Query 013335
Match_columns 445
No_of_seqs 177 out of 1348
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 08:38:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013335.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013335hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_B Tubulin beta chain; alp 100.0 4E-127 1E-131 977.8 25.4 433 1-433 1-433 (445)
2 3ryc_A Tubulin alpha chain; al 100.0 2E-126 6E-131 974.4 26.8 431 1-431 1-441 (451)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 2E-114 7E-119 894.7 27.9 427 1-428 2-441 (475)
4 2btq_B Tubulin btubb; structur 100.0 1E-112 5E-117 874.5 22.1 422 1-425 1-425 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 4E-111 2E-115 871.2 24.1 424 1-428 3-433 (473)
6 1w5f_A Cell division protein F 100.0 2.5E-44 8.5E-49 358.8 11.0 297 1-369 21-325 (353)
7 2vap_A FTSZ, cell division pro 100.0 7.1E-44 2.4E-48 356.1 10.4 294 3-370 39-338 (364)
8 2r75_1 Cell division protein F 100.0 6.2E-44 2.1E-48 354.9 8.3 297 3-372 9-312 (338)
9 1ofu_A FTSZ, cell division pro 100.0 2.8E-43 9.5E-48 348.0 12.8 296 3-369 13-313 (320)
10 2vaw_A FTSZ, cell division pro 100.0 8.7E-43 3E-47 351.2 14.3 299 2-371 12-315 (394)
11 1rq2_A Cell division protein F 100.0 2.3E-43 7.8E-48 354.2 8.7 297 2-370 12-313 (382)
12 2vxy_A FTSZ, cell division pro 100.0 1.5E-42 5.1E-47 348.2 11.5 297 2-370 12-313 (382)
13 3m89_A FTSZ/tubulin-related pr 100.0 3.4E-37 1.2E-41 308.4 10.8 275 4-323 45-353 (427)
14 3v3t_A Cell division GTPase FT 100.0 2E-30 7E-35 255.1 10.3 196 4-258 7-208 (360)
15 4dxd_A Cell division protein F 100.0 2E-30 6.7E-35 257.7 10.0 267 3-335 19-290 (396)
16 4ei7_A Plasmid replication pro 99.7 1.5E-17 5E-22 168.1 5.2 222 4-261 18-247 (389)
17 3r4v_A Putative uncharacterize 99.1 1E-10 3.5E-15 111.1 8.1 174 3-238 4-177 (315)
18 2e4h_B Tubulin alpha-ubiquitou 96.8 0.00076 2.6E-08 43.8 3.1 25 406-430 1-25 (36)
19 3bed_A PTS system, IIA compone 68.3 7.3 0.00025 32.7 5.4 34 112-146 44-77 (142)
20 1pdo_A Mannose permease; phosp 62.4 14 0.00048 30.6 6.0 36 112-147 40-75 (135)
21 3g7n_A Lipase; hydrolase fold, 57.7 5.6 0.00019 37.2 2.9 70 103-177 97-166 (258)
22 3gx1_A LIN1832 protein; APC633 55.1 16 0.00054 30.3 5.0 41 111-153 42-82 (130)
23 3ipr_A PTS system, IIA compone 54.8 8.5 0.00029 32.8 3.3 40 113-152 41-80 (150)
24 3lfh_A Manxa, phosphotransfera 54.1 10 0.00036 32.0 3.8 40 112-151 42-82 (144)
25 2nx2_A Hypothetical protein YP 52.4 49 0.0017 28.9 8.0 112 113-240 25-138 (181)
26 3uue_A LIP1, secretory lipase 49.7 11 0.00039 35.5 3.6 70 103-177 111-180 (279)
27 3mtq_A Putative phosphoenolpyr 45.9 11 0.00038 32.5 2.7 34 114-147 61-94 (159)
28 3gdw_A Sigma-54 interaction do 43.5 25 0.00085 29.4 4.4 41 111-153 42-84 (139)
29 3o0d_A YALI0A20350P, triacylgl 40.8 11 0.00036 36.1 1.9 69 103-178 127-195 (301)
30 3ct6_A PTS-dependent dihydroxy 40.7 11 0.00037 31.4 1.7 28 114-143 43-70 (131)
31 1tia_A Lipase; hydrolase(carbo 40.1 17 0.00058 34.1 3.2 53 102-158 109-161 (279)
32 2wlt_A L-asparaginase; hydrola 35.9 71 0.0024 30.8 7.0 97 108-209 65-162 (332)
33 1uwc_A Feruloyl esterase A; hy 35.4 16 0.00055 33.9 2.2 51 103-157 98-148 (261)
34 3ngm_A Extracellular lipase; s 34.3 14 0.00048 35.6 1.6 60 103-166 109-168 (319)
35 3b48_A Uncharacterized protein 34.3 11 0.00038 31.4 0.7 29 114-143 48-76 (135)
36 1o7j_A L-asparaginase; atomic 32.9 61 0.0021 31.1 5.9 97 108-209 65-162 (327)
37 2him_A L-asparaginase 1; hydro 31.5 82 0.0028 30.7 6.6 94 108-209 83-177 (358)
38 1wsa_A Asparaginase, asparagin 30.3 67 0.0023 30.9 5.7 97 108-209 63-160 (330)
39 1zq1_A Glutamyl-tRNA(Gln) amid 27.7 1E+02 0.0035 30.9 6.7 91 108-206 149-240 (438)
40 2aot_A HMT, histamine N-methyl 26.8 93 0.0032 28.6 6.0 55 117-172 37-91 (292)
41 3nxk_A Cytoplasmic L-asparagin 25.6 1E+02 0.0036 29.6 6.1 96 108-209 69-165 (334)
42 2d6f_A Glutamyl-tRNA(Gln) amid 24.8 1.3E+02 0.0045 30.1 6.8 90 108-206 148-238 (435)
43 1agx_A Glutaminase-asparaginas 24.7 67 0.0023 30.9 4.5 97 108-209 62-159 (331)
44 1nns_A L-asparaginase II; amid 24.3 1.1E+02 0.0036 29.4 5.9 95 108-209 61-156 (326)
45 1wls_A L-asparaginase; structu 21.2 88 0.003 30.0 4.6 93 108-209 55-148 (328)
46 1tib_A Lipase; hydrolase(carbo 21.0 37 0.0013 31.5 1.8 52 103-158 111-162 (269)
47 1k2d_P MBP peptide, myelin bas 20.9 23 0.00078 20.1 0.2 8 142-149 16-23 (26)
No 1
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=3.7e-127 Score=977.79 Aligned_cols=433 Identities=86% Similarity=1.388 Sum_probs=422.6
Q ss_pred CeeEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccC
Q 013335 1 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGP 80 (445)
Q Consensus 1 M~EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~ 80 (445)
|||||+||+||||||||++||+++|.||||+++|.+.++.+.+.+++++||+|+..++|+||||||||||+||+++++++
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~g~ 80 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGP 80 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTHHHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHTST
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccccccchhhccccCCCCccccceeEecCCchhhhhhhccc
Confidence 99999999999999999999999999999999999988877777889999999999999999999999999999999999
Q ss_pred CCcccCCCceeeccCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcC
Q 013335 81 YGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160 (445)
Q Consensus 81 ~~~~f~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp 160 (445)
++++|+|+++++|++|||||||+|||+.|+++.|+++|+||+++|+||.||||+|+||+|||||||+|+.|+|.|+++||
T Consensus 81 ~~~lf~p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~ 160 (445)
T 3ryc_B 81 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160 (445)
T ss_dssp TGGGSCGGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCT
T ss_pred ccceecccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCcccc
Q 013335 161 DRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCL 240 (445)
Q Consensus 161 ~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~ 240 (445)
|+.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++++++|+++
T Consensus 161 kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~sl 240 (445)
T 3ryc_B 161 DRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240 (445)
T ss_dssp TSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhcccc
Confidence 99999999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhheeeccccC
Q 013335 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320 (445)
Q Consensus 241 R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG~ 320 (445)
||||++|.|+.+|.+|||||||+||++++|+|+++..+..++++|+.+|++++|+++++|++|+|++|+|||+++++||+
T Consensus 241 Rf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~RG~ 320 (445)
T 3ryc_B 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFRGR 320 (445)
T ss_dssp HSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEEES
T ss_pred ccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeeecC
Confidence 99999999999999999999999999999999999888889999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHhhcccccceeeecCCCceeeeccCCCCCCccceeeecCChhHHHHHHHHHHHHHHhcccccccccccC
Q 013335 321 MSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400 (445)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~m~~krAflH~Y~~ 400 (445)
++++++..++.++|.|++++|++|+|+++|+++|.+||...++++++|+|+|+|.++|+++.+||++||+||||||||++
T Consensus 321 v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~~~s~~~lsNsTaI~~~~~rl~~kFd~m~~krAFvHwY~~ 400 (445)
T 3ryc_B 321 MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG 400 (445)
T ss_dssp CCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTCSEEEEEEEEEGGGHHHHHHHHHHHHHHHTTTTTTHHHHT
T ss_pred CChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCcccceeeeeecCcHHHHHHHHHHHHHHHhhhhcccchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhcHHHHHHHHHHHHHHHHHHHhhccccC
Q 013335 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATAEED 433 (445)
Q Consensus 401 ~Gmee~eF~ea~~~l~~l~~~Y~~~~~~~~~~~ 433 (445)
|||||+||.||+++|++|+++|+++.+...+++
T Consensus 401 eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~ 433 (445)
T 3ryc_B 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEQ 433 (445)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHCCTTC-
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 999999999999999999999999988765543
No 2
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=1.7e-126 Score=974.36 Aligned_cols=431 Identities=42% Similarity=0.822 Sum_probs=414.4
Q ss_pred CeeEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccc--cccccccccccCCCCCccceeEEecCCCCccccccc
Q 013335 1 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDL--QLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRS 78 (445)
Q Consensus 1 M~EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~--~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~ 78 (445)
|||||+||+||||||||++||+++|.||||+++|.+.++... ..+++++||+|++.|+|+||||||||||+||+++++
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~ 80 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeee
Confidence 999999999999999999999999999999999998776543 467899999999999999999999999999999999
Q ss_pred cCCCcccCCCceeeccCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhh
Q 013335 79 GPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158 (445)
Q Consensus 79 ~~~~~~f~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~de 158 (445)
++++++|+|+++++|++|||||||+|||+.|+++.|+++|+||+++|+||+||||+|+||+|||||||+|+.|+|.|+++
T Consensus 81 g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~e 160 (451)
T 3ryc_A 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160 (451)
T ss_dssp STTTTTSCGGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccCHHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCcc
Q 013335 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 238 (445)
Q Consensus 159 yp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 238 (445)
|||+.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++++++|+
T Consensus 161 y~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 240 (451)
T 3ryc_A 161 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
T ss_dssp TTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhccccccc
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhheeeccc
Q 013335 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFR 318 (445)
Q Consensus 239 ~~R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 318 (445)
++||||++|.||.+|.+|||||||+||++++|+|+++..+..++++++.+|++++|+++|+|++|+|++|+||||++++|
T Consensus 241 slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 320 (451)
T 3ryc_A 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320 (451)
T ss_dssp HHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhcc
Confidence 99999999999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHhhcccccceeeecCCCceeeeccCCCC--------CCccceeeecCChhHHHHHHHHHHHHHHhcc
Q 013335 319 GKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFR 390 (445)
Q Consensus 319 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~--------~~~~s~~~l~N~t~i~~~l~~l~~~~~~m~~ 390 (445)
|+++++++..++.++|.|++++|++|+|++||+++|.+||. +.++++|+|+|+|+|.++|+++.+||++||+
T Consensus 321 G~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~~ 400 (451)
T 3ryc_A 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 400 (451)
T ss_dssp ESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999997 5568999999999999999999999999999
Q ss_pred cccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHhhccc
Q 013335 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAE 431 (445)
Q Consensus 391 krAflH~Y~~~Gmee~eF~ea~~~l~~l~~~Y~~~~~~~~~ 431 (445)
||||||||++|||||+||.||+++|++|+++|+++.....|
T Consensus 401 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~ 441 (451)
T 3ryc_A 401 KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVE 441 (451)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred cceeHhhhcCCccchhhHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999776543
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=2e-114 Score=894.65 Aligned_cols=427 Identities=36% Similarity=0.725 Sum_probs=404.4
Q ss_pred CeeEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccC
Q 013335 1 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGP 80 (445)
Q Consensus 1 M~EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~ 80 (445)
|||||+||+||||||||++||+++|.||+|+++|.+.++.....+++++||+|++.++|+||+|+|||||++|+++++++
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~~~ 81 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSP 81 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCCTTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHHST
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCcccccccccceeeeecCCCceecceeEecCCcceeeeecccc
Confidence 79999999999999999999999999999999998766544445788999999999999999999999999999999999
Q ss_pred CCcccCCCceeeccC--CCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhh
Q 013335 81 YGQVFRPDNFVFGQS--GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158 (445)
Q Consensus 81 ~~~~f~~~~~~~~~~--~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~de 158 (445)
++.+|+|++++.+++ |+||||++|| ..|++..|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+|+
T Consensus 82 ~~~lf~p~~~i~g~~g~gAgnn~a~G~-~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~de 160 (475)
T 3cb2_A 82 YAKLYNPENIYLSEHGGGAGNNWASGF-SQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDR 160 (475)
T ss_dssp TTTTSCGGGEEECCTTCCCTTCHHHHH-HHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHH
T ss_pred ccccCCccceeecccccCCCCCchhhh-hhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHH
Confidence 999999999999998 7999999995 7899999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeEEEEecCCC-CCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCc
Q 013335 159 YPDRMMLTFSVFPSPK-VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 237 (445)
Q Consensus 159 yp~~~i~~~~v~P~~~-~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 237 (445)
||++.+++++|+|++. .++.++++||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++++++|
T Consensus 161 y~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~iT 240 (475)
T 3cb2_A 161 YPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240 (475)
T ss_dssp STTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHT
T ss_pred cCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccccc
Confidence 9999999999999975 688999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCccchhhhcccccccCccccccccccccccccc-ccccccCHHHHHHccccccccccccCCC---CCchhhe
Q 013335 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRSLTVPELTQQMWDAKNMMCAADPR---HGRYLTA 313 (445)
Q Consensus 238 ~~~R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~-~~~~~~t~~~l~~~~~~~~~~~~~~~~~---~~~~ls~ 313 (445)
.++||||.+|.|+.++.++||||||+||++++++|+++..+ ..++++|+.++++++|+++|+|++|+|+ +|+|||+
T Consensus 241 ~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyla~ 320 (475)
T 3cb2_A 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAI 320 (475)
T ss_dssp TTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEEEE
T ss_pred cccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchhhh
Confidence 99999999999999999999999999999999999998776 6788999999999999999999999999 9999999
Q ss_pred eeccccCCChhHHHHHHHHhhcccccceeeecCCCceeeeccCCCC---CCccceeeecCChhHHHHHHHHHHHHHHhcc
Q 013335 314 SAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT---GLKMASTFIGNSTSIQEMFRRVSEQFTAMFR 390 (445)
Q Consensus 314 ~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~---~~~~s~~~l~N~t~i~~~l~~l~~~~~~m~~ 390 (445)
++++||++.++++.+++.++|.|++++|++|+|+++|+++|.++|. +.+.++|+|+|+|+|.++|+++.+||++||+
T Consensus 321 ~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~~~~s~~~lsN~TaI~~~f~ri~~kfd~m~~ 400 (475)
T 3cb2_A 321 LNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRK 400 (475)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC-----CCEEEEEEEEGGGHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCCcceEEEEecCChHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999986 5678999999999999999999999999999
Q ss_pred cccccccccCCCCCh---hcHHHHHHHHHHHHHHHHHHHhh
Q 013335 391 RKAFLHWYTGEGMDE---MEFTEAESNMNDLVSEYQQYQDA 428 (445)
Q Consensus 391 krAflH~Y~~~Gmee---~eF~ea~~~l~~l~~~Y~~~~~~ 428 (445)
||||||||++||||| +||.||+++|++|+++|+++...
T Consensus 401 rrAflHwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~~~~~ 441 (475)
T 3cb2_A 401 REAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAATRP 441 (475)
T ss_dssp TTCSCHHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHHTTSG
T ss_pred cccceeeecccCccccchhHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999987 99999999999999999998544
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=1.3e-112 Score=874.51 Aligned_cols=422 Identities=38% Similarity=0.755 Sum_probs=379.4
Q ss_pred CeeEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCc-cccccccccccccCCCCCccceeEEecCCCCcccccccc
Q 013335 1 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDT-DLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSG 79 (445)
Q Consensus 1 M~EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~-~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~ 79 (445)
|||||+||+||||||||++||+++|.||+|+++|.+.++. +.+.+++++||+|+..++|+||+|+||+||+++++++.+
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~~ 80 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGG 80 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC-------CCCTTTEEEEETTEEEECEEEEEECC---------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCcccccccccccceeeecCCCceeeeeEEEecCcccccccccc
Confidence 9999999999999999999999999999999999887655 444678899999999999999999999999999999999
Q ss_pred CCCcccCCCceeeccCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhc
Q 013335 80 PYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159 (445)
Q Consensus 80 ~~~~~f~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~dey 159 (445)
+++.+|+|++++.|++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+|+|
T Consensus 81 ~~~~lf~p~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y 160 (426)
T 2btq_B 81 DMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAY 160 (426)
T ss_dssp ---CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTC
T ss_pred ccccccCcccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCccc
Q 013335 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 239 (445)
Q Consensus 160 p~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 239 (445)
|++.+++++|+|++..++.++++||++|++++|.+++|+++++||++|+++|.+.++ ..++|.++|++||++++++|.+
T Consensus 161 ~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-~~~~f~~~N~lia~~v~~it~~ 239 (426)
T 2btq_B 161 PKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTAS 239 (426)
T ss_dssp TTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-SCCCHHHHHHHHHHHHHHHHHH
T ss_pred CcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-CCcHHHHHHHHHHhhhcchhhh
Confidence 999999999999987889999999999999999999999999999999999998888 7899999999999999999999
Q ss_pred ccCCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhheeecccc
Q 013335 240 LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRG 319 (445)
Q Consensus 240 ~R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG 319 (445)
+||||.+|.|+.++.++|+|||++||++++++|+++..+..++++++.++++++|+++++|++|+|.+|+|||+++++||
T Consensus 240 lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~rG 319 (426)
T 2btq_B 240 LRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFRG 319 (426)
T ss_dssp HHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEEC
T ss_pred ccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHcC
Confidence 99999999999999999999999999999999999887777889999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHhhcccccceeeecC--CCceeeeccCCCCCCccceeeecCChhHHHHHHHHHHHHHHhccccccccc
Q 013335 320 KMSTKEVDEQMINVQNKNSSYFVEWIP--NNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 397 (445)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~f~~w~p--~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~m~~krAflH~ 397 (445)
++.++++.+.+.++ |++++|++|+| +++|+++|.++|.+.+.++++|+|+|+|.++|+++.+||++||+|||||||
T Consensus 320 ~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~k~~i~~~~p~~~~~s~~~lsNstaI~~~~~~~~~~f~~m~~rrAflh~ 397 (426)
T 2btq_B 320 DVKAKDVDENMATI--RKSLNYASYMPASGGLKLGYAETAPEGFASSGLALVNHTGIAAVFERLIAQFDIMFDNHAYTHW 397 (426)
T ss_dssp C----CTTTTHHHH--HTTSCBCTTSCSSCSEEEEEESCCCTTCSSBCCEEEEEGGGHHHHHHHHHHHHHHHHTTSSHHH
T ss_pred CCCHHHHHHHHHHH--hcCCCCcccCCCCCceeeeeeccCCCCCcceeEEecCChHHHHHHHHHHHHHHHHhhcccchhh
Confidence 99999999888877 67899999999 999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChhcHHHHHHHHHHHHHHHHHH
Q 013335 398 YTGEGMDEMEFTEAESNMNDLVSEYQQY 425 (445)
Q Consensus 398 Y~~~Gmee~eF~ea~~~l~~l~~~Y~~~ 425 (445)
|++|||||+||.||+++|++|+++|+++
T Consensus 398 Y~~eGmee~eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 398 YENAGVSRDMMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp HHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999986
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=4.4e-111 Score=871.19 Aligned_cols=424 Identities=36% Similarity=0.732 Sum_probs=394.6
Q ss_pred CeeEEEEecCchhhHHHHHHHHHHHHhhCCCCC-CCCCCCccccccccccccc---cCCCCCccceeEEecCCCCccccc
Q 013335 1 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPT-GKYQGDTDLQLERINVYYN---EASCGRYVPRAVLMDLEPGTMDSV 76 (445)
Q Consensus 1 M~EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~-~~~~~~~~~~~~~~~~~F~---e~~~~~~~pR~llvD~e~~~i~~i 76 (445)
|||||+||+||||||||++||+++|.||+|+++ |.+.++.+. .+++++||+ |++.++|+||+|+|||||++|+++
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~~-~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~~i 81 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAP-RGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNV 81 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCC-SSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCcc-cccccceecccccccCCceeeeeeEecCcchhhhhh
Confidence 899999999999999999999999999999999 888766554 678899999 999999999999999999999999
Q ss_pred cccCCCcccCCCceeeccCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHH
Q 013335 77 RSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156 (445)
Q Consensus 77 ~~~~~~~~f~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~ 156 (445)
+.++ +.+|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+
T Consensus 82 ~~~~-~~lf~p~~~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~ 160 (473)
T 2bto_A 82 KATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLK 160 (473)
T ss_dssp HHHS-TTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred hccc-cccccccceEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHH
Confidence 9998 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccC
Q 013335 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGV 236 (445)
Q Consensus 157 deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~ 236 (445)
|+||++.+++++|+|++..++.++++||++|++++|.+++|+++++||++|+++|.+.+++..++|.++|++||++++++
T Consensus 161 e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~~i 240 (473)
T 2bto_A 161 EKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGI 240 (473)
T ss_dssp HHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHH
T ss_pred HHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcccc
Confidence 99999999999999998788999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccc--hhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhhee
Q 013335 237 TCCLRFPGQLNSD--LRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTAS 314 (445)
Q Consensus 237 t~~~R~~~~~~~~--l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~ 314 (445)
|.++||||.+|.| +.++.++|||||++||++++++|+++.....+++.++.++++++|+++++|++|+|.+|+||+++
T Consensus 241 t~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla~~ 320 (473)
T 2bto_A 241 TASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTA 320 (473)
T ss_dssp HHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEEEE
T ss_pred hhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHHHH
Confidence 9999999999999 99999999999999999999999999877778899999999999999999999999999999999
Q ss_pred eccccCCChhHH-HHHHHHhhcccccceeeecCCCceeeeccCCCCCCccceeeecCChhHHHHHHHHHHHHHHhccccc
Q 013335 315 AMFRGKMSTKEV-DEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 393 (445)
Q Consensus 315 ~~~RG~~~~~~~-~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~m~~krA 393 (445)
+++||++.++++ .+.+.+++.+++.+| |+|+++|+++|.++|.+.++++++|+|+|+|.++|+++.+||++||+|||
T Consensus 321 ~i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~g~~~s~~~lsNsTaI~~~~~~l~~kf~~m~~rrA 398 (473)
T 2bto_A 321 VLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGISHRKSMVLLANNTEIARVLDRICHNFDKLWQRKA 398 (473)
T ss_dssp EEEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCSSCSEEEEEEEEETTHHHHHHHHHHHHHHHHTTTT
T ss_pred HhhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCcCcceeEEEecCCchHHHHHHHHHHHHHHHhhhcc
Confidence 999999999999 889999998889999 99999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCChhcHHHHHHHHHHHHHHHHHHHhh
Q 013335 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428 (445)
Q Consensus 394 flH~Y~~~Gmee~eF~ea~~~l~~l~~~Y~~~~~~ 428 (445)
|||||++|||||+||.||+++|++|+++|+++.+.
T Consensus 399 flH~Y~~eGmee~eF~EA~e~l~~l~~eY~~~~~~ 433 (473)
T 2bto_A 399 FANWYLNEGMSEEQINVLRASAQELVQSYQVAEES 433 (473)
T ss_dssp THHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred hhHHhhccCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999998654
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=2.5e-44 Score=358.76 Aligned_cols=297 Identities=15% Similarity=0.215 Sum_probs=248.5
Q ss_pred CeeEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccC
Q 013335 1 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGP 80 (445)
Q Consensus 1 M~EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~ 80 (445)
|++|++|++|||||++++++|+ |+++ | ++.+.+|++.+.++.+..
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~-----~gi~--g--------------------------v~~ia~nTD~q~L~~~~a-- 65 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIE-----IGIH--G--------------------------VEFVAVNTDLQVLEASNA-- 65 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHH-----HCCT--T--------------------------EEEEEEESCHHHHHTCCC--
T ss_pred CCEEEEECcCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEEcCCHHHHhcCCC--
Confidence 4689999999999999999997 5541 1 356888888876654432
Q ss_pred CCcccCCCceeecc-----CCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHH
Q 013335 81 YGQVFRPDNFVFGQ-----SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155 (445)
Q Consensus 81 ~~~~f~~~~~~~~~-----~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l 155 (445)
|+.+..|+ .|+||||+. |++..|+.+|.||+.+|.|| +|+|+||+|||||||+|+.|++.+
T Consensus 66 ------~~~i~iG~~~t~G~GAG~n~~~-----G~~~aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~~~ 131 (353)
T 1w5f_A 66 ------DVKIQIGENITRGLGAGGRPEI-----GEQAALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAKIA 131 (353)
T ss_dssp ------SEEEECCTTTTTTSCCTTCHHH-----HHHHHHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHH
T ss_pred ------CcEEEccCcccCCCCCCCChHH-----HHHHHHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHHHH
Confidence 33454444 599999885 57899999999999999998 599999999999999999999999
Q ss_pred HhhcCCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhcc
Q 013335 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG 235 (445)
Q Consensus 156 ~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 235 (445)
++ |+ +++++|+|.|...|..+++||+.+++++|.+++|+++++||++|+++|.+.+.+. ++|..+|++|++++++
T Consensus 132 ke-~g---~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~v~~ 206 (353)
T 1w5f_A 132 KE-MG---ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIK-DAFLKADETLHQGVKG 206 (353)
T ss_dssp HH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHH-HHHHHHHHHHHHHHHH
T ss_pred HH-hC---CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHH-HHHHHHHHHHHHHhcC
Confidence 87 65 6677777666677889999999999999999999999999999999998888886 6899999999999999
Q ss_pred CcccccCCCCCcc--chhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhhe
Q 013335 236 VTCCLRFPGQLNS--DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTA 313 (445)
Q Consensus 236 ~t~~~R~~~~~~~--~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~ 313 (445)
+|.++|+||.+|. |+.++.++|+| |+++++..+++.- ..+..+++++.++ +.+..+++..++++.+
T Consensus 207 it~~ir~pG~iNv~~D~~dv~t~L~~-~g~a~~g~g~a~g---------~~~v~ea~~~a~~--~~ll~~d~~~ak~~l~ 274 (353)
T 1w5f_A 207 ISELITKRGYIRLTSRFARIESVMKD-AGAAILGIGVGKG---------EHRAREAAKKAME--SKLIEHPVENASSIVF 274 (353)
T ss_dssp HHHHHHCCCCCCHHHHHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CTTCCSCGGGCSEEEE
T ss_pred chhhccCCcccccccCHHHHHHhccC-CCeeEEEEeecCC---------cchHHHHHHHHHh--CCCcCCChhhcceeEE
Confidence 9999999999999 99999999999 9999887766521 1457888888884 4566689999999999
Q ss_pred eeccccCCChhHHHHHHHHhhcccccceeeecCCCceeeeccCCCCCC-ccceeeec
Q 013335 314 SAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGL-KMASTFIG 369 (445)
Q Consensus 314 ~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~-~~s~~~l~ 369 (445)
++..||++.++++.+.+..++.+... |..++.+.|..++... +..+++++
T Consensus 275 ~i~~~~dl~~~ev~~a~~~I~~~~~~------~~~i~~G~~~d~~~~~~~v~vtvia 325 (353)
T 1w5f_A 275 NITAPSNIRMEEVHEAAMIIRQNSSE------DADVKFGLIFDDEVPDDEIRVIFIA 325 (353)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTSCT------TSEEEEEEEECTTSCTTEEEEEEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHhhCC------CCcEEEEEEeCCCCCCCeEEEEEEE
Confidence 99999999999999998888765431 6778888887777666 56666654
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=7.1e-44 Score=356.09 Aligned_cols=294 Identities=18% Similarity=0.248 Sum_probs=246.2
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCCC
Q 013335 3 EILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYG 82 (445)
Q Consensus 3 EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~~ 82 (445)
+|++|++|||||++++++|+ +++. | -..+.+|++.+.++.+..
T Consensus 39 ~I~vIGvGg~G~n~v~~m~~-----~gi~--g--------------------------v~fia~NTD~q~L~~~~a---- 81 (364)
T 2vap_A 39 KITVVGCGGAGNNTITRLKM-----EGIE--G--------------------------AKTVAINTDAQQLIRTKA---- 81 (364)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----HTCT--T--------------------------EEEEEEESBHHHHHTSCC----
T ss_pred eEEEEeeCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEEcCcHHHHhcCCC----
Confidence 69999999999999999997 3331 0 023667777665554331
Q ss_pred cccCCCceeec-----cCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHh
Q 013335 83 QVFRPDNFVFG-----QSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157 (445)
Q Consensus 83 ~~f~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~d 157 (445)
++.+..| ..|+||||+.| ++..|+.+|.||+.+|.||.+ +|+||+|||||||+|+.|++.+++
T Consensus 82 ----~~ki~iG~~~t~G~GAGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~lke 149 (364)
T 2vap_A 82 ----DKKILIGKKLTRGLGAGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKK 149 (364)
T ss_dssp ----SEEEECCTTTTTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH
T ss_pred ----CcEEEeccccccCCCCCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHHHH
Confidence 2334443 45999999977 789999999999999999987 999999999999999999999998
Q ss_pred hcCCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCc
Q 013335 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 237 (445)
Q Consensus 158 eyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 237 (445)
| .+++++|+|.|...+.++++||+++++++|.+++|+++++||++|+++|. .+.+ .++|..+|++|++.++++|
T Consensus 150 -~---~~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i-~~af~~~N~li~~~v~~it 223 (364)
T 2vap_A 150 -I---GALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPL-KLAFKVADEVLINAVKGLV 223 (364)
T ss_dssp -T---TCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCH-HHHHHHHHHHHHHHHHHHH
T ss_pred -h---CCcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCCh-hhhhhhHHHHHHHHHhhhh
Confidence 7 36677777776677889999999999999999999999999999999998 7777 7899999999999999999
Q ss_pred ccccCCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhheeecc
Q 013335 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMF 317 (445)
Q Consensus 238 ~~~R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 317 (445)
.++|+||.+|.|+.|+.++|+| |++|++..++++- ..+..+++++.++ ++++.+++..++++.+++..
T Consensus 224 ~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--~~ll~~d~~~ak~~l~~i~~ 291 (364)
T 2vap_A 224 ELITKDGLINVDFADVKAVMNN-GGLAMIGIGESDS---------EKRAKEAVSMALN--SPLLDVDIDGATGALIHVMG 291 (364)
T ss_dssp HHHHSCCSBCCCHHHHHHHHTT-CEEEEEEEEEECS---------TTHHHHHHHHHHT--CTTCCSCGGGCCEEEEEEEE
T ss_pred HHhhcCCceeccHHHHHHhccC-CCeeEEEEEecCC---------cchHHHHHHHHHh--CcCcCcChhhcceEEEEEEe
Confidence 9999999999999999999999 9999988876532 1347788888884 56778899999999999999
Q ss_pred ccCCChhHHHHHHHHhhcccccceeeecC-CCceeeeccCCCCCCccceeeecC
Q 013335 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIP-NNVKSTVCDIPPTGLKMASTFIGN 370 (445)
Q Consensus 318 RG~~~~~~~~~~~~~~~~~~~~~f~~w~p-~~~~~~~~~~~~~~~~~s~~~l~N 370 (445)
||++.++++.+.+..++.+.. | ..++.+.|..++...+..+++++-
T Consensus 292 ~~dl~~~ev~~a~~~I~~~~~-------~~a~ii~G~~~~~~~~~~v~VtvIat 338 (364)
T 2vap_A 292 PEDLTLEEAREVVATVSSRLD-------PNATIIWGATIDENLENTVRVLLVIT 338 (364)
T ss_dssp CTTCCHHHHHHHHHHHHHHSC-------TTCEEEEEEEECTTCSSCEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcC-------CCCCEEEEEEecCCCCCeEEEEEEEe
Confidence 999999999999888876533 3 567788887777766677766653
No 8
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=6.2e-44 Score=354.88 Aligned_cols=297 Identities=20% Similarity=0.287 Sum_probs=254.9
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCCC
Q 013335 3 EILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYG 82 (445)
Q Consensus 3 EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~~ 82 (445)
.|..|++|++|+++.+++|+ +++. | +|.|++|+|+..++.++.
T Consensus 9 ~I~viGvGg~G~n~vn~m~~-----~~~~-------------------------g---v~~ia~NTD~q~L~~~~a---- 51 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYE-----DGIE-------------------------G---VELYAINTDVQHLSTLKV---- 51 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC-------------------------S---CEEEEEESBHHHHHTCCC----
T ss_pred eEEEEeeCccHHHHHHHHHH-----hCCC-------------------------C---ceEEEEECCHHHHhcCCC----
Confidence 48899999999999999997 3220 1 678999999988775532
Q ss_pred cccCCCceeec-----cCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHh
Q 013335 83 QVFRPDNFVFG-----QSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157 (445)
Q Consensus 83 ~~f~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~d 157 (445)
++.+..| .+|+||||+.| ++..|+.+|+||+++|.||.+ +|+||+|||||||+++. ++.+++
T Consensus 52 ----~~ki~iG~~~t~g~GAGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l~~ 118 (338)
T 2r75_1 52 ----PNKIQIGEKVTRGLGAGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKTAK 118 (338)
T ss_dssp ----SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHHHH
T ss_pred ----CcEEEecCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHHHH
Confidence 3445554 48999999965 799999999999999999988 99999999999999998 777888
Q ss_pred hcCCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCc
Q 013335 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 237 (445)
Q Consensus 158 eyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 237 (445)
+|| +++++|+|.|...|.++++||+++++++|.+++|+++++||++|+++|.+.+.+. ++|..+|++|++.++++|
T Consensus 119 e~g---~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~N~~i~~~v~~it 194 (338)
T 2r75_1 119 EMG---ILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIK-DAFKEVDSVLSKAVRGIT 194 (338)
T ss_dssp HTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHH-HHHHHHHHHHHHHHHHHH
T ss_pred hcC---CCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChH-HHHHHHHHHHHHHHhhhh
Confidence 897 6788888887788999999999999999999999999999999999998888887 799999999999999999
Q ss_pred ccccCCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhheeecc
Q 013335 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMF 317 (445)
Q Consensus 238 ~~~R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 317 (445)
.++||||.+|.|+.|+.++|+|+ +++++..+++|- .......+..++.+.+|+ .+++..+++ +++++
T Consensus 195 ~~ir~pG~iNvD~~dv~t~L~~~-g~a~~g~g~a~g----~~r~~~a~~~ai~s~lle-~n~~~~a~~-------~l~~i 261 (338)
T 2r75_1 195 SIVVTPAVINVDFADVRTTLEEG-GLSIIGMGEGRG----DEKADIAVEKAVTSPLLE-GNTIEGARR-------LLVTI 261 (338)
T ss_dssp HHHHSCCSBCCCHHHHHHHHTTC-EEEEEEEEEEES----TTHHHHHHHHHHHCBSSB-SSCGGGCSE-------EEEEE
T ss_pred hhhccCCceeCCHHHhhhheeCC-ccceeeeccCCc----cchHHHHHHHHHHhhhhc-ccchhhhhe-------EEEEE
Confidence 99999999999999999999999 889998888882 112333455788888888 667777653 88899
Q ss_pred cc--CCChhHHHHHHHHhhcccccceeeecCCCceeeeccCCCCCCccceeeecCCh
Q 013335 318 RG--KMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNST 372 (445)
Q Consensus 318 RG--~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~s~~~l~N~t 372 (445)
|| ++.++++.+.+..++.+. + .|.++++++|..+|...+.++|+++|.-
T Consensus 262 ~G~~dl~~~ev~~a~~~I~~~~-----~-~~~~i~~G~~~~~~~~~~~~vtviatg~ 312 (338)
T 2r75_1 262 WTSEDIPYDIVDEVMERIHSKV-----H-PEAEIIFGAVLEPQEQDFIRVAIVATDF 312 (338)
T ss_dssp EECTTSCTTHHHHHHHHHHHHS-----C-TTCEEEEEEEECTTCCSEEEEEEEEECC
T ss_pred EcCCCCCHHHHHHHHHHHHHhc-----C-CCCcEEEEEEeCCCCCCeEEEEEEECCC
Confidence 99 889999999988887653 3 7899999999999988889999999863
No 9
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=2.8e-43 Score=348.04 Aligned_cols=296 Identities=17% Similarity=0.216 Sum_probs=245.9
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCCC
Q 013335 3 EILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYG 82 (445)
Q Consensus 3 EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~~ 82 (445)
+|++|++|||||++++++|+ |+++ | ++.+.+|++.+.++.++.
T Consensus 13 ~I~viGvGg~G~n~v~~m~~-----~gi~--g--------------------------v~~i~~ntD~q~L~~~~a---- 55 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAK-----NNVE--G--------------------------VEFICANTDAQALKNIAA---- 55 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC--S--------------------------EEEEEEESBTGGGSSCSC----
T ss_pred EEEEECcCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEEcCCHHHHhcCCC----
Confidence 69999999999999999997 5542 0 366889998887765542
Q ss_pred cccCCCceeec-----cCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHh
Q 013335 83 QVFRPDNFVFG-----QSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157 (445)
Q Consensus 83 ~~f~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~d 157 (445)
|+.+..| ..|+||||+. |++..|+.+|.||+.+|.|| +|+|+||+|||||||+++.|++ +..
T Consensus 56 ----~~~i~iG~~~t~g~GAG~n~~~-----G~~~~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~la~-~a~ 122 (320)
T 1ofu_A 56 ----RTVLQLGPGVTKGLGAGANPEV-----GRQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAE-VAK 122 (320)
T ss_dssp ----SEEEECCHHHHTTBCCCSCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHH
T ss_pred ----CcEEEccCCccCCCCCCCCHHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHH
Confidence 3455554 4699999985 46899999999999999998 5999999999999999997765 556
Q ss_pred hcCCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCc
Q 013335 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 237 (445)
Q Consensus 158 eyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 237 (445)
+|+ +++++|+|.|...|..++|||+.+++++|.+++|+++++||++|+++|.+.+.+. ++|+.+|++|++.++++|
T Consensus 123 e~g---~lt~~vv~~P~~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~n~~l~~~v~~it 198 (320)
T 1ofu_A 123 EMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGIS 198 (320)
T ss_dssp HTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHHH
T ss_pred hcC---CcEEEEEeCCccccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHH-HHHHHHHHHHHHHhcccH
Confidence 674 4566666555667889999999999999999999999999999999999888886 689999999999999999
Q ss_pred ccccCCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhheeecc
Q 013335 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMF 317 (445)
Q Consensus 238 ~~~R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 317 (445)
.++|+||.+|.|+.|+.++|+| |+++++..++++- .....+++++.+.+ .++..+++..++++.+++..
T Consensus 199 ~~ir~pG~iNvD~~dv~t~l~~-~g~~~~g~g~a~g---------~~~~~~a~~~a~~~-~ll~~~d~~~ak~~l~~i~~ 267 (320)
T 1ofu_A 199 DIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIRN-PLLEDVNLQGARGILVNITA 267 (320)
T ss_dssp HHHHSCSSSSCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHTC-GGGTTCCGGGCSEEEEEEEE
T ss_pred hhcccCCceeecHHHHHHhccC-CCeeEEEEEecCc---------ccHHHHHHHHHHhc-cccccCCccccceEEEEEEe
Confidence 9999999999999999999999 9999988776632 12357888888873 33334889999999999999
Q ss_pred ccCCChhHHHHHHHHhhcccccceeeecCCCceeeeccCCCCCCccceeeec
Q 013335 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIG 369 (445)
Q Consensus 318 RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~s~~~l~ 369 (445)
||++.++++.+.+..++.+... |..++.+.|..++...+..+++++
T Consensus 268 ~~d~~~~ev~~a~~~i~~~~~~------~~~ii~G~~~~~~~~~~v~vtvia 313 (320)
T 1ofu_A 268 GPDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMRDELHVTVVA 313 (320)
T ss_dssp CTTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECTTCCSEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCC------CCcEEEEEEcCCCCCCeEEEEEEE
Confidence 9999999999998888765332 567888888888777777777765
No 10
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=8.7e-43 Score=351.22 Aligned_cols=299 Identities=17% Similarity=0.211 Sum_probs=252.1
Q ss_pred eeEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCC
Q 013335 2 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPY 81 (445)
Q Consensus 2 ~EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~ 81 (445)
.+|++|++|||||++++++|+ |+++ | .+.+.+|++.+.++.+..
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~--g--------------------------v~fia~NTD~q~L~~~~a--- 55 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAK-----NNVE--G--------------------------VEFICANTDAQALKNIAA--- 55 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHT-----TTCC--S--------------------------EEEEEEESCTTTTSSCSS---
T ss_pred CEEEEECcCchHHHHHHHHHH-----cCCC--C--------------------------CCEEEecCCHHHHhcCCC---
Confidence 479999999999999999996 5541 1 356889999887765432
Q ss_pred CcccCCCceeec-----cCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHH
Q 013335 82 GQVFRPDNFVFG-----QSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156 (445)
Q Consensus 82 ~~~f~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~ 156 (445)
++.+..| ..|+||||+.| ++..++.+|.||+.+|.|| +|+|+||+|||||||+|+.|++.++
T Consensus 56 -----~~ki~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~~k 122 (394)
T 2vaw_A 56 -----RTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEVAK 122 (394)
T ss_dssp -----SCEEECCHHHHSSSCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHHHH
T ss_pred -----CcEEEccccccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHHHH
Confidence 3455554 46999999854 6889999999999999998 5999999999999999999999999
Q ss_pred hhcCCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccC
Q 013335 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGV 236 (445)
Q Consensus 157 deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~ 236 (445)
+|+ +++++|+|.|...|..+++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++++
T Consensus 123 -e~g---~ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~v~~i 197 (394)
T 2vaw_A 123 -EMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGI 197 (394)
T ss_dssp -HHT---CEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHH
T ss_pred -HcC---CcEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChH-HHHHHHHHHHHHHHHHH
Confidence 563 5566666665677889999999999999999999999999999999998888886 68999999999999999
Q ss_pred cccccCCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhheeec
Q 013335 237 TCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 316 (445)
Q Consensus 237 t~~~R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~ 316 (445)
|.++|+||.+|.|+.++.++|+| |+++++..+.+.- ..+..+++++.++ ++++..+++..++++.++++
T Consensus 198 t~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~rv~ea~~~A~~-spLl~~~d~~~ak~~lv~i~ 266 (394)
T 2vaw_A 198 SDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR-NPLLEDVNLQGARGILVNIT 266 (394)
T ss_dssp HHHHHSBCSSCCCHHHHHHHHTT-TCCBEEEEEEECS---------TTHHHHHHHHHHT-CGGGTTCCTTTCSEEEEEEE
T ss_pred HHHhcCCCcccccHHHHHHhccC-CCceeEEEEeccc---------cchHHHHHHHHHh-cCccCCCCccccceeEEEEE
Confidence 99999999999999999999999 7888877665421 1357899999998 67777789999999999999
Q ss_pred cccCCChhHHHHHHHHhhcccccceeeecCCCceeeeccCCCCCCccceeeecCC
Q 013335 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNS 371 (445)
Q Consensus 317 ~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~s~~~l~N~ 371 (445)
.||++..+++.+.+..++.+... +..++.+.|..++...+.++++|+-.
T Consensus 267 ~~~dl~~~ev~~a~~~I~~~~~~------~a~i~~G~~~d~~~~~~v~VtvIatG 315 (394)
T 2vaw_A 267 AGPDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMRDELHVTVVATG 315 (394)
T ss_dssp ECTTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECSSCCSCEEEEEEEEC
T ss_pred eCCCCCHHHHHHHHHHHHHhcCC------CCCEEEEeecCCCCCCeEEEEEEEcc
Confidence 99999999999998888765331 56788888888887777777777643
No 11
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=2.3e-43 Score=354.15 Aligned_cols=297 Identities=18% Similarity=0.184 Sum_probs=243.9
Q ss_pred eeEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCC
Q 013335 2 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPY 81 (445)
Q Consensus 2 ~EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~ 81 (445)
.+|++|++|||||++++++|+ |++. | .+.+.+|++.+.++.++
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~--g--------------------------v~fia~NTD~q~L~~~~---- 54 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIE-----QGLK--G--------------------------VEFIAINTDAQALLMSD---- 54 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC--S--------------------------EEEEEEESCHHHHHHCC----
T ss_pred CEEEEECcCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEecCCHHHHhcCC----
Confidence 479999999999999999997 5542 1 35688888887665443
Q ss_pred CcccCCCceeec-----cCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHH
Q 013335 82 GQVFRPDNFVFG-----QSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156 (445)
Q Consensus 82 ~~~f~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~ 156 (445)
.++.+..| ..|+||||+.| ++..|+.+|.||+.+|.|| +|+|+||+|||||||+++.|++ |+
T Consensus 55 ----a~~~i~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae-la 121 (382)
T 1rq2_A 55 ----ADVKLDVGRDSTRGLGAGADPEVG-----RKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS-IA 121 (382)
T ss_dssp ----CSEEEECCTTTC-----CCCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HH
T ss_pred ----CCcEEEecccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HH
Confidence 23344444 35899998855 6899999999999999998 5999999999999999999998 77
Q ss_pred hhcCCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccC
Q 013335 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGV 236 (445)
Q Consensus 157 deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~ 236 (445)
.+|+ +++++|+|.|...|..+++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++++
T Consensus 122 ~e~g---~ltvsVv~~Pf~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~vs~i 197 (382)
T 1rq2_A 122 RKLG---ALTVGVVTRPFSFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLM-DAFRSADEVLLNGVQGI 197 (382)
T ss_dssp HHHT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHH-HHHHHHHHHHHHHHHHH
T ss_pred HHcC---CcEEEEEecCcccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHH-HHHHHHHHHHHHHHHHH
Confidence 7787 4555555555677899999999999999999999999999999999998888886 68999999999999999
Q ss_pred cccccCCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhheeec
Q 013335 237 TCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 316 (445)
Q Consensus 237 t~~~R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~ 316 (445)
|.++||||.+|.|+.++.++|+| |+++++..+++.- ..+..++++++++ ++|+.+++..++++.+++.
T Consensus 198 t~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~i~ 265 (382)
T 1rq2_A 198 TDLITTPGLINVDFADVKGIMSG-AGTALMGIGSARG---------EGRSLKAAEIAIN--SPLLEASMEGAQGVLMSIA 265 (382)
T ss_dssp HHHHHSBCSSCCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCGGGCSEEEEEEE
T ss_pred HHHHccCCceeccHHHHHHhccC-CCeeEEEeeeccc---------ccHHHHHHHHHHh--CcCcCCChhchheEEEEEE
Confidence 99999999999999999999999 8988887765421 1346788888884 6777899999999988777
Q ss_pred cccCCChhHHHHHHHHhhcccccceeeecCCCceeeeccCCCCCCccceeeecC
Q 013335 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGN 370 (445)
Q Consensus 317 ~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~s~~~l~N 370 (445)
.++++.++++.+.+..++.+.. .|..++.+.|..++...+..+++|+-
T Consensus 266 gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~~~~v~VtvIat 313 (382)
T 1rq2_A 266 GGSDLGLFEINEAASLVQDAAH------PDANIIFGTVIDDSLGDEVRVTVIAA 313 (382)
T ss_dssp ECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECGGGTTEEEEEEEEE
T ss_pred eCCCCCHHHHHHHHHHHHHhhC------CCCCEEEEEEeCCCCCCeEEEEEEEc
Confidence 7778999999998888876533 36778888888777666777777664
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=1.5e-42 Score=348.24 Aligned_cols=297 Identities=16% Similarity=0.203 Sum_probs=247.2
Q ss_pred eeEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCC
Q 013335 2 REILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPY 81 (445)
Q Consensus 2 ~EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~ 81 (445)
.+|..|++||||+++++++|+ |++. -.+.+.+|++...++.+..
T Consensus 12 ~~I~vIGvGg~G~navn~m~~-----~gi~----------------------------gv~fia~NTD~q~L~~~~a--- 55 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIE-----NEVQ----------------------------GVEYIAVNTDAQALNLSKA--- 55 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC----------------------------SCEEEEEESBHHHHHTCCC---
T ss_pred CEEEEEeeCchHHHHHHHHHH-----hCCC----------------------------CCCEEEEeCCHHHHhcCCC---
Confidence 469999999999999999997 4432 0456889998877665532
Q ss_pred CcccCCCceeec-----cCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHH
Q 013335 82 GQVFRPDNFVFG-----QSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156 (445)
Q Consensus 82 ~~~f~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~ 156 (445)
++.+..| ..|+||||+. |++..|+.+|.||+.+|.|| +|+|+||+|||||||+|+.|++.++
T Consensus 56 -----~~ki~iG~~~t~G~GAGnn~a~-----G~e~aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~ak 122 (382)
T 2vxy_A 56 -----EVKMQIGAKLTRGLGAGANPEV-----GKKAAEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQIAK 122 (382)
T ss_dssp -----SEEEECCHHHHTTBCCTTCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred -----CcEEEecccccCCCCCCCChHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHHHH
Confidence 2344444 4699999985 57899999999999999998 5999999999999999999998887
Q ss_pred hhcCCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccC
Q 013335 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGV 236 (445)
Q Consensus 157 deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~ 236 (445)
+ |+ +++++|+|.|...|..+++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|+++++++
T Consensus 123 e-~g---~ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~vsgI 197 (382)
T 2vxy_A 123 D-LG---ALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPML-EAFREADNVLRQGVQGI 197 (382)
T ss_dssp H-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHH-HHHHHHHHHHHHHHHHH
T ss_pred H-hC---CCeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHHH
Confidence 5 85 5666676666678999999999999999999999999999999999998888886 68999999999999999
Q ss_pred cccccCCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhheeec
Q 013335 237 TCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 316 (445)
Q Consensus 237 t~~~R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~ 316 (445)
|.++||||.+|.|+.|+.++|+| |+++++..+++.- .....+++++++. ++++.+++..++|+.+++.
T Consensus 198 t~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~i~ 265 (382)
T 2vxy_A 198 SDLIATPGLINLDFADVKTIMSN-KGSALMGIGIATG---------ENRAAEAAKKAIS--SPLLEAAIDGAQGVLMNIT 265 (382)
T ss_dssp HTTTSSCCTTCCCHHHHHHHTTC-SSEEEEEEEEEES---------TTHHHHHHHHHHT--CTTSCSCGGGCSEEEEEEE
T ss_pred HHHHcCCCccccCHHHHHHhccC-CCceEEEEEeccc---------ccHHHHHHHHHHh--CcCcCCChhhcceeEEEEE
Confidence 99999999999999999999999 9999988776531 1346788888886 3567789999999988777
Q ss_pred cccCCChhHHHHHHHHhhcccccceeeecCCCceeeeccCCCCCCccceeeecC
Q 013335 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGN 370 (445)
Q Consensus 317 ~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~s~~~l~N 370 (445)
.++++..+++.+.+..++.+.. .+..++.+.|..++...+.++++|+-
T Consensus 266 gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~~~~v~VtvIat 313 (382)
T 2vxy_A 266 GGTNLSLYEVQEAADIVASASD------QDVNMIFGSVINENLKDEIVVTVIAT 313 (382)
T ss_dssp ECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECTTCSSEEEEEEEEE
T ss_pred eCCCCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCCCCCeEEEEEEEc
Confidence 7778999999999888876533 35678888888877766667766654
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=100.00 E-value=3.4e-37 Score=308.37 Aligned_cols=275 Identities=16% Similarity=0.140 Sum_probs=216.9
Q ss_pred EEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCCCc
Q 013335 4 ILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQ 83 (445)
Q Consensus 4 IItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~~~ 83 (445)
|..|.+||+|+.+.+++.+ +++ ..+++.||+|+||+++..++.++..+.
T Consensus 45 i~VIGvGg~G~n~v~~m~~-----~~~------------------------~~g~~~~~~iavNtd~~dl~~L~~~~~-- 93 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAG-----YKF------------------------SNGTTCYPTLAVNFAESDMMHLQNIIK-- 93 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTT-----CBC------------------------TTSCBSCCEEEEESSGGGGTTCSSSCG--
T ss_pred EEEEEECCcHHHHHHHHHH-----hCc------------------------ccCCcCceEEEEECCHHHHHHHhcCCC--
Confidence 6789999999999988742 110 145789999999999999998877663
Q ss_pred ccCCCce-eeccCCCCCCCCCCccccc-----hhh--HHHHHHHHHHHHh---hcCCCCceeEeecCCCCccccchHHHH
Q 013335 84 VFRPDNF-VFGQSGAGNNWAKGHYTEG-----AEL--IDSVLDVVRKEAE---NCDCLQGFQVCHSLGGGTGSGMGTLLI 152 (445)
Q Consensus 84 ~f~~~~~-~~~~~~~gnnwa~G~~~~g-----~~~--~e~~~d~ir~~~E---~cD~lqgf~i~~s~~GGtGSG~gs~ll 152 (445)
++.+ +.|+.|+||||+.|++..| ++. .|++++.||+.+| .||.+|+|+|++|+|||||||+|+.|+
T Consensus 94 ---~~~i~l~G~~GAG~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~la 170 (427)
T 3m89_A 94 ---EDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVL 170 (427)
T ss_dssp ---GGEEEC-----------CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHHH
T ss_pred ---cceEEecCCCCCCCCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHHHH
Confidence 3343 5688999999999998874 554 9999999999999 889999999999999999999999999
Q ss_pred HHHHhhcCCceeeEEEEecCCCCCcccchhhHHHHHHHHH---hh------------cCCcceeecchhhhhhhhcccC-
Q 013335 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL---VE------------NADECMVLDNEALYDICFRTLK- 216 (445)
Q Consensus 153 e~l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L---~e------------~sd~~i~~dN~~l~~~~~~~~~- 216 (445)
+.++++|+++.+++++++|++.. .++||+++++++| .+ ++|++|++||++|.+++.+...
T Consensus 171 ~~lke~~~~~~~~~vvt~P~~~e----~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~~~~ 246 (427)
T 3m89_A 171 QLIREQFFPCPVSMLISLPSGDP----DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQKGT 246 (427)
T ss_dssp HHHHTTCSSSCEEEEEEECCSCH----HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSSCS
T ss_pred HHHHHhcCCCcEEEEEEECCCCc----cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhcccc
Confidence 99999999999999999998433 3569999999997 44 9999999999998877754332
Q ss_pred -CC---CCCcc-chhHHHHHHhccCcccc-c-CCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHH
Q 013335 217 -LS---TPSFG-DLNHLISATMSGVTCCL-R-FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPEL 289 (445)
Q Consensus 217 -~~---~~~~~-~~N~~ia~~i~~~t~~~-R-~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l 289 (445)
.. +++|+ .+|++|+++|.+++... | +||.+|.|+.|+.++|.|.|+ +++.+++|..... ..++.+.
T Consensus 247 ~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G--~a~iG~a~~~~~d-----~~~~~~a 319 (427)
T 3m89_A 247 KDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGR--FLTIGKARIAKFD-----LHSLENS 319 (427)
T ss_dssp SSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCS--EEEEEEEEECSCS-----HHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCC--eEEEEEecccccc-----hhhHHHH
Confidence 12 24899 79999999999998765 4 799999999999999999998 6667787775322 1245678
Q ss_pred HHccccccccccccCCCCCchhheeeccccCCCh
Q 013335 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMST 323 (445)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~ 323 (445)
+++.+++.+++..+++..+++++++++..-+...
T Consensus 320 i~~al~~~~Ll~~~d~~~Ak~~lv~i~g~~~~~~ 353 (427)
T 3m89_A 320 IKRSLDEGFFSAEHQFETATMYGGFVLRPSNADF 353 (427)
T ss_dssp HHHHHHSSTTCSCCCGGGCCEEEEEEEEESSCGG
T ss_pred HHHHHhCCCcccccCcccccEEEEEEEeCchhhh
Confidence 8888988888889999999999998887555433
No 14
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.96 E-value=2e-30 Score=255.06 Aligned_cols=196 Identities=16% Similarity=0.248 Sum_probs=158.4
Q ss_pred EEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCCCc
Q 013335 4 ILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQ 83 (445)
Q Consensus 4 IItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~~~ 83 (445)
|..|.+|++|+.+.+++.+.- . + -..+.++++...+..++..+
T Consensus 7 I~VIGvGGaG~Nav~~m~~~~-----~---~--------------------------v~~iaiNTD~q~L~~~~~~~--- 49 (360)
T 3v3t_A 7 IVFAPIGQGGGNIVDTLLGIC-----G---D--------------------------YNALFINTSKKDLDSLKHAK--- 49 (360)
T ss_dssp EEEEEBSHHHHHHHHHHHHHC-----T---T--------------------------SEECEEESCHHHHHTCSSCS---
T ss_pred EEEEEeCCcHHHHHHHHHHcC-----C---C--------------------------ceEEEEECCHHHHhhCCCCc---
Confidence 788999999999999886411 0 0 13477888776655443211
Q ss_pred ccCCCceeeccCCCCCCCCCCccccchhhHHHHH-HHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCc
Q 013335 84 VFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL-DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162 (445)
Q Consensus 84 ~f~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~-d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~ 162 (445)
..-.+....|+|+||+.| ++..++.. |.||+.+|+|+.+|||+|+||+|||||||+|+.|++.|+++||++
T Consensus 50 ---~ki~ig~GlGAG~np~vG-----~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k 121 (360)
T 3v3t_A 50 ---HTYHIPYAEGCGKERKKA-----VGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNK 121 (360)
T ss_dssp ---CEEECC------CCHHHH-----HHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTS
T ss_pred ---cEEEcCCCCCCCCCHHHH-----HHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCC
Confidence 111223346899997765 57888888 999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEecCCCCCcccchhhHHHHHHHHHhh---cCCcc--eeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCc
Q 013335 163 MMLTFSVFPSPKVSDTVVEPYNATLSVHQLVE---NADEC--MVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 237 (445)
Q Consensus 163 ~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e---~sd~~--i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 237 (445)
++..++|+|++. +.+++|||+++++++|.+ ++|++ +++||++ .++|.++|++|+++++++|
T Consensus 122 ~v~~vtV~Pf~~--Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea------------~~ay~~lN~lIaq~vs~lt 187 (360)
T 3v3t_A 122 HFGFVGVLPKAT--EDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK------------REKESDINKEFATLFNDFM 187 (360)
T ss_dssp EEEEEEEECCTT--SCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG------------SSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCc--cchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC------------chhHHHHHHHHHHHHHHHH
Confidence 999999999855 569999999999999999 55555 9999997 4789999999999999999
Q ss_pred ccccCCCCCccchhhhccccc
Q 013335 238 CCLRFPGQLNSDLRKLAVNLI 258 (445)
Q Consensus 238 ~~~R~~~~~~~~l~~l~~~L~ 258 (445)
.++|++|.+|.|+.++.+-+.
T Consensus 188 ~~l~~~G~iNVDfaDv~tvm~ 208 (360)
T 3v3t_A 188 NMSESHAEGVVDEDEISKLLT 208 (360)
T ss_dssp GGGSCCSSCCCCHHHHHHHHH
T ss_pred HhhccCCceeeeHHHHHHHHh
Confidence 999999999999999965443
No 15
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.96 E-value=2e-30 Score=257.72 Aligned_cols=267 Identities=17% Similarity=0.254 Sum_probs=200.2
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCCC
Q 013335 3 EILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYG 82 (445)
Q Consensus 3 EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~~ 82 (445)
-|..|.+|++|+.+-++..+. ++. . ...|.++++...+..+..
T Consensus 19 ~IkVIGVGG~G~NaVn~m~~~-----~~~----------------g------------vefiaiNTD~qaL~~s~a---- 61 (396)
T 4dxd_A 19 TLKVIGVGGGGNNAVNRMIDH-----GMN----------------N------------VEFIAINTDGQALNLSKA---- 61 (396)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----CCC----------------S------------EEEEEEESCHHHHHTCCC----
T ss_pred eEEEEEECCcHHHHHHHHHHh-----CCC----------------C------------ceEEEEECCHHHHhcCCC----
Confidence 377899999999888776541 211 0 123788887765543321
Q ss_pred cccCCCceeecc-----CCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHh
Q 013335 83 QVFRPDNFVFGQ-----SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157 (445)
Q Consensus 83 ~~f~~~~~~~~~-----~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~d 157 (445)
+..+..|+ .|+||||+. |++..++.+|+||+.+|.|| +|+|+||+|||||||+++.|++ +..
T Consensus 62 ----~~ki~lG~~~t~GlGAG~np~v-----G~eaaee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIae-iak 128 (396)
T 4dxd_A 62 ----ESKIQIGEKLTRGLGAGANPEI-----GKKAAEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVAK-IAK 128 (396)
T ss_dssp ----SEEEECCHHHHTTSCCTTCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHH
T ss_pred ----ccEEEcCccccCCCCCCCChHH-----HHHHHHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHHH-HHH
Confidence 22344443 589999775 56899999999999999999 5999999999999999997765 556
Q ss_pred hcCCceeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCc
Q 013335 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 237 (445)
Q Consensus 158 eyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 237 (445)
+|+ +++++|+|.|...+..+++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|+++++++|
T Consensus 129 e~g---~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~-~af~~aN~ll~q~VsgIT 204 (396)
T 4dxd_A 129 EMG---ALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMM-EAFKEADNVLRQGVQGIS 204 (396)
T ss_dssp HTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHH-HHHHHHHHHHHHHHHHHH
T ss_pred hcC---CceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHH-HHHHHHHHHHHHHHHhhh
Confidence 786 5788888777778899999999999999999999999999999999998888876 499999999999999999
Q ss_pred ccccCCCCCccchhhhcccccccCcccccccccccccccccccccccCHHHHHHccccccccccccCCCCCchhheeecc
Q 013335 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMF 317 (445)
Q Consensus 238 ~~~R~~~~~~~~l~~l~~~L~p~p~~~~l~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 317 (445)
.++||||.+|.|+.++.++|.+. ...++....++-.. ...+..+..++. -++..+....+.+-..+..
T Consensus 205 ~~irfpG~iNvDfaDv~t~m~~~-G~A~mG~G~a~G~~---------ra~~A~~~Ai~s--PLL~~~i~gAkgvLvnItg 272 (396)
T 4dxd_A 205 DLIAVSGEVNLDFADVKTIMSNQ-GSALMGIGVSSGEN---------RAVEAAKKAISS--PLLETSIVGAQGVLMNITG 272 (396)
T ss_dssp HHHHSCCTBCCCHHHHHHHHTTC-EECEEEEEEEESTT---------HHHHHHHHHHCC--SSCSSCSTTCCEEEEEEEE
T ss_pred hhhccCCcccCCHHHHHHHhhcC-CeEEEEEEeccCCc---------hHHHHHHHHHhC--ccccCChhhhcceEEEEEc
Confidence 99999999999999999999987 45565555554321 123333443321 1223344444444444555
Q ss_pred ccCCChhHHHHHHHHhhc
Q 013335 318 RGKMSTKEVDEQMINVQN 335 (445)
Q Consensus 318 RG~~~~~~~~~~~~~~~~ 335 (445)
..++...++.+....++.
T Consensus 273 g~dl~l~Ev~~~~~~i~~ 290 (396)
T 4dxd_A 273 GESLSLFEAQEAADIVQD 290 (396)
T ss_dssp CTTCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 567777888877665543
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=99.68 E-value=1.5e-17 Score=168.08 Aligned_cols=222 Identities=16% Similarity=0.145 Sum_probs=150.4
Q ss_pred EEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCCCc
Q 013335 4 ILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQ 83 (445)
Q Consensus 4 IItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~~~ 83 (445)
|..|.+||||+.|-+.|.+ +... .+...+..++|.|+++...+..+... .
T Consensus 18 i~vIGvGgaG~~ivd~~~~-----~~~~----------------------~~~~~~~~~~iaiNTd~~~L~~~~~~---~ 67 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECAN-----KETQ----------------------IKNNKYPYRAILVNTNSQDFNKIEIK---N 67 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHT-----CCCC----------------------CTTCSCCCEEEEEECCCHHHHHSCCC---S
T ss_pred EEEEEECCchHHHHHHHHh-----cccc----------------------cccccccccEEEEECCHHHHhhccCc---c
Confidence 6789999999999988753 1100 01223446899999998776544321 1
Q ss_pred ccCCCceeecc--CCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCC
Q 013335 84 VFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPD 161 (445)
Q Consensus 84 ~f~~~~~~~~~--~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~ 161 (445)
.......++.. .|+|+||..|+ ...++..+++.+.|+..++.+| -++|++++|||||+|.++.+++.+++. .
T Consensus 68 ~~~~g~~~~~g~g~GaG~~p~~G~-~aa~e~~~~i~~~l~~~~~~~d---~vfi~ag~GGGTGtGa~pvia~~~ke~--~ 141 (389)
T 4ei7_A 68 TGNVRKIQLEGYEQGAARNPQVGE-EAFVKHETKIFEAVKQEFEDRD---FIWITCGLGGGTGTGALLKAIEMLYEH--D 141 (389)
T ss_dssp CSSEEEEECTTCCCTTCCCHHHHH-HHHHHTHHHHHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHHHHT--T
T ss_pred hhhhhhhccCCCCCCCCCChHHHH-HHHHHHHHHHHHHHHhhcCCcc---EEEEEecCCCCCccccHHHHHHHHHHc--C
Confidence 22222233322 39999987775 3455666677777777667766 459999999999999999999999884 3
Q ss_pred ceeeEEEEecCCCCCc-ccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCC--CCCCccchhHHHHHHhccCcc
Q 013335 162 RMMLTFSVFPSPKVSD-TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL--STPSFGDLNHLISATMSGVTC 238 (445)
Q Consensus 162 ~~i~~~~v~P~~~~~~-~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~--~~~~~~~~N~~ia~~i~~~t~ 238 (445)
..++.+.++|+...+. ...++++.+..|..+.+++|.+|++||+.|.++.....+. -...|+.+|.+|++.+..++.
T Consensus 142 ~~~~~vvt~Pf~~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~~~af~~an~~l~~~v~~i~~ 221 (389)
T 4ei7_A 142 YNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALHEINL 221 (389)
T ss_dssp CCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCcCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677789733222 2334444444454446789999999999999987543221 124688899999998766654
Q ss_pred cccC---CCCCccchhhhcccccccC
Q 013335 239 CLRF---PGQLNSDLRKLAVNLIPFP 261 (445)
Q Consensus 239 ~~R~---~~~~~~~l~~l~~~L~p~p 261 (445)
.... +|..|.|+.|+.+.|....
T Consensus 222 ~~~~~~~~g~in~D~aDv~~vm~~~G 247 (389)
T 4ei7_A 222 VTSSFTPFSDTHFDASEFAQVINTPG 247 (389)
T ss_dssp HTTSSEESSSCCCCHHHHHHHHTSSE
T ss_pred HHhCCCCCCeEEeeHHHHHHHhcCCC
Confidence 4333 4889999999988765433
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.11 E-value=1e-10 Score=111.12 Aligned_cols=174 Identities=20% Similarity=0.296 Sum_probs=117.5
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHhhCCCCCCCCCCCccccccccccccccCCCCCccceeEEecCCCCccccccccCCC
Q 013335 3 EILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYG 82 (445)
Q Consensus 3 EIItiq~Gq~GnqiG~~~w~~~~~E~~i~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~llvD~e~~~i~~i~~~~~~ 82 (445)
.|..+.+|++|+.|.+.+++ + + +.+|.||++.+-+...+ ...
T Consensus 4 ki~VvGvGGAG~Nii~rL~~----~--------------------------G------a~~iAiNTD~q~L~~~k--~~~ 45 (315)
T 3r4v_A 4 KVCLIFAGGTGMNVATKLVD----L--------------------------G------EAVHCFDTCDKNVVDVH--RSV 45 (315)
T ss_dssp SCEEEEEHHHHHHHHGGGGG----G--------------------------G------GGEEEEESSSTTCCGGG--GGS
T ss_pred eEEEEEEcCcchHHHHHHHH----c--------------------------C------CCEEEEECchHHhhhhh--hhc
Confidence 46678899999999876543 1 0 35678888776553221 110
Q ss_pred cccCCCceeeccCCCCCCCCCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCc
Q 013335 83 QVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162 (445)
Q Consensus 83 ~~f~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~ 162 (445)
.. .+..+..|+|.+ ...|.+..++..+.|++.++.+|- ++|+.++|||||+|.++.+++.+++. ..
T Consensus 46 ~~----~i~~gglGAGgd-----pe~g~e~a~e~~~eI~~~l~~aD~---VFVtaGLGGGTGTGaAPVvAeiake~--Ga 111 (315)
T 3r4v_A 46 NV----TLTKGTRGAGGN-----RKVILPLVRPQIPALMDTIPEADF---YIVCYSLGGGSGSVLGPLITGQLADR--KA 111 (315)
T ss_dssp EE----EECTTCCC---C-----HHHHHHHHGGGHHHHHHTSCCBSC---EEEEEESSSSSHHHHHHHHHHHHHHT--TC
T ss_pred ce----eeecccCCCCCC-----hHHHHHHHHhhHHHHHHhcCCCCE---EEEEeccCCccccchHHHHHHHHHHc--CC
Confidence 10 112333466555 667778888777888888887765 49999999999999999999999998 33
Q ss_pred eeeEEEEecCCCCCcccchhhHHHHHHHHHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCcc
Q 013335 163 MMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 238 (445)
Q Consensus 163 ~i~~~~v~P~~~~~~~~~~~yN~~lsl~~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 238 (445)
.++++++.|. ..........|++-+|..|.+.+|.+|+++ +.+. .+...++.+|+.+|..|..+..
T Consensus 112 lvVavVt~~~-E~~~~~~Nai~al~~LE~La~~~dt~Iv~d---~Len------~~~lp~~~lN~eia~rL~al~~ 177 (315)
T 3r4v_A 112 SFVSFVVGAM-ESTDNLGNDIDTMKTLEAIAVNKHLPIVVN---YVPN------TQGRSYESINDEIAEKIRKVVL 177 (315)
T ss_dssp CEEEEEEECC-SSHHHHHHHHHHHHHHHHHHHHHTSCEEEE---EEEC------CTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCC-CcchhhhchHHHHHHHHHHHhccCCcEEEe---cccc------CCCCchHHHHHHHHHHHHHHHH
Confidence 5677777763 112222223346777999999999999997 3332 2345569999999998877654
No 18
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=96.84 E-value=0.00076 Score=43.83 Aligned_cols=25 Identities=28% Similarity=0.448 Sum_probs=21.7
Q ss_pred hcHHHHHHHHHHHHHHHHHHHhhcc
Q 013335 406 MEFTEAESNMNDLVSEYQQYQDATA 430 (445)
Q Consensus 406 ~eF~ea~~~l~~l~~~Y~~~~~~~~ 430 (445)
++|+||+++|.+|+++|+++.....
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~ 25 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSV 25 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhcccc
Confidence 5799999999999999999966543
No 19
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=68.27 E-value=7.3 Score=32.74 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHhhcCCCCceeEeecCCCCcccc
Q 013335 112 LIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSG 146 (445)
Q Consensus 112 ~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG 146 (445)
-.+++.++++..+++.|. +|+.|+.++-|||-.-
T Consensus 44 ~~~~~~~~i~~~i~~~~~-~gvliLtDl~GGSp~n 77 (142)
T 3bed_A 44 GLSGTQAKLAAILKEAGN-VPTLVLADLXGGTPCN 77 (142)
T ss_dssp HHHHHHHHHHHHHHHHCS-CCEEEEESSTTSHHHH
T ss_pred CHHHHHHHHHHHHHhcCC-CCEEEEEECCCCHHHH
Confidence 346778889999999999 9999999999987433
No 20
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=62.43 E-value=14 Score=30.64 Aligned_cols=36 Identities=11% Similarity=0.149 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccc
Q 013335 112 LIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGM 147 (445)
Q Consensus 112 ~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~ 147 (445)
-.+++.++++..+++.|.=+|+.|+.++-|||-.-.
T Consensus 40 ~~~~~~~~i~~~i~~~~~~~gvliLtDl~GGSp~n~ 75 (135)
T 1pdo_A 40 NAETLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNA 75 (135)
T ss_dssp CHHHHHHHHHHHHTTSCCTTCEEEEESSTTSHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHH
Confidence 346778889999999998899999999998874333
No 21
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=57.72 E-value=5.6 Score=37.18 Aligned_cols=70 Identities=16% Similarity=0.287 Sum_probs=47.6
Q ss_pred CCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCCCCc
Q 013335 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177 (445)
Q Consensus 103 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~~~~ 177 (445)
+|++..-+.+.+.+.+.|++.+++.....=+..=||+||+ ++....-.|+..+|...+..+ .+-.|..++
T Consensus 97 ~GF~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~~~~~~v~~~-tFg~PrvGn 166 (258)
T 3g7n_A 97 RGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGGA----LTSIAHVALAQNFPDKSLVSN-ALNAFPIGN 166 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHH----HHHHHHHHHHHHCTTSCEEEE-EESCCCCBC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHHH----HHHHHHHHHHHhCCCCceeEE-EecCCCCCC
Confidence 4555555567778888888888887666666677899764 567777778888887655433 344444554
No 22
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=55.05 E-value=16 Score=30.26 Aligned_cols=41 Identities=10% Similarity=0.318 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHH
Q 013335 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLIS 153 (445)
Q Consensus 111 ~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle 153 (445)
+-.+++.++++..+++.|.-+|..|+.++ ||-+-++..+.+
T Consensus 42 ~~~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~~ 82 (130)
T 3gx1_A 42 VEVKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILTE 82 (130)
T ss_dssp SCHHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 34578889999999999999999999999 665555554443
No 23
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=54.78 E-value=8.5 Score=32.76 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHH
Q 013335 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152 (445)
Q Consensus 113 ~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~ll 152 (445)
.+.+.++++..+++.|.=+|+.|+.++-|||-.-.+..++
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~~ 80 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVI 80 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHH
Confidence 4667788888999989889999999999998544444333
No 24
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=54.10 E-value=10 Score=31.98 Aligned_cols=40 Identities=18% Similarity=0.106 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHhhc-CCCCceeEeecCCCCccccchHHH
Q 013335 112 LIDSVLDVVRKEAENC-DCLQGFQVCHSLGGGTGSGMGTLL 151 (445)
Q Consensus 112 ~~e~~~d~ir~~~E~c-D~lqgf~i~~s~~GGtGSG~gs~l 151 (445)
-.+++.++++..+++. |.=+|+.|+.++-|||-.-.+..+
T Consensus 42 ~~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l 82 (144)
T 3lfh_A 42 NIEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSM 82 (144)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHH
Confidence 3467778888888888 888999999999999865555444
No 25
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=52.44 E-value=49 Score=28.92 Aligned_cols=112 Identities=16% Similarity=0.140 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhh-cCCCCce-eEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCCCCcccchhhHHHHHHH
Q 013335 113 IDSVLDVVRKEAEN-CDCLQGF-QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVH 190 (445)
Q Consensus 113 ~e~~~d~ir~~~E~-cD~lqgf-~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~ 190 (445)
...+...|++.+++ .+ +|+ -++.+...|+- -++..++-.|+.+||...+ ..|+|+...+..- .+-|. ....
T Consensus 25 ~~~ik~~L~~~l~~l~~--~G~~~~isgga~G~D-~~aae~vl~lk~~y~~i~L--~~v~Pf~~~~~~w-~~~~~-~~y~ 97 (181)
T 2nx2_A 25 LYYIKKAIKNRLIAFLD--EGLEWILISGQLGVE-LWAAEAAYDLQEEYPDLKV--AVITPFYEQEKNW-KEPNK-EQYE 97 (181)
T ss_dssp HHHHHHHHHHHHHHHHT--TTCCEEEECCCTTHH-HHHHHHHHTTTTTCTTCEE--EEEESSBCTTTTS-CHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCCcEEEECCCccHH-HHHHHHHHHhccccCCceE--EEEecccchhhCC-CHHHH-HHHH
Confidence 34455555555554 22 253 45555555553 3344445556778985444 5678875555433 23233 4677
Q ss_pred HHhhcCCcceeecchhhhhhhhcccCCCCCCccchhHHHHHHhccCcccc
Q 013335 191 QLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCL 240 (445)
Q Consensus 191 ~L~e~sd~~i~~dN~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~ 240 (445)
.+.+.||-+..+...... ....|..-|+.+...-+.+.+-+
T Consensus 98 ~ll~~aD~v~~l~~~~y~---------~~~~~~~rn~~mvd~sD~liavy 138 (181)
T 2nx2_A 98 AVLAQADYEASLTHRPYE---------SPLQFKQKNQFFIDKSDGLLLLY 138 (181)
T ss_dssp HHHHHCSEEEESSSSBCC---------CHHHHHHHHHHHHHHSSEEEEEC
T ss_pred HHHHhCCeEEecccCCCC---------CHHHHHHHHHHHHHHCCEEEEEE
Confidence 888889988877432110 01124566777777666665544
No 26
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=49.69 E-value=11 Score=35.46 Aligned_cols=70 Identities=23% Similarity=0.336 Sum_probs=45.4
Q ss_pred CCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCCCCc
Q 013335 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177 (445)
Q Consensus 103 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~~~~ 177 (445)
+|++..-..+.+.+.+.|++.+++.....=+..=||+||+ ++..+.-.|+..+|...+-. -.+-.+..++
T Consensus 111 ~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGa----lA~l~a~~l~~~~~~~~~~~-~tfg~PrvGn 180 (279)
T 3uue_A 111 HGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAA----MGLLCAMDIELRMDGGLYKT-YLFGLPRLGN 180 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHH----HHHHHHHHHHHHSTTCCSEE-EEESCCCCBC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHHH----HHHHHHHHHHHhCCCCceEE-EEecCCCcCC
Confidence 4555444566777888888888887666666677899765 56766777777777543333 3333445554
No 27
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=45.92 E-value=11 Score=32.46 Aligned_cols=34 Identities=9% Similarity=0.010 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhhcCCCCceeEeecCCCCccccc
Q 013335 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGM 147 (445)
Q Consensus 114 e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~ 147 (445)
+++.++++..+++.|.-+|+.|+.++-|||-+-.
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGSP~n~ 94 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGSVNNE 94 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHH
Confidence 4677889999999998899999999999985433
No 28
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=43.52 E-value=25 Score=29.45 Aligned_cols=41 Identities=12% Similarity=0.287 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHHHHhh--cCCCCceeEeecCCCCccccchHHHHH
Q 013335 111 ELIDSVLDVVRKEAEN--CDCLQGFQVCHSLGGGTGSGMGTLLIS 153 (445)
Q Consensus 111 ~~~e~~~d~ir~~~E~--cD~lqgf~i~~s~~GGtGSG~gs~lle 153 (445)
+-.+++.++++..+++ .|.-+|..|+.++ ||-+-++..+.+
T Consensus 42 ~~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l~~ 84 (139)
T 3gdw_A 42 MEVQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLFE 84 (139)
T ss_dssp SCHHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 3457888999999998 7788999999999 665555555443
No 29
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=40.76 E-value=11 Score=36.11 Aligned_cols=69 Identities=19% Similarity=0.199 Sum_probs=43.3
Q ss_pred CCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCCCCcc
Q 013335 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178 (445)
Q Consensus 103 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~~~~~ 178 (445)
+|++..-+.+.+.+.+.|++.+++.....=...=||+||+ ++..++-.|+...++..+++| -.|..++.
T Consensus 127 ~GF~~~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~~~~~~~~tf---g~PrvGn~ 195 (301)
T 3o0d_A 127 NGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGA----AALLFGINLKVNGHDPLVVTL---GQPIVGNA 195 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHH----HHHHHHHHHHHTTCCCEEEEE---SCCCCBBH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeccChHHH----HHHHHHHHHHhcCCCceEEee---CCCCccCH
Confidence 4555544566777888888888877655555667898764 566666667776555444433 34445553
No 30
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=40.68 E-value=11 Score=31.40 Aligned_cols=28 Identities=18% Similarity=0.309 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhhcCCCCceeEeecCCCCc
Q 013335 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGT 143 (445)
Q Consensus 114 e~~~d~ir~~~E~cD~lqgf~i~~s~~GGt 143 (445)
+...++|+..+++.|. +|+.|+.++ ||+
T Consensus 43 ~~~~~~i~~ai~~~~~-dgVlvltDL-Ggs 70 (131)
T 3ct6_A 43 GTSFDRVMNAIEENEA-DNLLTFFDL-GSA 70 (131)
T ss_dssp SCCHHHHHHHHHHSSC-SEEEEEESS-GGG
T ss_pred HHHHHHHHHHHHhCCC-CCEEEEEeC-CCC
Confidence 3445677788888884 899999999 665
No 31
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=40.11 E-value=17 Score=34.08 Aligned_cols=53 Identities=19% Similarity=0.281 Sum_probs=37.2
Q ss_pred CCCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhh
Q 013335 102 AKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158 (445)
Q Consensus 102 a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~de 158 (445)
-+|++..-+.+.+++.+.|++..++.....=+.+=||+||+. +..++-.++..
T Consensus 109 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGal----A~l~a~~l~~~ 161 (279)
T 1tia_A 109 ELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAV----ATLAATDLRGK 161 (279)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHHH----HHHHHHHHHhc
Confidence 467665556677788888888888776667677888997654 55555556543
No 32
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=35.92 E-value=71 Score=30.75 Aligned_cols=97 Identities=10% Similarity=0.163 Sum_probs=59.3
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCC-CCcccchhhHHH
Q 013335 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNAT 186 (445)
Q Consensus 108 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~ 186 (445)
...+.+..+.+.|+..+++ +..+||.|+|..+ | --.++..++.+-+ .+|-.+++=+-.|... .+|.....++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--T-meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (332)
T 2wlt_A 65 MNEEIWFKLAQRAQELLDD-SRIQGVVITHGTD--T-LEESAYFLNLVLH-STKPVVLVGAMRNASSLSADGALNLYEAV 139 (332)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCSS--S-HHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCch--h-HHHHHHHHHHHhC-CCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 4567778888888887754 4688999999776 5 2456666666544 5565566667788654 345566666666
Q ss_pred HHHHHHhhcCCcceeecchhhhh
Q 013335 187 LSVHQLVENADECMVLDNEALYD 209 (445)
Q Consensus 187 lsl~~L~e~sd~~i~~dN~~l~~ 209 (445)
..-.+-...--.|+++=|+.++.
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~ 162 (332)
T 2wlt_A 140 SVAVNEKSANKGVLVVMDDTIFS 162 (332)
T ss_dssp HHHHCGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEee
Confidence 44322111112455555666654
No 33
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=35.40 E-value=16 Score=33.89 Aligned_cols=51 Identities=24% Similarity=0.282 Sum_probs=34.9
Q ss_pred CCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHh
Q 013335 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157 (445)
Q Consensus 103 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~d 157 (445)
+|++..-+.+.+.+.+.|++..++.....=+..=||+||+ ++..+.-.|+.
T Consensus 98 ~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~ 148 (261)
T 1uwc_A 98 GGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGAS----MAALTAAQLSA 148 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHH----HHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHCCCceEEEEecCHHHH----HHHHHHHHHhc
Confidence 4555444556677888888888877666667778899765 55666666664
No 34
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae}
Probab=34.34 E-value=14 Score=35.60 Aligned_cols=60 Identities=23% Similarity=0.228 Sum_probs=38.4
Q ss_pred CCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeE
Q 013335 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLT 166 (445)
Q Consensus 103 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~ 166 (445)
.|++..-..+.+.+.+.|++.+++.....=+..=||+||+ ++..+.-.|+...+...+++
T Consensus 109 ~GF~~a~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGA----lA~L~a~~l~~~~~~v~~~T 168 (319)
T 3ngm_A 109 SGFQNAWNEISAAATAAVAKARKANPSFKVVSVGHSLGGA----VATLAGANLRIGGTPLDIYT 168 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHH----HHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHH----HHHHHHHHHHhcCCCceeee
Confidence 4555555566777788888888877666666777899765 45655556665543333333
No 35
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=34.31 E-value=11 Score=31.41 Aligned_cols=29 Identities=17% Similarity=0.180 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHhhcCCCCceeEeecCCCCc
Q 013335 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGT 143 (445)
Q Consensus 114 e~~~d~ir~~~E~cD~lqgf~i~~s~~GGt 143 (445)
+...++|+..+++.|.=+|+.|+.++ ||+
T Consensus 48 ~~~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 48 GSDPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp SCCHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 34456788888888877899999999 665
No 36
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=32.89 E-value=61 Score=31.13 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=59.3
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCC-CCcccchhhHHH
Q 013335 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNAT 186 (445)
Q Consensus 108 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~ 186 (445)
...+.+..+.+.|+..+++ +..+||.|+|..+ | --.++..+..+-+ .+|-.+++=+-.|... .+|.....++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--T-meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (327)
T 1o7j_A 65 MTGDVVLKLSQRVNELLAR-DDVDGVVITHGTD--T-VEESAYFLHLTVK-SDKPVVFVAAMRPATAISADGPMNLLEAV 139 (327)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCST--T-HHHHHHHHHHHCC-CCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCch--h-HHHHHHHHHHHhC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 5567778888888887754 5688999999776 4 2456666666544 5565566667788654 345556556665
Q ss_pred HHHHHHhhcCCcceeecchhhhh
Q 013335 187 LSVHQLVENADECMVLDNEALYD 209 (445)
Q Consensus 187 lsl~~L~e~sd~~i~~dN~~l~~ 209 (445)
..-.+-...--.|+++=|+.++.
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~ 162 (327)
T 1o7j_A 140 RVAGDKQSRGRGVMVVINDRIGS 162 (327)
T ss_dssp HHHHCGGGTTSCCEEEETTEEEE
T ss_pred HHHhCcCCCCCceEEEECCEEee
Confidence 43322111112455555666654
No 37
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=31.47 E-value=82 Score=30.68 Aligned_cols=94 Identities=19% Similarity=0.214 Sum_probs=60.5
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCC-CCcccchhhHHH
Q 013335 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNAT 186 (445)
Q Consensus 108 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~ 186 (445)
...+.+..+.+.|+..++ ..+||.|+|..+ | --.++..++.+-+..+|-.+++=+-.|... .+|.....++++
T Consensus 83 mt~~~w~~la~~I~~~~~---~~dG~VItHGTD--T-meeTA~~Ls~~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 156 (358)
T 2him_A 83 MTPEDWQHIAEDIKAHYD---DYDGFVILHGTD--T-MAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNAL 156 (358)
T ss_dssp CCHHHHHHHHHHHHHHGG---GCSEEEEECCST--T-HHHHHHHHHHHEETCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh---cCCeEEEecCch--H-HHHHHHHHHHHHhcCCCCEEEeCCCCCCcCCCcchHHHHHHHH
Confidence 556777788888888776 377999999776 4 245666676665555666667777788754 445566666666
Q ss_pred HHHHHHhhcCCcceeecchhhhh
Q 013335 187 LSVHQLVENADECMVLDNEALYD 209 (445)
Q Consensus 187 lsl~~L~e~sd~~i~~dN~~l~~ 209 (445)
..-.+ .+ +-.|+++=|+.++.
T Consensus 157 ~~A~~-~~-~~GV~V~fn~~i~~ 177 (358)
T 2him_A 157 YVAAN-YP-INEVTLFFNNRLYR 177 (358)
T ss_dssp HHHHH-SC-CSSEEEEETTEEEE
T ss_pred HHHhC-CC-CCCeEEEECCEEee
Confidence 54433 22 23555555666654
No 38
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=30.34 E-value=67 Score=30.90 Aligned_cols=97 Identities=10% Similarity=0.100 Sum_probs=58.9
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCC-CCcccchhhHHH
Q 013335 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNAT 186 (445)
Q Consensus 108 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~ 186 (445)
...+.+..+.+.|+..+++ +..+||.|+|..+ | --.++..++.+-+ .+|-.+++=+-.|... .+|.....++++
T Consensus 63 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--T-meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 137 (330)
T 1wsa_A 63 MTGKVWLKLAKRVNELLAQ-KETEAVIITHGTD--T-MEETAFFLNLTVK-SQKPVVLVGAMRPGSSMSADGPMNLYNAV 137 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHS-TTCCCEEEECCSS--S-HHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEEcCcc--h-HHHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 5567788888888887764 5688999999776 5 2456666665544 5565566666788654 345555555555
Q ss_pred HHHHHHhhcCCcceeecchhhhh
Q 013335 187 LSVHQLVENADECMVLDNEALYD 209 (445)
Q Consensus 187 lsl~~L~e~sd~~i~~dN~~l~~ 209 (445)
..-.+-...--.|+++=|+.++.
T Consensus 138 ~~A~~~~~~~~GV~V~fn~~i~~ 160 (330)
T 1wsa_A 138 NVAINKASTNKGVVIVMNDEIHA 160 (330)
T ss_dssp HHHTCGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEee
Confidence 43322111112455555666654
No 39
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=27.73 E-value=1e+02 Score=30.91 Aligned_cols=91 Identities=19% Similarity=0.108 Sum_probs=57.6
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCC-CCcccchhhHHH
Q 013335 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNAT 186 (445)
Q Consensus 108 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~ 186 (445)
...+.|..+.+.|+..++ +..+||.|+|..+ | --.++..+..+-+..+|-.+++=+-.|... .+|.....++++
T Consensus 149 mtp~~w~~La~~I~~~~~--~~~DG~VItHGTD--T-MeeTA~~Lsl~l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av 223 (438)
T 1zq1_A 149 MKPKHWVKIAHEVAKALN--SGDYGVVVAHGTD--T-MGYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSV 223 (438)
T ss_dssp CCHHHHHHHHHHHHHHHH--TTCSEEEEECCSS--S-HHHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhc--cCCCeEEEecCch--h-HHHHHHHHHHHHhCCCCCEEEeCCCCCCCCCCcchHHHHHHHH
Confidence 455667778888888776 3688999999776 5 245666676665455666677777788754 345556555655
Q ss_pred HHHHHHhhcCCcceeecchh
Q 013335 187 LSVHQLVENADECMVLDNEA 206 (445)
Q Consensus 187 lsl~~L~e~sd~~i~~dN~~ 206 (445)
..-. ...+ .|+++=|+.
T Consensus 224 ~~A~--~~~~-GV~Vvfn~~ 240 (438)
T 1zq1_A 224 RMAT--SEVA-EVMVVMHGE 240 (438)
T ss_dssp HHHT--SSBC-SEEEEEESS
T ss_pred HHHc--CCCC-CeEEEECCc
Confidence 4432 2334 444444444
No 40
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=26.81 E-value=93 Score=28.58 Aligned_cols=55 Identities=22% Similarity=0.254 Sum_probs=33.3
Q ss_pred HHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecC
Q 013335 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172 (445)
Q Consensus 117 ~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~ 172 (445)
.+.+...++.......=.-+-++|.||| .++..++..+...+|...+...+|-|+
T Consensus 37 ~~~l~~~l~~~~~~~~~~~VLDiG~GtG-~~~~~~l~~l~~~~~~~~v~~~~vD~S 91 (292)
T 2aot_A 37 DKKLPGIIGRIGDTKSEIKILSIGGGAG-EIDLQILSKVQAQYPGVCINNEVVEPS 91 (292)
T ss_dssp HHTHHHHSSSTTTTCSEEEEEEETCTTS-HHHHHHHHHHHHHSTTCEEEEEEECSC
T ss_pred HHhchhHHhhccCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhCCCceeeEEEEeCC
Confidence 3345544444432222245778888886 466667888888887765444667665
No 41
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=25.58 E-value=1e+02 Score=29.62 Aligned_cols=96 Identities=17% Similarity=0.137 Sum_probs=56.3
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCC-CCcccchhhHHH
Q 013335 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNAT 186 (445)
Q Consensus 108 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~ 186 (445)
...+.+..+.+.|+..++ +..+||.|+|..+ |= -.++.+++.+- ..+|-.+++=+..|... .+|.....++++
T Consensus 69 m~~~~~~~la~~i~~~~~--~~~dGvVItHGTD--Tm-~~TA~~L~~~l-~~~kPVVlTGa~rp~~~~~sDg~~NL~~Av 142 (334)
T 3nxk_A 69 MCDEIWLRLAKKIAKLFA--EGIDGVVITHGTD--TM-EETAYFLNLTI-KSDKPVVLVGAMRPSTAISADGPKNLYNAV 142 (334)
T ss_dssp CCHHHHHHHHHHHHHHHH--TTCCEEEEECCST--TH-HHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhh--cCCCeEEEECCCc--hH-HHHHHHHHHHc-CCCCCEEEECCCCCCCCCCchHHHHHHHHH
Confidence 445667777777777765 6789999999765 42 34555555543 45666666667788654 344455555555
Q ss_pred HHHHHHhhcCCcceeecchhhhh
Q 013335 187 LSVHQLVENADECMVLDNEALYD 209 (445)
Q Consensus 187 lsl~~L~e~sd~~i~~dN~~l~~ 209 (445)
....+-....-.|+++=|+.++.
T Consensus 143 ~~A~~~~a~~~GV~v~f~~~i~~ 165 (334)
T 3nxk_A 143 ALVVNKEAKNKGVMVAINDKILS 165 (334)
T ss_dssp HHHHSGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEEe
Confidence 44332111122455555666655
No 42
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=24.79 E-value=1.3e+02 Score=30.08 Aligned_cols=90 Identities=20% Similarity=0.115 Sum_probs=56.8
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCC-CCcccchhhHHH
Q 013335 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNAT 186 (445)
Q Consensus 108 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~ 186 (445)
...+.|..+.+.|+..++ +..+||.|+|..+ | --.++..+..+- ..+|-.+++=+-.|... .+|.....++++
T Consensus 148 mtp~~w~~La~~I~~~~~--~~~DG~VItHGTD--T-MeeTA~~Lsl~l-~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av 221 (435)
T 2d6f_A 148 MKPEYWVETARAVYGEIK--DGADGVVVAHGTD--T-MHYTSAALSFML-RTPVPVVFTGAQRSSDRPSSDASLNIQCSV 221 (435)
T ss_dssp CCHHHHHHHHHHHHHHHH--TTCSEEEEECCTT--T-HHHHHHHHHHHE-ECSSCEEEECCSSCTTSTTCTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhc--cCCCeEEEEcCcc--h-HHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 445667778888888776 3688999999776 5 245666666655 55666667777788754 345566666666
Q ss_pred HHHHHHhhcCCcceeecchh
Q 013335 187 LSVHQLVENADECMVLDNEA 206 (445)
Q Consensus 187 lsl~~L~e~sd~~i~~dN~~ 206 (445)
..-.+ ..+ .|+++=|+.
T Consensus 222 ~~A~~--~~~-GV~Vvfn~~ 238 (435)
T 2d6f_A 222 RAATS--EIA-EVTVCMHAT 238 (435)
T ss_dssp HHHHS--SCC-SEEEEEESS
T ss_pred HHHcC--CCC-CeEEEECCc
Confidence 44332 334 444444454
No 43
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=24.71 E-value=67 Score=30.93 Aligned_cols=97 Identities=16% Similarity=0.197 Sum_probs=58.0
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCC-CCcccchhhHHH
Q 013335 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNAT 186 (445)
Q Consensus 108 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~ 186 (445)
...+.+..+.+.|+..+++ +..+||.|+|..+ | --.++..++.+-+ .+|-.+++=+-.|... .+|.....++++
T Consensus 62 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--T-meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 136 (331)
T 1agx_A 62 ITDKELLSLARQVNDLVKK-PSVNGVVITHGTD--T-MEETAFFLNLVVH-TDKPIVLVGSMRPSTALSADGPLNLYSAV 136 (331)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCGG--G-HHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCcc--h-HHHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCchhHHHHHHHH
Confidence 5567788888888887754 5688999999765 4 2456666665544 5565566667788654 345555555555
Q ss_pred HHHHHHhhcCCcceeecchhhhh
Q 013335 187 LSVHQLVENADECMVLDNEALYD 209 (445)
Q Consensus 187 lsl~~L~e~sd~~i~~dN~~l~~ 209 (445)
..-.+-...--.|+++=|+.++.
T Consensus 137 ~~A~~~~~~~~GV~V~fn~~i~~ 159 (331)
T 1agx_A 137 ALASSNEAKNKGVMVLMNDSIFA 159 (331)
T ss_dssp HHHTCTTCTTSCEEEEETTEEEE
T ss_pred HHHhCcCCCCCeEEEEECCEEee
Confidence 43321110112455555666655
No 44
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=24.34 E-value=1.1e+02 Score=29.42 Aligned_cols=95 Identities=14% Similarity=0.240 Sum_probs=58.3
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCC-CCcccchhhHHH
Q 013335 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNAT 186 (445)
Q Consensus 108 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~ 186 (445)
...+.+..+.+.|+..+++. +||.|+|..+ | --.++..++.+- ..+|-.+++=+-.|... .+|.....++++
T Consensus 61 mt~~~w~~la~~I~~~~~~~---dG~VItHGTD--T-meeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 133 (326)
T 1nns_A 61 MNDNVWLTLAKKINTDCDKT---DGFVITHGTD--T-MEETAYFLDLTV-KCDKPVVMVGAMRPSTSMSADGPFNLYNAV 133 (326)
T ss_dssp CCHHHHHHHHHHHHHHGGGC---SEEEEECCSS--S-HHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhcC---CcEEEEcCch--h-HHHHHHHHHHhc-CCCCCEEEeCCCCCCcCCCCchHHHHHHHH
Confidence 55678888888888887654 8999999776 5 245666666554 45665666667788754 345556566665
Q ss_pred HHHHHHhhcCCcceeecchhhhh
Q 013335 187 LSVHQLVENADECMVLDNEALYD 209 (445)
Q Consensus 187 lsl~~L~e~sd~~i~~dN~~l~~ 209 (445)
..-.+-...--.|+++=|+.++.
T Consensus 134 ~~A~~~~~~~~GV~v~fn~~i~~ 156 (326)
T 1nns_A 134 VTAADKASANRGVLVVMNDTVLD 156 (326)
T ss_dssp HHHHCGGGTTSCSEEEETTEEEE
T ss_pred HHHcCcccCCCceEEEECCEEee
Confidence 44322111112455555665654
No 45
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=21.21 E-value=88 Score=30.04 Aligned_cols=93 Identities=17% Similarity=0.093 Sum_probs=59.4
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhhcCCceeeEEEEecCCC-CCcccchhhHHH
Q 013335 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNAT 186 (445)
Q Consensus 108 ~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~ 186 (445)
...+.+..+.+.|+..++ ..+||.|+|+.+ | --.++..++.+-...+|-.+++=+-.|... .+|.....++++
T Consensus 55 mt~~~w~~la~~I~~~~~---~~dG~VItHGTD--T-meeTA~~Ls~ll~~~~kPVVlTGAqrP~~~~~sDg~~NL~~Av 128 (328)
T 1wls_A 55 IQPSDWERLAKEIEKEVW---EYDGIVITHGTD--T-MAYSASMLSFMLRNPPIPIVLTGSMLPITEKNSDAPFNLRTAL 128 (328)
T ss_dssp CCHHHHHHHHHHHHHHTT---TCSEEEEECCGG--G-HHHHHHHHHHHEESCSSEEEEECCSSCTTSSSCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhc---cCCeEEEEcCCc--h-HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCCCchHHHHHHHH
Confidence 556778888888888775 478999999765 4 245666777443445666666667788754 345555555555
Q ss_pred HHHHHHhhcCCcceeecchhhhh
Q 013335 187 LSVHQLVENADECMVLDNEALYD 209 (445)
Q Consensus 187 lsl~~L~e~sd~~i~~dN~~l~~ 209 (445)
..-.+ ..+ .|+++=|+.++.
T Consensus 129 ~~A~~--~~~-GV~V~fn~~i~~ 148 (328)
T 1wls_A 129 EFVKL--GIR-GIYIAFNGKVML 148 (328)
T ss_dssp HHHTT--TCC-EEEEEETTEEEE
T ss_pred HHHhC--CCC-CeEEEECCEEee
Confidence 43322 223 566666666764
No 46
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=21.01 E-value=37 Score=31.49 Aligned_cols=52 Identities=19% Similarity=0.256 Sum_probs=35.3
Q ss_pred CCccccchhhHHHHHHHHHHHHhhcCCCCceeEeecCCCCccccchHHHHHHHHhh
Q 013335 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158 (445)
Q Consensus 103 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqgf~i~~s~~GGtGSG~gs~lle~l~de 158 (445)
+|++..-+.+.+++.+.+++..++.....=+.+=||+||+ ++..++..++..
T Consensus 111 ~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGa----lA~l~a~~l~~~ 162 (269)
T 1tib_A 111 DGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGA----LATVAGADLRGN 162 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHH----HHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCChHHH----HHHHHHHHHHhc
Confidence 4555444566677777888887776666667888899754 566666666554
No 47
>1k2d_P MBP peptide, myelin basic protein peptide with 8 residue linke; MHC class II, I-AU, H-2U, autoimmune disease; HET: NDG NAG; 2.20A {Mus musculus}
Probab=20.86 E-value=23 Score=20.08 Aligned_cols=8 Identities=75% Similarity=1.298 Sum_probs=4.9
Q ss_pred CccccchH
Q 013335 142 GTGSGMGT 149 (445)
Q Consensus 142 GtGSG~gs 149 (445)
|+|||.|+
T Consensus 16 g~gsgsgs 23 (26)
T 1k2d_P 16 GTGSGSGS 23 (26)
T ss_pred cCCCCcCc
Confidence 56666665
Done!