR01883 2 LKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA--G 79 (361)
T ss_pred hHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC--C
Confidence 6789999999999999999999999999999999987642 378999999654 348999999999999864 3
Q ss_pred CccccCCCCccccCcc-------hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEE
Q 013332 125 WEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFG 196 (445)
Q Consensus 125 w~~~~~~~g~l~GrG~-------kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~ 196 (445)
|. ..+++|++||||+ |++++++|.+++.|++.+ .++++|.|+|++||| ++.|++.+.+.+. ..++.+.
T Consensus 80 ~~-~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~ 155 (361)
T TIGR01883 80 PE-PVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYC 155 (361)
T ss_pred CC-ceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEE
Confidence 43 2467899999994 599999999999998865 578899999999999 5579998876432 2455555
Q ss_pred ecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEE
Q 013332 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE 275 (445)
Q Consensus 197 ~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~ 275 (445)
.++ ..+.+.+.. +++|..+++++++|+++|+| .|+.|+||+..+++++.+|+... . ....+++++.++
T Consensus 156 ~~~--~~~~~~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~---~--~~~~~~~i~~i~ 224 (361)
T TIGR01883 156 LDA--PGEVGNIQL----AAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR---I--DEETTANIGSFS 224 (361)
T ss_pred EeC--CCCcceEEe----cCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC---C--CCccccccceee
Confidence 432 223344432 45799999999999999986 79999999999999999986531 1 123678999999
Q ss_pred cCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHH
Q 013332 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAA 353 (445)
Q Consensus 276 gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~ 353 (445)
||...|+||++|++.+|+|..+..+.+.+.++|++ .++..+..+++++++.+ ...++++ ..|+++++.++++++
T Consensus 225 gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~--~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lv~~l~~a~~ 300 (361)
T TIGR01883 225 GGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRE--RFEQAAEKYGATLEEET--RLIYEGFKIHPQHPLMNIFKKAAK 300 (361)
T ss_pred cCCccCccCCceEEEEEEecCCHHHHHHHHHHHHH--HHHHHHHHcCCEEEEEE--EeccccccCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99887777777777765 3445555 456789999999998
Q ss_pred HhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013332 354 DMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 423 (445)
Q Consensus 354 ~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i 423 (445)
+. |.++. ...++|++|++++... +|++++ | ||. ..+|++||+++++++..++++|.+++
T Consensus 301 ~~-g~~~~--~~~~~g~tD~~~~~~~giP~v~~--G-----~g~-~~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 301 KI-GLKTS--EIFSGGGSDANVLNEKGVPTVNL--S-----AGY-VHAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred Hc-CCCcE--EEecCcccHHHHHhhCCCceEEE--C-----CCc-ccCcCcceeEEHHHHHHHHHHHHHHh
Confidence 85 87653 2467899999999976 999875 4 444 46999999999999999999999875
No 39
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=3.3e-48 Score=396.19 Aligned_cols=359 Identities=14% Similarity=0.046 Sum_probs=272.8
Q ss_pred HHHhhcCchhHHHHHHHHHHHHhCCCCCc------------chHHHHHHHHHHHHhCCCCeeeccCCceEEEEEc-CCCC
Q 013332 39 FLDFAKKPEIFYWMVNIRRKIHENPELGF------------QEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIG-TGQP 105 (445)
Q Consensus 39 ~~~~~~~~~~~~~~~~ll~~l~~ips~s~------------~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~-~~~~ 105 (445)
+.+++++++ ++++++|++|++|||++. ++.++++++.++|+++||+++..+ |+++.+. ++++
T Consensus 4 ~~~~i~~~~--~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~ 78 (466)
T TIGR01886 4 FKEEVEARK--DALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGD 78 (466)
T ss_pred HHHHHHHhH--HHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCC
Confidence 567778877 899999999999999974 356789999999999999988533 3444432 2235
Q ss_pred cEEEEEEecccccCCCCCCCcc---c-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCc
Q 013332 106 PFVALRADMDALAMEESVEWEH---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (445)
Q Consensus 106 p~i~l~~H~DtVp~~~~~~w~~---~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~ 177 (445)
|+|+|+||+||||+++ .|.+ . .++||+|||||+ ||+++++|.|+++|++.+..++++|.|++++||| ++.
T Consensus 79 ~~l~~~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~ 156 (466)
T TIGR01886 79 ERLGIIGHMDVVPAGE--GWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWV 156 (466)
T ss_pred CEEEEEeecccCCCCC--CCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcc
Confidence 8999999999999974 5864 3 477999999998 8999999999999999888899999999999999 668
Q ss_pred cHHHHHHccCCCCcceeEEecccC----CCCCCce---------------------------------eec---------
Q 013332 178 GAKKMLDAGALENVEAIFGLHVSS----LFPVGTV---------------------------------ASR--------- 211 (445)
Q Consensus 178 G~~~l~~~~~~~~~d~~i~~~~~~----~~p~g~~---------------------------------~~~--------- 211 (445)
|++++++++. .+|+++..+.+. +++.... .+.
T Consensus 157 g~~~~~~~~~--~~d~~~~~d~~~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~ 234 (466)
T TIGR01886 157 DMDYYFKHEE--TPDFGFSPDAEFPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKA 234 (466)
T ss_pred cHHHHHhcCc--CCCEEEECCCCceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHH
Confidence 9999998764 245544321100 1111100 000
Q ss_pred ---cCcccccce---------EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHH----------HHhhc-----------
Q 013332 212 ---PGPTLAAGG---------FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSL----------QHLVS----------- 258 (445)
Q Consensus 212 ---~g~~~~G~~---------~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l----------~~~~~----------- 258 (445)
....++|.. |++|+++|+++|||.|+.|+|||..|++++..+ +.+..
T Consensus 235 ~~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 314 (466)
T TIGR01886 235 AYESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKL 314 (466)
T ss_pred HHHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccC
Confidence 001245544 799999999999999999999999999988872 22210
Q ss_pred ---ccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCC
Q 013332 259 ---READPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFY 335 (445)
Q Consensus 259 ---~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 335 (445)
.....++..|+|++.|+||.. | ++|++.+|+|++|+++.+++.++|++ +++. ..++++.. ....
T Consensus 315 ~~~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~--~i~~-----~~~v~~~~--~~~~ 381 (466)
T TIGR01886 315 GIAFHDELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLD--KFGG-----IVDVTYNG--HFEE 381 (466)
T ss_pred CCcccccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHH--HHhc-----ccEEEEec--ccCC
Confidence 011235678999999999965 4 89999999999999999999999999 7753 12333211 1122
Q ss_pred Cc-ccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 336 PV-TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 336 ~~-~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
|. .+.++++++.+.+++++.+|.++. ....+|+||+++|...+|... +| ||+..++|++||||++++|.+
T Consensus 382 P~~~~~ds~lv~~l~~a~~~v~G~~~~--~~~~~ggTDa~~~~~~i~~gv--~g-----PG~~~~aH~~dE~V~i~el~~ 452 (466)
T TIGR01886 382 PHYVPGSDPLVQTLLKVYEKHTGKKGH--EVIIGGGTYGRLLERGVAYGA--MF-----EGGPDVMHQANEFMMLDDLIL 452 (466)
T ss_pred CcccCCCCHHHHHHHHHHHHHhCCCCc--eeeecCccHHHhccccccccc--cc-----CCCCCCccCCCcceEHHHHHH
Confidence 22 244678999999999998887653 346899999999986566443 34 777788999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013332 415 GAALHASLATRYLL 428 (445)
Q Consensus 415 ~~~~~~~~i~~l~~ 428 (445)
++++|++++.+++.
T Consensus 453 a~~iy~~~i~~l~~ 466 (466)
T TIGR01886 453 AAAIYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999863
No 40
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-47 Score=392.80 Aligned_cols=371 Identities=13% Similarity=0.060 Sum_probs=278.4
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcc---hHHHHHHHH----HHHHhCCCCeeec-----cCCceEEEEEcCC-
Q 013332 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ---EFETSKLIR----AELDQMGIPYKFP-----VAVTGVVGYIGTG- 103 (445)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~---E~~~a~~l~----~~l~~~G~~~~~~-----~~~~nvia~~~~~- 103 (445)
+++.++++. +++++++++|++|||+|++ +.++++|++ ++|+++||++++. .+++||++.++++
T Consensus 8 ~~~~~~~~~----~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~ 83 (469)
T PRK07079 8 ARAAAYFDS----GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDD 83 (469)
T ss_pred HHHHHhhcc----HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCC
Confidence 455666654 5699999999999999974 456777764 5899999998862 2467999998653
Q ss_pred CCcEEEEEEecccccCCCCCCCc-----cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhc-cccCCceEEEEEeecC
Q 013332 104 QPPFVALRADMDALAMEESVEWE-----HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVF-RHEIKGTIVLVFQPAE 173 (445)
Q Consensus 104 ~~p~i~l~~H~DtVp~~~~~~w~-----~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~-~~~l~~~i~~i~~~dE 173 (445)
++|+|+|+||+||||+++ ..|. |. .++||+|||||+ ||+++++|+|+++|++. +.+++++|.|++++||
T Consensus 84 ~~~~lll~gH~DvVp~~~-~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dE 162 (469)
T PRK07079 84 ALPTVLIYGHGDVVRGYD-EQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGE 162 (469)
T ss_pred CCCEEEEEcccCCCCCCh-HHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECcc
Confidence 458999999999999764 4676 33 578999999998 89999999999998754 4678899999999999
Q ss_pred C-CCccHHHHHHccC-CCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEec--CCCCCCC-CCCCCHHHHHHH
Q 013332 174 E-GGGGAKKMLDAGA-LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGK--GGHAAIP-QHTIDPIVAASN 248 (445)
Q Consensus 174 E-g~~G~~~l~~~~~-~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~--~~Has~p-~~g~NAi~~~~~ 248 (445)
| ++.|+++++++.. ....|++|+.++....+.. .. ...++||..+++|+++|+ +.||+.+ ..+.||+..+++
T Consensus 163 E~g~~G~~~l~~~~~~~~~~d~~iv~e~~~~~~~~-~~--i~~g~kG~~~~~v~v~G~~~~~hs~~~~g~~~nai~~l~~ 239 (469)
T PRK07079 163 EIGSPGLAEVCRQHREALAADVLIASDGPRLSAER-PT--LFLGSRGAVNFRLRVNLRDGAHHSGNWGGLLRNPGTVLAH 239 (469)
T ss_pred ccCCccHHHHHHHhHHhcCCCEEEEeCCCccCCCC-eE--EEEecceEEEEEEEEeeCCCCCCCCccccccCCHHHHHHH
Confidence 9 7789999998642 1236888875432111111 11 124689999999999998 4566632 234799999999
Q ss_pred HHHHHHHhhccc------------------------C--------------------CCCCCeeEEEEEEEcCC---ccc
Q 013332 249 VIVSLQHLVSRE------------------------A--------------------DPLDSQVLTVAKFEGGG---AFN 281 (445)
Q Consensus 249 ~i~~l~~~~~~~------------------------~--------------------~~~~~~t~~i~~i~gG~---~~N 281 (445)
+|.++.+...+. . .....+|+|++.|+||. ..|
T Consensus 240 ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~N 319 (469)
T PRK07079 240 AIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPVN 319 (469)
T ss_pred HHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcce
Confidence 999985421000 0 00123589999999994 689
Q ss_pred cccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCCc
Q 013332 282 IIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQ 359 (445)
Q Consensus 282 viP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~ 359 (445)
+||++|++++|+|++|+++.+++.++|++ +++... ..++++++ ...++++ +.++++++.+.+++++.+|.+
T Consensus 320 vVP~~a~~~vdiR~~P~~~~e~v~~~l~~--~i~~~~---~~~v~~~~--~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~ 392 (469)
T PRK07079 320 AIPGSARAVCQLRFVVGTDWENLAPHLRA--HLDAHG---FPMVEVTV--ERGSPATRLDPDDPWVRWALASIARTTGKK 392 (469)
T ss_pred EecCceEEEEEEEcCCCCCHHHHHHHHHH--HHHhcC---CCCeEEEE--eCCCCceecCCCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999 886531 11345554 3344443 457889999999999988876
Q ss_pred ccccCCCCCccchHHHHHh-h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 360 NIKENRPLMGTEDFSFFAE-A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 360 ~~~~~~~~~g~tD~~~~~~-~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
+... ...+|++|+++|.. . +|++++ |+.. || ..+|++||||+++++..++++|.+++.++++.
T Consensus 393 ~~~~-~~~~g~~d~~~~~~~~giP~v~~--g~~~--~~--~~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~ 457 (469)
T PRK07079 393 PALL-PNLGGSLPNDVFADILGLPTLWV--PHSY--PA--CSQHAPNEHLLASVAREGLQIMAGLFWDLGEQ 457 (469)
T ss_pred Ccee-cCCCcchhHHHHHHHhCCCEEEe--cCCC--CC--ccCcCCCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 5321 23566779888875 3 998754 4332 44 24799999999999999999999999999764
No 41
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=3.6e-47 Score=383.35 Aligned_cols=347 Identities=17% Similarity=0.162 Sum_probs=273.8
Q ss_pred HHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC-CC-cEEEEEEecccccC
Q 013332 52 MVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QP-PFVALRADMDALAM 119 (445)
Q Consensus 52 ~~~ll~~l~~ips~s~----------~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~-p~i~l~~H~DtVp~ 119 (445)
+++.+.++++|||+|+ ++.++++||.++|+++|++....++++||+|+++++ ++ |+|+|+||+||||+
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~ 82 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDV 82 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCc
Confidence 6888999999999997 478899999999999999655455788999999653 44 89999999999998
Q ss_pred CCCC--CC---ccc------------------------cCCCCccccCcc-------hHHHHHHHHHHHHHHhccccCCc
Q 013332 120 EESV--EW---EHK------------------------SKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKG 163 (445)
Q Consensus 120 ~~~~--~w---~~~------------------------~~~~g~l~GrG~-------kg~~aa~l~a~~~l~~~~~~l~~ 163 (445)
++.. .| +|+ ...||++||||+ ||+++++|.|+++|++.+ .+++
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g 161 (404)
T PRK13381 83 GLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHG 161 (404)
T ss_pred cCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCC
Confidence 7530 11 111 124678999995 899999999999998874 5688
Q ss_pred eEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-CCCCCCC
Q 013332 164 TIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTID 241 (445)
Q Consensus 164 ~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~~g~N 241 (445)
+|.|+|++||| ++.|+++++.++. ..|++++.+. ++|. .+. .+++|..+++|+++|+++|++ .|+.|.|
T Consensus 162 ~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~--~~~~-~i~----~~~~G~~~~~v~v~Gk~aHa~~~p~~g~N 232 (404)
T PRK13381 162 DIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDC--CELG-EVV----YENFNAASAEITITGVTAHPMSAKGVLVN 232 (404)
T ss_pred CEEEEEEcccccccccHHHHHHhcC--CCCEEEEecC--CCcc-eEE----EecCcceEEEEEEEeEecCCCCCcccCcC
Confidence 99999999999 5589999987653 3677777654 3453 332 246899999999999999988 5899999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhh
Q 013332 242 PIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQ 321 (445)
Q Consensus 242 Ai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~ 321 (445)
||..+++++.+|+++..+........+++++.++|+ |++|++++|+|+.|.++.+.+.++|++ ++++.+...
T Consensus 233 AI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~--~~~~~~~~~ 304 (404)
T PRK13381 233 PILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEE--VVAKINAKY 304 (404)
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHH--HHHHHHHHc
Confidence 999999999999876433222223346788877764 899999999999999999999999999 998887666
Q ss_pred C-CeEEEEecccCCCC--cccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCC
Q 013332 322 R-CNATVTFDDKSFYP--VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKF 397 (445)
Q Consensus 322 ~-~~~~i~~~~~~~~~--~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~ 397 (445)
+ +++++++......+ ....++++++.+++++++. |.++. ...++++||+++|... +|++++|. |.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~~Gp-------G~- 373 (404)
T PRK13381 305 PTARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKEL-GIEPK--VIPMRGGTDGAALSAKGLPTPNLFT-------GA- 373 (404)
T ss_pred CCcEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHc-CCCee--eccCCccchHHHHhcCCCCeEEECc-------cc-
Confidence 5 56666542111222 2456789999999999875 77653 3467899999999876 99988653 33
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 398 ETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 398 ~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
..+|++||||++++|.+++++|.+++.++.
T Consensus 374 ~~aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 374 HNFHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred cCCcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 349999999999999999999999988764
No 42
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-47 Score=382.34 Aligned_cols=362 Identities=22% Similarity=0.280 Sum_probs=281.7
Q ss_pred HHHHHHHHHHHhCCCCC-cchHHHHHHHHHHHHhCCCCeeecc-C----CceEEEEEcCCCC-cEEEEEEecccccCCCC
Q 013332 50 YWMVNIRRKIHENPELG-FQEFETSKLIRAELDQMGIPYKFPV-A----VTGVVGYIGTGQP-PFVALRADMDALAMEES 122 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s-~~E~~~a~~l~~~l~~~G~~~~~~~-~----~~nvia~~~~~~~-p~i~l~~H~DtVp~~~~ 122 (445)
+++++++++|+++||+| ..+.++++|++++|+++|+.+++.. + ..|++++++++++ |+|+|+||+||||+++.
T Consensus 13 ~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP~g~~ 92 (409)
T COG0624 13 DDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVPAGGG 92 (409)
T ss_pred HHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccCCCCc
Confidence 77889999999999999 8899999999999999999987632 2 4599999987644 99999999999999988
Q ss_pred CCCcc---c-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCC---CCc
Q 013332 123 VEWEH---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGAL---ENV 191 (445)
Q Consensus 123 ~~w~~---~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~---~~~ 191 (445)
.+|.+ . +++||+|||||+ ||++++++.|++.+.+.+..++++|.+++++||| ++.|+..++.++.. ..+
T Consensus 93 ~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 172 (409)
T COG0624 93 EDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGIRP 172 (409)
T ss_pred ccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhccCC
Confidence 88955 3 566799999998 8999999999999999877899999999999999 66788888776531 356
Q ss_pred ceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCC--CCCCCC----HHHHHHHHHHHHHHhhcccCCCCC
Q 013332 192 EAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI--PQHTID----PIVAASNVIVSLQHLVSREADPLD 265 (445)
Q Consensus 192 d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~--p~~g~N----Ai~~~~~~i~~l~~~~~~~~~~~~ 265 (445)
|+++..++....+.+..... +++|..+++|+++|+++|+|. |+.+.| |+..+.+++..+.++.... ..
T Consensus 173 d~~i~~E~~~~~~~~~~~~~---~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~---~~ 246 (409)
T COG0624 173 DYEIVGEPTLESEGGDIIVV---GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEG---FD 246 (409)
T ss_pred CEEEeCCCCCcccCCCeEEE---cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhccccccc---cc
Confidence 77776443100122333222 579999999999999999997 999999 5555555555544332111 12
Q ss_pred -CeeEEEEEEEcCCc--------cccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCC
Q 013332 266 -SQVLTVAKFEGGGA--------FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYP 336 (445)
Q Consensus 266 -~~t~~i~~i~gG~~--------~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 336 (445)
..+++++.+.+|.. .|+||++|++.+|+|+.|.++.+++.+++++ .++..+...++++++.........
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~--~i~~~~~~~~~~~~~~~~~~~~~~ 324 (409)
T COG0624 247 GPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEA--ELRAIAPKEGVEYEIEPGLGEPPL 324 (409)
T ss_pred CCccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHH--HHHHhccccCceEEeccccCCccc
Confidence 36677776665544 5999999999999999999999999999999 887665434555555420022233
Q ss_pred cccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013332 337 VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 415 (445)
Q Consensus 337 ~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~ 415 (445)
+.+.++++++.+.+++++.+|.++. ....++++|+.+++.. +|.+ .|| ||....+|++|||++++++.++
T Consensus 325 ~~~~~~~~v~~l~~~~~~~~g~~~~--~~~~G~~~da~~~~~~~~~~~--~fg-----p~~~~~~H~~~E~v~i~~l~~~ 395 (409)
T COG0624 325 PVPGDSPLVAALAEAAEELLGLPPE--VSTGGGTHDARFFARLGIPAV--IFG-----PGDIGLAHQPNEYVELEDLVKG 395 (409)
T ss_pred cCCCchHHHHHHHHHHHHhhCCCce--ecCCCCcchHHHHHhcCCeeE--EEC-----CCCcccccCCCceeeHHHHHHH
Confidence 3456788999999999997787632 3445577999999988 5743 467 6666789999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 013332 416 AALHASLATRYLL 428 (445)
Q Consensus 416 ~~~~~~~i~~l~~ 428 (445)
+++|++++.+++.
T Consensus 396 ~~~~~~~l~~l~~ 408 (409)
T COG0624 396 AKVLARLLYELAE 408 (409)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999874
No 43
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2e-46 Score=379.21 Aligned_cols=346 Identities=18% Similarity=0.190 Sum_probs=275.7
Q ss_pred HHHHHHHHHHHhCCC---------CCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcC-CCCcEEEEEEecccccC
Q 013332 50 YWMVNIRRKIHENPE---------LGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT-GQPPFVALRADMDALAM 119 (445)
Q Consensus 50 ~~~~~ll~~l~~ips---------~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~-~~~p~i~l~~H~DtVp~ 119 (445)
+++++++.+|++|+| .+++|.++++||.++|+++|+++++. .++|+++++++ +++|+|+|+||+||||+
T Consensus 10 ~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp~ 88 (412)
T PRK12892 10 QRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQNL 88 (412)
T ss_pred HHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCCC
Confidence 678899999999876 56778999999999999999999864 46799999965 34589999999999997
Q ss_pred CCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC-----C-ccHHHHHHccCC-----
Q 013332 120 EESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-----G-GGAKKMLDAGAL----- 188 (445)
Q Consensus 120 ~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-----~-~G~~~l~~~~~~----- 188 (445)
+ |++||+ ++++++|.|++.|++.+..++++|.|++++|||+ + .|++.++++...
T Consensus 89 ~------------g~~dg~---~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~ 153 (412)
T PRK12892 89 G------------GRYDGA---LGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALA 153 (412)
T ss_pred C------------Ccccch---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHh
Confidence 4 445676 4899999999999998888999999999999995 3 589988742100
Q ss_pred ------------------CCcceeEE-----------ecccC---CCCCCceeeccCcccccceEEEEEEEecCCCCC-C
Q 013332 189 ------------------ENVEAIFG-----------LHVSS---LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-I 235 (445)
Q Consensus 189 ------------------~~~d~~i~-----------~~~~~---~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~ 235 (445)
...|+++. .|.+. .++++.. .....+++|..+++|+++|+++|+| .
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~~-~~i~~~~kG~~~~~i~v~G~~aHa~~~ 232 (412)
T PRK12892 154 ARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGLP-VGVVTGIVGIWQYRITVTGEAGHAGTT 232 (412)
T ss_pred CccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCCc-EEEEEEeccceEEEEEEEEECCCCCCC
Confidence 00122222 11111 1122210 1123468999999999999999998 4
Q ss_pred CC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHH
Q 013332 236 PQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQV 313 (445)
Q Consensus 236 p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~ 313 (445)
|+ .|.|||..+++++.+|+++..+.. .+.+++++.|+|| .+.|+||++|++++|+|+.|+++.+++.++|++ +
T Consensus 233 p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~--~ 307 (412)
T PRK12892 233 PMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEA--L 307 (412)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHH--H
Confidence 65 688999999999999998643321 2379999999987 799999999999999999999999999999999 9
Q ss_pred HHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCC
Q 013332 314 VMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDET 393 (445)
Q Consensus 314 ~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~ 393 (445)
++..+..+++++++.. ...++++..|+++++.+++++++ +|.++. ....+|++|+++|++.+|++++ +|
T Consensus 308 ~~~~~~~~~~~~e~~~--~~~~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~-~g----- 376 (412)
T PRK12892 308 CREIARRRGCRVSVDR--IAEYAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAML-FV----- 376 (412)
T ss_pred HHHHHHHhCCeEEEEE--EecCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEE-Ee-----
Confidence 9887777788777765 45677777889999999999999 587653 3467899999999888997543 45
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 394 KGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 394 pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
||....+|++||++++++|.+++++|+.++.++++
T Consensus 377 p~~~~~~H~~~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 377 PSKGGISHNPAEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred ccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 44445699999999999999999999999988764
No 44
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=3e-47 Score=390.13 Aligned_cols=360 Identities=14% Similarity=0.130 Sum_probs=273.4
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhCCCCCcc------------hHHHHHHHHHHHHhCCCCeeeccCCceEEEEEc-CCC
Q 013332 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQ------------EFETSKLIRAELDQMGIPYKFPVAVTGVVGYIG-TGQ 104 (445)
Q Consensus 38 ~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~------------E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~-~~~ 104 (445)
++.+++++++ ++++++|++|++|||++++ +.++++||+++|+++||+++.. .|+++++. ++.
T Consensus 4 ~~~~~~~~~~--~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~---~n~~~~~~~~~~ 78 (466)
T PRK07318 4 DWKKEVEKRK--DDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNV---DNYAGHIEYGEG 78 (466)
T ss_pred hHHHHHHHhH--HHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEe---cCccceEEECCC
Confidence 4778888888 9999999999999999965 5689999999999999998854 36666653 223
Q ss_pred CcEEEEEEecccccCCCCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC
Q 013332 105 PPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG 176 (445)
Q Consensus 105 ~p~i~l~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~ 176 (445)
+|+|+|+||+||||+++ .|.++ .++||+|||||+ ||+++++++|++.|++.+..++++|.|+|++||| |+
T Consensus 79 ~~~l~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~ 156 (466)
T PRK07318 79 EEVLGILGHLDVVPAGD--GWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGW 156 (466)
T ss_pred CCEEEEEEecCCCCCCC--CCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCc
Confidence 48999999999999874 58543 467999999998 8999999999999999888888999999999999 66
Q ss_pred ccHHHHHHccCCCC----cce---eEEecc-----------------------cCCCCCCce------eec---------
Q 013332 177 GGAKKMLDAGALEN----VEA---IFGLHV-----------------------SSLFPVGTV------ASR--------- 211 (445)
Q Consensus 177 ~G~~~l~~~~~~~~----~d~---~i~~~~-----------------------~~~~p~g~~------~~~--------- 211 (445)
.|+++++++..... .|. ++..++ .++.+++.+ ...
T Consensus 157 ~G~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~ 236 (466)
T PRK07318 157 KCMDYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIA 236 (466)
T ss_pred hhHHHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHH
Confidence 89999998642110 111 111110 011111110 000
Q ss_pred ------cCcccccce-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHh------h----c------------
Q 013332 212 ------PGPTLAAGG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHL------V----S------------ 258 (445)
Q Consensus 212 ------~g~~~~G~~-----~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~------~----~------------ 258 (445)
...++||.. |++|+++|+++|+|.|+.|.|||..|+++|..|+.. . .
T Consensus 237 ~~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (466)
T PRK07318 237 AFEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLG 316 (466)
T ss_pred HHHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCC
Confidence 001356644 799999999999999999999999999999998641 0 0
Q ss_pred --ccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCC
Q 013332 259 --READPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYP 336 (445)
Q Consensus 259 --~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 336 (445)
......+..|+|++.|+||... .|++.+|+|++|+++.+++.++|++ +++. .+ ++++. ...+|
T Consensus 317 ~~~~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~--~~~~----~~--~~~~~--~~~~~ 381 (466)
T PRK07318 317 IAYEDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEK--LIGV----TG--VELSE--HEHQK 381 (466)
T ss_pred CcccCCCccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHH--HHHh----cC--eEEEE--ccCCC
Confidence 0111234679999999998542 7999999999999999999999999 7653 23 44443 33444
Q ss_pred c--ccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 337 V--TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 337 ~--~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
+ .+.++++++.+++++++.+|.++. ...++|+||++++...+ .+|+.. ||+..++|++|||++++++..
T Consensus 382 p~~~~~d~~lv~~l~~a~~~~~g~~~~--~~~~~ggtDa~~~~~~i-----~~Gp~~--pg~~~~aH~~dE~v~i~~l~~ 452 (466)
T PRK07318 382 PHYVPKDDPLVKTLLKVYEKQTGLKGE--EQVIGGGTYARLLKRGV-----AFGAMF--PGSEDTMHQANEYIEIDDLIK 452 (466)
T ss_pred ceeeCCCCHHHHHHHHHHHHHhCCCCC--eeEEcchHhHhhCCCeE-----EeCCCC--CCCCCCCcCCCcceeHHHHHH
Confidence 4 345788999999999987787653 34578899999986533 356555 676677999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013332 415 GAALHASLATRYLL 428 (445)
Q Consensus 415 ~~~~~~~~i~~l~~ 428 (445)
++++|.+++.++++
T Consensus 453 ~~~v~~~~l~~~~~ 466 (466)
T PRK07318 453 AAAIYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998863
No 45
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=2.4e-46 Score=377.84 Aligned_cols=351 Identities=15% Similarity=0.176 Sum_probs=274.8
Q ss_pred HHHHHHHHHHHhCCCCCcc----------hHHHHHHHHHHHHhCCCC-eeeccCCceEEEEEcCC---CCcEEEEEEecc
Q 013332 50 YWMVNIRRKIHENPELGFQ----------EFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG---QPPFVALRADMD 115 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~----------E~~~a~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~---~~p~i~l~~H~D 115 (445)
+.+++.|++|++|||+|.+ |.++++||+++|+++|++ ++++ ..+||++.++++ ++|+|+|+||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~-~~~~v~~~~~g~~~~~~~~i~l~~H~D 80 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTLD-ENGYVMATLPANVDKDVPTIGFIAHMD 80 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEEC-CCeEEEEEecCCCCCCCCeEEEEEecc
Confidence 5689999999999999976 889999999999999997 5543 467899999653 259999999999
Q ss_pred cccCCCC---------------------CCCcccc--------CCCCccccCc-----c--hHHHHHHHHHHHHHHhccc
Q 013332 116 ALAMEES---------------------VEWEHKS--------KVPGKMHACG-----H--DAHVAMLLGAAKMLQVFRH 159 (445)
Q Consensus 116 tVp~~~~---------------------~~w~~~~--------~~~g~l~GrG-----~--kg~~aa~l~a~~~l~~~~~ 159 (445)
|||+.+. ..|++++ ..+|.+|||| + |++++++++|+++|++.+.
T Consensus 81 ~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~ 160 (408)
T PRK05469 81 TAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE 160 (408)
T ss_pred CCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC
Confidence 9987541 2343321 1336688888 3 8999999999999988765
Q ss_pred cCCceEEEEEeecCCCCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-CCCC
Q 013332 160 EIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQH 238 (445)
Q Consensus 160 ~l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~~ 238 (445)
.++++|.|+|++|||.+.|++.++.++. ..++.+.++ +.+.|.+.+ .++|..+++|+++|+++|++ .|+.
T Consensus 161 ~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~---~~~~g~~~~----~~~g~~~~~i~v~Gk~~Ha~~~p~~ 231 (408)
T PRK05469 161 IKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVD---GGPLGELEY----ENFNAASAKITIHGVNVHPGTAKGK 231 (408)
T ss_pred CCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEec---CCCcceEEe----ccCceeEEEEEEeeecCCCCCCccc
Confidence 6789999999999995589998875432 345655544 245665543 35688999999999999987 5899
Q ss_pred CCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHH
Q 013332 239 TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQA 318 (445)
Q Consensus 239 g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~ 318 (445)
|.|||..+++++..|+.+..+........+++++.++|| |++|++++|+|+.+.++.+.+.++|++ ++++.+
T Consensus 232 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~--~~~~~~ 303 (408)
T PRK05469 232 MVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQE--IAKKVN 303 (408)
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHH--HHHHHH
Confidence 999999999999998765422211112245788888876 899999999999999999999999999 999887
Q ss_pred Hhh-CCeEEEEecccCC--CCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCC
Q 013332 319 SVQ-RCNATVTFDDKSF--YPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETK 394 (445)
Q Consensus 319 ~~~-~~~~~i~~~~~~~--~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~p 394 (445)
..+ ++++++++..... .++..+++++++.+++++++. |.++. ...+.|++|+++|... +|++++| |
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~giP~v~~g-------p 373 (408)
T PRK05469 304 AKYGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIEPI--IKPIRGGTDGSQLSFMGLPCPNIF-------T 373 (408)
T ss_pred HHcCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCCcE--EecCCCcccHHHHhhCCCceEEEC-------c
Confidence 666 5677776521111 123567889999999999986 87653 2457899999999876 9998754 3
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 395 GKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 395 G~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
|. ..+|++||++++++|..++++|.+++..+++.
T Consensus 374 G~-~~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 374 GG-HNFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred Cc-ccCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 33 34999999999999999999999999988753
No 46
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=5.9e-46 Score=375.68 Aligned_cols=346 Identities=17% Similarity=0.184 Sum_probs=274.1
Q ss_pred HHHHHHHHHHHhCCCC----------CcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC-C-CcEEEEEEecccc
Q 013332 50 YWMVNIRRKIHENPEL----------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDAL 117 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~----------s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~p~i~l~~H~DtV 117 (445)
+++++++++|++|||. |++|.++++||+++|+++||++++. ...|+++++++. + +|+|+|+||+|||
T Consensus 10 ~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~DtV 88 (412)
T PRK12893 10 ERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDTQ 88 (412)
T ss_pred HHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccCC
Confidence 7799999999999964 5558999999999999999999864 457999999553 2 5899999999999
Q ss_pred cCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC------CccHHHHHHccCC---
Q 013332 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLDAGAL--- 188 (445)
Q Consensus 118 p~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg------~~G~~~l~~~~~~--- 188 (445)
|.+ |.+|| |++++++|+|+++|++.+..++++|.|+|++|||+ +.|++++.+....
T Consensus 89 p~~------------g~~dg---k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~ 153 (412)
T PRK12893 89 PTG------------GRFDG---ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDA 153 (412)
T ss_pred CCC------------Ccccc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHH
Confidence 964 34456 46899999999999998878899999999999994 3588877654210
Q ss_pred ----------------------------CCcceeEEecccCC---CCCCceeeccCcccccceEEEEEEEecCCCCCC-C
Q 013332 189 ----------------------------ENVEAIFGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-P 236 (445)
Q Consensus 189 ----------------------------~~~d~~i~~~~~~~---~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~-p 236 (445)
.+.+..+.+|..++ ++.+. ...+..+++|..+++|+++|+++|+|. |
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~aHas~~p 232 (412)
T PRK12893 154 LARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAAHAGTTP 232 (412)
T ss_pred HhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECCCcCCCc
Confidence 01122333332111 00110 011234689999999999999999985 8
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHH
Q 013332 237 Q-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVV 314 (445)
Q Consensus 237 ~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~ 314 (445)
+ .|.|||..+++++.+|+++..+. . ...+++++.|+|| ...|+||++|++++|+|+.|+++.+++.++|++ ++
T Consensus 233 ~~~G~NAI~~a~~~i~~l~~~~~~~-~--~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~--~~ 307 (412)
T PRK12893 233 MAMRRDALVAAARIILAVERIAAAL-A--PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRA--AC 307 (412)
T ss_pred chhccCHHHHHHHHHHHHHHHHHhc-C--CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHH--HH
Confidence 5 79999999999999999875332 1 2468999999974 799999999999999999999999999999999 99
Q ss_pred HHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCC
Q 013332 315 MKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETK 394 (445)
Q Consensus 315 ~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~p 394 (445)
+..+..++++++++. ...++++..|+++++.+++++++. |.++. ....+|+||+++|.+.+|++++ +| |
T Consensus 308 ~~~~~~~~~~v~~~~--~~~~~~~~~d~~l~~~l~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~~p~~v~-~g-----p 376 (412)
T PRK12893 308 AKIAAARGVQVTVET--VWDFPPVPFDPALVALVEAAAEAL-GLSHM--RMVSGAGHDAMFLARVAPAAMI-FV-----P 376 (412)
T ss_pred HHHHHHcCCeEEEEE--EecCCCcCCCHHHHHHHHHHHHHc-CCCcc--ccCCccHHHHHHHHhhCCEEEE-Ee-----e
Confidence 887766777777654 445777788899999999999875 77653 3467899999999988886443 45 3
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 395 GKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 395 G~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
|....+|++||++++++|..++++|++++.+++.
T Consensus 377 ~~~~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~ 410 (412)
T PRK12893 377 CRGGISHNEAEDTEPADLAAGANVLLHAVLELAG 410 (412)
T ss_pred cCCCCCCCccccCCHHHHHHHHHHHHHHHHHhhc
Confidence 3345689999999999999999999999998864
No 47
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=6.1e-46 Score=375.28 Aligned_cols=347 Identities=16% Similarity=0.181 Sum_probs=274.6
Q ss_pred HHHHHHHHHHHhC-C---------CCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC--CCcEEEEEEecccc
Q 013332 50 YWMVNIRRKIHEN-P---------ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDAL 117 (445)
Q Consensus 50 ~~~~~ll~~l~~i-p---------s~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~--~~p~i~l~~H~DtV 117 (445)
+.+++++++|++| + |+|++|.++++||+++|+++||++++. .+.|++++++++ ++|+|+|+||+|||
T Consensus 7 ~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 7 ERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccCC
Confidence 7788999999998 3 778999999999999999999999864 468999999653 25899999999999
Q ss_pred cCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCC------ccHHHHHHccC----
Q 013332 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLDAGA---- 187 (445)
Q Consensus 118 p~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~l~~~~~---- 187 (445)
|++. .++| |+++|+++.|+++|++.+..++++|.|++++|||++ .|++.+++...
T Consensus 86 p~~g------------~~d~---k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~ 150 (413)
T PRK09290 86 PNGG------------RFDG---PLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDA 150 (413)
T ss_pred CCCC------------CcCC---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHH
Confidence 9743 2233 679999999999999888778999999999999942 57877753210
Q ss_pred ------------------CCCcceeEEe--ccc-----------C---CCCCCceeeccCcccccceEEEEEEEecCCCC
Q 013332 188 ------------------LENVEAIFGL--HVS-----------S---LFPVGTVASRPGPTLAAGGFFEAVINGKGGHA 233 (445)
Q Consensus 188 ------------------~~~~d~~i~~--~~~-----------~---~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Ha 233 (445)
-.+.|++++. +|. . .+|++.. .....++||..+++|+++|+++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~-~~i~~~~kG~~~~~i~v~Gk~aHa 229 (413)
T PRK09290 151 LALRDADGVSFAEALAAIGYDGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLP-IGVVTGIVGQRRYRVTFTGEANHA 229 (413)
T ss_pred HhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeccCHHHHHCCCc-EEEEeeeeccEEEEEEEEEECCCC
Confidence 0123444431 010 0 0222211 112356899999999999999999
Q ss_pred C-CC-CCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHHHHHHHHh
Q 013332 234 A-IP-QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEE 310 (445)
Q Consensus 234 s-~p-~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~ 310 (445)
| .| +.|.|||..+++++.+|+++..+.. ...+++++.+++| .+.|+||++|++++|+|+.|+++.+.+.++|++
T Consensus 230 s~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~ 306 (413)
T PRK09290 230 GTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRA 306 (413)
T ss_pred CCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHH
Confidence 8 68 5899999999999999988753221 2468999999975 799999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCC
Q 013332 311 WQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMN 390 (445)
Q Consensus 311 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~ 390 (445)
+++..+...++++++.. ...+|++.+|+++++.+++++++. |.++. ....+|++|+++|...+|++++ +|
T Consensus 307 --~~~~~~~~~~~~~e~~~--~~~~~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~iP~~~~-~g-- 376 (413)
T PRK09290 307 --AAEAIAARRGVEVEIEL--ISRRPPVPFDPGLVAALEEAAERL-GLSYR--RLPSGAGHDAQILAAVVPTAMI-FV-- 376 (413)
T ss_pred --HHHHHHHHcCCeEEEEE--EecCCCccCCHHHHHHHHHHHHHc-CCCcc--ccCCccchHHHHHhccCCEEEE-Ee--
Confidence 99887766677777765 445777778899999999999876 76543 3467899999999777998553 34
Q ss_pred CCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 391 DETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 391 ~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
||....+|++||++++++|..++++|++++.++++.
T Consensus 377 ---p~~~~~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~~ 412 (413)
T PRK09290 377 ---PSVGGISHNPAEFTSPEDCAAGANVLLHALLELAEE 412 (413)
T ss_pred ---ccCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhcc
Confidence 333356899999999999999999999999998753
No 48
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=9.2e-47 Score=371.42 Aligned_cols=327 Identities=13% Similarity=0.106 Sum_probs=258.1
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCccccCCCC
Q 013332 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPG 133 (445)
Q Consensus 54 ~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g 133 (445)
+++++|++|||+|++|.++++||+++|+++|+++.. +..+|+++..+++ +|+|+|+|||||||. .|+. .++||
T Consensus 1 ~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~-~~~~~~~~~~~~~-~~~i~~~~H~D~vp~----~~~~-~~~~g 73 (336)
T TIGR01902 1 ELLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLII-DDAGNFILGKGDG-HKKILLAGHVDTVPG----YIPV-KIEGG 73 (336)
T ss_pred ChHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEE-CCCCcEEEEeCCC-CceEEEEccccccCC----Cccc-EEeCC
Confidence 368999999999999999999999999999999854 3457998877443 599999999999984 3544 35789
Q ss_pred ccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCcee
Q 013332 134 KMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVA 209 (445)
Q Consensus 134 ~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~ 209 (445)
++||||+ |+++++++.|++.|++. .++|.|++++||| ++.|+++++++.. .+++++. +|++.-.
T Consensus 74 ~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~-----ept~~~~ 141 (336)
T TIGR01902 74 LLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVG-----EPSGAEG 141 (336)
T ss_pred EEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEe-----cCCCCcc
Confidence 9999998 89999999999999754 3689999999999 6689999998753 2466653 3444211
Q ss_pred eccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEE
Q 013332 210 SRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTI 289 (445)
Q Consensus 210 ~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~ 289 (445)
...+++|..+++++++|+++|+|.|. ||+..+.+++..|.+..... ......+++++.++||.+.|+||++|++
T Consensus 142 --i~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~gg~~~nvIP~~a~~ 215 (336)
T TIGR01902 142 --ITLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQP-ENYDKPSIVPTIIRFGESYNDTPAKLEL 215 (336)
T ss_pred --eeeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhccc-cCCCCCcceeEEEEccCCCcCCCceEEE
Confidence 13467899999999999999999885 59999999999987322111 1122457899999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCC
Q 013332 290 GGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPL 367 (445)
Q Consensus 290 ~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~ 367 (445)
++|+|+.|+++.+++.+++++ . .. ++++. ...++|+ +.|+++++.+++++++. +.++. ....
T Consensus 216 ~idiR~~p~~~~~~~~~~i~~--~-------~~--~~~~~--~~~~~p~~~~~~~~lv~~~~~a~~~~-~~~~~--~~~~ 279 (336)
T TIGR01902 216 HFDLRYPPNNKPEEAIKEITD--K-------FP--ICLEI--VDETPPYKVSRNNPLVRAFVRAIRKQ-GMKPR--LKKK 279 (336)
T ss_pred EEEEeeCCCCCHHHHHHHHHh--c-------cC--ceEEE--EeccCceecCCCCHHHHHHHHHHHHc-CCCeE--Eeec
Confidence 999999999999888766655 2 12 33333 2234444 45788999999999987 55542 2346
Q ss_pred CccchHHHHHhh--cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 368 MGTEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 368 ~g~tD~~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
.|++|++++.+. +|++. || ||....+|++||+++++++.+++++|.+++..++.
T Consensus 280 ~g~tD~~~~~~~~g~p~v~--~G-----pg~~~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~ 335 (336)
T TIGR01902 280 TGTSDMNILAPIWTVPMVA--YG-----PGDSTLDHTPQEKISLAEYLIGIKTLMLAIEELWQ 335 (336)
T ss_pred cccCccceeccccCCCeEE--EC-----CCCcccCCCCcceeEHHHHHHHHHHHHHHHHHHhc
Confidence 788999999875 67664 56 56556799999999999999999999999988864
No 49
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=6e-46 Score=384.19 Aligned_cols=357 Identities=15% Similarity=0.149 Sum_probs=268.5
Q ss_pred CchhHHHHHHHHHHHHhCCCCCc-----ch----HHHHHHHHHHHHhCCCCeeeccCCceEE--EEEcCCCCcEEEEEEe
Q 013332 45 KPEIFYWMVNIRRKIHENPELGF-----QE----FETSKLIRAELDQMGIPYKFPVAVTGVV--GYIGTGQPPFVALRAD 113 (445)
Q Consensus 45 ~~~~~~~~~~ll~~l~~ips~s~-----~E----~~~a~~l~~~l~~~G~~~~~~~~~~nvi--a~~~~~~~p~i~l~~H 113 (445)
+++ +++++++++|++|||++. +| .++++||.++|+++|++++. ..|++ +++++...|+|+|+||
T Consensus 43 ~~~--~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~---~~~~v~~~~~~g~~~~~l~l~gH 117 (520)
T PRK06156 43 KYG--AAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRN---VDNRVLEIGLGGSGSDKVGILTH 117 (520)
T ss_pred hhH--HHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEe---cCCeEEEEEecCCCCCeEEEEEe
Confidence 444 899999999999999984 23 35689999999999999864 24544 6666444589999999
Q ss_pred cccccCCCCCCCcc-----c----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHH
Q 013332 114 MDALAMEESVEWEH-----K----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAK 180 (445)
Q Consensus 114 ~DtVp~~~~~~w~~-----~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~ 180 (445)
|||||++. .+|.+ + .++||+|||||+ |++++++++|++.|++.+.+++++|.|+|++||| ++.|++
T Consensus 118 ~DvVp~~~-~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~ 196 (520)
T PRK06156 118 ADVVPANP-ELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLK 196 (520)
T ss_pred cCccCCCC-ccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHH
Confidence 99999975 46876 4 356899999998 8999999999999998887788999999999999 678999
Q ss_pred HHHHccCCCCcceeEEeccc----CCCCC-----------------------------Cce------eecc---------
Q 013332 181 KMLDAGALENVEAIFGLHVS----SLFPV-----------------------------GTV------ASRP--------- 212 (445)
Q Consensus 181 ~l~~~~~~~~~d~~i~~~~~----~~~p~-----------------------------g~~------~~~~--------- 212 (445)
++++++. ..++.++.+.+ .++|+ +.+ .+..
T Consensus 197 ~~~~~~~--~~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~ 274 (520)
T PRK06156 197 YYLERYT--PPDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAA 274 (520)
T ss_pred HHHHhcC--CCCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHH
Confidence 9988754 22333221100 01111 000 0000
Q ss_pred --------Ccccccce---------EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc----------------
Q 013332 213 --------GPTLAAGG---------FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR---------------- 259 (445)
Q Consensus 213 --------g~~~~G~~---------~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~---------------- 259 (445)
..+++|.. |++|+++|+++|+|.|+.|.|||..+++++.+|++....
T Consensus 275 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~ 354 (520)
T PRK06156 275 LQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGL 354 (520)
T ss_pred HHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCC
Confidence 01123444 899999999999999999999999999999998752100
Q ss_pred -----------cCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEE
Q 013332 260 -----------EADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVT 328 (445)
Q Consensus 260 -----------~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~ 328 (445)
.....+..+++++.|.+|. +.|++++|+|++|+++.++++++|++ .++......++++++.
T Consensus 355 ~~~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~--~i~~~~~~~gv~ve~~ 426 (520)
T PRK06156 355 DYLGEKFGVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIAD--ALAAWQAKHQVALDID 426 (520)
T ss_pred CCccCcCCccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHH--HHHHHHhhcCceEEEe
Confidence 0111245678888888875 58999999999999999999999999 8887655556666554
Q ss_pred ecccCCCCc-ccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCC
Q 013332 329 FDDKSFYPV-TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRV 407 (445)
Q Consensus 329 ~~~~~~~~~-~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v 407 (445)
. ....|. ...++++++.+++++++.+|.++. +...+|+||++++. ++ +.|||.. ||....+|++|||+
T Consensus 427 ~--~~~~p~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~ggTDa~~~~---~~--v~fGP~~--~g~~~~aHt~dE~V 495 (520)
T PRK06156 427 Y--YWGEPMVRDPKGPWLKTLLDVFGHFTGLDAK--PVAIAGSTNAKLFP---NA--VSFGPAM--PGVKYTGHTENEFK 495 (520)
T ss_pred e--cCCCceeeCCCCHHHHHHHHHHHHHhCCCCc--eeeecChhhhhhCC---cc--EEEcCCC--CCCCCCCcCcccCC
Confidence 3 222222 244678999999999998888663 35688999998874 33 3467543 45555799999999
Q ss_pred CCCchHHHHHHHHHHHHHHHh
Q 013332 408 NEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 408 ~i~~l~~~~~~~~~~i~~l~~ 428 (445)
+++++..++++|++++.+++.
T Consensus 496 ~ie~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 496 TVEQFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred CHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999985
No 50
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=5.7e-46 Score=378.78 Aligned_cols=354 Identities=13% Similarity=0.067 Sum_probs=260.6
Q ss_pred HHHHHHHHHHHhCCCCCcch----------HHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccC
Q 013332 50 YWMVNIRRKIHENPELGFQE----------FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM 119 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E----------~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~ 119 (445)
+++++++++|++|||+|+++ .++++|+.++|+++||++++.....+++++++.+ +|+|+|+||+||||+
T Consensus 11 ~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~~-~~~lll~gH~DvVp~ 89 (444)
T PRK07205 11 DACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQG-EELLAILCHLDVVPE 89 (444)
T ss_pred HHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecCC-CcEEEEEEeeccCCC
Confidence 88999999999999999765 5688899999999999987754345677777543 489999999999999
Q ss_pred CCCCCCcc---c-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCC--
Q 013332 120 EESVEWEH---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALE-- 189 (445)
Q Consensus 120 ~~~~~w~~---~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~-- 189 (445)
++.+.|.+ . .++||+|||||+ ||+++++|.|+++|++.+..++++|.|+|++||| ++.|++.+++.....
T Consensus 90 ~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~~~~ 169 (444)
T PRK07205 90 GDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQATM 169 (444)
T ss_pred CCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCCCCe
Confidence 88778954 3 477999999998 8999999999999999888889999999999999 668988888742110
Q ss_pred --Ccc----eeEEec-----ccCCCCCCceee--------ccCc---------------ccccc----eEEEEEEEecCC
Q 013332 190 --NVE----AIFGLH-----VSSLFPVGTVAS--------RPGP---------------TLAAG----GFFEAVINGKGG 231 (445)
Q Consensus 190 --~~d----~~i~~~-----~~~~~p~g~~~~--------~~g~---------------~~~G~----~~~~i~~~G~~~ 231 (445)
..| .++... .-.++|+..... .+.. .++|. .+.+|+++|+++
T Consensus 170 ~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~~~ 249 (444)
T PRK07205 170 GFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGKSV 249 (444)
T ss_pred eECCCCCCceEEEEeceEEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEeEEc
Confidence 011 011000 000223322111 1110 11231 234999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhc-----c--------------cCC-CCCCeeEEEEEEEcCCccccccCcEEEEE
Q 013332 232 HAAIPQHTIDPIVAASNVIVSLQHLVS-----R--------------EAD-PLDSQVLTVAKFEGGGAFNIIPDSVTIGG 291 (445)
Q Consensus 232 Has~p~~g~NAi~~~~~~i~~l~~~~~-----~--------------~~~-~~~~~t~~i~~i~gG~~~NviP~~a~~~~ 291 (445)
|||.|+.|.|||..+++++.+++.... + ..+ ..+.+++|++. .|+||++|++++
T Consensus 250 Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~------~nvvP~~a~~~l 323 (444)
T PRK07205 250 HAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG------LTITKEKSEIRI 323 (444)
T ss_pred ccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE------EEEECCEEEEEE
Confidence 999999999999999999988864310 0 001 13456777766 489999999999
Q ss_pred EEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCc
Q 013332 292 TFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMG 369 (445)
Q Consensus 292 diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g 369 (445)
|+|++|+++.+++.+.|++ +++. .+.++ .. ...++++ +.++++++.+.+++++.+|.+.. ....+|
T Consensus 324 d~R~~p~~~~e~v~~~i~~--~~~~----~~v~~--~~--~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~--~~~~gg 391 (444)
T PRK07205 324 DIRIPVLADKEKLVQQLSQ--KAQE----YGLTY--EE--FDYLAPLYVPLDSELVSTLMSVYQEKTGDDSP--AQSSGG 391 (444)
T ss_pred EEeCCCCCCHHHHHHHHHH--HHHH----cCcEE--EE--ecCCCceeeCCCcHHHHHHHHHHHHHhCCCCc--eEEecc
Confidence 9999999999999999999 7653 23333 32 2233443 45788999999999998787542 234555
Q ss_pred cchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 370 TEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 370 ~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
++|+..+ .|++ .+|+.+ ||+...+|++|||++++++.+++++|++++.+++++
T Consensus 392 ~~~~~~~---~~~i--~~G~~~--Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~~ 444 (444)
T PRK07205 392 ATFARTM---PNCV--AFGALF--PGAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLTTD 444 (444)
T ss_pred HHHHHhC---CCcE--EECCcc--CCCCCCCcCcccCccHHHHHHHHHHHHHHHHHHhcC
Confidence 5654432 3443 467665 676678999999999999999999999999998753
No 51
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.3e-44 Score=365.45 Aligned_cols=347 Identities=16% Similarity=0.127 Sum_probs=272.7
Q ss_pred HHHHHHHHHHhC---C-------CCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC-C-CcEEEEEEeccccc
Q 013332 51 WMVNIRRKIHEN---P-------ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDALA 118 (445)
Q Consensus 51 ~~~~ll~~l~~i---p-------s~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~p~i~l~~H~DtVp 118 (445)
++++.+..|-+| | +.+++|.++++||+++|+++|++++++ ..+|+++++.+. + +|+|+|+||+||||
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtVp 89 (414)
T PRK12891 11 RLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQP 89 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCCC
Confidence 455666666665 2 335679999999999999999999875 467999999653 2 48999999999999
Q ss_pred CCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCC------ccHHHH----------
Q 013332 119 MEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKM---------- 182 (445)
Q Consensus 119 ~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~l---------- 182 (445)
.+.. ...|++++++|+|++.|++.+.+++++|.|++++|||++ .|++.+
T Consensus 90 ~gg~---------------~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~ 154 (414)
T PRK12891 90 TGGR---------------YDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLL 154 (414)
T ss_pred CCcc---------------ccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHH
Confidence 7531 134789999999999999999899999999999999953 477533
Q ss_pred --------------HHccCCC-------CcceeEEecccCC---CCCCceeeccCcccccceEEEEEEEecCCCCC-CCC
Q 013332 183 --------------LDAGALE-------NVEAIFGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQ 237 (445)
Q Consensus 183 --------------~~~~~~~-------~~d~~i~~~~~~~---~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~ 237 (445)
.+.|+.. +.++.+.+|.+++ ++.+.. .....+++|..+++|+++|+++|+| .|+
T Consensus 155 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~~-~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~ 233 (414)
T PRK12891 155 SRRDDTGRTLGEHLARIGYAGAEPVGGYPVHAAYELHIEQGAILERAGKT-IGVVTAGQGQRWYEVTLTGVDAHAGTTPM 233 (414)
T ss_pred hccCCCCCCHHHHHHHCCCCcccccccCCCCEEEEEEeCCCHHHHHCCCc-EEEEeeccCcEEEEEEEEeECCCCCCCCc
Confidence 3434311 1234455554433 222211 1123568999999999999999998 686
Q ss_pred -CCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHH
Q 013332 238 -HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVM 315 (445)
Q Consensus 238 -~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 315 (445)
.|.|||..++++|..|+++..+. ....++|++.|+|| .+.|+||++|++++|+|+.|.++.+.+.++|++ +++
T Consensus 234 ~~g~nAI~~aa~~i~~l~~~~~~~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~--~~~ 308 (414)
T PRK12891 234 AFRRDALVGAARMIAFLDALGRRD---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRA--ELA 308 (414)
T ss_pred ccccCHHHHHHHHHHHHHHHHHhc---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHH--HHH
Confidence 58999999999999999875321 13469999999997 699999999999999999999999999999999 998
Q ss_pred HHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCC
Q 013332 316 KQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKG 395 (445)
Q Consensus 316 ~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG 395 (445)
..+..++++++++. ...+|++.+|+++++.+++++++. |.+.. ....+|++|++++...+|++++ +| ||
T Consensus 309 ~~~~~~~~~~~~~~--~~~~~~~~~d~~lv~~l~~a~~~~-G~~~~--~~~~~ggtDa~~~~~giPt~~~-~g-----p~ 377 (414)
T PRK12891 309 RIADETGLRADIEQ--IFGYAPAPFAPGCIDAVRDAARAL-GLSHM--DIVSGAGHDACFAARGAPTGMI-FV-----PC 377 (414)
T ss_pred HHHHHhCCEEEEEE--EecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcchHHHHHHHhhCCEEEE-EE-----cC
Confidence 88777788877766 456777788899999999998765 87653 2467899999988767998543 45 44
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhc
Q 013332 396 KFETGHSPYFRVNEDALPYGAALHASLATRYLLEN 430 (445)
Q Consensus 396 ~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~~ 430 (445)
....+|++||++++++|..++++|+.++.++....
T Consensus 378 ~~~~aH~~dE~v~i~~l~~~~~il~~~l~~~~~~~ 412 (414)
T PRK12891 378 VDGLSHNEAEAITPEWFAAGADVLLRAVLQSAQEA 412 (414)
T ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHHHhhhc
Confidence 44578999999999999999999999999987654
No 52
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=2e-45 Score=370.66 Aligned_cols=348 Identities=15% Similarity=0.137 Sum_probs=269.8
Q ss_pred HHHHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhCCCC-eeeccCCceEEEEEcCCCC---cEEEEEEecc
Q 013332 50 YWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTGQP---PFVALRADMD 115 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~----------~E~~~a~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~~~---p~i~l~~H~D 115 (445)
+.+++.+.++++|+|.|+ .|.+++++|+++|+++|++ ++++++.+||+|++++..+ |+|+|.+|||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 568899999999999997 5568999999999999997 7766447899999965433 9999999999
Q ss_pred cccCCCCC-------------------------CCccc----------c-CCCCccccCcchHHHHHHHHHHHHHHhccc
Q 013332 116 ALAMEESV-------------------------EWEHK----------S-KVPGKMHACGHDAHVAMLLGAAKMLQVFRH 159 (445)
Q Consensus 116 tVp~~~~~-------------------------~w~~~----------~-~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~ 159 (445)
|||..... .|.|+ . ..++.+||+.+|+++|++|.|++.|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99843221 34332 1 345699998899999999999999988643
Q ss_pred cCCceEEEEEeecCCCCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCC-CC
Q 013332 160 EIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIP-QH 238 (445)
Q Consensus 160 ~l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p-~~ 238 (445)
.++++|.|+|++|||.+.|++.+..++. +.++.+.+. ++|+|.+.++ .+|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~---gep~g~i~~~----~~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVD---GGPLGELEYE----TFSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeC---CCCCCeEEEc----cccceEEEEEEEEEecCcccChHH
Confidence 4689999999999996578888865443 345555443 4688876543 357899999999999999965 68
Q ss_pred CCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHH
Q 013332 239 TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQA 318 (445)
Q Consensus 239 g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~ 318 (445)
+.|||..+.+++..+.... .+ ..++-+++.+++|. .|.||++|++++|+|+.+.++.+.+.++|++ ++++.+
T Consensus 234 g~nAi~~a~~~~~~l~~~~----~~-~~t~~~~g~i~~g~-i~giPd~a~l~~diR~~~~e~~e~i~~~i~~--i~~~~~ 305 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDD----RP-EYTEGREGFFHLLS-IDGTVEEAKLHYIIRDFEKENFQERKELMKR--IVEKMN 305 (410)
T ss_pred HHHHHHHHHHHHHhcCCcC----CC-ccccceeEEEEEEe-EEEecCEEEEEEEEecCCHHHHHHHHHHHHH--HHHHHH
Confidence 9999999998877665431 01 11111234556653 6779999999999999999999999999999 998887
Q ss_pred HhhCC-eEEEEecccCCCC----cccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCC
Q 013332 319 SVQRC-NATVTFDDKSFYP----VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDE 392 (445)
Q Consensus 319 ~~~~~-~~~i~~~~~~~~~----~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~ 392 (445)
..+++ .+++++ ...++ ...+++++++.+++++++. |.++. .....|+||+++|+.. +|++.+ |
T Consensus 306 ~~~g~~~v~~~~--~~~~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~~--~~~~~ggtDa~~~~~~Gip~~~~--G---- 374 (410)
T TIGR01882 306 NEYGQDRIKLDM--NDQYYNMAEKIEKVMEIVDIAKQAMENL-GIEPK--ISPIRGGTDGSQLSYMGLPTPNI--F---- 374 (410)
T ss_pred HHcCCceEEEEE--EeeecChhhccCCCHHHHHHHHHHHHHh-CCCCc--ccccceechHHHHHhCCCCCCeE--c----
Confidence 66663 455554 22232 3457889999999999986 87653 3457899999999887 898765 4
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 393 TKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 393 ~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
||. ..+|++|||+++++|.+++++|.+++..+.
T Consensus 375 -~G~-~~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 375 -AGG-ENMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred -CCc-ccCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 444 459999999999999999999999998764
No 53
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=8.5e-44 Score=359.90 Aligned_cols=343 Identities=15% Similarity=0.149 Sum_probs=266.4
Q ss_pred HHHHHHHHHHHhCC---------CCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC--CCcEEEEEEeccccc
Q 013332 50 YWMVNIRRKIHENP---------ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDALA 118 (445)
Q Consensus 50 ~~~~~ll~~l~~ip---------s~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~--~~p~i~l~~H~DtVp 118 (445)
+.+++.+..|.+|| |+|++|.++++||.++|+++||++++. ...|+++++++. ++|+|+|+||+||||
T Consensus 9 ~~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp 87 (414)
T PRK12890 9 ERLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVP 87 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCC
Confidence 34556666666555 789999999999999999999999875 467999999654 358999999999999
Q ss_pred CCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC-C-----ccHHHHHHc-------
Q 013332 119 MEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-----GGAKKMLDA------- 185 (445)
Q Consensus 119 ~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-----~G~~~l~~~------- 185 (445)
++. ..+ .|++++++|.+++.|++.+..++++|.|++++|||+ + .|++.+.+.
T Consensus 88 ~~g------------~~D---~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~ 152 (414)
T PRK12890 88 NGG------------RYD---GILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVL 152 (414)
T ss_pred CCC------------CcC---CHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHH
Confidence 742 222 267999999999999988878899999999999994 2 577665432
Q ss_pred -----------------cCCCCccee-------------EEecccCC---CCCCceeeccCcccccceEEEEEEEecCCC
Q 013332 186 -----------------GALENVEAI-------------FGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGH 232 (445)
Q Consensus 186 -----------------~~~~~~d~~-------------i~~~~~~~---~p~g~~~~~~g~~~~G~~~~~i~~~G~~~H 232 (445)
|. ..|.+ +.+|...+ .+.+. ......+++|..|++|+++|+++|
T Consensus 153 ~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aH 229 (414)
T PRK12890 153 ATRDDDGTTLAEALRRIGG--DPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANH 229 (414)
T ss_pred hccCCCCCCHHHHHHHcCC--ChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCC
Confidence 11 11221 11111110 00111 011234689999999999999999
Q ss_pred CCC-CC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHHHHHHHH
Q 013332 233 AAI-PQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIE 309 (445)
Q Consensus 233 as~-p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~ 309 (445)
+|. |+ .+.|||..+++++.+|+++..+.. ...+++++.|++| .+.|+||++|++++|+|+.|+++.+.+.++|+
T Consensus 230 as~~P~~~g~nAI~~~~~~i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~ 306 (414)
T PRK12890 230 AGTTPMDLRRDALVAAAELVTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALL 306 (414)
T ss_pred CCcCChhhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHH
Confidence 984 85 458999999999999998753321 4578899999974 89999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecC
Q 013332 310 EWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGM 389 (445)
Q Consensus 310 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~ 389 (445)
+ ++++.+...+++++++. ...++++..++++++.+.+++++. |.++. ....+|+||+++|.+..|.+++ +|
T Consensus 307 ~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~gp~~~~-~g- 377 (414)
T PRK12890 307 A--ELEAIAAARGVRIELER--LSRSEPVPCDPALVDAVEAAAARL-GYPSR--RMPSGAGHDAAAIARIGPSAMI-FV- 377 (414)
T ss_pred H--HHHHHHHHhCCeEEEEE--eecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcccHHHHHHHhhCCEEEE-Ee-
Confidence 9 99887766677777765 456777788899999999999885 87653 3457899999999987766543 45
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 390 NDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 390 ~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
||....+|++||++++++|..++++|+.++.++.
T Consensus 378 ----p~~~~~aHs~dE~v~i~~l~~~~~i~~~ll~~l~ 411 (414)
T PRK12890 378 ----PCRGGISHNPEEAMDPEDLAAGARVLLDAVLRLD 411 (414)
T ss_pred ----cCCCCCCCCcCccCCHHHHHHHHHHHHHHHHHHh
Confidence 4444569999999999999999999999998874
No 54
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=3.4e-43 Score=353.78 Aligned_cols=330 Identities=18% Similarity=0.200 Sum_probs=260.0
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC-C-CcEEEEEEecccccCCCCCCCccccCCCCccccCcch
Q 013332 64 ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHD 141 (445)
Q Consensus 64 s~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k 141 (445)
|.|++|.++++||+++|+++|++++++ ..+|++++++++ + +|+|+|+||+||||.+ |++||+
T Consensus 25 ~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg~--- 88 (401)
T TIGR01879 25 ALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDGQ--- 88 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCCH---
Confidence 346789999999999999999999865 468999999754 2 4899999999999964 455665
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEeecCCC------CccHHHHHHccC------C---------------------
Q 013332 142 AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLDAGA------L--------------------- 188 (445)
Q Consensus 142 g~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg------~~G~~~l~~~~~------~--------------------- 188 (445)
.+++++|.+++.|++.+.+++++|.|++++|||+ ..|++.++.... +
T Consensus 89 ~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 168 (401)
T TIGR01879 89 LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPN 168 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 4789999999999999988999999999999995 268888764210 0
Q ss_pred ------CCcceeEEecccCC---CCCCceeeccCcccccceEEEEEEEecCCCCCC-CC-CCCCHHHHHHHHHHHHHHhh
Q 013332 189 ------ENVEAIFGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-PQ-HTIDPIVAASNVIVSLQHLV 257 (445)
Q Consensus 189 ------~~~d~~i~~~~~~~---~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~-p~-~g~NAi~~~~~~i~~l~~~~ 257 (445)
.++++.+.+|.+.+ ++.|.. ..+..+++|..|++|+++|+++|++. |+ .+.|||..+++++.+|+++.
T Consensus 169 ~~~~~~~~~~~~~e~Hieqg~~l~~~g~~-~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~ 247 (401)
T TIGR01879 169 QPLRPRGDIKAYVELHIEQGPVLESNGQP-IGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKA 247 (401)
T ss_pred ccccccccccEEEEEEEcCCcChhhCCCe-EEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 01122333443322 111211 12234688999999999999999985 54 57999999999999999875
Q ss_pred cccCCCCCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCC
Q 013332 258 SREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYP 336 (445)
Q Consensus 258 ~~~~~~~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 336 (445)
.+.. ...+.+++.|++| .+.|+||++|++.+|+|+.|+++.+++.++|++ +++..+...+++++++. ...++
T Consensus 248 ~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~--~~~~~~~~~~~~~~~~~--~~~~~ 320 (401)
T TIGR01879 248 KRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLEN--DIKAISDERDIGIDIER--WMDEE 320 (401)
T ss_pred HhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHH--HHHHHHHHcCceEEEEE--eecCC
Confidence 4321 2357899999985 779999999999999999999999999999999 99887766777777765 44577
Q ss_pred cccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 013332 337 VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 416 (445)
Q Consensus 337 ~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~ 416 (445)
++..|+++++.+++++++. |.++. ...++++||+++|.+..|..+ .|| ||....+|++||+++++++.+++
T Consensus 321 ~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~ggtDa~~~~~~~~~~v-~fg-----Pg~~~~aH~~dE~v~~e~l~~~~ 391 (401)
T TIGR01879 321 PVPCSEELVAALTELCERL-GYNAR--VMVSGAGHDAQILAPIVPIGM-IFI-----PSINGISHNPAEWSNITDCAEGA 391 (401)
T ss_pred CcCCCHHHHHHHHHHHHHc-CCCcc--ccccchHHHHHHHHhhCCEEE-EEe-----cCCCCCcCCCCccCCHHHHHHHH
Confidence 7788999999999999886 77653 346789999999998754333 356 55556799999999999999999
Q ss_pred HHHHHHHHHH
Q 013332 417 ALHASLATRY 426 (445)
Q Consensus 417 ~~~~~~i~~l 426 (445)
++|++++.++
T Consensus 392 ~vl~~~i~~l 401 (401)
T TIGR01879 392 KVLYLMVYQL 401 (401)
T ss_pred HHHHHHHHhC
Confidence 9999998753
No 55
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=2.7e-43 Score=357.36 Aligned_cols=343 Identities=14% Similarity=0.107 Sum_probs=253.2
Q ss_pred HHHHHHHHHHHhCCCCCcc------------hHHHHHHHHHHHHhCCCCeeeccCCceEEEE--EcCCCCcEEEEEEecc
Q 013332 50 YWMVNIRRKIHENPELGFQ------------EFETSKLIRAELDQMGIPYKFPVAVTGVVGY--IGTGQPPFVALRADMD 115 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~------------E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~--~~~~~~p~i~l~~H~D 115 (445)
+++++++++|++|||++.+ +.++++|+.++|+++|++++.. .|+++. +++ ..|+|+|+||+|
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~---~~~~~~~~~~~-~~~~l~l~gH~D 77 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENV---DNYAGYAEYGQ-GEEYLGILGHLD 77 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEe---cCceEEEEeCC-CCCeEEEEeecC
Confidence 5689999999999999832 4689999999999999998743 344433 332 248999999999
Q ss_pred cccCCCCCCCcc---c-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccC
Q 013332 116 ALAMEESVEWEH---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA 187 (445)
Q Consensus 116 tVp~~~~~~w~~---~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~ 187 (445)
|||+++ .|.+ . .++||+|||||+ ||++++++.|++.|++.+.+++++|.|+|++||| ++.|+++++++..
T Consensus 78 ~Vp~~~--~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 155 (447)
T TIGR01887 78 VVPAGD--GWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEE 155 (447)
T ss_pred CCCCCC--CCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcC
Confidence 999975 6854 3 467899999998 8999999999999999887889999999999999 6689999887632
Q ss_pred CC----Ccc----eeEEec---------------------ccCCCCCCcee--eccCcccc-------------------
Q 013332 188 LE----NVE----AIFGLH---------------------VSSLFPVGTVA--SRPGPTLA------------------- 217 (445)
Q Consensus 188 ~~----~~d----~~i~~~---------------------~~~~~p~g~~~--~~~g~~~~------------------- 217 (445)
.. ..| ++++.. ...++|++.+. .....+++
T Consensus 156 ~~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~ 235 (447)
T TIGR01887 156 APDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELE 235 (447)
T ss_pred CCCEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcc
Confidence 11 012 222210 01244555421 00001122
Q ss_pred cce-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH--Hhhcc---------------------c-CCCCCCee
Q 013332 218 AGG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ--HLVSR---------------------E-ADPLDSQV 268 (445)
Q Consensus 218 G~~-----~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~--~~~~~---------------------~-~~~~~~~t 268 (445)
|.. +++|+++|+++|||.|+.|.|||..|++++..++ +...+ . ...++.++
T Consensus 236 g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t 315 (447)
T TIGR01887 236 GSFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLT 315 (447)
T ss_pred eEEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcE
Confidence 555 8999999999999999999999999999999986 21000 0 01134678
Q ss_pred EEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCc-c-cCCHHHHH
Q 013332 269 LTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPV-T-VNNKNLHE 346 (445)
Q Consensus 269 ~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~-~~d~~l~~ 346 (445)
+|++.|+|| +|++|++++|+|++|+++.+++++++.. .+. +. ..+.. ....++ + +.++++++
T Consensus 316 ~nvg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~--~~~------~~-~~~~~--~~~~~p~~~~~~~~lv~ 379 (447)
T TIGR01887 316 MNVGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELA--KES------GI-VEVTE--NGYLKPLYVPKDDPLVQ 379 (447)
T ss_pred EEEEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHH--Hhh------Cc-EEEEE--ccCCCCeEECCCCHHHH
Confidence 999999988 3899999999999999999987777666 432 11 22222 112222 2 44678999
Q ss_pred HHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013332 347 HFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 423 (445)
Q Consensus 347 ~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i 423 (445)
.+.+++++.+|.++. ....+|+||++++. . .+.+||.. ||+..++|++||++++++|..++++|.+++
T Consensus 380 ~l~~~~~~~~g~~~~--~~~~~ggtda~~~~----~-~i~~Gp~~--pG~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 380 TLMKVYEKQTGDEGT--PVAIGGGTYARLME----N-GVAFGALF--PGEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred HHHHHHHHHhCCCCC--eeEecchhhhhhCC----C-cEEeCCCC--CCCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 999999998887653 34567888877653 3 24578766 787788999999999999999999998763
No 56
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=7e-43 Score=358.67 Aligned_cols=348 Identities=18% Similarity=0.170 Sum_probs=260.6
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC----CCcEEEEEEecccccCCCC---
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEES--- 122 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~----~~p~i~l~~H~DtVp~~~~--- 122 (445)
+++++++++|++|||+|++|.++++||+++|+++|++++++. .+|+++++++. ..|+|+|.|||||||.+..
T Consensus 4 ~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~ 82 (477)
T TIGR01893 4 SRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQDE-VGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSL 82 (477)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEeC-CCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCC
Confidence 678999999999999999999999999999999999988654 57999998542 2489999999999998753
Q ss_pred CCCccc----cCCCCccccCcc------hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCc
Q 013332 123 VEWEHK----SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (445)
Q Consensus 123 ~~w~~~----~~~~g~l~GrG~------kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~ 191 (445)
..|..+ .++||++||||+ |++++++|.+++. .+ .++++|.++|++||| ++.|++.+..... ..
T Consensus 83 ~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~ 156 (477)
T TIGR01893 83 HDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SG 156 (477)
T ss_pred CCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CC
Confidence 357533 367899999996 5888888877653 33 356799999999999 5589999976432 23
Q ss_pred ceeEEecccC------CCCCCce---e--eccCcccccceEEEEEEEe-cCCCCC-CCCCCC-CHHHHHHHHHHHHHHhh
Q 013332 192 EAIFGLHVSS------LFPVGTV---A--SRPGPTLAAGGFFEAVING-KGGHAA-IPQHTI-DPIVAASNVIVSLQHLV 257 (445)
Q Consensus 192 d~~i~~~~~~------~~p~g~~---~--~~~g~~~~G~~~~~i~~~G-~~~Has-~p~~g~-NAi~~~~~~i~~l~~~~ 257 (445)
++++..+... +.+.+.. . ......++|..+++|+++| +++||| .|+.++ ||+..++++|..++...
T Consensus 157 ~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~ 236 (477)
T TIGR01893 157 KILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKENL 236 (477)
T ss_pred cEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC
Confidence 4444432100 1121110 0 0001125799999999999 999998 588885 99999999999988752
Q ss_pred cccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHh--hC-------------
Q 013332 258 SREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASV--QR------------- 322 (445)
Q Consensus 258 ~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~--~~------------- 322 (445)
..+++.+.||.+.|+||++|++++|+|.......+.+.+++.+ .++..+.. .+
T Consensus 237 ----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (477)
T TIGR01893 237 ----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQS--KFKSEYSELEPNITIEVSKRENSVK 304 (477)
T ss_pred ----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHH--HHHHHhcccCCCeEEEEEECCCccc
Confidence 2678899999999999999999999997777777776666666 54433311 00
Q ss_pred ---------------------------------------------------------------------------CeEEE
Q 013332 323 ---------------------------------------------------------------------------CNATV 327 (445)
Q Consensus 323 ---------------------------------------------------------------------------~~~~i 327 (445)
..+++
T Consensus 305 ~~d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~v 384 (477)
T TIGR01893 305 VFSENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGARV 384 (477)
T ss_pred ccCHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeEE
Confidence 12233
Q ss_pred EecccCCCCcc--cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeE-EEEecCCCCCCCCCCCCCCCC
Q 013332 328 TFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGHSPY 404 (445)
Q Consensus 328 ~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~G~~~~~pG~~~~~H~~~ 404 (445)
+. ...+|++ +.|+++++.+.+++++.+|.++. ....+|++|+++|.+.+|.+ .+++|+ +. ..+|++|
T Consensus 385 ~~--~~~~~p~~~~~d~plv~~l~~a~~~~~g~~~~--~~~~~Ggtd~~~~~~~~~~i~~v~~Gp-----~~-~~~H~~n 454 (477)
T TIGR01893 385 EV--SAGYPSWQPDPQSNLLDTARKVYSEMFGEDPE--VKVIHAGLECGIISSKIPDIDMISIGP-----NI-YDPHSPN 454 (477)
T ss_pred EE--ecCCCcccCCCCCHHHHHHHHHHHHHHCCCCe--EEEeecCccHHHHHhhCCCceEEEeCC-----CC-CCCCCCC
Confidence 33 2345555 45688999999999999898763 34688999999998865543 455774 33 4599999
Q ss_pred CCCCCCchHHHHHHHHHHHHHH
Q 013332 405 FRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 405 E~v~i~~l~~~~~~~~~~i~~l 426 (445)
|++++++|.+++++|.+++..+
T Consensus 455 E~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 455 ERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred ceeeHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998654
No 57
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=1.3e-42 Score=354.28 Aligned_cols=345 Identities=16% Similarity=0.159 Sum_probs=258.6
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcC--C--CCcEEEEEEecccccCCCC---
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT--G--QPPFVALRADMDALAMEES--- 122 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~--~--~~p~i~l~~H~DtVp~~~~--- 122 (445)
+++++++++|++|||+|++|.++++||.++++++|++++++ ..+|+++++.+ + ..|+|+|.|||||||+++.
T Consensus 10 ~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d-~~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~ 88 (485)
T PRK15026 10 QPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERD-QVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTV 88 (485)
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEE-ecCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCcc
Confidence 67899999999999999999999999999999999998865 35799988743 2 2489999999999998653
Q ss_pred CCCc---cc-cCCCCccccCcc------hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCc
Q 013332 123 VEWE---HK-SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (445)
Q Consensus 123 ~~w~---~~-~~~~g~l~GrG~------kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~ 191 (445)
.+|. |. .++||++||||+ |++++++|.++ ++.+. .+++|.++|++||| |+.|++.+.. .. ...
T Consensus 89 ~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~~ 162 (485)
T PRK15026 89 HDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQA 162 (485)
T ss_pred ccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhh-cc-CCc
Confidence 2574 43 457899999996 57788776655 44443 47899999999999 6689999865 33 356
Q ss_pred ceeEEecccCCCCCCceeec-cC-------------cccccceEEEEEEEe-cCCCCC-CCCCCC-CHHHHHHHHHHHHH
Q 013332 192 EAIFGLHVSSLFPVGTVASR-PG-------------PTLAAGGFFEAVING-KGGHAA-IPQHTI-DPIVAASNVIVSLQ 254 (445)
Q Consensus 192 d~~i~~~~~~~~p~g~~~~~-~g-------------~~~~G~~~~~i~~~G-~~~Has-~p~~g~-NAi~~~~~~i~~l~ 254 (445)
+++|.+++. ..|.+... .| ...+|..+++|+++| +++||+ .|+.|+ |||..++++|.++.
T Consensus 163 ~~~i~~e~~---~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~ 239 (485)
T PRK15026 163 DILINTDSE---EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHA 239 (485)
T ss_pred CEEEEeCCC---CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhH
Confidence 888887642 22333211 01 012577899999999 999999 799999 99999999999854
Q ss_pred HhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhH-----------------------
Q 013332 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEW----------------------- 311 (445)
Q Consensus 255 ~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~----------------------- 311 (445)
. ..+++++.|+||++.|+||++|++.+++|....+..+.+.+.+.+.
T Consensus 240 ~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (485)
T PRK15026 240 E----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDK 309 (485)
T ss_pred h----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccc
Confidence 2 2678999999999999999999888888876544444433332210
Q ss_pred -------------------------------------------------------------------HHHHHHHHhhCCe
Q 013332 312 -------------------------------------------------------------------QVVMKQASVQRCN 324 (445)
Q Consensus 312 -------------------------------------------------------------------~~~~~~~~~~~~~ 324 (445)
..++..+...+.+
T Consensus 310 ~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~~ 389 (485)
T PRK15026 310 AALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAK 389 (485)
T ss_pred cccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCcE
Confidence 0111222333433
Q ss_pred EEEEecccCCCCcccC--CHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeE-EEEecCCCCCCCCCCCCC
Q 013332 325 ATVTFDDKSFYPVTVN--NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGH 401 (445)
Q Consensus 325 ~~i~~~~~~~~~~~~~--d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~G~~~~~pG~~~~~H 401 (445)
+++ ...+|+|.. |+++++.+.+++++++|.++. ....++++|++.|.+..|.+ +..|||.. ..+|
T Consensus 390 ~~~----~~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~~--~~~ihaglEcG~~~~~~p~i~~VsfGP~~------~~~H 457 (485)
T PRK15026 390 TEA----KGAYPGWQPDANSPVMHLVRETYQRLFNKTPN--IQIIHAGLECGLFKKPYPEMDMVSIGPTI------TGPH 457 (485)
T ss_pred EEE----eCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEEEehHHHHHhhCCCCCEEEECCCC------CCCC
Confidence 333 456777754 578999999999999998763 35788999999999764442 34578553 3489
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 402 SPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 402 ~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
+|||+++++++....+++..++.++
T Consensus 458 spdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 458 SPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred CCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 9999999999988877777777766
No 58
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=3.1e-41 Score=338.95 Aligned_cols=346 Identities=15% Similarity=0.130 Sum_probs=269.6
Q ss_pred HHHHHHHHHHHhC-CCC---------CcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC--CCcEEEEEEecccc
Q 013332 50 YWMVNIRRKIHEN-PEL---------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDAL 117 (445)
Q Consensus 50 ~~~~~ll~~l~~i-ps~---------s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~--~~p~i~l~~H~DtV 117 (445)
+.+++.+.+|-+| ..+ |.++.++++||++||+++|++++.+ ..+|+++++++. +.|+|++.+|||||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D-~~gN~~~~~~g~~~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFD-DVGNLYGRLVGTEFPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCeEEEeccccCC
Confidence 4566777777776 222 3457899999999999999998865 468999999764 24899999999999
Q ss_pred cCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC------CccHHHHHH-------
Q 013332 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLD------- 184 (445)
Q Consensus 118 p~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg------~~G~~~l~~------- 184 (445)
|.|.. .||. .|+++.|.+++.|++.+.+++++|.++++++||+ ..|++.+..
T Consensus 82 ~~gG~--------~dg~-------~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~ 146 (406)
T TIGR03176 82 VNGGN--------LDGQ-------FGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDV 146 (406)
T ss_pred CCCCc--------cCch-------hhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHH
Confidence 97531 1232 4889999999999999889999999999999996 357776651
Q ss_pred -----------------ccC--------CCCcceeEEecccCCC--C-CCceeeccCcccccceEEEEEEEecCCCCCCC
Q 013332 185 -----------------AGA--------LENVEAIFGLHVSSLF--P-VGTVASRPGPTLAAGGFFEAVINGKGGHAAIP 236 (445)
Q Consensus 185 -----------------~~~--------~~~~d~~i~~~~~~~~--p-~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p 236 (445)
.|+ ..++++.+.+|.+.+. . .|.. +....+++|..+++|+++|+++|+|.|
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~~-igiv~~~~G~~~~~v~v~GkaaHag~~ 225 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQS-IGVVNAIVGQRRYTVNLKGEANHAGTT 225 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCCe-EEEEeecccceEEEEEEEEECCCCCCC
Confidence 011 0134567778875431 1 1221 112246789999999999999999965
Q ss_pred CC--CCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEE-cCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHH
Q 013332 237 QH--TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE-GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQV 313 (445)
Q Consensus 237 ~~--g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~-gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~ 313 (445)
.. +.||+..+++++..+.++..+. ....++|++.|+ +|.+.|+||++|++++|+|+.+.++.+.+.++|++ .
T Consensus 226 p~~~r~dAi~aaa~~i~~l~~~~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~--~ 300 (406)
T TIGR03176 226 PMSYRRDTVYAFSRICTQSIERAKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELEN--D 300 (406)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHH--H
Confidence 43 4899999999999998874322 234689999999 57899999999999999999999999999999999 9
Q ss_pred HHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCC
Q 013332 314 VMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDET 393 (445)
Q Consensus 314 ~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~ 393 (445)
+++++..++++++++. ....++...|+++++.+.+++++. +..+ .....++++|+++|.+.+|++++ ||+
T Consensus 301 i~~ia~~~g~~~ei~~--~~~~~p~~~d~~lv~~l~~a~~~~-~~~~--~~~~sggg~Da~~~~~~vP~~~i-fgp---- 370 (406)
T TIGR03176 301 MKAIADEMDITIDIDL--WMDEAPVPMNKEIVAIIEQLAKAE-KLNY--RLMHSGAGHDAQIFAPRVPTAMI-FVP---- 370 (406)
T ss_pred HHHHHHHcCCeEEEEE--EecCCCCCCCHHHHHHHHHHHHHc-CCCc--eecCcccHHHHHHHHHHCCEEEE-EEe----
Confidence 9988888888887764 223344566789999999999987 4433 23467899999999998998664 452
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 394 KGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 394 pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
+....+|+|||++++++|..++++|..++.+++.
T Consensus 371 -~~~g~~H~p~E~v~~e~l~~g~~vl~~~l~~l~~ 404 (406)
T TIGR03176 371 -SIGGISHNPAERTNIEDLVEGVKTLADMLYELAY 404 (406)
T ss_pred -CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 2224689999999999999999999999998865
No 59
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=1.9e-41 Score=343.19 Aligned_cols=355 Identities=21% Similarity=0.229 Sum_probs=250.5
Q ss_pred HHHHHHHHHHhCCCCCcc------hHHHHHHHHHHHHhCCCCeeec--cCCceEEEEEcCCCCcEEEEEEecccccCCCC
Q 013332 51 WMVNIRRKIHENPELGFQ------EFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEES 122 (445)
Q Consensus 51 ~~~~ll~~l~~ips~s~~------E~~~a~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~ 122 (445)
++++++++|++|||+++. +.++++|+.++|+++||+++.. .++.|+++.++++ .++|+|+||+||||+++
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~- 79 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNP- 79 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCc-
Confidence 478999999999998753 5789999999999999998753 2457999998643 38899999999999875
Q ss_pred CCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccC--CCCcc
Q 013332 123 VEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA--LENVE 192 (445)
Q Consensus 123 ~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~--~~~~d 192 (445)
..|. |. .++||++||||+ ||+++++|+|++.|++. .++++|.|+|++||| ++.+..++++... ....|
T Consensus 80 ~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 157 (438)
T PRK08554 80 EEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPK 157 (438)
T ss_pred cccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCCEEEEEEcccccCccccHHHHHHHHhcCCCCC
Confidence 3575 43 467899999997 89999999999999874 467899999999999 5555556655321 12468
Q ss_pred eeEEecccCCCCCCceeeccCcc-----------cccc---eEEEEEEEecC-CCCCCCCCCCC--HHHHHHHHHHHHHH
Q 013332 193 AIFGLHVSSLFPVGTVASRPGPT-----------LAAG---GFFEAVINGKG-GHAAIPQHTID--PIVAASNVIVSLQH 255 (445)
Q Consensus 193 ~~i~~~~~~~~p~g~~~~~~g~~-----------~~G~---~~~~i~~~G~~-~Has~p~~g~N--Ai~~~~~~i~~l~~ 255 (445)
++|+.++....+ .+..+.|.. -.|. .++.+++.|.+ +|++.+..|.| |+..+++++.++..
T Consensus 158 ~~iv~Ept~~~~--~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~ 235 (438)
T PRK08554 158 YMINADGIGMKP--IIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNV 235 (438)
T ss_pred EEEEeCCCCCcc--hhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCc
Confidence 888754322111 101111100 0122 24444555554 99997766555 58888887776654
Q ss_pred hhcc-----cCC--CCCCeeEEEEEEEcCC-----------------------------------ccccc---cCcEEEE
Q 013332 256 LVSR-----EAD--PLDSQVLTVAKFEGGG-----------------------------------AFNII---PDSVTIG 290 (445)
Q Consensus 256 ~~~~-----~~~--~~~~~t~~i~~i~gG~-----------------------------------~~Nvi---P~~a~~~ 290 (445)
.... ... +....++++....+|. ..|++ |++|+++
T Consensus 236 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~ 315 (438)
T PRK08554 236 LAVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLK 315 (438)
T ss_pred eEEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEE
Confidence 3110 000 1122233333323443 56666 9999999
Q ss_pred EEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCcc
Q 013332 291 GTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGT 370 (445)
Q Consensus 291 ~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~ 370 (445)
+|+|+.+ .+.+++.++|++ +++.. ..+++++++.....+.+..+.++++++.+++++++. |.++ .+...+|+
T Consensus 316 ~DiR~~~-~~~e~v~~~i~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~-g~~~--~~~~~~Gg 387 (438)
T PRK08554 316 LDIRAMS-YSKEDIERTLKE--VLEFN--LPEAEVEIRTNEKAGYLFTPPDEEIVKVALRVLKEL-GEDA--EPVEGPGA 387 (438)
T ss_pred EEEEecC-CCHHHHHHHHHH--Hhhcc--CCCceEEEEeccCCCCcCCCCChHHHHHHHHHHHHh-CCCc--EEEecCCc
Confidence 9999988 688999999999 77543 134555655421233334456789999999999885 8765 34578899
Q ss_pred chHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 371 EDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 371 tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
||+++++.. +|++. ||+. . ..+|++|||+++++|.+++++|.+++.+|+
T Consensus 388 tDa~~~~~~Gip~v~--~Gp~-----~-~~~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 388 SDSRYFTPYGVKAID--FGPK-----G-GNIHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred hHHHHHHhcCCCceE--ECCC-----C-CCCCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 999999877 99876 4632 2 469999999999999999999999998876
No 60
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=2.8e-40 Score=345.38 Aligned_cols=348 Identities=14% Similarity=0.139 Sum_probs=274.7
Q ss_pred hhHHHHHHHHHHHHhCCCC-------------CcchHHHHHHHHHHHHhCCC-CeeeccCCceEEEEEcCC-C-CcEEEE
Q 013332 47 EIFYWMVNIRRKIHENPEL-------------GFQEFETSKLIRAELDQMGI-PYKFPVAVTGVVGYIGTG-Q-PPFVAL 110 (445)
Q Consensus 47 ~~~~~~~~ll~~l~~ips~-------------s~~E~~~a~~l~~~l~~~G~-~~~~~~~~~nvia~~~~~-~-~p~i~l 110 (445)
.+.+++++.+..|.+|+.+ |..+.++++||.+||+++|+ +++++ ..+|+++++++. + .|+|++
T Consensus 178 ~~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D-~~GNl~~~~~g~~~~~~~v~~ 256 (591)
T PRK13590 178 VLGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHID-AVGNVVGRYKGSTPQAKRLLT 256 (591)
T ss_pred hHHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeEC-CCCCEEEEecCCCCCCCeEEE
Confidence 3446777888888888653 33467899999999999999 88765 469999999653 3 489999
Q ss_pred EEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC------CccHHH---
Q 013332 111 RADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKK--- 181 (445)
Q Consensus 111 ~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg------~~G~~~--- 181 (445)
.+||||||.+ |+++|+ +|++++|.+++.|++.+..++++|.|++++|||+ ..|++.
T Consensus 257 gsHlDTV~~g------------G~~DG~---~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G 321 (591)
T PRK13590 257 GSHYDTVRNG------------GKYDGR---LGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIG 321 (591)
T ss_pred ecccccCCCC------------CCcccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhC
Confidence 9999999853 666676 6999999999999999988889999999999996 356764
Q ss_pred -----HHH---------------ccC-----------CCCcceeEEecccCCCC---CC-ceeeccCcccccceEEEEEE
Q 013332 182 -----MLD---------------AGA-----------LENVEAIFGLHVSSLFP---VG-TVASRPGPTLAAGGFFEAVI 226 (445)
Q Consensus 182 -----l~~---------------~~~-----------~~~~d~~i~~~~~~~~p---~g-~~~~~~g~~~~G~~~~~i~~ 226 (445)
+++ .|+ ...+.+.+.+|.+++.- .| .+. ...+++|..+++|++
T Consensus 322 ~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~g--vV~~~~G~~~~~v~v 399 (591)
T PRK13590 322 DFDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLG--IVTSINGSVRYVGEM 399 (591)
T ss_pred CChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceE--EEeeeeccEEEEEEE
Confidence 222 111 01344667777665410 11 111 124578999999999
Q ss_pred EecCCCCCC-CCC-CCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEc-CCccccccCcEEEEEEEecCChhhHHH
Q 013332 227 NGKGGHAAI-PQH-TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEG-GGAFNIIPDSVTIGGTFRAFSKESIIQ 303 (445)
Q Consensus 227 ~G~~~Has~-p~~-g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~g-G~~~NviP~~a~~~~diR~~~~~~~~~ 303 (445)
+|+++|+|. |+. +.||+..+++++..++++... ....+.+++.|++ |.+.|+||++|++++|+|+.+.++.+.
T Consensus 400 ~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~ 475 (591)
T PRK13590 400 IGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDA 475 (591)
T ss_pred EeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHH
Confidence 999999995 654 689999999999999886422 1234779999883 668999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeE
Q 013332 304 LKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY 383 (445)
Q Consensus 304 v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~ 383 (445)
+.++|++ .+++++..++++++++. ....++..+|+++++.+.+++++. |.++. ....+|++|+++|...+|..
T Consensus 476 v~~~i~~--~i~~ia~~~g~~vei~~--~~~~~~~~~d~~lv~~~~~aa~~~-G~~~~--~~~sggg~Da~~~a~~~p~~ 548 (591)
T PRK13590 476 MVADVLA--ELEAICERRGLRYTLEE--TMRAAAAPSAPAWQQRWEAAVAAL-GLPLF--RMPSGAGHDAMKLHEIMPQA 548 (591)
T ss_pred HHHHHHH--HHHHHHHHcCCeEEEEE--eecCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCcchhHHHHHHHHHCCEE
Confidence 9999999 99998888888888876 456677788999999999999885 87653 35678999999999988855
Q ss_pred EEEecCCCCCCCC-CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 384 FYYLGMNDETKGK-FETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 384 ~~~~G~~~~~pG~-~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
++ || ||. .+.+|+++||+++++|..++++|.+++..+...
T Consensus 549 mi-fg-----pg~~~g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~~ 589 (591)
T PRK13590 549 ML-FV-----RGENAGISHNPLESSTADDMQLAVQAFQHLLDQLAAE 589 (591)
T ss_pred EE-EE-----eeCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 43 44 332 246899999999999999999999999888643
No 61
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=345.77 Aligned_cols=351 Identities=15% Similarity=0.150 Sum_probs=277.5
Q ss_pred hhHHHHHHHHHHHHhCCCC-------------CcchHHHHHHHHHHHHhCCCC-eeeccCCceEEEEEcCC--CCcEEEE
Q 013332 47 EIFYWMVNIRRKIHENPEL-------------GFQEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG--QPPFVAL 110 (445)
Q Consensus 47 ~~~~~~~~ll~~l~~ips~-------------s~~E~~~a~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~--~~p~i~l 110 (445)
.+.+.+++.+..|.+|+.+ |.++.++++|+.+||+++|++ ++++. .+||++++++. +.|+|++
T Consensus 178 ~~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~-~gNv~~~~~g~~~~~p~v~~ 256 (591)
T PRK13799 178 AIGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDA-VGNVVGRYKAADDDAKTLIT 256 (591)
T ss_pred hHHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECC-CCCEEEEcCCCCCCCCeEEE
Confidence 4556788888899998631 234678999999999999998 98654 69999999653 3689999
Q ss_pred EEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCC------ccHHHHH-
Q 013332 111 RADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKML- 183 (445)
Q Consensus 111 ~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~l~- 183 (445)
.+|+||||. +|+++|+ .|++++|.+++.|++.+.+++++|.|++.++|||. .|++.+.
T Consensus 257 gSHlDTV~~------------gG~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G 321 (591)
T PRK13799 257 GSHYDTVRN------------GGKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIG 321 (591)
T ss_pred eccccccCC------------CCccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhC
Confidence 999999985 4888888 69999999999999999999999999999999962 5666664
Q ss_pred -------H----ccC---------------C-------CCcceeEEecccCCC---CCCceeeccCcccccceEEEEEEE
Q 013332 184 -------D----AGA---------------L-------ENVEAIFGLHVSSLF---PVGTVASRPGPTLAAGGFFEAVIN 227 (445)
Q Consensus 184 -------~----~~~---------------~-------~~~d~~i~~~~~~~~---p~g~~~~~~g~~~~G~~~~~i~~~ 227 (445)
+ +|. . .++++.+.+|.+++. ..|. .+.+..+++|..+++|+++
T Consensus 322 ~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~-~igvV~g~~G~~~~~Itv~ 400 (591)
T PRK13799 322 DFNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDI-PLGIVTSIAGSARYICEFI 400 (591)
T ss_pred CChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCC-cEEEEeeeccceEEEEEEE
Confidence 1 121 0 134566777766541 1111 1112245789999999999
Q ss_pred ecCCCCCC-CC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHHH
Q 013332 228 GKGGHAAI-PQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQL 304 (445)
Q Consensus 228 G~~~Has~-p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~v 304 (445)
|+++|+|. |+ .+.||+..+++++..++++..+. +....+++++.|+++ .+.|+||++|++++|+|+.+.++.+.+
T Consensus 401 GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l 478 (591)
T PRK13799 401 GMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAA 478 (591)
T ss_pred EECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHH
Confidence 99999995 64 58899999999999999875432 223357899999853 489999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEE
Q 013332 305 KQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYF 384 (445)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~ 384 (445)
.+++++ .++..+...++++++++ ....++..+|+++++.+.+++++. |.++. ...+++++|+++|.+..|..+
T Consensus 479 ~~~i~~--~i~~ia~~~g~~~ei~~--~~~~~~~~~d~~lv~~~~~a~~~~-G~~~~--~~~sgag~Da~~~a~~~p~am 551 (591)
T PRK13799 479 VADILA--EIAAIAARRGIEYKAEL--AMKAAAAPCAPELMKQLEAATDAA-GVPLF--ELASGAGHDAMKIAEIMDQAM 551 (591)
T ss_pred HHHHHH--HHHHHHHHhCCeEEEEE--EecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCcchHHHHHHHHhhCCEEE
Confidence 999999 99888888888887776 455677788899999999988875 87653 246789999999999877655
Q ss_pred EEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 385 YYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 385 ~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
++.++. ..+.+|+|+||+++++|..++++|.+++.++.+
T Consensus 552 if~~~g-----~~g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 552 LFTRCG-----NAGISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred EEEecC-----CCCCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 533322 224589999999999999999999999988764
No 62
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=315.05 Aligned_cols=360 Identities=16% Similarity=0.174 Sum_probs=277.5
Q ss_pred HHHHHHHHHHHhCCCCCcc--hH-HHHHHHHHHHHhCCCCeee---ccCCceEEEEEcCCC--CcEEEEEEecccccCCC
Q 013332 50 YWMVNIRRKIHENPELGFQ--EF-ETSKLIRAELDQMGIPYKF---PVAVTGVVGYIGTGQ--PPFVALRADMDALAMEE 121 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~--E~-~~a~~l~~~l~~~G~~~~~---~~~~~nvia~~~~~~--~p~i~l~~H~DtVp~~~ 121 (445)
...+..+++.++||++-.+ -. .+++|+..+.+.+|..++. .++.++++.+|.|++ -|.|+|++|+||||+-.
T Consensus 25 ~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~ 104 (420)
T KOG2275|consen 25 NISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFR 104 (420)
T ss_pred chHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCc
Confidence 5578889999999998533 34 7899999999999998765 456788999996653 48999999999999876
Q ss_pred CCCCccc-----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-C-CccHHHHHHccCCCCc
Q 013332 122 SVEWEHK-----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGALENV 191 (445)
Q Consensus 122 ~~~w~~~-----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g-~~G~~~l~~~~~~~~~ 191 (445)
+ .|.++ ..+||.|||||+ |...++.|.|++.|+..|.+++++|.+.|++||| + ..|++.+.+...+++.
T Consensus 105 e-~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l 183 (420)
T KOG2275|consen 105 E-KWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKL 183 (420)
T ss_pred c-cCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhccc
Confidence 5 89765 257899999998 8999999999999999999999999999999999 4 4899999874444443
Q ss_pred ceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc---------CC
Q 013332 192 EAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE---------AD 262 (445)
Q Consensus 192 d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~---------~~ 262 (445)
...+.++- +.++-.-..+++.++||.+|++|+++|++||||.|.. ..|+.++.++|.+++++.... ..
T Consensus 184 ~~~filDE--G~~se~d~~~vfyaEkg~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~ 260 (420)
T KOG2275|consen 184 NLGFILDE--GGATENDFATVFYAEKGPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLA 260 (420)
T ss_pred ceeEEecC--CCCCcccceeEEEEeeceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCcee
Confidence 34444332 2223222245567899999999999999999997432 357888888888887764211 11
Q ss_pred CCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHH-HhHHHHHHHHHhhCCeEEEEeccc--CCCCcc-
Q 013332 263 PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRI-EEWQVVMKQASVQRCNATVTFDDK--SFYPVT- 338 (445)
Q Consensus 263 ~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i-~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~- 338 (445)
....+|+|++.|+||.+.|++|...++.+|+|+.+..+..++.+++ ++ .++ +++-.+++++... ..+++.
T Consensus 261 ~~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~--w~~----~~~eg~t~~f~~~~~~~~~~~t 334 (420)
T KOG2275|consen 261 LGDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDE--WAE----EAGEGVTLEFSQKVILDYPPVT 334 (420)
T ss_pred ccceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHH--hhh----hcCCceEEeccCcccCCCCCCC
Confidence 2467899999999999999999999999999999999999999998 66 433 3444455554321 133333
Q ss_pred --cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013332 339 --VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 415 (445)
Q Consensus 339 --~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~ 415 (445)
..+.+++..+..++++. |.... +...+|+||.+++... +|..-|. +..+ ..-..|..||++..+.+.++
T Consensus 335 ~~~~s~p~w~~~~~a~~~~-~~k~~--~~i~~gstdsr~~rn~gvp~~~fs-p~~n----t~~~~H~hnE~l~~~~~l~g 406 (420)
T KOG2275|consen 335 PTDDSNPFWTAFAGALKDE-GGKGY--PEIGPGSTDSRHIRNEGVPAIGFS-PIIN----TPMLLHDHNEFLNEKVFLRG 406 (420)
T ss_pred CCCCCChHHHHHHHHHHHh-cCccc--eeecccccccchhhhcCcchhccc-cccc----ccceecchhhhhCchhhhhh
Confidence 33467999999999998 55442 4578999999999988 8875543 2222 23679999999999999999
Q ss_pred HHHHHHHHHHHH
Q 013332 416 AALHASLATRYL 427 (445)
Q Consensus 416 ~~~~~~~i~~l~ 427 (445)
+++|..++..+.
T Consensus 407 i~~~~~~i~~~~ 418 (420)
T KOG2275|consen 407 IEIYYTIIVNLA 418 (420)
T ss_pred hhHHHHHHHhhc
Confidence 999999877654
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-34 Score=270.82 Aligned_cols=375 Identities=17% Similarity=0.193 Sum_probs=281.5
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCcch------HHHHHHHHHHHHhCCCCeeecc-------------CCceE
Q 013332 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------FETSKLIRAELDQMGIPYKFPV-------------AVTGV 96 (445)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E------~~~a~~l~~~l~~~G~~~~~~~-------------~~~nv 96 (445)
..++.++|+.++ +++++.|++.++|+|+|... +++++|++++|+++|-+++..+ ..+-+
T Consensus 4 l~~~fq~id~~~--de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvv 81 (473)
T KOG2276|consen 4 LTKVFQSIDLNK--DEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVV 81 (473)
T ss_pred HHHHHHHhhccH--HHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhh
Confidence 458999999999 99999999999999998643 5899999999999997776521 12346
Q ss_pred EEEEcCCC-CcEEEEEEecccccCCCCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEE
Q 013332 97 VGYIGTGQ-PPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLV 168 (445)
Q Consensus 97 ia~~~~~~-~p~i~l~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i 168 (445)
.+++|..+ +++++++|||||+|++.+++|.++ +++||+|||||+ ||++++.+.+++++++.+..++-||+|+
T Consensus 82 l~~~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~ 161 (473)
T KOG2276|consen 82 LGVLGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFV 161 (473)
T ss_pred hhcccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEE
Confidence 67777664 589999999999999988999654 678999999998 7999999999999999999999999999
Q ss_pred EeecCC-CCccHHHHHHc---cCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEe--cCCCCCC-CCCCCC
Q 013332 169 FQPAEE-GGGGAKKMLDA---GALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVING--KGGHAAI-PQHTID 241 (445)
Q Consensus 169 ~~~dEE-g~~G~~~l~~~---~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G--~~~Has~-p~~g~N 241 (445)
|..-|| |+.|...++++ .++.++|++...+.-. .-+...+. ..+.+|...+.|+|.| +..|||. ...-.-
T Consensus 162 ~EgmEEsgS~~L~~l~~~~kD~~~~~vD~vciSdnyW-lg~kkPcl--tyGlRG~~yf~i~v~g~~~DlHSGvfGG~~hE 238 (473)
T KOG2276|consen 162 FEGMEESGSEGLDELIEKEKDKFFKDVDFVCISDNYW-LGTKKPCL--TYGLRGVIYFQIEVEGPSKDLHSGVFGGVVHE 238 (473)
T ss_pred EEechhccCccHHHHHHHHhhhhhccCCEEEeeCcee-ccCCCccc--ccccccceeEEEEEeecccccccccccchhHH
Confidence 999999 77788887764 3456788876543210 00111111 1245799999999999 7899994 322335
Q ss_pred HHHHHHHHHHHHHHhhccc----------------------CC---------------CC-----------CCeeEEEEE
Q 013332 242 PIVAASNVIVSLQHLVSRE----------------------AD---------------PL-----------DSQVLTVAK 273 (445)
Q Consensus 242 Ai~~~~~~i~~l~~~~~~~----------------------~~---------------~~-----------~~~t~~i~~ 273 (445)
|+..+..++..|.+...+. .+ +. ..+++++..
T Consensus 239 ~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihg 318 (473)
T KOG2276|consen 239 AMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHG 318 (473)
T ss_pred HHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceec
Confidence 6666666666665432110 00 00 134667766
Q ss_pred EEc----CCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCe--EEEEecccCCCCcc--cCCHHHH
Q 013332 274 FEG----GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCN--ATVTFDDKSFYPVT--VNNKNLH 345 (445)
Q Consensus 274 i~g----G~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~--~~d~~l~ 345 (445)
|.| ..+..|||.++.-.|.+|+.|.++.+.+.+.+.+ .++....+.+.. .++.. .....+| +.+++-+
T Consensus 319 IeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~--yl~~~f~~~nS~N~l~~~~--~~~~~~Wv~d~~~~~y 394 (473)
T KOG2276|consen 319 IEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTR--YLEKVFAELNSPNKLKVSM--GHAGAPWVSDPDDPHY 394 (473)
T ss_pred ccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHH--HHHHHHHhcCCCCceEEee--cCCCCceecCCCchhH
Confidence 664 4678899999999999999999999999999999 998876655544 34444 3344444 4456789
Q ss_pred HHHHHHHHHhcCCcccccCCCCCccchHHH-HHhh--cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 013332 346 EHFQKVAADMLGVQNIKENRPLMGTEDFSF-FAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASL 422 (445)
Q Consensus 346 ~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~-~~~~--ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~ 422 (445)
.++++|+++++|.+| ....-+|+-.... |.+. .+.+...+|... .++|+.||++.+..+..+.+++++.
T Consensus 395 ~a~krA~~~v~gveP--d~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~d------D~aHsqNEkl~i~N~~~G~k~l~ay 466 (473)
T KOG2276|consen 395 LALKRAIETVYGVEP--DFTREGGSIPVTLTFQDITGKSVLLLPYGASD------DGAHSQNEKLNITNYVEGTKVLAAY 466 (473)
T ss_pred HHHHHHHHHhhCCCC--CccccCCccceehHHHHHhCCCeEEecccccc------cchhhhcccccHHHHhhhHHHHHHH
Confidence 999999999999987 3344454544433 4444 566666667544 5699999999999999999999999
Q ss_pred HHHHH
Q 013332 423 ATRYL 427 (445)
Q Consensus 423 i~~l~ 427 (445)
+.++.
T Consensus 467 ~~el~ 471 (473)
T KOG2276|consen 467 ISELA 471 (473)
T ss_pred HHHHh
Confidence 98875
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.94 E-value=3.1e-26 Score=224.90 Aligned_cols=350 Identities=17% Similarity=0.164 Sum_probs=268.3
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCe-eec-------cCC--ce-EEEEEcCCC--CcEEEEEEeccc
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPY-KFP-------VAV--TG-VVGYIGTGQ--PPFVALRADMDA 116 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~-~~~-------~~~--~n-via~~~~~~--~p~i~l~~H~Dt 116 (445)
+.+++.+.++++||+.|.+|++++.++.+|++.+|+.+ ... ... .| +.+.+.+.- =|++.|.+|+||
T Consensus 5 ~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt 84 (414)
T COG2195 5 ERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDT 84 (414)
T ss_pred HHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeeccccccccccccccccc
Confidence 67999999999999999999999999999999999998 321 111 22 445565532 388999999999
Q ss_pred ccCCC----CCCC----------------------ccccC----------CCC-ccccCcchHHHHHHHHHHHHHHhcc-
Q 013332 117 LAMEE----SVEW----------------------EHKSK----------VPG-KMHACGHDAHVAMLLGAAKMLQVFR- 158 (445)
Q Consensus 117 Vp~~~----~~~w----------------------~~~~~----------~~g-~l~GrG~kg~~aa~l~a~~~l~~~~- 158 (445)
+|-.- ..+| .++.. .|| -|-|-.+|+|++.++.++..+++..
T Consensus 85 ~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~~ 164 (414)
T COG2195 85 VPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKHP 164 (414)
T ss_pred cccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcCc
Confidence 96210 0112 11100 122 1233334799999999999999652
Q ss_pred ccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-CC
Q 013332 159 HEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IP 236 (445)
Q Consensus 159 ~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p 236 (445)
..+.++|++.|+++|| ++.|+..+.-... .+++.+.++ +.+.|.+.... .+...+++++.|+.+|++ .+
T Consensus 165 ~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~f--~a~~ay~iD---Gg~~g~i~~ea----~~~~~~~~~~~g~~~h~~~a~ 235 (414)
T COG2195 165 EIPHGGIRGGFSPDEEIGGRGAANKDVARF--LADFAYTLD---GGPVGEIPREA----FNAAAVRATIVGPNVHPGSAK 235 (414)
T ss_pred cccccCeEEEecchHHhhhhhhhhccHHhh--hcceeEecC---CCccCeeeeec----cchheeeeeeeccCcCccchH
Confidence 3577999999999999 6689887754422 355666554 45667765442 366789999999999999 57
Q ss_pred CCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHH
Q 013332 237 QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMK 316 (445)
Q Consensus 237 ~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~ 316 (445)
....||+..+.+++..+.... ....++.+.+..+++...|.|.+++.....+|.......+.....+++ .+++
T Consensus 236 ~~~i~a~~~a~e~~~~~~~~~-----~~e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~--~~~~ 308 (414)
T COG2195 236 GKMINALLLAAEFILELPLEE-----VPELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKD--VVEE 308 (414)
T ss_pred HHHhhHHHhhhhhhhcCCccc-----ccccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHH--HHHH
Confidence 778899998888888765431 123567788999999999999999999999999999888888888888 8888
Q ss_pred HHHhhC--CeEEEEecccCCCCccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCC
Q 013332 317 QASVQR--CNATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMND 391 (445)
Q Consensus 317 ~~~~~~--~~~~i~~~~~~~~~~~~--~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~ 391 (445)
.+..++ ..++++. ...||.+. .++.++..++++++++ +.++. ....+||+|++.++.. .|+..++.|| .
T Consensus 309 ~~~~~g~~~~~~~~~--~~~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p~--v~~i~gGtd~~~is~~g~p~~~i~~Gp-~ 382 (414)
T COG2195 309 MAASLGKLAGAELEV--KDSYPGWKIKPDSPLVDLAKKAYKEL-GIKPK--VKPIHGGTDGGVLSFKGLPTPNISTGP-G 382 (414)
T ss_pred HHHHhhhccceEEEE--eccccCcCCCCCchHHHHHHHHHHHh-CCCce--EEEeecccchhhhhccCCCCceEeccc-c
Confidence 877777 6677776 67888774 4577999999999999 55553 3579999999999988 8988888894 2
Q ss_pred CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 392 ETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 392 ~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
...|+++|+|+++++.++.+++..++..+.
T Consensus 383 ------~n~Hs~~E~v~I~s~ek~~~~l~~l~~~~~ 412 (414)
T COG2195 383 ------ENPHSPDEFVSIESMEKAVQVLVELLKLAA 412 (414)
T ss_pred ------cCCCCccceeehHHHHHHHHHHHHHHHHhh
Confidence 569999999999999999999988877653
No 65
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.87 E-value=8.1e-22 Score=177.70 Aligned_cols=175 Identities=29% Similarity=0.382 Sum_probs=131.7
Q ss_pred EEEEecccccCCCCCCCccc----cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCc-cH
Q 013332 109 ALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG-GA 179 (445)
Q Consensus 109 ~l~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~-G~ 179 (445)
+|++|||||| + ..+|.++ .+++|++||||+ |+++++++.+++.|++.+.+++++|.|+|+++|| ++. |+
T Consensus 1 ll~~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 6899999999 4 6689654 578999999998 7999999999999998888999999999999999 555 99
Q ss_pred HHHHHccC--CCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 013332 180 KKMLDAGA--LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLV 257 (445)
Q Consensus 180 ~~l~~~~~--~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~ 257 (445)
+++++++. ...+|+++.. +|+.. +...
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~-----e~~~~----------~~~~------------------------------------ 107 (189)
T PF01546_consen 79 KHLLEEGAFFGLHPDYVIIG-----EPTGK----------GGVG------------------------------------ 107 (189)
T ss_dssp HHHHHHCEEEEEEESEEEEC-----ECETT----------SEEE------------------------------------
T ss_pred hhhhhhcccccccccccccc-----ccccc----------cccc------------------------------------
Confidence 99999742 1124444432 22221 1100
Q ss_pred cccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCc
Q 013332 258 SREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPV 337 (445)
Q Consensus 258 ~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 337 (445)
T Consensus 108 -------------------------------------------------------------------------------- 107 (189)
T PF01546_consen 108 -------------------------------------------------------------------------------- 107 (189)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHh--hcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013332 338 TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE--AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 415 (445)
Q Consensus 338 ~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~--~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~ 415 (445)
...++++++.+.+++++.++... .....++++|++++.. ..+..+.++| ||. ..+|++||++.++++.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tD~~~~~~~~~~~~~~i~~G-----~~~-~~~H~~~E~i~~~~l~~~ 179 (189)
T PF01546_consen 108 SDNDPPLVQALQAAAQEVGGEPP--EPVASGGGTDAGFLAEVKGLGIPAIGFG-----PGG-SNAHTPDEYIDIEDLVKG 179 (189)
T ss_dssp HCTCHHHHHHHHHHHHHTTSSEE--EEEEESSSSTHHHHHCHHHTTEEEEEEE-----SCE-ESTTSTT-EEEHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhhccc--cccceeccccchhhhhhhccccceeeeC-----CCC-CCCCCCCcEecHHHHHHH
Confidence 24567799999999999855233 2357899999999995 3222334466 444 679999999999999999
Q ss_pred HHHHHHHHH
Q 013332 416 AALHASLAT 424 (445)
Q Consensus 416 ~~~~~~~i~ 424 (445)
+++|++++.
T Consensus 180 ~~~~~~~l~ 188 (189)
T PF01546_consen 180 AKIYAALLE 188 (189)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
No 66
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.74 E-value=1.5e-17 Score=136.45 Aligned_cols=104 Identities=30% Similarity=0.369 Sum_probs=94.5
Q ss_pred ccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-----CCCCCeeEEEEEEEcCCccccccCcEEE
Q 013332 215 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-----DPLDSQVLTVAKFEGGGAFNIIPDSVTI 289 (445)
Q Consensus 215 ~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~-----~~~~~~t~~i~~i~gG~~~NviP~~a~~ 289 (445)
+++|..+++|+++|+++|+|.|+.|.||+..+++++..|+.+..+.. ......+++++.++||...|+||++|++
T Consensus 2 g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~ 81 (111)
T PF07687_consen 2 GHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATL 81 (111)
T ss_dssp EEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEE
T ss_pred cCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEE
Confidence 46799999999999999999999999999999999999998854432 3567899999999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHhHHHHHHHHHh
Q 013332 290 GGTFRAFSKESIIQLKQRIEEWQVVMKQASV 320 (445)
Q Consensus 290 ~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~ 320 (445)
++++|++|.++.+++.+.|++ .+++.+.+
T Consensus 82 ~~~~R~~p~~~~~~i~~~i~~--~~~~~~~~ 110 (111)
T PF07687_consen 82 TVDIRYPPGEDLEEIKAEIEA--AVEKIAKK 110 (111)
T ss_dssp EEEEEESTCHHHHHHHHHHHH--HHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHH--HHHHhhhC
Confidence 999999999999999999999 99876543
No 67
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.73 E-value=1.5e-16 Score=152.07 Aligned_cols=253 Identities=14% Similarity=0.130 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCCeee----------cc--CCceEEEEEcCC-CCcEEEEEEec
Q 013332 50 YWMVNIRRKIHENPELGF--QEFETSKLIRAELDQMGIPYKF----------PV--AVTGVVGYIGTG-QPPFVALRADM 114 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~--~E~~~a~~l~~~l~~~G~~~~~----------~~--~~~nvia~~~~~-~~p~i~l~~H~ 114 (445)
+++.++...|++.||+.+ .|...+++|...|+++-+=-+- ++ ++.||+|-++++ ...+|++.||+
T Consensus 8 e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH~ 87 (553)
T COG4187 8 ERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGHF 87 (553)
T ss_pred HHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeecc
Confidence 789999999999999986 4778899999999887542110 12 688999999664 45899999999
Q ss_pred ccccCCCCCCC---ccc----------------------cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEE
Q 013332 115 DALAMEESVEW---EHK----------------------SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIV 166 (445)
Q Consensus 115 DtVp~~~~~~w---~~~----------------------~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~ 166 (445)
|||.+.+-... .|+ -..+++|+|||+ |+|+|+.|++++.+.+. ...+|||.
T Consensus 88 DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNlL 166 (553)
T COG4187 88 DTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNLL 166 (553)
T ss_pred ceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcEE
Confidence 99987653222 121 123679999997 89999999999999887 47899999
Q ss_pred EEEeecCC-CCccHHHHHHc--cCC--CCcceeEEecccCCCCC-----CceeeccCcccccceEEEEEEEecCCCCCCC
Q 013332 167 LVFQPAEE-GGGGAKKMLDA--GAL--ENVEAIFGLHVSSLFPV-----GTVASRPGPTLAAGGFFEAVINGKGGHAAIP 236 (445)
Q Consensus 167 ~i~~~dEE-g~~G~~~l~~~--~~~--~~~d~~i~~~~~~~~p~-----g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p 236 (445)
|+.++||| ...|++..+.. +.. .+++...++..+...|. ++..+ .+..|.+-.-.-|.|+..|.|.|
T Consensus 167 f~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvY---tGtiGKLLp~f~vvG~etHvG~~ 243 (553)
T COG4187 167 FMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVY---TGTIGKLLPFFFVVGCETHVGYP 243 (553)
T ss_pred EEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEE---eccchhhcceeEEEeeccccCCc
Confidence 99999999 67888876642 111 13343333332222221 22222 23346666677899999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhh---cccCCCCCCeeEEEEEEEc---CCcccc-ccCcEEEEEEEecCChhhHHHHHHHHH
Q 013332 237 QHTIDPIVAASNVIVSLQHLV---SREADPLDSQVLTVAKFEG---GGAFNI-IPDSVTIGGTFRAFSKESIIQLKQRIE 309 (445)
Q Consensus 237 ~~g~NAi~~~~~~i~~l~~~~---~~~~~~~~~~t~~i~~i~g---G~~~Nv-iP~~a~~~~diR~~~~~~~~~v~~~i~ 309 (445)
..|+||-..++.++.+|+.-. .+... ..+.-++.+.- =.+.|| .|.++++.|++=+. ..+..++.+.++
T Consensus 244 f~Gvnan~maSei~~~le~N~~l~dr~~G---e~t~PPs~L~qkDlKe~Y~VqTp~~a~~~fN~l~h-~~ta~~~~d~l~ 319 (553)
T COG4187 244 FEGVNANFMASEITRRLELNADLADRVDG---EITPPPSCLEQKDLKESYNVQTPERAWLYFNWLYH-SRTAKELFDRLK 319 (553)
T ss_pred ccCCCHHHHHHHHHHHhhcChhhhhhhCC---eeCCCcHhhhhhhhhhhccccCcchhhhhheehhh-cCCHHHHHHHHH
Confidence 999999999999999987432 11111 01111111111 123555 58889999888543 344444444444
Q ss_pred h
Q 013332 310 E 310 (445)
Q Consensus 310 ~ 310 (445)
+
T Consensus 320 ~ 320 (553)
T COG4187 320 E 320 (553)
T ss_pred H
Confidence 4
No 68
>PRK09961 exoaminopeptidase; Provisional
Probab=99.68 E-value=2.8e-15 Score=146.76 Aligned_cols=249 Identities=15% Similarity=0.146 Sum_probs=169.1
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccC-----CCC-----
Q 013332 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM-----EES----- 122 (445)
Q Consensus 53 ~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~-----~~~----- 122 (445)
+++|++|+++||+|++|.++++++.++|+++|++++.+ ..+|+++++++.++|+|+|.+|||+|+. .+.
T Consensus 3 ~~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~D-~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~ 81 (344)
T PRK09961 3 LSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDV 81 (344)
T ss_pred HHHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEE
Confidence 46799999999999999999999999999999998764 6899999886544589999999999973 110
Q ss_pred ---CCCc-------------------------------cc---------c-----------------------CCCCccc
Q 013332 123 ---VEWE-------------------------------HK---------S-----------------------KVPGKMH 136 (445)
Q Consensus 123 ---~~w~-------------------------------~~---------~-----------------------~~~g~l~ 136 (445)
.+|. +. + ..++++.
T Consensus 82 ~~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~ 161 (344)
T PRK09961 82 LPVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVM 161 (344)
T ss_pred EeCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEE
Confidence 0111 00 0 0123344
Q ss_pred cCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccC
Q 013332 137 ACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPG 213 (445)
Q Consensus 137 GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g 213 (445)
|+.- +.++++++.+++.+++. +++.+++++|++.|| |..|++..... + ++|.+|+.+...
T Consensus 162 gkalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~--i-~pd~~I~vDv~~------------ 224 (344)
T PRK09961 162 GKAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTAC------------ 224 (344)
T ss_pred EeechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc--c-CCCEEEEEeccC------------
Confidence 5444 48999999999998754 578999999999999 77898877542 2 457777643210
Q ss_pred cccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEE
Q 013332 214 PTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTF 293 (445)
Q Consensus 214 ~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~di 293 (445)
|.-.|... + . +...+.+
T Consensus 225 ------------------~~d~~~~~-----------------------~-~----~~~~lg~----------------- 241 (344)
T PRK09961 225 ------------------WAKNFDYG-----------------------A-A----NHRQIGN----------------- 241 (344)
T ss_pred ------------------CCCCCCCC-----------------------C-C----cccccCC-----------------
Confidence 00011100 0 0 0000111
Q ss_pred ecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchH
Q 013332 294 RAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDF 373 (445)
Q Consensus 294 R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~ 373 (445)
|.- +.. ... ....|+.+.+.+++++++. +.+.... ...+|+||+
T Consensus 242 ----------------------------Gp~--i~~--~D~--~~i~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~ggGTDa 285 (344)
T PRK09961 242 ----------------------------GPM--LVL--SDK--SLIAPPKLTAWIETVAAEI-GIPLQAD-MFSNGGTDG 285 (344)
T ss_pred ----------------------------Cce--EEE--ccC--CcCCCHHHHHHHHHHHHHc-CCCcEEE-ecCCCcchH
Confidence 111 111 111 1234778889998888887 7665321 234568999
Q ss_pred HHHHh--h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 374 SFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 374 ~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
+.+.. . +|++.+++|. ..+|+++|+++++++..+++++.+++..+
T Consensus 286 ~~~~~~~~Giptv~ig~p~--------ry~Hs~~E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 286 GAVHLTGTGVPTVVMGPAT--------RHGHCAASIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred HHHHHhCCCCCEEEechhh--------hcccChhheEEHHHHHHHHHHHHHHHHHc
Confidence 97765 4 8998866553 25999999999999999999999998554
No 69
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.67 E-value=2.2e-15 Score=144.92 Aligned_cols=129 Identities=19% Similarity=0.219 Sum_probs=100.4
Q ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec-----------c--------CCceEEEEEcCCCCcEEEEEE
Q 013332 52 MVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-----------V--------AVTGVVGYIGTGQPPFVALRA 112 (445)
Q Consensus 52 ~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~-----------~--------~~~nvia~~~~~~~p~i~l~~ 112 (445)
+..+...+-.-+..|..|.++++||+++|+++|++++.. . ...||++.+++...++|++.+
T Consensus 37 ~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill~A 116 (346)
T PRK10199 37 ARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMA 116 (346)
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEEEE
Confidence 444444455566677889999999999999999987631 1 135799999765458899999
Q ss_pred ecccccCCCCCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHc
Q 013332 113 DMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDA 185 (445)
Q Consensus 113 H~DtVp~~~~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~ 185 (445)
|+|||++....+|++.. +-++++|+ |++++++|.+++.|++. .++.+|.|+++++|| |..|+++++++
T Consensus 117 H~DTV~p~~~~~~~~~~---~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 117 HLDTYAPQSDADVDANL---GGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred EcCcCCCCCCCccccCC---CCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHh
Confidence 99999654333444431 22788998 69999999999999865 467899999999999 77999999986
No 70
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.66 E-value=1.7e-14 Score=140.81 Aligned_cols=128 Identities=18% Similarity=0.223 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcC-CCCcEEEEEEecccccC---------
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT-GQPPFVALRADMDALAM--------- 119 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~-~~~p~i~l~~H~DtVp~--------- 119 (445)
+.+++++++|+++||+|++|.++++++.++|+++|++++.+ ..+|+++.+.+ ..+|+|+|.+|||+|..
T Consensus 3 ~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~D-~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~G 81 (343)
T TIGR03106 3 DYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYELT-RRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDNG 81 (343)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEC-CCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCCC
Confidence 56899999999999999999999999999999999998864 68999998855 33589999999999963
Q ss_pred -------CCC---------------C--------------------------CCc---------c---------------
Q 013332 120 -------EES---------------V--------------------------EWE---------H--------------- 127 (445)
Q Consensus 120 -------~~~---------------~--------------------------~w~---------~--------------- 127 (445)
|.. . .|. .
T Consensus 82 ~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd 161 (343)
T TIGR03106 82 RLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGD 161 (343)
T ss_pred eEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCC
Confidence 100 0 111 0
Q ss_pred ----c----cCCCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCCcc
Q 013332 128 ----K----SKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGG 178 (445)
Q Consensus 128 ----~----~~~~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G 178 (445)
+ ...+|++|||+. |+++++++.+++.|++.+.+++.+|.++|+++||.+.|
T Consensus 162 ~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~g 222 (343)
T TIGR03106 162 FVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSG 222 (343)
T ss_pred EEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCcc
Confidence 0 013578899986 79999999999999987767889999999999994456
No 71
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.61 E-value=1.2e-13 Score=134.79 Aligned_cols=243 Identities=16% Similarity=0.158 Sum_probs=167.6
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC--CCcEEEEEEecccccC-----CCC----
Q 013332 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDALAM-----EES---- 122 (445)
Q Consensus 54 ~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~--~~p~i~l~~H~DtVp~-----~~~---- 122 (445)
++|++|+++|++|++|.+++++++++|++++.+++++ ..+|+++.+.++ .+|+|+|.+|||+|+. .+.
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~D-~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~ 80 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVETD-GLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFR 80 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEE
Confidence 5699999999999999999999999999999988755 579999988653 3589999999999972 110
Q ss_pred ----CCCc------------------------------------------cc---------c--------C---------
Q 013332 123 ----VEWE------------------------------------------HK---------S--------K--------- 130 (445)
Q Consensus 123 ----~~w~------------------------------------------~~---------~--------~--------- 130 (445)
.+|. +. + +
T Consensus 81 ~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~ 160 (350)
T TIGR03107 81 VVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQ 160 (350)
T ss_pred EEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 0111 00 0 0
Q ss_pred -------CCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEeccc
Q 013332 131 -------VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVS 200 (445)
Q Consensus 131 -------~~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~ 200 (445)
.++++.|+.- +.++++++.+++.|++. +++.+++++|++.|| |..|++..... -++|.+|+++..
T Consensus 161 ~~~~~~~~~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~---i~pD~aI~vDv~ 235 (350)
T TIGR03107 161 TETILTANGKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK---FNPDIFFAVDCS 235 (350)
T ss_pred CCeEEEcCCCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh---CCCCEEEEEecC
Confidence 0122334443 48999999999999864 578899999999999 77999976543 246777765421
Q ss_pred CCCCCCceeeccCcccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCc
Q 013332 201 SLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGA 279 (445)
Q Consensus 201 ~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~ 279 (445)
+ ++ .|... + .
T Consensus 236 ~-------------------------------~~d~~~~~-~------------------------------~------- 246 (350)
T TIGR03107 236 P-------------------------------AGDIYGDQ-G------------------------------G------- 246 (350)
T ss_pred C-------------------------------cCCCCCCC-c------------------------------c-------
Confidence 1 11 01000 0 0
Q ss_pred cccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCc
Q 013332 280 FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQ 359 (445)
Q Consensus 280 ~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~ 359 (445)
++.+ |.-+ .. .+. ....++.+.+.+.+++++. |.+
T Consensus 247 ---------------------------~lg~-----------Gp~i--~~--~D~--~~i~~~~l~~~l~~~A~~~-~I~ 281 (350)
T TIGR03107 247 ---------------------------KLGE-----------GTLL--RF--FDP--GHIMLPRMKDFLLTTAEEA-GIK 281 (350)
T ss_pred ---------------------------ccCC-----------CceE--EE--ecC--CCCCCHHHHHHHHHHHHHc-CCC
Confidence 0111 1111 11 111 1234667788888888876 776
Q ss_pred ccccCCCCCccchHH--HHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 360 NIKENRPLMGTEDFS--FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 360 ~~~~~~~~~g~tD~~--~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
... ...+|+||++ .+... +|++..++|.+ .+|++.|.++++++..+++++..++.++
T Consensus 282 ~Q~--~~~~gGtDa~~~~~~~~Gvpt~~i~ip~R--------y~Hs~~e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 282 YQY--YVAKGGTDAGAAHLKNSGVPSTTIGVCAR--------YIHSHQTLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred cEE--ecCCCCchHHHHHHhCCCCcEEEEccCcc--------cccChhheeeHHHHHHHHHHHHHHHHhc
Confidence 542 3455799999 44444 99998777754 3999999999999999999999998775
No 72
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.54 E-value=8.9e-13 Score=127.28 Aligned_cols=253 Identities=19% Similarity=0.212 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCC-cEEEEEEecccccC-----CCC-
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQP-PFVALRADMDALAM-----EES- 122 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~-p~i~l~~H~DtVp~-----~~~- 122 (445)
+++.++|++|.++|++||.|.++.+++++.|+.++.+++.+ ..+|+++++++.++ |.|++.+|||.|-. .+.
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~D-~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEVD-RLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEEc-CCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 56899999999999999999999999999999999998864 58999999987434 55999999999842 110
Q ss_pred -------CCCccc----------cC-------------------------------------------------------
Q 013332 123 -------VEWEHK----------SK------------------------------------------------------- 130 (445)
Q Consensus 123 -------~~w~~~----------~~------------------------------------------------------- 130 (445)
.+|... ..
T Consensus 81 ~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v 160 (355)
T COG1363 81 FLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFV 160 (355)
T ss_pred eEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEE
Confidence 123110 00
Q ss_pred ---------CCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEec
Q 013332 131 ---------VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (445)
Q Consensus 131 ---------~~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~ 198 (445)
.++++-++.- +.+++++|.+++.| + +..++.+++|+|++.|| |..|++....+ -++|.+|.++
T Consensus 161 ~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~---i~pd~aiavd 235 (355)
T COG1363 161 VFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR---IKPDIAIAVD 235 (355)
T ss_pred EEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc---cCCCEEEEEe
Confidence 0011112222 48999999999999 4 56899999999999999 77888876542 2457777654
Q ss_pred ccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCC
Q 013332 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGG 278 (445)
Q Consensus 199 ~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~ 278 (445)
.. +.+. .+ |. + .+ .+.+..
T Consensus 236 ~~---~~~d---~~-----~~----------------~-~~-------------------------------~~~lg~-- 254 (355)
T COG1363 236 VT---PAGD---TP-----GV----------------P-KG-------------------------------DVKLGK-- 254 (355)
T ss_pred cc---cccC---CC-----CC----------------c-cc-------------------------------ccccCC--
Confidence 21 1111 00 00 0 00 000000
Q ss_pred ccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCC
Q 013332 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGV 358 (445)
Q Consensus 279 ~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~ 358 (445)
|..+.+. +.. ...++.+.+.+.+++++. +.
T Consensus 255 -------------------------------------------Gp~i~~~----D~~--~~~~~~l~~~L~~~A~~~-~I 284 (355)
T COG1363 255 -------------------------------------------GPVIRVK----DAS--GIYHPKLRKFLLELAEKN-NI 284 (355)
T ss_pred -------------------------------------------CCEEEEE----cCC--CCCCHHHHHHHHHHHHHc-CC
Confidence 1111111 110 011555666666666666 66
Q ss_pred cccccCCCCCccchHHHHHhh---cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 359 QNIKENRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 359 ~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
+.... ....|+||++.+... +|+...+++.. ..|+|.|.+.++++..+.+++..++..+..
T Consensus 285 p~Q~~-v~~~ggTDA~a~~~~g~gvpta~Igip~r--------y~Hs~~e~~~~~D~~~~~~Ll~~~i~~~~~ 348 (355)
T COG1363 285 PYQVD-VSPGGGTDAGAAHLTGGGVPTALIGIPTR--------YIHSPVEVAHLDDLEATVKLLVAYLESLDR 348 (355)
T ss_pred CeEEE-ecCCCCccHHHHHHcCCCCceEEEecccc--------cccCcceeecHHHHHHHHHHHHHHHHhcch
Confidence 55322 233478999887765 89988776644 499999999999999999999998887654
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.53 E-value=1.4e-12 Score=127.11 Aligned_cols=247 Identities=16% Similarity=0.138 Sum_probs=166.1
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccC-----CC------
Q 013332 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM-----EE------ 121 (445)
Q Consensus 53 ~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~-----~~------ 121 (445)
+++|++|+++|++||.|.++++++.++|+.++.+++.+ ..+|+++..+ .++|+|+|.+|||+|+. .+
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~D-~~GNli~~~g-~~~~kvml~AHmDevG~mV~~I~~~G~l~~ 80 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFD-GLGSFVARKG-NKGPKVAVVGHMDEVGFMVTHIDESGFLRF 80 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEeC-CCCcEEEEEecccccCEEEEEECCCCeEEE
Confidence 46799999999999999999999999999999998754 5799999873 33579999999999962 11
Q ss_pred --CCCCccc----------cC-----------------------------------------------------------
Q 013332 122 --SVEWEHK----------SK----------------------------------------------------------- 130 (445)
Q Consensus 122 --~~~w~~~----------~~----------------------------------------------------------- 130 (445)
..+|... +.
T Consensus 81 ~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~ 160 (356)
T PRK09864 81 TTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEAN 160 (356)
T ss_pred EeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 0122100 00
Q ss_pred ----CCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCC
Q 013332 131 ----VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLF 203 (445)
Q Consensus 131 ----~~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~ 203 (445)
.++++.|+.- +.++++++.+++.|++ ++.+++++|++.|| |..|++..... + ++|.+|+++...
T Consensus 161 ~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~--i-~PDiaIavDvt~-- 231 (356)
T PRK09864 161 FACWGEDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEH--I-KPDVVIVLDTAV-- 231 (356)
T ss_pred cEEEcCCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhc--C-CCCEEEEEeccc--
Confidence 0122333433 4899999999998864 77899999999999 77899987543 2 467777654311
Q ss_pred CCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccc
Q 013332 204 PVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNII 283 (445)
Q Consensus 204 p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~Nvi 283 (445)
.+. .|... .....+.+.+|.
T Consensus 232 -~~d---------------------------~p~~~---------------------------~~~~~~~lG~Gp----- 251 (356)
T PRK09864 232 -AGD---------------------------VPGID---------------------------NIKYPLKLGQGP----- 251 (356)
T ss_pred -CCC---------------------------CCCCc---------------------------ccccccccCCCC-----
Confidence 000 11100 000001111111
Q ss_pred cCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCccccc
Q 013332 284 PDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKE 363 (445)
Q Consensus 284 P~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~ 363 (445)
- +.. .+. ....++.+.+.+.+++++. |.+....
T Consensus 252 ----------------------------------------~--i~~--~D~--~~i~~~~l~~~l~~~A~~~-~Ip~Q~~ 284 (356)
T PRK09864 252 ----------------------------------------G--LML--FDK--RYFPNQKLVAALKSCAAHN-DLPLQFS 284 (356)
T ss_pred ----------------------------------------e--EEE--ccC--CccCCHHHHHHHHHHHHHc-CCCceEE
Confidence 1 111 001 1133667778888888776 7765432
Q ss_pred CCCCCccchHHHHHhh---cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 364 NRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 364 ~~~~~g~tD~~~~~~~---ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
....|+||++.+... +|++..+++.+. +|+|.|-++++++..+++++..++.++
T Consensus 285 -~~~~ggTDa~~i~~~~~Gvpt~~isiP~RY--------~Hs~~e~~~~~D~e~~~~Ll~~~~~~l 341 (356)
T PRK09864 285 -TMKTGATDGGRYNVMGGGRPVVALCLPTRY--------LHANSGMISKADYDALLTLIRDFLTTL 341 (356)
T ss_pred -EcCCCCchHHHHHHhCCCCcEEEEeeccCc--------CCCcceEeEHHHHHHHHHHHHHHHHhc
Confidence 334478999887653 899887777543 999999999999999999999998765
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.32 E-value=4.2e-06 Score=88.28 Aligned_cols=134 Identities=19% Similarity=0.251 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHhC-CCCCc---chHHHHHHHHHHHHhCCC-------Ceeec-----------------cCCceEEEEEc
Q 013332 50 YWMVNIRRKIHEN-PELGF---QEFETSKLIRAELDQMGI-------PYKFP-----------------VAVTGVVGYIG 101 (445)
Q Consensus 50 ~~~~~ll~~l~~i-ps~s~---~E~~~a~~l~~~l~~~G~-------~~~~~-----------------~~~~nvia~~~ 101 (445)
+++...+.++.++ |.+.+ +|..+.+++.+.+.+..= +.+++ .+-.|++.++.
T Consensus 57 ~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~ 136 (834)
T KOG2194|consen 57 ARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKIS 136 (834)
T ss_pred HHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecC
Confidence 5677777778777 55543 455788888877765421 11211 12458999996
Q ss_pred CCC---CcEEEEEEecccccCCCCCCCccccCCCCccccCcch-HHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC
Q 013332 102 TGQ---PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHD-AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG 176 (445)
Q Consensus 102 ~~~---~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k-g~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~ 176 (445)
++. .-.|++++|+|+||.++ |-|-+ .++|++|.++|.+.+....+..+|+|+|...|| +.
T Consensus 137 ~k~~~~~~~lLlnaHfDSvpt~~---------------gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L 201 (834)
T KOG2194|consen 137 PKNGNDKNALLLNAHFDSVPTGP---------------GATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGL 201 (834)
T ss_pred CCCCCccceeeeeccccccCCCC---------------CCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchh
Confidence 542 24799999999999753 32323 468999999999998877789999999999999 66
Q ss_pred ccHHHHHHcc-CCCCcceeEEec
Q 013332 177 GGAKKMLDAG-ALENVEAIFGLH 198 (445)
Q Consensus 177 ~G~~~l~~~~-~~~~~d~~i~~~ 198 (445)
.|+..++.+. +.+.+.+.|.++
T Consensus 202 ~gsH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 202 LGSHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred hhcccceecChhhhhhheEEecc
Confidence 8988888744 334566677543
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.09 E-value=8.8e-06 Score=72.43 Aligned_cols=81 Identities=30% Similarity=0.500 Sum_probs=58.8
Q ss_pred EEEEEEecccccCCCCCCCccccCCCCccccCcc-h--HHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHH
Q 013332 107 FVALRADMDALAMEESVEWEHKSKVPGKMHACGH-D--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKM 182 (445)
Q Consensus 107 ~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~-k--g~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l 182 (445)
.|++.+|+|+++ +.. ++ -++.|+ | .|++++|..++.|++.+.+++++|+|+|..+|| |..|++++
T Consensus 2 ~ivi~aH~Ds~~-~~~---------~~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDA---------DG-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CCC----------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-CcC---------CC-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 589999999998 221 12 466777 2 789999999999999777788999999999999 77999999
Q ss_pred HHcc--CCCCcceeEEec
Q 013332 183 LDAG--ALENVEAIFGLH 198 (445)
Q Consensus 183 ~~~~--~~~~~d~~i~~~ 198 (445)
+++. ...++.++|.++
T Consensus 71 ~~~~~~~~~~~~~~inlD 88 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINLD 88 (179)
T ss_dssp HHHHHCHHHHEEEEEEEC
T ss_pred HHhhhcccccceeEEecc
Confidence 9631 122344556543
No 76
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=97.13 E-value=0.014 Score=54.03 Aligned_cols=140 Identities=15% Similarity=0.148 Sum_probs=91.5
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHHHhCCCC--CcchHHHHHHHHHHHHhCCCCeeec---c-------CCceEEEEEcC
Q 013332 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPEL--GFQEFETSKLIRAELDQMGIPYKFP---V-------AVTGVVGYIGT 102 (445)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~--s~~E~~~a~~l~~~l~~~G~~~~~~---~-------~~~nvia~~~~ 102 (445)
..+..+..+....-..++.+.++-+. +|.+ |..-.++.+||.+.|+.+|+.++.+ + .-.|+++++..
T Consensus 36 l~~~~lr~i~~~s~~~~~~~~L~p~l-v~Rvpgs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~ 114 (338)
T KOG3946|consen 36 LAESRLRAINPDSDWNRLWENLLPIL-VPRVPGSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDP 114 (338)
T ss_pred ccHHHHHHhcCCCCHHHHHHhhhhhh-ccccCCCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCC
Confidence 44555555554332256677755543 3433 3345789999999999999998862 1 13589999866
Q ss_pred CCCcEEEEEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhc----cccCCceEEEEEeecCCC---
Q 013332 103 GQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVF----RHEIKGTIVLVFQPAEEG--- 175 (445)
Q Consensus 103 ~~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~----~~~l~~~i~~i~~~dEEg--- 175 (445)
.....+++.+|+|+--.. .|.| +-+-|+-..+|+++..+++|.+. .....-.+.++|--+||.
T Consensus 115 ~A~r~lVlachydsk~~p---~~~~-------vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~e 184 (338)
T KOG3946|consen 115 NASRYLVLACHYDSKIFP---GGMF-------VGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEE 184 (338)
T ss_pred CcchheeeecccccccCC---Ccce-------EeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhh
Confidence 544789999999998321 1111 11223346788999988887643 123446799999999992
Q ss_pred ------CccHHHHHHc
Q 013332 176 ------GGGAKKMLDA 185 (445)
Q Consensus 176 ------~~G~~~l~~~ 185 (445)
..|++++.++
T Consensus 185 W~p~DSlYGsRhLA~~ 200 (338)
T KOG3946|consen 185 WGPEDSLYGSRHLAAK 200 (338)
T ss_pred cCCccccchHHHHHHH
Confidence 2688888653
No 77
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=96.38 E-value=0.049 Score=53.49 Aligned_cols=112 Identities=21% Similarity=0.316 Sum_probs=75.6
Q ss_pred HHHHHHHHhCCCCeeec---------cCCceEEEEEcCC--------CCcEEEEEEecccccCCCCCCCccccCCCCccc
Q 013332 74 KLIRAELDQMGIPYKFP---------VAVTGVVGYIGTG--------QPPFVALRADMDALAMEESVEWEHKSKVPGKMH 136 (445)
Q Consensus 74 ~~l~~~l~~~G~~~~~~---------~~~~nvia~~~~~--------~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~ 136 (445)
+.+..-+...|+..... ..-.|+.+++..+ .-|+|++.+|+||..+.+ | +
T Consensus 165 ~~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~--l 231 (555)
T KOG2526|consen 165 QHLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------G--L 231 (555)
T ss_pred HHHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCC-----------C--C
Confidence 34555556667776541 1246899998621 239999999999997644 1 2
Q ss_pred cCcc--h-HHHHHHHHHHHHHHhcc----ccCCceEEEEEeecCC-CCccHHHHHHc---cCCCCcceeEEec
Q 013332 137 ACGH--D-AHVAMLLGAAKMLQVFR----HEIKGTIVLVFQPAEE-GGGGAKKMLDA---GALENVEAIFGLH 198 (445)
Q Consensus 137 GrG~--k-g~~aa~l~a~~~l~~~~----~~l~~~i~~i~~~dEE-g~~G~~~l~~~---~~~~~~d~~i~~~ 198 (445)
--|+ + .|+.++|..++.+.+.- -..+.|+.|+.+.+-- .-.|.++.++- .+-+++|+++|++
T Consensus 232 svgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 232 SVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 3333 2 56778888888877532 2457899999998866 45788888762 1223688999864
No 78
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=96.28 E-value=0.014 Score=59.60 Aligned_cols=44 Identities=32% Similarity=0.243 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccC
Q 013332 142 AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA 187 (445)
Q Consensus 142 g~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~ 187 (445)
.|++++|.+++.|+... ++.+|.|++...|| |..|+.+++.+..
T Consensus 231 sGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 231 SGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred HHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 68999999999999864 88999999999999 7899999998754
No 79
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=95.62 E-value=0.019 Score=55.11 Aligned_cols=63 Identities=24% Similarity=0.240 Sum_probs=49.4
Q ss_pred CCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEec
Q 013332 131 VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (445)
Q Consensus 131 ~~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~ 198 (445)
.++++.|+.. ..++++++.+++.|++. .++.+++|+|++.|| |..|++..... . ++|.+|+++
T Consensus 124 ~~~~i~gkalDdR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~-i--~PD~ai~vD 189 (292)
T PF05343_consen 124 GNGRIVGKALDDRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFR-I--KPDIAIAVD 189 (292)
T ss_dssp TTTEEEETTHHHHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHH-H---CSEEEEEE
T ss_pred CCCEEEEEeCCchhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeecccc-c--CCCEEEEEe
Confidence 4566888887 49999999999999875 456999999999999 77899987654 1 457777654
No 80
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=95.22 E-value=0.055 Score=57.73 Aligned_cols=77 Identities=22% Similarity=0.260 Sum_probs=56.7
Q ss_pred ceEEEEEcCC--CCcEEEEEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHH---HHhccccCCceEEEE
Q 013332 94 TGVVGYIGTG--QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKM---LQVFRHEIKGTIVLV 168 (445)
Q Consensus 94 ~nvia~~~~~--~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~---l~~~~~~l~~~i~~i 168 (445)
.|++|.+.|. +...|++.+|-|..-.|.. + ...|.+.++..++. +++.|.+|.++|+|+
T Consensus 339 ~NIig~I~Gs~epD~~ViigahrDSw~~Ga~-------------d---p~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~ 402 (702)
T KOG2195|consen 339 QNIIGKIEGSEEPDRYVIIGAHRDSWTFGAI-------------D---PNSGTALLLEIARALSKLKKRGWRPRRTILFA 402 (702)
T ss_pred eeEEEEEecCcCCCeEEEEeccccccccCCc-------------C---CCccHHHHHHHHHHHHHHHHcCCCccceEEEE
Confidence 5899999763 4578999999998754311 0 01345555555544 456788999999999
Q ss_pred EeecCC-CCccHHHHHHcc
Q 013332 169 FQPAEE-GGGGAKKMLDAG 186 (445)
Q Consensus 169 ~~~dEE-g~~G~~~l~~~~ 186 (445)
...+|| |..|+-.+++..
T Consensus 403 sWdAeEfGliGStE~~E~~ 421 (702)
T KOG2195|consen 403 SWDAEEFGLLGSTEWAEEY 421 (702)
T ss_pred EccchhccccccHHHHHHH
Confidence 999999 779999998854
No 81
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=93.78 E-value=0.05 Score=52.27 Aligned_cols=70 Identities=20% Similarity=0.221 Sum_probs=55.6
Q ss_pred cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh---cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013332 339 VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 415 (445)
Q Consensus 339 ~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~ 415 (445)
..++.+.+.+.+++++. +.+.... ....++||++.++.. +|++..+++... +|+|.|.++++++..+
T Consensus 220 i~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~ry--------~Hs~~e~~~~~Di~~~ 289 (292)
T PF05343_consen 220 IPNPKLVDKLREIAEEN-GIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPCRY--------MHSPVEVIDLDDIEAT 289 (292)
T ss_dssp ESHHHHHHHHHHHHHHT-T--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEEBS--------TTSTTEEEEHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEeccccc--------CCCcceEEEHHHHHHH
Confidence 45778999999999998 8876533 567889999999864 788887777654 9999999999999988
Q ss_pred HHH
Q 013332 416 AAL 418 (445)
Q Consensus 416 ~~~ 418 (445)
+++
T Consensus 290 ~~L 292 (292)
T PF05343_consen 290 IDL 292 (292)
T ss_dssp HHH
T ss_pred hhC
Confidence 764
No 82
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=92.86 E-value=0.43 Score=44.23 Aligned_cols=67 Identities=19% Similarity=0.312 Sum_probs=51.8
Q ss_pred cEEEEEEecccccCCCCCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhc---cccCCceEEEEEeecCC-CCcc
Q 013332 106 PFVALRADMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF---RHEIKGTIVLVFQPAEE-GGGG 178 (445)
Q Consensus 106 p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~---~~~l~~~i~~i~~~dEE-g~~G 178 (445)
|.|++.+.||+.-.=+ +. +.|+ -.|++++|+++++|.+. ...++++|.|.|..+|- +-.|
T Consensus 1 ~iIlv~armDs~s~F~-----------~~--s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiG 67 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------DL--SPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIG 67 (234)
T ss_pred CEEEEEecccchhccc-----------CC--CCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccc
Confidence 6799999999985311 22 4555 27889999999999765 23578999999999999 6689
Q ss_pred HHHHHHc
Q 013332 179 AKKMLDA 185 (445)
Q Consensus 179 ~~~l~~~ 185 (445)
++.++.+
T Consensus 68 S~R~vyD 74 (234)
T PF05450_consen 68 SSRFVYD 74 (234)
T ss_pred hHHHHHH
Confidence 9988753
No 83
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=92.82 E-value=1.9 Score=44.33 Aligned_cols=132 Identities=13% Similarity=0.094 Sum_probs=82.6
Q ss_pred HHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec-------cCCceEEEEEcCC-CCcEEEE
Q 013332 39 FLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------VAVTGVVGYIGTG-QPPFVAL 110 (445)
Q Consensus 39 ~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~-------~~~~nvia~~~~~-~~p~i~l 110 (445)
..+.++.-+...+.+.+.|+|+..|.--..-...++++.+.+++.|+++++. .+.+.+++.=.++ .+|.++.
T Consensus 160 ~~~~~~~~~~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~ 239 (483)
T PRK00913 160 AEKAIAHGEAIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIV 239 (483)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEE
Confidence 3444444445577889999999999866666778999999999999999872 2233444443333 3466666
Q ss_pred EEecc----cccCCCCCCCcccc----CC-CCccccCcc-hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 111 RADMD----ALAMEESVEWEHKS----KV-PGKMHACGH-DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 111 ~~H~D----tVp~~~~~~w~~~~----~~-~g~l~GrG~-kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
.-+-- .+-+|- +-+|++ .+ .+-|++-=. .+|.|+.+++++++.+. +++-+|..++...|-
T Consensus 240 l~Y~g~~~~i~LVGK--GITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~l--kl~vnV~~v~~l~EN 309 (483)
T PRK00913 240 LEYKGGKKPIALVGK--GLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAEL--KLPVNVVGVVAACEN 309 (483)
T ss_pred EEECCCCCeEEEEcC--ceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 55531 111111 223431 11 111221111 39999999999999876 578888888887765
No 84
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=92.45 E-value=3 Score=42.89 Aligned_cols=130 Identities=16% Similarity=0.172 Sum_probs=81.2
Q ss_pred HhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec-------cCCceEEEEEcCC-CCcEEEEEE
Q 013332 41 DFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------VAVTGVVGYIGTG-QPPFVALRA 112 (445)
Q Consensus 41 ~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~-------~~~~nvia~~~~~-~~p~i~l~~ 112 (445)
+.++.-+...+-+.+.|+|+..|.--..-...++++++.+++.|+++++. .+.+.+++.=.++ .+|.++..-
T Consensus 145 ~~~~~~~~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~ 224 (468)
T cd00433 145 AALERGEAIAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLE 224 (468)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEE
Confidence 34443334577889999999999866666778999999999999999873 2233444443333 357777665
Q ss_pred ecccccCCCC-----CCCccccCCCCc-c-ccCcc------hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 113 DMDALAMEES-----VEWEHKSKVPGK-M-HACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 113 H~DtVp~~~~-----~~w~~~~~~~g~-l-~GrG~------kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
+-..-+.... .+-+|+ .+|. | -+.++ .+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 225 Y~g~~~~~~~i~LVGKGiTFD--sGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l--~~~vnV~~i~~~~EN 295 (468)
T cd00433 225 YKGKGASKKPIALVGKGITFD--TGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAEL--KLPVNVVGVLPLAEN 295 (468)
T ss_pred ECCCCCCCCcEEEEcCceEec--CCCccccCccChhhccccchhHHHHHHHHHHHHHc--CCCceEEEEEEeeec
Confidence 5432110000 011232 1121 1 12222 39999999999999886 568888888877665
No 85
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=91.13 E-value=3.8 Score=39.53 Aligned_cols=110 Identities=19% Similarity=0.187 Sum_probs=69.8
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc------CCce---------------EEEEEcC-C--CCcEE
Q 013332 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTG---------------VVGYIGT-G--QPPFV 108 (445)
Q Consensus 53 ~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~------~~~n---------------via~~~~-~--~~p~i 108 (445)
+++.|+|+..|.--..-...++++++.+++.|+++++.+ .+.| ++.+|.+ + ..++|
T Consensus 1 vn~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i 80 (311)
T PF00883_consen 1 VNLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPI 80 (311)
T ss_dssp HHHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEE
T ss_pred ChHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccE
Confidence 467899999998777778899999999999999887621 0111 3334422 2 13455
Q ss_pred EEEEecccccCCCCCCCcccc----CC-CCccccC-cchHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 109 ALRADMDALAMEESVEWEHKS----KV-PGKMHAC-GHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 109 ~l~~H~DtVp~~~~~~w~~~~----~~-~g~l~Gr-G~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
+|.|- .-+|++ .+ .+.|++- +-++|.|+.+++++++.+. +++-+|..++...|-
T Consensus 81 ~LVGK----------GiTFDtGG~~lKp~~~M~~Mk~DM~GAAaV~ga~~aia~l--k~~vnV~~~l~~~EN 140 (311)
T PF00883_consen 81 ALVGK----------GITFDTGGLSLKPSGGMEGMKYDMGGAAAVLGAMRAIAKL--KLPVNVVAVLPLAEN 140 (311)
T ss_dssp EEEEE----------EEEEEE-TTSSSCSTTGGGGGGGGHHHHHHHHHHHHHHHC--T-SSEEEEEEEEEEE
T ss_pred EEEcc----------eEEEecCCccCCCCcchhhcccCcchHHHHHHHHHHHHHc--CCCceEEEEEEcccc
Confidence 55553 223331 11 2233331 1159999999999999876 567888888887765
No 86
>PRK02256 putative aminopeptidase 1; Provisional
Probab=90.65 E-value=0.38 Score=49.19 Aligned_cols=76 Identities=11% Similarity=-0.007 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCC----CCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 340 NNKNLHEHFQKVAADMLGVQNIKENR----PLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 340 ~d~~l~~~~~~a~~~~~g~~~~~~~~----~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
.+..+...+++++++. |.+...... ..+|+||...+++. +|++-.|++.. .+|++.|-+..+++..
T Consensus 380 ~~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l--------~MHS~rE~~~~~D~~~ 450 (462)
T PRK02256 380 ANAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALL--------SMHSPFEIASKADIYE 450 (462)
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhhh--------ccccHHHHhhHHHHHH
Confidence 4778888999998887 876532111 23689997777755 99887665543 3999999999999999
Q ss_pred HHHHHHHHHH
Q 013332 415 GAALHASLAT 424 (445)
Q Consensus 415 ~~~~~~~~i~ 424 (445)
.++++..++.
T Consensus 451 ~~~ll~~f~~ 460 (462)
T PRK02256 451 TYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHh
Confidence 9999987754
No 87
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=89.65 E-value=3.5 Score=42.16 Aligned_cols=123 Identities=13% Similarity=0.101 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc------CCceEEEEE-cCC-CCcEEEEEEecccccCCC
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYI-GTG-QPPFVALRADMDALAMEE 121 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~------~~~nvia~~-~~~-~~p~i~l~~H~DtVp~~~ 121 (445)
.+...+.|+|..-|.--..-...++++.+++...|+.+++.+ ..-|.+.-. .+. .+|.++.+.|.++=|...
T Consensus 189 ~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~~~ 268 (513)
T KOG2597|consen 189 AAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGADK 268 (513)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCCcc
Confidence 566778888888877555567889999999999998877621 223333333 232 358888888877654322
Q ss_pred C-----CCCcccc-----CCCCcccc-CcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 122 S-----VEWEHKS-----KVPGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 122 ~-----~~w~~~~-----~~~g~l~G-rG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
. .+.+|++ ...+.|.+ ||.++|.|+++++++++.+. .++-++.+++.-.|-
T Consensus 269 ~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l--~~~in~~~v~plcEN 330 (513)
T KOG2597|consen 269 TILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQL--SLPINVHAVLPLCEN 330 (513)
T ss_pred eEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhc--CCCCceEEEEeeecc
Confidence 1 0112321 11112222 23358899999999998875 455888888877766
No 88
>PRK05015 aminopeptidase B; Provisional
Probab=89.61 E-value=9.8 Score=38.23 Aligned_cols=119 Identities=13% Similarity=0.124 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC---CCCeeec-------cCCceEEEEEcCC-CCcEEEEEEeccccc
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQM---GIPYKFP-------VAVTGVVGYIGTG-QPPFVALRADMDALA 118 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~---G~~~~~~-------~~~~nvia~~~~~-~~p~i~l~~H~DtVp 118 (445)
-+.+++.|+|+..|+--..-...++..+++++++ ++++++. .+.+.+++.=.++ .+|.++.. +| -|
T Consensus 100 ~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~pP~lv~L-~Y--~~ 176 (424)
T PRK05015 100 LKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSERPPVLLAL-DY--NP 176 (424)
T ss_pred HHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCCCCEEEEE-Ee--cC
Confidence 4568899999999986555566777777777776 5777762 2233444433333 33555533 22 34
Q ss_pred CCCCCCCcc--ccC-------CCCc-cc-cCc---c---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 119 MEESVEWEH--KSK-------VPGK-MH-ACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 119 ~~~~~~w~~--~~~-------~~g~-l~-GrG---~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
.++. +.+. -.+ .+|+ |- +-| + .+|.|+.++++.++.+. .++.+|..++...|-
T Consensus 177 ~g~~-~~~v~~aLVGKGITFDSGG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~--~l~~nV~~il~~aEN 246 (424)
T PRK05015 177 TGDP-DAPVYACLVGKGITFDSGGYSIKPSAGMDSMKSDMGGAATVTGALALAITR--GLNKRVKLFLCCAEN 246 (424)
T ss_pred CCCC-CCCeeEEEecCceEecCCCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhc--CCCceEEEEEEeccc
Confidence 4332 2232 111 1121 11 112 2 38899999999887765 578899999888776
No 89
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=88.72 E-value=7.4 Score=40.40 Aligned_cols=127 Identities=13% Similarity=0.048 Sum_probs=77.4
Q ss_pred hhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCee-ec-------cCCceEEEEEcCC-CCcEEEEEE
Q 013332 42 FAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYK-FP-------VAVTGVVGYIGTG-QPPFVALRA 112 (445)
Q Consensus 42 ~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~-~~-------~~~~nvia~~~~~-~~p~i~l~~ 112 (445)
.++..++..+.+.+.|+|+.-|+--..-...++.+.+.+.+.|++++ +. .+.+.+++.=.++ ..|.++...
T Consensus 204 ~~~~g~~ia~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~ 283 (569)
T PTZ00412 204 AIAAGNIIGHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFE 283 (569)
T ss_pred HHHHHHHHHHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEE
Confidence 34444455778889999999998655556678888888888999996 42 2334455443343 346666554
Q ss_pred ecccccCCCCCCCccccCCCCccc---------cCc---c---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 113 DMDALAMEESVEWEHKSKVPGKMH---------ACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 113 H~DtVp~~~~~~w~~~~~~~g~l~---------GrG---~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
|. |... ...+.-.+-.|+-| +-+ + .+|.|+.+++++++.+. +++.+|..++...|-
T Consensus 284 Y~---g~~~-~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~L--klpvnVv~iiplaEN 354 (569)
T PTZ00412 284 YI---GNPR-SSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKL--QLPVNVVAAVGLAEN 354 (569)
T ss_pred eC---CCCC-CCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHc--CCCeEEEEEEEhhhc
Confidence 42 2211 12222111111111 112 2 38999999999999875 567888888776665
No 90
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=88.41 E-value=1.1 Score=46.00 Aligned_cols=79 Identities=11% Similarity=-0.048 Sum_probs=59.1
Q ss_pred cCCHHHHHHHHHHHHHhcCCccccc--CCCCCccchHHHHHhh---cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchH
Q 013332 339 VNNKNLHEHFQKVAADMLGVQNIKE--NRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALP 413 (445)
Q Consensus 339 ~~d~~l~~~~~~a~~~~~g~~~~~~--~~~~~g~tD~~~~~~~---ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~ 413 (445)
..|+.+...+++++++. |.+.... ....++|+|.+.+... +|++-.|++.. .+|++.|-+..+++.
T Consensus 372 ~td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l--------~MHS~rE~~~~~D~~ 442 (465)
T PTZ00371 372 ATNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQL--------AMHSIREMCGVVDIY 442 (465)
T ss_pred ccCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhhc--------ccccHHHHccHHHHH
Confidence 35788999999999987 8764321 1234567788777652 88876655533 499999999999999
Q ss_pred HHHHHHHHHHHHH
Q 013332 414 YGAALHASLATRY 426 (445)
Q Consensus 414 ~~~~~~~~~i~~l 426 (445)
..++++..++..+
T Consensus 443 ~~~~l~~af~~~~ 455 (465)
T PTZ00371 443 YLVKLIKAFFTNY 455 (465)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887643
No 91
>PRK02813 putative aminopeptidase 2; Provisional
Probab=87.63 E-value=0.86 Score=46.29 Aligned_cols=75 Identities=11% Similarity=-0.050 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccC--CCCCccchHHHHHh--h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 340 NNKNLHEHFQKVAADMLGVQNIKEN--RPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 340 ~d~~l~~~~~~a~~~~~g~~~~~~~--~~~~g~tD~~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
+|......+++++++. |.+..... ...+||+|.+.+.. . +|++-.|++.. .+|++.|-+..+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l--------~MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPML--------AMHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhc--------ccccHHHHccHHHHHH
Confidence 4677888889998887 87643211 22347888887765 2 88876655543 4999999999999999
Q ss_pred HHHHHHHHH
Q 013332 415 GAALHASLA 423 (445)
Q Consensus 415 ~~~~~~~~i 423 (445)
.++++..++
T Consensus 417 ~~~l~~~f~ 425 (428)
T PRK02813 417 LIKALTAFF 425 (428)
T ss_pred HHHHHHHHh
Confidence 999988765
No 92
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=85.11 E-value=1.6 Score=45.16 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=39.6
Q ss_pred CCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHH
Q 013332 265 DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMK 316 (445)
Q Consensus 265 ~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~ 316 (445)
...|+|++.++++ |++|.+++|+|++++++++++.+.+++ .++.
T Consensus 336 ~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~--~~~~ 379 (477)
T TIGR01893 336 VESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIES--IAKL 379 (477)
T ss_pred EEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHH--Hhhh
Confidence 4578999999976 788999999999999999999999999 8874
No 93
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=80.95 E-value=0.53 Score=36.94 Aligned_cols=13 Identities=38% Similarity=0.378 Sum_probs=7.4
Q ss_pred CchhhHHHHHHHH
Q 013332 1 MGSSKLLSLLVTL 13 (445)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (445)
|+|++++++.+++
T Consensus 1 MaSK~~llL~l~L 13 (95)
T PF07172_consen 1 MASKAFLLLGLLL 13 (95)
T ss_pred CchhHHHHHHHHH
Confidence 8866655554443
No 94
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=75.90 E-value=46 Score=34.34 Aligned_cols=119 Identities=18% Similarity=0.219 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCC-CCeeec-------cCCceEEEEEcCC-CCcEEEEEEeccccc
Q 013332 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG-IPYKFP-------VAVTGVVGYIGTG-QPPFVALRADMDALA 118 (445)
Q Consensus 48 ~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G-~~~~~~-------~~~~nvia~~~~~-~~p~i~l~~H~DtVp 118 (445)
...+.+.+.|+|+..|.--..-...++. ++.|.+.+ +++++. .+.+.+++.=.++ ..|.++.. +=-+
T Consensus 165 ai~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prlivl---~y~g 240 (485)
T COG0260 165 AIAEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIVL---EYNG 240 (485)
T ss_pred HHHHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEEE---EcCC
Confidence 3467889999999999866555666777 66677665 777762 2233444433333 24655532 2222
Q ss_pred CCCC--------CCCccccCCCCc-cc-cCc---ch---HHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 119 MEES--------VEWEHKSKVPGK-MH-ACG---HD---AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 119 ~~~~--------~~w~~~~~~~g~-l~-GrG---~k---g~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
.++. .+-+|++ +|. |- +-| +| ||.|+.++++.++.+. +++-++..+....|-
T Consensus 241 ~~~~~~~iaLVGKGitFDs--GGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l--~l~vnv~~vl~~~EN 308 (485)
T COG0260 241 KGKAKKPIALVGKGITFDS--GGISIKPAAGMDTMKYDMGGAAAVLGAMRALAEL--KLPVNVVGVLPAVEN 308 (485)
T ss_pred CCCCCceEEEEcCceeecC--CCcccCCccchhhhhcccchHHHHHHHHHHHHHc--CCCceEEEEEeeecc
Confidence 2110 1222331 221 11 222 22 8999999999999886 577888888777665
No 95
>PF10829 DUF2554: Protein of unknown function (DUF2554); InterPro: IPR020117 This entry contains proteins with no known function.
Probab=64.06 E-value=9.1 Score=27.76 Aligned_cols=20 Identities=25% Similarity=0.145 Sum_probs=17.8
Q ss_pred hhhHHHHHHHHHHhhcCccc
Q 013332 3 SSKLLSLLVTLYLLAPTSIS 22 (445)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~ 22 (445)
|+|.++.++++|++||.+..
T Consensus 2 ~~k~lS~~lL~caLFSGqll 21 (76)
T PF10829_consen 2 FKKGLSALLLICALFSGQLL 21 (76)
T ss_pred hHHHHHHHHHHHHHhcchHH
Confidence 68999999999999999844
No 96
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=60.36 E-value=20 Score=35.09 Aligned_cols=71 Identities=24% Similarity=0.187 Sum_probs=44.9
Q ss_pred ceEEEEEcCCCCcEEEEEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecC
Q 013332 94 TGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAE 173 (445)
Q Consensus 94 ~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dE 173 (445)
.|+|+.-++ .+.++++.+|.|+=..|.. |+. .|+++++.++..|...+. .+-++..+.|
T Consensus 179 y~~Ia~~~~-en~vv~i~AH~DHW~~G~t---------DN~-------lg~~~AV~~~~~lr~~~~----~~~lv~FtAE 237 (486)
T COG4882 179 YNVIAVDGG-ENGVVLIGAHLDHWYTGFT---------DNI-------LGVAQAVETAGRLRGRGL----AAGLVVFTAE 237 (486)
T ss_pred EEEEEecCC-CCCceEEeechhhhhhccc---------chh-------hhHHHHHHHHHHHhhcCc----ceeEEEEecc
Confidence 456554333 3478999999998876542 233 367888888888876542 3455555566
Q ss_pred C-CC---------ccHHHHHHc
Q 013332 174 E-GG---------GGAKKMLDA 185 (445)
Q Consensus 174 E-g~---------~G~~~l~~~ 185 (445)
| |+ .|++.++++
T Consensus 238 E~g~p~~~sfyWa~GSr~~lk~ 259 (486)
T COG4882 238 EHGMPGMASFYWAAGSRGLLKE 259 (486)
T ss_pred ccCCCCCcceeecccchHHHhh
Confidence 6 54 366766664
No 97
>PRK02256 putative aminopeptidase 1; Provisional
Probab=50.57 E-value=25 Score=36.12 Aligned_cols=44 Identities=27% Similarity=0.298 Sum_probs=29.7
Q ss_pred CCccccCcch--HHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccH
Q 013332 132 PGKMHACGHD--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGA 179 (445)
Q Consensus 132 ~g~l~GrG~k--g~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~ 179 (445)
++.|.|.+-| .++.+++.++..+. .++..++++++..|| |+.|+
T Consensus 251 ~efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~ga 297 (462)
T PRK02256 251 RSLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEGN 297 (462)
T ss_pred cceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcch
Confidence 3556666663 66677666665442 456789999999999 65443
No 98
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=45.37 E-value=45 Score=30.88 Aligned_cols=84 Identities=15% Similarity=0.242 Sum_probs=51.4
Q ss_pred CcEEEEEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHH--HhccccCCceEEEEEeecCC--C-----
Q 013332 105 PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKML--QVFRHEIKGTIVLVFQPAEE--G----- 175 (445)
Q Consensus 105 ~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l--~~~~~~l~~~i~~i~~~dEE--g----- 175 (445)
.|++.+.|-+=-+-+.++. -|.. -..||.++++..|++.+ ++.|..|++++.+.---+-- .
T Consensus 31 aptlGIiGRLGgigARP~~--------iGlV--SDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~P 100 (276)
T PF06675_consen 31 APTLGIIGRLGGIGARPER--------IGLV--SDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHDP 100 (276)
T ss_pred CCeeEEEeecccccccccc--------eeee--ecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCCC
Confidence 4899998877666543210 0110 11256677776666654 46788899999987443322 1
Q ss_pred -----C-ccHHHHHHccCCCCcceeEEec
Q 013332 176 -----G-GGAKKMLDAGALENVEAIFGLH 198 (445)
Q Consensus 176 -----~-~G~~~l~~~~~~~~~d~~i~~~ 198 (445)
+ .+...+.++......|+++..+
T Consensus 101 vpFM~sPv~~~~~n~~EV~p~mdAILSiD 129 (276)
T PF06675_consen 101 VPFMGSPVDMATMNRHEVDPEMDAILSID 129 (276)
T ss_pred cccccCccCHHHHHHhhcCcccceEEEEe
Confidence 1 3566676665556788998765
No 99
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=41.76 E-value=64 Score=24.40 Aligned_cols=57 Identities=11% Similarity=0.102 Sum_probs=35.7
Q ss_pred cEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecc--cCCCCcccCCHHHHHHHH
Q 013332 286 SVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNLHEHFQ 349 (445)
Q Consensus 286 ~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~d~~l~~~~~ 349 (445)
+.+.+|-||.+++....++.+.|.+ .++-. +-.+.+.+.. ....++. .|..+-.++.
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~--kLkl~----~e~i~LsYkde~s~~~v~l-~d~dle~aws 66 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISS--KLELP----AEHITLSYKSEASGEDVIL-SDTNMEDVWS 66 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHH--HhCCC----chhcEEEeccCCCCCccCc-ChHHHHHHHH
Confidence 4567899999999999999999988 76532 2233444432 2334444 4555544443
No 100
>TIGR02837 spore_II_R stage II sporulation protein R. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage II sporulation protein R.
Probab=36.97 E-value=1.2e+02 Score=26.49 Aligned_cols=17 Identities=18% Similarity=0.415 Sum_probs=10.5
Q ss_pred HHHHHHHHHHhCCCCee
Q 013332 72 TSKLIRAELDQMGIPYK 88 (445)
Q Consensus 72 ~a~~l~~~l~~~G~~~~ 88 (445)
+-+...+.+++.|++..
T Consensus 92 Ie~~a~~~l~~~G~~y~ 108 (168)
T TIGR02837 92 IERIAESVIKAEGADYK 108 (168)
T ss_pred HHHHHHHHHHHhCCCCC
Confidence 34445667777787643
No 101
>PRK06156 hypothetical protein; Provisional
Probab=30.38 E-value=2.7e+02 Score=29.14 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=21.7
Q ss_pred eEEEEEEEcCCccccccCcEEEEEE
Q 013332 268 VLTVAKFEGGGAFNIIPDSVTIGGT 292 (445)
Q Consensus 268 t~~i~~i~gG~~~NviP~~a~~~~d 292 (445)
+.++..++||...|+||+.|.+.+.
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEEEe
Confidence 5678889999999999999998843
No 102
>PF11853 DUF3373: Protein of unknown function (DUF3373); InterPro: IPR021803 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 472 to 574 amino acids in length.
Probab=29.36 E-value=23 Score=36.30 Aligned_cols=17 Identities=35% Similarity=0.231 Sum_probs=11.6
Q ss_pred hhhHHHHHHHHHHhhcCc
Q 013332 3 SSKLLSLLVTLYLLAPTS 20 (445)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~ 20 (445)
|+|+++++|+.++ +.++
T Consensus 1 Mkk~~~l~l~aal-l~~s 17 (489)
T PF11853_consen 1 MKKLISLSLAAAL-LFLS 17 (489)
T ss_pred CchhHHHHHHHHH-HHhc
Confidence 5788888887776 4444
No 103
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=28.82 E-value=33 Score=29.61 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=27.6
Q ss_pred HHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc
Q 013332 59 IHENPELGFQEFETSKLIRAELDQMGIPYKFPV 91 (445)
Q Consensus 59 l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~ 91 (445)
|+-.-+..|+-+++|++|+..|++.|.+|++.+
T Consensus 4 LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~d 36 (175)
T COG4635 4 LILYSTRDGQTRKIAEYIASHLRESGIQVDIQD 36 (175)
T ss_pred EEEEecCCCcHHHHHHHHHHHhhhcCCeeeeee
Confidence 455566678899999999999999999998753
No 104
>PRK02813 putative aminopeptidase 2; Provisional
Probab=28.41 E-value=65 Score=32.84 Aligned_cols=43 Identities=26% Similarity=0.168 Sum_probs=26.7
Q ss_pred ccccCcch--HHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCc---cHHH
Q 013332 134 KMHACGHD--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG---GAKK 181 (445)
Q Consensus 134 ~l~GrG~k--g~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~---G~~~ 181 (445)
.+.|.+-| .++.+++.++..++ . +..++++++..|| |+. |++.
T Consensus 227 ~i~s~~lDnr~~~~~~l~al~~~~----~-~~~~~~~~~d~EEVGs~~~~GA~s 275 (428)
T PRK02813 227 FISSGRLDNLSSCHAGLEALLAAA----S-DATNVLAAFDHEEVGSATKQGADS 275 (428)
T ss_pred EEEEecchhHHHHHHHHHHHHhcC----C-CCeEEEEEEecCccCCCCCcccCc
Confidence 34444443 55555555554432 1 6789999999999 665 7663
No 105
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=27.84 E-value=68 Score=32.46 Aligned_cols=69 Identities=17% Similarity=0.227 Sum_probs=40.2
Q ss_pred cEEEEEEecccccC-CCCCCCccc------cCCCCccc-cCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC
Q 013332 106 PFVALRADMDALAM-EESVEWEHK------SKVPGKMH-ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG 176 (445)
Q Consensus 106 p~i~l~~H~DtVp~-~~~~~w~~~------~~~~g~l~-GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~ 176 (445)
..+.|.+|+|.||. +......+. .+++.++- .+|++- ++..+. +..|. ....++.+.++++|| +.
T Consensus 62 ~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~-i~~~~~-~a~L~----~~~~P~~~~~t~~~ei~~ 135 (414)
T COG2195 62 VPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILKATLGADN-IGLAIG-LAVLS----PEHFPLEVLLTGDEEITT 135 (414)
T ss_pred eeEEeeccccccccccccccccccccccccccCCceeeeccCcch-hhhhhH-HhhcC----cccCCceeeeecceEEec
Confidence 56889999999994 333333332 13344555 566533 222221 11221 136789999999999 55
Q ss_pred ccHH
Q 013332 177 GGAK 180 (445)
Q Consensus 177 ~G~~ 180 (445)
.|+.
T Consensus 136 dGa~ 139 (414)
T COG2195 136 DGAT 139 (414)
T ss_pred cCcc
Confidence 6665
No 106
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=26.18 E-value=1.2e+02 Score=22.72 Aligned_cols=30 Identities=13% Similarity=0.187 Sum_probs=25.8
Q ss_pred cEEEEEEEecCChhhHHHHHHHHHhHHHHHHH
Q 013332 286 SVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQ 317 (445)
Q Consensus 286 ~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~ 317 (445)
+|+++|-+|.+++.+...+.+.|.+ .+...
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~--kL~l~ 33 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQ--ALPQQ 33 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHH--HhcCC
Confidence 5899999999999999999988888 76543
No 107
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=24.05 E-value=3e+02 Score=28.74 Aligned_cols=73 Identities=22% Similarity=0.274 Sum_probs=49.6
Q ss_pred CceEEEEEcC--CC-CcEEEEEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEE
Q 013332 93 VTGVVGYIGT--GQ-PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVF 169 (445)
Q Consensus 93 ~~nvia~~~~--~~-~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~ 169 (445)
+.|++|.++. ++ ...+++..-++..- +.. ..++++.+++.++++++.. -+.+||+|++
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~~--------------~~~----n~~~v~l~lal~~~~~~~~-~wsKDii~l~ 63 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDSD--------------GEY----NAGGVALALALARYFRRQS-YWSKDIIFLF 63 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCCC--------------ccc----chhhHHHHHHHHHHhhhch-hhhccEEEEe
Confidence 5789998843 22 26677766544321 100 1357899999999999764 5789999999
Q ss_pred eecCCCCccHHHHHHcc
Q 013332 170 QPAEEGGGGAKKMLDAG 186 (445)
Q Consensus 170 ~~dEEg~~G~~~l~~~~ 186 (445)
+.+| ..|.+..+++.
T Consensus 64 ~~~~--~~g~~awl~~Y 78 (504)
T PF04114_consen 64 TDDE--LAGMQAWLEAY 78 (504)
T ss_pred cCCc--chHHHHHHHHH
Confidence 8654 35788888753
No 108
>TIGR03042 PS_II_psbQ_bact photosystem II protein PsbQ. This protein through the member sll1638 from Synechocystis sp. PCC 6803, was shown to be part of the cyanobacteria photosystem II. It is homologous to (but quite diverged from) the chloroplast PsbQ protein, called oxygen-evolving enhancer protein 3 (OEE3). We designate this cyanobacteria protein PsbQ by homology.
Probab=22.96 E-value=1.2e+02 Score=25.71 Aligned_cols=9 Identities=44% Similarity=0.545 Sum_probs=3.8
Q ss_pred hhHHHHHHH
Q 013332 4 SKLLSLLVT 12 (445)
Q Consensus 4 ~~~~~~~~~ 12 (445)
+++++++++
T Consensus 2 r~~~s~~Lv 10 (142)
T TIGR03042 2 RSLASLLLV 10 (142)
T ss_pred hhHHHHHHH
Confidence 344444433
No 109
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=22.73 E-value=7.6e+02 Score=26.17 Aligned_cols=89 Identities=20% Similarity=0.288 Sum_probs=56.2
Q ss_pred HHHHHHHhCCCCeeecc---------CCceEEEEEcC--CCC-cEEEEEEecccccCCCCCCCccccCCCCccccCcchH
Q 013332 75 LIRAELDQMGIPYKFPV---------AVTGVVGYIGT--GQP-PFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDA 142 (445)
Q Consensus 75 ~l~~~l~~~G~~~~~~~---------~~~nvia~~~~--~~~-p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg 142 (445)
+...++++.|.++.... .+.||.+.++. +++ ..++| +||-+..+ ++ ..+
T Consensus 93 ~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl-----~vP~~~~~--------~~------~~~ 153 (617)
T KOG3566|consen 93 WAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVL-----VVPYGRSS--------GS------NSA 153 (617)
T ss_pred HHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEE-----EEecccCC--------Cc------chh
Confidence 57777777798876522 15799999954 222 45665 45633211 01 135
Q ss_pred HHHHHHHHHHHHHhccccCCceEEEEEeecCCCCccHHHHHHc
Q 013332 143 HVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDA 185 (445)
Q Consensus 143 ~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~l~~~ 185 (445)
+++.+++.++.+++. .-...+|+++++-++ ..|...++++
T Consensus 154 ~v~l~lsla~~f~r~-~yWsKDII~v~~d~~--~~g~~AwLea 193 (617)
T KOG3566|consen 154 SVALLLSLADYFSRW-VYWSKDIIFVFTDGP--ALGLDAWLEA 193 (617)
T ss_pred HHHHHHHHHHHhcCC-eeecccEEEEEeCCc--cccHHHHHHH
Confidence 677777778877764 467899999999663 3466666654
No 110
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=22.60 E-value=3.9e+02 Score=26.04 Aligned_cols=64 Identities=19% Similarity=0.167 Sum_probs=40.6
Q ss_pred cEEEEEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCC
Q 013332 106 PFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG 176 (445)
Q Consensus 106 p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~ 176 (445)
.+|+|.+=.|-|-..-...|.- -++.++|---...+.-.+.+++.+. ..-.+|.++..++|+..
T Consensus 110 iPVV~aavtd~v~a~Lv~~~~~---pg~NvTGvsD~~~v~q~i~lik~~~----Pnak~Igv~Y~p~E~ns 173 (322)
T COG2984 110 IPVVFAAVTDPVGAKLVKSLEQ---PGGNVTGVSDLLPVAQQIELIKALL----PNAKSIGVLYNPGEANS 173 (322)
T ss_pred CCEEEEccCchhhccCCccccC---CCCceeecCCcchHHHHHHHHHHhC----CCCeeEEEEeCCCCccc
Confidence 4577777666665433333432 2456777644456777777776653 33468999999999954
No 111
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=21.23 E-value=1.6e+02 Score=29.75 Aligned_cols=77 Identities=16% Similarity=0.000 Sum_probs=50.9
Q ss_pred CCHHHHHHHHHHHHHhcCCcccc---cCCCCCccchHHHHH-hh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 340 NNKNLHEHFQKVAADMLGVQNIK---ENRPLMGTEDFSFFA-EA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 340 ~d~~l~~~~~~a~~~~~g~~~~~---~~~~~~g~tD~~~~~-~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
+|++.+..+++++++. |.+... .....+|+|=.-.++ +. ++++= +|+.- -.+|++.|-....++..
T Consensus 354 td~~~~a~~~~l~~~~-~Vp~Q~f~~~~d~~~Gstigpi~aa~tGi~tID--iG~~~------LsMHS~rE~~g~~D~~~ 424 (437)
T COG1362 354 TDSEGIALLRKLAQKA-GVPWQVFVLRNDVPCGSTIGPILAARTGIRTID--IGPAL------LSMHSIRELSGSADLYE 424 (437)
T ss_pred cCchHHHHHHHHHHHc-CCceEEEEecccCCCCcccchhHHhhcCCceee--cchhh------hhhccHHHHcchhHHHH
Confidence 4777888899999887 765432 112233444333333 33 77753 45432 34999999999999999
Q ss_pred HHHHHHHHHHH
Q 013332 415 GAALHASLATR 425 (445)
Q Consensus 415 ~~~~~~~~i~~ 425 (445)
+.+.|..+..+
T Consensus 425 ~~~~~~aFf~~ 435 (437)
T COG1362 425 AYKALSAFFEN 435 (437)
T ss_pred HHHHHHHHHhc
Confidence 99998877653
No 112
>PF12046 DUF3529: Protein of unknown function (DUF3529); InterPro: IPR021919 This family of proteins is functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 176 to 190 amino acids in length.
Probab=21.15 E-value=94 Score=27.22 Aligned_cols=59 Identities=19% Similarity=0.032 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHhhcCccccCCCCCchhccccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCC
Q 013332 5 KLLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG 84 (445)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G 84 (445)
.+++.++.+.|++++.-| .+....++..+..+ +-| +..+.++++-|.+||++.|
T Consensus 4 ~~~STl~LtlLl~iGL~f-----------firaS~KdRt~~~~--------------~~s-~~p~~~~~~~l~~yf~~r~ 57 (173)
T PF12046_consen 4 SLYSTLLLTLLLAIGLFF-----------FIRASVKDRTEQVT--------------FES-PQPPDEVLEQLKAYFEQRN 57 (173)
T ss_pred hhhHHHHHHHHHHhHHHH-----------HHHHhccccEEEEE--------------EEc-CCCHHHHHHHHHHHHHhcC
Confidence 355666677777777744 55555555554433 112 2347889999999999999
Q ss_pred CCeee
Q 013332 85 IPYKF 89 (445)
Q Consensus 85 ~~~~~ 89 (445)
+.+..
T Consensus 58 y~v~~ 62 (173)
T PF12046_consen 58 YRVAE 62 (173)
T ss_pred ceecc
Confidence 98864
Done!