Query 013332
Match_columns 445
No_of_seqs 236 out of 1652
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 08:35:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013332.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013332hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xmb_A IAA-amino acid hydrolas 100.0 8.5E-63 2.9E-67 498.2 39.1 393 34-433 12-408 (418)
2 1ysj_A Protein YXEP; M20 famil 100.0 3.2E-60 1.1E-64 477.2 42.1 368 50-429 32-402 (404)
3 3io1_A Aminobenzoyl-glutamate 100.0 8.2E-61 2.8E-65 487.0 37.1 380 37-431 3-436 (445)
4 3pfo_A Putative acetylornithin 100.0 2.6E-55 9E-60 445.7 32.1 370 34-429 12-430 (433)
5 3ram_A HMRA protein; two-domai 100.0 4.7E-54 1.6E-58 430.6 33.7 360 36-431 4-377 (394)
6 1cg2_A Carboxypeptidase G2; me 100.0 3.8E-54 1.3E-58 431.7 29.6 368 33-428 4-391 (393)
7 3isz_A Succinyl-diaminopimelat 100.0 1.2E-52 4E-57 418.4 33.1 357 50-428 3-376 (377)
8 1vgy_A Succinyl-diaminopimelat 100.0 1.3E-52 4.4E-57 420.6 32.7 359 50-429 6-380 (393)
9 3rza_A Tripeptidase; phosphory 100.0 3.7E-52 1.3E-56 417.6 33.8 360 37-429 13-394 (396)
10 3dlj_A Beta-Ala-His dipeptidas 100.0 7.7E-52 2.6E-56 425.7 35.3 378 33-428 10-483 (485)
11 3gb0_A Peptidase T; NP_980509. 100.0 2.9E-51 9.8E-56 408.0 32.3 345 50-426 6-371 (373)
12 3tx8_A Succinyl-diaminopimelat 100.0 9.9E-52 3.4E-56 410.8 28.3 342 50-424 13-368 (369)
13 2zog_A Cytosolic non-specific 100.0 1.1E-50 3.6E-55 417.0 31.7 374 36-429 8-477 (479)
14 2f7v_A Aectylcitrulline deacet 100.0 2E-50 6.8E-55 401.3 30.4 338 43-424 4-366 (369)
15 2pok_A Peptidase, M20/M25/M40 100.0 7.6E-51 2.6E-55 418.1 28.2 371 36-426 31-480 (481)
16 3pfe_A Succinyl-diaminopimelat 100.0 3E-50 1E-54 412.4 31.3 375 36-429 5-471 (472)
17 3ct9_A Acetylornithine deacety 100.0 8.6E-51 2.9E-55 401.9 23.9 328 50-426 11-354 (356)
18 2rb7_A Peptidase, M20/M25/M40 100.0 1.9E-49 6.6E-54 393.3 27.6 336 50-429 6-361 (364)
19 3khx_A Putative dipeptidase sa 100.0 2.5E-49 8.4E-54 407.1 28.6 361 34-429 20-491 (492)
20 3ife_A Peptidase T; metallopep 100.0 1.3E-48 4.6E-53 396.2 30.9 346 50-428 27-432 (434)
21 1fno_A Peptidase T; metallo pe 100.0 1.8E-47 6.1E-52 386.2 29.9 347 50-430 2-408 (417)
22 1z2l_A Allantoate amidohydrola 100.0 9.6E-47 3.3E-51 381.6 32.3 352 42-429 3-412 (423)
23 3n5f_A L-carbamoylase, N-carba 100.0 9.3E-46 3.2E-50 372.5 34.7 343 50-427 5-406 (408)
24 2v8h_A Beta-alanine synthase; 100.0 2.1E-46 7.2E-51 383.9 29.0 346 50-429 32-448 (474)
25 2qyv_A XAA-His dipeptidase; YP 100.0 1.1E-45 3.9E-50 380.1 31.5 346 50-427 11-485 (487)
26 3mru_A Aminoacyl-histidine dip 100.0 9.8E-46 3.3E-50 380.0 28.8 344 50-427 14-487 (490)
27 1lfw_A PEPV; hydrolase, dipept 100.0 4.2E-45 1.4E-49 374.5 30.8 360 39-430 5-468 (470)
28 3t68_A Succinyl-diaminopimelat 100.0 1.2E-33 4E-38 268.1 19.1 248 50-428 6-268 (268)
29 4h2k_A Succinyl-diaminopimelat 100.0 4.7E-32 1.6E-36 257.1 21.7 249 50-428 6-268 (269)
30 1q7l_A Aminoacylase-1; catalys 99.9 1.3E-26 4.4E-31 209.5 13.8 170 50-224 10-198 (198)
31 2fvg_A Endoglucanase; TM1049, 99.9 1.7E-25 5.9E-30 219.1 13.8 248 55-428 3-335 (340)
32 2wzn_A TET3, 354AA long hypoth 99.9 7E-28 2.4E-32 234.6 -9.9 323 53-427 12-348 (354)
33 1vhe_A Aminopeptidase/glucanas 99.9 1.9E-23 6.5E-28 207.1 19.6 256 50-429 7-355 (373)
34 2wyr_A Cobalt-activated peptid 99.9 3.3E-23 1.1E-27 202.3 17.9 239 52-425 4-331 (332)
35 1y0y_A FRV operon protein FRVX 99.9 8.5E-22 2.9E-26 193.9 19.2 247 52-428 8-350 (353)
36 2gre_A Deblocking aminopeptida 99.9 1.5E-21 5E-26 191.8 18.2 140 50-198 6-241 (349)
37 1vho_A Endoglucanase; structur 99.9 1.7E-21 5.9E-26 191.2 17.4 243 51-429 6-337 (346)
38 3cpx_A Aminopeptidase, M42 fam 99.8 3.6E-21 1.2E-25 186.6 12.5 238 48-425 15-320 (321)
39 1ylo_A Hypothetical protein SF 99.8 1E-19 3.5E-24 178.7 22.2 249 54-427 7-337 (348)
40 1tkj_A Aminopeptidase, SGAP; d 99.7 1.7E-17 5.7E-22 158.1 11.0 131 50-197 7-159 (284)
41 1rtq_A Bacterial leucyl aminop 99.7 4.9E-17 1.7E-21 156.0 12.4 136 37-185 11-164 (299)
42 3kl9_A PEPA, glutamyl aminopep 99.7 1.5E-15 5.2E-20 148.3 21.9 246 51-426 4-344 (355)
43 3tc8_A Leucine aminopeptidase; 99.6 5.1E-15 1.8E-19 142.0 17.4 131 50-186 25-186 (309)
44 3gux_A Putative Zn-dependent e 99.6 1.3E-14 4.6E-19 139.2 15.7 131 50-186 27-189 (314)
45 2vpu_A TET3, 354AA long hypoth 99.6 4.9E-14 1.7E-18 137.4 19.4 66 52-119 11-77 (354)
46 2afw_A Glutaminyl-peptide cycl 99.5 3.4E-14 1.2E-18 137.9 12.6 135 37-185 22-190 (329)
47 3isx_A Endoglucanase; TM1050, 99.5 2.9E-13 1E-17 131.0 16.6 67 50-118 11-77 (343)
48 4fuu_A Leucine aminopeptidase; 99.2 1.8E-10 6.3E-15 110.6 17.1 131 50-186 25-187 (309)
49 3pb6_X Glutaminyl-peptide cycl 99.2 3.9E-11 1.3E-15 115.6 11.4 124 50-185 39-194 (330)
50 4f9u_A CG32412; alpha/beta hyd 99.2 2.2E-10 7.5E-15 110.3 14.2 123 50-185 11-163 (312)
51 4fai_A CG5976, isoform B; alph 99.2 6.4E-10 2.2E-14 107.7 16.1 133 38-185 27-187 (330)
52 1q7l_B Aminoacylase-1; catalys 99.1 8.3E-11 2.8E-15 90.9 5.9 77 343-429 2-81 (88)
53 2ek8_A Aminopeptidase; metallo 98.7 3.7E-08 1.3E-12 98.6 10.1 105 61-185 163-285 (421)
54 3iib_A Peptidase M28; YP_92679 98.7 5.9E-08 2E-12 97.7 9.9 98 71-186 204-317 (444)
55 3fed_A Glutamate carboxypeptid 98.0 1.3E-05 4.3E-10 84.6 8.4 78 93-186 312-395 (707)
56 3kas_A Transferrin receptor pr 97.9 1.9E-05 6.6E-10 82.3 7.9 78 93-186 266-350 (640)
57 3vat_A Dnpep, aspartyl aminope 93.7 0.11 3.8E-06 52.1 7.1 80 340-428 404-488 (496)
58 2ijz_A Probable M18-family ami 93.3 0.047 1.6E-06 54.0 3.6 76 340-424 343-423 (428)
59 2glf_A Probable M18-family ami 92.8 0.15 5E-06 50.7 6.3 77 340-425 368-449 (450)
60 3k9t_A Putative peptidase; str 92.0 0.74 2.5E-05 44.8 9.8 70 95-186 167-238 (435)
61 1y7e_A Probable M18-family ami 91.7 0.08 2.7E-06 52.8 2.9 75 340-423 377-456 (458)
62 4eme_A M18 aspartyl aminopepti 90.9 0.37 1.3E-05 48.9 6.7 81 340-428 472-562 (571)
63 1tkj_A Aminopeptidase, SGAP; d 87.3 2.4 8.1E-05 39.2 9.2 90 340-431 174-280 (284)
64 2hc9_A Leucine aminopeptidase 85.8 12 0.0004 37.2 13.4 118 50-174 167-307 (491)
65 2glj_A Probable M18-family ami 85.5 0.33 1.1E-05 48.4 2.2 75 340-423 380-459 (461)
66 4efd_A Aminopeptidase; structu 81.4 23 0.00079 35.2 13.4 111 50-174 204-345 (522)
67 3h8g_F Cytosol aminopeptidase; 81.3 17 0.00058 36.2 12.5 113 48-174 178-322 (497)
68 1gyt_A Cytosol aminopeptidase; 80.4 19 0.00066 35.9 12.7 113 48-174 179-325 (503)
69 3jru_B Probable cytosol aminop 80.1 20 0.00067 35.6 12.5 113 48-174 174-317 (490)
70 3ij3_A Cytosol aminopeptidase; 78.8 22 0.00076 35.0 12.2 118 50-174 167-305 (482)
71 1lam_A Leucine aminopeptidase; 78.1 5.4 0.00019 39.6 7.8 119 49-174 160-305 (484)
72 2ijz_A Probable M18-family ami 77.2 0.62 2.1E-05 46.0 0.8 61 58-118 7-86 (428)
73 3iib_A Peptidase M28; YP_92679 76.8 3.1 0.00011 41.2 5.8 82 344-432 351-436 (444)
74 3kzw_A Cytosol aminopeptidase; 76.5 25 0.00086 35.0 12.0 113 48-174 195-338 (515)
75 1rtq_A Bacterial leucyl aminop 76.2 11 0.00036 34.9 9.1 90 341-434 198-294 (299)
76 3pei_A Cytosol aminopeptidase; 76.1 22 0.00075 35.3 11.4 113 48-174 162-306 (486)
77 2glf_A Probable M18-family ami 75.9 5.2 0.00018 39.5 7.1 53 66-118 30-97 (450)
78 3kr4_A M17 leucyl aminopeptida 73.5 52 0.0018 32.8 13.4 116 46-174 201-349 (528)
79 1y7e_A Probable M18-family ami 70.9 2.6 9E-05 41.8 3.5 50 67-118 33-100 (458)
80 3fed_A Glutamate carboxypeptid 66.0 9.3 0.00032 40.1 6.6 53 33-89 12-67 (707)
81 2jvf_A De novo protein M7; tet 64.5 33 0.0011 23.9 7.3 63 285-360 15-80 (96)
82 2ek8_A Aminopeptidase; metallo 59.6 25 0.00084 34.2 8.1 74 348-431 327-404 (421)
83 3mru_A Aminoacyl-histidine dip 48.0 25 0.00086 35.0 6.1 44 266-317 347-390 (490)
84 4f9u_A CG32412; alpha/beta hyd 42.7 46 0.0016 30.7 6.7 61 368-434 241-305 (312)
85 2glj_A Probable M18-family ami 42.5 13 0.00046 36.8 2.9 47 70-117 38-105 (461)
86 3tc8_A Leucine aminopeptidase; 38.2 88 0.003 28.9 7.8 81 343-425 221-308 (309)
87 3kas_A Transferrin receptor pr 27.5 38 0.0013 35.0 3.5 50 34-87 6-60 (640)
88 4fai_A CG5976, isoform B; alph 24.4 90 0.0031 29.1 5.3 56 370-431 268-327 (330)
No 1
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=8.5e-63 Score=498.16 Aligned_cols=393 Identities=66% Similarity=1.099 Sum_probs=322.0
Q ss_pred ccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEe
Q 013332 34 QIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRAD 113 (445)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H 113 (445)
...+++.+++++++.++++++++++|++|||+|++|.++++||.++|+++|++++...+++|++++++++++|+|+|++|
T Consensus 12 ~~~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH 91 (418)
T 1xmb_A 12 QIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRAD 91 (418)
T ss_dssp ----CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEE
T ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEec
Confidence 45667888887743337899999999999999999999999999999999999987655789999996542289999999
Q ss_pred cccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCCccHHHHHHccCCCCcce
Q 013332 114 MDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEA 193 (445)
Q Consensus 114 ~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~~d~ 193 (445)
|||||.++...|||...+||++||||+|++++++|+|++.|++.+..++++|.|+|+++||++.|++++++++.++++|+
T Consensus 92 ~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~ 171 (418)
T 1xmb_A 92 MDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEA 171 (418)
T ss_dssp CCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEE
T ss_pred ccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCE
Confidence 99999988778899877899999999999999999999999998878999999999999997789999999887767899
Q ss_pred eEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEE
Q 013332 194 IFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAK 273 (445)
Q Consensus 194 ~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~ 273 (445)
++++|.++++|+|.+.++++.+++|..+++|+++|+++|||.|+.|+|||..+++++.+|+.+..+..++...++++++.
T Consensus 172 ~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~ 251 (418)
T 1xmb_A 172 IFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSK 251 (418)
T ss_dssp EEEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEE
T ss_pred EEEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEE
Confidence 99988776778887666667788999999999999999999999999999999999999998754444455567999999
Q ss_pred EEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCC----CCcccCCHHHHHHHH
Q 013332 274 FEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSF----YPVTVNNKNLHEHFQ 349 (445)
Q Consensus 274 i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~d~~l~~~~~ 349 (445)
|+||.+.|+||++|++++|+|+.+ +.+++.++|++ +++..+..+++++++++ ... +|++.+|+++++.++
T Consensus 252 i~gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~--~~~~~a~~~g~~~~~~~--~~~~~~p~~~~~~d~~l~~~~~ 325 (418)
T 1xmb_A 252 VNGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKE--VITKQAAVHRCNASVNL--TPNGREPMPPTVNNKDLYKQFK 325 (418)
T ss_dssp EC--------CCEEEEEEEEEESS--CHHHHHHHHHH--HHHHHHHHTTEEEEEES--SGGGCCCBCCEEECHHHHHHHH
T ss_pred EEecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHH--HHHHHHHHhCCeEEEEE--ccCCcccCCCccCCHHHHHHHH
Confidence 999999999999999999999999 89999999999 99888777888888876 444 777888999999999
Q ss_pred HHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 350 KVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 350 ~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
+++++++|.+++......+|++|+++|.+.+|++++++|+.+.. |....+|++||++++++|..++++|+.++.+++.+
T Consensus 326 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~-~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 404 (418)
T 1xmb_A 326 KVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKE 404 (418)
T ss_dssp HHHHHHHCGGGEEECCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcceeccCCCCCcchHHHHHHHCCEEEEEEeCCCCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHhc
Confidence 99999778865322357889999999988899987777865411 12367999999999999999999999999999987
Q ss_pred cCCC
Q 013332 430 NQPK 433 (445)
Q Consensus 430 ~~~~ 433 (445)
++.+
T Consensus 405 ~~~~ 408 (418)
T 1xmb_A 405 KASK 408 (418)
T ss_dssp HHC-
T ss_pred CCCC
Confidence 7664
No 2
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=3.2e-60 Score=477.24 Aligned_cols=368 Identities=39% Similarity=0.635 Sum_probs=309.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc-CCceEEEEEcCC-CCcEEEEEEecccccCCCCCCCcc
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-AVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEH 127 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~-~~~nvia~~~~~-~~p~i~l~~H~DtVp~~~~~~w~~ 127 (445)
+++++++++|++|||+|++|.++++||.++|+++|++++... +++|++++++++ ++|+|+|+|||||||.++...+||
T Consensus 32 ~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~~~Pf 111 (404)
T 1ysj_A 32 TRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNLPF 111 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCCCCTT
T ss_pred HHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCCCCCc
Confidence 789999999999999999999999999999999999986543 467999999654 469999999999999986555567
Q ss_pred ccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCCccHHHHHHccCCCCcceeEEecccCCCCCCc
Q 013332 128 KSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGT 207 (445)
Q Consensus 128 ~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~ 207 (445)
....||++||||+|++++++|++++.|++.+..++++|.|+|+++||++.|++++++++.++++|+++++|.+++.+.|.
T Consensus 112 ~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~~~g~ 191 (404)
T 1ysj_A 112 ASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGT 191 (404)
T ss_dssp CCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTSCTTE
T ss_pred ccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCCCCce
Confidence 76678999999999999999999999999877899999999999999888999999988777789999987766666677
Q ss_pred eeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcE
Q 013332 208 VASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSV 287 (445)
Q Consensus 208 ~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a 287 (445)
+.+..|..++|..+++|+++|+++|||.|+.|.|||..+++++.+|+.+..+..++...++++++.|+||.+.|+||++|
T Consensus 192 v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a 271 (404)
T 1ysj_A 192 IGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVIPDQA 271 (404)
T ss_dssp EEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEECSCSSSCCSEE
T ss_pred EEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcCCCCceecCce
Confidence 65555555789999999999999999999999999999999999998775444455567899999999999999999999
Q ss_pred EEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHh-cCCcccccCCC
Q 013332 288 TIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADM-LGVQNIKENRP 366 (445)
Q Consensus 288 ~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~-~g~~~~~~~~~ 366 (445)
++++|+|+.+.++.+.+.++|++ ++++.+..+++++++++ ...+|++.+|+++++.++++++++ +|.++. . .
T Consensus 272 ~~~~diR~~~~~~~~~i~~~i~~--~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~g~g~~~~--~-~ 344 (404)
T 1ysj_A 272 EMEGTVRTFQKEARQAVPEHMRR--VAEGIAAGYGAQAEFKW--FPYLPSVQNDGTFLNAASEAAARLGYQTVHA--E-Q 344 (404)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHH--HHHHHHHHTTCEEEEEE--EEEECCEEECGGGHHHHHHHHHHTTCEEEEC--C-C
T ss_pred EEEEEEecCCHHHHHHHHHHHHH--HHHHHHHHhCCEEEEEE--ecCCCCccCCHHHHHHHHHHHHHhcCCcccc--c-c
Confidence 99999999999999999999999 99888777888888876 557788888888999999999998 776553 2 6
Q ss_pred CCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 367 LMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 367 ~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
.+|++|+++|.+.+|++++++| ||+...+|++||+++++++.+++++|+.++.+++..
T Consensus 345 ~~g~tD~~~~~~~~p~~~~~~G-----~~~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~ 402 (404)
T 1ysj_A 345 SPGGEDFALYQEKIPGFFVWMG-----TNGTEEWHHPAFTLDEEALTVASQYFAELAVIVLET 402 (404)
T ss_dssp BSSCCTHHHHHTTSCEEEEEEE-----CCCSSCTTCTTCCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHCCeEEEEEc-----CCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 8899999999988999877788 454467999999999999999999999999999863
No 3
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=8.2e-61 Score=487.00 Aligned_cols=380 Identities=26% Similarity=0.402 Sum_probs=305.5
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc-------------------------
Q 013332 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------------------------- 91 (445)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~------------------------- 91 (445)
.++.+++++.+ +++++++++|+++||++++|.++++||+++|+++||+++...
T Consensus 3 ~~~~~~~~~~~--~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (445)
T 3io1_A 3 LQLDEYLRQLA--PSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAR 80 (445)
T ss_dssp CCHHHHHHTTH--HHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHH--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhc
Confidence 46788888877 999999999999999999999999999999999999987631
Q ss_pred --------------CCceEEEEEcCC-CCcEEEEEEecccccCCCCCCCcc-------ccCCCCccccCcchHHHHHHHH
Q 013332 92 --------------AVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEH-------KSKVPGKMHACGHDAHVAMLLG 149 (445)
Q Consensus 92 --------------~~~nvia~~~~~-~~p~i~l~~H~DtVp~~~~~~w~~-------~~~~~g~l~GrG~kg~~aa~l~ 149 (445)
+++||+|+++++ ++|+|+|++||||||+++..+|++ .+..+|++||||+|++++++|+
T Consensus 81 ~~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~ 160 (445)
T 3io1_A 81 EQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLG 160 (445)
T ss_dssp TTTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHH
T ss_pred cccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHH
Confidence 579999999765 479999999999999988888953 2466899999999999999999
Q ss_pred HHHHHHhccccCCceEEEEEeecCCCCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEec
Q 013332 150 AAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGK 229 (445)
Q Consensus 150 a~~~l~~~~~~l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~ 229 (445)
+++.|++.+..++++|.|+|++|||++.|++.|+++|.++++|+++++|+.+..|.|.+.+..+.. .+..+++|+++|+
T Consensus 161 aa~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~-~a~~~~~i~v~Gk 239 (445)
T 3io1_A 161 LAHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNF-MATTKFDVQFSGV 239 (445)
T ss_dssp HHHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCB-CEEEEEEEEEECC
T ss_pred HHHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCe-eEEEEEEEEEEee
Confidence 999999888789999999999999988999999999988889999999987666778775543221 1347999999999
Q ss_pred CCCC-CCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHH
Q 013332 230 GGHA-AIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRI 308 (445)
Q Consensus 230 ~~Ha-s~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i 308 (445)
++|+ +.|+.|+|||..+++++..|+.+. +..+ +..+++++.|+||.+.|+||++|++++|+|+.+.++.+.+.++|
T Consensus 240 ~~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i 316 (445)
T 3io1_A 240 AAHAGGKPEDGRNALLAAAQAALGLHAIP-PHSA--GASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERA 316 (445)
T ss_dssp CSSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT--BCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC--CCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHH
Confidence 9998 689999999999999999999873 2222 35789999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccC-CCCCccchHHHHHhhcC-----e
Q 013332 309 EEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKEN-RPLMGTEDFSFFAEAIP-----G 382 (445)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~-~~~~g~tD~~~~~~~ip-----~ 382 (445)
++ +++..+..+++++++++ ...+|++.+|+++++.+++++++++|.+++... ...+|++|+++|.+.+| .
T Consensus 317 ~~--~~~~~a~~~g~~~~i~~--~~~~~~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~~D~~~~~~~~P~~gg~~ 392 (445)
T 3io1_A 317 QH--VVAGAAAMYEARYELRM--MGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLMMARVQARGGLA 392 (445)
T ss_dssp HH--HHHHHHHHTTCEEEEEE--EEEECCCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBCCTHHHHHHHHHHTTCEE
T ss_pred HH--HHHHHHHHhCCeEEEEE--ecCCCCcCCCHHHHHHHHHHHHHhcCCccceecCCCCccHHHHHHHHHHhcccCCce
Confidence 99 99998888899998887 567888889999999999999998776543222 23589999999998876 5
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhcC
Q 013332 383 YFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLENQ 431 (445)
Q Consensus 383 ~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~~~ 431 (445)
.++++|+ |....+|++||++++++|..++++|++++.+++.+++
T Consensus 393 ~~~~~G~-----~~~~~~H~~~E~i~~~~l~~g~~~~~~~~~~~~~~~~ 436 (445)
T 3io1_A 393 SYMIFGT-----ELSAGHHNEKFDFDESVMAVAVETLARVALNFPWQRG 436 (445)
T ss_dssp EEEEEEE-----EC-----------CCCHHHHHHHHHHHHHHTCCSCC-
T ss_pred EEEEEeC-----CCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence 5667884 3345799999999999999999999999999987665
No 4
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.6e-55 Score=445.72 Aligned_cols=370 Identities=14% Similarity=0.130 Sum_probs=311.2
Q ss_pred ccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec---------------------cC
Q 013332 34 QIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP---------------------VA 92 (445)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~---------------------~~ 92 (445)
...+++++++++++ +++++++++|++|||+|++|.++++||+++|+++|++++.. ++
T Consensus 12 ~~~~~i~~~i~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (433)
T 3pfo_A 12 AITQSLRAAVDRNF--NDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAG 89 (433)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGG
T ss_pred HHHHHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCC
Confidence 45678999999988 99999999999999999999999999999999999998752 45
Q ss_pred CceEEEEEcCC-CCcEEEEEEecccccCCCCCCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCce
Q 013332 93 VTGVVGYIGTG-QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGT 164 (445)
Q Consensus 93 ~~nvia~~~~~-~~p~i~l~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~ 164 (445)
++||+++++++ ++|+|+|+|||||||.++...|. |. .++||++||||+ |++++++|++++.|++.+.+++++
T Consensus 90 ~~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 169 (433)
T 3pfo_A 90 SMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDAR 169 (433)
T ss_dssp CEEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred CcEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCcc
Confidence 78999999654 46899999999999998877885 43 367899999998 899999999999999988788999
Q ss_pred EEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCC-ceeeccCcccccceEEEEEEEecCCCCCCCCCCCCH
Q 013332 165 IVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVG-TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDP 242 (445)
Q Consensus 165 i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g-~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NA 242 (445)
|.|+|+++|| ++.|++.+++++. ++|++++.+ |++ .+. .+++|..+++|+++|+++|||.|+.|+||
T Consensus 170 v~~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~e-----p~~~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nA 238 (433)
T 3pfo_A 170 VHVQTVTEEESTGNGALSTLMRGY--RADACLIPE-----PTGHTLT----RAQVGAVWFRLRVRGTPVHVAYSETGTSA 238 (433)
T ss_dssp EEEEEESCTTTTCHHHHHHHHTTC--CCSEEEECC-----CCSSCEE----EEECEEEEEEEEEECCCCBGGGGGGSCCH
T ss_pred EEEEEEecCccCChhHHHHHhcCC--CCCEEEEeC-----CCCCceE----EecceEEEEEEEEEcCCCccCCCCcCcCH
Confidence 9999999999 5689999998774 578888754 343 232 35789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccc-----CCC-----CCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHH
Q 013332 243 IVAASNVIVSLQHLVSRE-----ADP-----LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQ 312 (445)
Q Consensus 243 i~~~~~~i~~l~~~~~~~-----~~~-----~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~ 312 (445)
+..+++++..|+.+..+. .++ ....+++++.|+||.+.|+||++|++.+++|+.|+++.+++.++|++
T Consensus 239 i~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~-- 316 (433)
T 3pfo_A 239 ILSAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEK-- 316 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECSCTTBCCCEEEEEEEEEECTTCCHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEECCCCCcccCcEEEEEEEEecCCCCCHHHHHHHHHH--
Confidence 999999999998875321 122 23468999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh----CCeEEEEecccCCCCccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh--cCeEE
Q 013332 313 VVMKQASVQ----RCNATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA--IPGYF 384 (445)
Q Consensus 313 ~~~~~~~~~----~~~~~i~~~~~~~~~~~~--~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~--ip~~~ 384 (445)
++++.+..+ ++++++++. ...+|++. .|+++++.+.+++++.+|.++. ....+|++|+++|.+. +|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~v~~~-~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~~--~~~~~g~~D~~~~~~~~giP~v~ 393 (433)
T 3pfo_A 317 CLADAQATDSFLSENPAELVWS-GFQADPAVCEPGGVAEDVLTAAHKAAFNAPLD--ARLSTAVNDTRYYSVDYGIPALC 393 (433)
T ss_dssp HHHHHHTTCHHHHHSCCEEEEE-EEEECCEECCTTCHHHHHHHHHHHHHHSSCCC--EEEESSCCTHHHHHHTTCCCEEE
T ss_pred HHHHHhhhCcccccCCeEEEEe-cccCCcccCCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeeccHHHHHhhCCCCEEE
Confidence 998876543 244566552 13455553 4778999999999997798653 3457899999999874 99874
Q ss_pred EEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 385 YYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 385 ~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
|| || ...+|++||++++++|..++++|+.++.+++..
T Consensus 394 --~G-----p~-~~~~H~~~E~i~~~~l~~~~~~~~~~i~~~~~~ 430 (433)
T 3pfo_A 394 --YG-----PY-GQGPHAFDERIDLESLRKTTLSIALFVAEWCGL 430 (433)
T ss_dssp --CC-----CC-EECTTSTTCEEEHHHHHHHHHHHHHHHHHHHCE
T ss_pred --EC-----CC-CccCCCCCceEEHHHHHHHHHHHHHHHHHHhcc
Confidence 67 44 357999999999999999999999999999863
No 5
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=4.7e-54 Score=430.58 Aligned_cols=360 Identities=23% Similarity=0.334 Sum_probs=310.7
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccC--CceEEEEEcCC-CCcEEEEEE
Q 013332 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVA--VTGVVGYIGTG-QPPFVALRA 112 (445)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~--~~nvia~~~~~-~~p~i~l~~ 112 (445)
.+++.+++++.+ +++++++++|++|||+|++|.++++||.++|+++|+++++... ++|++|+++++ ++|+|+|.+
T Consensus 4 ~~~i~~~~~~~~--~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~a 81 (394)
T 3ram_A 4 KQQILDYIETNK--YSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLA 81 (394)
T ss_dssp HHHHHHHHHHTH--HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEE
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEE
Confidence 467888888877 9999999999999999999999999999999999999887533 57999999764 469999999
Q ss_pred ecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCC--ccHH-HHHHccCCC
Q 013332 113 DMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG--GGAK-KMLDAGALE 189 (445)
Q Consensus 113 H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~--~G~~-~l~~~~~~~ 189 (445)
|||||| |++||||+|+..+++|++++.|++.+..++++|.|+|+++||++ .|++ .|++.|.++
T Consensus 82 h~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~ 147 (394)
T 3ram_A 82 EYDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVID 147 (394)
T ss_dssp CCCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGG
T ss_pred ecccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCcc
Confidence 999999 56899999999999999999999887789999999999999953 7999 999999887
Q ss_pred CcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCee
Q 013332 190 NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQV 268 (445)
Q Consensus 190 ~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t 268 (445)
++|+++++|+.++. ..+..++|..+++|+++|+++|+| .|+.|+|||..+++++..|+.+.... + ...+
T Consensus 148 ~~d~~~~~h~~~~~-------~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~--~-~~~~ 217 (394)
T 3ram_A 148 QIDIALMIHPGNET-------YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI--K-KDQR 217 (394)
T ss_dssp GCSEEECCEEESSB-------BCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS--C-TTCE
T ss_pred cCCEEEEECCcccc-------CCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC--C-CCCe
Confidence 88999998875431 234567899999999999999999 99999999999999999999874321 1 2356
Q ss_pred EEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHH
Q 013332 269 LTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHF 348 (445)
Q Consensus 269 ~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~ 348 (445)
++++.++||.+.|+||++|++.+|+|+.+.++.+.+.++|++ ++++.+..+++++++++. ...+|++.+|+++++.+
T Consensus 218 ~~~~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~--~~~~~a~~~g~~~ei~~~-~~~~~~~~~d~~l~~~~ 294 (394)
T 3ram_A 218 VHGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQ--IARGAAIQTGCDYEFGPI-QNGVNEFIKTPKLDDLF 294 (394)
T ss_dssp EEEEEEEBCSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHH--HHHHHHHHHTCEEEEEES-SCCBCCCCCCHHHHHHH
T ss_pred eEEEEEECCCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHH--HHHHHHHHhCCeEEEEEe-cCCCCCccCCHHHHHHH
Confidence 788899999999999999999999999999999999999999 999988888999888762 35778888999999999
Q ss_pred HHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCC-------CCCCchHHHHHHHHH
Q 013332 349 QKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFR-------VNEDALPYGAALHAS 421 (445)
Q Consensus 349 ~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~-------v~i~~l~~~~~~~~~ 421 (445)
+++++++ | .++......+|++|+++|++.+|++++++|... + ....|+| |+ ++.+.+..++++|+.
T Consensus 295 ~~a~~~~-G-~~~~~~~~~~g~~D~~~~~~~~P~~~~~~g~~~---~-~~~~H~~-ef~~~~~~~~~~~~l~~g~~~la~ 367 (394)
T 3ram_A 295 AKYAEEV-G-EAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIGS---R-NLVGHTH-RFREAAASVHGDEALIKGAKIMAL 367 (394)
T ss_dssp HHHHHHT-T-CCBCCSCCCCBCCTHHHHTTTSCBCCCEEECSC---T-TCCTTSH-HHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-C-cccccCCCCcccccHHHHHHHhchheEEeeecC---C-CCCCCCH-HHHhccCCCccHHHHHHHHHHHHH
Confidence 9999985 8 443223568899999999988999877777643 2 1468999 66 489999999999999
Q ss_pred HHHHHHhhcC
Q 013332 422 LATRYLLENQ 431 (445)
Q Consensus 422 ~i~~l~~~~~ 431 (445)
++.+++.+++
T Consensus 368 ~~~~~l~~~~ 377 (394)
T 3ram_A 368 MGLELITNQD 377 (394)
T ss_dssp HHHHHHHCHH
T ss_pred HHHHHhcCHH
Confidence 9999998764
No 6
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=3.8e-54 Score=431.71 Aligned_cols=368 Identities=18% Similarity=0.181 Sum_probs=307.4
Q ss_pred cccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcch---HHHHHHHHHHHHhCCCCeeecc-----CCceEEEEEcCCC
Q 013332 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFPV-----AVTGVVGYIGTGQ 104 (445)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E---~~~a~~l~~~l~~~G~~~~~~~-----~~~nvia~~~~~~ 104 (445)
+...+++.++++.++ +++++++++|++|||+|++| .++++||+++|+++|++++... .++|+++++++..
T Consensus 4 ~~~~~~~~~~~~~~~--~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~ 81 (393)
T 1cg2_A 4 QKRDNVLFQAATDEQ--PAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG 81 (393)
T ss_dssp CCCCHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS
T ss_pred cchhhHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC
Confidence 467788999999887 99999999999999999876 6899999999999999987643 2469999997543
Q ss_pred CcEEEEEEecccccCCC-CCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccH
Q 013332 105 PPFVALRADMDALAMEE-SVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGA 179 (445)
Q Consensus 105 ~p~i~l~~H~DtVp~~~-~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~ 179 (445)
+|+|+|++||||||..+ ...|||. ++||++||||+ |++++++|++++.|++.+..++++|.|+|+++|| ++.|+
T Consensus 82 ~~~i~l~aH~D~vp~~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~ 160 (393)
T 1cg2_A 82 GKNLLLMSHMDTVYLKGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGS 160 (393)
T ss_dssp CCCEEEEEECCBSCCTTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTT
T ss_pred CceEEEEEecCcCCCCCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccH
Confidence 58999999999998643 3457887 57899999997 7999999999999999887788899999999999 56899
Q ss_pred HHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhc
Q 013332 180 KKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVS 258 (445)
Q Consensus 180 ~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~~g~NAi~~~~~~i~~l~~~~~ 258 (445)
+.+++++. .++|+++++++.. .+.+.+. .+++|..+++|+++|+++||| .|+.|.|||..+++++..|+.+..
T Consensus 161 ~~~~~~~~-~~~d~~i~~e~~~-~~~~~i~----~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~ 234 (393)
T 1cg2_A 161 RDLIQEEA-KLADYVLSFEPTS-AGDEKLS----LGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDD 234 (393)
T ss_dssp HHHHHHHH-HHCSEEEECCCEE-TTSCEEE----SEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCB
T ss_pred HHHHHHHh-hcCCEEEEeCCCC-CCCCcEE----EeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhC
Confidence 99988643 3578888876421 0334332 246799999999999999997 799999999999999999988742
Q ss_pred ccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc
Q 013332 259 READPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT 338 (445)
Q Consensus 259 ~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 338 (445)
+....+++++.|+||.+.|+||++|++.+|+|+++.++.+.+.++|++ ++++ +...++++++++ ...+|++
T Consensus 235 ----~~~~~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~--~~~~-~~~~~~~~~~~~--~~~~~~~ 305 (393)
T 1cg2_A 235 ----KAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEE--RAQQ-KKLPEADVKVIV--TRGRPAF 305 (393)
T ss_dssp ----TTTTEEEEEEEEEECSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHH--HHTS-CSSTTCEEEEEE--EECSCCE
T ss_pred ----cccCceEEEEEEeCCCCCCEECcccEEEEEEeeCChhhHHHHHHHHHH--HHhc-ccCCCcEEEEEe--ccccCCc
Confidence 335689999999999999999999999999999999999999999999 8876 234577777776 5567777
Q ss_pred cCC---HHHHHHHHHHHHHhcCCcccccCCC-CCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCC-CCCCCCCCch
Q 013332 339 VNN---KNLHEHFQKVAADMLGVQNIKENRP-LMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHS-PYFRVNEDAL 412 (445)
Q Consensus 339 ~~d---~~l~~~~~~a~~~~~g~~~~~~~~~-~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~-~~E~v~i~~l 412 (445)
.++ +++++.+++++++. |.++. ... .+|++|+++|... +|+++ ++|+.. ..+|+ +||++++++|
T Consensus 306 ~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~~g~tD~~~~~~~giP~~~-~~G~~~------~~~H~~~~E~i~~~~l 375 (393)
T 1cg2_A 306 NAGEGGKKLVDKAVAYYKEA-GGTLG--VEERTGGGTDAAYAALSGKPVIE-SLGLPG------FGYHSDKAEYVDISAI 375 (393)
T ss_dssp ECHHHHHHHHHHHHHHHHHT-TCCCE--EESCBSCCCTHHHHGGGSCCEEC-CCSCEE------ECTTSSSCCEEEGGGH
T ss_pred cCCcchHHHHHHHHHHHHHh-CCCCc--cccCCCcccHHHHHHhCCCCEEE-eCCCCC------CCccCCCcceEEehhH
Confidence 553 67999999999875 87653 345 7899999999988 89863 567431 45899 9999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 013332 413 PYGAALHASLATRYLL 428 (445)
Q Consensus 413 ~~~~~~~~~~i~~l~~ 428 (445)
..++++|+.++.+++.
T Consensus 376 ~~~~~~~~~~~~~l~~ 391 (393)
T 1cg2_A 376 PRRLYMAARLIMDLGA 391 (393)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999875
No 7
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=1.2e-52 Score=418.45 Aligned_cols=357 Identities=18% Similarity=0.218 Sum_probs=286.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec--cCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCc-
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE- 126 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~- 126 (445)
+++++++++|+++||+|++|.++++||+++|+++|++++.. ++.+|++++++ .++|+|+|++||||||.++...|.
T Consensus 3 ~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g-~~~~~i~l~aH~D~vp~~~~~~w~~ 81 (377)
T 3isz_A 3 EKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWSS 81 (377)
T ss_dssp HHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEE-SSSCEEEEEEECCBCCCCCGGGCSS
T ss_pred hHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeC-CCCCEEEEeccccccCCCCcccCCC
Confidence 67899999999999999999999999999999999998852 35789999984 346999999999999998877885
Q ss_pred --cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCC--ccHHHHHHccCC--CCcceeEE
Q 013332 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG--GGAKKMLDAGAL--ENVEAIFG 196 (445)
Q Consensus 127 --~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~--~G~~~l~~~~~~--~~~d~~i~ 196 (445)
|. .++||++||||+ |++++++|.+++.|++.+..++++|.|+|+++||++ .|++.+++.... ..+|++++
T Consensus 82 ~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~ 161 (377)
T 3isz_A 82 PPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMV 161 (377)
T ss_dssp CTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEEE
Confidence 44 346899999998 699999999999998877778999999999999944 699988764321 24688877
Q ss_pred ecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCeeEEEEEEE
Q 013332 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFE 275 (445)
Q Consensus 197 ~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~i~~i~ 275 (445)
.++....+.|... . .+++|..+++++++|+++|+|.|+.|+||+..+++++.+|+....+. ......++++++.|+
T Consensus 162 ~e~~~~~~~g~~i-~--~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 238 (377)
T 3isz_A 162 GEPSSAKNLGDVV-K--NGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIH 238 (377)
T ss_dssp CCCCBSSSTTSEE-E--EEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEEE
T ss_pred cCCCCcccCCceE-E--EEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEEE
Confidence 6543333333321 1 24679999999999999999999999999999999999998864322 223467899999999
Q ss_pred cCC-ccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCC-CCcccCCHHHHHHHHHHHH
Q 013332 276 GGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSF-YPVTVNNKNLHEHFQKVAA 353 (445)
Q Consensus 276 gG~-~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~d~~l~~~~~~a~~ 353 (445)
||. +.|+||++|++.+|+|+++.++.+++.+++++ +++. +++++++++ ... .|...+++++++.+.++++
T Consensus 239 gg~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~--~~~~----~g~~~~i~~--~~~~~p~~~~~~~l~~~l~~a~~ 310 (377)
T 3isz_A 239 AGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAE--MLEK----HNLKYRIEW--NLSGKPFLTKPGKLLDSITSAIE 310 (377)
T ss_dssp ECCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHH--HHHH----TTCCEEEEE--EECCCCEECCTTHHHHHHHHHHH
T ss_pred CCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHH--HHHH----cCCCeEEEE--EecCCCCcCCCCHHHHHHHHHHH
Confidence 998 89999999999999999999999999999999 7753 577787776 323 3333567789999999999
Q ss_pred HhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 354 DMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 354 ~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
+.+|.++. ....+|++|++++.+. +|++. ||+ +. ..+|++||+++++++.+++++|++++.++++
T Consensus 311 ~~~g~~~~--~~~~~g~tDa~~~~~~g~~~v~--~Gp-----~~-~~~H~~~E~i~~~~l~~~~~i~~~~i~~ll~ 376 (377)
T 3isz_A 311 ETIGITPK--AETGGGTSDGRFIALMGAEVVE--FGP-----LN-STIHKVNECVSVEDLGKCGEIYHKMLVNLLD 376 (377)
T ss_dssp HHHSCCCE--EEECSSCCSHHHHHTTTCEEEE--CCS-----BC-TTTTSTTCEEEHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhCCCCe--eeccCcccHHHHHHHcCCCEEE--ECC-----CC-CcccCCCCcEEHHHHHHHHHHHHHHHHHHhh
Confidence 97798764 2456889999999987 66654 674 33 4699999999999999999999999999875
No 8
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.3e-52 Score=420.59 Aligned_cols=359 Identities=19% Similarity=0.268 Sum_probs=292.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec--cCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCc-
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE- 126 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~- 126 (445)
+++++++++|++|||+|++|.++++||.++|+++|++++.. +..+|++++++. ++|+|+|++||||||.++..+|.
T Consensus 6 ~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~Vp~~~~~~w~~ 84 (393)
T 1vgy_A 6 TQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRRGT-KAPVVCFAGHTDVVPTGPVEKWDS 84 (393)
T ss_dssp SHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSSEEEEEEECCBCCCCCGGGSSS
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEECC-CCCEEEEEcccCCcCCCCcccCCC
Confidence 56899999999999999999999999999999999998763 357899999943 35899999999999998877895
Q ss_pred --cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC-C-ccHHHHHHccCC--CCcceeEE
Q 013332 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGAL--ENVEAIFG 196 (445)
Q Consensus 127 --~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~l~~~~~~--~~~d~~i~ 196 (445)
|. .++||++||||+ |++++++|.+++.|++.+.+++++|+|+|++|||+ + .|++.+++.... ..+|++++
T Consensus 85 ~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (393)
T 1vgy_A 85 PPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIV 164 (393)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEE
Confidence 44 367999999998 79999999999999987777899999999999994 3 799988865322 24678877
Q ss_pred ecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCeeEEEEEEE
Q 013332 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFE 275 (445)
Q Consensus 197 ~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~i~~i~ 275 (445)
.++....+.+.. +. .+++|..+++|+++|+++|||.|+.|.|||..+++++.+|+....+. .++..+.+++++.|+
T Consensus 165 ~e~~~~~~~g~~-i~--~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 241 (393)
T 1vgy_A 165 GEPTAVDKLGDM-IK--NGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNIN 241 (393)
T ss_dssp CCCCBSSSTTSE-EE--CEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEE
T ss_pred eCCCCcccCCce-eE--EeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEc
Confidence 554332233332 11 34679999999999999999999999999999999999998864222 123456799999999
Q ss_pred cCC-ccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHH
Q 013332 276 GGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAAD 354 (445)
Q Consensus 276 gG~-~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~ 354 (445)
||. +.|+||++|++++|+|+++.++.+++.++|++ +++. .++++++++.. ...|...+++++++.+.+++++
T Consensus 242 gG~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~--~~~~----~~~~~~~~~~~-~~~p~~~~~~~l~~~~~~~~~~ 314 (393)
T 1vgy_A 242 GGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHA--ILDK----HGVQYDLQWSC-SGQPFLTQAGKLTDVARAAIAE 314 (393)
T ss_dssp ECCSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHH--HHHH----TTCCEEEEEEE-EECCEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHH--HHHH----hCCCeEEEEec-CCCcccCCCcHHHHHHHHHHHH
Confidence 997 89999999999999999999999999999999 8764 45666666521 1233345578899999999999
Q ss_pred hcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 355 MLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 355 ~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
.+|.++. ....+|++|++++... +|++. ||+.+ ..+|++||+++++++.+++++|+.++.+++..
T Consensus 315 ~~g~~~~--~~~~~g~~D~~~~~~~~~P~v~--~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 380 (393)
T 1vgy_A 315 TCGIEAE--LSTTGGTSDGRFIKAMAQELIE--LGPSN------ATIHQINENVRLNDIPKLSAVYEGILVRLLAG 380 (393)
T ss_dssp HHSSCCE--EECCSCCCTHHHHGGGEEEEEE--CCSBC------TTTTSTTCEEETTHHHHHHHHHHHHHHHHC--
T ss_pred HcCCCce--EecCCccchHHHHHhCCCCEEE--ECCCC------CCCCCCCCceeHHHHHHHHHHHHHHHHHHhcc
Confidence 8898764 3467889999999984 89643 67432 45899999999999999999999999999764
No 9
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.7e-52 Score=417.61 Aligned_cols=360 Identities=21% Similarity=0.210 Sum_probs=297.8
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc-------CCceEEEEEcCC----CC
Q 013332 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTGVVGYIGTG----QP 105 (445)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~-------~~~nvia~~~~~----~~ 105 (445)
.....+++.++ +++++++++|++|||+|++|.++++||+++|+++|++++.+. +.+|++++++++ ++
T Consensus 13 ~~~~~~~~~~~--~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~ 90 (396)
T 3rza_A 13 ENLYFQGMINE--QRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEV 90 (396)
T ss_dssp ------CCSCH--HHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---C
T ss_pred cceeEEEeecH--HHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCC
Confidence 34566777877 999999999999999999999999999999999999988753 368999999653 46
Q ss_pred cEEEEEEecccccCCCCCCCccccCCCCccccCcc-------hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCc
Q 013332 106 PFVALRADMDALAMEESVEWEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (445)
Q Consensus 106 p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~-------kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~ 177 (445)
|+|+|++||||||+++ .|+...+.+|++||||+ |++++++|++++.|++.+ .++++|.|+|+++|| ++.
T Consensus 91 ~~i~l~aH~D~vp~g~--~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g~~ 167 (396)
T 3rza_A 91 PKLYLTSHMDTVVPAI--NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQ-IPHGQIQFVITVGEESGLI 167 (396)
T ss_dssp CCEEEEEECCBCSSCS--SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHT-CCCCCEEEEEESCGGGTSH
T ss_pred CeEEEEEECCccCCCC--CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccH
Confidence 9999999999999875 46332333499999997 599999999999999876 468999999999999 568
Q ss_pred cHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 013332 178 GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLV 257 (445)
Q Consensus 178 G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~ 257 (445)
|++.+.+++. ..++.+..+ +..+.|.+.+ +.+|..+++|+++|+++|+|.|+.|+||+..+++++..|+..
T Consensus 168 Ga~~~~~~~~--~~~~~~~~~--~~~~~g~i~~----~~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~- 238 (396)
T 3rza_A 168 GAKELNSELL--DADFGYAID--ASADVGTTVV----GAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLG- 238 (396)
T ss_dssp HHHHCCGGGC--CCSEEEEEE--ESSCTTCEEE----EECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCE-
T ss_pred hHhhhchhhc--ccceEEEEe--cCCCcceEEE----cCCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccC-
Confidence 9998866543 345555543 3445566544 346899999999999999999999999999999999998653
Q ss_pred cccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCc
Q 013332 258 SREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPV 337 (445)
Q Consensus 258 ~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 337 (445)
..+ ...+++++.|+||.+.|+||++|++.+|+|+.+.++.+.+.++|++ ++++.+..+++++++++ ...+|+
T Consensus 239 --~~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~--~~~~~a~~~g~~~~i~~--~~~~p~ 310 (396)
T 3rza_A 239 --QVD--EITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTD--VFETTASELGGKAEVTV--EQSYPG 310 (396)
T ss_dssp --EEE--TTEEEEEEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHH--HHHHHHHHTTCEEEEEE--EEEECC
T ss_pred --CCC--CCceeeeeEEecCCCCcccCceEEEEEEEEeCCHHHHHHHHHHHHH--HHHHHHHhcCCEEEEEE--EeccCC
Confidence 112 3478999999999999999999999999999999999999999999 99988888899888887 567777
Q ss_pred c--cCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 338 T--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 338 ~--~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
+ .+|+++++.+++++++. |.++. ....+|++|+++|.+. +|++++|.| . ..+|++||++++++|..
T Consensus 311 ~~~~~d~~l~~~~~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~giP~~~~g~g-------~-~~~H~~~E~v~~~~l~~ 379 (396)
T 3rza_A 311 FKINDNEAVVKIAQESARNL-GLSAN--TIISGGGSDGSIINTFGIPSVILGVG-------Y-EKIHTTNERMPIKSLNL 379 (396)
T ss_dssp EECCTTSHHHHHHHHHHHHT-TCCCC--EEECSSCCHHHHHGGGTCCEEEEECC-------C-BSTTSTTCEEEHHHHHH
T ss_pred cccCCCcHHHHHHHHHHHHc-CCCce--ecccceeccHHHHhhCCCcEEEECCC-------C-CCCCCCcceeEHHHHHH
Confidence 6 45788999999999986 87653 3457899999999987 999875533 2 35999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 013332 415 GAALHASLATRYLLE 429 (445)
Q Consensus 415 ~~~~~~~~i~~l~~~ 429 (445)
++++|+.++.++..+
T Consensus 380 ~~~~~~~~~~~l~~~ 394 (396)
T 3rza_A 380 LASQVLEIIKIVARQ 394 (396)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998753
No 10
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=7.7e-52 Score=425.71 Aligned_cols=378 Identities=13% Similarity=0.133 Sum_probs=302.0
Q ss_pred cccchHHHHhhcCchhHHHHHHHHHHHHhCCCC--Ccc------hHHHHHHHHHHHHhCCCCeeecc--------C----
Q 013332 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPEL--GFQ------EFETSKLIRAELDQMGIPYKFPV--------A---- 92 (445)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~--s~~------E~~~a~~l~~~l~~~G~~~~~~~--------~---- 92 (445)
+...++++++++.++ +++++++++|++|||+ |++ |.++++||+++|+++|++++... +
T Consensus 10 ~~~~~~i~~~i~~~~--~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~ 87 (485)
T 3dlj_A 10 PALLEKVFQYIDLHQ--DEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLP 87 (485)
T ss_dssp STTHHHHHHHHHHTH--HHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEE
T ss_pred hHHHHHHHHHHHHhH--HHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccC
Confidence 456678999999988 9999999999999999 887 67899999999999999987642 2
Q ss_pred -CceEEEEEcCC-CCcEEEEEEecccccCCCCCCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCc
Q 013332 93 -VTGVVGYIGTG-QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKG 163 (445)
Q Consensus 93 -~~nvia~~~~~-~~p~i~l~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~ 163 (445)
.+||+++++++ ++|+|+|+|||||||+++...|. |. .++||+|||||+ |++++++|+|+++|++.+..+++
T Consensus 88 ~~~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~ 167 (485)
T 3dlj_A 88 IPPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPV 167 (485)
T ss_dssp CCCEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred CCcEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCc
Confidence 25799999764 46999999999999998766785 44 357999999998 69999999999999998888999
Q ss_pred eEEEEEeecCC-CCccHHHHHHccC---CCCcceeEEecccCCC-CCCceeeccCcccccceEEEEEEEecCC--CCCCC
Q 013332 164 TIVLVFQPAEE-GGGGAKKMLDAGA---LENVEAIFGLHVSSLF-PVGTVASRPGPTLAAGGFFEAVINGKGG--HAAIP 236 (445)
Q Consensus 164 ~i~~i~~~dEE-g~~G~~~l~~~~~---~~~~d~~i~~~~~~~~-p~g~~~~~~g~~~~G~~~~~i~~~G~~~--Has~p 236 (445)
+|.|+|+++|| ++.|++.+++++. ++++|++++.|+.... ....+. .+++|..+++|+++|+++ |||.
T Consensus 168 ~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~----~g~~g~~~~~i~v~G~~~~~H~~~- 242 (485)
T 3dlj_A 168 NIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAIT----YGTRGNSYFMVEVKCRDQDFHSGT- 242 (485)
T ss_dssp EEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEEE----EEECEEEEEEEEEESCSSCEETTT-
T ss_pred cEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeEE----EeccceEEEEEEEEECCCCCcCCC-
Confidence 99999999999 6689999998763 4578999988752210 112222 246799999999999999 9997
Q ss_pred CCCCCHHHHHHHHHHHHHHhhccc-----------CCC-------------C---------------------------C
Q 013332 237 QHTIDPIVAASNVIVSLQHLVSRE-----------ADP-------------L---------------------------D 265 (445)
Q Consensus 237 ~~g~NAi~~~~~~i~~l~~~~~~~-----------~~~-------------~---------------------------~ 265 (445)
.|.||+..++.++..|..+..+. .+| + .
T Consensus 243 -~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 321 (485)
T 3dlj_A 243 -FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWR 321 (485)
T ss_dssp -STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHT
T ss_pred -CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhc
Confidence 35555555555555555443221 111 1 1
Q ss_pred CeeEEEEEEEcC----CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhC--CeEEEEecccCCCCccc
Q 013332 266 SQVLTVAKFEGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQR--CNATVTFDDKSFYPVTV 339 (445)
Q Consensus 266 ~~t~~i~~i~gG----~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~ 339 (445)
.++++++.|+|| .+.|+||++|++++|+|+.+.++.+.+.++|++ +++..+..++ +++++++ ...+|++.
T Consensus 322 ~~~~~v~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~--~~~~~a~~~g~~~~~~v~~--~~~~pp~~ 397 (485)
T 3dlj_A 322 YPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTR--HLEDVFSKRNSSNKMVVSM--TLGLHPWI 397 (485)
T ss_dssp SCEEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHH--HHHHHHHTTCCSSEEEEEE--EEEECCEE
T ss_pred CCceEEEEEecCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHH--HHHHhccccCCCeeEEEEE--cCCCCcee
Confidence 578999999999 899999999999999999999999999999999 9999888777 4777776 55677765
Q ss_pred CC--HHHHHHHHHHHHHhcCCcccccCCCCCccchH-HHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 013332 340 NN--KNLHEHFQKVAADMLGVQNIKENRPLMGTEDF-SFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 416 (445)
Q Consensus 340 ~d--~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~-~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~ 416 (445)
++ +++++.+.+++++.+|.++.. ...+|++|+ .+|.+.+|..++.+|... + ...+|+|||+++++++..++
T Consensus 398 ~~~d~~~~~~~~~a~~~~~G~~~~~--~~~ggs~Dfa~~~~~~~p~~~i~~g~g~--~--~~~~H~p~E~i~~~~l~~g~ 471 (485)
T 3dlj_A 398 ANIDDTQYLAAKRAIRTVFGTEPDM--IRDGSTIPIAKMFQEIVHKSVVLIPLGA--V--DDGEHSQNEKINRWNYIEGT 471 (485)
T ss_dssp CCTTSHHHHHHHHHHHHHHSSCCEE--EEESSCCHHHHHHHHHTC--CEECCCBC--T--TCCTTSTTCEEEHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCcee--cCCCCchhHHHHHHHHhCCCEEEecCCC--C--CCCCcCCCCCccHHHHHHHH
Confidence 54 489999999999988987643 246788896 578777776555566543 1 14699999999999999999
Q ss_pred HHHHHHHHHHHh
Q 013332 417 ALHASLATRYLL 428 (445)
Q Consensus 417 ~~~~~~i~~l~~ 428 (445)
++|++++.++..
T Consensus 472 ~~l~~~l~~la~ 483 (485)
T 3dlj_A 472 KLFAAFFLEMAQ 483 (485)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhh
Confidence 999999998864
No 11
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=2.9e-51 Score=408.03 Aligned_cols=345 Identities=20% Similarity=0.226 Sum_probs=291.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc-------CCceEEEEEcCC--CCcEEEEEEecccccCC
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTGVVGYIGTG--QPPFVALRADMDALAME 120 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~-------~~~nvia~~~~~--~~p~i~l~~H~DtVp~~ 120 (445)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. +++|++++++++ ++|+|+|++||||||++
T Consensus 6 ~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~ 85 (373)
T 3gb0_A 6 ERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPG 85 (373)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSC
T ss_pred HHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCC
Confidence 789999999999999999999999999999999999988753 258999999654 46999999999999987
Q ss_pred CCCCCccccCCCCccccCcc-------hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcc
Q 013332 121 ESVEWEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVE 192 (445)
Q Consensus 121 ~~~~w~~~~~~~g~l~GrG~-------kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d 192 (445)
+ .|+ +..+||++||||+ |++++++|++++.|++.+. ++++|.|+|+++|| ++.|++.+..++. ..|
T Consensus 86 ~--~~~-p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~~ 159 (373)
T 3gb0_A 86 N--GIK-PSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--TAK 159 (373)
T ss_dssp S--SCC-CEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGGC--CCS
T ss_pred C--CcC-cEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHhc--CCC
Confidence 5 453 2467899999996 4899999999999998764 78999999999999 5689998865432 345
Q ss_pred eeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEE
Q 013332 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTV 271 (445)
Q Consensus 193 ~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i 271 (445)
+.+..+ +..+.+.+.+ +.+|..+++|+++|+++|+| .|+.|+||+..+++++.+|+.. ..+ ...++++
T Consensus 160 ~~~~~~--~~~~~g~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~--~~~~~~v 228 (373)
T 3gb0_A 160 YGYALD--SDGKVGEIVV----AAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG---RID--SETTANI 228 (373)
T ss_dssp EEEEEE--ECSCTTEEEE----EECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE---EEE--TTEEEEE
T ss_pred EEEEEc--CCCCCCeEEE----cCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc---cCC--Cccccce
Confidence 555543 3445565543 34689999999999999999 8999999999999999988652 111 3478999
Q ss_pred EEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHH
Q 013332 272 AKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQ 349 (445)
Q Consensus 272 ~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~ 349 (445)
+.|+||.+.|+||++|++.+|+|+.+.++.+.+.++|++ +++..+..+++++++++ ...+|++ .+|+++++.++
T Consensus 229 g~i~gG~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~--~~~~~~~~~g~~~~i~~--~~~~~~~~~~~~~~l~~~~~ 304 (373)
T 3gb0_A 229 GRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKE--AFETTAKEMGGHADVEV--NVMYPGFKFADGDHVVEVAK 304 (373)
T ss_dssp EEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHH--HHHHHHHHTTCEEEEEE--EEEECCEECCTTCHHHHHHH
T ss_pred eEEecCcccccccceEEEEEEEecCCHHHHHHHHHHHHH--HHHHHHHhcCCeEEEEE--ecccCCcccCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999 99988888899888877 5667776 45788999999
Q ss_pred HHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 350 KVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 350 ~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
+++++. |.++. ....+|++|+++|.+. +|++++|.| . ..+|++||+++++++..++++|++++.++
T Consensus 305 ~~~~~~-g~~~~--~~~~~g~~D~~~~~~~gip~~~~g~~-------~-~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 305 RAAEKI-GRTPS--LHQSGGGSDANVIAGHGIPTVNLAVG-------Y-EEIHTTNEKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp HHHHHT-TCCCE--EEECSSCCHHHHHHHTTCCEEEEECC-------C-BSTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-CCCce--EecccCcchHHHHHhCCCCEEEecCC-------C-CcCcCCceEEEHHHHHHHHHHHHHHHHHh
Confidence 999995 87653 3467899999999987 999875433 2 35999999999999999999999999887
No 12
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=9.9e-52 Score=410.78 Aligned_cols=342 Identities=17% Similarity=0.178 Sum_probs=276.2
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCC-eeeccCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCccc
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHK 128 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~~ 128 (445)
+++++++++|++|||+|++|.++++||.++|+++|++ ++....++|++++++++++|+|+|+|||||||+++ .|++.
T Consensus 13 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~~~ 90 (369)
T 3tx8_A 13 GDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLPSR 90 (369)
T ss_dssp SCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCSCE
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCCCe
Confidence 5689999999999999999999999999999999984 55444467999999765569999999999999876 45554
Q ss_pred cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC--ccHHHHHHccC-CCCcceeEEecccC
Q 013332 129 SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--GGAKKMLDAGA-LENVEAIFGLHVSS 201 (445)
Q Consensus 129 ~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~--~G~~~l~~~~~-~~~~d~~i~~~~~~ 201 (445)
.+||++||||+ |++++++|+|++.|++. ..++++|.|+|+++|| ++ .|++.+++.+. ..+.|+++..+
T Consensus 91 -~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~e--- 165 (369)
T 3tx8_A 91 -VEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGE--- 165 (369)
T ss_dssp -ECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEECC---
T ss_pred -EECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEEeC---
Confidence 46899999999 59999999999999874 4789999999999999 44 69999998752 12456666533
Q ss_pred CCCC-CceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC--CC-CCeeEEEEEEEcC
Q 013332 202 LFPV-GTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD--PL-DSQVLTVAKFEGG 277 (445)
Q Consensus 202 ~~p~-g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~--~~-~~~t~~i~~i~gG 277 (445)
|+ +.+. .+++|..+++|+++|+++|||.|+.|.||+..+++++..|+++..+... +. ...+++++.|+||
T Consensus 166 --p~~~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~gG 239 (369)
T 3tx8_A 166 --PTGGWIE----AGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESG 239 (369)
T ss_dssp --CCTTCEE----ESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEEC
T ss_pred --CCCCcee----eecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEECC
Confidence 32 3332 3468999999999999999999999999999999999999987543211 11 2568999999999
Q ss_pred CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcC
Q 013332 278 GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLG 357 (445)
Q Consensus 278 ~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g 357 (445)
.+.|+||++|++++|+|+++.++.+++.++|++ ++++.+ .+++++++... ..++++. .++++++.+.+++ |
T Consensus 240 ~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~--~~~~~~-~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~----g 310 (369)
T 3tx8_A 240 VANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVE--TLELDG-QDGIEWAVEDG-AGGALPG-LGQQVTSGLIDAV----G 310 (369)
T ss_dssp SBTTBCCSEEEEEEEEEECTTSCHHHHHHHHHH--HTTTTT-STTEEEEEEEE-ECCBCCC-TTSHHHHHHHHHH----C
T ss_pred CCCccccCcEEEEEEEecCCCCCHHHHHHHHHH--HHHhcc-cCCeEEEEEec-CCCCCCC-CCCHHHHHHHHHc----C
Confidence 999999999999999999999999999999999 887665 55666666321 3344443 3555666666553 6
Q ss_pred C-cccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013332 358 V-QNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 424 (445)
Q Consensus 358 ~-~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~ 424 (445)
. ++ ....|++|+++|.+. +|++. || ||....+|++||++++++|.+++++|++++.
T Consensus 311 ~~~~----~~~~ggtD~~~~~~~giP~~~--~G-----pg~~~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 311 REKI----RAKFGWTDVSRFSAMGIPALN--FG-----AGDPSFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp GGGE----EECCSCCTHHHHHTTTCCEEE--EC-----SSCSSSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CCCC----cccccccchHHHhhCCCCEEE--EC-----CCChhhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 5 33 246688999999987 99875 67 5555679999999999999999999999875
No 13
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=1.1e-50 Score=417.05 Aligned_cols=374 Identities=15% Similarity=0.109 Sum_probs=304.3
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCcch------HHHHHHHHHHHHhCCCCeeecc--------CC-----ceE
Q 013332 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------FETSKLIRAELDQMGIPYKFPV--------AV-----TGV 96 (445)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E------~~~a~~l~~~l~~~G~~~~~~~--------~~-----~nv 96 (445)
++++.++++.++ +++++++++|++|||+|++| .++++||+++|+++|+++++.. ++ +||
T Consensus 8 ~~~~~~~~~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v 85 (479)
T 2zog_A 8 LKAVFQYIDENQ--DRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPIL 85 (479)
T ss_dssp HHHHHHHHHHTH--HHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEE
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEE
Confidence 467888888877 99999999999999999876 7899999999999999987643 23 899
Q ss_pred EEEEcCC-CCcEEEEEEecccccCCCCCCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEE
Q 013332 97 VGYIGTG-QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLV 168 (445)
Q Consensus 97 ia~~~~~-~~p~i~l~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i 168 (445)
+++++++ ++|+|+|+|||||||.++...|. |. .++||+|||||+ |++++++|++++.|++.+.+++++|.|+
T Consensus 86 ~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~ 165 (479)
T 2zog_A 86 LGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFC 165 (479)
T ss_dssp EEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEE
T ss_pred EEEecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEE
Confidence 9999764 36999999999999997766784 44 256899999996 6999999999999999887889999999
Q ss_pred EeecCC-CCccHHHHHHcc---CCCCcceeEEecccCCCC-CCceeeccCcccccceEEEEEEEecC--CCCCCCCCCCC
Q 013332 169 FQPAEE-GGGGAKKMLDAG---ALENVEAIFGLHVSSLFP-VGTVASRPGPTLAAGGFFEAVINGKG--GHAAIPQHTID 241 (445)
Q Consensus 169 ~~~dEE-g~~G~~~l~~~~---~~~~~d~~i~~~~~~~~p-~g~~~~~~g~~~~G~~~~~i~~~G~~--~Has~p~~g~N 241 (445)
|+++|| ++.|++.+++++ .+.++|++++.++....+ .+.+. .+++|..+++|+++|++ +|||.+ |.|
T Consensus 166 ~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~----~~~~G~~~~~i~v~G~~~~~Hs~~~--g~~ 239 (479)
T 2zog_A 166 LEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCIT----YGLRGICYFFIEVECSDKDLHSGVY--GGS 239 (479)
T ss_dssp EESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEE----EEECEEEEEEEEEECCSSCEEHHHH--TTT
T ss_pred EecccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEE----EecceEEEEEEEEEeCCCCCccCCC--CCC
Confidence 999999 668999999875 344678888876432111 23332 35789999999999999 999985 789
Q ss_pred HHHHHHHHHHHHHHhhcccC-----------C-------------CC---------------------------CCeeEE
Q 013332 242 PIVAASNVIVSLQHLVSREA-----------D-------------PL---------------------------DSQVLT 270 (445)
Q Consensus 242 Ai~~~~~~i~~l~~~~~~~~-----------~-------------~~---------------------------~~~t~~ 270 (445)
|+..+++++..|+.+..+.. . +. ..++++
T Consensus 240 ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 319 (479)
T 2zog_A 240 VHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLS 319 (479)
T ss_dssp SCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEE
T ss_pred ccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeE
Confidence 99999999998876543210 0 00 147899
Q ss_pred EEEEEcC----CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhh--CCeEEEEecccCCCCcc--cCCH
Q 013332 271 VAKFEGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQ--RCNATVTFDDKSFYPVT--VNNK 342 (445)
Q Consensus 271 i~~i~gG----~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~--~~d~ 342 (445)
++.|+|| .+.|+||++|++++|+|+.|+++.+.+.++|++ +++..+..+ +..+++++ ...+|++ +.|+
T Consensus 320 v~~i~gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~--~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~d~ 395 (479)
T 2zog_A 320 LHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSS--YLSKKFAELQSPNKFKVYM--GHGGKPWVSDFNH 395 (479)
T ss_dssp EEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHH--HHHHHHHTTCCCSEEEEEE--EEEECCEECCTTS
T ss_pred EeeeecCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHH--HHHHhhhccCCCceEEEEe--cCCCCceecCCCC
Confidence 9999998 799999999999999999999999999999999 998876554 56667665 4456665 3477
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCCccchH-HHHHhh--cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 013332 343 NLHEHFQKVAADMLGVQNIKENRPLMGTEDF-SFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALH 419 (445)
Q Consensus 343 ~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~-~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~ 419 (445)
++++.+.+++++.+|.++.. ...+|++|+ ++|.+. +|++++++|+ +. ..+|++||+++++++..++++|
T Consensus 396 ~~~~~~~~a~~~~~g~~~~~--~~~~gs~d~~~~~~~~~~~p~~~~g~g~-----~~-~~~H~~~E~i~~~~l~~~~~~~ 467 (479)
T 2zog_A 396 PHYQAGRRALKTVFGVEPDL--TREGGSIPVTLTFQEATGKNVMLLPVGS-----AD-DGAHSQNEKLNRLNYIEGTKML 467 (479)
T ss_dssp HHHHHHHHHHHHHHSSCCEE--EEESSCCTHHHHHHHHHCSEEEECCCBC-----TT-CCTTSTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcee--cCCCCccchHHHHHHHhCCCEEEecCCC-----Cc-cCCCCCCCcEeHHHHHHHHHHH
Confidence 89999999999988887642 345788997 577764 8887766673 33 4699999999999999999999
Q ss_pred HHHHHHHHhh
Q 013332 420 ASLATRYLLE 429 (445)
Q Consensus 420 ~~~i~~l~~~ 429 (445)
+.++.+++..
T Consensus 468 ~~~~~~~~~~ 477 (479)
T 2zog_A 468 AAYLYEVSQL 477 (479)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999998763
No 14
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=2e-50 Score=401.32 Aligned_cols=338 Identities=15% Similarity=0.122 Sum_probs=274.3
Q ss_pred hcCchhHHHHHHHHHHHHhCCCCC--c---chHHHHHHHHHHHHhCCCCeeecc---CCceEEEEEcCCCCcEEEEEEec
Q 013332 43 AKKPEIFYWMVNIRRKIHENPELG--F---QEFETSKLIRAELDQMGIPYKFPV---AVTGVVGYIGTGQPPFVALRADM 114 (445)
Q Consensus 43 ~~~~~~~~~~~~ll~~l~~ips~s--~---~E~~~a~~l~~~l~~~G~~~~~~~---~~~nvia~~~~~~~p~i~l~~H~ 114 (445)
++.++ +++++++++|++|||+| + +|.++++||.++|+ ||+++... +++|+++ +++. |+|+|++||
T Consensus 4 ~~~~~--~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~ 76 (369)
T 2f7v_A 4 MTDLL--ASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHL 76 (369)
T ss_dssp CCHHH--HHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEEC
T ss_pred hhhhh--HHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeee
Confidence 34445 88999999999999999 8 89999999999999 99987642 4689999 8654 789999999
Q ss_pred ccccCCCCCCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC-C-ccHHHHHHc
Q 013332 115 DALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDA 185 (445)
Q Consensus 115 DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~l~~~ 185 (445)
||||.++ .|. |. .++||+|||||+ |++++++|.+++. ++++|.|+|++|||. + .|+++++++
T Consensus 77 D~vp~~~--~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~~ 147 (369)
T 2f7v_A 77 DTVPDSP--HWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLAR 147 (369)
T ss_dssp CBCCCCS--SCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHTT
T ss_pred cccCCCC--CCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHhc
Confidence 9999876 564 54 357899999998 8999999988865 779999999999995 5 799999987
Q ss_pred cCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCC-CCCCHHHHHHHHHHHHHHhhcccC---
Q 013332 186 GALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQ-HTIDPIVAASNVIVSLQHLVSREA--- 261 (445)
Q Consensus 186 ~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~-~g~NAi~~~~~~i~~l~~~~~~~~--- 261 (445)
+. ++|++++.++. .+.+ ..+++|..+++|+++|+++|||.|+ .|.|||..+++++.+|+.+..+..
T Consensus 148 ~~--~~d~~i~~e~~----~~~i----~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~ 217 (369)
T 2f7v_A 148 GL--PYDAVLVAEPT----MSEA----VLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHAR 217 (369)
T ss_dssp CC--CCSEEEECCCS----TTCB----BCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred CC--CCCEEEECCCC----CCcc----eeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhcccc
Confidence 65 57888875431 1222 3457899999999999999999999 999999999999999988754321
Q ss_pred -CCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEeccc-CCCCccc
Q 013332 262 -DPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDK-SFYPVTV 339 (445)
Q Consensus 262 -~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~ 339 (445)
++...++++++.|+||.+.|+||++|++++|+|+++.++.+++.++|++ +++.. +++++++. . ..+|++.
T Consensus 218 ~~~~~~~~~~vg~i~gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~--~~~~~----~~~~~~~~--~~~~~~~~~ 289 (369)
T 2f7v_A 218 FGGLTGLRFNIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAG--FADPA----AAHFEETF--RGPSLPSGD 289 (369)
T ss_dssp ETTEESCEEEEEEEEECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHH--TCSSC----CSEEEEEE--EECCBSCSS
T ss_pred cCcccCCceEEEEeecCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHH--HHHHh----cCceEEEe--ccCCCCccC
Confidence 1211269999999999999999999999999999999999999999999 76532 45666654 3 3577776
Q ss_pred CC-HHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 013332 340 NN-KNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAA 417 (445)
Q Consensus 340 ~d-~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~ 417 (445)
++ +++++.+++++++.+|.++. ....|++|+++|.+. +|++ .|| ||....+|++||++++++|.++++
T Consensus 290 ~~~~~l~~~~~~a~~~~~g~~~~---~~~~g~~D~~~~~~~g~p~v--~~G-----pg~~~~~H~~~E~~~~~~l~~~~~ 359 (369)
T 2f7v_A 290 IARAEERRLAARDVADALDLPIG---NAVDFWTEASLFSAGGYTAL--VYG-----PGDIAQAHTADEFVTLAQLQRYVE 359 (369)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCBC---CCBSSCCTHHHHHHTTCCEE--ECC-----SSCGGGTTCTTCEEEHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhCCCCC---ccccccCcHHHHhhCCCCEE--EEC-----CCCccccCCCCceEEHHHHHHHHH
Confidence 66 88999999999998887653 357899999999988 9987 467 554567999999999999999999
Q ss_pred HHHHHHH
Q 013332 418 LHASLAT 424 (445)
Q Consensus 418 ~~~~~i~ 424 (445)
+|++++.
T Consensus 360 ~~~~~~~ 366 (369)
T 2f7v_A 360 SVNRIIN 366 (369)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998875
No 15
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=7.6e-51 Score=418.10 Aligned_cols=371 Identities=13% Similarity=0.085 Sum_probs=296.3
Q ss_pred chHHHHhhcCchhHH-HHHHHHHHHHhCCCCCcch---HHHHHHHHHHHHhCCCCeeec--cCCceEEEEEcCC--CCcE
Q 013332 36 PVKFLDFAKKPEIFY-WMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTG--QPPF 107 (445)
Q Consensus 36 ~~~~~~~~~~~~~~~-~~~~ll~~l~~ips~s~~E---~~~a~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~--~~p~ 107 (445)
++++.+++++++ + ++++++++|++|||+|++| .++++||+++|+++|++++.. .+++||+++++++ ++|+
T Consensus 31 m~~~~~~~~~~~--~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~ 108 (481)
T 2pok_A 31 QEQIEKFEKDHV--AQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKT 108 (481)
T ss_dssp HHHHHHHHHCHH--HHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCE
T ss_pred HHHHHHHHHhhh--hHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCe
Confidence 478999999987 8 9999999999999999877 899999999999999998764 3478999999643 3589
Q ss_pred EEEEEecccccCCCCCCC---ccc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccH
Q 013332 108 VALRADMDALAMEESVEW---EHK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGA 179 (445)
Q Consensus 108 i~l~~H~DtVp~~~~~~w---~~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~ 179 (445)
|+|+|||||||.++...| ||. .++||++||||+ |++++++|+|++.|++.+..++++|.|+|+++|| |+.|+
T Consensus 109 i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~ 188 (481)
T 2pok_A 109 LIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDL 188 (481)
T ss_dssp EEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTH
T ss_pred EEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchhH
Confidence 999999999999887789 454 356899999997 8999999999999998755789999999999999 66899
Q ss_pred HHHHHccC--CCCcceeEEecccCCCCC-CceeeccCcccccceEEEEEEEecC--CCCCCCCCCCCHHHHHHHHHHHHH
Q 013332 180 KKMLDAGA--LENVEAIFGLHVSSLFPV-GTVASRPGPTLAAGGFFEAVINGKG--GHAAIPQHTIDPIVAASNVIVSLQ 254 (445)
Q Consensus 180 ~~l~~~~~--~~~~d~~i~~~~~~~~p~-g~~~~~~g~~~~G~~~~~i~~~G~~--~Has~p~~g~NAi~~~~~~i~~l~ 254 (445)
+.+++++. ++++|++++.++ +.+. +... ...+++|..+++|+++|++ +||+.|+.|.|||..+++++..|+
T Consensus 189 ~~~~~~~~~~~~~~d~~i~~~~--~~~~~~~~~--i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~ 264 (481)
T 2pok_A 189 DKYLEKHADKLRGADLLVWEQG--TKNALEQLE--ISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLR 264 (481)
T ss_dssp HHHHHHHHHHHTTCSEEECSCC--BBCTTSCEE--EECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTB
T ss_pred HHHHHHhHhhccCCCEEEECCC--CccCCCCee--EEEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhh
Confidence 98887641 333788886543 2111 2122 2346789999999999999 899999999999999999999987
Q ss_pred Hhh-----------------------ccc--------------CCC-------------CCCeeEEEEEEEcCC----cc
Q 013332 255 HLV-----------------------SRE--------------ADP-------------LDSQVLTVAKFEGGG----AF 280 (445)
Q Consensus 255 ~~~-----------------------~~~--------------~~~-------------~~~~t~~i~~i~gG~----~~ 280 (445)
... .+. .++ ...+++|++.|+||. +.
T Consensus 265 ~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~~~ 344 (481)
T 2pok_A 265 AADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVK 344 (481)
T ss_dssp CTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSSCC
T ss_pred CCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCCCC
Confidence 642 000 000 024799999999986 78
Q ss_pred ccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcc--cCCHHHHHHHHHHHHHhcCC
Q 013332 281 NIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGV 358 (445)
Q Consensus 281 NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~ 358 (445)
|+||++|++++|+|+.+.++.+.+.++|++ +++..+. .++++++. ..+|++ +.|+++++.+.+++++.+|.
T Consensus 345 NvIP~~a~~~~diR~~~~~~~~~v~~~i~~--~~~~~~~-~~~~v~~~----~~~p~~~~~~d~~l~~~~~~a~~~~~g~ 417 (481)
T 2pok_A 345 TILPAEASAKLEVRLVPGLEPHDVLEKIRK--QLDKNGF-DKVELYYT----LGEMSYRSDMSAPAILNVIELAKKFYPQ 417 (481)
T ss_dssp CEECSEEEEEEEEEECTTCCHHHHHHHHHH--HHHHTTC-TTEEEEEE----EEECCBCCCSCSHHHHHHHHHHTTTCTT
T ss_pred eeccCeeEEEEEEEeCCCCCHHHHHHHHHH--HHHhhCC-CceEEEEc----cCCCcccCCCCCHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999 8876543 45555443 244554 35788999999999998888
Q ss_pred cccccCCCCCccchHHHHHhh--cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 359 QNIKENRPLMGTEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 359 ~~~~~~~~~~g~tD~~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
+++.. ...+|++|+++|.+. +|++. +|+.. | ...+|++||+++++++.+++++|++++.++
T Consensus 418 ~~~~~-~~~gg~~D~~~~~~~~g~p~v~--~G~g~--~--~~~~H~~~E~i~i~~l~~~~~~~~~~l~~l 480 (481)
T 2pok_A 418 GVSVL-PTTAGTGPMHTVFDALEVPMVA--FGLGN--A--NSRDHGGDENVRIADYYTHIELVEELIRSY 480 (481)
T ss_dssp CEEEE-SCBSSCCTHHHHHHHHCCCEEB--CCSBC--T--TCCTTSTTCEEEHHHHHHHHHHHHHHHHTT
T ss_pred Ccccc-ccCCCCCchHHHHHHcCCCEEE--ecCCC--c--ccCCCCCCCcEEHHHHHHHHHHHHHHHHhc
Confidence 76322 334455599999875 88864 56332 1 256999999999999999999999988653
No 16
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=3e-50 Score=412.41 Aligned_cols=375 Identities=12% Similarity=0.044 Sum_probs=293.4
Q ss_pred chHHHHhhcCchhHHHHHHHHHHHHhCCCCCcc----------hHHHHHHHHHHHHhCCCC---eeec--cC-CceEEEE
Q 013332 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ----------EFETSKLIRAELDQMGIP---YKFP--VA-VTGVVGY 99 (445)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~----------E~~~a~~l~~~l~~~G~~---~~~~--~~-~~nvia~ 99 (445)
.+++++++++++ .+++++++++|++|||+|++ |.++++|++++|+++||+ ++.. .+ ++||+|+
T Consensus 5 ~~~~~~~~~~~~-~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~ 83 (472)
T 3pfe_A 5 PQGLYDYICQQW-QEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFME 83 (472)
T ss_dssp HHHHHHHHHHHH-HHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEE
T ss_pred HHHHHHHHHHhh-HHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEE
Confidence 346778887642 15699999999999999965 899999999999999995 4432 22 5899999
Q ss_pred EcCCCCcEEEEEEecccccCCCCCCCc-----ccc-CCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEe
Q 013332 100 IGTGQPPFVALRADMDALAMEESVEWE-----HKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQ 170 (445)
Q Consensus 100 ~~~~~~p~i~l~~H~DtVp~~~~~~w~-----~~~-~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~ 170 (445)
+++.++|+|+|+|||||||+++ .|. |.. ++||+|||||+ |++++++|+|+++|++.+..++ +|+|+|+
T Consensus 84 ~~g~~~~~i~l~~H~D~vp~~~--~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~ 160 (472)
T 3pfe_A 84 IPGQIDDTVLLYGHLDKQPEMS--GWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIE 160 (472)
T ss_dssp ECCSEEEEEEEEEECCBCCCCS--CCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEE
T ss_pred EcCCCCCeEEEEccccCCCCcC--CCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEE
Confidence 9664468999999999999963 675 443 67999999998 6999999999999998876666 9999999
Q ss_pred ecCC-CCccHHHHHHcc--CCCCcceeEEecccCCCCCCceeeccCcccccceEEE--EEEEecCCCCCCCCCC-CCHHH
Q 013332 171 PAEE-GGGGAKKMLDAG--ALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFE--AVINGKGGHAAIPQHT-IDPIV 244 (445)
Q Consensus 171 ~dEE-g~~G~~~l~~~~--~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~--i~~~G~~~Has~p~~g-~NAi~ 244 (445)
++|| ++.|++.+++++ .+.++|++++.|+....+ +...+. .+++|..+++ |+++|+++|||.|+.+ .|||.
T Consensus 161 ~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~i~--~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~ 237 (472)
T 3pfe_A 161 ACEESGSYDLPFYIELLKERIGKPSLVICLDSGAGNY-EQLWMT--TSLRGNLVGKLTVELINEGVHSGSASGIVADSFR 237 (472)
T ss_dssp SCGGGTSTTHHHHHHHHHHHHCCCSEEEEECCBCSCS-SSCEEE--EEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHH
T ss_pred eCCCCCChhHHHHHHHhHhhccCCCEEEEeCCCcCCC-CCeeEE--EeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHH
Confidence 9999 668999999875 334689999887532112 222222 3457887776 5558999999987754 59999
Q ss_pred HHHHHHHHHHHhh-ccc--------C-----------------------------CCCC------------CeeEEEEEE
Q 013332 245 AASNVIVSLQHLV-SRE--------A-----------------------------DPLD------------SQVLTVAKF 274 (445)
Q Consensus 245 ~~~~~i~~l~~~~-~~~--------~-----------------------------~~~~------------~~t~~i~~i 274 (445)
.+++++.+|+++. .+. . ++.. .+|++++.|
T Consensus 238 ~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i 317 (472)
T 3pfe_A 238 VARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGA 317 (472)
T ss_dssp HHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEE
T ss_pred HHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeee
Confidence 9999999998762 100 0 0110 579999999
Q ss_pred EcC----CccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccC-CCCcccC---CHHHHH
Q 013332 275 EGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKS-FYPVTVN---NKNLHE 346 (445)
Q Consensus 275 ~gG----~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~---d~~l~~ 346 (445)
+|| .+.|+||++|++++|+|+.+.++.+.+.++|++ +++..+ .++++++++. .. .+|++.. ++.+++
T Consensus 318 ~gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~--~~~~~~-~~g~~v~v~~--~~~~~pp~~~~~n~~~l~~ 392 (472)
T 3pfe_A 318 DGFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEK--ALTQNP-PYNAKVDFKI--QNGGSKGWNAPLLSDWLAK 392 (472)
T ss_dssp ESCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHH--HHHSSC-GGGCEEEEEE--CSCCBCCEECCCCCHHHHH
T ss_pred ecCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHH--HHHhhC-CCCeEEEEEe--cCCCCCcccCCCCChHHHH
Confidence 987 689999999999999999999999999999999 988765 5688888876 55 6777653 455889
Q ss_pred HHHHHHHHhcCCcccccCCCCCccch-H-HHHHhhcCeE-EEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013332 347 HFQKVAADMLGVQNIKENRPLMGTED-F-SFFAEAIPGY-FYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 423 (445)
Q Consensus 347 ~~~~a~~~~~g~~~~~~~~~~~g~tD-~-~~~~~~ip~~-~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i 423 (445)
.+++++++.+|.++.. ...|++| + ++|.+.+|.+ ++.+|+.+ |+ ..+|+|||++++++|..++++|++++
T Consensus 393 ~~~~a~~~~~G~~~~~---~~~gg~d~f~~~~~~~~Pg~p~v~~G~g~--~~--~~~H~p~E~i~~~~l~~g~~~l~~~l 465 (472)
T 3pfe_A 393 AASEASMTYYDKPAAY---MGEGGTIPFMSMLGEQFPKAQFMITGVLG--PH--SNAHGPNEFLHLDMVKKLTSCVSYVL 465 (472)
T ss_dssp HHHHHHHHHHSSCCEE---EEESSCCHHHHHHHHHCTTCEEEEECCBC--TT--CCTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcee---ccCCCchhhHHHHHHHcCCCCEEEecCCC--CC--CCCcCCCcceeHHHHHHHHHHHHHHH
Confidence 9999999987987642 2345666 3 6777767754 55667543 22 46999999999999999999999999
Q ss_pred HHHHhh
Q 013332 424 TRYLLE 429 (445)
Q Consensus 424 ~~l~~~ 429 (445)
.++...
T Consensus 466 ~~la~~ 471 (472)
T 3pfe_A 466 YSFSQK 471 (472)
T ss_dssp HHHHHC
T ss_pred HHHhhc
Confidence 988753
No 17
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=8.6e-51 Score=401.86 Aligned_cols=328 Identities=16% Similarity=0.139 Sum_probs=268.6
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcC-C-CCcEEEEEEecccccCCCCCCCc-
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT-G-QPPFVALRADMDALAMEESVEWE- 126 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~-~-~~p~i~l~~H~DtVp~~~~~~w~- 126 (445)
+++++++++|++|||+|++|.++++||.++|+++|++++.+ .+|+++++++ + ++|+|+|.+||||||.++ .|.
T Consensus 11 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~--~w~~ 86 (356)
T 3ct9_A 11 AEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVN--GWRK 86 (356)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------
T ss_pred HHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCC--CCCC
Confidence 78999999999999999999999999999999999998865 7899999965 3 368999999999999876 574
Q ss_pred --cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC-C-ccHHHHHHccCCCCcceeEEec
Q 013332 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGALENVEAIFGLH 198 (445)
Q Consensus 127 --~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~l~~~~~~~~~d~~i~~~ 198 (445)
|. .++||++||||+ |++++++|++++.|++.+ ++++|.|+|+++||. + .|++.+++++ .++|+++..+
T Consensus 87 ~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~d~~i~~e 162 (356)
T 3ct9_A 87 DPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPVSFAIVGE 162 (356)
T ss_dssp --CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCCSEEEECC
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCCCEEEEcC
Confidence 54 346899999998 689999999999999876 889999999999995 5 8999999876 3577776643
Q ss_pred ccCCCCC-CceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCC-CCCeeEEEEEEEc
Q 013332 199 VSSLFPV-GTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADP-LDSQVLTVAKFEG 276 (445)
Q Consensus 199 ~~~~~p~-g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~-~~~~t~~i~~i~g 276 (445)
|+ +.+ ..+++|..+++|+++|+++|||.| .|.|||..+++++.+|+.+..+..++ .+..+++++.|+|
T Consensus 163 -----p~~~~i----~~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~vg~i~g 232 (356)
T 3ct9_A 163 -----PTEMQP----AIAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVINA 232 (356)
T ss_dssp -----SBTTCC----EEEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEEEEEEEE
T ss_pred -----CCCceE----EEeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccccCCCCcEEeeEEec
Confidence 33 333 234679999999999999999999 99999999999999999875443333 3568999999999
Q ss_pred CCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEeccc-CCCCcc--cCCHHHHHHHHHHHH
Q 013332 277 GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDK-SFYPVT--VNNKNLHEHFQKVAA 353 (445)
Q Consensus 277 G~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~--~~d~~l~~~~~~a~~ 353 (445)
|.+.|+||++|++++|+|+++.++.+++.++|++ +++. ++++ . ..+|++ ++|+++++.++++++
T Consensus 233 G~~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~--~~~~---------~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~ 299 (356)
T 3ct9_A 233 GTQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRK--HIAC---------DAKA--RSFRLNSSRIDEKHPFVQKAVKMGR 299 (356)
T ss_dssp CSSTTBCCSEEEEEEEEECCTTCCHHHHHHHHHH--HCCS---------EEEE--SCSCSCCEECCTTSHHHHHHHHTTC
T ss_pred CCcCCcCCCceEEEEEEeeCCCCCHHHHHHHHHH--HhhC---------eEEE--eeccCCCCCCCCCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999 7642 3443 3 445554 356788888776653
Q ss_pred HhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 354 DMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 354 ~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
+ + ...+|++|++. ..+|++. || ||....+|++||++++++|..++++|+.++.++
T Consensus 300 ~-----~----~~~~g~tD~~~--~~~p~v~--~G-----~g~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~ 354 (356)
T 3ct9_A 300 I-----P----FGSPTLSDQAL--MSFASVK--IG-----PGRSSRSHTAEEYIMLKEIEEAIGIYLDLLDGL 354 (356)
T ss_dssp C-----C----EEECSCCGGGG--CCSCEEE--CC-----SSBGGGTTSTTCEEEHHHHHHHHHHHHHHHTTC
T ss_pred C-----C----cccccccchhh--cCCCEEE--EC-----CCccccCcCCCcEEEHHHHHHHHHHHHHHHHHh
Confidence 2 1 23678999993 2489853 67 444456999999999999999999999988764
No 18
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=1.9e-49 Score=393.32 Aligned_cols=336 Identities=16% Similarity=0.098 Sum_probs=273.9
Q ss_pred HHHHHHHHHHHhCCCCC---cchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEc---CCCCcEEEEEEecccccCCCCC
Q 013332 50 YWMVNIRRKIHENPELG---FQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIG---TGQPPFVALRADMDALAMEESV 123 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s---~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~---~~~~p~i~l~~H~DtVp~~~~~ 123 (445)
+++++++++|++|||+| ++|.++++||.++|+++|++++.. .+|+++.+. ++++|+|+|.+||||||. .
T Consensus 6 ~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~---~ 80 (364)
T 2rb7_A 6 QHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA---E 80 (364)
T ss_dssp HHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--EETTEEEEEECSBTTEEEEEEEEECCCCCC---C
T ss_pred HHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--cCCCceEEEEEcCCCCCeEEEECccCcCCC---C
Confidence 77999999999999999 899999999999999999998764 368888875 233589999999999986 3
Q ss_pred CCcccc-CCCCccccCcc---hHHHHHHHHHHHHHHhccccC---Cce--EEEEEeecCC-CC-ccHHHHHHccCCCCcc
Q 013332 124 EWEHKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEI---KGT--IVLVFQPAEE-GG-GGAKKMLDAGALENVE 192 (445)
Q Consensus 124 ~w~~~~-~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l---~~~--i~~i~~~dEE-g~-~G~~~l~~~~~~~~~d 192 (445)
..||.. +++|++||||+ |++++++|++++.|++.+.++ +++ |.|+|+++|| ++ .|++++++++ ++|
T Consensus 81 ~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~d 157 (364)
T 2rb7_A 81 DDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RAD 157 (364)
T ss_dssp GGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EEE
T ss_pred CCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CCC
Confidence 557763 46899999998 689999999999999877666 568 9999999999 44 7999998875 456
Q ss_pred eeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCC--CCeeEE
Q 013332 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPL--DSQVLT 270 (445)
Q Consensus 193 ~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~--~~~t~~ 270 (445)
+++. .++++|++ +.+ +++|..+++|+++|+++|||.|+.|.|||..+++++..|+.+.. .... +..+++
T Consensus 158 ~~i~--~d~~~p~~-i~~----~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~--~~~~~~~~~~~~ 228 (364)
T 2rb7_A 158 YVVA--LDGGNPQQ-VIT----KEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA--EENEDHWHRTVN 228 (364)
T ss_dssp EEEE--CSSSBTTE-EEE----EECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC--CCCTTCCSCEEE
T ss_pred EEEE--ccCCcccc-eEE----EeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc--chhhcCCCceEE
Confidence 5554 45567888 433 46799999999999999999999999999999999999988732 1112 468999
Q ss_pred EEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHH
Q 013332 271 VAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQK 350 (445)
Q Consensus 271 i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~ 350 (445)
++.|+||.+.|+||++|++++|+|+++.++.+.+.++|++ +++. +++... ..++ ..+.|+++++.+++
T Consensus 229 vg~i~gG~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~--~~~~-------~v~~~~--~~~~-~~~~~~~l~~~~~~ 296 (364)
T 2rb7_A 229 LGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRK--TVSG-------TVSIVR--TVPV-FLAADSPYTERLLA 296 (364)
T ss_dssp EEEEEECSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHH--HCSS-------EEEEEE--EECC-EECCCCHHHHHHHH
T ss_pred EEEEecCCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHH--Hhhh-------hEEecc--CCcc-ccCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999 7643 333211 1122 22346689999999
Q ss_pred HHHHhcCCcccccCCCCCccchHHHHHh-hcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 351 VAADMLGVQNIKENRPLMGTEDFSFFAE-AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 351 a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
+++ .+|. ...|++|+++|.+ .+|++. || ||.....|++||++++++|..++++|+.++.+++..
T Consensus 297 ~~~-~~g~-------~~~g~~D~~~~~~~~~p~v~--~G-----p~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~ 361 (364)
T 2rb7_A 297 LSG-ATAG-------KAHGASDARYLGENGLTGVV--WG-----AEGFNTLHSRDECLHIPSLQSIYDPLMQLAREMEEH 361 (364)
T ss_dssp HHC-CEEE-------EESSCCGGGGTGGGTCCEEE--CC-----CCCTTCTTSTTCEEETTHHHHHHHHHHHHHHHHHC-
T ss_pred HHH-hcCC-------CCCCCchHHHHHhcCCCEEE--EC-----CCCccccCCCCccccHHHHHHHHHHHHHHHHHHHhh
Confidence 887 4453 1578899999998 499865 67 444413499999999999999999999999999853
No 19
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=2.5e-49 Score=407.13 Aligned_cols=361 Identities=11% Similarity=0.079 Sum_probs=249.7
Q ss_pred ccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcch------------HHHHHHHHHHHHhCCCCeeeccCCceEEEEEc
Q 013332 34 QIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------------FETSKLIRAELDQMGIPYKFPVAVTGVVGYIG 101 (445)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E------------~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~ 101 (445)
...+++.+++++++ +++++++++|++|||+|++| .++++||.++|+++||+++..+ |+++.+.
T Consensus 20 ~m~~~i~~~i~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~---~~~~~~~ 94 (492)
T 3khx_A 20 HMASMWKEKVQQYE--DQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD---HIAGRIE 94 (492)
T ss_dssp ---CTTHHHHHTTH--HHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET---TTEEEEE
T ss_pred hhHHHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC---CEEEEEE
Confidence 33457888999988 99999999999999999887 4899999999999999987643 4454442
Q ss_pred -CCCCcEEEEEEecccccCCCCCCCc---cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecC
Q 013332 102 -TGQPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAE 173 (445)
Q Consensus 102 -~~~~p~i~l~~H~DtVp~~~~~~w~---~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dE 173 (445)
+..+|+|+|+|||||||+++ .|. |. .++||+|||||+ |++++++|+|+++|++.+..++++|.|+|++||
T Consensus 95 ~g~~~~~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 172 (492)
T 3khx_A 95 AGKGNDVLGILCHVDVVPAGD--GWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDE 172 (492)
T ss_dssp EECSSCEEEEEEECCCCCCCS--CCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCT
T ss_pred eCCCCCEEEEEEeccCCCCCC--CcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCc
Confidence 22358999999999999975 684 54 478999999998 799999999999999988888999999999999
Q ss_pred C-CCccHHHHHHccCCCCcceeEEecccCCC------------------------------------------CCCc--e
Q 013332 174 E-GGGGAKKMLDAGALENVEAIFGLHVSSLF------------------------------------------PVGT--V 208 (445)
Q Consensus 174 E-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~------------------------------------------p~g~--~ 208 (445)
| ++.|+++++++.. .+|+.+..+ ... |... +
T Consensus 173 E~g~~g~~~~~~~~~--~~~~~~~~d--~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~ai 248 (492)
T 3khx_A 173 ESDWKCTDRYFKTEE--MPTLGFAPD--AEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEAR 248 (492)
T ss_dssp TCCCCTTSHHHHHSC--CCSEEECSS--CSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEE
T ss_pred cCCCcCHHHHHHhCc--CCCEEEecC--CCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheE
Confidence 9 6689999998753 233332211 000 0000 1
Q ss_pred eecc---------------Ccccccce-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH------Hhhc---c
Q 013332 209 ASRP---------------GPTLAAGG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ------HLVS---R 259 (445)
Q Consensus 209 ~~~~---------------g~~~~G~~-----~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~------~~~~---~ 259 (445)
...+ ..+++|.. +++|+++|+++|||.|+.|+|||..+++++.+|+ .+.. .
T Consensus 249 v~ept~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~ 328 (492)
T 3khx_A 249 VLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNR 328 (492)
T ss_dssp EEECSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHH
T ss_pred eecccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 1111 12347888 9999999999999999999999999999998876 2110 0
Q ss_pred --------------cCC-CCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCe
Q 013332 260 --------------EAD-PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCN 324 (445)
Q Consensus 260 --------------~~~-~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~ 324 (445)
..+ ..+..++|++.|++|. |++|++++|+|+++.++.+++.++|++ +++ ..+++
T Consensus 329 ~~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~~g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~--~~~----~~g~~ 397 (492)
T 3khx_A 329 YLFNSDFGEKMGMKFHTDVMGDVTTNIGVITYDN-----ENAGLFGINLRYPEGFEFEKAMDRFAN--EIQ----QYGFE 397 (492)
T ss_dssp HTTTCTTSGGGTCC-------CCEEEEEEEEEET-----TTCCEEEEEEEECTTCCHHHHHHHHHH--HHG----GGTEE
T ss_pred hhCCCCCccccCCccccCCcCccEEeeeEEEEec-----CCEEEEEEEeeCCCCCCHHHHHHHHHH--HHH----HcCCE
Confidence 011 2467899999999886 999999999999999999999999999 765 34666
Q ss_pred EEEEecccCCCCc--ccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCC
Q 013332 325 ATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHS 402 (445)
Q Consensus 325 ~~i~~~~~~~~~~--~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~ 402 (445)
+++.. .+++ .+.|+++++.+++++++.+|.++ .....+|+||++++.+.+| +|+.. ||....+|+
T Consensus 398 ~~i~~----~~~p~~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~gggtDa~~~~~~v~-----~G~~f--Pg~~~~~H~ 464 (492)
T 3khx_A 398 VKLGK----VQPPHYVDKNDPFVQKLVTAYRNQTNDMT--EPYTIGGGTYARNLDKGVA-----FGAMF--SDSEDLMHQ 464 (492)
T ss_dssp EEEEE----EECCBCCGGGCHHHHHHHHHHHTTCC--------------------------------------------C
T ss_pred EEEec----cCCceecCCCcHHHHHHHHHHHHHhCCCC--eEEeeehhHHHHHhhCceE-----ECCcC--CCCCCCCCC
Confidence 66643 2333 34578899999999999888876 3467899999999986433 45444 666678999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 403 PYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 403 ~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
+|||++++++.+++++|++++.+++..
T Consensus 465 ~dE~v~i~~l~~~~~i~~~~l~~l~~~ 491 (492)
T 3khx_A 465 KNEYITKKQLFNATSIYLEAIYSLCVE 491 (492)
T ss_dssp CSCEEEHHHHHHHHHHHHHHHHHHHTT
T ss_pred CccCcCHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999753
No 20
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=1.3e-48 Score=396.21 Aligned_cols=346 Identities=15% Similarity=0.111 Sum_probs=281.1
Q ss_pred HHHHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhCCCC-eeeccCCceEEEEEcCC---CCcEEEEEEecc
Q 013332 50 YWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG---QPPFVALRADMD 115 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~----------~E~~~a~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~---~~p~i~l~~H~D 115 (445)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++++ ..+||++++++. .+|+|+|+||||
T Consensus 27 ~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d-~~~nv~a~~~g~~~~~~~~v~l~~H~D 105 (434)
T 3ife_A 27 EELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMD-DNGYVMATLPANTDKDVPVIGFLAHLD 105 (434)
T ss_dssp HHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTSCEEEEECCBSSSCCCCEEEEEECC
T ss_pred HHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEEC-CCcEEEEEeCCCCCCCCCeEEEEEEcc
Confidence 789999999999999998 5789999999999999997 7764 478999999653 258999999999
Q ss_pred cccCCCCCCCcccc----CCC----------------------------CccccCcc-------hHHHHHHHHHHHHHHh
Q 013332 116 ALAMEESVEWEHKS----KVP----------------------------GKMHACGH-------DAHVAMLLGAAKMLQV 156 (445)
Q Consensus 116 tVp~~~~~~w~~~~----~~~----------------------------g~l~GrG~-------kg~~aa~l~a~~~l~~ 156 (445)
|||..+ .|+++. ..| |+|||||+ |++++++|+|++.|++
T Consensus 106 tVp~~~--~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~ 183 (434)
T 3ife_A 106 TATDFT--GKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIH 183 (434)
T ss_dssp BCTTSC--CSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCC--CCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHh
Confidence 999743 675541 112 58999995 8999999999999999
Q ss_pred ccccCCceEEEEEeecCCCCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-C
Q 013332 157 FRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-I 235 (445)
Q Consensus 157 ~~~~l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~ 235 (445)
.+..++++|.|+|++|||++.|++.+.... + ++|++++.|+ .+.|.+.+ +++|..+++|+++|+++||| .
T Consensus 184 ~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~-~-~~d~~~~~d~---~~~g~i~~----~~~G~~~~~i~v~G~~~Hag~~ 254 (434)
T 3ife_A 184 NPQIKHGKIRVAFTPDEEIGRGPAHFDVEA-F-GASFAYMMDG---GPLGGLEY----ESFNAAGAKLTFNGTNTHPGTA 254 (434)
T ss_dssp CTTSCBCCEEEEEESCGGGTCTGGGCCHHH-H-CCSEEEECCC---CSTTEEEC----CBCEEEEEEEEEECBCCCGGGC
T ss_pred CCCCCCCCEEEEEECCcccChHHHHhhhhh-c-CCCEEEEecC---CCCCceee----cCCCeEEEEEEEEEEecCCCCC
Confidence 877889999999999999668988875433 2 5789998774 23455543 46899999999999999988 7
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHH
Q 013332 236 PQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVM 315 (445)
Q Consensus 236 p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~ 315 (445)
|+.|+|||..+++++..|+.+.... ..+.+++.+++| ..|+||++|++++|+|+.+.++.+++.++|++ +++
T Consensus 255 P~~g~nAi~~aa~~i~~l~~~~~~~-----~~~~~~g~i~~g-~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~--~~~ 326 (434)
T 3ife_A 255 KNKMRNATKLAMEFNGHLPVEEAPE-----YTEGYEGFYHLL-SLNGDVEQSKAYYIIRDFDRKNFEARKNTIEN--IVK 326 (434)
T ss_dssp TTTCBCHHHHHHHHHHTSCTTCSGG-----GCCTTCCEEEEE-EEEECSSEEEEEEEEEESSHHHHHHHHHHHHH--HHH
T ss_pred cccchhHHHHHHHHHHhcccccCCC-----cceeeeEEEEee-eEeEecCeEEEEEEEecCCHHHHHHHHHHHHH--HHH
Confidence 9999999999999999988752111 122233444544 37899999999999999999999999999999 999
Q ss_pred HHHHhhC-CeEEEEecccCCCCc----ccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecC
Q 013332 316 KQASVQR-CNATVTFDDKSFYPV----TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGM 389 (445)
Q Consensus 316 ~~~~~~~-~~~~i~~~~~~~~~~----~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~ 389 (445)
+.+..++ +++++++ ...+++ ..+|+++++.+++++++ +|.++. ....+|++|+++|.+. +|++++ |
T Consensus 327 ~~~~~~g~~~~~v~~--~~~~~~~~~~~~~d~~l~~~~~~a~~~-~G~~~~--~~~~~ggtD~~~~~~~GiP~~~~--g- 398 (434)
T 3ife_A 327 QMQEKYGQDAVVLEM--NDQYYNMLEKIEPVREIVDIAYEAMKS-LNIEPN--IHPIRGGTDGSQLSYMGLPTPNI--F- 398 (434)
T ss_dssp HHHHHHCGGGEEEEE--EEEECCTHHHHGGGTHHHHHHHHHHHH-TTCCCE--ECCBSSCCHHHHHHHTTCCCCEE--C-
T ss_pred HHHHhcCCceEEEEE--eecccchhccccCCHHHHHHHHHHHHH-hCCCCE--EeecccCchHHHHhhCCCcEEEe--C-
Confidence 8877777 5566655 333333 46788999999999999 487653 3567899999999988 998764 5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 390 NDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 390 ~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
||. ..+|++||++++++|.+++++|++++.++.+
T Consensus 399 ----~g~-~~~H~~~E~i~~~~l~~~~~~~~~~l~~la~ 432 (434)
T 3ife_A 399 ----TGG-ENYHGKFEYVSVDVMEKAVQVIIEIARRFEE 432 (434)
T ss_dssp ----CSE-ESTTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCC-CCCcCCceeecHHHHHHHHHHHHHHHHHHhh
Confidence 332 3699999999999999999999999998865
No 21
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=1.8e-47 Score=386.21 Aligned_cols=347 Identities=14% Similarity=0.124 Sum_probs=283.8
Q ss_pred HHHHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhCCCC-eeeccCCceEEEEEcCC---CCcEEEEEEecc
Q 013332 50 YWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG---QPPFVALRADMD 115 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~----------~E~~~a~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~---~~p~i~l~~H~D 115 (445)
+++++++++|++|||+|+ +|.++++||+++|+++|++ ++.+ ..+|++++++++ ++|+|+|+||||
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~g~~~~~~~~i~l~aH~D 80 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLS-EKGTLMATLPANVEGDIPAIGFISHVD 80 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTCCEEEEECCSSCSCCCCEEEEEECC
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEEC-CCceEEEEECCCCCCCCCceEEEEecc
Confidence 347899999999999998 7899999999999999998 7654 468999999653 358999999999
Q ss_pred cccCCCCCCCccc--------cC-----------------------CCCccccCc-----c--hHHHHHHHHHHHHHHhc
Q 013332 116 ALAMEESVEWEHK--------SK-----------------------VPGKMHACG-----H--DAHVAMLLGAAKMLQVF 157 (445)
Q Consensus 116 tVp~~~~~~w~~~--------~~-----------------------~~g~l~GrG-----~--kg~~aa~l~a~~~l~~~ 157 (445)
|||.++ .|.++ .. .||+||||| + |++++++|++++.|++.
T Consensus 81 ~Vp~~~--~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~ 158 (417)
T 1fno_A 81 TSPDFS--GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGN 158 (417)
T ss_dssp BCTTSC--CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCC--CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhC
Confidence 999876 46432 11 356899999 5 69999999999999998
Q ss_pred cccCCceEEEEEeecCCCCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCcccccceEEEEEEEecCCCCC-CC
Q 013332 158 RHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IP 236 (445)
Q Consensus 158 ~~~l~~~i~~i~~~dEEg~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has-~p 236 (445)
+ .++++|+|+|+++||.+.|++.+++++. .+|+++.+++ .|.|.+. .+++|..+++|+++|+++|+| .|
T Consensus 159 ~-~~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d~---~~~g~i~----~~~~g~~~~~i~~~G~~~Hs~~~p 228 (417)
T 1fno_A 159 P-IPHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVDG---GGVGELE----FENFNAASVNIKIVGNNVHPGTAK 228 (417)
T ss_dssp S-CCCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECCC---CSTTBEE----CCBCEEEEEEEEEECBCCCGGGCT
T ss_pred C-CCCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeCC---CCcCeeE----EecCCceeEEEEEEeeccCCCCCc
Confidence 7 7889999999999995588888775543 4677777553 2556653 346899999999999999999 79
Q ss_pred CCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHH
Q 013332 237 QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMK 316 (445)
Q Consensus 237 ~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~ 316 (445)
+.|.|||..+++++..|+.+..+........+++++.|+|| |++|++.+|+|+.+.++.+.+.++|++ +++.
T Consensus 229 ~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG------p~~a~~~~d~R~~~~~~~~~~~~~i~~--~~~~ 300 (417)
T 1fno_A 229 GVMVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGT------VDRAEMHYIIRDFDRKQFEARKRKMME--IAKK 300 (417)
T ss_dssp TTCBCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEEC------SSEEEEEEEEEESSHHHHHHHHHHHHH--HHHH
T ss_pred cccCCHHHHHHHHHHhhhccCCcccccccccEEEEEEEeec------cCeEEEEEEEeCCCHHHHHHHHHHHHH--HHHH
Confidence 99999999999999999876433323334568999999998 999999999999999999999999999 9988
Q ss_pred HHHhhCCe--EEEEecccCCCCc----ccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecC
Q 013332 317 QASVQRCN--ATVTFDDKSFYPV----TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGM 389 (445)
Q Consensus 317 ~~~~~~~~--~~i~~~~~~~~~~----~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~ 389 (445)
.+..++.. +++++ ...+++ ..+|+++++.+++++++. |.++. ....+|++|+++|... +|++. +|+
T Consensus 301 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~ggtD~~~~~~~gip~v~--~G~ 373 (417)
T 1fno_A 301 VGKGLHPDCYIELVI--EDSYYNMREKVVEHPHILDIAQQAMRDC-HITPE--MKPIRGGTDGAQLSFMGLPCPN--LFT 373 (417)
T ss_dssp HTTTCCTTCCEEEEE--EEEECCCHHHHHTSTHHHHHHHHHHHHT-TCCCB--CCCBSSCCHHHHHTTTTCCCCE--ECC
T ss_pred HHHHcCCCceEEEEE--eccccchhccccCCCHHHHHHHHHHHHc-CCCce--eccceeccchHhHHhcCCCEEE--EcC
Confidence 77666643 66655 333333 357889999999999994 88753 3568899999999987 99875 563
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhc
Q 013332 390 NDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLEN 430 (445)
Q Consensus 390 ~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~~ 430 (445)
|. ..+|++||+++++++..++++|+.++.+++...
T Consensus 374 -----~~-~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~~ 408 (417)
T 1fno_A 374 -----GG-YNYHGKHEFVTLEGMEKAVQVIVRIAELTAKRG 408 (417)
T ss_dssp -----SE-ESTTSTTCEEEHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -----CC-CCCCCcccccCHHHHHHHHHHHHHHHHHHHhcC
Confidence 32 248999999999999999999999999998653
No 22
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=9.6e-47 Score=381.60 Aligned_cols=352 Identities=16% Similarity=0.129 Sum_probs=288.1
Q ss_pred hhcCchhHHHHHHHHHHHHhCCCCC----------cchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC-C-CcEEE
Q 013332 42 FAKKPEIFYWMVNIRRKIHENPELG----------FQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVA 109 (445)
Q Consensus 42 ~~~~~~~~~~~~~ll~~l~~ips~s----------~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~p~i~ 109 (445)
+++.+. +++++++++|++|||+| ++|.++++||.++|+++|++++.+. .+|++++++++ + +|+|+
T Consensus 3 ~~~~~~--~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~-~gnv~a~~~g~~~~~~~i~ 79 (423)
T 1z2l_A 3 LITHFR--QAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDE-VGNLYGRLNGTEYPQEVVL 79 (423)
T ss_dssp CHHHHH--HHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECT-TSCEEEEECCSSEEEEEEE
T ss_pred cccccH--HHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEec-CCcEEEEEcCCCCCCCEEE
Confidence 344445 78999999999999998 6899999999999999999987643 46999999654 2 38999
Q ss_pred EEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCC------ccHHHHH
Q 013332 110 LRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKML 183 (445)
Q Consensus 110 l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~l~ 183 (445)
|++||||||.+. | . ..|++++++|++++.|++.+.+++++|+|+|+++||++ .|++.+.
T Consensus 80 l~~H~D~Vp~~g---~-----~-------D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~ 144 (423)
T 1z2l_A 80 SGSHIDTVVNGG---N-----L-------DGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIF 144 (423)
T ss_dssp EEEECCCCTTBC---S-----S-------TTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHT
T ss_pred EEEecCCCCCCC---c-----c-------CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHH
Confidence 999999999752 2 1 22578999999999999988789999999999999953 3888887
Q ss_pred H----cc--------------------CC---------CCcceeEEecccCC---CCCCc-eeeccCcccccceEEEEEE
Q 013332 184 D----AG--------------------AL---------ENVEAIFGLHVSSL---FPVGT-VASRPGPTLAAGGFFEAVI 226 (445)
Q Consensus 184 ~----~~--------------------~~---------~~~d~~i~~~~~~~---~p~g~-~~~~~g~~~~G~~~~~i~~ 226 (445)
. ++ .. .+.|+++.+|..++ ++++. ..+ ..+++|..+++|++
T Consensus 145 ~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~--~~~~~g~~~~~i~v 222 (423)
T 1z2l_A 145 GLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGV--VNAIVGQRRYTVTL 222 (423)
T ss_dssp TCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEE--EEEECEEEEEEEEE
T ss_pred cCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEE--EeeEecceEEEEEE
Confidence 5 22 11 13567787776543 12221 111 12467999999999
Q ss_pred EecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHH
Q 013332 227 NGKGGHAA-IPQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQ 303 (445)
Q Consensus 227 ~G~~~Has-~p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~ 303 (445)
+|+++||| .|+ .|.|||..+++++..|+++..+. ++ ..+++++.|+|| .+.|+||++|++.+|+|+.+.++.++
T Consensus 223 ~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~~-~~--~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~ 299 (423)
T 1z2l_A 223 NGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRM-GD--PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRD 299 (423)
T ss_dssp ECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHHH-CT--TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHH
T ss_pred EeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHhc-CC--CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHH
Confidence 99999999 796 89999999999999998875432 22 578999999987 89999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeE
Q 013332 304 LKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY 383 (445)
Q Consensus 304 v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~ 383 (445)
+.++|++ +++..+..++++++++. ...+|++.+|+++++.++++++++ |.++. ....+|++|+++|.+.+|++
T Consensus 300 i~~~i~~--~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~ggtD~~~~~~~~p~~ 372 (423)
T 1z2l_A 300 FTQQLEN--DMRAICDEMDIGIDIDL--WMDEEPVPMNKELVATLTELCERE-KLNYR--VMHSGAGHDAQIFAPRVPTC 372 (423)
T ss_dssp HHHHHHH--HHHHHHHHHTCEEEEEE--EEEECCEECCHHHHHHHHHHHHHT-TCCEE--EEEESSCCTHHHHTTTSCEE
T ss_pred HHHHHHH--HHHHHHHHhCCeEEEEE--ecCCCCccCCHHHHHHHHHHHHHc-CCCeE--EecCCCcccHHHHHhhCCEE
Confidence 9999999 99888777888888876 556788888999999999999998 87653 34688999999999889986
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 384 FYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 384 ~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
++ || |+....+|++||+++++++.+++++|++++.+++.+
T Consensus 373 ~~-~~-----p~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~ 412 (423)
T 1z2l_A 373 MI-FI-----PSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQ 412 (423)
T ss_dssp EE-EE-----CCGGGCCSSTTCCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred EE-Ee-----CCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHhh
Confidence 54 45 333346999999999999999999999999999865
No 23
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=9.3e-46 Score=372.54 Aligned_cols=343 Identities=18% Similarity=0.172 Sum_probs=284.9
Q ss_pred HHHHHHHHHHHhCCCC----------CcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC-C-CcEEEEEEecccc
Q 013332 50 YWMVNIRRKIHENPEL----------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDAL 117 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~----------s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~p~i~l~~H~DtV 117 (445)
+++++++++|++|||. |++|.++++||.++|+++|++++.+. .+|++++++++ + +|+|+|.+|||||
T Consensus 5 ~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~-~gnv~a~~~g~~~~~~~i~l~aH~D~v 83 (408)
T 3n5f_A 5 ERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDA-AGNLIGRKEGTNPDATVVLVGSHLDSV 83 (408)
T ss_dssp HHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECT-TCCEEEEECCSSTTSCEEEEEEESCCC
T ss_pred HHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcC-CCCEEEEecCCCCCCCEEEEEecCCCC
Confidence 6789999999999993 78999999999999999999988743 56999999654 3 6999999999999
Q ss_pred cCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCC------ccHHHHHH-------
Q 013332 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLD------- 184 (445)
Q Consensus 118 p~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~l~~------- 184 (445)
|.+. . ...|++++++|.+++.|++.+..++++|.|+|+++||++ .|++.++.
T Consensus 84 ~~~g------------~---~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 148 (408)
T 3n5f_A 84 YNGG------------C---FDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEAL 148 (408)
T ss_dssp TTBC------------S---STTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGG
T ss_pred CCCC------------c---cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHh
Confidence 9642 1 123578999999999999988789999999999999942 48998872
Q ss_pred ----------------ccC----C-----C--CcceeEEecccCC---CCCC-ceeeccCcccccceEEEEEEEecCCCC
Q 013332 185 ----------------AGA----L-----E--NVEAIFGLHVSSL---FPVG-TVASRPGPTLAAGGFFEAVINGKGGHA 233 (445)
Q Consensus 185 ----------------~~~----~-----~--~~d~~i~~~~~~~---~p~g-~~~~~~g~~~~G~~~~~i~~~G~~~Ha 233 (445)
.|+ + + ++|+++.+|+.++ ++.+ .+.+. .+++|..+++|+++|+++|+
T Consensus 149 ~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~--~~~~g~~~~~i~v~G~~~Ha 226 (408)
T 3n5f_A 149 ECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIV--TGIAGLIWVKFTIEGKAEHA 226 (408)
T ss_dssp SCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEE--EEECEEEEEEEEEECCCEET
T ss_pred hccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEE--EEeccceEEEEEEEEEcCcC
Confidence 221 1 1 5678888887554 1111 11111 24689999999999999999
Q ss_pred -CCC-CCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHHHHHHHHh
Q 013332 234 -AIP-QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEE 310 (445)
Q Consensus 234 -s~p-~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~ 310 (445)
+.| +.|.|||..+++++.+|+.+. +..+ ..+++++.|+|| .+.|+||++|++.+|+|+.+.++.+.+.++|++
T Consensus 227 gs~P~~~g~nAi~~aa~~i~~l~~~~-~~~~---~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~ 302 (408)
T 3n5f_A 227 GATPMSLRRDPMAAAAQIIIVIEEEA-RRTG---TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAV 302 (408)
T ss_dssp TTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS---SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCccccccCHHHHHHHHHHHHHHHH-HhcC---CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHH
Confidence 589 589999999999999999876 3222 689999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCC
Q 013332 311 WQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMN 390 (445)
Q Consensus 311 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~ 390 (445)
+++..+..+++++++++ ...+|++.+|+++++.++++++++ |.++. .....|++|+++|.+.+|+++++.|..
T Consensus 303 --~~~~~a~~~g~~~~i~~--~~~~p~~~~d~~l~~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~iP~~~~~~~~~ 375 (408)
T 3n5f_A 303 --RAETIAKERNVRVTTER--LQEMPPVLCSDEVKRAAEAACQKL-GYPSF--WLPSGAAHDSVQLAPICPIGMIFVRSQ 375 (408)
T ss_dssp --HHHHHHHHHTCEEEEEE--EEEECCEECCHHHHHHHHHHHHHH-TCCCC--EEEESSCCTTTTTTTTSCEEEEEECCG
T ss_pred --HHHHHHHHhCCeEEEEE--ecCCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCCcCchHHHHHHHHCCEEEEEeCCC
Confidence 99988888899998887 667888888999999999999998 87653 235778999999998899976654532
Q ss_pred CCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 391 DETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 391 ~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
...+|++||++++++|..++++|+.++.++.
T Consensus 376 ------~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 406 (408)
T 3n5f_A 376 ------DGVSHSPAEWSTKEDCAAGAEVLYHTVWQLA 406 (408)
T ss_dssp ------GGCCSSTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred ------CCCCCCccccCCHHHHHHHHHHHHHHHHHHh
Confidence 2459999999999999999999999998875
No 24
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=2.1e-46 Score=383.90 Aligned_cols=346 Identities=14% Similarity=0.073 Sum_probs=283.2
Q ss_pred HHHHHHHHHH-HhCCCC-----------------CcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC-CCcEEEE
Q 013332 50 YWMVNIRRKI-HENPEL-----------------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVAL 110 (445)
Q Consensus 50 ~~~~~ll~~l-~~ips~-----------------s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~p~i~l 110 (445)
+++++++++| ++|||+ +++|.++++||.++|+++|++++++ ..+|+++++++. ++|+|+|
T Consensus 32 ~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d-~~gnvia~~~g~~~~~~i~l 110 (474)
T 2v8h_A 32 GRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVD-KIGNMFAVYPGKNGGKPTAT 110 (474)
T ss_dssp THHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEB-TTCCEEEEECCSSCCSCEEE
T ss_pred HHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEe-cCceEEEEECCCCCCCeEEE
Confidence 7799999999 999987 3678999999999999999998864 457999999653 4579999
Q ss_pred EEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeecCCCC------ccHHHHHH
Q 013332 111 RADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLD 184 (445)
Q Consensus 111 ~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg~------~G~~~l~~ 184 (445)
+|||||||.++ | | ..|++++++|+|++.|++.+.+++++|.|+|++|||++ .|++.+.+
T Consensus 111 ~~H~DtVp~~g---~----------~--D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 111 GSHLDTQPEAG---K----------Y--DGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECCCCCSSBC---S----------S--TTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEecccCCCCC---C----------c--CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 99999999852 4 1 44689999999999999988888999999999999952 38888854
Q ss_pred ---------------------------ccCC---------CCcceeEEecccCCCCCCce--eeccCcccccceEEEEEE
Q 013332 185 ---------------------------AGAL---------ENVEAIFGLHVSSLFPVGTV--ASRPGPTLAAGGFFEAVI 226 (445)
Q Consensus 185 ---------------------------~~~~---------~~~d~~i~~~~~~~~p~g~~--~~~~g~~~~G~~~~~i~~ 226 (445)
.|+. .++++.+.+|..++...+.. ......+++|..+++|++
T Consensus 176 ~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v 255 (474)
T 2v8h_A 176 DLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTV 255 (474)
T ss_dssp SSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEE
T ss_pred ccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEE
Confidence 1221 24667787776543211100 001112457999999999
Q ss_pred EecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcC-CccccccCcEEEEEEEecCChhhHHH
Q 013332 227 NGKGGHAA-IPQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQ 303 (445)
Q Consensus 227 ~G~~~Has-~p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~NviP~~a~~~~diR~~~~~~~~~ 303 (445)
+|+++||| .|+ .|.|||..+++++..|+.+..+. ..+++++.|+|| .+.|+||++|++.+|+|+++.++.++
T Consensus 256 ~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-----~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~ 330 (474)
T 2v8h_A 256 HGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-----NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVLAT 330 (474)
T ss_dssp ECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-----TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHHHH
T ss_pred EeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-----CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHHHH
Confidence 99999999 597 89999999999999998875432 579999999998 89999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHh---hCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcC-C-cccccCCCCCccchHHHHHh
Q 013332 304 LKQRIEEWQVVMKQASV---QRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLG-V-QNIKENRPLMGTEDFSFFAE 378 (445)
Q Consensus 304 v~~~i~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g-~-~~~~~~~~~~g~tD~~~~~~ 378 (445)
+.++|++ +++..+.. ++++++++. ...+|++.+|+++++.++++++++ | . ++. ....+|++|+++|.+
T Consensus 331 i~~~i~~--~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~d~~l~~~~~~a~~~~-G~~~~~~--~~~~~ggtD~~~~~~ 403 (474)
T 2v8h_A 331 MLKEAAA--EFDRLIKINDGGALSYESET--LQVSPAVNFHEVCIECVSRSAFAQ-FKKDQVR--QIWSGAGHDSCQTAP 403 (474)
T ss_dssp HHHHHHH--HHHHHTTCCTTCCCEEEEEE--EEEECCEECCHHHHHHHHHHHHHH-SCGGGEE--EEEESSCCTHHHHTT
T ss_pred HHHHHHH--HHHHHHhhcccCCcEEEEEE--ecCCCCccCCHHHHHHHHHHHHHc-CCCCcce--ecCCcCCccHHHHHh
Confidence 9999999 99877665 678877776 556778888999999999999998 8 6 543 346889999999998
Q ss_pred hcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 379 AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 379 ~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
.+|+++. || |+....+|++||+++++++.+++++|++++.+++..
T Consensus 404 ~~P~~~~-fg-----p~~~~~~H~p~E~i~~~~l~~~~~~~~~~l~~l~~~ 448 (474)
T 2v8h_A 404 HVPTSMI-FI-----PSKDGLSHNYYEYSSPEEIENGFKVLLQAIINYDNY 448 (474)
T ss_dssp TSCEEEE-EE-----CCGGGCCSSTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCEEEE-Ee-----CCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 8998543 45 333356999999999999999999999999998864
No 25
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=1.1e-45 Score=380.08 Aligned_cols=346 Identities=17% Similarity=0.171 Sum_probs=272.2
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC----CCcEEEEEEecccccCCCCC--
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEESV-- 123 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~----~~p~i~l~~H~DtVp~~~~~-- 123 (445)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. .+|+++++++. ++|+|+|++||||||.++..
T Consensus 11 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~ 89 (487)
T 2qyv_A 11 KLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDE-VGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTN 89 (487)
T ss_dssp HHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTBCCEEEEEESCBCCC------
T ss_pred HHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCc
Confidence 779999999999999999999999999999999999987653 57999999642 35899999999999998754
Q ss_pred -CCc---cc-cCCCCccccCcc----h--HHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCc
Q 013332 124 -EWE---HK-SKVPGKMHACGH----D--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (445)
Q Consensus 124 -~w~---~~-~~~~g~l~GrG~----k--g~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~ 191 (445)
+|. |. .++||+|||||+ | ++++++|.+++ +.+ .++++|.|+|+++|| ++.|++.+++++ + .+
T Consensus 90 ~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~---~~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~~ 163 (487)
T 2qyv_A 90 HNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLE---SND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L-RS 163 (487)
T ss_dssp ----CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHH---CSS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C-CC
T ss_pred cccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHH---hCC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c-CC
Confidence 674 44 357899999998 3 88888888875 333 477999999999999 568999988765 3 36
Q ss_pred ceeEEecccCCCCCCceee--ccC------------cccccceEEEEEEEe-cCCCCCCC-CCC-CCHHHHHHHHHHHHH
Q 013332 192 EAIFGLHVSSLFPVGTVAS--RPG------------PTLAAGGFFEAVING-KGGHAAIP-QHT-IDPIVAASNVIVSLQ 254 (445)
Q Consensus 192 d~~i~~~~~~~~p~g~~~~--~~g------------~~~~G~~~~~i~~~G-~~~Has~p-~~g-~NAi~~~~~~i~~l~ 254 (445)
|+++..++. +.+.+.+ +.+ ..++| .+++|+++| +++|||.| +.| .|||..+++++..|+
T Consensus 164 d~~~~~d~~---~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~ 239 (487)
T 2qyv_A 164 EILINTDTE---ENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQ 239 (487)
T ss_dssp SEEEECCCC---CTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHH
T ss_pred CEEEEEccC---CCCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHh
Confidence 888765542 2233322 111 13456 889999999 89999976 776 799999999999998
Q ss_pred HhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEE----------------------------------------e
Q 013332 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTF----------------------------------------R 294 (445)
Q Consensus 255 ~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~di----------------------------------------R 294 (445)
.+. ...+++++.|+||.+.|+||++|++.+++ |
T Consensus 240 ~~~-------~~~~~~v~~i~gG~~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 312 (487)
T 2qyv_A 240 QNQ-------PHFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQ 312 (487)
T ss_dssp HHC-------TTCCEEEEEEEEESCTTBCCCCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSE
T ss_pred hcc-------CCCcEEEEEEeCCCcCcccCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecccccc
Confidence 863 13579999999999999999999999999 8
Q ss_pred cCChhhHHHHHHHHHhHHHH---------------------------------------------------HHHHHhhCC
Q 013332 295 AFSKESIIQLKQRIEEWQVV---------------------------------------------------MKQASVQRC 323 (445)
Q Consensus 295 ~~~~~~~~~v~~~i~~~~~~---------------------------------------------------~~~~~~~~~ 323 (445)
+.+.++.+.+.+.|++ ++ +..+..+++
T Consensus 313 ~~~~~~~~~i~~~i~~--~~~gv~~~~~~~~~~~~~s~nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~ 390 (487)
T 2qyv_A 313 VFSSQCTKNIIHCLNV--LPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQG 390 (487)
T ss_dssp EECHHHHHHHHHHHHH--SCCEEEEECSSSTTCEEEEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHh--CCCcceeeccccCCceEeccceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCc
Confidence 8888888888887766 53 334555677
Q ss_pred eEEEEecccCCCCccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeE-EEEecCCCCCCCCCCCC
Q 013332 324 NATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETG 400 (445)
Q Consensus 324 ~~~i~~~~~~~~~~~~--~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~G~~~~~pG~~~~~ 400 (445)
++++.. .+|++. .|+++++.+.+++++++|.++. ....+|++|+++|.+.+|.+ ++.||+ +. ..+
T Consensus 391 ~~~~~~----~~p~~~~~~d~~l~~~~~~~~~~~~G~~~~--~~~~~gg~D~~~~~~~~pg~~~v~~Gp-----~~-~~~ 458 (487)
T 2qyv_A 391 NINLSG----DYPGWEPQSHSDILDLTKTIYAQVLGTDPE--IKVIHAGLECGLLKKIYPTIDMVSIGP-----TI-RNA 458 (487)
T ss_dssp EEEEEE----EECCBCCCSCCHHHHHHHHHHHHHHSSCCE--EEEESSCCTHHHHHHHCTTSEEEECCC-----CE-EST
T ss_pred eEEECC----CCCCCCCCCCCHHHHHHHHHHHHHhCCCCe--EEEEeccccHHHHHhhCCCCCEEEECC-----CC-CCC
Confidence 766543 456654 4788999999999998898763 34688999999999875543 345784 32 469
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 401 HSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 401 H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
|+|||+++++++.+++++|+.++.+++
T Consensus 459 H~~~E~v~~~~l~~~~~~~~~~l~~l~ 485 (487)
T 2qyv_A 459 HSPDEKVHIPAVETYWKVLTGILAHIP 485 (487)
T ss_dssp TSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998875
No 26
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=9.8e-46 Score=379.97 Aligned_cols=344 Identities=16% Similarity=0.133 Sum_probs=268.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC----CCcEEEEEEecccccCCCCC--
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEESV-- 123 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~----~~p~i~l~~H~DtVp~~~~~-- 123 (445)
+++++++++|++|||+|++|.++++||.++|+++|++++.+ ..+|+++++++. ++|+|+|.|||||||.++..
T Consensus 14 ~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~-~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~ 92 (490)
T 3mru_A 14 APLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRD-PTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTD 92 (490)
T ss_dssp HHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEEC-TTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSC
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEc-CCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcc
Confidence 77999999999999999999999999999999999998864 367999999642 46899999999999998643
Q ss_pred -CCcc---c-cCCCCccccCcc----h--HHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCc
Q 013332 124 -EWEH---K-SKVPGKMHACGH----D--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (445)
Q Consensus 124 -~w~~---~-~~~~g~l~GrG~----k--g~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~ 191 (445)
+|.. . .++||++||||+ | +++|++|+++ ++. ..++++|.|+|++||| ++.|++.+++.. + +.
T Consensus 93 ~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~~-~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~~ 166 (490)
T 3mru_A 93 HDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---ASK-EIKHGPIEVLLTIDEEAGMTGAFGLEAGW-L-KG 166 (490)
T ss_dssp CCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HCS-SCCCCSEEEEEESCSSSTTGGGGTCCSSS-C-CS
T ss_pred cccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---HhC-CCCCCCEEEEEEcccccccHhHHHhhhcc-c-CC
Confidence 6853 3 467899999998 3 6777777655 332 3568999999999999 568999987653 3 46
Q ss_pred ceeEEecccCCCCCCceee--------------ccCcccccceEEEEEEEe-cCCCCC-CCCCCC-CHHHHHHHHHHHHH
Q 013332 192 EAIFGLHVSSLFPVGTVAS--------------RPGPTLAAGGFFEAVING-KGGHAA-IPQHTI-DPIVAASNVIVSLQ 254 (445)
Q Consensus 192 d~~i~~~~~~~~p~g~~~~--------------~~g~~~~G~~~~~i~~~G-~~~Has-~p~~g~-NAi~~~~~~i~~l~ 254 (445)
|+++.+++. +.|.+.. ....+++|..+++|+++| +++||| .|+.|+ |||..+++++..|+
T Consensus 167 ~~~~~~d~~---~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~ 243 (490)
T 3mru_A 167 DILLNTDSE---QEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHA 243 (490)
T ss_dssp SEEEECCCC---CTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHT
T ss_pred CEEEEcCCC---CCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHH
Confidence 777776532 2222210 002456899999999999 999999 599999 99999999999987
Q ss_pred HhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHH----------------
Q 013332 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQA---------------- 318 (445)
Q Consensus 255 ~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~---------------- 318 (445)
+. .+++++.|+||.+.|+||++|++.+++|..+.+..+++.+++.+ .++...
T Consensus 244 ~~----------~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~ 311 (490)
T 3mru_A 244 QE----------LDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTE--LLKTELGKIETDIVTFNEEVAT 311 (490)
T ss_dssp TT----------TTCEEEEEEECSCTTEECCCEEEEEEEEGGGHHHHHHHHHHHHH--HHHHHHTTTCCCCEEEEEECCC
T ss_pred hc----------CcEEEEEEECCCCCcccCCccEEEEEECcccHHHHHHHHHHHHH--HHHHHhhccCCCeEEEEEecCC
Confidence 62 35889999999999999999999999987766666666555554 443221
Q ss_pred ----------------------------------------------------------------------------HhhC
Q 013332 319 ----------------------------------------------------------------------------SVQR 322 (445)
Q Consensus 319 ----------------------------------------------------------------------------~~~~ 322 (445)
...+
T Consensus 312 ~~~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g 391 (490)
T 3mru_A 312 DAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAG 391 (490)
T ss_dssp CCCEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTT
T ss_pred ccccCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcC
Confidence 1223
Q ss_pred CeEEEEecccCCCCccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeE-EEEecCCCCCCCCCCC
Q 013332 323 CNATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFET 399 (445)
Q Consensus 323 ~~~~i~~~~~~~~~~~~--~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~G~~~~~pG~~~~ 399 (445)
.++++ ...+|++. .|+++++.+.+++++++|.++. ....+|++|+++|.+.+|.+ +..|||.. ..
T Consensus 392 ~~~~~----~~~~p~~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~ggg~d~~~~~~~~p~~~~v~fGp~~------~~ 459 (490)
T 3mru_A 392 AQIEF----SGAYPGWKPDADSEIMAIFRDMYEGIYGHKPN--IMVIHAGLECGLFKEPYPNMDMVSFGPTI------KF 459 (490)
T ss_dssp CEEEE----EEEECCBCCCTTCHHHHHHHHHHHTTSSSCCC--CEEESSCCHHHHTTSSCTTCEEEECCCCE------ES
T ss_pred CeEEe----cCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEecHHHHHHHHhCCCCCEEEECCCC------CC
Confidence 33333 23566664 4678999999999999998763 45789999999999987752 34578543 35
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 400 GHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 400 ~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
+|+|||+++++++.+++++|.+++.++.
T Consensus 460 ~H~p~E~v~i~~l~~~~~~l~~~l~~l~ 487 (490)
T 3mru_A 460 PHSPDEKVKIDTVQLFWDQMVALLEAIP 487 (490)
T ss_dssp TTSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCccccHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999988763
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=4.2e-45 Score=374.47 Aligned_cols=360 Identities=15% Similarity=0.094 Sum_probs=276.6
Q ss_pred HHHhhcCchhHHHHHHHHHHHHhCCCCCcch------------HHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCc
Q 013332 39 FLDFAKKPEIFYWMVNIRRKIHENPELGFQE------------FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPP 106 (445)
Q Consensus 39 ~~~~~~~~~~~~~~~~ll~~l~~ips~s~~E------------~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p 106 (445)
+.+++++++ +++++++++|++|||+|++| .++++||.++|+++||+++.. +..++++.++.+ +|
T Consensus 5 ~~~~~~~~~--~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g~~-~~ 80 (470)
T 1lfw_A 5 FKELAEAKK--DAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFGAG-DK 80 (470)
T ss_dssp HHHHHHTTH--HHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEECCC-SS
T ss_pred HHHHHHHhH--HHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeCCC-CC
Confidence 677888877 99999999999999999876 789999999999999998764 346788888433 58
Q ss_pred EEEEEEecccccCCCCCCC---cccc-C-CCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCc
Q 013332 107 FVALRADMDALAMEESVEW---EHKS-K-VPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (445)
Q Consensus 107 ~i~l~~H~DtVp~~~~~~w---~~~~-~-~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~ 177 (445)
+|+|++||||||+++ +| ||.. + +||+|||||+ |++++++|+|++.|++.+.+++++|+|+|+++|| ++.
T Consensus 81 ~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~ 158 (470)
T 1lfw_A 81 RLGIIGHMDVVPAGE--GWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWV 158 (470)
T ss_dssp EEEEEEECCBCCCCS--CCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCH
T ss_pred eEEEEEeecccCCCC--CccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCc
Confidence 999999999999876 67 4553 4 7999999996 7999999999999999887889999999999999 568
Q ss_pred cHHHHHHccCCCC----cce----eEEeccc-------CCCC-CCce---eeccC--------c----------------
Q 013332 178 GAKKMLDAGALEN----VEA----IFGLHVS-------SLFP-VGTV---ASRPG--------P---------------- 214 (445)
Q Consensus 178 G~~~l~~~~~~~~----~d~----~i~~~~~-------~~~p-~g~~---~~~~g--------~---------------- 214 (445)
|++.+++++.... .|. +++.+.. .+.+ .|.+ ....| .
T Consensus 159 G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~ 238 (470)
T 1lfw_A 159 GIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLA 238 (470)
T ss_dssp HHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHH
T ss_pred cHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHH
Confidence 9999998754211 222 2221100 0000 0100 00000 0
Q ss_pred --------ccccce-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH------Hhh---ccc------------
Q 013332 215 --------TLAAGG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ------HLV---SRE------------ 260 (445)
Q Consensus 215 --------~~~G~~-----~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~------~~~---~~~------------ 260 (445)
+++|.. +++|+++|+++|++.|+.|.||+..+++++..|+ .+. .+.
T Consensus 239 ~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 318 (470)
T 1lfw_A 239 YESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGI 318 (470)
T ss_dssp HHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTTC
T ss_pred HHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccCC
Confidence 124554 8999999999999999999999999999998875 221 110
Q ss_pred --CC-CCCCeeEEEEEEEcCCccccccCc-EEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCC
Q 013332 261 --AD-PLDSQVLTVAKFEGGGAFNIIPDS-VTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYP 336 (445)
Q Consensus 261 --~~-~~~~~t~~i~~i~gG~~~NviP~~-a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 336 (445)
.+ ..+..++|++.|++ +|++ |++++|+|+++.++.+.+.++|++ +++. + +++++ ...+|
T Consensus 319 ~~~~~~~~~~t~~~g~i~~------~p~~~a~~~~diR~~~~~~~~~i~~~i~~--~~~~-----g--~~v~~--~~~~~ 381 (470)
T 1lfw_A 319 FHHDDLMGDLASSPSMFDY------EHAGKASLLNNVRYPQGTDPDTMIKQVLD--KFSG-----I--LDVTY--NGFEE 381 (470)
T ss_dssp CCEETTTEECEEEEEEEEE------ETTSCEEEEEEEEECTTCCHHHHHHHHHH--HHTT-----T--EEEEC--SCCBC
T ss_pred cccccccccceEEEEEEEE------cCCceEEEEEEEecCCCCCHHHHHHHHHH--HhcC-----C--eEEEE--EeCCC
Confidence 00 12346888888764 6999 999999999999999999999999 7753 4 44555 45666
Q ss_pred ccc--CCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 337 VTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 337 ~~~--~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
++. .|+++++.+.+++++.+|.++. ....+|++|++++. |++. ||+.. ||+...+|+|||+++++++.+
T Consensus 382 ~~~~~~d~~l~~~~~~a~~~~~g~~~~--~~~~~g~~d~~~~~---~~v~--~G~~~--pg~~~~~H~~~E~i~~~~l~~ 452 (470)
T 1lfw_A 382 PHYVPGSDPMVQTLLKVYEKQTGKPGH--EVVIGGGTYGRLFE---RGVA--FGAQP--ENGPMVMHAANEFMMLDDLIL 452 (470)
T ss_dssp CEECCTTCHHHHHHHHHHHHHHCCCCC--EEEESSCCGGGGST---TCEE--CCEEC--TTCCCCTTSTTCEEEHHHHHH
T ss_pred ceeeCCCCHHHHHHHHHHHHHcCCCCc--eeeecCHhHHHhCC---CeEE--ECCCC--CCCCCCCCCCCcceEHHHHHH
Confidence 654 5788999999999998788653 24577899999885 6543 56544 565678999999999999999
Q ss_pred HHHHHHHHHHHHHhhc
Q 013332 415 GAALHASLATRYLLEN 430 (445)
Q Consensus 415 ~~~~~~~~i~~l~~~~ 430 (445)
++++|+.++.+++.++
T Consensus 453 ~~~~~~~~~~~l~~~~ 468 (470)
T 1lfw_A 453 SIAIYAEAIYELTKDE 468 (470)
T ss_dssp HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 9999999999998654
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=100.00 E-value=1.2e-33 Score=268.07 Aligned_cols=248 Identities=16% Similarity=0.153 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec--cCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCc-
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE- 126 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~- 126 (445)
+++++++++|++|||+|++|.++++||+++|+++|++++.. .+++|++++++. ++|+|+|+|||||||+++...|.
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~vp~~~~~~w~~ 84 (268)
T 3t68_A 6 SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGT-QSPLFVFAGHTDVVPAGPLSQWHT 84 (268)
T ss_dssp CHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEECS-SSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeCC-CCCeEEEEccccccCCCCcccCCC
Confidence 67899999999999999999999999999999999998763 346899999943 36899999999999998877894
Q ss_pred --cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC-ccHHHHHHcc--CCCCcceeEE
Q 013332 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAG--ALENVEAIFG 196 (445)
Q Consensus 127 --~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-~G~~~l~~~~--~~~~~d~~i~ 196 (445)
|. .++||++||||+ |++++++|.|++.|++.+..++++|.|+|+++|| ++ .|++.+++.. ...++|++|+
T Consensus 85 ~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (268)
T 3t68_A 85 PPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIV 164 (268)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 54 577999999998 7999999999999998777788999999999999 44 4999988742 1235788887
Q ss_pred ecccCCCCCC-ceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEE
Q 013332 197 LHVSSLFPVG-TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE 275 (445)
Q Consensus 197 ~~~~~~~p~g-~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~ 275 (445)
.++......+ .+. .+.+|.
T Consensus 165 ~ept~~~~~~~~i~----~g~~G~-------------------------------------------------------- 184 (268)
T 3t68_A 165 GEPSSTLAVGDVVK----NGRRGG-------------------------------------------------------- 184 (268)
T ss_dssp CSCCBSSSTTSEEE----ECCGGG--------------------------------------------------------
T ss_pred eCCCCCccCCceeE----EecCCC--------------------------------------------------------
Confidence 5542211111 110 011222
Q ss_pred cCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHh
Q 013332 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADM 355 (445)
Q Consensus 276 gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~ 355 (445)
. . ..+++++++.+.+++++.
T Consensus 185 ----------------------------------p--~------------------------~~~~~~l~~~l~~a~~~~ 204 (268)
T 3t68_A 185 ----------------------------------G--F------------------------LTDTGELLAAVVAAVEEV 204 (268)
T ss_dssp ----------------------------------G--T------------------------SCCCCHHHHHHHHHHHHH
T ss_pred ----------------------------------c--c------------------------cCCchHHHHHHHHHHHHH
Confidence 2 1 011345889999998885
Q ss_pred cCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 356 LGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 356 ~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
.|.++.. ...+|++|++++++. +|++. +|+.. ...|+++|+++++++..+++++.+++.++++
T Consensus 205 ~gi~~~~--~~sgggtD~~~~~~~g~p~~~--~~~~~------~~~Hs~~E~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 205 NHQAPAL--LTTGGTSDGRFIAQMGAQVVE--LGPVN------ATIHKVNECVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp HSSCCEE--ESSCCCHHHHHHHHHTCEEEE--CCSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCcEE--ecCccccHHHHHHhcCCCEEE--EeeCC------CCCCCccccccHHHHHHHHHHHHHHHHHHhC
Confidence 5877642 356789999999987 55544 56432 3469999999999999999999999999874
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=100.00 E-value=4.7e-32 Score=257.09 Aligned_cols=249 Identities=18% Similarity=0.218 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeec--cCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCc-
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE- 126 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~- 126 (445)
+++++++++|++|||+|++|.++++||+++|+++||+++.. .+++|++++++. ++|+|+|+|||||||+++...|.
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~vp~~~~~~w~~ 84 (269)
T 4h2k_A 6 EKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGT-SEPVIAFAGHTDVVPTGDENQWSS 84 (269)
T ss_dssp HHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEeCC-CCCEEEEEeeecccCCCCcccccC
Confidence 78999999999999999999999999999999999998763 357899999943 46899999999999998877885
Q ss_pred --cc-cCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCCC-C-ccHHHHHHcc--CCCCcceeEE
Q 013332 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAG--ALENVEAIFG 196 (445)
Q Consensus 127 --~~-~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEEg-~-~G~~~l~~~~--~~~~~d~~i~ 196 (445)
|. .++||++||||+ |++++++|.+++.|++.+..++++|.|+|+++||+ + .|++.+++.. ...++|++++
T Consensus 85 ~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (269)
T 4h2k_A 85 PPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMV 164 (269)
T ss_dssp CTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 44 567999999998 79999999999999987767889999999999994 4 3999988642 1235788887
Q ss_pred ecccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEc
Q 013332 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEG 276 (445)
Q Consensus 197 ~~~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~g 276 (445)
.++......+.. +. .+.+|.
T Consensus 165 ~Ept~~~~~~~~-i~--~g~~G~--------------------------------------------------------- 184 (269)
T 4h2k_A 165 GEPSSAKNLGDV-VK--NGRRGG--------------------------------------------------------- 184 (269)
T ss_dssp CCCCBSSSTTSE-EE--CSCTTC---------------------------------------------------------
T ss_pred ECCCCCCcCCce-eE--Eecccc---------------------------------------------------------
Confidence 543211111100 00 011221
Q ss_pred CCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhc
Q 013332 277 GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADML 356 (445)
Q Consensus 277 G~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~ 356 (445)
| - + ..++++++.+.+++++..
T Consensus 185 G--------------------------------~--~-------------------------~~~~~l~~~l~~aa~~~~ 205 (269)
T 4h2k_A 185 G--------------------------------F--L-------------------------TKPGKLLDSITSAIEETI 205 (269)
T ss_dssp C-----------------------------------------------------------------HHHHHHHHHHHHHH
T ss_pred c--------------------------------c--c-------------------------CCCcHHHHHHHHHHHHHh
Confidence 0 1 0 012457888888888744
Q ss_pred CCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 357 GVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 357 g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
|.++.. ...+|+||+.+++.. +|++. ||+.. ..+|+++|+++++++.+++++|.+++.+++.
T Consensus 206 gi~~~~--~~~gggtDa~~~~~~g~p~~~--~~~~~------~~~Hs~~E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 206 GITPKA--ETGGGTSDGRFIALMGAEVVE--FGPLN------STIHKVNECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp SCCCEE--ECC--CHHHHHHHTTTCEEEE--CCSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCEE--ecCCCCchHHHHHhhCCCEEE--EEeCC------CCCcCCcccccHHHHHHHHHHHHHHHHHHhh
Confidence 877643 356789999999977 66655 45432 4479999999999999999999999998864
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.94 E-value=1.3e-26 Score=209.49 Aligned_cols=170 Identities=15% Similarity=0.112 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCCeeecc---CCceEEEEEcCC-C-CcEEEEEEecccccCCCC
Q 013332 50 YWMVNIRRKIHENPELGF--QEFETSKLIRAELDQMGIPYKFPV---AVTGVVGYIGTG-Q-PPFVALRADMDALAMEES 122 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~--~E~~~a~~l~~~l~~~G~~~~~~~---~~~nvia~~~~~-~-~p~i~l~~H~DtVp~~~~ 122 (445)
+++++++++|++|||+|+ +|.++++||+++|+++|++++... +++|+++++++. + +|+|+|+|||||||.++
T Consensus 10 ~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~- 88 (198)
T 1q7l_A 10 HPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFK- 88 (198)
T ss_dssp CHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCG-
T ss_pred HHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCc-
Confidence 568999999999999998 789999999999999999987642 567999999653 2 48999999999999875
Q ss_pred CCCc---ccc-C-CCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-C-CccHHHHHHccCC--CC
Q 013332 123 VEWE---HKS-K-VPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGAL--EN 190 (445)
Q Consensus 123 ~~w~---~~~-~-~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g-~~G~~~l~~~~~~--~~ 190 (445)
..|. |.. + +||++||||+ |++++++|.|++.|++.+..++++|.|+|+++|| + ..|++++++++.+ .+
T Consensus 89 ~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~ 168 (198)
T 1q7l_A 89 EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALR 168 (198)
T ss_dssp GGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTC
T ss_pred ccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccCC
Confidence 3674 442 2 5899999996 7999999999999999887889999999999999 5 3899999876432 23
Q ss_pred cceeEEecccCCCCCCceeeccCcccccceEEEE
Q 013332 191 VEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEA 224 (445)
Q Consensus 191 ~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~~i 224 (445)
+|+++ +.+.++|++...+ ..++||..|++|
T Consensus 169 ~~~~i--d~g~~ept~~~~v--~~~~kG~~~~~v 198 (198)
T 1q7l_A 169 AGFAL--DEGIANPTDAFTV--FYSERSPWWVRV 198 (198)
T ss_dssp EEEEE--ECCCCCSSSSEEE--EECCSSCGGGCC
T ss_pred cCEEE--ecCccCCCCCceE--EEEccEEEEEEC
Confidence 45555 2234678774322 246789888764
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.93 E-value=1.7e-25 Score=219.11 Aligned_cols=248 Identities=12% Similarity=0.071 Sum_probs=163.6
Q ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC-CCcEEEEEEecccccCC-------------
Q 013332 55 IRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAME------------- 120 (445)
Q Consensus 55 ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~p~i~l~~H~DtVp~~------------- 120 (445)
++++|+++||+|++|.++++||+++|+++|++++.+ ..+|+++++.+. .+|+|+|.||||+||.-
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTD-VLGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-CCCcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 588999999999999999999999999999998865 357999998654 34899999999999820
Q ss_pred CCCCCccc---c------------------------------------------------CC-C-------------Ccc
Q 013332 121 ESVEWEHK---S------------------------------------------------KV-P-------------GKM 135 (445)
Q Consensus 121 ~~~~w~~~---~------------------------------------------------~~-~-------------g~l 135 (445)
...+|..+ . ++ + |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 01135321 1 22 4 899
Q ss_pred ccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCceeecc
Q 013332 136 HACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRP 212 (445)
Q Consensus 136 ~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~ 212 (445)
|||.. |++++++|.+++.|+ +++++|.|+|+++|| |+.|++++++. ...|++|+.++ +..
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~---~~~~~~i~~d~-----~~~----- 224 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ---LKPTCAIVVET-----TTA----- 224 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH---HCCSEEEEEEE-----EEE-----
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc---cCCCEEEEEec-----ccC-----
Confidence 99944 799999999998876 477899999999999 77899988763 23577776432 110
Q ss_pred CcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEE
Q 013332 213 GPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGT 292 (445)
Q Consensus 213 g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~d 292 (445)
+ ++.|+++|++.|+.|.|++..+ .+ .+...|
T Consensus 225 -----~------~~~G~~~h~~~~~~G~g~~i~~--------------~~-------------~~~~~~----------- 255 (340)
T 2fvg_A 225 -----G------DNPELEERKWATHLGDGPAITF--------------YH-------------RGYVIP----------- 255 (340)
T ss_dssp -----C------SCSTTCCSSSSCCTTSCCEECS--------------CC-------------SSSCCC-----------
T ss_pred -----C------CCCCCccccCCcccCCCcEEEE--------------eC-------------CCCCCC-----------
Confidence 1 4578888998999998864110 00 000000
Q ss_pred EecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccch
Q 013332 293 FRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTED 372 (445)
Q Consensus 293 iR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD 372 (445)
..+.+.+++ ++ ++. |.+... ....+++||
T Consensus 256 ---------~~l~~~l~~--~a--------------------------------------~~~-gi~~~~-~~~~~ggtD 284 (340)
T 2fvg_A 256 ---------KEIFQTIVD--TA--------------------------------------KNN-DIPFQM-KRRTAGGTD 284 (340)
T ss_dssp ---------HHHHHHHHH--HH--------------------------------------HHT-TCCCEE-CCCC-----
T ss_pred ---------HHHHHHHHH--HH--------------------------------------HHc-CCCeEE-EecCCCCcc
Confidence 113333333 22 222 333221 124678899
Q ss_pred HHHHHh--h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 373 FSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 373 ~~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
++++.. . +|++.++.|. ..+|+++|+++++++..++++|..++.+++.
T Consensus 285 a~~~~~~~~GiP~v~~g~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 285 AGRYARTAYGVPAGVISTPA--------RYIHSPNSIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp --------CCSCEEEEEEEE--------EESSTTCEEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHhhCCCCcEEEecccc--------cccCChhhcccHHHHHHHHHHHHHHHHhccc
Confidence 999885 3 9998766442 2399999999999999999999999998764
No 32
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.91 E-value=7e-28 Score=234.61 Aligned_cols=323 Identities=12% Similarity=0.001 Sum_probs=181.6
Q ss_pred HHHHHHHHhCCCCCcchH-HHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccCCCCCCCccccCC
Q 013332 53 VNIRRKIHENPELGFQEF-ETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKV 131 (445)
Q Consensus 53 ~~ll~~l~~ips~s~~E~-~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~~~~~~w~~~~~~ 131 (445)
+++|++|++|||+|++|. ++++||+++|+++|++++++ ..+||+|+++++ +|+|+|.|||||||..... ..+
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D-~~GNlia~~~g~-~p~lll~~H~Dtvp~~v~~-----~~~ 84 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGS-SPRIMVAAHMDKIGVMVNH-----IDK 84 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEEC-TTCCEEEEECCS-SSEEEEEEECCBCEEEEEE-----ECT
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEe-CCCeEEEEECCC-CceEEEEeccccCCCcCCe-----eec
Confidence 479999999999999885 68999999999999999865 468999999875 5999999999999864321 234
Q ss_pred CCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCce
Q 013332 132 PGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTV 208 (445)
Q Consensus 132 ~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~ 208 (445)
+|.++++|. +.+.++...++..+...+ .+...+.++++.+|| +..|.+.+..........+...... ...+.
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~- 159 (354)
T 2wzn_A 85 DGYLHIVPIGGVLPETLVAQRIRFFTEKG-ERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEA---EEMGF- 159 (354)
T ss_dssp TSCEEEEEESSCCGGGGTTCEEEEEETTE-EEEEEECCCCGGGC---------CCGGGCCEECSCSSHHHH---HHTTC-
T ss_pred CCceeeccCCCccHHHHHHHHHHHhhccC-CccceEEEeeeeeEecccccccchhhhhhhhhhcccchhhh---hcccc-
Confidence 677777665 222222222222233332 455678888999999 5566665543322111111111000 00011
Q ss_pred eeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEE------EEEcCCcccc
Q 013332 209 ASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVA------KFEGGGAFNI 282 (445)
Q Consensus 209 ~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~------~i~gG~~~Nv 282 (445)
.....+.....+.+.+...|++.+..+.|++..+..++.+|.... ........ ...++...|.
T Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~ 228 (354)
T 2wzn_A 160 ----RVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGDHE-------ADIYIVGSVQEEVGLRGARVASYA 228 (354)
T ss_dssp ----CTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCCCS-------SEEEEEEESCGGGTSHHHHHHHHH
T ss_pred ----ccceeeeeeeeeEeecccccccccccccchhhhHHHHHHHHHhcc-------ccccccccceeeeeeecccccccc
Confidence 112234555666777888888776554455444444444432211 00111111 1112235667
Q ss_pred ccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHH-HHhcCCccc
Q 013332 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVA-ADMLGVQNI 361 (445)
Q Consensus 283 iP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~-~~~~g~~~~ 361 (445)
++..+....+.+........ .. .. ...+....... . ...++.......... ....+..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~------~~--~~----~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~- 288 (354)
T 2wzn_A 229 INPEVGIAMDVTFAKQPHDK------GK--IV----PELGKGPVMDV--G-----PNINPKLRAFADEVAKKYEIPLQV- 288 (354)
T ss_dssp HCCSEEEEEEEEECCCTTST------TC--CC----CCTTSCCEEEE--S-----TTSCHHHHHHHHHHHHHTTCCCEE-
T ss_pred cccccceeeeeeeccccchh------hh--hh----eeecccccccc--c-----cccCcchhhhhHHHHHHhcCCCce-
Confidence 77777777777765433210 11 00 00111111111 1 112222222222222 22223333
Q ss_pred ccCCCCCccchHHHHHh--h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 362 KENRPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 362 ~~~~~~~g~tD~~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
.....+|+||++++.. . +|++.+|.|. ..+|++||+++++++.+++++|.+++.+|-
T Consensus 289 -~~~~~~ggTDa~~~~~~~~Giptv~~G~g~--------~~~Ht~~E~v~i~dl~~~~~ll~~~i~~L~ 348 (354)
T 2wzn_A 289 -EPSPRPTGTDANVMQINKEGVATAVLSIPI--------RYMHSQVELADARDVDNTIKLAKALLEELK 348 (354)
T ss_dssp -EECCSCCSSHHHHHHTSTTCCEEEEEEEEE--------BSTTSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred -EEEecccccHHHHHHHhcCCCCEEEECccc--------CCCCcccEEEEHHHHHHHHHHHHHHHHhCc
Confidence 3456789999998753 3 8998876552 348999999999999999999999998873
No 33
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.91 E-value=1.9e-23 Score=207.09 Aligned_cols=256 Identities=13% Similarity=0.143 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC-CCcEEEEEEecccccC---------
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAM--------- 119 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~p~i~l~~H~DtVp~--------- 119 (445)
+++++++++|+++||+|++|.+++++|+++|+++|++++.+ ..+|+++++.+. .+|+|+|.|||||||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTD-RLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEEC-TTCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEc-CCCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 46899999999999999999999999999999999998865 468999988554 4589999999999982
Q ss_pred -------CC---------------CC-------CCc--c--cc----------------------------C--------
Q 013332 120 -------EE---------------SV-------EWE--H--KS----------------------------K-------- 130 (445)
Q Consensus 120 -------~~---------------~~-------~w~--~--~~----------------------------~-------- 130 (445)
|. .+ .|. + .. +
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 10 00 021 1 00 1
Q ss_pred --------CCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecc
Q 013332 131 --------VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHV 199 (445)
Q Consensus 131 --------~~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~ 199 (445)
++|++|||+. |++++++|.+++.|++.+ ++++|.|+|+++|| |+.|++.+... + .+|++|+.++
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~--~-~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT--I-QPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc--c-CCCEEEEEec
Confidence 2689999976 799999999999998763 67999999999999 67899988542 2 3577776543
Q ss_pred cCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCc
Q 013332 200 SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGA 279 (445)
Q Consensus 200 ~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~ 279 (445)
.. .+. .+|. .|+.+. ..++. |
T Consensus 241 ~~---~~~--------~~g~---------------~~~~~~---------------------~~lg~----------G-- 261 (373)
T 1vhe_A 241 GI---AGD--------TPGI---------------SEKEAQ---------------------SKMGK----------G-- 261 (373)
T ss_dssp EE---CCC--------STTC---------------CTTTCC---------------------CCTTS----------C--
T ss_pred cc---cCC--------CCCC---------------cccccc---------------------cccCC----------C--
Confidence 21 010 0121 111110 00010 1
Q ss_pred cccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCc
Q 013332 280 FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQ 359 (445)
Q Consensus 280 ~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~ 359 (445)
| . +.+. . ++...++++++.+++++++. |.+
T Consensus 262 ----~-------------------------~--------------i~~~---~---~~~~~~~~l~~~l~~~a~~~-gi~ 291 (373)
T 1vhe_A 262 ----P-------------------------Q--------------IIVY---D---ASMVSHKGLRDAVVATAEEA-GIP 291 (373)
T ss_dssp ----C-------------------------E--------------EEEE---E---TTEECCHHHHHHHHHHHHHH-TCC
T ss_pred ----c-------------------------e--------------EEEe---C---CCCCCCHHHHHHHHHHHHHc-CCC
Confidence 0 0 0110 0 12356788999999999887 876
Q ss_pred ccccCCCCCccchHHHH--Hhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 360 NIKENRPLMGTEDFSFF--AEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 360 ~~~~~~~~~g~tD~~~~--~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
+... ...+++||++++ ... +|++.++.|. ..+|+++|+++++++..+++++..++.+++..
T Consensus 292 ~~~~-~~~~ggtDa~~~~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~~ 355 (373)
T 1vhe_A 292 YQFD-AIAGGGTDSGAIHLTANGVPALSITIAT--------RYIHTHAAMLHRDDYENAVKLITEVIKKLDRK 355 (373)
T ss_dssp CEEE-EETTCCCTHHHHTTSTTCCCEEEEEEEE--------BSTTSSCEEEEHHHHHHHHHHHHHHHHHCCHH
T ss_pred eEEe-cCCCCCccHHHHHHhCCCCcEEEEcccc--------ccCCChhheecHHHHHHHHHHHHHHHHHhcHH
Confidence 5321 346788999999 454 9998866542 34899999999999999999999999987654
No 34
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.90 E-value=3.3e-23 Score=202.30 Aligned_cols=239 Identities=19% Similarity=0.196 Sum_probs=175.8
Q ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEeccccc-------------
Q 013332 52 MVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA------------- 118 (445)
Q Consensus 52 ~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp------------- 118 (445)
+++++++|+++||+|++|.++++||+++|+++|+ ++. +..+|++++++++ +|+|+|.||+|||+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-DAIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-CTTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-cCCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 6789999999999999999999999999999999 765 4578999998663 58999999999994
Q ss_pred ---CCCCCCCc---------------------------------------------------------------------
Q 013332 119 ---MEESVEWE--------------------------------------------------------------------- 126 (445)
Q Consensus 119 ---~~~~~~w~--------------------------------------------------------------------- 126 (445)
.|. |.
T Consensus 81 ~~~~Gg---~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~ 157 (332)
T 2wyr_A 81 FRKVGG---IDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKK 157 (332)
T ss_dssp EEEESC---CCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECC
T ss_pred EEecCC---cChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEcc
Confidence 443 21
Q ss_pred -cccCCCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCC
Q 013332 127 -HKSKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSL 202 (445)
Q Consensus 127 -~~~~~~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~ 202 (445)
|....+|++|||.. |++++++|.+++.|++.+ ++++|.|+|+++|| |+.|++++.+. ..+|++++.++..
T Consensus 158 ~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~---~~~~~~i~~d~~~- 231 (332)
T 2wyr_A 158 HFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH---YYPQYAFAIDSFA- 231 (332)
T ss_dssp CCEEETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT---CCCSEEEEECCEE-
T ss_pred ccEEecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc---cCCCEEEEEeccc-
Confidence 11125789999944 799999999999998764 67999999999999 77899988642 2467777654311
Q ss_pred CCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCcccc
Q 013332 203 FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNI 282 (445)
Q Consensus 203 ~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~Nv 282 (445)
... ++| | .+. ++. |..
T Consensus 232 -~~~---------~p~---------~------~~~--------------------------lg~----------G~~--- 247 (332)
T 2wyr_A 232 -CCS---------PLT---------G------DVK--------------------------LGK----------GPV--- 247 (332)
T ss_dssp -CCS---------GGG---------T------TCC--------------------------TTS----------CCE---
T ss_pred -ccC---------CCC---------C------cee--------------------------eCC----------CCE---
Confidence 000 111 0 000 010 100
Q ss_pred ccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccc
Q 013332 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIK 362 (445)
Q Consensus 283 iP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~ 362 (445)
+ . +. .. ....++++++.+++++++. |.++..
T Consensus 248 ----------i----------------~----------------~~---d~---~~~~~~~l~~~l~~~~~~~-gi~~~~ 278 (332)
T 2wyr_A 248 ----------I----------------R----------------AV---DN---SAIYSRDLARKVWSIAEKN-GIEIQI 278 (332)
T ss_dssp ----------E----------------E----------------EE---CS---SCBCCHHHHHHHHHHHHHT-TCCCEE
T ss_pred ----------E----------------E----------------Ec---CC---CCCCCHHHHHHHHHHHHHc-CCCeEE
Confidence 0 1 00 00 2345788999999999887 876532
Q ss_pred cCCCCCccchHHHHHhhcCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013332 363 ENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATR 425 (445)
Q Consensus 363 ~~~~~~g~tD~~~~~~~ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~ 425 (445)
...+++||++++...+|++.++.|. ..+|+++|+++++++..+++++..++.+
T Consensus 279 --~~~~ggtDa~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 279 --GVTGGGTDASAFQDRSKTLALSVPI--------KYLHSEVETLHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp --EECSSCCGGGGGTTTSEEEEEECEE--------BSCSSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred --ecCCCCchHHHHHcCCCEEEEcCCc--------CCCCChhhcccHHHHHHHHHHHHHHHHh
Confidence 3456899999988778988765431 3499999999999999999999998865
No 35
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.88 E-value=8.5e-22 Score=193.86 Aligned_cols=247 Identities=17% Similarity=0.146 Sum_probs=175.7
Q ss_pred HHHHHHHHHhCCCCCcch-HHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEeccccc------------
Q 013332 52 MVNIRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA------------ 118 (445)
Q Consensus 52 ~~~ll~~l~~ips~s~~E-~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp------------ 118 (445)
+++++++|+++||+|++| .+++++|+++|+++|++++.+ ..+|+++.++++ +|+|+|.||+|||+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVD-KLGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEEC-TTCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEc-CCCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 578999999999999999 999999999999999998864 468999998655 58999999999995
Q ss_pred ----CCCCCCCccc------------------------------------------------------------------
Q 013332 119 ----MEESVEWEHK------------------------------------------------------------------ 128 (445)
Q Consensus 119 ----~~~~~~w~~~------------------------------------------------------------------ 128 (445)
.|. |...
T Consensus 86 ~~~~~Gg---~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v 162 (353)
T 1y0y_A 86 RVAPIGG---VDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVI 162 (353)
T ss_dssp EEEEESS---CCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEE
T ss_pred EEEEeCC---cchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEE
Confidence 332 1100
Q ss_pred -------cCCCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEec
Q 013332 129 -------SKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (445)
Q Consensus 129 -------~~~~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~ 198 (445)
...++++|||.. |++++++|.+++.|++ ++++|.|+|+++|| |+.|++.+... ..+|++++.+
T Consensus 163 ~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~---~~~~~~i~~d 235 (353)
T 1y0y_A 163 TWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG---IEPDYGFAID 235 (353)
T ss_dssp EECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH---HCCSEEEEEE
T ss_pred EeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc---cCCCEEEEEe
Confidence 001467888854 7999999999998865 67899999999999 67899988642 1357777654
Q ss_pred ccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCC
Q 013332 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGG 278 (445)
Q Consensus 199 ~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~ 278 (445)
+... .+ .+ +.. .+.+ ...++ +|.
T Consensus 236 ~~~~--~~----~p-----~~~---------------~~~g---------------------~~~lg----------~G~ 258 (353)
T 1y0y_A 236 VTIA--AD----IP-----GTP---------------EHKQ---------------------VTHLG----------KGT 258 (353)
T ss_dssp EEEC--CC----ST-----TCC---------------GGGC---------------------CCCTT----------SCE
T ss_pred cccc--cC----CC-----CCc---------------cccC---------------------ccccC----------CCc
Confidence 3210 00 01 100 0000 00000 120
Q ss_pred ccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCC
Q 013332 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGV 358 (445)
Q Consensus 279 ~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~ 358 (445)
. + + +.- . ....++++++.+++++++. |.
T Consensus 259 ~-------------i----------------~----------------~~d--~----~~~~~~~l~~~l~~~a~~~-gi 286 (353)
T 1y0y_A 259 A-------------I----------------K----------------IMD--R----SVICHPTIVRWLEELAKKH-EI 286 (353)
T ss_dssp E-------------E----------------E----------------EEE--T----TEECCHHHHHHHHHHHHHT-TC
T ss_pred E-------------E----------------E----------------EeC--C----CCCCCHHHHHHHHHHHHHc-CC
Confidence 0 0 1 000 0 2345788999999999887 87
Q ss_pred cccccCCCCCccchHHHH--Hhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 013332 359 QNIKENRPLMGTEDFSFF--AEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 428 (445)
Q Consensus 359 ~~~~~~~~~~g~tD~~~~--~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~ 428 (445)
+.... ...+++||++++ +.. +|++.++.|. ..+|+++|+++++++..++++|..++.++..
T Consensus 287 ~~~~~-~~~~ggsDa~~~~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 287 PYQLE-ILLGGGTDAGAIHLTKAGVPTGALSVPA--------RYIHSNTEVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp CEEEE-ECSSCCCTHHHHTTSTTCCCEEEEEEEE--------BSCSSSCEEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEEe-ecCCCCchHHHHHHhCCCCcEEEEcccc--------cccCCHHHhcCHHHHHHHHHHHHHHHHhhhh
Confidence 65321 346789999999 554 9998866542 3499999999999999999999999988753
No 36
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.87 E-value=1.5e-21 Score=191.79 Aligned_cols=140 Identities=16% Similarity=0.154 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC-CCcEEEEEEecccc-----------
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDAL----------- 117 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~p~i~l~~H~DtV----------- 117 (445)
+++++++++|++|||+|++|.++++||.++|+++|++++++ ..+|+++++++. .+|+|+|.||+|||
T Consensus 6 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~G 84 (349)
T 2gre_A 6 KETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN-NKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPDG 84 (349)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC-SSSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe-cCCcEEEEecCCCCCceEEEEecccccceeEEEECCCC
Confidence 67999999999999999999999999999999999998865 467999999654 34899999999999
Q ss_pred -----cCCCCCCCccc----------------------------------------------------------------
Q 013332 118 -----AMEESVEWEHK---------------------------------------------------------------- 128 (445)
Q Consensus 118 -----p~~~~~~w~~~---------------------------------------------------------------- 128 (445)
|.|. |..+
T Consensus 85 ~l~~~~~Gg---~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~ 161 (349)
T 2gre_A 85 RLSLSMIGG---FRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIE 161 (349)
T ss_dssp CEEEEEESS---CCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCC
T ss_pred eEEEEecCC---CccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCC
Confidence 4432 3210
Q ss_pred ------------cCCCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcce
Q 013332 129 ------------SKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEA 193 (445)
Q Consensus 129 ------------~~~~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~ 193 (445)
...+|++|||+. |++++++|.+++.|++.+..++++|.|+|+++|| |+.|++.+ ...+|+
T Consensus 162 ~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~-----~~~~~~ 236 (349)
T 2gre_A 162 VGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI-----PEETVE 236 (349)
T ss_dssp TTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC-----CTTEEE
T ss_pred CCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc-----ccCCCE
Confidence 013578999976 7999999999999998776788999999999999 66888765 124567
Q ss_pred eEEec
Q 013332 194 IFGLH 198 (445)
Q Consensus 194 ~i~~~ 198 (445)
++..+
T Consensus 237 ~i~~D 241 (349)
T 2gre_A 237 YLAVD 241 (349)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 77653
No 37
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.87 E-value=1.7e-21 Score=191.22 Aligned_cols=243 Identities=17% Similarity=0.141 Sum_probs=167.3
Q ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEeccccc------------
Q 013332 51 WMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA------------ 118 (445)
Q Consensus 51 ~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp------------ 118 (445)
++++++++|+++||+|++|.++++||+++|+++|++++++ ..+|+++.+.+.+.|.|+|.||+|||+
T Consensus 6 ~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l~ 84 (346)
T 1vho_A 6 ETGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTT-RHGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFAR 84 (346)
T ss_dssp CHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEEC-TTSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEEE
T ss_pred HHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEe-cCCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeEE
Confidence 4789999999999999999999999999999999998864 468999998654348999999999994
Q ss_pred ---CCCCCCCcccc-----------------------------------------------------------------C
Q 013332 119 ---MEESVEWEHKS-----------------------------------------------------------------K 130 (445)
Q Consensus 119 ---~~~~~~w~~~~-----------------------------------------------------------------~ 130 (445)
.| .|.... .
T Consensus 85 ~~~~G---g~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~ 161 (346)
T 1vho_A 85 LEPVG---GVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFE 161 (346)
T ss_dssp EEEC-----------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEE
T ss_pred EEEeC---CccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhh
Confidence 32 232110 0
Q ss_pred CCCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCc
Q 013332 131 VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGT 207 (445)
Q Consensus 131 ~~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~ 207 (445)
.+|+++||+. |.++++++.+++.+++.+ +++++.++|+++|| |..|++.... .+ ..|+++..+..
T Consensus 162 ~g~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~--~i-~~~~~i~~D~~------- 229 (346)
T 1vho_A 162 TNGKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAY--EI-NPDAAIVMDVT------- 229 (346)
T ss_dssp ETTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTC--CC-CCSEEEEEEEE-------
T ss_pred hcCeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhc--cc-CCCEEEEeecc-------
Confidence 1256888877 689999999999987653 66899999999999 5577775421 11 23444433210
Q ss_pred eeeccCcccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCc
Q 013332 208 VASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDS 286 (445)
Q Consensus 208 ~~~~~g~~~~G~~~~~i~~~G~~~Has-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~ 286 (445)
|++ .|. .+ .
T Consensus 230 ------------------------~~~~~~~--~~--~------------------------------------------ 239 (346)
T 1vho_A 230 ------------------------FASEPPF--SD--H------------------------------------------ 239 (346)
T ss_dssp ------------------------CCCCTTS--CC--C------------------------------------------
T ss_pred ------------------------cccCCCC--Cc--c------------------------------------------
Confidence 111 010 00 0
Q ss_pred EEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCC
Q 013332 287 VTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRP 366 (445)
Q Consensus 287 a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~ 366 (445)
.. . ..+. .+++ +...++++++.+++++++. |.+... ..
T Consensus 240 ----------------------~~--~------~~g~--~i~~-------~~~~~~~l~~~~~~~a~~~-gi~~~~--~~ 277 (346)
T 1vho_A 240 ----------------------IE--L------GKGP--VIGL-------GPVVDRNLVQKIIEIAKKH-NVSLQE--EA 277 (346)
T ss_dssp ----------------------CC--T------TSCC--EEEC-------STTSCHHHHHHHHHHHHHT-TCCCEE--ES
T ss_pred ----------------------cc--c------CCCc--eEEe-------CCcCCHHHHHHHHHHHHHC-CCCEEE--Ee
Confidence 00 0 0011 1221 2356788999999999987 887643 23
Q ss_pred C-C-ccchHHHHHh--h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 013332 367 L-M-GTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 429 (445)
Q Consensus 367 ~-~-g~tD~~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~~~ 429 (445)
. + |+||++++.. . +|++++|+|. ..+|+++|+++++++..++++|..++.+++.+
T Consensus 278 ~~g~ggsDa~~~~~~~~gipt~~lg~~~--------~~~Hs~~E~~~~~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 278 VGGRSGTETDFVQLVRNGVRTSLISIPL--------KYMHTPVEMVDPRDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp SCCC----CTTHHHHHTTCEEEEEEEEC--------BSTTSTTEEECHHHHHHHHHHHHHHHHHCC--
T ss_pred CCCCCCchHHHHHHhCCCCcEEEEehhh--------cccccHHHhcCHHHHHHHHHHHHHHHHHhhhh
Confidence 3 4 8999999964 3 9998876553 23999999999999999999999999887654
No 38
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.85 E-value=3.6e-21 Score=186.61 Aligned_cols=238 Identities=13% Similarity=0.096 Sum_probs=165.5
Q ss_pred hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc------CCceEEEEEcCCCCcEEEEEEeccccc---
Q 013332 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYIGTGQPPFVALRADMDALA--- 118 (445)
Q Consensus 48 ~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~------~~~nvia~~~~~~~p~i~l~~H~DtVp--- 118 (445)
+.+++++++++|+++||+|++|.+++++|+++|+++|++++++. +.+|+++.+++ . |.|+|.||||||+
T Consensus 15 ~~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~~~v 92 (321)
T 3cpx_A 15 LYFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIGFTV 92 (321)
T ss_dssp GGCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCEEEE
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcCCeEe
Confidence 44678999999999999999999999999999999999876543 15799999865 4 7899999999993
Q ss_pred --------CCCCCCCc-----ccc-------------------------------------CCCCccccCcc--hHHHHH
Q 013332 119 --------MEESVEWE-----HKS-------------------------------------KVPGKMHACGH--DAHVAM 146 (445)
Q Consensus 119 --------~~~~~~w~-----~~~-------------------------------------~~~g~l~GrG~--kg~~aa 146 (445)
.|....|. ... ..+|+++||+. |+++++
T Consensus 93 ~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa 172 (321)
T 3cpx_A 93 SYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWT 172 (321)
T ss_dssp CSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHH
T ss_pred cccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHH
Confidence 33322221 000 01267888877 699999
Q ss_pred HHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHH---HccCCCCcceeEEecccCCCCCCceeeccCcccccceEE
Q 013332 147 LLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKML---DAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFF 222 (445)
Q Consensus 147 ~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~---~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~G~~~~ 222 (445)
++.+++.++ . +.++|+++|| |+.|++... .+.. +.|+++..++ +. .+.
T Consensus 173 ~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~~--~~~~~i~~D~-----~~----------~~~--- 224 (321)
T 3cpx_A 173 ALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYETF--HVKQSLICDI-----TW----------VTE--- 224 (321)
T ss_dssp HHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHHH--CCCEEEECCC-----EE----------CCS---
T ss_pred HHHHHHHhc-------C-cEEEEECCccCchhcchhhhhcccccc--CCCEEEEEeC-----cc----------ccC---
Confidence 998887653 2 9999999999 667887532 1211 3567776432 10 011
Q ss_pred EEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHH
Q 013332 223 EAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESII 302 (445)
Q Consensus 223 ~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~ 302 (445)
.. .++
T Consensus 225 --------------------------------~~------~~~------------------------------------- 229 (321)
T 3cpx_A 225 --------------------------------GV------EAG------------------------------------- 229 (321)
T ss_dssp --------------------------------SS------CTT-------------------------------------
T ss_pred --------------------------------Cc------ccC-------------------------------------
Confidence 00 000
Q ss_pred HHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHH--hh-
Q 013332 303 QLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFA--EA- 379 (445)
Q Consensus 303 ~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~--~~- 379 (445)
. |. .+.. .. . ...++++++.+++++++. |.+.... ...+|+||++.+. ..
T Consensus 230 -------~-----------G~--~i~~--~~-~--~~~~~~l~~~~~~~a~~~-gi~~q~~-~~~~GGsD~~~~~~s~~G 282 (321)
T 3cpx_A 230 -------K-----------GV--AISM--RD-R--MIPRKKYVNRIIELARQT-DIPFQLE-VEGAGASDGRELQLSPYP 282 (321)
T ss_dssp -------S-----------CE--EEEE--ES-S--SCCCHHHHHHHHHHHTTS-SCCEEEE-ECSSCCCHHHHHHHSSSC
T ss_pred -------C-----------Cc--EEEE--CC-C--CCCCHHHHHHHHHHHHHc-CCCEEEE-eCCCCCccHHHHHHhCCC
Confidence 0 11 1222 11 1 235778888888888887 8765421 2377899999984 44
Q ss_pred cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013332 380 IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATR 425 (445)
Q Consensus 380 ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~ 425 (445)
+|++.+|.|. ..+|+++|++.++++...++++..++.+
T Consensus 283 ipt~~lG~~~--------~~~Hs~~E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 283 WDWCFIGAPE--------KDAHTPNECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp CBCCBEECEE--------BSTTSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEchhh--------cccchhhhheeHHHHHHHHHHHHHHHHh
Confidence 8988554332 3499999999999999999999998865
No 39
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.84 E-value=1e-19 Score=178.72 Aligned_cols=249 Identities=14% Similarity=0.131 Sum_probs=172.1
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccC--------C-----
Q 013332 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM--------E----- 120 (445)
Q Consensus 54 ~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~--------~----- 120 (445)
+++++|+++||+|++|.++++||+++|+++|++++.+ ..+|+++++++.+.|+|+|.||+|||+. |
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d-~~gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEEC-TTCCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-cCCCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 7899999999999999999999999999999998864 4679999986544589999999999951 0
Q ss_pred CCCCCcc---------------------------------------------------------------ccCCCCcccc
Q 013332 121 ESVEWEH---------------------------------------------------------------KSKVPGKMHA 137 (445)
Q Consensus 121 ~~~~w~~---------------------------------------------------------------~~~~~g~l~G 137 (445)
....|.+ ....+|++||
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 0001210 0114678999
Q ss_pred Ccc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEecccCCCCCCceeeccCc
Q 013332 138 CGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGP 214 (445)
Q Consensus 138 rG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~ 214 (445)
|+. |+++++++.+++.+++.+ ++.++.++++++|| |+.|++..... . ..|+++..+... . +
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~-i--~~~~~i~~D~~~--~-~-------- 229 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA-V--SPDVAIVLDTAC--W-A-------- 229 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH-H--CCSEEEEECCCC--C-S--------
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc-c--CCCEEEEEeccc--c-C--------
Confidence 987 699999999999987643 67899999999999 66788765432 1 346666543211 0 0
Q ss_pred ccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCCccccccCcEEEEEEEe
Q 013332 215 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 294 (445)
Q Consensus 215 ~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~NviP~~a~~~~diR 294 (445)
..|. .+. .. . ..++ .
T Consensus 230 -------------------~~~~--~~~-----------~~---~--~~~~----------~------------------ 244 (348)
T 1ylo_A 230 -------------------KNFD--YGA-----------AN---H--RQIG----------N------------------ 244 (348)
T ss_dssp -------------------STTC--CST-----------TC---C--CCTT----------S------------------
T ss_pred -------------------CCCC--CCc-----------cc---c--ccCC----------C------------------
Confidence 0111 110 00 0 0000 0
Q ss_pred cCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCCcccccCCCCCccchHH
Q 013332 295 AFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS 374 (445)
Q Consensus 295 ~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~ 374 (445)
|+.+.+. .. ....++.+++.+++++++. |.+.... ...+|+||++
T Consensus 245 ---------------------------G~~i~~~---~~---~~~~~~~l~~~~~~~a~~~-gi~~~~~-~~~~ggsDa~ 289 (348)
T 1ylo_A 245 ---------------------------GPMLVLS---DK---SLIAPPKLTAWIETVAAEI-GVPLQAD-MFSNGGTDGG 289 (348)
T ss_dssp ---------------------------CCEEEEE---CS---SCBCCHHHHHHHHHHHHHH-TCCCEEE-ECSSCCCHHH
T ss_pred ---------------------------CcEEEEe---CC---CCCCCHHHHHHHHHHHHHc-CCCeEEe-ecCCCcchHH
Confidence 1111111 01 1235778888999988887 8765421 3467899999
Q ss_pred HHHh--h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 013332 375 FFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 427 (445)
Q Consensus 375 ~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l~ 427 (445)
++.. . +|++++|+|. ..+|+++|+++++++..++++|..++..+.
T Consensus 290 ~~~~~~~gipt~~lg~~~--------~~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 290 AVHLTGTGVPTLVMGPAT--------RHGHCAASIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp HHHTSTTCCCEEEEECCC--------BSCSSSCEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhcCCCCEEEECccc--------CcCCCcceEeeHHHHHHHHHHHHHHHHHhh
Confidence 9964 3 9998765442 349999999999999999999999988764
No 40
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.72 E-value=1.7e-17 Score=158.08 Aligned_cols=131 Identities=13% Similarity=0.086 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHhCCCCCc--------chHHHHHHHHHHHHhCCCCeeeccC------CceEEEEEcCC-CCcEEEEEEec
Q 013332 50 YWMVNIRRKIHENPELGF--------QEFETSKLIRAELDQMGIPYKFPVA------VTGVVGYIGTG-QPPFVALRADM 114 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~--------~E~~~a~~l~~~l~~~G~~~~~~~~------~~nvia~~~~~-~~p~i~l~~H~ 114 (445)
+++++++++|++|||+|+ +|.++++||+++|+++|++++.+.. ..||++++++. ++++|+|.+|+
T Consensus 7 ~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH~ 86 (284)
T 1tkj_A 7 ANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAHL 86 (284)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEeec
Confidence 779999999999999986 6889999999999999999876422 46999999664 34889999999
Q ss_pred ccccCCCCCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccC---
Q 013332 115 DALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA--- 187 (445)
Q Consensus 115 DtVp~~~~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~--- 187 (445)
|+||. |||+ |++++++|.+++.|++.+.+++++|+|+|+++|| |..|++.++++..
T Consensus 87 D~v~~-----------------g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~ 149 (284)
T 1tkj_A 87 DSVSS-----------------GAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPSAD 149 (284)
T ss_dssp CCCTT-----------------SCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHSCHHH
T ss_pred CCCCC-----------------CCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhhCccch
Confidence 99985 4565 6899999999999998877889999999999999 6689999987632
Q ss_pred CCCcceeEEe
Q 013332 188 LENVEAIFGL 197 (445)
Q Consensus 188 ~~~~d~~i~~ 197 (445)
..+++++|.+
T Consensus 150 ~~~~~~~i~~ 159 (284)
T 1tkj_A 150 RSKLAGYLNF 159 (284)
T ss_dssp HTTEEEEEEE
T ss_pred hhcEEEEEEe
Confidence 1234555544
No 41
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.70 E-value=4.9e-17 Score=156.05 Aligned_cols=136 Identities=15% Similarity=0.163 Sum_probs=110.5
Q ss_pred hHHHHhhcCchhHHHHHHHHHHHHhCCC---CCcchHHHHHHHHHHHHhCCC--C-eeecc------CCceEEEEEcCC-
Q 013332 37 VKFLDFAKKPEIFYWMVNIRRKIHENPE---LGFQEFETSKLIRAELDQMGI--P-YKFPV------AVTGVVGYIGTG- 103 (445)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~ll~~l~~ips---~s~~E~~~a~~l~~~l~~~G~--~-~~~~~------~~~nvia~~~~~- 103 (445)
+++.+.++. +++++++++|+++|+ .|..|.++++||.++|+++|+ + ++.+. ..+||++++++.
T Consensus 11 ~~~~~~~~~----~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~ 86 (299)
T 1rtq_A 11 TAWLPQVDA----SQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSE 86 (299)
T ss_dssp HHHGGGCCH----HHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSS
T ss_pred HHHHHhcCH----HHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCC
Confidence 445555543 779999999999995 467788999999999999874 3 33321 248999999654
Q ss_pred -CCcEEEEEEecccccCCCCCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCcc
Q 013332 104 -QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGG 178 (445)
Q Consensus 104 -~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G 178 (445)
+.++|+|.+|+||||. .|.. +++||||+ |++++++|.+++.|++.+.+++++|.|+++++|| |..|
T Consensus 87 ~~~~~v~l~aH~D~v~~----~~~~-----~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~G 157 (299)
T 1rtq_A 87 APDEWIVIGGHLDSTIG----SHTN-----EQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRG 157 (299)
T ss_dssp EEEEEEEEEEECCCCSS----TTCC-----TTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHH
T ss_pred CCCCEEEEEeccccCCC----cCcC-----CCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCchh
Confidence 2478999999999983 4643 67899998 6999999999999998877889999999999999 6789
Q ss_pred HHHHHHc
Q 013332 179 AKKMLDA 185 (445)
Q Consensus 179 ~~~l~~~ 185 (445)
+++++++
T Consensus 158 s~~~~~~ 164 (299)
T 1rtq_A 158 SQDLANQ 164 (299)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999875
No 42
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.70 E-value=1.5e-15 Score=148.26 Aligned_cols=246 Identities=14% Similarity=0.092 Sum_probs=169.4
Q ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCC--CCcEEEEEEecccccC-----CCC-
Q 013332 51 WMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDALAM-----EES- 122 (445)
Q Consensus 51 ~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~--~~p~i~l~~H~DtVp~-----~~~- 122 (445)
++++++++|+++||+|++|.++++|++++|+++|++++.+ ..+|+++++++. ++|+|+|.||||+|+. .+.
T Consensus 4 ~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~D-~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G 82 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTD-GLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDG 82 (355)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEEC-CCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCC
Confidence 5789999999999999999999999999999999988865 478999999654 3699999999999972 110
Q ss_pred -------CCCccc----------c------------------------------------------------C-------
Q 013332 123 -------VEWEHK----------S------------------------------------------------K------- 130 (445)
Q Consensus 123 -------~~w~~~----------~------------------------------------------------~------- 130 (445)
.+|... + +
T Consensus 83 ~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~ 162 (355)
T 3kl9_A 83 TFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIV 162 (355)
T ss_dssp CEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEE
T ss_pred EEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEE
Confidence 122100 0 0
Q ss_pred --------C-CCccccCcc--hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHccCCCCcceeEEec
Q 013332 131 --------V-PGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (445)
Q Consensus 131 --------~-~g~l~GrG~--kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~~~~~~d~~i~~~ 198 (445)
. ++++.|+.- +.++++++.+++.+++. .++.+++++|+..|| |..|++..... . .+|.+|..+
T Consensus 163 ~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~-~--~pd~~i~~D 237 (355)
T 3kl9_A 163 PDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTK-F--DPEVFLAVD 237 (355)
T ss_dssp ECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEEE
T ss_pred eccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhc-c--CCCEEEEec
Confidence 0 123444444 48888999999888754 578999999999999 66777655432 1 234444322
Q ss_pred ccCCCCCCceeeccCcccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEEcCC
Q 013332 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGG 278 (445)
Q Consensus 199 ~~~~~p~g~~~~~~g~~~~G~~~~~i~~~G~~~Has~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~ 278 (445)
.. |+..+
T Consensus 238 ~~-------------------------------~a~d~------------------------------------------ 244 (355)
T 3kl9_A 238 CS-------------------------------PAGDV------------------------------------------ 244 (355)
T ss_dssp EE-------------------------------ECCGG------------------------------------------
T ss_pred Cc-------------------------------cCCCC------------------------------------------
Confidence 10 11110
Q ss_pred ccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCCHHHHHHHHHHHHHhcCC
Q 013332 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGV 358 (445)
Q Consensus 279 ~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~ 358 (445)
|+. .. . .|-...+.. ... ....|+.+++.+++++++. |.
T Consensus 245 -----p~~----------------------~~--~-------lg~G~~i~~--~d~--~~~~~~~l~~~l~~~a~~~-gI 283 (355)
T 3kl9_A 245 -----YGG----------------------QG--K-------IGDGTLIRF--YDP--GHLLLPGMKDFLLTTAEEA-GI 283 (355)
T ss_dssp -----GTS----------------------SC--C-------TTSCEEEEE--EET--TEECCHHHHHHHHHHHHHT-TC
T ss_pred -----CCc----------------------cc--c-------cCCCcEEEE--ecC--CCCCCHHHHHHHHHHHHHc-CC
Confidence 000 00 0 011122222 111 2245788889998888887 87
Q ss_pred cccccCCCCCccchHHHHHh--h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013332 359 QNIKENRPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 426 (445)
Q Consensus 359 ~~~~~~~~~~g~tD~~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~~~~~~~~~i~~l 426 (445)
+... ...+|+||++.+.. . +|++.++++.. .+|++.|++.++++..+++++..++.++
T Consensus 284 p~q~--~~~ggGtDa~~i~~a~~Gipt~~igvp~~--------~~Hs~~E~~~~~Di~~~~~ll~~~l~~l 344 (355)
T 3kl9_A 284 KYQY--YCGKGGTDAGAAHLKNGGVPSTTIGVCAR--------YIHSHQTLYAMDDFLEAQAFLQALVKKL 344 (355)
T ss_dssp CEEE--EECSSCCTHHHHTTSTTCCCEEEEEEEEB--------SCSSSCEEEEHHHHHHHHHHHHHHHHTC
T ss_pred CEEE--ECCCcchHHHHHHHhCCCCCEEEEccCcC--------CCCCcceEeeHHHHHHHHHHHHHHHHHh
Confidence 6643 33468999999875 3 99998776643 3999999999999999999999988765
No 43
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.64 E-value=5.1e-15 Score=142.05 Aligned_cols=131 Identities=15% Similarity=0.040 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHhCCC---CCcchHHHHHHHHHHHHhCCCCeeecc-----------CCceEEEEEcCCCCcEEEEEEecc
Q 013332 50 YWMVNIRRKIHENPE---LGFQEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMD 115 (445)
Q Consensus 50 ~~~~~ll~~l~~ips---~s~~E~~~a~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~~~p~i~l~~H~D 115 (445)
+.+.+.+++|+++.+ .|..+.++++||.++|+++|++++++. ...||+|++++.+.+.|+|.+|+|
T Consensus 25 ~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 104 (309)
T 3tc8_A 25 DSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEeccc
Confidence 678888888887743 356788999999999999999987631 137999999876568999999999
Q ss_pred cccCCCCCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC-------------cc
Q 013332 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-------------GG 178 (445)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~-------------~G 178 (445)
+||.++. -|+. .++|++| +|+ ++++|++|.+++.|++.+ ++++|.|+++.+|| |. .|
T Consensus 105 sv~~~~~--~p~~-~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~G 178 (309)
T 3tc8_A 105 SRPYSDH--DPDP-SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLG 178 (309)
T ss_dssp CCSCCTT--CSSG-GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHH
T ss_pred CCCCCCC--Cccc-cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchh
Confidence 9997652 2333 4567888 888 589999999999999864 88999999999999 66 89
Q ss_pred HHHHHHcc
Q 013332 179 AKKMLDAG 186 (445)
Q Consensus 179 ~~~l~~~~ 186 (445)
++++.++.
T Consensus 179 S~~~~~~~ 186 (309)
T 3tc8_A 179 TQFWAKNP 186 (309)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhCC
Confidence 99998753
No 44
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.60 E-value=1.3e-14 Score=139.19 Aligned_cols=131 Identities=15% Similarity=0.079 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHhCCCC---CcchHHHHHHHHHHHHhCCCCeeecc-------C----CceEEEEEcCCCCcEEEEEEecc
Q 013332 50 YWMVNIRRKIHENPEL---GFQEFETSKLIRAELDQMGIPYKFPV-------A----VTGVVGYIGTGQPPFVALRADMD 115 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~---s~~E~~~a~~l~~~l~~~G~~~~~~~-------~----~~nvia~~~~~~~p~i~l~~H~D 115 (445)
+++++++++|+++++. |..+.++++||.++|+++|++++++. + ..||+|++++.+.+.|+|.+|+|
T Consensus 27 ~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 106 (314)
T 3gux_A 27 DSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHWD 106 (314)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEcccc
Confidence 7789999999998753 45678999999999999999987531 1 37999999776568999999999
Q ss_pred cccCCCCCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC--------------c
Q 013332 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--------------G 177 (445)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~--------------~ 177 (445)
+||.++. -|+. ..++. +++|+ ++++|++|.+++.|++. .++++|.|+++.+|| |. .
T Consensus 107 sv~~~~~--~p~~-~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~ 180 (314)
T 3gux_A 107 SRPYADN--DPDP-KNHHT-PILGVNDGASGVGVLLEIARQIQKE--QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCL 180 (314)
T ss_dssp CCC------------------------CHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSCCC-----------CTTSCH
T ss_pred CCCcCCC--Cccc-ccCCc-ccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEEEEECCccccccccccccccccccch
Confidence 9997642 1221 22333 45888 58999999999999986 488999999999999 66 8
Q ss_pred cHHHHHHcc
Q 013332 178 GAKKMLDAG 186 (445)
Q Consensus 178 G~~~l~~~~ 186 (445)
|++++.++.
T Consensus 181 GS~~~~~~~ 189 (314)
T 3gux_A 181 GSQYWARTP 189 (314)
T ss_dssp HHHHHHHSC
T ss_pred hHHHHHhCC
Confidence 999998753
No 45
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.59 E-value=4.9e-14 Score=137.40 Aligned_cols=66 Identities=17% Similarity=0.229 Sum_probs=59.9
Q ss_pred HHHHHHHHHhCCCCCcchH-HHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEecccccC
Q 013332 52 MVNIRRKIHENPELGFQEF-ETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM 119 (445)
Q Consensus 52 ~~~ll~~l~~ips~s~~E~-~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp~ 119 (445)
+++++++|+++||+|++|. ++++|++++|+++|++++++ ..+|+++++++.+ |+|+|.||||+|+.
T Consensus 11 ~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~D-~~GNvi~~~~g~~-~~v~l~aHmDtVg~ 77 (354)
T 2vpu_A 11 DWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGSS-PRIMVAAHMDKIGV 77 (354)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEEC-TTCCEEEEECCSS-SEEEEECCCCBCEE
T ss_pred HHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEEc-CCCeEEEEEcCCC-CEEEEEecccccce
Confidence 6889999999999999999 99999999999999988865 4789999997654 99999999999983
No 46
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.54 E-value=3.4e-14 Score=137.93 Aligned_cols=135 Identities=13% Similarity=0.174 Sum_probs=104.4
Q ss_pred hHHHHhhcCchhHHHH-HHHHHHHHhCCCC-CcchHHHHHHHHHHHHh--CCCCeeecc----------CCceEEEEEcC
Q 013332 37 VKFLDFAKKPEIFYWM-VNIRRKIHENPEL-GFQEFETSKLIRAELDQ--MGIPYKFPV----------AVTGVVGYIGT 102 (445)
Q Consensus 37 ~~~~~~~~~~~~~~~~-~~ll~~l~~ips~-s~~E~~~a~~l~~~l~~--~G~~~~~~~----------~~~nvia~~~~ 102 (445)
.++...++. +++ .+++++|+..+.. |..+.++++||.++|++ +|++++.+. ...||+|++++
T Consensus 22 ~~~~~~~~~----~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g 97 (329)
T 2afw_A 22 RQIAEGTSI----SEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNP 97 (329)
T ss_dssp HHHHHHCCH----HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESST
T ss_pred HHhhhhcCH----HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECC
Confidence 344445443 668 8889999755544 33456799999999999 999887632 14799999976
Q ss_pred CCCcEEEEEEecccccCCCCCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhc--------cccCCceEEEEEee
Q 013332 103 GQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF--------RHEIKGTIVLVFQP 171 (445)
Q Consensus 103 ~~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~--------~~~l~~~i~~i~~~ 171 (445)
.+.+.|+|.+|+|+||.+ .|. |++ |+|+ ++++|++|.+++.|++. +.+++++|.|++..
T Consensus 98 ~~~~~i~l~aH~Dsv~~~---~~~------~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~ 167 (329)
T 2afw_A 98 TAKRHLVLACHYDSKYFS---HWN------NRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFD 167 (329)
T ss_dssp TSSEEEEEEEECCCCCCC---CBT------TBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEES
T ss_pred CCCcEEEEEEeccCCCcC---ccc------CcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEec
Confidence 555899999999999975 352 554 8998 69999999999999875 24688999999999
Q ss_pred cCCC--------C-ccHHHHHHc
Q 013332 172 AEEG--------G-GGAKKMLDA 185 (445)
Q Consensus 172 dEEg--------~-~G~~~l~~~ 185 (445)
+||. + .|+++++++
T Consensus 168 ~EE~~~~~~~~~gl~Gs~~~~~~ 190 (329)
T 2afw_A 168 GEEAFLHWSPQDSLYGSRHLAAK 190 (329)
T ss_dssp CCSCSSSCCSSSSCHHHHHHHHH
T ss_pred CcccccccCCCccchhHHHHHHH
Confidence 9995 3 699999875
No 47
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.51 E-value=2.9e-13 Score=131.03 Aligned_cols=67 Identities=21% Similarity=0.194 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeeccCCceEEEEEcCCCCcEEEEEEeccccc
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA 118 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~p~i~l~~H~DtVp 118 (445)
..+.+++++|+++|++|++|.+++++++++|+++|.+++.+ ..+|+++++++ ++|+|+|.||||+|.
T Consensus 11 ~~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~D-~~Gnvi~~~g~-~~~~v~l~aHmDevG 77 (343)
T 3isx_A 11 HHMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRID-GLGNLIVWKGS-GEKKVILDAHIDEIG 77 (343)
T ss_dssp SCCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEEC-TTCCEEEEECC-CSSEEEEEEECCBCE
T ss_pred HHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEECC-CCCEEEEEecccccc
Confidence 45789999999999999999999999999999999988765 57899999854 459999999999996
No 48
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.24 E-value=1.8e-10 Score=110.60 Aligned_cols=131 Identities=16% Similarity=0.141 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHhC-CCC--CcchHHHHHHHHHHHHhCCCCeeec-------c----CCceEEEEEcCCCCcEEEEEEecc
Q 013332 50 YWMVNIRRKIHEN-PEL--GFQEFETSKLIRAELDQMGIPYKFP-------V----AVTGVVGYIGTGQPPFVALRADMD 115 (445)
Q Consensus 50 ~~~~~ll~~l~~i-ps~--s~~E~~~a~~l~~~l~~~G~~~~~~-------~----~~~nvia~~~~~~~p~i~l~~H~D 115 (445)
+.+.+.++.++++ |.+ |....++++||.+.|+++|++++.. . ...|||+++++...+.|+|.+|+|
T Consensus 25 ~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~D 104 (309)
T 4fuu_A 25 DSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeecC
Confidence 7788999999886 334 3345689999999999999998752 1 135999999876568999999999
Q ss_pred cccCCCCCCCccccCCCCccccCcc-h--HHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CC--------------c
Q 013332 116 ALAMEESVEWEHKSKVPGKMHACGH-D--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--------------G 177 (445)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~-k--g~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~--------------~ 177 (445)
++|.++..... .++.....|+ | .++|++|.+++.|++. +++.+|.|+|..+|| |. .
T Consensus 105 s~~~~~~~~~~----~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~ 178 (309)
T 4fuu_A 105 TRPWADNDADE----KNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCL 178 (309)
T ss_dssp CCSCCTTCSSG----GGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCH
T ss_pred CCCCCCCcccc----ccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhc
Confidence 99876532111 1122234576 2 7899999999999875 678999999999999 42 5
Q ss_pred cHHHHHHcc
Q 013332 178 GAKKMLDAG 186 (445)
Q Consensus 178 G~~~l~~~~ 186 (445)
|++++++..
T Consensus 179 GS~~~~~~~ 187 (309)
T 4fuu_A 179 GSQYWSRNP 187 (309)
T ss_dssp HHHHHHHSC
T ss_pred chhHHHhcc
Confidence 888887753
No 49
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.23 E-value=3.9e-11 Score=115.62 Aligned_cols=124 Identities=18% Similarity=0.224 Sum_probs=93.6
Q ss_pred HHHHH-HHHHHHhCCCC--CcchHHHHHHHHHHHHhC--CCCeeeccC----------CceEEEEEcCCCCcEEEEEEec
Q 013332 50 YWMVN-IRRKIHENPEL--GFQEFETSKLIRAELDQM--GIPYKFPVA----------VTGVVGYIGTGQPPFVALRADM 114 (445)
Q Consensus 50 ~~~~~-ll~~l~~ips~--s~~E~~~a~~l~~~l~~~--G~~~~~~~~----------~~nvia~~~~~~~p~i~l~~H~ 114 (445)
+.+.+ +|+.+ -+|.. |..+.++++||.++|+++ |++++.+.- ..||+|++++...+.|++.+|+
T Consensus 39 ~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~ 117 (330)
T 3pb6_X 39 QRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHY 117 (330)
T ss_dssp HHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEecc
Confidence 45555 56655 33333 445678999999999999 888775321 2699999977655899999999
Q ss_pred ccccCCCCCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhc-----cccCCceEEEEEeecCCC--------C-c
Q 013332 115 DALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF-----RHEIKGTIVLVFQPAEEG--------G-G 177 (445)
Q Consensus 115 DtVp~~~~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~-----~~~l~~~i~~i~~~dEEg--------~-~ 177 (445)
|+|+..+ |.-...|+ ..|+|++|.+++.|++. +..++.+|.|++..+||+ + .
T Consensus 118 Dsv~~~~-----------g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~ 186 (330)
T 3pb6_X 118 DSKLFPP-----------GSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLY 186 (330)
T ss_dssp CCCCCCT-----------TSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCH
T ss_pred CCCCCCC-----------CCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCc
Confidence 9997421 11245666 37999999999999873 357899999999999997 5 6
Q ss_pred cHHHHHHc
Q 013332 178 GAKKMLDA 185 (445)
Q Consensus 178 G~~~l~~~ 185 (445)
|+++++++
T Consensus 187 GS~~~a~~ 194 (330)
T 3pb6_X 187 GSRHLAQL 194 (330)
T ss_dssp HHHHHHHH
T ss_pred cHHHHHHH
Confidence 99998864
No 50
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.18 E-value=2.2e-10 Score=110.26 Aligned_cols=123 Identities=21% Similarity=0.253 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCCeeecc-----------CCceEEEEEcCCCCcEEEEEEeccc
Q 013332 50 YWMVNIRRKIHENPELGF--QEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMDA 116 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~--~E~~~a~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~~~p~i~l~~H~Dt 116 (445)
..+-++|..+. +|.+.+ ...++++||.+.|+++|++++... ...||||++++...+.|++.+|+|+
T Consensus 11 ~~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs 89 (312)
T 4f9u_A 11 VHFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDS 89 (312)
T ss_dssp HHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCC
T ss_pred HHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEec
Confidence 34555666654 576655 356899999999999999987521 1259999998765588999999999
Q ss_pred ccCCCCCCCccccCCCCccccCcc---hHHHHHHHHHHHHHHhc-----cccCCceEEEEEeecCC-C--------CccH
Q 013332 117 LAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF-----RHEIKGTIVLVFQPAEE-G--------GGGA 179 (445)
Q Consensus 117 Vp~~~~~~w~~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~-----~~~l~~~i~~i~~~dEE-g--------~~G~ 179 (445)
++.++.. -..|+ -.|+|++|.+++.|.+. +.+++++|.|++..+|| | ..|+
T Consensus 90 ~~~~~~~------------~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS 157 (312)
T 4f9u_A 90 KYFPNDP------------GFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGS 157 (312)
T ss_dssp CCCTTCT------------TCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHH
T ss_pred CCCCCCC------------CCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccCh
Confidence 9754311 13466 27899999999998752 34688999999999999 5 4699
Q ss_pred HHHHHc
Q 013332 180 KKMLDA 185 (445)
Q Consensus 180 ~~l~~~ 185 (445)
++++++
T Consensus 158 ~~~a~~ 163 (312)
T 4f9u_A 158 KHLAAK 163 (312)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 51
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.15 E-value=6.4e-10 Score=107.68 Aligned_cols=133 Identities=20% Similarity=0.248 Sum_probs=98.0
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCCeeecc-----------CCceEEEEEcCCC
Q 013332 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGF--QEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQ 104 (445)
Q Consensus 38 ~~~~~~~~~~~~~~~~~ll~~l~~ips~s~--~E~~~a~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~~ 104 (445)
+++++.+... ...+.++++.+. +|.+.| ...++++||.+.|+++|++++... ...||||+++++.
T Consensus 27 ~~~~~~~~~~-~~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~ 104 (330)
T 4fai_A 27 RFLEYSNLSD-KLHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNA 104 (330)
T ss_dssp HHHHHHTCCC-HHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTC
T ss_pred HHHhcccccH-HHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCC
Confidence 4555554432 155666677663 576654 346899999999999999987521 1259999997765
Q ss_pred CcEEEEEEecccccCCCCCCCccccCCCCccccCcc-h--HHHHHHHHHHHHHHhc---cccCCceEEEEEeecCCCC--
Q 013332 105 PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGH-D--AHVAMLLGAAKMLQVF---RHEIKGTIVLVFQPAEEGG-- 176 (445)
Q Consensus 105 ~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~-k--g~~aa~l~a~~~l~~~---~~~l~~~i~~i~~~dEEg~-- 176 (445)
...|++.+|+|+++..+. ...|+ | .|+|++|.+++.|++. +.+++.+|.|++..+||.+
T Consensus 105 ~~~i~l~aHyDs~~~~~~-------------~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~ 171 (330)
T 4fai_A 105 ERYLVLSCHYDSKYMPGV-------------EFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEE 171 (330)
T ss_dssp SEEEEEEEECCCCCCTTS-------------CCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSS
T ss_pred CcEEEEEEeecccccccC-------------CCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccccccc
Confidence 578999999999975321 13466 2 7899999999998753 4568899999999999933
Q ss_pred -------ccHHHHHHc
Q 013332 177 -------GGAKKMLDA 185 (445)
Q Consensus 177 -------~G~~~l~~~ 185 (445)
.|+++++++
T Consensus 172 ~~~~~~llGS~~~a~~ 187 (330)
T 4fai_A 172 WGPKDSIYGARHLAKK 187 (330)
T ss_dssp CBTTBSCHHHHHHHHH
T ss_pred ccccchhhhhHHHHhc
Confidence 599999874
No 52
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.10 E-value=8.3e-11 Score=90.94 Aligned_cols=77 Identities=14% Similarity=0.118 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCC--CCCCCCCCCCCCCchHHHHHHH
Q 013332 343 NLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKF--ETGHSPYFRVNEDALPYGAALH 419 (445)
Q Consensus 343 ~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~--~~~H~~~E~v~i~~l~~~~~~~ 419 (445)
++++.++++++++ |.++. +...+|+||+++|... +|++. || ||.. ..+|++||+|+++++.+++++|
T Consensus 2 ~~v~~l~~a~~~~-g~~~~--~~~~~g~TDar~~~~~gip~v~--fG-----Pg~~~~~~~H~~dE~v~i~~l~~~~~iy 71 (88)
T 1q7l_B 2 PWWAAFSRVCKDM-NLTLE--PEIMPAAGDNRYIRAVGVPALG--FS-----PMNRTPVLLHDHDERLHEAVFLRGVDIY 71 (88)
T ss_dssp HHHHHHHHHHHHT-TCCEE--EEECCSCSHHHHHHHTTCCEEE--EC-----CCCSCCCCTTSTTCEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHc-CCeeE--eeeeceeCcHHHHHHcCCCEEE--EC-----CCCCCcccccCCCCeeEHHHHHHHHHHH
Confidence 5899999999998 88763 4678999999999886 89765 56 3332 4799999999999999999999
Q ss_pred HHHHHHHHhh
Q 013332 420 ASLATRYLLE 429 (445)
Q Consensus 420 ~~~i~~l~~~ 429 (445)
++++.+++..
T Consensus 72 ~~~i~~~~~~ 81 (88)
T 1q7l_B 72 TRLLPALASV 81 (88)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHcC
Confidence 9999999875
No 53
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.71 E-value=3.7e-08 Score=98.61 Aligned_cols=105 Identities=17% Similarity=0.204 Sum_probs=76.9
Q ss_pred hCCCCCcchHHHHHHHHHHHH---h--CCCCeeecc----CCceEEEEEcCC-----CCcEEEEEEecccccCCCCCCCc
Q 013332 61 ENPELGFQEFETSKLIRAELD---Q--MGIPYKFPV----AVTGVVGYIGTG-----QPPFVALRADMDALAMEESVEWE 126 (445)
Q Consensus 61 ~ips~s~~E~~~a~~l~~~l~---~--~G~~~~~~~----~~~nvia~~~~~-----~~p~i~l~~H~DtVp~~~~~~w~ 126 (445)
.||..+-.. +.+++|.++++ + .+++++.+. ...||++++++. +.+.|++.+|+|+|+.
T Consensus 163 ~IP~~~Is~-~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~------- 234 (421)
T 2ek8_A 163 FVAAVGITK-QEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEK------- 234 (421)
T ss_dssp CCEEEEECH-HHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTT-------
T ss_pred CccEEEeCH-HHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCC-------
Confidence 445444333 34677888883 2 222332211 147999999662 3588999999999984
Q ss_pred cccCCCCccccCcc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHc
Q 013332 127 HKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDA 185 (445)
Q Consensus 127 ~~~~~~g~l~GrG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~ 185 (445)
|+|+ +++++++|.+++.|++. .++++|+|+++.+|| |..|+++++++
T Consensus 235 ----------g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 285 (421)
T 2ek8_A 235 ----------APGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAAS 285 (421)
T ss_dssp ----------CCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTT
T ss_pred ----------CCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHh
Confidence 4566 58999999999999874 578999999999999 66899999875
No 54
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.66 E-value=5.9e-08 Score=97.68 Aligned_cols=98 Identities=24% Similarity=0.281 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHhCC--CCeee--------ccCCceEEEEEcCCC--CcEEEEEEecccccCCCCCCCccccCCCCccccC
Q 013332 71 ETSKLIRAELDQMG--IPYKF--------PVAVTGVVGYIGTGQ--PPFVALRADMDALAMEESVEWEHKSKVPGKMHAC 138 (445)
Q Consensus 71 ~~a~~l~~~l~~~G--~~~~~--------~~~~~nvia~~~~~~--~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~Gr 138 (445)
+.++.|.+.|+. | +.++. .....||++++++.. .+.|++.+|+|+|+. |+
T Consensus 204 ~da~~L~~~l~~-g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~-----------------g~ 265 (444)
T 3iib_A 204 PDADLINAMLKR-DKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDE-----------------GT 265 (444)
T ss_dssp HHHHHHHHHHTT-TCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSS-----------------SC
T ss_pred HHHHHHHHHHhC-CCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCC-----------------CC
Confidence 446777777754 4 32222 112469999997653 478999999999984 35
Q ss_pred cc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC-CCccHHHHHHcc
Q 013332 139 GH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAG 186 (445)
Q Consensus 139 G~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE-g~~G~~~l~~~~ 186 (445)
|+ +++++++|.+++.|++.+.+++++|+|+++.+|| |..|+++++++.
T Consensus 266 Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~ 317 (444)
T 3iib_A 266 GAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEH 317 (444)
T ss_dssp CTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHT
T ss_pred CCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhh
Confidence 55 5899999999999999877899999999999999 668999999864
No 55
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=97.97 E-value=1.3e-05 Score=84.58 Aligned_cols=78 Identities=23% Similarity=0.239 Sum_probs=62.7
Q ss_pred CceEEEEEcCC--CCcEEEEEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHh---ccccCCceEEE
Q 013332 93 VTGVVGYIGTG--QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQV---FRHEIKGTIVL 167 (445)
Q Consensus 93 ~~nvia~~~~~--~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~---~~~~l~~~i~~ 167 (445)
..||+|++++. +.+.|++.+|+|+++.|. -.-..|++++|.+++.|.+ .+.+++++|+|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~Ga----------------~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f 375 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVFGA----------------IDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIF 375 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSSCT----------------TTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCCCC----------------ccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEE
Confidence 46999999775 247899999999997321 1113789999999999876 45689999999
Q ss_pred EEeecCC-CCccHHHHHHcc
Q 013332 168 VFQPAEE-GGGGAKKMLDAG 186 (445)
Q Consensus 168 i~~~dEE-g~~G~~~l~~~~ 186 (445)
++..+|| |..|+++++++.
T Consensus 376 ~~~~~EE~Gl~GS~~~~~~~ 395 (707)
T 3fed_A 376 ASWDAEEFGLLGSTEWAEEN 395 (707)
T ss_dssp EEESCGGGTSHHHHHHHHHH
T ss_pred EEeCCccccchhHHHHHHhc
Confidence 9999999 778999998753
No 56
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=97.89 E-value=1.9e-05 Score=82.31 Aligned_cols=78 Identities=22% Similarity=0.267 Sum_probs=63.0
Q ss_pred CceEEEEEcCC--CCcEEEEEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhc----cccCCceEE
Q 013332 93 VTGVVGYIGTG--QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVF----RHEIKGTIV 166 (445)
Q Consensus 93 ~~nvia~~~~~--~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~----~~~l~~~i~ 166 (445)
..||+|++++. +.+.|++.+|+|++..|.. .-..|++++|.+++.|++. +.+++++|+
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~Ga~----------------D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~ 329 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGPGAA----------------KSGVGTALLLKLAQMFSDMVLKDGFQPSRSII 329 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSCCTT----------------TTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEE
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCCCCC----------------cCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEE
Confidence 46999999775 2478999999999953210 0136899999999999864 568999999
Q ss_pred EEEeecCC-CCccHHHHHHcc
Q 013332 167 LVFQPAEE-GGGGAKKMLDAG 186 (445)
Q Consensus 167 ~i~~~dEE-g~~G~~~l~~~~ 186 (445)
|++..+|| |..|+++++++.
T Consensus 330 f~~~~~EE~gl~GS~~~~~~~ 350 (640)
T 3kas_A 330 FASWSAGDFGSVGATEWLEGY 350 (640)
T ss_dssp EEEESSGGGTSHHHHHHHHHT
T ss_pred EEEECCcccCchhHHHHHHhh
Confidence 99999999 778999999875
No 57
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=93.75 E-value=0.11 Score=52.05 Aligned_cols=80 Identities=14% Similarity=-0.047 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCC---CCCccchHHHHHh-h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 340 NNKNLHEHFQKVAADMLGVQNIKENR---PLMGTEDFSFFAE-A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 340 ~d~~l~~~~~~a~~~~~g~~~~~~~~---~~~g~tD~~~~~~-~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
.|+.+...+++++++. |.+...... ..+|+|++.+.+. . +|++.+|++.. .+|++.|-+..+++..
T Consensus 404 t~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~r--------yMHS~~E~~~~~D~~~ 474 (496)
T 3vat_A 404 SNAVSEALIREVASSV-GVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQL--------AMHSIRETACTTGVLQ 474 (496)
T ss_dssp CCHHHHHHHHHHHHHH-TCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEE--------STTSSSEEEESHHHHH
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHhcccCCcEEEecHhhh--------ccccHHHHhhHHHHHH
Confidence 4788999999999998 876543211 1357787766553 3 99988776654 3999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013332 415 GAALHASLATRYLL 428 (445)
Q Consensus 415 ~~~~~~~~i~~l~~ 428 (445)
+++++..++.++-.
T Consensus 475 ~v~Ll~af~~~~~~ 488 (496)
T 3vat_A 475 TITLFKGFFELFPS 488 (496)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHH
Confidence 99999999887643
No 58
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=93.34 E-value=0.047 Score=54.03 Aligned_cols=76 Identities=11% Similarity=-0.050 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCCC--CCccchHHHHHh--h-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 340 NNKNLHEHFQKVAADMLGVQNIKENRP--LMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 340 ~d~~l~~~~~~a~~~~~g~~~~~~~~~--~~g~tD~~~~~~--~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
.|+.+...+++++++. |.+....... .+||||++.+.. . +|++.+|++.. .+|++.|.+..+++..
T Consensus 343 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdiGip~~--------~mHS~~E~~~~~D~~~ 413 (428)
T 2ijz_A 343 TNSETAGFFRHLCQDS-EVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPTF--------AMHSIRELAGSHDLAH 413 (428)
T ss_dssp CCHHHHTTTTHHHHHT-CCCCCBCCCCSSCCCCCCCSTTTGGGGSCCEEEECCCCC--------SCSSSSCCCCSSHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEEeCCCCccchHHHHHHhCCCCCEEEEchhhc--------ccchHHHHhhHHHHHH
Confidence 6788999999999998 8865432111 567888887754 3 89887655543 4999999999999999
Q ss_pred HHHHHHHHHH
Q 013332 415 GAALHASLAT 424 (445)
Q Consensus 415 ~~~~~~~~i~ 424 (445)
+++++..++.
T Consensus 414 ~~~ll~af~~ 423 (428)
T 2ijz_A 414 LVKVLGAFYA 423 (428)
T ss_dssp HHTTHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999987754
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=92.82 E-value=0.15 Score=50.73 Aligned_cols=77 Identities=16% Similarity=0.018 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCC---CCCccchHHHHHhh--cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 340 NNKNLHEHFQKVAADMLGVQNIKENR---PLMGTEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 340 ~d~~l~~~~~~a~~~~~g~~~~~~~~---~~~g~tD~~~~~~~--ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
.++.+...+++++++. |.+...... ..+||+|.+.+... +|++-.|++.. .+|++.|-+..+++..
T Consensus 368 ~~~~~~~~~~~ia~~~-~Ip~Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGiP~l--------~MHS~~E~~~~~D~~~ 438 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQ-GVIWQVATLGKVDQGGGGTIAKFFAERGSDVIDMGPALL--------GMHSPFEISSKADLFE 438 (450)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEECCSSSTTSCCCCCTHHHHHTTTSCEEEEECEEB--------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeccCCCCCCCcHHHHHhCCCCcEEEechhhc--------ccchHHHHhhHHHHHH
Confidence 4788899999999998 887543111 14466666665533 99987766654 3999999999999999
Q ss_pred HHHHHHHHHHH
Q 013332 415 GAALHASLATR 425 (445)
Q Consensus 415 ~~~~~~~~i~~ 425 (445)
++++|..++.+
T Consensus 439 ~~~l~~af~~~ 449 (450)
T 2glf_A 439 TYVAYRSLMEK 449 (450)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 60
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=92.00 E-value=0.74 Score=44.84 Aligned_cols=70 Identities=19% Similarity=0.090 Sum_probs=49.9
Q ss_pred eEEEEE--cCCCCcEEEEEEecccccCCCCCCCccccCCCCccccCcchHHHHHHHHHHHHHHhccccCCceEEEEEeec
Q 013332 95 GVVGYI--GTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPA 172 (445)
Q Consensus 95 nvia~~--~~~~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~d 172 (445)
.-++.+ +|...+.|+|.+|+|+.-..+ +- -+|+|+++..++.|++. .++.+++|+|.++
T Consensus 167 l~y~e~~ipG~t~~~IllsaH~cHP~~AN-----------DN------aSG~a~lleLar~l~~~--~~~~t~rFvf~pg 227 (435)
T 3k9t_A 167 LTYGEYYIRGELEEEILLTTYTCHPSMCN-----------DN------LSGVALITFIAKALSKL--KTKYSYRFLFAPE 227 (435)
T ss_dssp EEEEEEEECCSSSCEEEEEEECCCCSCTT-----------TT------HHHHHHHHHHHHHHTTS--CCSSEEEEEEECT
T ss_pred eEEEEEEecCCCCCEEEEEEEcCCCCCCC-----------cc------chHHHHHHHHHHHHhcC--CCCceEEEEEcCc
Confidence 334444 665569999999999732111 11 16788999999999864 5789999999983
Q ss_pred CCCCccHHHHHHcc
Q 013332 173 EEGGGGAKKMLDAG 186 (445)
Q Consensus 173 EEg~~G~~~l~~~~ 186 (445)
..|+..++.+.
T Consensus 228 ---~iGS~~yl~~~ 238 (435)
T 3k9t_A 228 ---TIGSITWLSRN 238 (435)
T ss_dssp ---THHHHHHHHHC
T ss_pred ---cHHHHHHHHhC
Confidence 45888887654
No 61
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=91.73 E-value=0.08 Score=52.82 Aligned_cols=75 Identities=12% Similarity=-0.057 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCCC----CCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 340 NNKNLHEHFQKVAADMLGVQNIKENRP----LMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 340 ~d~~l~~~~~~a~~~~~g~~~~~~~~~----~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
.|.++...+++++++. |.+....... .+|+|++..+++. +|++.+|++.. .+|++.|.+..+++..
T Consensus 377 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~r~d~~~GgT~~~~~a~~Gi~tvdiGiP~~--------~mHS~~E~~~~~Di~~ 447 (458)
T 1y7e_A 377 ADAELVSYIRQLLNKN-NIAWQVATLGKVEEGGGGTVAKFLAGYGIRTIDMGPAVI--------SMHSPMEITSKFDLYN 447 (458)
T ss_dssp -CHHHHHHHHHHHHHH-TCCEEEEEECC-----CHHHHHHHHHHTCEEEEECCEEB--------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEeeccCCCCcCcHHHHHhCCCCCEEEEchhhc--------ccchHHHHhhHHHHHH
Confidence 4788999999999998 8875432111 4567777666655 99887666543 4999999999999999
Q ss_pred HHHHHHHHH
Q 013332 415 GAALHASLA 423 (445)
Q Consensus 415 ~~~~~~~~i 423 (445)
.++++..++
T Consensus 448 ~~~ll~af~ 456 (458)
T 1y7e_A 448 AYLAYKAFY 456 (458)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 999988764
No 62
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=90.88 E-value=0.37 Score=48.89 Aligned_cols=81 Identities=11% Similarity=-0.080 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHHHHhc-----CCcccccC---CCCCccchHHHHH-hh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 013332 340 NNKNLHEHFQKVAADML-----GVQNIKEN---RPLMGTEDFSFFA-EA-IPGYFYYLGMNDETKGKFETGHSPYFRVNE 409 (445)
Q Consensus 340 ~d~~l~~~~~~a~~~~~-----g~~~~~~~---~~~~g~tD~~~~~-~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i 409 (445)
.++.++..+++++++.. |.+..... ...+|+|++.+.. +. +|++.+|++.. .+|++.|-+..
T Consensus 472 tn~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~r--------yMHS~~E~~~~ 543 (571)
T 4eme_A 472 TSPLHASLIKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQL--------AMHSIREIAAV 543 (571)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEE--------STTSSSEEEEH
T ss_pred cCHHHHHHHHHHHHhcccccCCCCCEEEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhh--------ccchHHHHhhH
Confidence 46788888888888752 45432211 1145778776655 33 99988776654 39999999999
Q ss_pred CchHHHHHHHHHHHHHHHh
Q 013332 410 DALPYGAALHASLATRYLL 428 (445)
Q Consensus 410 ~~l~~~~~~~~~~i~~l~~ 428 (445)
.++..+++++..++.++-.
T Consensus 544 ~Dv~~~vkLl~aFl~~~~~ 562 (571)
T 4eme_A 544 HDVFFLIKGVFAFYTYYNQ 562 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHH
Confidence 9999999999999887643
No 63
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=87.33 E-value=2.4 Score=39.15 Aligned_cols=90 Identities=19% Similarity=0.139 Sum_probs=58.6
Q ss_pred CCHHHHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCC-----------CCC--CCCCCCCCCC
Q 013332 340 NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDE-----------TKG--KFETGHSPYF 405 (445)
Q Consensus 340 ~d~~l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~-----------~pG--~~~~~H~~~E 405 (445)
.++.+.+.+.+.+++. |.+.... ....+++|...|.+. +|++.++.+.... ..+ .....|++..
T Consensus 174 ~~~~l~~~~~~~~~~~-gi~~~~~-~~~~~~sD~~~f~~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D 251 (284)
T 1tkj_A 174 DDPVIEKTFKNYFAGL-NVPTEIE-TEGDGRSDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCD 251 (284)
T ss_dssp SSHHHHHHHHHHHHHH-TCCCEEC-CSSTTCSTHHHHHHTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTC
T ss_pred CCHHHHHHHHHHHHHc-CCCcccC-CCCCCCCchHHHHHCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcC
Confidence 3566777787777776 7654321 223456888777766 9998766552100 000 1245899987
Q ss_pred C---CCCCchHHHHHHHHHHHHHHHhhcC
Q 013332 406 R---VNEDALPYGAALHASLATRYLLENQ 431 (445)
Q Consensus 406 ~---v~i~~l~~~~~~~~~~i~~l~~~~~ 431 (445)
. ++.+.+...+++++.++..+.+.+.
T Consensus 252 ~~~~id~~~l~~~~~~~~~~~~~la~~~~ 280 (284)
T 1tkj_A 252 SLSNINDTALDRNSDAAAHAIWTLSSGTG 280 (284)
T ss_dssp STTSCCHHHHHHHHHHHHHHHHHHHC---
T ss_pred ChhhCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6 8899999999999999999886543
No 64
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=85.76 E-value=12 Score=37.19 Aligned_cols=118 Identities=12% Similarity=0.002 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc-------CCceEEEEEcCC-CCcEEEEEEecccccCCC
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTGVVGYIGTG-QPPFVALRADMDALAMEE 121 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~-------~~~nvia~~~~~-~~p~i~l~~H~DtVp~~~ 121 (445)
.+.+.+.|+|+..|.---.-...+++.++.+++.|+++++.+ +.+.+++.=.+. ..|.++...+- |.++
T Consensus 167 a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~---~~~~ 243 (491)
T 2hc9_A 167 SESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHE---VPGS 243 (491)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEEC---CTTC
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeC---CCCC
Confidence 667899999999998655567788999999999999998721 112222211121 22443333221 2111
Q ss_pred C-------CCCccccCCCCc-cc-c---Ccc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 122 S-------VEWEHKSKVPGK-MH-A---CGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 122 ~-------~~w~~~~~~~g~-l~-G---rG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
. .+-+|++ +|. |- + .++ .+|.|+.+++++++.+. +++.+|..++...|-
T Consensus 244 ~~~i~LVGKGiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l--~l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 244 TEHIALVGKGVVYDT--GGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKH--GFSQTLHACLCIVEN 307 (491)
T ss_dssp SCEEEEEEEEEEEEC--CTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTT--TCCSEEEEEEEEEEE
T ss_pred CCcEEEEcCceEecC--CCccCCCCcChhhccccccHHHHHHHHHHHHHHc--CCCceEEEEEEeeec
Confidence 0 0122321 121 11 1 123 49999999999999875 567888888887765
No 65
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=85.49 E-value=0.33 Score=48.44 Aligned_cols=75 Identities=11% Similarity=-0.005 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHHHHHhcCCcccc-cC---CCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCchHH
Q 013332 340 NNKNLHEHFQKVAADMLGVQNIK-EN---RPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 414 (445)
Q Consensus 340 ~d~~l~~~~~~a~~~~~g~~~~~-~~---~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~l~~ 414 (445)
.|..+...+++++++. |.+... .. ...+|||.+..+++. +|++-+|++.. .+|++.|.+..+++..
T Consensus 380 ~~~~~~~~l~~ia~~~-~Ip~Q~~~~gr~d~~~GgTig~~~a~~Gi~tvdiGiP~l--------~MHS~~E~~~~~Di~~ 450 (461)
T 2glj_A 380 ANPEYIAELRRILSKE-SVNWQTAELGKVDQGGGGTIAYILAEYGMQVIDCGVALL--------NMHAPWEISSKADIYE 450 (461)
T ss_dssp CCHHHHHHHHHHHHHT-CCCEEECCSSSSSSSCCCCTHHHHHTTTCBCCBBCCEEE--------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEeeeccCCCCcccHHHHHhCCCCCEEEEchhhc--------ccchHHHHhhHHHHHH
Confidence 4788899999999998 886543 11 113467766556555 89887555543 4999999999999999
Q ss_pred HHHHHHHHH
Q 013332 415 GAALHASLA 423 (445)
Q Consensus 415 ~~~~~~~~i 423 (445)
+++++..++
T Consensus 451 ~~~l~~af~ 459 (461)
T 2glj_A 451 TKNGYSAFL 459 (461)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHH
Confidence 999987653
No 66
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=81.44 E-value=23 Score=35.20 Aligned_cols=111 Identities=10% Similarity=-0.004 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc-------CCce--------------EEEEEcCC--CCc
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTG--------------VVGYIGTG--QPP 106 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~-------~~~n--------------via~~~~~--~~p 106 (445)
.+.+.+.|+|+..|.---.-...++..++.++++|+++++.+ +.+. ++-+|.+. ..+
T Consensus 204 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~ 283 (522)
T 4efd_A 204 ATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVK 283 (522)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCC
Confidence 567899999999998665667788899999999999998621 1112 22233221 123
Q ss_pred EEEEEEecccccCCCCCCCccccCCCCc-cc-cCc---c---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 107 FVALRADMDALAMEESVEWEHKSKVPGK-MH-ACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 107 ~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l~-GrG---~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
+|.|.|- +-+|+ .+|. |- +.| + .+|.|+.+++++++.+. +++.+|..++...|-
T Consensus 284 ~iaLVGK----------GITFD--SGGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l--~lpvnV~~vl~~~EN 345 (522)
T 4efd_A 284 KVSLVGK----------GIVYD--CGGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRL--QQPVQLSCTLCLAEN 345 (522)
T ss_dssp EEEEEEE----------EEETC--CCCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHH--TCSEEEEEEEEEEEC
T ss_pred cEEEecC----------ceEee--cCCccCCCccchhhcccccchHHHHHHHHHHHHHc--CCCceEEEEEEEecc
Confidence 4444432 12232 1221 11 112 2 38999999999998875 577888888877765
No 67
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=81.29 E-value=17 Score=36.17 Aligned_cols=113 Identities=10% Similarity=0.037 Sum_probs=72.2
Q ss_pred hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCCeeecc-------CCce--------------EEEEEcC-C-
Q 013332 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPV-------AVTG--------------VVGYIGT-G- 103 (445)
Q Consensus 48 ~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~-G~~~~~~~-------~~~n--------------via~~~~-~- 103 (445)
...+-+.+.|+|+..|.--..-...+++.++.++.. |+++++.+ +.+. ++-+|.+ +
T Consensus 178 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 257 (497)
T 3h8g_F 178 AIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKK 257 (497)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCT
T ss_pred HHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCC
Confidence 446788999999999986666677889999999998 99988621 1111 2223321 1
Q ss_pred CCcEEEEEEecccccCCCCCCCccccCCCCc-cc-cCc---c---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 104 QPPFVALRADMDALAMEESVEWEHKSKVPGK-MH-ACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 104 ~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l~-GrG---~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
..++|.|.|- +-+|++ +|. |- +.| + .+|.|+.+++++++.+. +++.+|..++...|-
T Consensus 258 ~~~~i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l--~l~vnv~~~i~~~EN 322 (497)
T 3h8g_F 258 ADKPFVLVGK----------GITFDT--GGISLKPGAGMDEMKYDMCGAASVFGTLRAVLEL--QLPVNLVCLLACAEN 322 (497)
T ss_dssp TSCCEEEEEE----------EEEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEEE
T ss_pred CCCcEEEEcC----------ceEecc--CCccCCCccchhhccccchHHHHHHHHHHHHHHc--CCCeEEEEEEEeecc
Confidence 1234444443 222331 121 11 222 2 38999999999999876 567888888887765
No 68
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=80.41 E-value=19 Score=35.91 Aligned_cols=113 Identities=12% Similarity=0.069 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCC--CCeeecc-------CCce--------------EEEEEcC-C
Q 013332 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG--IPYKFPV-------AVTG--------------VVGYIGT-G 103 (445)
Q Consensus 48 ~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G--~~~~~~~-------~~~n--------------via~~~~-~ 103 (445)
...+-+.+.|+|+..|.--..-...+++.++.+++.| +++++.+ +.+. ++-+|.+ +
T Consensus 179 ~~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~ 258 (503)
T 1gyt_A 179 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA 258 (503)
T ss_dssp HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCC
Confidence 3467789999999999865555678889999999999 8888621 1111 2223311 1
Q ss_pred --CCcEEEEEEecccccCCCCCCCccccCCCCc-cc-cCcc------hHHHHHHHHHHHHHHhccccCCceEEEEEeecC
Q 013332 104 --QPPFVALRADMDALAMEESVEWEHKSKVPGK-MH-ACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAE 173 (445)
Q Consensus 104 --~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l~-GrG~------kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dE 173 (445)
..++|+|.|- +-+|++ +|. |- +.|+ .+|.|+.+++++++.+. +++.+|..+....|
T Consensus 259 ~~~~~~i~LVGK----------GITFDs--GGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l--~l~vnV~~~i~~~E 324 (503)
T 1gyt_A 259 SEDARPIVLVGK----------GLTFDS--GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAEL--QLPINVIGVLAGCE 324 (503)
T ss_dssp CTTCCCEEEEEE----------EEEEEC--CTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEE
T ss_pred CCCCCcEEEEcC----------ceEecC--CCccccCCcChhhcccccchHHHHHHHHHHHHHc--CCCeeEEEEEEeec
Confidence 1133444432 223331 221 11 2232 39999999999999876 56788888888776
Q ss_pred C
Q 013332 174 E 174 (445)
Q Consensus 174 E 174 (445)
=
T Consensus 325 N 325 (503)
T 1gyt_A 325 N 325 (503)
T ss_dssp E
T ss_pred c
Confidence 6
No 69
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=80.08 E-value=20 Score=35.62 Aligned_cols=113 Identities=14% Similarity=0.046 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCCeeecc-------CCce--------------EEEEEcC-CC
Q 013332 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPV-------AVTG--------------VVGYIGT-GQ 104 (445)
Q Consensus 48 ~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~-G~~~~~~~-------~~~n--------------via~~~~-~~ 104 (445)
...+-+.+.|+|+..|.--..-...+++.++.+++. |+++++.+ +.+. ++-+|.+ +.
T Consensus 174 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 253 (490)
T 3jru_B 174 ATAEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGGD 253 (490)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTTT
T ss_pred HHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCCC
Confidence 346788999999999986666677888999988887 99987621 1111 2222321 11
Q ss_pred CcEEEEEEecccccCCCCCCCccccCCCCc-cc-cCc---c---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 105 PPFVALRADMDALAMEESVEWEHKSKVPGK-MH-ACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 105 ~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l~-GrG---~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
.++|.|.|- +-+|++ +|. |- +.| + .+|.|+.+++++++.+. +++.+|..++...|-
T Consensus 254 ~~~i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l--~l~vnv~~~i~~~EN 317 (490)
T 3jru_B 254 ARPYVLVGK----------GITFDT--GGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKA--ELPINLVVVVPAVEN 317 (490)
T ss_dssp SCCEEEEEC----------EEEEEC--CTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred CCcEEEEcC----------eeEecC--CCccCCCcccHhhCcccchHHHHHHHHHHHHHHc--CCCcEEEEEEEeecc
Confidence 233444332 223331 121 11 222 2 39999999999999886 567888888877765
No 70
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=78.78 E-value=22 Score=35.03 Aligned_cols=118 Identities=14% Similarity=0.132 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc------CCceEEEEEcCC-CCcEEEEEEecccccCCCC
Q 013332 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYIGTG-QPPFVALRADMDALAMEES 122 (445)
Q Consensus 50 ~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~------~~~nvia~~~~~-~~p~i~l~~H~DtVp~~~~ 122 (445)
.+.+.+.|+|+..|.---.-...+++.++.+++.|+++++.+ +.+.+++.=.+. ..|.++...+ -|.+..
T Consensus 167 a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y---~~~~~~ 243 (482)
T 3ij3_A 167 LTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKW---GDIKAP 243 (482)
T ss_dssp HHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEE---SCTTSC
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEe---CCCCCC
Confidence 667899999999997555556788889999999999987621 111122111122 2344444433 121100
Q ss_pred ------CCCccccCCCCc-cc-cC---cc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 123 ------VEWEHKSKVPGK-MH-AC---GH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 123 ------~~w~~~~~~~g~-l~-Gr---G~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
.+-+|++ +|. |- +. ++ .+|.|+.+++++++.+. +++.+|..++...|-
T Consensus 244 ~i~LVGKGITFDs--GGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l--~lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 244 KVTLVGKGVCFDS--GGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQ--QLPVRLRLLIPAVEN 305 (482)
T ss_dssp EEEEEECEEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred eEEEEccceEeec--CCccCcCccchhhccccchHHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 0112221 121 11 11 22 38999999999999876 577889888877765
No 71
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=78.12 E-value=5.4 Score=39.65 Aligned_cols=119 Identities=14% Similarity=0.111 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCC--CCeeecc-------CCceEEEEEcCC-CCcEEEEEEeccccc
Q 013332 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG--IPYKFPV-------AVTGVVGYIGTG-QPPFVALRADMDALA 118 (445)
Q Consensus 49 ~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G--~~~~~~~-------~~~nvia~~~~~-~~p~i~l~~H~DtVp 118 (445)
..+-+.+.|+|+..|.--..-...+++.++.+++.| +++++.+ +.+.+++.=.++ ..|.++...+- |
T Consensus 160 ~a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~---g 236 (484)
T 1lam_A 160 FASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYK---G 236 (484)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEE---C
T ss_pred HHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEEC---C
Confidence 367789999999999865556778889999999999 8887621 122222211122 23444433221 1
Q ss_pred CC-CC--------CCCccccCCCCc-cc-cCc---c---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 119 ME-ES--------VEWEHKSKVPGK-MH-ACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 119 ~~-~~--------~~w~~~~~~~g~-l~-GrG---~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
.+ +. .+-+|++ +|. |- +.| + .+|.|+.+++++++.+. +++.+|..++...|-
T Consensus 237 ~~~~~~~~i~LVGKGITFDs--GG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l--~l~vnv~~~i~~~EN 305 (484)
T 1lam_A 237 SPNASEPPLVFVGKGITFDS--GGISIKAAANMDLMRADMGGAATICSAIVSAAKL--DLPINIVGLAPLCEN 305 (484)
T ss_dssp SSSTTSCCEEEEECEEEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred CCCCCCCcEEEEecceEEcC--CCcCCcCccchhhhhccchHHHHHHHHHHHHHHc--CCCeeEEEEEEeecc
Confidence 11 00 0223331 221 11 222 2 39999999999999876 567888888887765
No 72
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=77.20 E-value=0.62 Score=45.96 Aligned_cols=61 Identities=11% Similarity=0.123 Sum_probs=40.4
Q ss_pred HHHhCCCCCcchHHHHHHHHHHHHhCCC---------------CeeeccCCceEEEEEcCCC----CcEEEEEEeccccc
Q 013332 58 KIHENPELGFQEFETSKLIRAELDQMGI---------------PYKFPVAVTGVVGYIGTGQ----PPFVALRADMDALA 118 (445)
Q Consensus 58 ~l~~ips~s~~E~~~a~~l~~~l~~~G~---------------~~~~~~~~~nvia~~~~~~----~p~i~l~~H~DtVp 118 (445)
+++++=.-|.-+..+.++++++|++.|| ++..+...+|+++...+.+ .+.+++.+|+|.+.
T Consensus 7 ~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dspg 86 (428)
T 2ijz_A 7 GLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSPC 86 (428)
T ss_dssp -CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCSE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcCC
Confidence 3444444455677788888888888887 2222233378999874432 37899999999983
No 73
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=76.79 E-value=3.1 Score=41.16 Aligned_cols=82 Identities=24% Similarity=0.222 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCC---CCCCCCCchHHHHHHH
Q 013332 344 LHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSP---YFRVNEDALPYGAALH 419 (445)
Q Consensus 344 l~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~---~E~v~i~~l~~~~~~~ 419 (445)
+++.+.+.++.. |.... .....+++|...|.+. +|++.++..... .....|++ -++++.+.|....+++
T Consensus 351 ~~~~~~~~~~~~-g~~~~--~~~~~~~SD~~~f~~~GiP~~~l~~~~~~----~~~~yHt~~Dt~d~id~~~l~~~~~~~ 423 (444)
T 3iib_A 351 PVINAMKVAEPL-GVAAG--NNKASGGPDVSMLPALGVPVASLRQDGSD----YFDYHHTPNDTLDKINPEALAQNVAVY 423 (444)
T ss_dssp HHHHHGGGGGGG-TCEEC--CSCCCCCGGGTTSGGGTCCEEEEEECCTT----GGGTTTSTTCCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc-CCccc--cCCCCCCCccHHHHHCCCCEEEeecCCCc----CCCCCCCCccccccCCHHHHHHHHHHH
Confidence 444444444333 54331 2356778998888877 999866543211 11358988 5688999999999999
Q ss_pred HHHHHHHHhhcCC
Q 013332 420 ASLATRYLLENQP 432 (445)
Q Consensus 420 ~~~i~~l~~~~~~ 432 (445)
+.++..+.+.+..
T Consensus 424 ~~~v~~lA~~~~~ 436 (444)
T 3iib_A 424 AQFAWVMANSKVE 436 (444)
T ss_dssp HHHHHHHHHCCCC
T ss_pred HHHHHHHhcCCCC
Confidence 9999999876543
No 74
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=76.54 E-value=25 Score=34.99 Aligned_cols=113 Identities=14% Similarity=0.055 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc-------CCce--------------EEEEEcC-C-C
Q 013332 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTG--------------VVGYIGT-G-Q 104 (445)
Q Consensus 48 ~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~-------~~~n--------------via~~~~-~-~ 104 (445)
...+.+.+.|+|+..|.--..-...+++.++.+++.|+++++.+ +.+. ++-+|.+ + .
T Consensus 195 ~~a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 274 (515)
T 3kzw_A 195 SIGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKD 274 (515)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSS
T ss_pred HHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCC
Confidence 34677889999999998666667788999999999999988621 1111 2222211 1 1
Q ss_pred CcEEEEEEecccccCCCCCCCccccCCCCc-cc-c---Ccc---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 105 PPFVALRADMDALAMEESVEWEHKSKVPGK-MH-A---CGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 105 ~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l~-G---rG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
.++|+|.|- +-+|++ +|. |- + .++ .+|.|+.+++++++.+. +++.+|..++...|-
T Consensus 275 ~~~i~LVGK----------GiTFDs--GG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l--~lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 275 EAPIALVGK----------GITYDS--GGYSIKTKNGMATMKFDMCGAANVVGIIEAASRL--QLPVNIVGVLACAEN 338 (515)
T ss_dssp CCCEEEEEE----------EEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHT--TCSCEEEEEEEEEEE
T ss_pred CCcEEEecC----------ceEEec--CCcCCCCccChhhchhchHHHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 233444332 122321 121 11 1 123 38999999999999876 567888888877765
No 75
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=76.17 E-value=11 Score=34.94 Aligned_cols=90 Identities=9% Similarity=0.006 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHHHhc-CCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCCCCCCc-----hH
Q 013332 341 NKNLHEHFQKVAADML-GVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDA-----LP 413 (445)
Q Consensus 341 d~~l~~~~~~a~~~~~-g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~v~i~~-----l~ 413 (445)
++.+.+.+.+++++.. +.+.... ....+++|...|.+. +|++.++..... +.....|++.+.++.-+ +.
T Consensus 198 ~~~l~~~l~~~a~~~~~~i~~~~~-~~~~~~sD~~~f~~~GiP~~~~~~~~~~---~~~~~yHt~~Dt~~~~d~~~~~~~ 273 (299)
T 1rtq_A 198 DSNFTQYLTQLMDEYLPSLTYGFD-TCGYACSDHASWHNAGYPAAMPFESKFN---DYNPRIHTTQDTLANSDPTGSHAK 273 (299)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEE-CCSSCCSTHHHHHHTTCCEECEESSCGG---GSCTTTTSTTCCGGGSCTTCHHHH
T ss_pred CchHHHHHHHHHHHhCccCCcccC-CCCCCCCcHHHHHHCCCCEEEecccccc---cCCCCCCCccccccccCccHHHHH
Confidence 4667777777776652 2222111 123367898777776 998755432111 01245899998876544 48
Q ss_pred HHHHHHHHHHHHHHhhcCCCc
Q 013332 414 YGAALHASLATRYLLENQPKT 434 (445)
Q Consensus 414 ~~~~~~~~~i~~l~~~~~~~~ 434 (445)
..++++..++.++...+....
T Consensus 274 ~~~~l~~~~~~~La~~~~~~~ 294 (299)
T 1rtq_A 274 KFTQLGLAYAIEMGSATGDTP 294 (299)
T ss_dssp HHHHHHHHHHHHHHHCCC---
T ss_pred HHHHHHHHHHHHHhCCCcCCC
Confidence 889999999999887655443
No 76
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=76.07 E-value=22 Score=35.25 Aligned_cols=113 Identities=14% Similarity=0.085 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCCeeecc-------CCce--------------EEEEEcC-C-
Q 013332 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPV-------AVTG--------------VVGYIGT-G- 103 (445)
Q Consensus 48 ~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~-G~~~~~~~-------~~~n--------------via~~~~-~- 103 (445)
...+-+.+.|+|+..|.--..-...+++.++.++.. |+++++.+ +.+. ++-+|.+ +
T Consensus 162 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 241 (486)
T 3pei_A 162 AIACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNE 241 (486)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCT
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCC
Confidence 346778999999999986556677888999999988 89988621 1111 2222311 1
Q ss_pred CCcEEEEEEecccccCCCCCCCccccCCCCc-cc-cCc---c---hHHHHHHHHHHHHHHhccccCCceEEEEEeecCC
Q 013332 104 QPPFVALRADMDALAMEESVEWEHKSKVPGK-MH-ACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (445)
Q Consensus 104 ~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l~-GrG---~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~dEE 174 (445)
..++|.|.|- +-+|++ +|. |- +.| + .+|.|+.+++++++.+. +++.+|..+....|-
T Consensus 242 ~~~~i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l--~l~vnv~~~i~~~EN 306 (486)
T 3pei_A 242 GDAPIVLVGK----------GLVFDN--GGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAML--NLPVNVVGVMGLAEN 306 (486)
T ss_dssp TSCCEEEEEE----------EEETEE--CC------------EECSHHHHHHHHHHHHHHHH--TCSSEEEEEEEEEEC
T ss_pred CCCcEEEEcc----------ceEEec--CCcccCCccchhhhhccchHHHHHHHHHHHHHHc--CCCcEEEEEEEeecc
Confidence 1233444432 222331 121 11 122 2 39999999999999876 577888888887765
No 77
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=75.90 E-value=5.2 Score=39.55 Aligned_cols=53 Identities=19% Similarity=0.118 Sum_probs=38.2
Q ss_pred CcchHHHHHHHHHHHHhCCCCee--e-----------ccCCceEEEEEcCCC--CcEEEEEEeccccc
Q 013332 66 GFQEFETSKLIRAELDQMGIPYK--F-----------PVAVTGVVGYIGTGQ--PPFVALRADMDALA 118 (445)
Q Consensus 66 s~~E~~~a~~l~~~l~~~G~~~~--~-----------~~~~~nvia~~~~~~--~p~i~l~~H~DtVp 118 (445)
|.-+..+.+++++.|++.||.-- . +....|++|...+++ .+.+++.+|+|-+.
T Consensus 30 s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp~ 97 (450)
T 2glf_A 30 AKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSPR 97 (450)
T ss_dssp CSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCCE
T ss_pred CCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccCC
Confidence 33568899999999999999641 1 111368999875432 36899999999873
No 78
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=73.50 E-value=52 Score=32.79 Aligned_cols=116 Identities=13% Similarity=0.102 Sum_probs=70.9
Q ss_pred chhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeeecc-------CCce--------------EEEEEcCC-
Q 013332 46 PEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTG--------------VVGYIGTG- 103 (445)
Q Consensus 46 ~~~~~~~~~ll~~l~~ips~s~~E~~~a~~l~~~l~~~G~~~~~~~-------~~~n--------------via~~~~~- 103 (445)
-+...+-+.+.|+|+..|.--..-...++..++.++++|+++++.+ +.+. ++-+|.+.
T Consensus 201 ~~~~a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~ 280 (528)
T 3kr4_A 201 ARVYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKG 280 (528)
T ss_dssp HHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCC
Confidence 3344678899999999998655666778888888888999988621 1111 23333221
Q ss_pred -CCcEEEEEEecccccCCCCCCCccccCCCCc-cc---c---Ccc---hHHHHHHHHHHHHHHhccccCCceEEEEEeec
Q 013332 104 -QPPFVALRADMDALAMEESVEWEHKSKVPGK-MH---A---CGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPA 172 (445)
Q Consensus 104 -~~p~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l~---G---rG~---kg~~aa~l~a~~~l~~~~~~l~~~i~~i~~~d 172 (445)
..++|.|.|- +-+|++ +|. |- | .++ .+|.|+.+++++++.+.+ .++-+|..++...
T Consensus 281 ~~~~~iaLVGK----------GITFDs--GG~slKp~~g~~M~~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~ 347 (528)
T 3kr4_A 281 DVKKKIALVGK----------GITFDS--GGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVC 347 (528)
T ss_dssp CCCEEEEEEEE----------EEEEEC--CTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEE
T ss_pred CCCCcEEEecC----------ceEeec--CCcccCCCCCcCHHHhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEee
Confidence 1245555543 223331 121 11 1 123 389999999999988764 2246777777766
Q ss_pred CC
Q 013332 173 EE 174 (445)
Q Consensus 173 EE 174 (445)
|-
T Consensus 348 EN 349 (528)
T 3kr4_A 348 EN 349 (528)
T ss_dssp EE
T ss_pred cc
Confidence 55
No 79
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=70.89 E-value=2.6 Score=41.84 Aligned_cols=50 Identities=12% Similarity=0.117 Sum_probs=34.0
Q ss_pred cchHHHHHHHHHHHHhCCCC-------------eeeccCCceEEEEE--cCC---CCcEEEEEEeccccc
Q 013332 67 FQEFETSKLIRAELDQMGIP-------------YKFPVAVTGVVGYI--GTG---QPPFVALRADMDALA 118 (445)
Q Consensus 67 ~~E~~~a~~l~~~l~~~G~~-------------~~~~~~~~nvia~~--~~~---~~p~i~l~~H~DtVp 118 (445)
.-+..+.++++++|++.||. +..+ ..+|.++.+ +.. .++. ++.+|+|...
T Consensus 33 pT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~-r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dspg 100 (458)
T 1y7e_A 33 KTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYT-CREKSVAFAIIGKNPIEDGMN-FIVSHTDSPR 100 (458)
T ss_dssp CSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECB-CSSSCBCCEECCSSCGGGCCE-ECCCBCCCCB
T ss_pred CCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEE-CCCCEEEEEEeCCCCCCCCcE-EEEEccCcCC
Confidence 34578999999999999986 2222 234555544 332 2455 9999999984
No 80
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=65.95 E-value=9.3 Score=40.09 Aligned_cols=53 Identities=21% Similarity=0.253 Sum_probs=43.5
Q ss_pred cccchHHHHhhcCchhHHHHHHHHHHHHhCCCCCcc--hHHHHHHHHHHHHhCCCC-eee
Q 013332 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIP-YKF 89 (445)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~ips~s~~--E~~~a~~l~~~l~~~G~~-~~~ 89 (445)
+++.+.+++.++. +.+.+.++.|.++|-.+|- +.++++|+++.|++.|++ ++.
T Consensus 12 ~~l~~~~~~~~~~----~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 12 QSIRWKLVSEMKA----ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp -CHHHHHHHHCCH----HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCH----HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 3566777777776 6699999999999988874 578899999999999999 654
No 81
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=64.48 E-value=33 Score=23.92 Aligned_cols=63 Identities=19% Similarity=0.305 Sum_probs=42.2
Q ss_pred CcEEEEEEEecCChhhHHHHHHHHHhHHHHHHHHHhhCCeEEEEecccCCCCcccCC---HHHHHHHHHHHHHhcCCcc
Q 013332 285 DSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQASVQRCNATVTFDDKSFYPVTVNN---KNLHEHFQKVAADMLGVQN 360 (445)
Q Consensus 285 ~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d---~~l~~~~~~a~~~~~g~~~ 360 (445)
+--++.+|+|...+...+..++++++ .+.... .-.+.+... ..+| .++...+.+.++++ |...
T Consensus 15 dgqeieidirvstgkeleralqelek--alarag---arnvqitis-------aendeqakelleliarllqkl-gykd 80 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEK--ALARAG---ARNVQITIS-------AENDEQAKELLELIARLLQKL-GYKD 80 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHH--HHHHHT---CSEEEEEEE-------CSSHHHHHHHHHHHHHHHHHH-TCSE
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHH--HHHhcc---ccceEEEEE-------ecChHHHHHHHHHHHHHHHHh-CCCc
Confidence 44789999999999999999999988 665431 123444431 1222 35777777777776 7654
No 82
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=59.63 E-value=25 Score=34.23 Aligned_cols=74 Identities=14% Similarity=0.078 Sum_probs=50.4
Q ss_pred HHHHHHHhcCCcccccCCCCCccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCCC---CCCCchHHHHHHHHHHH
Q 013332 348 FQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFR---VNEDALPYGAALHASLA 423 (445)
Q Consensus 348 ~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E~---v~i~~l~~~~~~~~~~i 423 (445)
..+.++++ |.+ . .....+++|...|.+. +|++.+. +... ....|++... ++.+.+...++++..++
T Consensus 327 ~~~~~~~~-~~~-~--~~~~~~~SD~~~F~~~GIP~~~~~-~~~~-----~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~ 396 (421)
T 2ek8_A 327 GAAASSRL-SGV-L--PYGQEGRSDHESFHALGIPAALFI-HAPV-----EPWYHTPNDTLDKISKEKLDNVADIVGSAV 396 (421)
T ss_dssp HHHHHHHH-TSC-C--CEEECCSSTHHHHHTTTCCEEEEE-EESC-----CTTTTSTTCCGGGBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CCC-C--CCCCCCCCccHHHHHCCCCEEEEE-CCcC-----CCCCCCcccchhhCCHHHHHHHHHHHHHHH
Confidence 34445554 664 2 2234567888777766 9998654 2211 1347998887 88899999999999999
Q ss_pred HHHHhhcC
Q 013332 424 TRYLLENQ 431 (445)
Q Consensus 424 ~~l~~~~~ 431 (445)
.++.+.+.
T Consensus 397 ~~la~~~~ 404 (421)
T 2ek8_A 397 YQAARPGE 404 (421)
T ss_dssp HHHHSSSC
T ss_pred HHHhCCCc
Confidence 99886544
No 83
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=48.05 E-value=25 Score=34.96 Aligned_cols=44 Identities=16% Similarity=0.134 Sum_probs=37.6
Q ss_pred CeeEEEEEEEcCCccccccCcEEEEEEEecCChhhHHHHHHHHHhHHHHHHH
Q 013332 266 SQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEWQVVMKQ 317 (445)
Q Consensus 266 ~~t~~i~~i~gG~~~NviP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~ 317 (445)
..++|++.++ .-++.+++.+++|+++..+.+++.+++++ +++..
T Consensus 347 ~~S~n~gv~~------~~~~~~~~~~~~R~~~~~~~~~i~~~l~~--~~~~~ 390 (490)
T 3mru_A 347 ETSLNVGVIT------TEENKVTVLCLIRSLIDSGRSQVEGMLQS--VAELA 390 (490)
T ss_dssp EEEEEEEEEE------EETTEEEEEEEEEESSHHHHHHHHHHHHH--HHHHT
T ss_pred eEEEEEEEEE------EeCCEEEEEEEcCCCCchHHHHHHHHHHH--HHHHc
Confidence 5788888866 33778999999999999999999999999 88754
No 84
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=42.67 E-value=46 Score=30.70 Aligned_cols=61 Identities=11% Similarity=0.122 Sum_probs=45.0
Q ss_pred CccchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCC---CCCCCchHHHHHHHHHHHHHHHhhcCCCc
Q 013332 368 MGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYF---RVNEDALPYGAALHASLATRYLLENQPKT 434 (445)
Q Consensus 368 ~g~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E---~v~i~~l~~~~~~~~~~i~~l~~~~~~~~ 434 (445)
.+.+|-..|.+. ||++.+..+.- ....|+++- +++.+.|....+++..++.+++..+..+.
T Consensus 241 ~~~SDH~pF~~~GIP~l~~~~~~~------~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~~~~P~ 305 (312)
T 4f9u_A 241 LVDDDHRPFLDENVPVLHLVATPF------PDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRHTSPV 305 (312)
T ss_dssp CCCCTTHHHHTTTCCEEEEECSSC------CTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHHCCSCC
T ss_pred CCCCchHHHHHCCCCEEEEECCCC------CCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 345677667666 99987653321 134788764 57889999999999999999998877665
No 85
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=42.54 E-value=13 Score=36.76 Aligned_cols=47 Identities=13% Similarity=0.118 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhCCCCeeec-----------------cCCce-EEEEEcCCC---CcEEEEEEecccc
Q 013332 70 FETSKLIRAELDQMGIPYKFP-----------------VAVTG-VVGYIGTGQ---PPFVALRADMDAL 117 (445)
Q Consensus 70 ~~~a~~l~~~l~~~G~~~~~~-----------------~~~~n-via~~~~~~---~p~i~l~~H~DtV 117 (445)
..+.++++++|++.||+ +.. +..+| +++...+.+ .+.+++.+|+|.+
T Consensus 38 ~hav~~~~~~l~~sGfe-~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 38 RECVTELIKTAEKSGYR-NIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSP 105 (461)
T ss_dssp SSTHHHHHHHSCCSSCC-CTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCh-hHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcC
Confidence 35788899999999987 321 01234 777654431 2348899999876
No 86
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=38.23 E-value=88 Score=28.86 Aligned_cols=81 Identities=15% Similarity=0.095 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhcCCcccccC-CCCCccchHHHHHh-h-cCeEEEE-ecCCCCCCCCCCCCCCCC---CCCCCCchHHH
Q 013332 343 NLHEHFQKVAADMLGVQNIKEN-RPLMGTEDFSFFAE-A-IPGYFYY-LGMNDETKGKFETGHSPY---FRVNEDALPYG 415 (445)
Q Consensus 343 ~l~~~~~~a~~~~~g~~~~~~~-~~~~g~tD~~~~~~-~-ip~~~~~-~G~~~~~pG~~~~~H~~~---E~v~i~~l~~~ 415 (445)
.+++.+.+.++.+ |....... ......+|-..|.+ . +|++.+. +++... -+.....|+++ |.|+.+.|...
T Consensus 221 ~l~~~~~~~a~~~-g~~~~f~~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~-~~~~~~~Ht~~Dt~d~id~~~l~~~ 298 (309)
T 3tc8_A 221 PIVEMVWSAARDL-GYGKYFINAAGGAITDDHQYVISGRNIPSIDIINYDPESK-TGFASYWHTQKDNMENIDRETLKAA 298 (309)
T ss_dssp HHHHHHHHHHHHH-TCTTTEEEEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSS-SSSCTTTTSTTCSGGGBCHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCcceeccCCCCCCCCccHHHHhcCCCCEEEEecccCccc-CCCCCCCCCCcCChhhCCHHHHHHH
Confidence 3556666666665 65431111 11223678888887 5 9987653 111000 01235699999 88999999999
Q ss_pred HHHHHHHHHH
Q 013332 416 AALHASLATR 425 (445)
Q Consensus 416 ~~~~~~~i~~ 425 (445)
.+++..++.+
T Consensus 299 ~~~~~~~vy~ 308 (309)
T 3tc8_A 299 GQTVLEVIYN 308 (309)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999888754
No 87
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=27.48 E-value=38 Score=35.02 Aligned_cols=50 Identities=8% Similarity=0.197 Sum_probs=37.6
Q ss_pred ccchHHHHhhcCchhHHHHHHHHHHHHhC---CCCC--cchHHHHHHHHHHHHhCCCCe
Q 013332 34 QIPVKFLDFAKKPEIFYWMVNIRRKIHEN---PELG--FQEFETSKLIRAELDQMGIPY 87 (445)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~i---ps~s--~~E~~~a~~l~~~l~~~G~~~ 87 (445)
++.+.+.+.++..+ +.+.++.|.+. |..+ ..+.++++||.+.|++.|++.
T Consensus 6 ~l~~~l~~~i~~~~----i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~ 60 (640)
T 3kas_A 6 DLKRKLSEKLDSTD----FTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK 60 (640)
T ss_dssp HHHHHHHHHHHTCC----HHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHhCCHHH----HHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCcc
Confidence 34456777777744 78888888873 4444 456789999999999999974
No 88
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=24.43 E-value=90 Score=29.05 Aligned_cols=56 Identities=18% Similarity=0.138 Sum_probs=38.3
Q ss_pred cchHHHHHhh-cCeEEEEecCCCCCCCCCCCCCCCCC---CCCCCchHHHHHHHHHHHHHHHhhcC
Q 013332 370 TEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYF---RVNEDALPYGAALHASLATRYLLENQ 431 (445)
Q Consensus 370 ~tD~~~~~~~-ip~~~~~~G~~~~~pG~~~~~H~~~E---~v~i~~l~~~~~~~~~~i~~l~~~~~ 431 (445)
.+|-..|.+. +|++.+ +.... ....|+++- .|+.+.+....+++..++.+++..+.
T Consensus 268 ~SDH~pF~~~GIP~l~~-i~~~~-----~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~EyL~~~~ 327 (330)
T 4fai_A 268 EDDHIPFLRRNVPILHL-IPVPF-----PSVWHTPDDNASVIDYATTDNLALIIRLFALEYLLAGT 327 (330)
T ss_dssp CSTTHHHHTTTCCEEEE-CCSSC-----CTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred CCchHHHHHCCCCEEEE-ECCCC-----CCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 4676666666 998765 33222 135788774 56778889999999999988876543
Done!