Query 013336
Match_columns 445
No_of_seqs 157 out of 1388
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 02:49:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013336.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013336hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01301 GPH_sucrose GPH fami 100.0 6.6E-56 1.4E-60 457.1 22.1 372 4-434 86-476 (477)
2 KOG0637 Sucrose transporter an 100.0 5E-51 1.1E-55 403.3 10.7 358 1-427 111-494 (498)
3 KOG0569 Permease of the major 99.9 1.8E-24 3.9E-29 221.8 10.2 337 40-438 119-463 (485)
4 PF13347 MFS_2: MFS/sugar tran 99.8 7.3E-21 1.6E-25 196.0 12.9 303 10-406 51-388 (428)
5 TIGR00792 gph sugar (Glycoside 99.8 2.2E-19 4.8E-24 184.7 16.4 334 7-434 46-425 (437)
6 TIGR00887 2A0109 phosphate:H+ 99.8 4.1E-18 9E-23 179.2 15.2 352 44-438 122-497 (502)
7 PRK10429 melibiose:sodium symp 99.8 9.8E-18 2.1E-22 175.1 16.8 311 7-405 53-396 (473)
8 KOG0254 Predicted transporter 99.8 2.8E-18 6.2E-23 181.0 11.3 336 42-438 147-492 (513)
9 TIGR01299 synapt_SV2 synaptic 99.7 2.9E-18 6.3E-23 186.1 8.1 138 287-437 602-741 (742)
10 PRK10077 xylE D-xylose transpo 99.7 6.5E-18 1.4E-22 175.9 10.2 319 47-438 130-466 (479)
11 PF00083 Sugar_tr: Sugar (and 99.7 2.1E-20 4.5E-25 193.4 -9.5 332 46-441 111-448 (451)
12 TIGR00879 SP MFS transporter, 99.7 1.8E-17 4E-22 170.5 10.9 333 43-438 133-479 (481)
13 TIGR00898 2A0119 cation transp 99.7 1.3E-17 2.9E-22 175.0 9.9 317 42-438 185-503 (505)
14 COG2211 MelB Na+/melibiose sym 99.7 1.7E-16 3.6E-21 161.9 17.0 303 10-406 62-400 (467)
15 PRK11551 putative 3-hydroxyphe 99.7 8.2E-17 1.8E-21 164.1 14.8 288 43-431 109-398 (406)
16 TIGR00893 2A0114 d-galactonate 99.7 1.3E-16 2.8E-21 159.7 16.0 304 45-426 90-396 (399)
17 PRK09669 putative symporter Ya 99.7 8.7E-17 1.9E-21 166.5 14.8 305 5-405 54-391 (444)
18 PRK10489 enterobactin exporter 99.7 9.4E-16 2E-20 157.2 15.4 282 53-439 126-409 (417)
19 PRK11462 putative transporter; 99.7 2.1E-15 4.6E-20 157.0 17.2 296 10-405 59-390 (460)
20 PRK09874 drug efflux system pr 99.7 1.8E-15 4E-20 153.9 15.9 276 53-430 122-399 (408)
21 TIGR00899 2A0120 sugar efflux 99.7 2E-15 4.4E-20 151.6 15.8 270 52-431 102-375 (375)
22 COG2814 AraJ Arabinose efflux 99.6 3.3E-15 7.1E-20 149.6 16.7 281 42-429 106-386 (394)
23 PRK11663 regulatory protein Uh 99.6 1.7E-15 3.6E-20 156.5 14.9 304 48-436 122-431 (434)
24 PRK11010 ampG muropeptide tran 99.6 2.6E-15 5.6E-20 157.7 16.0 317 12-427 61-401 (491)
25 PRK10642 proline/glycine betai 99.6 2.9E-15 6.2E-20 157.2 15.7 309 46-438 127-438 (490)
26 PRK03545 putative arabinose tr 99.6 6.4E-15 1.4E-19 149.7 16.7 266 53-429 113-380 (390)
27 TIGR00900 2A0121 H+ Antiporter 99.6 3.6E-15 7.7E-20 148.4 12.9 261 46-404 101-365 (365)
28 TIGR00901 2A0125 AmpG-related 99.6 4E-15 8.8E-20 149.0 12.3 291 8-386 32-355 (356)
29 PRK09952 shikimate transporter 99.6 8.1E-15 1.8E-19 151.6 14.2 299 46-433 134-436 (438)
30 PF11700 ATG22: Vacuole efflux 99.6 1.1E-14 2.3E-19 151.6 14.7 339 4-436 78-474 (477)
31 TIGR00712 glpT glycerol-3-phos 99.6 2.9E-14 6.3E-19 147.4 16.5 300 52-433 133-437 (438)
32 PRK10406 alpha-ketoglutarate t 99.6 3.5E-14 7.6E-19 146.5 16.9 295 46-438 133-431 (432)
33 PRK09705 cynX putative cyanate 99.6 2.3E-14 5E-19 146.1 13.4 285 42-436 102-388 (393)
34 PRK09848 glucuronide transport 99.6 2.5E-14 5.4E-19 148.3 13.7 157 229-405 228-391 (448)
35 TIGR00890 2A0111 Oxalate/Forma 99.6 3.2E-14 6.9E-19 142.0 13.9 274 46-422 100-375 (377)
36 cd06174 MFS The Major Facilita 99.6 4.2E-14 9E-19 139.5 14.3 255 42-426 92-349 (352)
37 PRK10473 multidrug efflux syst 99.6 7E-14 1.5E-18 142.0 16.1 253 47-406 101-353 (392)
38 PRK11273 glpT sn-glycerol-3-ph 99.6 4.7E-14 1E-18 146.5 15.1 303 48-435 131-442 (452)
39 PRK11646 multidrug resistance 99.6 6.1E-14 1.3E-18 143.4 15.6 274 45-426 107-385 (400)
40 PRK11902 ampG muropeptide tran 99.6 8.4E-14 1.8E-18 142.2 16.2 274 54-426 111-387 (402)
41 TIGR00883 2A0106 metabolite-pr 99.5 3.2E-14 7E-19 142.9 12.6 270 46-405 105-378 (394)
42 TIGR00710 efflux_Bcr_CflA drug 99.5 2.1E-13 4.5E-18 137.3 18.1 254 42-394 98-354 (385)
43 TIGR00891 2A0112 putative sial 99.5 2E-14 4.4E-19 145.4 10.8 280 45-405 108-393 (405)
44 PRK12382 putative transporter; 99.5 3.9E-14 8.4E-19 143.9 12.7 132 288-430 257-390 (392)
45 PRK11195 lysophospholipid tran 99.5 1.3E-13 2.8E-18 140.6 16.6 292 46-439 97-391 (393)
46 TIGR00881 2A0104 phosphoglycer 99.5 1.9E-14 4.1E-19 143.8 9.9 285 42-405 88-375 (379)
47 PRK12307 putative sialic acid 99.5 4.8E-14 1E-18 144.6 13.0 293 45-433 114-413 (426)
48 PRK11102 bicyclomycin/multidru 99.5 1.5E-13 3.3E-18 138.3 16.4 286 44-431 86-374 (377)
49 PRK15011 sugar efflux transpor 99.5 1.2E-13 2.6E-18 140.7 15.6 266 56-432 124-393 (393)
50 PRK08633 2-acyl-glycerophospho 99.5 6.7E-14 1.5E-18 161.0 15.1 297 47-430 113-411 (1146)
51 TIGR00897 2A0118 polyol permea 99.5 3E-13 6.5E-18 138.2 17.5 176 229-427 222-399 (402)
52 PRK05122 major facilitator sup 99.5 1E-13 2.2E-18 141.1 13.9 137 287-435 256-394 (399)
53 PRK10091 MFS transport protein 99.5 1.2E-13 2.5E-18 140.2 13.8 273 47-428 101-375 (382)
54 PRK10213 nepI ribonucleoside t 99.5 2.7E-13 5.9E-18 138.3 15.1 269 47-427 118-389 (394)
55 PRK15075 citrate-proton sympor 99.5 3.2E-13 7E-18 139.4 14.5 266 48-405 128-397 (434)
56 TIGR02332 HpaX 4-hydroxyphenyl 99.5 4.3E-13 9.3E-18 137.7 15.3 301 46-417 105-409 (412)
57 PF05977 MFS_3: Transmembrane 99.5 3.6E-13 7.9E-18 141.7 14.8 285 47-434 113-400 (524)
58 PRK09556 uhpT sugar phosphate 99.5 1.6E-13 3.5E-18 143.1 11.5 298 48-426 133-446 (467)
59 PF07690 MFS_1: Major Facilita 99.5 4.3E-14 9.4E-19 140.0 6.5 258 45-393 93-352 (352)
60 TIGR00895 2A0115 benzoate tran 99.5 7.1E-14 1.5E-18 140.7 7.8 284 42-399 110-397 (398)
61 PRK15402 multidrug efflux syst 99.5 1.9E-12 4.1E-17 132.2 17.9 279 53-431 117-397 (406)
62 PRK10504 putative transporter; 99.5 4.9E-13 1.1E-17 139.2 13.7 303 45-405 106-418 (471)
63 PRK06814 acylglycerophosphoeth 99.5 5.5E-13 1.2E-17 153.6 15.5 282 44-421 115-414 (1140)
64 PRK10054 putative transporter; 99.5 2.3E-13 5.1E-18 138.9 10.3 265 55-425 114-380 (395)
65 TIGR02718 sider_RhtX_FptX side 99.4 1.2E-12 2.7E-17 132.9 15.2 176 230-425 209-387 (390)
66 PRK09528 lacY galactoside perm 99.4 1.5E-13 3.2E-18 141.1 7.7 138 288-436 270-410 (420)
67 TIGR00903 2A0129 major facilit 99.4 3.2E-12 6.9E-17 129.4 17.0 266 56-433 97-368 (368)
68 TIGR00892 2A0113 monocarboxyla 99.4 1.5E-12 3.3E-17 135.4 14.4 291 48-425 119-417 (455)
69 PRK14995 methyl viologen resis 99.4 8E-13 1.7E-17 138.9 11.7 297 47-400 104-411 (495)
70 TIGR00902 2A0127 phenyl propri 99.4 2.7E-12 5.9E-17 130.2 14.8 269 47-425 104-375 (382)
71 TIGR00711 efflux_EmrB drug res 99.4 4.6E-13 1E-17 139.5 8.9 298 43-401 96-409 (485)
72 PRK03893 putative sialic acid 99.4 1.2E-12 2.6E-17 137.1 11.5 136 285-431 316-456 (496)
73 TIGR00894 2A0114euk Na(+)-depe 99.4 1.9E-12 4.1E-17 134.7 12.8 299 47-427 141-448 (465)
74 TIGR00889 2A0110 nucleoside tr 99.4 8.4E-13 1.8E-17 135.8 10.0 192 231-435 210-408 (418)
75 PRK11128 putative 3-phenylprop 99.4 6E-12 1.3E-16 127.7 14.9 271 48-428 105-378 (382)
76 PRK03699 putative transporter; 99.4 3.9E-12 8.4E-17 129.6 11.7 270 47-425 105-376 (394)
77 PRK03633 putative MFS family t 99.3 6.8E-12 1.5E-16 127.1 12.4 126 287-426 242-369 (381)
78 TIGR00882 2A0105 oligosacchari 99.3 1.2E-11 2.6E-16 125.9 13.9 128 289-427 263-393 (396)
79 TIGR00886 2A0108 nitrite extru 99.3 1E-11 2.2E-16 124.4 10.7 261 47-387 101-364 (366)
80 TIGR01272 gluP glucose/galacto 99.3 5.9E-11 1.3E-15 117.3 15.4 278 38-406 11-294 (310)
81 PRK11043 putative transporter; 99.3 5.6E-11 1.2E-15 121.1 15.6 250 49-402 106-357 (401)
82 PLN00028 nitrate transmembrane 99.3 2.1E-11 4.5E-16 127.7 11.8 281 56-427 142-431 (476)
83 PRK11652 emrD multidrug resist 99.3 5.3E-11 1.2E-15 120.9 13.6 245 53-401 112-359 (394)
84 PRK15403 multidrug efflux syst 99.3 2.1E-10 4.6E-15 117.8 17.6 267 54-419 121-387 (413)
85 TIGR00896 CynX cyanate transpo 99.2 5.2E-11 1.1E-15 119.3 12.3 245 54-405 104-351 (355)
86 PRK10133 L-fucose transporter; 99.2 2.9E-10 6.2E-15 117.8 15.6 288 45-423 125-427 (438)
87 TIGR00788 fbt folate/biopterin 99.2 2E-10 4.2E-15 120.0 14.2 303 46-430 129-446 (468)
88 COG2271 UhpC Sugar phosphate p 99.2 1.8E-10 3.9E-15 114.9 13.1 291 53-429 133-434 (448)
89 KOG2615 Permease of the major 99.2 1.4E-10 2.9E-15 114.0 11.6 79 54-142 137-216 (451)
90 PF03209 PUCC: PUCC protein; 99.2 2.6E-09 5.6E-14 106.9 19.2 271 38-402 90-363 (403)
91 KOG0255 Synaptic vesicle trans 99.1 9E-11 1.9E-15 124.1 7.5 316 46-438 180-501 (521)
92 KOG2532 Permease of the major 99.1 4.7E-10 1E-14 116.4 11.8 299 45-428 136-446 (466)
93 KOG0253 Synaptic vesicle trans 99.1 6.8E-10 1.5E-14 108.6 11.3 326 55-437 183-527 (528)
94 COG2270 Permeases of the major 99.1 3.9E-10 8.5E-15 112.6 9.8 300 42-432 120-431 (438)
95 PRK15034 nitrate/nitrite trans 99.1 1.8E-09 3.9E-14 111.7 14.6 283 53-428 143-453 (462)
96 PRK10054 putative transporter; 99.0 8.9E-10 1.9E-14 112.5 8.4 180 226-432 4-185 (395)
97 PF01306 LacY_symp: LacY proto 98.9 7.5E-09 1.6E-13 105.0 11.5 288 47-435 114-406 (412)
98 PRK11646 multidrug resistance 98.9 2.4E-09 5.3E-14 109.5 7.9 179 225-432 8-188 (400)
99 KOG0252 Inorganic phosphate tr 98.9 3.5E-09 7.7E-14 106.5 8.4 339 45-438 152-506 (538)
100 PRK10207 dipeptide/tripeptide 98.9 8.4E-09 1.8E-13 108.4 11.5 169 226-417 11-182 (489)
101 TIGR00885 fucP L-fucose:H+ sym 98.9 4.1E-08 8.9E-13 100.9 15.4 266 46-403 103-382 (410)
102 COG2223 NarK Nitrate/nitrite t 98.9 3.8E-09 8.3E-14 105.5 7.1 276 54-428 121-400 (417)
103 TIGR00924 yjdL_sub1_fam amino 98.8 2.2E-08 4.8E-13 104.8 12.6 136 288-427 320-466 (475)
104 PF07690 MFS_1: Major Facilita 98.8 1.1E-08 2.4E-13 101.2 9.0 170 235-430 2-173 (352)
105 PRK11195 lysophospholipid tran 98.8 1E-08 2.2E-13 104.7 8.7 175 227-433 1-177 (393)
106 PRK10207 dipeptide/tripeptide 98.8 4.7E-08 1E-12 102.8 13.9 108 288-397 317-436 (489)
107 TIGR00924 yjdL_sub1_fam amino 98.8 1.9E-08 4.2E-13 105.3 11.0 175 226-423 7-186 (475)
108 PRK10091 MFS transport protein 98.8 1.4E-08 3.1E-13 102.9 9.7 180 227-433 1-182 (382)
109 PRK09584 tppB putative tripept 98.8 1.8E-08 3.8E-13 106.2 10.5 183 226-431 18-206 (500)
110 PRK15403 multidrug efflux syst 98.8 6.9E-09 1.5E-13 106.6 6.6 140 284-434 55-196 (413)
111 TIGR00710 efflux_Bcr_CflA drug 98.7 3.7E-08 8E-13 99.0 9.9 141 284-435 44-186 (385)
112 TIGR00900 2A0121 H+ Antiporter 98.7 1.4E-08 3E-13 100.9 6.3 178 233-432 3-183 (365)
113 KOG3764 Vesicular amine transp 98.7 3.6E-08 7.9E-13 97.7 9.0 262 53-425 175-450 (464)
114 TIGR00880 2_A_01_02 Multidrug 98.7 2E-08 4.4E-13 85.1 6.4 133 289-432 7-141 (141)
115 PRK03545 putative arabinose tr 98.7 4.5E-08 9.9E-13 99.4 9.3 137 286-433 50-188 (390)
116 TIGR00711 efflux_EmrB drug res 98.7 3.4E-08 7.4E-13 102.9 8.4 140 284-434 41-182 (485)
117 KOG2816 Predicted transporter 98.7 5.6E-07 1.2E-11 93.4 17.2 260 53-401 128-391 (463)
118 KOG2504 Monocarboxylate transp 98.7 9.3E-08 2E-12 100.5 10.3 175 229-430 298-476 (509)
119 PRK15462 dipeptide/tripeptide 98.7 1.1E-07 2.5E-12 99.3 10.7 174 227-423 7-183 (493)
120 PRK10473 multidrug efflux syst 98.7 8.7E-08 1.9E-12 97.3 9.4 140 285-435 43-184 (392)
121 PRK10504 putative transporter; 98.6 6.6E-08 1.4E-12 100.7 8.6 180 230-436 11-192 (471)
122 PRK10213 nepI ribonucleoside t 98.6 7.2E-08 1.6E-12 98.4 8.6 137 287-434 62-200 (394)
123 TIGR00895 2A0115 benzoate tran 98.6 1.2E-07 2.6E-12 95.3 9.8 136 287-433 59-196 (398)
124 TIGR02332 HpaX 4-hydroxyphenyl 98.6 1.2E-07 2.6E-12 97.3 9.9 137 287-434 50-194 (412)
125 KOG1330 Sugar transporter/spin 98.6 2.9E-08 6.3E-13 100.2 5.0 114 9-144 81-214 (493)
126 PRK11663 regulatory protein Uh 98.6 1.8E-07 3.9E-12 96.7 10.9 136 286-432 64-201 (434)
127 PRK14995 methyl viologen resis 98.6 8.9E-08 1.9E-12 100.8 8.6 142 284-435 45-188 (495)
128 TIGR00891 2A0112 putative sial 98.6 1.5E-07 3.2E-12 95.1 9.9 139 285-433 52-192 (405)
129 PRK15402 multidrug efflux syst 98.6 1.4E-07 3.1E-12 96.2 9.7 140 284-434 52-193 (406)
130 PRK09874 drug efflux system pr 98.6 1.8E-07 3.9E-12 95.1 10.1 182 229-432 14-196 (408)
131 PF03825 Nuc_H_symport: Nucleo 98.6 3.6E-07 7.7E-12 93.5 12.2 182 229-433 207-399 (400)
132 KOG3764 Vesicular amine transp 98.6 6.1E-08 1.3E-12 96.1 6.2 138 284-431 110-249 (464)
133 TIGR00805 oat sodium-independe 98.6 6E-07 1.3E-11 97.3 14.4 230 37-324 172-413 (633)
134 TIGR00899 2A0120 sugar efflux 98.6 1.6E-07 3.4E-12 94.2 9.1 173 236-432 4-179 (375)
135 PRK10489 enterobactin exporter 98.6 7.5E-08 1.6E-12 98.7 5.9 182 229-433 17-200 (417)
136 PRK05122 major facilitator sup 98.6 3.4E-07 7.3E-12 93.1 10.5 176 229-425 15-195 (399)
137 KOG2325 Predicted transporter/ 98.5 9.5E-07 2.1E-11 91.1 13.5 101 41-148 134-238 (488)
138 TIGR00881 2A0104 phosphoglycer 98.5 1.3E-07 2.8E-12 94.3 6.9 137 285-432 35-174 (379)
139 TIGR00897 2A0118 polyol permea 98.5 3.7E-07 8.1E-12 93.2 10.3 159 226-405 10-171 (402)
140 TIGR00886 2A0108 nitrite extru 98.5 3.3E-07 7.1E-12 91.7 9.4 147 232-401 4-151 (366)
141 PRK11551 putative 3-hydroxyphe 98.5 3.3E-07 7.2E-12 93.3 9.0 138 285-433 55-194 (406)
142 KOG2533 Permease of the major 98.5 6.4E-07 1.4E-11 93.7 11.0 210 44-321 141-354 (495)
143 PF05977 MFS_3: Transmembrane 98.5 1.9E-07 4E-12 98.7 7.1 175 229-425 10-186 (524)
144 TIGR00893 2A0114 d-galactonate 98.5 1.6E-07 3.5E-12 93.8 6.3 139 284-433 33-173 (399)
145 TIGR00903 2A0129 major facilit 98.5 2.2E-07 4.8E-12 94.1 7.2 135 288-433 34-169 (368)
146 cd06174 MFS The Major Facilita 98.5 4.2E-07 9.1E-12 89.4 8.6 165 234-425 4-170 (352)
147 PRK12382 putative transporter; 98.5 8E-07 1.7E-11 90.2 10.1 182 229-432 15-201 (392)
148 PRK11652 emrD multidrug resist 98.4 7.4E-07 1.6E-11 90.5 9.7 139 285-434 48-188 (394)
149 PRK08633 2-acyl-glycerophospho 98.4 6.9E-07 1.5E-11 103.2 10.6 113 284-402 51-165 (1146)
150 TIGR00882 2A0105 oligosacchari 98.4 6.2E-07 1.3E-11 91.3 8.5 181 229-431 2-185 (396)
151 TIGR00712 glpT glycerol-3-phos 98.4 6.8E-07 1.5E-11 92.4 8.7 143 284-432 65-209 (438)
152 TIGR01301 GPH_sucrose GPH fami 98.4 8.4E-07 1.8E-11 92.5 9.2 188 230-433 5-222 (477)
153 PRK11043 putative transporter; 98.4 1E-06 2.2E-11 89.8 9.3 136 285-431 46-183 (401)
154 PRK09528 lacY galactoside perm 98.4 8E-07 1.7E-11 91.3 8.4 181 229-431 10-193 (420)
155 PRK03633 putative MFS family t 98.4 1E-06 2.3E-11 89.2 9.1 150 228-402 5-156 (381)
156 TIGR01299 synapt_SV2 synaptic 98.4 1.1E-06 2.4E-11 96.3 9.5 136 287-432 209-357 (742)
157 PRK11102 bicyclomycin/multidru 98.4 6E-07 1.3E-11 90.3 7.0 137 286-433 32-170 (377)
158 PRK15011 sugar efflux transpor 98.4 1.1E-06 2.4E-11 89.4 9.0 180 230-433 16-198 (393)
159 PRK09584 tppB putative tripept 98.4 7.5E-06 1.6E-10 86.4 14.9 98 297-396 337-438 (500)
160 PF03092 BT1: BT1 family; Int 98.4 7.3E-06 1.6E-10 84.9 14.5 119 6-141 33-177 (433)
161 TIGR00879 SP MFS transporter, 98.3 2.1E-06 4.6E-11 88.2 9.2 140 284-432 75-219 (481)
162 KOG2615 Permease of the major 98.3 1.1E-06 2.4E-11 86.9 6.3 134 288-433 76-217 (451)
163 PRK10077 xylE D-xylose transpo 98.3 2.4E-06 5.3E-11 88.9 9.0 145 284-433 59-218 (479)
164 PRK09556 uhpT sugar phosphate 98.3 1.6E-06 3.4E-11 90.5 7.3 140 287-430 71-213 (467)
165 PRK12307 putative sialic acid 98.3 3E-06 6.5E-11 86.8 9.2 135 287-433 60-196 (426)
166 KOG1330 Sugar transporter/spin 98.3 2.3E-07 5E-12 93.8 0.8 136 288-433 76-213 (493)
167 PRK03893 putative sialic acid 98.3 2.8E-06 6E-11 89.0 8.9 136 285-432 60-197 (496)
168 TIGR00898 2A0119 cation transp 98.3 1.8E-06 3.9E-11 90.7 7.4 134 284-432 131-266 (505)
169 PRK06814 acylglycerophosphoeth 98.2 3.2E-06 7E-11 97.8 9.9 139 284-433 56-198 (1140)
170 PRK11273 glpT sn-glycerol-3-ph 98.2 3.9E-06 8.4E-11 87.2 9.5 141 285-432 68-211 (452)
171 PRK09705 cynX putative cyanate 98.2 4.2E-06 9E-11 85.3 8.4 126 284-420 48-175 (393)
172 TIGR00890 2A0111 Oxalate/Forma 98.2 2.8E-06 6.1E-11 84.5 6.8 135 284-430 42-178 (377)
173 PRK03699 putative transporter; 98.2 6.9E-06 1.5E-10 83.6 9.6 129 287-426 49-180 (394)
174 PLN00028 nitrate transmembrane 98.2 6.8E-06 1.5E-10 86.1 9.7 131 288-429 79-219 (476)
175 PRK09952 shikimate transporter 98.2 1E-05 2.2E-10 83.7 10.5 137 291-432 75-222 (438)
176 COG2814 AraJ Arabinose efflux 98.2 5.7E-06 1.2E-10 83.5 8.1 143 277-430 43-189 (394)
177 PRK10642 proline/glycine betai 98.1 1.1E-05 2.4E-10 84.8 10.6 138 290-432 67-215 (490)
178 TIGR00892 2A0113 monocarboxyla 98.1 5.7E-06 1.2E-10 86.2 8.2 130 288-429 62-194 (455)
179 PRK10406 alpha-ketoglutarate t 98.1 1.5E-05 3.2E-10 82.3 11.2 138 291-433 74-222 (432)
180 COG0738 FucP Fucose permease [ 98.1 3.3E-05 7.2E-10 77.3 12.7 55 42-96 109-163 (422)
181 TIGR00887 2A0109 phosphate:H+ 98.1 7.1E-06 1.5E-10 86.5 7.4 139 287-432 63-227 (502)
182 COG2807 CynX Cyanate permease 98.1 6.6E-05 1.4E-09 74.2 13.3 262 37-406 99-363 (395)
183 TIGR00894 2A0114euk Na(+)-depe 98.0 8.1E-06 1.8E-10 85.0 6.9 136 287-431 83-221 (465)
184 TIGR00901 2A0125 AmpG-related 98.0 1.1E-05 2.4E-10 80.6 7.5 130 297-432 38-181 (356)
185 PRK15034 nitrate/nitrite trans 98.0 2.5E-05 5.5E-10 81.1 10.1 142 288-433 78-236 (462)
186 TIGR00883 2A0106 metabolite-pr 98.0 2.2E-05 4.7E-10 78.7 9.0 135 293-432 48-193 (394)
187 KOG4686 Predicted sugar transp 97.9 5E-05 1.1E-09 72.6 9.6 176 229-431 264-444 (459)
188 PRK15075 citrate-proton sympor 97.9 7.1E-05 1.5E-09 77.3 11.7 133 294-432 70-214 (434)
189 TIGR00885 fucP L-fucose:H+ sym 97.9 4.9E-05 1.1E-09 78.1 9.6 110 285-400 43-154 (410)
190 PRK11010 ampG muropeptide tran 97.9 3.9E-05 8.5E-10 80.7 9.0 130 295-433 60-198 (491)
191 COG2271 UhpC Sugar phosphate p 97.9 5.6E-05 1.2E-09 76.1 9.1 133 288-431 72-208 (448)
192 COG3104 PTR2 Dipeptide/tripept 97.9 1.9E-05 4.2E-10 81.0 5.8 185 225-425 17-202 (498)
193 PF06609 TRI12: Fungal trichot 97.9 6.4E-05 1.4E-09 80.1 9.7 152 228-397 309-462 (599)
194 PRK11902 ampG muropeptide tran 97.8 4E-05 8.6E-10 78.2 7.5 132 294-433 46-185 (402)
195 TIGR00896 CynX cyanate transpo 97.8 4.8E-05 1E-09 76.1 7.8 127 284-421 39-167 (355)
196 TIGR00792 gph sugar (Glycoside 97.8 2E-05 4.4E-10 80.9 4.8 148 284-433 39-198 (437)
197 KOG3626 Organic anion transpor 97.8 0.00026 5.6E-09 76.4 13.0 66 31-96 231-296 (735)
198 PRK15462 dipeptide/tripeptide 97.8 0.00023 5.1E-09 74.6 12.3 67 55-136 118-186 (493)
199 KOG0255 Synaptic vesicle trans 97.7 6.2E-05 1.3E-09 79.6 6.7 133 285-432 123-257 (521)
200 PRK10133 L-fucose transporter; 97.7 0.00014 3.1E-09 75.3 9.0 109 285-399 66-176 (438)
201 TIGR00889 2A0110 nucleoside tr 97.6 0.00014 3E-09 74.9 8.3 168 232-432 5-182 (418)
202 TIGR00806 rfc RFC reduced fola 97.6 0.00037 8E-09 72.1 10.8 78 48-140 126-203 (511)
203 COG2223 NarK Nitrate/nitrite t 97.6 0.0002 4.2E-09 72.2 8.4 135 236-395 24-162 (417)
204 PRK11128 putative 3-phenylprop 97.6 0.00033 7.1E-09 71.0 10.1 173 228-432 3-181 (382)
205 TIGR00880 2_A_01_02 Multidrug 97.6 0.00013 2.8E-09 61.4 6.1 84 43-141 57-140 (141)
206 TIGR00805 oat sodium-independe 97.6 8.3E-05 1.8E-09 80.7 5.8 112 288-402 76-234 (633)
207 KOG0254 Predicted transporter 97.6 0.00025 5.5E-09 75.0 9.1 137 284-432 93-232 (513)
208 TIGR00806 rfc RFC reduced fola 97.5 0.00023 5E-09 73.6 7.7 132 290-431 72-204 (511)
209 PF13347 MFS_2: MFS/sugar tran 97.5 7.1E-05 1.5E-09 77.2 2.9 143 285-431 42-200 (428)
210 KOG2563 Permease of the major 97.4 0.0011 2.3E-08 67.6 11.0 75 66-147 169-243 (480)
211 PRK09669 putative symporter Ya 97.3 0.00026 5.6E-09 73.3 5.4 142 284-431 49-206 (444)
212 PRK10429 melibiose:sodium symp 97.3 0.00026 5.6E-09 74.1 4.6 142 285-432 47-204 (473)
213 KOG2816 Predicted transporter 97.2 0.002 4.4E-08 67.1 10.9 137 290-439 72-209 (463)
214 TIGR00902 2A0127 phenyl propri 97.2 0.0018 3.9E-08 65.6 10.0 155 232-417 7-167 (382)
215 PF03137 OATP: Organic Anion T 97.2 8.3E-05 1.8E-09 79.0 0.1 62 35-96 139-200 (539)
216 KOG0569 Permease of the major 97.2 0.0015 3.3E-08 68.0 9.0 136 287-433 67-208 (485)
217 PRK11462 putative transporter; 97.2 0.0005 1.1E-08 71.8 5.6 114 285-404 50-174 (460)
218 PF00083 Sugar_tr: Sugar (and 97.2 3E-05 6.4E-10 80.2 -3.7 138 288-432 54-194 (451)
219 PTZ00207 hypothetical protein; 97.1 0.0011 2.3E-08 71.1 7.4 124 296-429 77-205 (591)
220 KOG2532 Permease of the major 97.0 0.0018 4E-08 67.5 7.3 133 289-430 82-217 (466)
221 TIGR02718 sider_RhtX_FptX side 96.9 0.0023 5E-08 64.9 7.5 171 237-432 9-187 (390)
222 PF01306 LacY_symp: LacY proto 96.9 0.0034 7.3E-08 64.2 8.2 174 229-428 7-187 (412)
223 COG2211 MelB Na+/melibiose sym 96.9 0.0018 3.9E-08 66.9 6.1 135 288-425 56-200 (467)
224 PF06609 TRI12: Fungal trichot 96.8 0.0019 4.1E-08 69.1 6.4 129 287-426 85-214 (599)
225 PTZ00207 hypothetical protein; 96.7 0.012 2.6E-07 63.2 11.5 73 54-144 137-210 (591)
226 PF01770 Folate_carrier: Reduc 96.5 0.017 3.7E-07 58.9 10.4 76 54-143 110-185 (412)
227 PF05631 DUF791: Protein of un 96.5 0.047 1E-06 54.4 12.7 134 291-436 80-223 (354)
228 PRK09848 glucuronide transport 96.4 0.0045 9.8E-08 64.1 5.8 40 285-324 49-93 (448)
229 KOG2504 Monocarboxylate transp 96.4 0.0029 6.3E-08 66.8 4.3 131 288-430 89-222 (509)
230 KOG2533 Permease of the major 96.4 0.0069 1.5E-07 63.6 7.1 138 288-434 89-232 (495)
231 PF03825 Nuc_H_symport: Nucleo 96.4 0.0093 2E-07 61.2 7.9 173 232-433 5-183 (400)
232 COG2807 CynX Cyanate permease 95.8 0.031 6.7E-07 55.7 7.7 123 288-423 55-180 (395)
233 COG0738 FucP Fucose permease [ 95.7 0.026 5.5E-07 57.0 6.5 101 293-401 61-165 (422)
234 PF13000 Acatn: Acetyl-coenzym 95.0 0.75 1.6E-05 48.0 14.9 16 373-388 438-453 (544)
235 PF03092 BT1: BT1 family; Int 94.9 0.031 6.6E-07 58.0 4.8 131 298-431 42-177 (433)
236 PF05978 UNC-93: Ion channel r 94.7 0.037 8E-07 48.9 4.1 104 282-395 39-144 (156)
237 TIGR00788 fbt folate/biopterin 94.6 0.041 8.8E-07 57.6 4.7 55 47-103 361-415 (468)
238 PF11700 ATG22: Vacuole efflux 94.1 0.073 1.6E-06 55.9 5.4 83 46-143 389-471 (477)
239 PF12832 MFS_1_like: MFS_1 lik 94.0 0.15 3.2E-06 39.4 5.5 71 233-319 4-74 (77)
240 COG3104 PTR2 Dipeptide/tripept 93.6 0.23 5E-06 51.6 7.6 106 13-138 78-205 (498)
241 COG2270 Permeases of the major 93.1 0.17 3.7E-06 51.5 5.7 83 45-142 349-431 (438)
242 TIGR00769 AAA ADP/ATP carrier 92.8 2.3 4.9E-05 44.6 13.8 54 42-95 133-187 (472)
243 KOG0252 Inorganic phosphate tr 92.6 0.32 6.9E-06 50.1 6.9 96 293-394 97-198 (538)
244 PF02487 CLN3: CLN3 protein; 92.3 1.7 3.7E-05 44.5 11.8 87 307-399 304-394 (402)
245 PF01770 Folate_carrier: Reduc 92.1 0.66 1.4E-05 47.5 8.5 182 230-437 6-189 (412)
246 KOG2325 Predicted transporter/ 91.5 0.95 2.1E-05 47.3 9.0 142 285-431 76-231 (488)
247 KOG3810 Micronutrient transpor 91.3 3.4 7.4E-05 41.3 12.1 42 54-95 111-152 (433)
248 PF06963 FPN1: Ferroportin1 (F 91.2 2.3 5E-05 44.0 11.5 102 289-394 302-410 (432)
249 PF03209 PUCC: PUCC protein; 90.8 0.37 8E-06 49.0 5.1 105 297-403 31-152 (403)
250 KOG2563 Permease of the major 89.4 1.3 2.8E-05 45.6 7.6 137 238-402 57-202 (480)
251 PF06813 Nodulin-like: Nodulin 88.6 2 4.4E-05 41.0 8.1 101 296-400 52-155 (250)
252 PF00854 PTR2: POT family; In 87.1 1.7 3.7E-05 43.8 7.1 91 32-137 28-121 (372)
253 KOG3098 Uncharacterized conser 86.3 23 0.00051 36.9 14.8 49 42-90 107-155 (461)
254 KOG3574 Acetyl-CoA transporter 85.7 6.4 0.00014 40.0 9.8 47 45-95 141-187 (510)
255 KOG0253 Synaptic vesicle trans 85.2 1.5 3.2E-05 44.3 5.1 124 295-431 128-252 (528)
256 KOG3762 Predicted transporter 83.8 2 4.2E-05 45.4 5.5 46 50-95 472-518 (618)
257 TIGR00926 2A1704 Peptide:H+ sy 83.5 32 0.00069 37.8 15.0 96 34-137 82-180 (654)
258 COG0477 ProP Permeases of the 83.4 1.3 2.7E-05 41.3 3.8 110 287-402 46-158 (338)
259 TIGR00926 2A1704 Peptide:H+ sy 82.5 4.4 9.6E-05 44.3 8.0 136 289-424 32-177 (654)
260 PF03219 TLC: TLC ATP/ADP tran 82.0 28 0.00061 36.7 13.4 48 46-93 152-200 (491)
261 KOG4332 Predicted sugar transp 81.0 3.9 8.6E-05 39.5 6.0 124 292-423 84-214 (454)
262 KOG3762 Predicted transporter 78.9 2.2 4.7E-05 45.0 3.9 113 300-423 426-541 (618)
263 PF05631 DUF791: Protein of un 76.7 88 0.0019 31.5 14.8 91 39-142 123-219 (354)
264 KOG4686 Predicted sugar transp 73.9 10 0.00022 37.1 6.7 54 42-95 357-410 (459)
265 PF00854 PTR2: POT family; In 63.9 15 0.00033 36.9 6.0 112 311-425 2-119 (372)
266 KOG1479 Nucleoside transporter 60.6 20 0.00043 36.7 6.0 39 34-72 114-152 (406)
267 PF06645 SPC12: Microsomal sig 59.0 27 0.00058 26.8 5.1 56 70-146 5-60 (76)
268 TIGR00939 2a57 Equilibrative N 58.6 17 0.00037 37.8 5.3 39 288-326 53-91 (437)
269 TIGR00769 AAA ADP/ATP carrier 57.7 16 0.00035 38.4 5.0 103 295-400 59-189 (472)
270 TIGR01272 gluP glucose/galacto 55.6 10 0.00022 37.2 3.0 45 354-400 26-70 (310)
271 PF07672 MFS_Mycoplasma: Mycop 54.2 74 0.0016 30.6 8.3 25 114-138 37-61 (267)
272 PRK03612 spermidine synthase; 52.2 27 0.00058 37.2 5.7 34 373-406 142-176 (521)
273 PF06963 FPN1: Ferroportin1 (F 51.0 56 0.0012 33.9 7.7 81 229-324 2-82 (432)
274 PF06813 Nodulin-like: Nodulin 50.6 41 0.00088 32.1 6.1 66 62-144 121-186 (250)
275 KOG4112 Signal peptidase subun 48.5 41 0.00089 26.7 4.6 26 70-95 20-45 (101)
276 KOG0637 Sucrose transporter an 46.6 15 0.00032 38.2 2.6 151 229-397 32-200 (498)
277 PF03137 OATP: Organic Anion T 45.2 7.4 0.00016 41.6 0.1 110 288-400 46-201 (539)
278 PF02990 EMP70: Endomembrane p 40.6 47 0.001 35.4 5.3 28 283-310 300-327 (521)
279 COG5336 Uncharacterized protei 37.2 1.4E+02 0.0029 24.7 6.1 49 270-323 37-86 (116)
280 KOG3787 Glutamate/aspartate an 32.7 1.9E+02 0.0041 30.1 7.8 51 248-305 157-212 (507)
281 TIGR00986 3a0801s05tom22 mitoc 32.4 1.2E+02 0.0027 26.2 5.5 28 60-87 56-83 (145)
282 PF04281 Tom22: Mitochondrial 29.6 1.5E+02 0.0032 25.6 5.6 29 61-89 59-87 (137)
283 TIGR00939 2a57 Equilibrative N 29.3 61 0.0013 33.6 3.9 54 41-94 376-429 (437)
284 KOG2881 Predicted membrane pro 29.3 2.5E+02 0.0054 27.0 7.4 37 285-321 245-281 (294)
285 PF02487 CLN3: CLN3 protein; 27.7 72 0.0016 32.8 4.0 47 49-95 347-393 (402)
286 COG0477 ProP Permeases of the 27.3 75 0.0016 29.0 3.9 48 48-95 105-154 (338)
287 PF06779 DUF1228: Protein of u 25.9 2.7E+02 0.0059 21.8 6.1 40 292-331 39-78 (85)
288 PF01733 Nucleoside_tran: Nucl 24.7 26 0.00056 34.4 0.2 297 41-400 1-308 (309)
289 KOG3098 Uncharacterized conser 24.7 89 0.0019 32.7 4.1 91 294-394 64-156 (461)
290 CHL00031 psbT photosystem II p 21.8 1.5E+02 0.0032 18.8 3.0 16 131-146 15-30 (33)
291 PF05978 UNC-93: Ion channel r 20.9 1.6E+02 0.0035 25.8 4.4 53 42-94 94-146 (156)
292 KOG2601 Iron transporter [Inor 20.5 1.1E+02 0.0025 31.2 3.7 54 42-102 398-451 (503)
No 1
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=100.00 E-value=6.6e-56 Score=457.06 Aligned_cols=372 Identities=46% Similarity=0.862 Sum_probs=307.0
Q ss_pred eehhHhhchhhHHhhhcCCcccccccCCCcceehhhHHHHHHHHhccccccchhhHHHHhcCCCccch--hhHHHHHHHH
Q 013336 4 VAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQR--NSANAIFCSW 81 (445)
Q Consensus 4 i~l~~l~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr--~~a~~~~~~~ 81 (445)
+++++++++++++..++|+.+ +..+++.++.++++++++|++.|+.++|.||+++|.+|++|| +.++++++.+
T Consensus 86 ~~l~ll~~~~~~~~~~~~~~~-----~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~ 160 (477)
T TIGR01301 86 FAVILIGFAADIGHLFGDNLD-----KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFF 160 (477)
T ss_pred HHHHHHHhCchhhhhcccccc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHH
Confidence 455666666666666665421 233455666778888999999999999999999999999876 5899999999
Q ss_pred HHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCC
Q 013336 82 MAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDD 161 (445)
Q Consensus 82 ~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~ 161 (445)
.++|+++||.+|++++|.+.+++..+..+++.+.++|..|+++++++++++++|++++||+|+..+++.+.+ +
T Consensus 161 ~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~-~------ 233 (477)
T TIGR01301 161 MAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS-E------ 233 (477)
T ss_pred HHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh-h------
Confidence 999999999999986566777877777778888999999999999999999999999999875332211000 0
Q ss_pred cccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHH
Q 013336 162 PQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALT 241 (445)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~ 241 (445)
.. +.++.+....++++++++++|||++|++|++||++
T Consensus 234 ---------------------------------------~~----~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffs 270 (477)
T TIGR01301 234 ---------------------------------------AA----PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLN 270 (477)
T ss_pred ---------------------------------------cc----cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 00 00001123568999999999999999999999999
Q ss_pred HHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC-chhhHHHHHHHH
Q 013336 242 WLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG-SRLVWAISNFIV 320 (445)
Q Consensus 242 ~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g-~r~l~~~g~~~~ 320 (445)
|+||+++++|.|+||+|++|+++|. +.+.|++|+|+|+++++++++++.++|++++++.+|+| ||++|.+|+++.
T Consensus 271 W~a~f~~~~y~T~~vg~~v~~~~~~----~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~ 346 (477)
T TIGR01301 271 WIAWFPFILFDTDWMGREVYGGSVN----QGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIIL 346 (477)
T ss_pred HHHHHHHHHhccHHHHHHHcCCCCc----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 9999999999999999999999764 34689999999999999999999999999999999998 588899999999
Q ss_pred HHHHHHHHHhhhccccc-c--------C-----Ccceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHH
Q 013336 321 FACMATTAIISVISVRE-Y--------S-----GGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLA 384 (445)
Q Consensus 321 ai~~~~~~~~~~~~~~~-~--------~-----~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~ 384 (445)
++|++.+.+++...+|. + . .+..++.++.+|+. +++++||+|++++++++.+++|.|||++|++
T Consensus 347 ~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~ 426 (477)
T TIGR01301 347 AICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLA 426 (477)
T ss_pred HHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHH
Confidence 99999988887532110 0 0 01233445668887 8899999999999997667899999999999
Q ss_pred HHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCC
Q 013336 385 IVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 434 (445)
Q Consensus 385 ~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~ 434 (445)
+++||+++++..|++.+.+|+++.+++.++|++++++++++.+.+|+++.
T Consensus 427 I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 427 IVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999888999888889999999999999999999999875
No 2
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-51 Score=403.33 Aligned_cols=358 Identities=43% Similarity=0.785 Sum_probs=275.7
Q ss_pred CeeeehhHhhchhhHHhhhcCCcccccccCCCcceehhhHHHHHHHHhccccccchhhHHHHhcCCCccchhh-HHHHHH
Q 013336 1 MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNS-ANAIFC 79 (445)
Q Consensus 1 ~~~i~l~~l~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~-a~~~~~ 79 (445)
+|++++.+++|+.||+..++|..+ ...++++++++++|+|++|+++|.+|.|+|||+.|.+.+++|.+ +|++++
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~-----~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNER-----KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcc-----cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 467899999999999999999874 23788999999999999999999999999999999999888877 999999
Q ss_pred HHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCC
Q 013336 80 SWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLL 159 (445)
Q Consensus 80 ~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l 159 (445)
+++++|+++||.+|++.+|.+.++|..+..+...+.+.+..|+..+.+..+.....+....|+|........
T Consensus 186 ~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~-------- 257 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTA-------- 257 (498)
T ss_pred HHHHhcceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccc--------
Confidence 999999999999999888988888877777777777888887777776666555554444444332221000
Q ss_pred CCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHH
Q 013336 160 DDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMA 239 (445)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f 239 (445)
+.+ .....-+-+++.++++||+++|.+|+++.
T Consensus 258 ----------------------------------~~~--------------~~~~~~~~e~fG~~~~mpr~m~~L~i~~l 289 (498)
T KOG0637|consen 258 ----------------------------------RSK--------------SSKLPFLLEIFGALKVMPRPMRMLLIVTL 289 (498)
T ss_pred ----------------------------------ccc--------------ccCcchHHHHhchHhhCChhHHHHHHHHH
Confidence 000 00011233666789999999999999999
Q ss_pred HHHHhhhhhhhccccccceeeecCCCCCC--ChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHH
Q 013336 240 LTWLSWFPFFLFDTDWMGREVYHGDPKGN--DHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISN 317 (445)
Q Consensus 240 ~~~~g~~~~~~y~t~~v~~~if~g~p~~~--s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~ 317 (445)
+.|++|+++..|+||||||++|+|||+++ |+..+.||+||++|+||+++|+++..++|..++++.||+|-|+.+..+.
T Consensus 290 ltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~ 369 (498)
T KOG0637|consen 290 LTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGV 369 (498)
T ss_pred HHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehh
Confidence 99999999999999999999999999984 5788999999999999999999999999999999999999666655544
Q ss_pred HHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhc---------------------cCCCCc
Q 013336 318 FIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTA---------------------DSGGGQ 374 (445)
Q Consensus 318 ~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~---------------------~~~~~~ 374 (445)
..+.++...++... +.+ .+..-....|+. ...++||+++++|+- ++++++
T Consensus 370 ~~f~~~~~~~gl~~----~~~---~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~ 442 (498)
T KOG0637|consen 370 NAFGLATGLAGLVL----NTY---VVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQ 442 (498)
T ss_pred HHHHHHHHHHhhhh----hHH---HHHHHHhhcceeecchhcccHHHHHHHHHhCCccccccccccccccccccCccCCC
Confidence 43444333222221 222 122223334433 455666666666652 345788
Q ss_pred ccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhe
Q 013336 375 GLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 427 (445)
Q Consensus 375 G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~ 427 (445)
|+++|++|+++++||++++...|++++.+|+.+...+..+++..+++.+ +.+
T Consensus 443 G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~~i-~al 494 (498)
T KOG0637|consen 443 GLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIGGI-VAL 494 (498)
T ss_pred CceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHHHH-Hhe
Confidence 9999999999999999999999999999999876555555554444444 444
No 3
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.8e-24 Score=221.79 Aligned_cols=337 Identities=16% Similarity=0.175 Sum_probs=230.1
Q ss_pred HHHHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhH
Q 013336 40 FVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKA 119 (445)
Q Consensus 40 ~v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (445)
.++|=.++.++.....+....|+.|.+|++.||....++.+...+|.++|..+| .++++| +. ..|++
T Consensus 119 li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~----l~~ilG---t~------~~W~~ 185 (485)
T KOG0569|consen 119 LILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLG----LPSLLG---TE------DLWPY 185 (485)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHc----cHHhcC---CC------cchHH
Confidence 336777788888888999999999999999999999999999999999998877 344443 21 35667
Q ss_pred HHHHHHHHHHHHHhheeeEeeccCCCCCC-CCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhc
Q 013336 120 AFLVAVVFLTLCALVTIYFADEVPLTVNQ-PNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHI 198 (445)
Q Consensus 120 ~f~i~ai~~~i~~~~t~~~v~E~p~~~~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (445)
.+.+..++.++..+ .+.++||+|.+... +++.++|++.+ ++. .| +++.+++.+.+.
T Consensus 186 l~~~~~i~~~~~l~-~l~~~PESPk~Ll~~k~~~~~A~~sl--------~~y----------~G---~~~~~~~~e~~~- 242 (485)
T KOG0569|consen 186 LLAFPLIPALLQLA-LLPFLPESPKYLLIKKGDEEEARKAL--------KFY----------RG---KEDVEAEIEEML- 242 (485)
T ss_pred HHHHHHHHHHHHHH-HHhcCCCCcchHHHHcCCHHHHHHHH--------HHH----------hC---CCcchhHHHHHH-
Confidence 77777776666544 56789999998765 55544443221 110 11 111111111110
Q ss_pred cccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHH-hhhhhhhccccccceeeecCCCCCCChhhHHHHH
Q 013336 199 SKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWL-SWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQ 277 (445)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~-g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~ 277 (445)
+..++ ++.++.++.+++++++. .++.+++...+.+++.+++ |..+..+|.|+...+.=+.. +
T Consensus 243 -~e~~~--~~~~~~~~~sl~~~~~~-~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~------------~- 305 (485)
T KOG0569|consen 243 -REIEE--EELEKKKQISLRQLLKN-PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTP------------E- 305 (485)
T ss_pred -HHHHH--hccccccCCcHHHHhcC-cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCH------------H-
Confidence 00000 01111245678888775 3334556666778888777 77788888887554321110 1
Q ss_pred HhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceee-eccc----ccc
Q 013336 278 GVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHG-IGAN----QAI 352 (445)
Q Consensus 278 gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~Gi 352 (445)
...++...-+++..+.+++.+.++||+|||++++++..+++++.+.+.+..... +....|.... +.++ +++
T Consensus 306 ---~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~-~~~~~~~~y~~i~~~~~~~~~f 381 (485)
T KOG0569|consen 306 ---EAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLS-NSFGSWLSYLCIAAIFLFIISF 381 (485)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHhh
Confidence 122344445678888999999999999999999999999988876555443322 2110001111 1111 111
Q ss_pred c-eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 353 K-ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 353 ~-~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
. -..++||-+.+|.+|++ .|...+++....+++.+++....+.++.+.+|. ..|+.+.+.+.+.+++.++++||
T Consensus 382 ~~G~gpi~~fi~aELf~~~--~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~---~~filF~i~~~~~~i~~~~~lPE 456 (485)
T KOG0569|consen 382 AIGPGPIPWFIGAELFPQS--ARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP---YVFILFVIPLAIFLIYLYRYLPE 456 (485)
T ss_pred hcCCCchhHHHHHHhCCcc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---hhhHHHHHHHHHHHHHHHHhCcc
Confidence 1 34689999999999997 578999999999999999999999999999984 47888999999999999999999
Q ss_pred CCCCCcc
Q 013336 432 LSSNSFR 438 (445)
Q Consensus 432 ~~~~~~~ 438 (445)
||||++.
T Consensus 457 Tkgr~~~ 463 (485)
T KOG0569|consen 457 TKGRTPY 463 (485)
T ss_pred cCCCCHH
Confidence 9999974
No 4
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.84 E-value=7.3e-21 Score=196.00 Aligned_cols=303 Identities=19% Similarity=0.221 Sum_probs=216.4
Q ss_pred hchhhHHhhhcCCcccccccCCCcceehhh---------------------------HHHHHHHHhccccccchhhHHHH
Q 013336 10 GFSADIGYILGDTKEHCSKFRGTRTRAAFV---------------------------FVIGFWLLDLANNTVQGPARALL 62 (445)
Q Consensus 10 ~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~---------------------------~v~g~~lld~s~n~~~~p~~A~i 62 (445)
+..+++-..++|++ ++|+||||||.++. ..+.++++|++.+..+.|.+|++
T Consensus 51 ai~dp~~G~~sDr~--~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~ 128 (428)
T PF13347_consen 51 AITDPLIGYLSDRT--RTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALI 128 (428)
T ss_pred hhcCCcEEEEEeee--cccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcC
Confidence 44555556678998 59999999998742 12455578999999999999999
Q ss_pred hcCCC-ccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeec
Q 013336 63 ADLSG-PDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADE 141 (445)
Q Consensus 63 ~D~~p-~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E 141 (445)
+|.++ ++||.+..++...+..+|.++...+...+ +. .++ +. ....++++.+.+.+++.+++.+++++.+||
T Consensus 129 ~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l-~~-~~g---~~---~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 129 PELTPDPDERTRLSSWRMIFSMIGSLLASFLAPIL-VS-WFG---GG---DTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred ccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhh-hh-hhc---cC---ccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 99998 58999999999999999997666665542 21 221 11 000268999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccchHHHHH
Q 013336 142 VPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLL 221 (445)
Q Consensus 142 ~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (445)
++....++ .++.++++.+
T Consensus 201 ~~~~~~~~--------------------------------------------------------------~~~~~~~~~~ 218 (428)
T PF13347_consen 201 RSVEVTEQ--------------------------------------------------------------EKKISLRDSL 218 (428)
T ss_pred cccccccc--------------------------------------------------------------ccccccccch
Confidence 21111110 0122344445
Q ss_pred HHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhh
Q 013336 222 TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIE 301 (445)
Q Consensus 222 ~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~ 301 (445)
+.+++. |+++.++...++.|+++.....+..+|... +.+.+ . ..........+.+.+.+.+.+
T Consensus 219 ~~~~~n-r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~-vl~~~-~--------------~~~~~~~~~~~~~~v~~~~~~ 281 (428)
T PF13347_consen 219 RSLFRN-RPFRILLLAFFLQWLAFALMNTFLPYYFTY-VLGNE-G--------------LISIFMLIFFVASIVGSPLWG 281 (428)
T ss_pred hhhccc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHH-HhcCc-h--------------hhHHHHHHHHHHHHHHHHHHH
Confidence 555554 568888889999888877666555554443 32221 0 111223355677788889999
Q ss_pred hhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC-----CCCc
Q 013336 302 PMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS-----GGGQ 374 (445)
Q Consensus 302 ~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~-----~~~~ 374 (445)
++.||+|+|+.+..+.++.+++++...+... .+.+ ...+...+.|++ ..+.+|+++++|..+.+ +|..
T Consensus 282 ~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~ 356 (428)
T PF13347_consen 282 RLSKRFGKKKVYIIGLLLAALGFLLLFFLGP--GSPW---LVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRRE 356 (428)
T ss_pred HHHHHccceeehhhhHHHHHHHHHHHHHHHh--hhHH---HHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCch
Confidence 9999999999999999999998877666642 1322 233334456665 67789999999999853 3567
Q ss_pred ccchhHHHHHHHHHHHHhhhccccccccccCc
Q 013336 375 GLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG 406 (445)
Q Consensus 375 G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~ 406 (445)
|.++|+++++.-++|.+++.+.|.+.+..|.+
T Consensus 357 g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 357 GMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 99999999999999999999999887776654
No 5
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.82 E-value=2.2e-19 Score=184.66 Aligned_cols=334 Identities=12% Similarity=0.054 Sum_probs=209.4
Q ss_pred hHhhchhhHHhhhcCCcccccccCCCcceehhhH---HHHH----------------------HHHhccccccchhhHHH
Q 013336 7 IIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVF---VIGF----------------------WLLDLANNTVQGPARAL 61 (445)
Q Consensus 7 ~~l~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~~---v~g~----------------------~lld~s~n~~~~p~~A~ 61 (445)
+.-+.++.+...++|++ ++|+||||||.+... .++. .+++.+......|..++
T Consensus 46 i~~~i~~p~~G~lsDr~--~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 123 (437)
T TIGR00792 46 ILDAITDPIMGNIVDRT--RTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSL 123 (437)
T ss_pred HHHHhccchheEeeecC--CCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhC
Confidence 33456677777889998 478999999876421 1111 12333344456788999
Q ss_pred HhcCCC-ccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEee
Q 013336 62 LADLSG-PDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFAD 140 (445)
Q Consensus 62 i~D~~p-~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~ 140 (445)
.+|.++ +++|++++++...+..+|..++..+.+. +...++ .. .....+++.+.+.+++.+++.++....+|
T Consensus 124 ~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~--l~~~~~---~~---~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 195 (437)
T TIGR00792 124 VPAITLDPRERESLSTFRRFGATLGGLLVAVIVLP--LVSYFG---GG---DDKFGWFMFALVLALIGVVSLIICFFGTK 195 (437)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhC---CC---cccccHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 999984 6899999999999988888877665433 111111 00 01136888898888877777777777888
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccchHHHH
Q 013336 141 EVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNL 220 (445)
Q Consensus 141 E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (445)
|++....+++ .++.++++.
T Consensus 196 e~~~~~~~~~-------------------------------------------------------------~~~~~~~~~ 214 (437)
T TIGR00792 196 ERYSEIPKNI-------------------------------------------------------------EKKLSLKQI 214 (437)
T ss_pred ecCCCCCccc-------------------------------------------------------------ccCCCHHHH
Confidence 8641100000 001123444
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhh
Q 013336 221 LTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLI 300 (445)
Q Consensus 221 ~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~ 300 (445)
++.+.+. |.++.+++..++.+++......+.+.|..+ .++ ++. . .+ +...+..+...+.+++.
T Consensus 215 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~---------~----~~-~~~~~~~i~~ii~~~~~ 277 (437)
T TIGR00792 215 FKALFKN-DQLLILCLAYLFYNLAFNIKNGVQVYYFTY-VLG-DPE---------L----FS-YMGSIAIVAGLIGVLLF 277 (437)
T ss_pred HHHHhCC-HHHHHHHHHHHHHHHHHHHHcchhheeEee-ecC-ChH---------H----HH-HHHHHHHHHHHHHHHHH
Confidence 4454443 567778888888888777655555544433 332 210 1 11 22234566777888899
Q ss_pred hhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC-----CCC
Q 013336 301 EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS-----GGG 373 (445)
Q Consensus 301 ~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~-----~~~ 373 (445)
+++.||+|+|+++.++.++++++++...+.. .+.+ ...+...+.|++ .....+++++++..+.+ .|.
T Consensus 278 ~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (437)
T TIGR00792 278 PRLVKKFGRKILFAGGILLMVLGYLIFFFAG---SNLP---LILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRA 351 (437)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc---hhHH---HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccc
Confidence 9999999999999999888887766544432 1211 112222334444 55677889999887632 356
Q ss_pred cccchhHHHHHHHHHHHHhhhccccccccccCcch-------------hHHHHHHHHHHHHHHhhheeccCCCC
Q 013336 374 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNI-------------PAFVLASLSALAGGVVATLKLPHLSS 434 (445)
Q Consensus 374 ~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~-------------~~f~~~~v~~ll~~~~~~~~vpe~~~ 434 (445)
.|..+|+.|.+..+++.+++.+.|.+.+..|.+.. ...++.+++.+++.++..++.|.|+.
T Consensus 352 ~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~~~~~~~y~l~~~ 425 (437)
T TIGR00792 352 EGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSPITLNGIKILMFAVPALFLLLAAIIIGRFYKLTEK 425 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHeeCcHH
Confidence 79999999999999999999999998877664310 12334445555565554325555543
No 6
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.77 E-value=4.1e-18 Score=179.18 Aligned_cols=352 Identities=11% Similarity=-0.010 Sum_probs=191.6
Q ss_pred HHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhccc-ch--h----hh---cc
Q 013336 44 FWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLT-SR--A----CC---AA 113 (445)
Q Consensus 44 ~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~-~~--~----~~---~~ 113 (445)
-.+..++.....++..+|+.|.+|+++|+++.++...+..+|.++|+.++.+. .. .+...+ .. . ++ ..
T Consensus 122 r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 199 (502)
T TIGR00887 122 RFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV-LA-GFKHSLEAAADEASCTGSCVPAV 199 (502)
T ss_pred HHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-Hhccccccccccccccccccchh
Confidence 33456666677788999999999999999999999999999999999887642 11 000000 00 0 00 00
Q ss_pred ccchhHHHHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCC-CCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccc
Q 013336 114 CGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTD-SAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESD 192 (445)
Q Consensus 114 ~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (445)
...||++|.+.++..++..+ ..+++||+|.+...+++.++ +++.+ .+... ++ .++..+|
T Consensus 200 ~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~--------~~~~~---------~~--~~~~~~~ 259 (502)
T TIGR00887 200 DYMWRILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDM--------SAVLQ---------VK--IEAEPDE 259 (502)
T ss_pred cccHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHH--------HHHhc---------cc--cccCccc
Confidence 12599999888877666544 34678999987654433211 11000 00000 00 0000000
Q ss_pred hhhhhccccccccCCCCCCCccchHHHHHHHhccCCHHHHHH---HHHHHHHHHhhhhhhhccccccceeeecCCCCCCC
Q 013336 193 ANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVV---LIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGND 269 (445)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l---~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s 269 (445)
.+. .++ + ++..+.+++++++... .++..+.+ +...+...+.+++...|.++++.+ .+-++..
T Consensus 260 ~~~------~~~--~--~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~--~G~~~~~-- 324 (502)
T TIGR00887 260 VEK------AST--A--VEVPKASWSDFFTHFF-KWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA--IGYSPPA-- 324 (502)
T ss_pred ccc------hhc--c--ccchhhhHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH--HcCCCCc--
Confidence 000 000 0 0011234666665321 11222222 122222223334455555555543 1222210
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccc
Q 013336 270 HEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGAN 349 (445)
Q Consensus 270 ~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (445)
.....|++-........++..+...+..++.++++||+|||++.+++.+++++++..+.+..... +... ........
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~-~~~~--~~~~~~~~ 401 (502)
T TIGR00887 325 ATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL-STHG--FLAIYVLA 401 (502)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc-chhH--HHHHHHHH
Confidence 00011111000000011122334445567788999999999999988888887776555432110 0000 01111111
Q ss_pred ccc-c-eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccccccc--------CcchhHHHHHHHHHH
Q 013336 350 QAI-K-ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG--------GGNIPAFVLASLSAL 419 (445)
Q Consensus 350 ~Gi-~-~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g--------~~~~~~f~~~~v~~l 419 (445)
..+ . ....+++++.+|++|.+ .+|+.+|+.|....++.++++.+.+.+.+..+ ......|.+.+++++
T Consensus 402 ~~~~~~~~~~~~~~~~~E~~p~~--~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 479 (502)
T TIGR00887 402 QFFANFGPNATTFIVPGEVFPTR--YRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMF 479 (502)
T ss_pred HHHHhcCCCchhhhhhhccCchh--HHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHH
Confidence 111 1 23456778889999986 57888999999999999999999998877431 111235777777777
Q ss_pred HHHHhhheeccCCCCCCcc
Q 013336 420 AGGVVATLKLPHLSSNSFR 438 (445)
Q Consensus 420 l~~~~~~~~vpe~~~~~~~ 438 (445)
+++++. +++||||||+..
T Consensus 480 ~~~i~~-~~lpEt~~~~le 497 (502)
T TIGR00887 480 LGILFT-LLIPETKGKSLE 497 (502)
T ss_pred HHHHHh-eEeccCCCCCHH
Confidence 777754 788999999864
No 7
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.76 E-value=9.8e-18 Score=175.11 Aligned_cols=311 Identities=12% Similarity=0.091 Sum_probs=194.5
Q ss_pred hHhhchhhHHhhhcCCcccccccCCCcceehhhHH---HHH----------------------HHHhccccccchhhHHH
Q 013336 7 IIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFV---IGF----------------------WLLDLANNTVQGPARAL 61 (445)
Q Consensus 7 ~~l~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~~v---~g~----------------------~lld~s~n~~~~p~~A~ 61 (445)
+.=+.++++...++|++ ++|+|+||||.++.++ +++ .+.+++......|..|+
T Consensus 53 i~dai~dp~~G~lsD~t--~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al 130 (473)
T PRK10429 53 IWDAINDPIMGWIVNNT--RSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSL 130 (473)
T ss_pred HHHHHhhchheeehhcC--CCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhh
Confidence 33455666777889998 5899999999764222 111 12334444567889999
Q ss_pred HhcCC-CccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEee
Q 013336 62 LADLS-GPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFAD 140 (445)
Q Consensus 62 i~D~~-p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~ 140 (445)
++|.+ +++||.+.+++...+..+|+.++..++... . +.++ .. .....++....+.+++.+++.++++...|
T Consensus 131 ~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~-~-~~~g---~~---~~~~g~~~~~~i~~~~~~~~~~~~~~~~~ 202 (473)
T PRK10429 131 VPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPF-V-NYVG---GG---DRGFGFQMFTLVLIAFFIVSTIITLRNVH 202 (473)
T ss_pred hHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHhC---CC---chhhhHHHHHHHHHHHHHHHHHHHHcCce
Confidence 99999 589999999998888888766665443210 0 1111 00 00113566667777777777777777788
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccchHHHH
Q 013336 141 EVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNL 220 (445)
Q Consensus 141 E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (445)
|++..+.++.+ ++++.++++.
T Consensus 203 e~~~~~~~~~~-----------------------------------------------------------~~~~~~~~~~ 223 (473)
T PRK10429 203 EVYSSDNQVSA-----------------------------------------------------------EGSHLTLKDI 223 (473)
T ss_pred ecCCccccccc-----------------------------------------------------------cccCCCHHHH
Confidence 86422111000 0012346666
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhh
Q 013336 221 LTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLI 300 (445)
Q Consensus 221 ~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~ 300 (445)
++.+.+. |+++.++...++.+.+......+..+|+.. . .+++ + ..+ +.+.+.++..++..++.
T Consensus 224 ~~~~~~n-~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y-~-~~~~----------~---~~~-~~~~~~~i~~ii~~~~~ 286 (473)
T PRK10429 224 VALIYKN-DQLSCLLGMALAYNIASNIINGFAIYYFTY-V-IGDA----------D---LFP-YYLSYAGAANLVTLILF 286 (473)
T ss_pred HHHHhcC-HHHHHHHHHHHHHHHHHHHHhhheeeEEEE-E-CCCH----------H---HHH-HHHHHHHHHHHHHHHHH
Confidence 6666564 778888888888888777666666655543 2 2221 0 011 22234456667777888
Q ss_pred hhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC-----CCC
Q 013336 301 EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS-----GGG 373 (445)
Q Consensus 301 ~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~-----~~~ 373 (445)
+++.||+|+|+.+.++.++..++.+...+......+... ...+...+.|++ .....++++++|..+.+ .|.
T Consensus 287 ~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~ 364 (473)
T PRK10429 287 PRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNAL--LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRC 364 (473)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccc
Confidence 999999999999998877766555443332111111110 111122234444 55677889999987632 356
Q ss_pred cccchhHHHHHHHHHHHHhhhccccccccccC
Q 013336 374 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 405 (445)
Q Consensus 374 ~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~ 405 (445)
.|..+|..+...-+++.+++.+.|.+.+..|.
T Consensus 365 ~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 365 ESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 78899999999999999999999988877665
No 8
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.75 E-value=2.8e-18 Score=180.97 Aligned_cols=336 Identities=13% Similarity=0.115 Sum_probs=205.6
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHH
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 121 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f 121 (445)
+|=++..++........+.|++|++|++.||...+..+.+..+|..+||.+|.. .++. + .+||.++
T Consensus 147 ~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~--~~~~-~-----------~~Wr~~~ 212 (513)
T KOG0254|consen 147 VGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG--TSKV-Y-----------AGWRIPL 212 (513)
T ss_pred HHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhh--hccC-C-----------ccHHHHH
Confidence 444455556666778999999999999999999999999999999999998876 2211 0 2688888
Q ss_pred HHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccc
Q 013336 122 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 201 (445)
Q Consensus 122 ~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
.+..+..++..+. .+++||+|.+..++++.+++++.+ .+.+ |-. +.+.+.+.+.......
T Consensus 213 ~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l--------~~l~----------g~~-~~~~~~~~~~~~~~~~ 272 (513)
T KOG0254|consen 213 GLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSL--------KRLR----------GLS-PEDVEVELELLKIKLL 272 (513)
T ss_pred HHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHH--------HHHh----------CCC-CcchHHHHHHHHHHHH
Confidence 8888877777666 788999998887765533332111 0000 000 0111111100000000
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCCHHHH-HHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhh
Q 013336 202 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMH-VVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 280 (445)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~-~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~ 280 (445)
.+.+ . ...+..++++++ +.+.+... .+.+..|.++.|++.+++|.++.....-++.+ .
T Consensus 273 ~~~~-~---~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~--------~------- 331 (513)
T KOG0254|consen 273 VEAE-V---AEGKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSD--------T------- 331 (513)
T ss_pred Hhhh-c---ccccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCc--------h-------
Confidence 0000 0 001112333333 22233333 23444555666888888888875443211111 0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccc-------cc
Q 013336 281 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQA-------IK 353 (445)
Q Consensus 281 ~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-------i~ 353 (445)
.+..++.+++.++.+++...++||+|||++++.|...++++++..+.......+.........+.++.+ +.
T Consensus 332 --~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~ 409 (513)
T KOG0254|consen 332 --FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFA 409 (513)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHh
Confidence 123334456666667777899999999999999999999999877766443211100000111111111 11
Q ss_pred -eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHH-hhheeccC
Q 013336 354 -ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV-VATLKLPH 431 (445)
Q Consensus 354 -~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~-~~~~~vpe 431 (445)
...++||.+.+|.+|.+ -+++..++.....++.+.++...+..+.+..+. ...|...+..+.++.+ ++++++||
T Consensus 410 ~g~g~v~w~~~sEifp~~--~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~--~~~f~~f~~~~~~~~~~fv~~~~pE 485 (513)
T KOG0254|consen 410 IGWGPVPWVIVSEIFPLR--LRSKGASLAVAVNWLWNFLISFFFPFITEALGI--GGTFGYFGGICLLSLIIFVFFFVPE 485 (513)
T ss_pred cccccchhhhhhccCcHh--HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccc--cchHHHHHHHHHHHHHHHheEEccc
Confidence 45689999999999986 457777999999999999998777666655441 1244444444555555 88899999
Q ss_pred CCCCCcc
Q 013336 432 LSSNSFR 438 (445)
Q Consensus 432 ~~~~~~~ 438 (445)
|||||+.
T Consensus 486 Tkg~sle 492 (513)
T KOG0254|consen 486 TKGLTLE 492 (513)
T ss_pred CCCCcHH
Confidence 9999976
No 9
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.74 E-value=2.9e-18 Score=186.14 Aligned_cols=138 Identities=17% Similarity=0.128 Sum_probs=102.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
.+.++..++..++.++++||+|||++++++.++.+++++.+++.. +.+ ..+++..++|+. ....+.+++++
T Consensus 602 ~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~----s~~---~ll~~~~l~g~~~~~~~~~~~a~~a 674 (742)
T TIGR01299 602 FLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN----SES---AMIALLCLFGGLSIAAWNALDVLTV 674 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc----cHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667778889999999999999999999999888877666553 211 112222233433 34455678899
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCCc
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSF 437 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~~ 437 (445)
|++|.+ .+|+.+|+.+....++.+++|.++|.+.+.. . ..+|++++++.++++++++ ++|||+|+.+
T Consensus 675 El~Pt~--~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-~--~~pf~i~a~~lll~~ll~~-~LPET~~~~l 741 (742)
T TIGR01299 675 ELYPSD--KRATAFGFLNALCKAAAVLGILIFGSFVGIT-K--AAPILFASAALACGGLLAL-KLPDTRGQVL 741 (742)
T ss_pred HHcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-h--HHHHHHHHHHHHHHHHHHH-hCCCCccccc
Confidence 999987 5789999999999999999999998877642 1 3467788888888777664 6699999864
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.73 E-value=6.5e-18 Score=175.94 Aligned_cols=319 Identities=10% Similarity=0.022 Sum_probs=182.6
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
..++.....++..+|++|..|+++|+++.++.+....+|.++++.++... .....+... ...+||++|.+.++
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~~------~~~gWr~~f~~~~~ 202 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFI-ARSGDASWL------NTDGWRYMFASEAI 202 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hccCccccc------ccCChHHHHHHHHH
Confidence 44555667788999999999999999999999999999999998876542 110000000 01368999998877
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
+.++..+ ..+++||+|.+..++++.+++++ ..++.. +.++..+
T Consensus 203 ~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~--------~~~~~~----------------~~~~~~~------------ 245 (479)
T PRK10077 203 PALLFLM-LLYFVPETPRYLMSRGKQEQAEG--------ILRKIM----------------GNTLATQ------------ 245 (479)
T ss_pred HHHHHHH-HHHcCCCCcHHHHHcCCHHHHHH--------HHHHHc----------------CChhHHH------------
Confidence 7666654 45678998754322222111000 000000 0000000
Q ss_pred CCCCCCccchHHHHHHHhccCCHH-----HHHH----HHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHH
Q 013336 207 GSFNDGPGAVLVNLLTSLRHLPPA-----MHVV----LIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQ 277 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~~-----l~~l----~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~ 277 (445)
.....++..+.-...++. ...+ +...+.+..+++...+|.+++..+ ++.++
T Consensus 246 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~--~g~~~------------ 305 (479)
T PRK10077 246 ------ALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT--LGAST------------ 305 (479)
T ss_pred ------HHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH--cCCCC------------
Confidence 000000000000000000 0011 111222223344444455554432 22111
Q ss_pred HhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc---e
Q 013336 278 GVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK---I 354 (445)
Q Consensus 278 gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~---~ 354 (445)
..+.+..+..++..++.+++.+++.||+|||++++.+.++++++++++...... +... ........+.+++ .
T Consensus 306 --~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~--~~~~-~~~~~~~~~~~~~~~~~ 380 (479)
T PRK10077 306 --DIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT--QAPG-IVALLSMLFYVAAFAMS 380 (479)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc--Cccc-HHHHHHHHHHHHHHhcc
Confidence 011123334566777888899999999999999999999998887766544311 1110 0011111122222 2
Q ss_pred ecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccc------ccccCcchhHHHHHHHHHHHHHHhhhee
Q 013336 355 TYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD------ALFGGGNIPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 355 ~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~------~~~g~~~~~~f~~~~v~~ll~~~~~~~~ 428 (445)
..++.+++++|..|++ .+|+.+|+.+....+++++++.+++.+. +..|. ...|++.++++++++++++++
T Consensus 381 ~~~~~~~~~~e~~p~~--~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 381 WGPVCWVLLSEIFPNA--IRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHN--GFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred ccchhHHHhHhhCChh--HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccC--ccHHHHHHHHHHHHHHHHHhc
Confidence 3356689999999875 6799999999999999999876665433 34443 346788888888888888888
Q ss_pred ccCCCCCCcc
Q 013336 429 LPHLSSNSFR 438 (445)
Q Consensus 429 vpe~~~~~~~ 438 (445)
.||||+|+..
T Consensus 457 ~~e~~~~~~~ 466 (479)
T PRK10077 457 VPETKGKTLE 466 (479)
T ss_pred cccCCCCCHH
Confidence 9999998764
No 11
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.73 E-value=2.1e-20 Score=193.35 Aligned_cols=332 Identities=13% Similarity=0.124 Sum_probs=198.8
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++....+.....|+.|.+|++.|++..++.+....+|.++++.++.. +.+..+ ..+||..+.+.+
T Consensus 111 ~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~--~~~~~~----------~~~Wr~~~~~~~ 178 (451)
T PF00083_consen 111 LIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYI--VSYYSD----------NWGWRILLIFGA 178 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc--cccccc----------cccccccccccc
Confidence 34445556778999999999999999999999999999999888887754 221110 135888888888
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccccc
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 205 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
++.++.. +..+++||+|++...+++.+++++.++..+++... +++.+++.+. .
T Consensus 179 ~~~l~~~-~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~-----------------~~~~~~~~~~---------~ 231 (451)
T PF00083_consen 179 IPSLLVL-LLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIE-----------------DEEIEEIKAE---------K 231 (451)
T ss_pred ccccccc-ccccccccccceecccccccccccccccccccccc-----------------cccccccccc---------c
Confidence 7765544 45678999999998888777765554331111000 0000000000 0
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHH-HHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHH
Q 013336 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALT-WLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (445)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~-~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~ 284 (445)
++. ++.+.+++++++... ..+.+...+...+++ ..+...+..|.+....+ . +.++ . + .
T Consensus 232 ~~~--~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~-~~~~------~--~--------~ 290 (451)
T PF00083_consen 232 KES--QESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-A-GISN------S--F--------L 290 (451)
T ss_pred ccc--cccceeeeecccccc-ccccccccccccccccccccccccccccccccc-c-cccc------c--c--------c
Confidence 000 011133444444311 112222223333333 33444555555543332 1 1110 0 0 1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHH-Hhhhccccc-cCCcceeeeccc--cccc-eecchh
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTA-IISVISVRE-YSGGIEHGIGAN--QAIK-ITYSVP 359 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~-~~~~~~~~~-~~~~~~~~~~~~--~Gi~-~~~svP 359 (445)
...+.++...+..++...++||+|||++++++.++++++++.++ .......+. +..........+ .++. ...+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~ 370 (451)
T PF00083_consen 291 ATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLP 370 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccc
Confidence 11122344455566666999999999999999999888876654 111111110 001111111111 2222 456788
Q ss_pred HHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCCccc
Q 013336 360 FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFRS 439 (445)
Q Consensus 360 ~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~~~~ 439 (445)
+.+.+|.+|.+. |++..|+.+...+++.++.+.+...+.+..+. ...+.+.+++++++.+++++++||||||+...
T Consensus 371 ~~~~~ElfPt~~--R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~--~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~e 446 (451)
T PF00083_consen 371 WIYTAELFPTKV--RSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGG--WGVFLIFAGVCLIAIIFVYFFLPETKGKTLEE 446 (451)
T ss_pred cccccccccccc--cccccccccccccccccccccccccccccccc--cccchhhHHHHHHHHhheeEEEeeCCCCCHHH
Confidence 899999999874 56667999999999999999988888877663 24577777777888888889999999999764
Q ss_pred CC
Q 013336 440 SG 441 (445)
Q Consensus 440 ~~ 441 (445)
-.
T Consensus 447 i~ 448 (451)
T PF00083_consen 447 IQ 448 (451)
T ss_pred HH
Confidence 33
No 12
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.72 E-value=1.8e-17 Score=170.55 Aligned_cols=333 Identities=12% Similarity=0.115 Sum_probs=188.3
Q ss_pred HHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccc---cccchhhhhhcccchhhhccccchhH
Q 013336 43 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG---ASGSWHRWFPFLTSRACCAACGNLKA 119 (445)
Q Consensus 43 g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG---~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (445)
+-.+..++......+..+++.|..|+++|+++.++......+|.++|+.++ .. +.+ ..++|+
T Consensus 133 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~--~~~-------------~~~w~~ 197 (481)
T TIGR00879 133 GRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVS--LNN-------------TLGWRI 197 (481)
T ss_pred HHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhc--CCC-------------CccHHH
Confidence 334455556667788899999999999999999999999999999999988 33 111 136899
Q ss_pred HHHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhc-
Q 013336 120 AFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHI- 198 (445)
Q Consensus 120 ~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 198 (445)
.|.+.++..++.+ +..+++||+|.....+++.++++ +...+.+. . +....+..+....
T Consensus 198 ~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~--------~~~~~~~~-----------~-~~~~~~~~~~~~~~ 256 (481)
T TIGR00879 198 PLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRVEEAR--------KSLARLRG-----------T-SGEDKELLDELELI 256 (481)
T ss_pred HHHHHHHHHHHHH-HHHhcCCCChHHHHHcCChHHHH--------HHHHHHhC-----------C-CCCcHHHHHHHHHH
Confidence 9988666555544 34556898764322211100000 00000000 0 0000000000000
Q ss_pred cccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHH---HHHH-hhhhhhhccccccceeeecCCCCCCChhhHH
Q 013336 199 SKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMA---LTWL-SWFPFFLFDTDWMGREVYHGDPKGNDHEVKF 274 (445)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f---~~~~-g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~ 274 (445)
.+..+.+.+ ..+..++++++..+. ..+.+.+..+ +.+. +...+..|.+.+..+ ++-++
T Consensus 257 ~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~--------- 318 (481)
T TIGR00879 257 DIKRSIEKR----SVQPSWGSLFSSTRR---IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN--AGVST--------- 318 (481)
T ss_pred HHHHHHHHh----hccccHHHHHhcCch---hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH--cCCCc---------
Confidence 000000000 011123333332111 1122222222 2222 233344444444332 22221
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhcccccc---CCcceeeeccccc
Q 013336 275 YDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREY---SGGIEHGIGANQA 351 (445)
Q Consensus 275 y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~---~~~~~~~~~~~~G 351 (445)
+ .+.+......+...+.+++.+++.||+|||+++.++.++++++++...+......+.. ..+..+....+.+
T Consensus 319 -~----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (481)
T TIGR00879 319 -D----HAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFI 393 (481)
T ss_pred -h----HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHH
Confidence 1 1123334556667778888999999999999999988888887766553321110100 0001111111111
Q ss_pred --cc-eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhee
Q 013336 352 --IK-ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 352 --i~-~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~ 428 (445)
++ ....+++++++|..|++ .+|+.+|+.+....+++++++.+.+.+.+..|. ...|++.+++++++++++.++
T Consensus 394 ~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~--~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 394 AFFAMGWGPVPWVIVSEIFPLS--LRPKGISIAVAANWLANFIVGFLFPTMLESIGV--GGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHHHccccCeehhhhhccCChH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cceehhHHHHHHHHHHHHhee
Confidence 11 33456678889999875 579999999999999999999999988877664 346788888888888888888
Q ss_pred ccCCCCCCcc
Q 013336 429 LPHLSSNSFR 438 (445)
Q Consensus 429 vpe~~~~~~~ 438 (445)
.||+|+++..
T Consensus 470 ~~~~~~~~~~ 479 (481)
T TIGR00879 470 LPETKGRTLE 479 (481)
T ss_pred cccCCCCChh
Confidence 9999988753
No 13
>TIGR00898 2A0119 cation transport protein.
Probab=99.72 E-value=1.3e-17 Score=175.04 Aligned_cols=317 Identities=15% Similarity=0.159 Sum_probs=186.0
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHH
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 121 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f 121 (445)
++..+..++.........+++.|.+|+++|+++.++......+|.++++.++... .++|+.|
T Consensus 185 ~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~wr~~~ 246 (505)
T TIGR00898 185 VFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI------------------PDWRWLQ 246 (505)
T ss_pred HHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh------------------hHHHHHH
Confidence 3345566666777888999999999999999999999999999999988876541 1478888
Q ss_pred HHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccc
Q 013336 122 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 201 (445)
Q Consensus 122 ~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
++.+++.++..+.. +.+||+|.+...+++.+++.+.++. ..+.+ +.. .+.+... .+.
T Consensus 247 ~~~~i~~~~~~~~~-~~~~esp~~l~~~~~~~~a~~~l~~-----~~~~~----------~~~------~~~~~~~-~~~ 303 (505)
T TIGR00898 247 LAVSLPTFLFFLLS-WFVPESPRWLISQGRIEEALKILQR-----IAKIN----------GKK------LPAEVLS-LSL 303 (505)
T ss_pred HHHHHHHHHHHHHH-HhcCCChHHHHHCCCHHHHHHHHHH-----HHHHc----------CCC------CCHHHHh-hhh
Confidence 88877766665544 6789998765444332221110000 00000 000 0000000 000
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhH
Q 013336 202 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 281 (445)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~ 281 (445)
.+ + +.+ +.++.+++++++ . +.++...+..++.|+......+....++.+ ++.+ .|
T Consensus 304 ~~-~-~~~-~~~~~~~~~l~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------~~------ 358 (505)
T TIGR00898 304 EK-D-LSS-SKKQYSFLDLFR----T-PNLRKTTLCLMMLWFTTAFSYYGLVLDLGN--LGGN---------IY------ 358 (505)
T ss_pred hh-h-hhh-ccCCCcHHHHhC----C-hHHHHHHHHHHHHHHHHHHHHHHHhccccc--cCCC---------hH------
Confidence 00 0 000 011224444433 2 445555555555565433222222222221 1211 11
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchh
Q 013336 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVP 359 (445)
Q Consensus 282 g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP 359 (445)
+...+.+++.....++.+++.||+|||+...++.++.+++++.+.+.. +... +.......+.++. ....+.
T Consensus 359 --~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~ 431 (505)
T TIGR00898 359 --LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP----VDLY-FLRTALAVLGKFGITSAFQMV 431 (505)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC----CCch-HHHHHHHHHHHHHHHHHHHHH
Confidence 122234555666777888999999999999999888888776655543 2110 0111111122222 334566
Q ss_pred HHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCCcc
Q 013336 360 FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFR 438 (445)
Q Consensus 360 ~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~~~ 438 (445)
+++.+|..|.+ .+|+.+|+.+....++.+++|.+.+ +.+. +. ...+.+.+++++++++++ +++|||++|...
T Consensus 432 ~~~~~e~~p~~--~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-~~--~~~~~~~~~~~~~~~~~~-~~lpet~~~~l~ 503 (505)
T TIGR00898 432 YLYTAELYPTV--VRNLGVGVCSTMARVGSIISPFLVY-LGEK-WL--FLPLVLFGGLALLAGILT-LFLPETKGVPLP 503 (505)
T ss_pred HHHhcccccHH--HHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-HH--hhHHHHHHHHHHHHHHHH-HcCcCCCCCCCC
Confidence 78889999986 5678889999999999999999888 4332 22 245677777777777755 578999998764
No 14
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.71 E-value=1.7e-16 Score=161.92 Aligned_cols=303 Identities=14% Similarity=0.150 Sum_probs=201.8
Q ss_pred hchhhHHhhhcCCcccccccCCCcceehhhHH-------------------------HHHHHHhccccccchhhHHHHhc
Q 013336 10 GFSADIGYILGDTKEHCSKFRGTRTRAAFVFV-------------------------IGFWLLDLANNTVQGPARALLAD 64 (445)
Q Consensus 10 ~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~~v-------------------------~g~~lld~s~n~~~~p~~A~i~D 64 (445)
++.+++-..+.|+| ++|+||+|||.++.++ +-+.+++++..+...|.-|+.++
T Consensus 62 Ai~DP~~G~i~D~t--~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~ 139 (467)
T COG2211 62 AITDPIMGFIVDRT--RSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPE 139 (467)
T ss_pred HHhcchheeeeccc--ccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchh
Confidence 55666767788998 5999999999775422 33344555555677899999999
Q ss_pred CCC-ccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeeccC
Q 013336 65 LSG-PDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVP 143 (445)
Q Consensus 65 ~~p-~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p 143 (445)
+++ ++||.+..+|-..+..+|+.+...+-.. +.+.++ ++ .....++..-.+.++..++.++++.+.+||++
T Consensus 140 iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~p--lv~~~g---~~---~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~ 211 (467)
T COG2211 140 ITQDPQERASLTSWRMVFASLGGLLVAVLFPP--LVKLFG---GG---DKALGYQGTALVLGVIGVILLLFCFFNVKERV 211 (467)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhC---CC---cchhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 997 6999999999999999997775543322 111211 11 00225566666666666777777778899986
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccchHHHHHHH
Q 013336 144 LTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTS 223 (445)
Q Consensus 144 ~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (445)
....+.++ ..+.++++.+..
T Consensus 212 ~~~~~~~~------------------------------------------------------------~~~~~~~~~~~~ 231 (467)
T COG2211 212 VETQPTKT------------------------------------------------------------GVKLKLKDSFLL 231 (467)
T ss_pred CccccCcc------------------------------------------------------------cccccHHHHHHH
Confidence 42211100 012334544444
Q ss_pred hccCCHHHHHHHHHHHHHHHhhh---hhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhh
Q 013336 224 LRHLPPAMHVVLIVMALTWLSWF---PFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLI 300 (445)
Q Consensus 224 ~~~~P~~l~~l~l~~f~~~~g~~---~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~ 300 (445)
++++ |+++.+|+..++.+.+.. +++.|+..|+ - ++++ ......+...+....++.++.
T Consensus 232 ~~~N-rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~----l-g~~~-------------l~~~~~~~~~~~~~l~~~~~~ 292 (467)
T COG2211 232 IFKN-RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV----L-GDPE-------------LFAYLLLLASGAGLLIGLILW 292 (467)
T ss_pred HHcc-chHHHHHHHHHHHHHHHHHHhhhhheeEEEE----c-CChH-------------HHHHHHHHHHHHHHHHHHHhH
Confidence 4443 678888888888888766 3444444332 1 1211 122234444455555668899
Q ss_pred hhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC-----CCC
Q 013336 301 EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS-----GGG 373 (445)
Q Consensus 301 ~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~-----~~~ 373 (445)
+++.+|+|+|+++.++.++.+++.+++.+.. . +... ..+++..+.+++ ..+.+||+++++..+.+ .|.
T Consensus 293 p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~--~-~~~~--l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~ 367 (467)
T COG2211 293 PRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP--A-GSVV--LIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRR 367 (467)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHhhc--C-cchH--HHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCc
Confidence 9999999999999999999988887776665 1 2110 122222333333 78899999999988743 467
Q ss_pred cccchhHHHHHHHHHHHHhhhccccccccccCc
Q 013336 374 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG 406 (445)
Q Consensus 374 ~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~ 406 (445)
.|...|+++.+.=+++.++..+.|.+.+..|+.
T Consensus 368 eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 368 EGIVYSGMTFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 899999999999999999999888887777654
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.71 E-value=8.2e-17 Score=164.07 Aligned_cols=288 Identities=16% Similarity=0.065 Sum_probs=179.1
Q ss_pred HHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHH
Q 013336 43 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 122 (445)
Q Consensus 43 g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 122 (445)
+..+..++.....++..+++.|..|+++|++++++......+|..+++.++.. +.+ ..+++..|+
T Consensus 109 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--~~~-------------~~~~~~~~~ 173 (406)
T PRK11551 109 ARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVL--AAG-------------DAAWRHIFY 173 (406)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hcc-------------ccCHHHHHH
Confidence 33455666666777889999999999999999999999999999999988754 221 125888888
Q ss_pred HHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccc
Q 013336 123 VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKA 202 (445)
Q Consensus 123 i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (445)
+.+++.++..++....+||+|.+..++++.
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------------------------------------------------- 203 (406)
T PRK11551 174 VGGVGPLLLVPLLMRWLPESRAFAQAAGAG-------------------------------------------------- 203 (406)
T ss_pred HHHHHHHHHHHHHHHhCCCChhHHhccCcc--------------------------------------------------
Confidence 877665555555556678875322111000
Q ss_pred cccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHH
Q 013336 203 EDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREG 282 (445)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g 282 (445)
+ +.+...+..++.. . .+..+.+++..++.....+.+..|.+.|+.+ .+.++. + .+
T Consensus 204 ----~----~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~---------~----~~ 258 (406)
T PRK11551 204 ----K----QRAPVLRALFGEG-R-ATATLLLWISYFFTLIVLYFLLNWLPSLLVG--QGLSRS---------Q----AG 258 (406)
T ss_pred ----h----hhhhhHHHHhhhh-h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCChh---------h----hh
Confidence 0 0000111111110 1 1122334444455455555555566666554 222211 1 11
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhH
Q 013336 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPF 360 (445)
Q Consensus 283 ~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~ 360 (445)
.....+++...+.+++.+++.||+|+|+.+..+.+..+++++...+.. +.+ ...+...+.|+. ...++.+
T Consensus 259 -~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~~~ 330 (406)
T PRK11551 259 -LVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP----SFA---GMLLAGFAAGLFVVGGQSVLY 330 (406)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC----cHH---HHHHHHHHHHHHHHhHHHHHH
Confidence 233455667778899999999999999998876666655544333222 211 111122234433 3455667
Q ss_pred HHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 361 AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 361 aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
+++.+..|++ .+|+.+|+.+....++..+++.++|.+.+..+.. ...+.....+.+++.+++.+.+++
T Consensus 331 ~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 398 (406)
T PRK11551 331 ALAPLFYPTQ--VRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRST-VGVIGASIPVILVAALAALLLVSR 398 (406)
T ss_pred HHHHHHcchh--hhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCch-HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8899999886 5799999999999999999999999998875543 345666666666666666554443
No 16
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.71 E-value=1.3e-16 Score=159.73 Aligned_cols=304 Identities=13% Similarity=0.039 Sum_probs=180.7
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHH
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 124 (445)
.+..++.....++..+++.|..|+++|++++++...+.++|.++|+.+++. +.+. .++|+.|.+.
T Consensus 90 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--l~~~-------------~~~~~~~~~~ 154 (399)
T TIGR00893 90 VLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGW--ILIH-------------FSWQWAFIIE 154 (399)
T ss_pred HHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHH--HHHh-------------CCchHHHHHH
Confidence 455566666778899999999999999999999999999999999988875 1111 2588899887
Q ss_pred HHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccc
Q 013336 125 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (445)
Q Consensus 125 ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
+++.++..++..+..||+|..+....+ ++++ ...++. .++ .+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~-------------------~~~---------~~- 196 (399)
T TIGR00893 155 GVLGIIWGVLWLKFIPDPPQKAKWLTE--EEKY-------IVVGGL-------------------LAE---------QQ- 196 (399)
T ss_pred HHHHHHHHHHhhheecCCCCccccCCH--HHHh-------hcchhh-------------------ccc---------cc-
Confidence 777666666666677776532211100 0000 000000 000 00
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHH
Q 013336 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (445)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~ 284 (445)
+ +.+++..+...++.++ .+.++.+++..++.+.+...+..|.+.|+.+ .++.++. + .+ +
T Consensus 197 ~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~----~~-~ 255 (399)
T TIGR00893 197 G-KGPSTPKKYQIKELLK-----DRRVWGLALGQFLVNIGLGFFLTWFPTYLVQ-ERGLSIL---------E----AG-F 255 (399)
T ss_pred c-ccccCCCccchHHHhc-----CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhcccHH---------H----hh-H
Confidence 0 0000011222333332 2556777778888888888888888887765 2332210 1 11 2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
.....++...+.+++.+++.||++||+... .......++.+...+..... +.............++.. ......++
T Consensus 256 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (399)
T TIGR00893 256 MASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFAT-NYVNIPYAALALVALGFFGLGAGAIGWA 334 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHhchhhhhHHHH
Confidence 333556677788899999999999996211 11111111111111111000 100000011111112211 23566688
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhh
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 426 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~ 426 (445)
++.|..|++ .+|+.+|+.+....+++.+++.+.|.+.+..|.. ...|.+.+++.+++.+...
T Consensus 335 ~~~~~~~~~--~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~-~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 335 LISDNAPGN--IAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSF-AGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHhhcChh--HHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCch-hHHHHHHHHHHHHHHHHHH
Confidence 899999875 6799999999999999999999999999887732 3567778877777766554
No 17
>PRK09669 putative symporter YagG; Provisional
Probab=99.71 E-value=8.7e-17 Score=166.48 Aligned_cols=305 Identities=11% Similarity=0.046 Sum_probs=184.4
Q ss_pred ehhHhhchhhHHhhhcCCcccccccCCCcceehhhHH-------H------------------HHHHHhccccccchhhH
Q 013336 5 AVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFV-------I------------------GFWLLDLANNTVQGPAR 59 (445)
Q Consensus 5 ~l~~l~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~~v-------~------------------g~~lld~s~n~~~~p~~ 59 (445)
+-+.=+.++++...++|++ ++|+||||||.++.++ + ...+++.+......|..
T Consensus 54 ~~i~dai~dp~~G~lsD~~--~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~ 131 (444)
T PRK09669 54 VRVLDAVTDPLMGALVDRT--RTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYC 131 (444)
T ss_pred HHHHHHcccceeeEeeecC--CCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHH
Confidence 3445567777888889998 5899999999863211 1 11122334445678899
Q ss_pred HHHhcCC-CccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeE
Q 013336 60 ALLADLS-GPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYF 138 (445)
Q Consensus 60 A~i~D~~-p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~ 138 (445)
|+.+|.+ +++||++.+++......+|..++..++.. +...++ .. .....++..+.+.+++.+++.+++++.
T Consensus 132 al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~p--l~~~~~---~~---~~~~g~~~~~~i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 132 AMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALP--LVDILG---KG---DEQKGYFYAMMVMGLLGVVLFFCCFFM 203 (444)
T ss_pred HhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhC---CC---chhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999 56889999999999999998888765432 111111 00 001245666766666666666666666
Q ss_pred eeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccchHH
Q 013336 139 ADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLV 218 (445)
Q Consensus 139 v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (445)
.||++..+ ++ + +.+.+
T Consensus 204 ~~e~~~~~-~~-~--------------------------------------------------------------~~~~~ 219 (444)
T PRK09669 204 TKERYTPE-VD-N--------------------------------------------------------------SSSVW 219 (444)
T ss_pred eEEecCCC-Cc-C--------------------------------------------------------------CCCHH
Confidence 78753211 00 0 01122
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhh
Q 013336 219 NLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSF 298 (445)
Q Consensus 219 ~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~ 298 (445)
+-++.+.+. |+++.+++..++.+.+......+..+|+.. ..+ ++ + .+...+....+.+++...
T Consensus 220 ~~~~~~~~n-~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~-~~~-~~----------~----~~~~~~~~~~i~~ii~~~ 282 (444)
T PRK09669 220 KDLKLLLGN-SQWRIMFIFNVVLLTAVVTRGGATLYYVNY-VLL-RP----------D----LATLFLVTGMIAGLFGAL 282 (444)
T ss_pred HHHHHHhCC-chHHHHHHHHHHHHHHHHHHhhhhheeeee-ecC-CH----------H----HHHHHHHHHHHHHHHHHH
Confidence 222333332 557777777777666654333333333322 221 21 1 111222233445556667
Q ss_pred hhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC-----C
Q 013336 299 LIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS-----G 371 (445)
Q Consensus 299 i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~-----~ 371 (445)
+.+++.||+|+|+.+..+.++.+++.+...+.. . +... ...+...+.|++ ....++++++++..+.+ +
T Consensus 283 ~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~--~-~~~~--~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~ 357 (444)
T PRK09669 283 LSERLLGKFDRVRAFKWTIVAFVILSALIFFIP--P-SNVW--LIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGR 357 (444)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC--c-chHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCc
Confidence 788999999999999988776655433322221 1 2110 122223345555 56688899999888632 2
Q ss_pred CCcccchhHHHHHHHHHHHHhhhccccccccccC
Q 013336 372 GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 405 (445)
Q Consensus 372 ~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~ 405 (445)
|..|..+|+.+.+..+++.+++.+.|.+.+..|.
T Consensus 358 r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 358 RLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4568889999999999999999999988887765
No 18
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.66 E-value=9.4e-16 Score=157.21 Aligned_cols=282 Identities=13% Similarity=0.038 Sum_probs=175.4
Q ss_pred ccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHH
Q 013336 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (445)
Q Consensus 53 ~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~ 132 (445)
...++..+++.|.+|+++|++++++.....++|..+|+.+++.+ .+. .++++.|.+.++..+++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l--~~~-------------~~~~~~~~~~~~~~~~~~ 190 (417)
T PRK10489 126 LGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL--IAA-------------GGVAWNYGLAAAGTFITL 190 (417)
T ss_pred HHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH--HHH-------------HhhHHHHHHHHHHHHHHH
Confidence 34466788999999999999999999999999999999998862 211 146777877766655554
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCC
Q 013336 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (445)
Q Consensus 133 ~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (445)
++ ++.+||.+.+..+++ +
T Consensus 191 ~~-~~~l~~~~~~~~~~~-------------------------------------------------------------~ 208 (417)
T PRK10489 191 LP-LLRLPALPPPPQPRE-------------------------------------------------------------H 208 (417)
T ss_pred HH-HHhCCCCCCCCcccc-------------------------------------------------------------c
Confidence 43 345666432110000 0
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHH
Q 013336 213 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 292 (445)
Q Consensus 213 ~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~ 292 (445)
.....++-++..++.| .++.+.+..++. .....+..+.+.|+.+ .++.++. . .| +.+..+++.
T Consensus 209 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~p~~~~~-~~g~~~~---------~----~g-~~~~~~~~g 271 (417)
T PRK10489 209 PLRSLLAGFRFLLASP-VVGGIALLGGLL-TMASAVRVLYPALADE-VWQMGAA---------Q----IG-LLYAAVPLG 271 (417)
T ss_pred chHHHHHHHHHHHcCh-HHHHHHHHHHHH-HHHHhHHHhhHHHHHh-ccCCChh---------H----hH-HHHHHHHHH
Confidence 0011222222333323 344444333332 2223445556666654 3443321 1 12 333345666
Q ss_pred HHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC
Q 013336 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS 370 (445)
Q Consensus 293 ~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~ 370 (445)
..+.+++.+++.||.++++....+.++.+++++...+.. +.+ ...+...+.|++ ......++++.+..|++
T Consensus 272 ~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 344 (417)
T PRK10489 272 AALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP----MWI---LAVLCLALFGYLSAISSLLQYTLLQTQTPDE 344 (417)
T ss_pred HHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc----hHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH
Confidence 777788899999998777777777777666654433222 211 111223334444 33344567888888875
Q ss_pred CCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCCccc
Q 013336 371 GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFRS 439 (445)
Q Consensus 371 ~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~~~~ 439 (445)
.+|+.+|+.+....+++.+++.+.|.+.+..|.. ..+...+++.++.++++...+||+|+++...
T Consensus 345 --~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (417)
T PRK10489 345 --MLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPV--ASASASGFGLLIIGVLLLLVLGELRRFRQTP 409 (417)
T ss_pred --HHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchh--hHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 5799999999999999999999999999988753 4566666666666666767889999987643
No 19
>PRK11462 putative transporter; Provisional
Probab=99.66 E-value=2.1e-15 Score=157.01 Aligned_cols=296 Identities=14% Similarity=0.098 Sum_probs=178.1
Q ss_pred hchhhHHhhhcCCcccccccCCCcceehhhHH-------------------------HHHHHHhccccccchhhHHHHhc
Q 013336 10 GFSADIGYILGDTKEHCSKFRGTRTRAAFVFV-------------------------IGFWLLDLANNTVQGPARALLAD 64 (445)
Q Consensus 10 ~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~~v-------------------------~g~~lld~s~n~~~~p~~A~i~D 64 (445)
+.++++-..++|++ ++|+||||||.++.++ +...+++.+......|..|+.+|
T Consensus 59 ai~Dp~~G~~~D~t--~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~ 136 (460)
T PRK11462 59 AISDPCMGLLADRT--RSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGV 136 (460)
T ss_pred HHHhhhheehhccC--CCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 56777777889999 5899999999764321 12222344445567899999999
Q ss_pred CCC-ccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeeccC
Q 013336 65 LSG-PDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVP 143 (445)
Q Consensus 65 ~~p-~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p 143 (445)
.++ ++||.+..++.+....+|..+++.+... +-+.++ +. .....++....+.+++.+++..+.....||++
T Consensus 137 lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~p--lv~~~g---~~---~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~ 208 (460)
T PRK11462 137 ITNDPTQRISLQSWRFVLATAGGMLSTVLMMP--LVNLIG---GD---NKPLGFQGGIAVLSVVAFMMLAFCFFTTKERV 208 (460)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhC---CC---chhhhHHHHHHHHHHHHHHHHHHHHhcceecc
Confidence 998 6999999999999999988888766432 111111 00 00113455555666666666665555667753
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccchHHHHHHH
Q 013336 144 LTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTS 223 (445)
Q Consensus 144 ~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (445)
..+ ++ +.++++.++.
T Consensus 209 ~~~--~~---------------------------------------------------------------~~~~~~~l~~ 223 (460)
T PRK11462 209 EAP--PT---------------------------------------------------------------TTSMREDLRD 223 (460)
T ss_pred CCC--cc---------------------------------------------------------------CCCHHHHHHH
Confidence 211 00 0123444444
Q ss_pred hccCCHHHHHHHHHHHHHHHhhh---hhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhh
Q 013336 224 LRHLPPAMHVVLIVMALTWLSWF---PFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLI 300 (445)
Q Consensus 224 ~~~~P~~l~~l~l~~f~~~~g~~---~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~ 300 (445)
..+ .|+++.++...++.+.+.. +...|+..|+ + +++ + .....+..+.+.+++...+.
T Consensus 224 ~~~-Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~----~-g~~----------~----~~~~~l~~~~i~~iig~~l~ 283 (460)
T PRK11462 224 IWQ-NDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI----L-GTP----------E----VFVAFLTTYCVGNLIGSALA 283 (460)
T ss_pred HhC-ChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh----c-CCh----------H----HHHHHHHHHHHHHHHHHHHH
Confidence 444 3667777666555555432 3333433332 2 221 1 11123445667777788889
Q ss_pred hhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC-----CCC
Q 013336 301 EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS-----GGG 373 (445)
Q Consensus 301 ~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~-----~~~ 373 (445)
+++.||+++|+++..+.++.++......+.... +.. ...+...+.|++ ....++++++++..+.. .|+
T Consensus 284 ~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~ 358 (460)
T PRK11462 284 KPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQ--ASI---TMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRL 358 (460)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHhchh--HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCc
Confidence 999999999998775544443322222222100 111 111122234444 45677788888877632 356
Q ss_pred cccchhHHHHHHHHHHHHhhhccccccccccC
Q 013336 374 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 405 (445)
Q Consensus 374 ~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~ 405 (445)
.|..++..+.+.-+++.+++.+.|.+.+..|.
T Consensus 359 ~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 359 TGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 68888999999999999999988887766554
No 20
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.65 E-value=1.8e-15 Score=153.85 Aligned_cols=276 Identities=14% Similarity=0.071 Sum_probs=168.4
Q ss_pred ccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHH
Q 013336 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (445)
Q Consensus 53 ~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~ 132 (445)
....+..+++.|..|+++|++++++......+|..+|+.+++. +.+. .+++..|.+.+++.+++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--l~~~-------------~~~~~~~~~~~~~~~~~~ 186 (408)
T PRK09874 122 GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGL--LADS-------------YGLRPVFFITASVLFLCF 186 (408)
T ss_pred hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHH--HHHH-------------hCHHHHHHHHHHHHHHHH
Confidence 3456678899999999999999999999999999999988876 2211 257888888777666666
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCC
Q 013336 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (445)
Q Consensus 133 ~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (445)
++..+.+||++... ++++
T Consensus 187 ~~~~~~~~~~~~~~-~~~~------------------------------------------------------------- 204 (408)
T PRK09874 187 LVTLFCIRENFQPV-SKKE------------------------------------------------------------- 204 (408)
T ss_pred HHHHHHhccCcccc-cchh-------------------------------------------------------------
Confidence 65656667753111 1000
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHH
Q 013336 213 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 292 (445)
Q Consensus 213 ~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~ 292 (445)
+...++.++.++ .|+.++.++...+....+...+..+.+.|+.+ ..+ +.. ...+. .| ....++++.
T Consensus 205 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~-----~~~~~----~g-~~~~~~~l~ 270 (408)
T PRK09874 205 -MLHMREVVTSLK-NPKLVLSLFVTTLIIQVATGSIAPILTLYVRE-LAG-NVS-----NIAFI----SG-MIASVPGVA 270 (408)
T ss_pred -hhHHHHHHHhCc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-cch-----HHHHH----HH-HHHHHHHHH
Confidence 001222333332 24444444433333333333333444444433 211 110 01111 11 112234556
Q ss_pred HHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC
Q 013336 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS 370 (445)
Q Consensus 293 ~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~ 370 (445)
..+...+.+++.||+|||+....+.+..+++++...+.. +.+ ...+...+.|++ ...+.-.+++.+..|++
T Consensus 271 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (408)
T PRK09874 271 ALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ----TPL---QLGILRFLLGAADGALLPAVQTLLVYNSSNQ 343 (408)
T ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHhhhHhhHHHHHHHHHHhCCcc
Confidence 667777889999999999999888777666554433322 211 112222334544 22222234455555553
Q ss_pred CCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 371 GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 371 ~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
.+|+.+|+.+....+++.+++.+.|.+.+..|. ...|++.++++++++++.++..+
T Consensus 344 --~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~--~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 344 --IAGRIFSYNQSFRDIGNVTGPLMGAAISANYGF--RAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred --cceeeehHHHHHHHHHHHhhHHHHHHHHhhcch--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999888774 46788888888888887765443
No 21
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.65 E-value=2e-15 Score=151.56 Aligned_cols=270 Identities=12% Similarity=0.071 Sum_probs=164.4
Q ss_pred cccchhhHHHHhcCCCccchhhH--HHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHH
Q 013336 52 NTVQGPARALLADLSGPDQRNSA--NAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (445)
Q Consensus 52 n~~~~p~~A~i~D~~p~~qr~~a--~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~ 129 (445)
+...+...+++.|..|+++|+++ +++.....++|.++|+.+++. +.+. .++|+.|++.+++.+
T Consensus 102 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~--l~~~-------------~~~~~~f~~~~~~~~ 166 (375)
T TIGR00899 102 STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFW--LALG-------------FGFTVMFLTAALAFV 166 (375)
T ss_pred hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHH--HHHh-------------cccHHHHHHHHHHHH
Confidence 34445567888898888777755 677777888999999988876 2221 258899999888777
Q ss_pred HHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCC
Q 013336 130 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 209 (445)
Q Consensus 130 i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (445)
++.++.++.+||+|.+..++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------------- 188 (375)
T TIGR00899 167 LCGVLVWLFLPSYPRGAPGALT---------------------------------------------------------- 188 (375)
T ss_pred HHHHHHHHhCCCcccCcccccC----------------------------------------------------------
Confidence 7666666668886532111000
Q ss_pred CCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHH
Q 013336 210 NDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 289 (445)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~ 289 (445)
....++.+ + .+.++.+....++.+.+...+..+.+.|+.+ .++.++. +.| +.....
T Consensus 189 ----~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---------~~g-----~~~~~~ 244 (375)
T TIGR00899 189 ----RLEVRGLL----A-SRDTRLLFVACTLMWGCNILYIINMPLLIIH-ELGLPDK---------LAG-----LMMGTA 244 (375)
T ss_pred ----cchhhhhh----c-CcchHHHHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCHH---------HHH-----HHHHHH
Confidence 00011111 1 2344555555555555544444455555443 2333210 111 122233
Q ss_pred HHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhh
Q 013336 290 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELT 367 (445)
Q Consensus 290 ~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~ 367 (445)
.+...+..++.+++.||+|+|++..++.+...++++...+.. +.+ .......+.|+. ....+.++.+.|..
T Consensus 245 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~g~~~~~~~~~~~~~~ 317 (375)
T TIGR00899 245 AGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN----SLW---ALLMLQLLNAIFIGILAGIGMLYFQDLM 317 (375)
T ss_pred HHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH----HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344555677889999999999998887766555444333222 221 111122233433 33344556677777
Q ss_pred ccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 368 ADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 368 ~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
|+ ++|..+|+.+....+++.+++.+.|.+.+..|. ...|.+.+++++++.++. .++||
T Consensus 318 ~~---~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~--~~~~~~~~~~~~~~~~~~-~~~~~ 375 (375)
T TIGR00899 318 PG---RAGAATTLYTNTGRVGWIIAGSVGGILAERWSY--HAVYWFAIVMLIVALFCL-LLIKD 375 (375)
T ss_pred cc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHHHHHHH-heecC
Confidence 65 357889999999999999999999998887774 357888888888877755 45554
No 22
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.65 E-value=3.3e-15 Score=149.60 Aligned_cols=281 Identities=17% Similarity=0.135 Sum_probs=204.3
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHH
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 121 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f 121 (445)
++=++..++.....+-.-++.+|++||+||+++.++......++.++|..+|.+ ..+++ .||..|
T Consensus 106 ~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~--ig~~~-------------GWR~~F 170 (394)
T COG2814 106 LARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF--LGQLF-------------GWRATF 170 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH--HHHHh-------------hHHHHH
Confidence 444556666667888899999999999999999999999999999999999987 55554 589999
Q ss_pred HHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccc
Q 013336 122 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 201 (445)
Q Consensus 122 ~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
.+.+.+.+++++.....+| |....++
T Consensus 171 ~~ia~l~ll~~~~~~~~lP--~~~~~~~---------------------------------------------------- 196 (394)
T COG2814 171 LAIAVLALLALLLLWKLLP--PSEISGS---------------------------------------------------- 196 (394)
T ss_pred HHHHHHHHHHHHHHHHhCC--CccCCCC----------------------------------------------------
Confidence 9999888888888888888 2111110
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhH
Q 013336 202 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 281 (445)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~ 281 (445)
++.++++.++-+++ | .++...++.++...|.|..+.|...|+.| +.+-++ + .
T Consensus 197 -----------~~~~~~~~~~~l~~-p-~v~~~l~~t~l~~~g~F~~ftYi~P~L~~-v~g~s~-----------~---~ 248 (394)
T COG2814 197 -----------LPGPLRTLLRLLRR-P-GVLLGLLATFLFMTGHFALYTYIRPFLES-VAGFSV-----------S---A 248 (394)
T ss_pred -----------CCcchhHHHHHhcC-c-hHHHHHHHHHHHHcchhhhHHhHHHHHHH-ccCCCH-----------h---H
Confidence 11223444444443 4 45566678888888999999999998887 555442 1 2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccceecchhHH
Q 013336 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKITYSVPFA 361 (445)
Q Consensus 282 g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~svP~a 361 (445)
-++.++.|++..++.+.+.+++.|| +.|+......+++++.++...+.. +... ..++...+.|+. ....+..
T Consensus 249 vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~----~~~~--~~~~~~~~wg~a-~~~~~~~ 320 (394)
T COG2814 249 VSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG----ASPA--LALALLFLWGFA-FSPALQG 320 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc----chHH--HHHHHHHHHHHH-hhhhhhH
Confidence 3478889999999999999999999 888888888888887776654443 2110 122222223333 2334445
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheec
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 429 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~v 429 (445)
+..+..+..+++.+..+++++.+.+++..+++.++|.+.+..|. ....++++++.+++.+++....
T Consensus 321 ~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~--~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 321 LQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGY--AATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhch--HHHHHHHHHHHHHHHHHHHHHH
Confidence 55555553334678889999999999999999999999999775 3578899999888888775433
No 23
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.65 E-value=1.7e-15 Score=156.48 Aligned_cols=304 Identities=12% Similarity=0.047 Sum_probs=171.3
Q ss_pred hccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHH
Q 013336 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (445)
Q Consensus 48 d~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~ 127 (445)
.++.....++..+++.|..|+++|+++.++.....++|.++|+.+++. +.+. .++|+.|++.+++
T Consensus 122 g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~--l~~~-------------~gw~~~f~~~~i~ 186 (434)
T PRK11663 122 AFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGA--IALH-------------YGWRYGMMIAGII 186 (434)
T ss_pred HHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHc-------------ccHHHHHHHHHHH
Confidence 334444557788999999999999999999999999999999987765 2111 2689999887765
Q ss_pred HHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCC
Q 013336 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (445)
Q Consensus 128 ~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (445)
.++..++..+.+||+|.+...+...++. + + .++ . .. +
T Consensus 187 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----~---~-~~~-------------------------~-----~~----~ 223 (434)
T PRK11663 187 AIVVGLFLCWRLRDKPQAMGLPSVGEWR-----H---D-ALE-------------------------L-----AQ----Q 223 (434)
T ss_pred HHHHHHHHHHHcCCCHhhcCCCCccccc-----c---c-ccc-------------------------c-----ch----h
Confidence 5544444455678876432111000000 0 0 000 0 00 0
Q ss_pred CCCCCccchHHHHHHH-hccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH
Q 013336 208 SFNDGPGAVLVNLLTS-LRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (445)
Q Consensus 208 ~~~~~~~~~~~~~~~~-~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l 286 (445)
. +....+.++.++. ..+. +.++.+.+..++.......+..+.+.|+.+ .++-++. .....+
T Consensus 224 ~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~--------------~a~~~~ 285 (434)
T PRK11663 224 Q--EGAGLSRKEILTKYVLLN-PYIWLLSFSYVLVYVVRAAINDWGNLYMSE-TLGVDLV--------------TANSAV 285 (434)
T ss_pred c--cccCCChhhhHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCCHH--------------HHHHHH
Confidence 0 0001122332221 1222 334444444554444445556666777654 2333321 111333
Q ss_pred HHHHHHHHHHhhhhhhhhhhc--Cchhh-HHHHHHHHHHHHHHHHHhhhccccccCCcceeeecccccccee--cchhHH
Q 013336 287 LLNSVVLGVSSFLIEPMCRWI--GSRLV-WAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKIT--YSVPFA 361 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~--g~r~l-~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~--~svP~a 361 (445)
..+.+...+..++.+++.||+ ++|+. .....+...++..+...... +... ........+|+... ..+...
T Consensus 286 ~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~g~~~~~~~~~~~~ 360 (434)
T PRK11663 286 SMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF---ASYV--MQAACFFTIGFFVFGPQMLIGM 360 (434)
T ss_pred HHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc---ccHH--HHHHHHHHHHHHHhhHHHHHHH
Confidence 455667788899999999998 33332 22221112211112111211 1110 01111111232211 112234
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNS 436 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~ 436 (445)
.++|+.|++ .+|+.+|+.|++.++++.++|...|.+.+..|. ..+|++.+++++++++.+.++.++.+++.
T Consensus 361 ~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (434)
T PRK11663 361 AAAECSHKE--AAGAATGFVGLFAYLGAALSGYPLAKVLEIWHW--TGFFVVISIAAGISALLLLPFLNAQAPRE 431 (434)
T ss_pred HHHhcccHh--hHHhHHHHHHHHHHHHHHHhcccHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHHHhhhchhc
Confidence 456777664 679999999999999999999999999998874 35788888888888887777777777765
No 24
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.64 E-value=2.6e-15 Score=157.65 Aligned_cols=317 Identities=12% Similarity=0.035 Sum_probs=182.0
Q ss_pred hhhHHhhhcCCcccccccCCCcceehhh---HHHH-------------------HHHHhccccccchhhHHHHhcCCCcc
Q 013336 12 SADIGYILGDTKEHCSKFRGTRTRAAFV---FVIG-------------------FWLLDLANNTVQGPARALLADLSGPD 69 (445)
Q Consensus 12 ~~~ig~~l~d~~~~~~~~~~~~~~~i~~---~v~g-------------------~~lld~s~n~~~~p~~A~i~D~~p~~ 69 (445)
.+.+-.-+.|+-. ++|++|||+|.++. ..++ ..+..++.+....+..+++.|.+|++
T Consensus 61 ~~~l~gpl~Dr~~-~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 61 FKFLWSPLMDRYT-PPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHccc-ccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 4455555788722 46778888876421 1111 11223444456677899999999999
Q ss_pred chhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeeccCCCCCCC
Q 013336 70 QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQP 149 (445)
Q Consensus 70 qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~ 149 (445)
+|++++++......+|.++|..++.. +.+. ...+|..|++.+++.+++.+..+ .+||++... ++
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~--l~~~------------~~GWr~~f~i~a~l~ll~~l~~~-~~~e~~~~~-~~ 203 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALW--LADR------------YLGWQGMYWLMAALLIPCIIATL-LAPEPTDTI-PV 203 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH--HHhc------------ccCHHHHHHHHHHHHHHHHHHHH-hcCCCcccc-cc
Confidence 99999999999999999999877765 2110 02689999998877766655444 478864211 00
Q ss_pred CCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccchHHHHHHHhccCCH
Q 013336 150 NHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPP 229 (445)
Q Consensus 150 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 229 (445)
++ . . + +....+++++++ .|+
T Consensus 204 ~~---~---------------------------------------------~-----~---~~~~~~l~~~~~----~~~ 223 (491)
T PRK11010 204 PK---T---------------------------------------------L-----E---QAVVAPLRDFFG----RNN 223 (491)
T ss_pred cc---c---------------------------------------------h-----h---hhHHHHHHHHHc----CcC
Confidence 00 0 0 0 000123344332 233
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCc
Q 013336 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (445)
Q Consensus 230 ~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~ 309 (445)
.+.+.+..++..++......+.+.|+.+ .++-++. + .|........+...+.+++.+++.||+|+
T Consensus 224 -~~~~ll~~~l~~~~~~~~~~~~~~~l~~-~~G~s~~---------~----~g~~~~~~g~i~~iiG~ll~G~L~dr~g~ 288 (491)
T PRK11010 224 -AWLILLLIVLYKLGDAFAMSLTTTFLIR-GVGFDAG---------E----VGLVNKTLGLLATIVGALYGGILMQRLSL 288 (491)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH---------H----HHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 3333333343334433333344445433 2332310 1 22111112224555678889999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccc--cceecchhHHHhhhhhccCCCCcccchhHHHHHHHH
Q 013336 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQA--IKITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 387 (445)
Q Consensus 310 r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--i~~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l 387 (445)
|+...++.+..+++.+..........+.+ .......+.. .+.....-+++..++.+++ ..|+++|+.|+...+
T Consensus 289 ~~~l~i~~~l~~l~~l~~~~l~~~~~~~~---~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~--~~~t~~gl~~s~~~l 363 (491)
T PRK11010 289 FRALMIFGILQGVSNAGYWLLSITDKNLY---SMGAAVFFENLCGGMGTAAFVALLMTLCNKS--FSATQFALLSALSAV 363 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CcHHHHHHHHHHHHH
Confidence 98877665555544332222211110111 0110111111 1122233367777888775 468999999999999
Q ss_pred HHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhe
Q 013336 388 PQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 427 (445)
Q Consensus 388 ~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~ 427 (445)
+.++++.+.|.+.+..|. ...|.+.+++++++.++..+
T Consensus 364 g~~~~~~~~G~l~~~~G~--~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 364 GRVYVGPVAGWFVEAHGW--PTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHH
Confidence 999999899999998874 35688888888887776653
No 25
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.64 E-value=2.9e-15 Score=157.20 Aligned_cols=309 Identities=10% Similarity=0.061 Sum_probs=167.7
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++.....++..+++.|..|+++|+++.++......+|..+|..++.. ....++ .. ......||++|++.+
T Consensus 127 l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~--~~~~~~---~~--~~~~~gWR~~f~i~~ 199 (490)
T PRK10642 127 AQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVL--ISTIVG---EA--NFLDWGWRIPFFIAL 199 (490)
T ss_pred HHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH--HHHhcC---HH--HhcCccHHHHHHHHH
Confidence 44566667778899999999999999999999988888888877765533 111110 00 000136999999987
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccccc
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 205 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
++.+++.. ....+||+|.+...+++.++++ ++ ..
T Consensus 200 ~~~l~~~~-~~~~~~esp~~~~~~~~~~~~~----------------------------------~~--------~~--- 233 (490)
T PRK10642 200 PLGIIGLY-LRHALEETPAFQQHVDKLEQGD----------------------------------RE--------GL--- 233 (490)
T ss_pred HHHHHHHH-HHHcCCCChhHHHHHHhhhhhc----------------------------------cc--------cc---
Confidence 65555444 3456888875322111100000 00 00
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHH
Q 013336 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (445)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~ 285 (445)
+ +.++.+++++++. .++.+...+...++..++++.+..|.+.|+.+ .++-++ .+ +.+.
T Consensus 234 -~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~----------~~----~~~~ 291 (490)
T PRK10642 234 -Q---DGPKVSFKEIATK---HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSH-NLHYSE----------DH----GVLI 291 (490)
T ss_pred -c---ccccCCHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH----------HH----HHHH
Confidence 0 0012235555542 12222222333344445666677778877754 233221 11 1122
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHh
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAIT 363 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLl 363 (445)
.....+...+.+.+.+++.||+|||+.+.++.+++.++........ .. +... ...+...+.|+. .....-.+++
T Consensus 292 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~-~~~~--~~~~~~~~~g~~~~~~~g~~~~~~ 367 (490)
T PRK10642 292 IIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI-NS-NVIG--LIFAGLLMLAVILNCFTGVMASTL 367 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH-hC-CCHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334455666677889999999999988877665443322211111 00 1110 011111222322 1222234667
Q ss_pred hhhhccCCCCcccchhH-HHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCCcc
Q 013336 364 AELTADSGGGQGLAIGV-LNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFR 438 (445)
Q Consensus 364 s~~~~~~~~~~G~~~gi-~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~~~ 438 (445)
.++.|++ .+|+.+|+ +|+.. +...++|.+.+.+.+..+.. ...+++..+.++++.+.. +++||++++..+
T Consensus 368 ~~~~p~~--~Rg~~~g~~~~~~~-~~g~~~p~i~g~l~~~~~~~-~~~~~~~~~~~~i~~~~~-~~~pes~~~~~~ 438 (490)
T PRK10642 368 PAMFPTH--IRYSALAAAFNISV-LVAGLTPTLAAWLVESTQNL-MMPAYYLMVVAVIGLITG-VTMKETANRPLK 438 (490)
T ss_pred HHHCCCc--cchHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCc-hHHHHHHHHHHHHHHHHH-HHhccccCCCCC
Confidence 7888886 56777886 55544 44577888888777655432 223444455555555544 567999888765
No 26
>PRK03545 putative arabinose transporter; Provisional
Probab=99.63 E-value=6.4e-15 Score=149.68 Aligned_cols=266 Identities=14% Similarity=0.094 Sum_probs=162.4
Q ss_pred ccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHH
Q 013336 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (445)
Q Consensus 53 ~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~ 132 (445)
...++..+++.|..|+|+|++++++.+...++|.++|+.+++. +.+. .++|+.|.+.+++.++..
T Consensus 113 ~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~--l~~~-------------~gw~~~f~~~~~~~~l~~ 177 (390)
T PRK03545 113 IFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRV--IGQY-------------LGWRTTFLAIGGGALITL 177 (390)
T ss_pred HHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHH--HHHH-------------hcHHHHHHHHHHHHHHHH
Confidence 3446678999999999999999999999999999999998876 2222 268999988877666655
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCC
Q 013336 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (445)
Q Consensus 133 ~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (445)
++....+||+|. ++ + +
T Consensus 178 ~~~~~~~~~~~~---~~-~------------------------------------------------------------~ 193 (390)
T PRK03545 178 LLLIKLLPLLPS---EH-S------------------------------------------------------------G 193 (390)
T ss_pred HHHHHhCCCCCC---CC-c------------------------------------------------------------c
Confidence 544444565421 00 0 0
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHH
Q 013336 213 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 292 (445)
Q Consensus 213 ~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~ 292 (445)
..+.+++.++ . +.++..+...++...+.+....|.+.|+.+ .++.++. ...+.+...++.
T Consensus 194 ~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~--------------~~~~~~~~~~~~ 253 (390)
T PRK03545 194 SLKSLPLLFR----R-PALVSLYLLTVVVVTAHFTAYSYIEPFVQQ-VAGLSEN--------------FATLLLLLFGGA 253 (390)
T ss_pred hHHHHHHHHh----C-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCcc--------------HHHHHHHHHHHH
Confidence 0111222222 1 334444444444444444444455555543 2332221 112333456677
Q ss_pred HHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC
Q 013336 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS 370 (445)
Q Consensus 293 ~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~ 370 (445)
+.+.+++.+++.||+++|++.. +..+.++++....... .+.+ ...+...+.|++ .......+.+.+..|+
T Consensus 254 ~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~---~~~~---~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~- 325 (390)
T PRK03545 254 GIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAA---NSEW---HLSVLSIFWGIAIMCIGLAMQVKVLKLAPD- 325 (390)
T ss_pred HHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHh---chHH---HHHHHHHHHHHHHhcchHHHHHHHHHhCCC-
Confidence 7888899999999999886544 4444444332221111 1211 111122234444 2222234555565553
Q ss_pred CCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheec
Q 013336 371 GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 429 (445)
Q Consensus 371 ~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~v 429 (445)
.+|+.+|+.+....+++.++++++|.+.+..|.. .+|.+.+++.+++.++..+..
T Consensus 326 --~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 326 --ATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLS--SIGYVGAALALAALVWSILIF 380 (390)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChh--HHHHHHHHHHHHHHHHHHHHc
Confidence 4688999999999999999999999999988864 578888888888777766544
No 27
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.62 E-value=3.6e-15 Score=148.39 Aligned_cols=261 Identities=14% Similarity=0.064 Sum_probs=164.4
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++.....++..+++.|.+|+++|++++++.+....+|.++|+.+++. +.+. .++++.|.+.+
T Consensus 101 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~--l~~~-------------~g~~~~~~~~~ 165 (365)
T TIGR00900 101 ILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGL--MYAT-------------LGIKWAIWVDA 165 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH--HHHH-------------hhHHHHHHHHH
Confidence 34455556667889999999999999999999999999999999999886 2221 25788888876
Q ss_pred HHHHHHHhheee-EeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccc
Q 013336 126 VFLTLCALVTIY-FADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (445)
Q Consensus 126 i~~~i~~~~t~~-~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
+..+++.++... ..||++ +.++++.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~--------------------------------------------------- 192 (365)
T TIGR00900 166 VGFAISALLIVSVRIPELA--ASEIQALS--------------------------------------------------- 192 (365)
T ss_pred HHHHHHHHHHHhcccccCC--Cccccccc---------------------------------------------------
Confidence 655555433222 222221 10000000
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhh-hccccccceeeecCCCCCCChhhHHHHHHhhHHH
Q 013336 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFF-LFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGA 283 (445)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~-~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~ 283 (445)
+ +.....++-++.+++ .+.++.+++..++.+....... .+.+.|..+ .++.++ .+ .|
T Consensus 193 --~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~----~~- 250 (365)
T TIGR00900 193 --N----AVLRDTREGIKFVLK-NPLLRTLLLLALLFNLVFAPAIVALFPYVQSK-YLGRGS---------TH----YG- 250 (365)
T ss_pred --h----hHHHHHHhHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HhCCch---------HH----HH-
Confidence 0 000111222223333 2456666666666666655554 555555543 333321 01 12
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+++...+.+++.+++.||++||++...+.++.++++....+... +.+ ...+...+.|++ .......+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~g~~~~~~~~~~~~ 324 (365)
T TIGR00900 251 WVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPP---NFP---LFLVLWFAIGVGYGPINVPQGT 324 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhch---hHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 2334556677778888899999999999998887777776655444321 111 122223345554 44556678
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccccccc
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 404 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g 404 (445)
++.+..|++ .+|+.+|+.|....+++.+++.+.|.+.|..|
T Consensus 325 ~~~~~~~~~--~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 325 LLQRRVPAE--LLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 889999875 67999999999999999999999998887643
No 28
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.61 E-value=4e-15 Score=149.01 Aligned_cols=291 Identities=10% Similarity=0.012 Sum_probs=166.1
Q ss_pred Hhhch-hhHHhhhcCCcccccccCCCcceehh---hHHHHHH-------------------HHhccccccchhhHHHHhc
Q 013336 8 IIGFS-ADIGYILGDTKEHCSKFRGTRTRAAF---VFVIGFW-------------------LLDLANNTVQGPARALLAD 64 (445)
Q Consensus 8 ~l~~~-~~ig~~l~d~~~~~~~~~~~~~~~i~---~~v~g~~-------------------lld~s~n~~~~p~~A~i~D 64 (445)
.+++. +.+...+.|+-. ..++||||+|.+. +..+... +..++......+..+++.|
T Consensus 32 ~~~~~~~~~~g~~~Dr~~-~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~ 110 (356)
T TIGR00901 32 GLPYSLKFLWSPLVDTVY-LPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLE 110 (356)
T ss_pred HHHHHHHHHHHHHHhccc-CCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44554 666667789753 2356888888542 1111111 1222333345678999999
Q ss_pred CCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeeccCC
Q 013336 65 LSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPL 144 (445)
Q Consensus 65 ~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~ 144 (445)
.+|+++|++++++.+....+|.++|+.+++. +...++ .+ ......+|..|++.++..+++.++.++..||++.
T Consensus 111 ~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~--l~~~~g---~~--~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~ 183 (356)
T TIGR00901 111 ILSDEELGYGSTIYIVGYRAGMLLSGSLALV--LASPEF---AN--TGLITLWGYIFFWTALLILPGLLVTLFLAKEPQE 183 (356)
T ss_pred hCCHhhhchHHHHHHHHHHHHHHHHHHHHHH--Hhhhcc---cc--cccccccHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 9999999999999999999999999988865 222211 00 0001238999999888877776655555677421
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccchHHHHHHHh
Q 013336 145 TVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSL 224 (445)
Q Consensus 145 ~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (445)
.+.++++ +. ++.+..++++++.
T Consensus 184 ~~~~~~~------------------------------------------~~---------------~~~~~~~~~~~~~- 205 (356)
T TIGR00901 184 DASVPKP------------------------------------------LT---------------QAVLKPIREFFQR- 205 (356)
T ss_pred ccccchh------------------------------------------HH---------------HHHHHHHHHHHHh-
Confidence 1000000 00 0011223333332
Q ss_pred ccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHH-HHHHHHhhhhhhh
Q 013336 225 RHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS-VVLGVSSFLIEPM 303 (445)
Q Consensus 225 ~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~-i~~~i~s~i~~~l 303 (445)
+.+ +.++.+.+..++.+++......+.+.|+.+ ++.++ + ..|... ..++ +...+..++.+++
T Consensus 206 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~g~~~----------~---~~g~~~-~~~~~~~~~~g~~~~g~l 268 (356)
T TIGR00901 206 KNM-IQALLLLLLIVLYKLGDSAATVLTTLFLLD--MGFSK----------E---EIALVA-KINGLLGAILGGLIGGII 268 (356)
T ss_pred cCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCH----------H---HHHHHh-HHHHHHHHHHHHHHHHHH
Confidence 111 135555555666667777777777777764 33221 1 122111 1223 3445667888999
Q ss_pred hhhcCchhhHHHHHHHHHHHHHHHHHhhhcc-------ccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCc
Q 013336 304 CRWIGSRLVWAISNFIVFACMATTAIISVIS-------VREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQ 374 (445)
Q Consensus 304 ~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~ 374 (445)
.||+|+|+..+++.++.+++.....+..... .+.+ .......+.++. ..+..-.+++.+..|++ .+
T Consensus 269 ~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~--~~ 343 (356)
T TIGR00901 269 MQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLL---MLFLTITLEAVTGGLGTVAFVAFLSKLSNPK--FG 343 (356)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH---HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCC--cc
Confidence 9999999998888887777655444332110 0101 011112222333 44455578899999986 68
Q ss_pred ccchhHHHHHHH
Q 013336 375 GLAIGVLNLAIV 386 (445)
Q Consensus 375 G~~~gi~n~~~~ 386 (445)
|+++|+.++...
T Consensus 344 g~~~g~~~~~~~ 355 (356)
T TIGR00901 344 ATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHh
Confidence 999999988653
No 29
>PRK09952 shikimate transporter; Provisional
Probab=99.60 E-value=8.1e-15 Score=151.63 Aligned_cols=299 Identities=13% Similarity=0.047 Sum_probs=168.8
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++.....+...+|+.|..|+++|++..+.......+|.+++..++.. +...++ .. ......||.+|++.+
T Consensus 134 l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~--l~~~~~---~~--~~~~~gWr~~f~~~~ 206 (438)
T PRK09952 134 IQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSL--ISMMTT---DE--QFLSWGWRIPFLFSI 206 (438)
T ss_pred HHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH--HHHhCC---HH--HhhccChHHHHHHHH
Confidence 45666666777888999999999999999999988888888888765543 111110 00 001136899999887
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccccc
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 205 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
++.++... .....||+|.+..++.+. +
T Consensus 207 ~~~l~~~~-l~~~~~es~~~~~~~~~~--------------------------------------------------~-- 233 (438)
T PRK09952 207 VLVLIALW-VRNGMEESAEFEQQQHEQ--------------------------------------------------A-- 233 (438)
T ss_pred HHHHHHHH-HHHhCCCChhHHHHHhhc--------------------------------------------------c--
Confidence 76544332 223455654221110000 0
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHH
Q 013336 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (445)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~ 285 (445)
+. ..+.+..+ .+++.|+.........+..+++.+.+..|.+.|+.+ .++-++ +. ....+
T Consensus 234 -~~---~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-~~g~s~----------~~---~~~~~ 292 (438)
T PRK09952 234 -AA---KKRIPVIE---ALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQ-NLGLPR----------EL---FLNIG 292 (438)
T ss_pred -cc---cccCCHHH---HHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH----------HH---HHHHH
Confidence 00 00011111 122335544444444555566666666677777654 233221 01 11112
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-ccccccc--eecchhHHH
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GANQAIK--ITYSVPFAI 362 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~--~~~svP~aL 362 (445)
.+.++...+...+.++++||+|||+++..+.++.+++.+...+..... +.. ..++. ..+.++. ....+-+++
T Consensus 293 -~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~l~~~~~~~~~~~~~~~ 367 (438)
T PRK09952 293 -LLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQ-SIF---WIVFFSIMLANIAHDMVVCVQQPM 367 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcC-ChH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233555666777889999999999998887666555433222211110 111 11111 1222333 334445788
Q ss_pred hhhhhccCCCCcccchhHH-HHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 363 TAELTADSGGGQGLAIGVL-NLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~-n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
++|..|.+ .+++..|+. +....++..++|.+.+.+.+..++++...+.+.+++++++++.+ +.+|||+
T Consensus 368 ~~e~~p~~--~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~-~~~~~~~ 436 (438)
T PRK09952 368 FTEMFGAS--YRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA-LLMKDNQ 436 (438)
T ss_pred HHHHCCcc--hhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH-HHccccc
Confidence 99999986 455556664 45556888899999998887654333445677777777777765 4567754
No 30
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.60 E-value=1.1e-14 Score=151.64 Aligned_cols=339 Identities=12% Similarity=0.074 Sum_probs=220.9
Q ss_pred eehhHhhchhhHHhhhcCCcccccccCCCcceehhhHH---------------------HHHHHHhccccccchhhHHHH
Q 013336 4 VAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFV---------------------IGFWLLDLANNTVQGPARALL 62 (445)
Q Consensus 4 i~l~~l~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~~v---------------------~g~~lld~s~n~~~~p~~A~i 62 (445)
++.++.+...++-.++.|.. ++||+|.++.++ +-+++-+++.+.......||+
T Consensus 78 is~l~~all~P~lGa~aD~~------~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 78 ISGLLQALLAPFLGAIADYG------GRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHccc------ccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45555566666666778976 467777665444 223344556677888999999
Q ss_pred hcCCCccch--------------------------hhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccc
Q 013336 63 ADLSGPDQR--------------------------NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGN 116 (445)
Q Consensus 63 ~D~~p~~qr--------------------------~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~ 116 (445)
+|.++++.+ ++.+++.-.+..+|+++..+++-.. -... +.. ......
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~--~~~~----~~~-~~~~~~ 224 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLL--VISP----GST-ASNTWA 224 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHH--HHcC----CCc-cccchh
Confidence 999999888 8998888888888888877665431 0000 000 011235
Q ss_pred hhHHHHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhh
Q 013336 117 LKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLK 196 (445)
Q Consensus 117 ~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (445)
.|..+.+.++-.++..++..+++||+|..+..+..
T Consensus 225 ~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~--------------------------------------------- 259 (477)
T PF11700_consen 225 IRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG--------------------------------------------- 259 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc---------------------------------------------
Confidence 79999999998888888899999998743111100
Q ss_pred hccccccccCCCCCCCccchHHHH---HHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhH
Q 013336 197 HISKKAEDTNGSFNDGPGAVLVNL---LTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVK 273 (445)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~ 273 (445)
+ ...+..+|++ ++.+++. |++.++++..|+-.-|..++..+...|..+ .++-++.
T Consensus 260 ----------~---~~~~~g~~~l~~t~k~~~~~-~~~~~fLia~~l~~dg~~ti~~~~~i~a~~-~lg~s~~------- 317 (477)
T PF11700_consen 260 ----------S---SYLRFGFKRLWRTFKEIRKL-RQLFLFLIAYFLYSDGVNTIISFAGIYATE-VLGMSTT------- 317 (477)
T ss_pred ----------h---hHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcCHH-------
Confidence 0 0012233443 4445554 355666777777777888888888877765 3443311
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCch--hhHHHHHHHHHHHHHH--HHHhhhc--cccccCCcceeeec
Q 013336 274 FYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR--LVWAISNFIVFACMAT--TAIISVI--SVREYSGGIEHGIG 347 (445)
Q Consensus 274 ~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r--~l~~~g~~~~ai~~~~--~~~~~~~--~~~~~~~~~~~~~~ 347 (445)
....++ ++..+++++.+++.+++.||+|.| +++.++.+...+..+. +++.... ..+.+ ...++.
T Consensus 318 ------~l~~~~-l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~---~f~~~a 387 (477)
T PF11700_consen 318 ------QLIVFG-LVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPW---EFWVLA 387 (477)
T ss_pred ------HHHHHH-HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHH---HHHHHH
Confidence 122223 345778889999999999999999 7777766555332221 1111110 11222 112222
Q ss_pred cccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 348 ANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 348 ~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
.+.|+. ..++..-++.++..|++ +.+..+|++++..-..-+++|++.|.+.+..|.. ...+..-.++.+++.+ .
T Consensus 388 ~~~G~~~G~~qs~sRs~~~~LiP~g--~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~-r~g~~~l~~lf~~gl~-l 463 (477)
T PF11700_consen 388 VLIGLFMGGIQSASRSLFSRLIPPG--REAEFFGLYAITGKASSWLGPLLFGLITDATGSQ-RYGFLFLLVLFLIGLI-L 463 (477)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-hhHHHHHHHHHHHHHH-H
Confidence 335544 66778889999999997 5699999999999999999999999999998854 4456655665566655 4
Q ss_pred heeccCCCCCC
Q 013336 426 TLKLPHLSSNS 436 (445)
Q Consensus 426 ~~~vpe~~~~~ 436 (445)
.+.+++.|||.
T Consensus 464 l~~v~~~~g~~ 474 (477)
T PF11700_consen 464 LFFVDVEKGRE 474 (477)
T ss_pred Hhhccchhhhh
Confidence 47899888874
No 31
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.58 E-value=2.9e-14 Score=147.37 Aligned_cols=300 Identities=12% Similarity=0.059 Sum_probs=171.0
Q ss_pred cccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHH
Q 013336 52 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 131 (445)
Q Consensus 52 n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~ 131 (445)
...+++..+++.|..|+++|++++++.....++|..+++.+.+.. .... .++|..|++.+++.++.
T Consensus 133 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~-~~~~-------------~~w~~~f~~~~~~~~i~ 198 (438)
T TIGR00712 133 GMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG-MAWF-------------NDWHAALYFPAICAIIV 198 (438)
T ss_pred hcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH-HHHh-------------hhhHHHHHHHHHHHHHH
Confidence 345567888999999999999999999999999988887654421 1110 25889999877776666
Q ss_pred HhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCC
Q 013336 132 ALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFND 211 (445)
Q Consensus 132 ~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (445)
.++..+.+||+|.....++. ++. + + +.+++ .. ++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~-~~~----~----~----------------------~~~~~--------~~----~~~-- 233 (438)
T TIGR00712 199 ALFAFAMMRDTPQSCGLPPI-EEY----R----N----------------------DYPDD--------YN----EKA-- 233 (438)
T ss_pred HHHHHHhccCCHHhcCCCCc-hhc----c----c----------------------ccccc--------cc----ccc--
Confidence 66666678887642211000 000 0 0 00000 00 000
Q ss_pred CccchHHHHH-HHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHH
Q 013336 212 GPGAVLVNLL-TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (445)
Q Consensus 212 ~~~~~~~~~~-~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~ 290 (445)
+.+.+.++.+ +...+ .+.++.+++..++...+.+.+..|.+.|+.+ .++-++. + .+ +....++
T Consensus 234 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~---------~----~~-~~~~~~~ 297 (438)
T TIGR00712 234 EQELTAKEIFMQYVLP-NKLLWYIAIANVFVYLLRYGVLDWSPTYLKE-VKHFALD---------K----SS-WAYFLYE 297 (438)
T ss_pred ccccchHHHHHHHHcc-CchHHHHHHHHHHHHHHHHHHHHhHHHHHHH-ccCCChh---------h----HH-HHHHHHH
Confidence 0001122222 22233 2456666666677666777777888888775 3333321 1 11 3334566
Q ss_pred HHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhcc-ccccCCcceeeeccccccceecchh--HHHhhhhh
Q 013336 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVIS-VREYSGGIEHGIGANQAIKITYSVP--FAITAELT 367 (445)
Q Consensus 291 i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Gi~~~~svP--~aLls~~~ 367 (445)
+.+.+..++.+++.||+++++....+.....+..+......... .+.+ .........|+......+ .+...+..
T Consensus 298 ~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 374 (438)
T TIGR00712 298 YAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPL---VDMICMIVIGFLIYGPVMLIGLHALELA 374 (438)
T ss_pred HHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchH---HHHHHHHHHHHHHccHHHHHHHHHHHhc
Confidence 77778888999999999654332333322222211111111110 0111 111111123322111211 23466777
Q ss_pred ccCCCCcccchhHHHHHHHHH-HHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 368 ADSGGGQGLAIGVLNLAIVIP-QMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 368 ~~~~~~~G~~~gi~n~~~~l~-qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
|++ .+|+.+|+.|+..+++ ++++|.+.|.+.+..|.+ ..|++..++++++.+...++.||.|
T Consensus 375 ~~~--~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 375 PKK--AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWD--GGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred Chh--heeeehhhhchHHHhhhhhhcchhHHHHHHhccch--HHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 764 5788999999988876 678999999999988743 5677777777778777777888865
No 32
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.58 E-value=3.5e-14 Score=146.52 Aligned_cols=295 Identities=11% Similarity=0.037 Sum_probs=159.9
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++.....+...+++.|..|+++|+++.++.......|.+++..++.+ ....++ +. ......||++|++.+
T Consensus 133 l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~--~~~~~~---~~--~~~~~gWr~~F~i~~ 205 (432)
T PRK10406 133 FQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVV--LQQTLE---DA--ELREWGWRIPFALGA 205 (432)
T ss_pred HHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHH--HHHhCC---HH--HHhccchHHHHHHHH
Confidence 44555666778889999999999999999999888888888887766543 111110 00 000136999999988
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccccc
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 205 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
++.++... ....+||+|..+.+ +
T Consensus 206 ~~~ll~~~-~~~~~~e~~~~~~~--~------------------------------------------------------ 228 (432)
T PRK10406 206 VLAVVALW-LRRQLDETSQQETR--A------------------------------------------------------ 228 (432)
T ss_pred HHHHHHHH-HHhcCCCCchHHHh--h------------------------------------------------------
Confidence 76665543 23345554321000 0
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHH-HHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHH
Q 013336 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMAL-TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (445)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~-~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~ 284 (445)
+ .+..+++++++. +..+.+++..++ .+.+++.+..|.+.|+.+ .++-++ ++ .+ .
T Consensus 229 -~----~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-~~g~s~----------~~---~~-~ 283 (432)
T PRK10406 229 -L----KEAGSLKGLWRN-----RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVN-TAGMHA----------NV---AS-G 283 (432)
T ss_pred -h----cccccHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH----------HH---HH-H
Confidence 0 011235555542 333334444333 355666677777777754 233221 11 11 1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
...+..+...+...+.+++.||++||++..++.++.+++........... +.. ...+....+.++. ....+.+++
T Consensus 284 ~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 360 (432)
T PRK10406 284 IMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNV-SSP--YAAFGLVMCALLIVSFYTSISGIL 360 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcC-CcH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233444556667789999999999988776555443322211111100 111 0111111111111 222344577
Q ss_pred hhhhhccCCCCcccchhHHHHHHHH-HHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCCcc
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVI-PQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFR 438 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l-~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~~~ 438 (445)
++|.+|++ .+|+.+|+.|....+ .....|.+.+. .+..|.. ...+++.++..+++.+..++ .+++||+.|
T Consensus 361 ~~e~fp~~--~r~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~g~~-~~~~~~~~~~~~i~~~~~~~--l~~~~~~~~ 431 (432)
T PRK10406 361 KAEMFPAQ--VRALGVGLSYAVANALFGGSAEYVALS-LKSIGME-TAFFWYVTLMAVVAFLVSLM--LHRKGKGMR 431 (432)
T ss_pred HHHHCCCC--ccchhhhHHHHHHHHHHHhHHHHHHHH-HHHhCCC-cHHHHHHHHHHHHHHHHHHH--hhhcccccC
Confidence 89999986 568888888765333 23335555553 3444533 34566666777777665543 466788765
No 33
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.56 E-value=2.3e-14 Score=146.08 Aligned_cols=285 Identities=8% Similarity=0.025 Sum_probs=173.3
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHH
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 121 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f 121 (445)
++-.+..++.....+...+++.|..| ++|++++++.+....+|..+|..++.. +.+.. .++|..+
T Consensus 102 ~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~--l~~~~------------~~w~~~~ 166 (393)
T PRK09705 102 SSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPW--LVQHS------------ETWYQTL 166 (393)
T ss_pred HHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHH--HHHhc------------CCHHHHH
Confidence 33444455555666778889999886 889999999999988999998887764 11110 1466666
Q ss_pred HHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccc
Q 013336 122 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 201 (445)
Q Consensus 122 ~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
.+.++..++.....+...+++|. ++++ +
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~---------------------------------------------- 194 (393)
T PRK09705 167 AWWALPAVVALFAWWWQSAREVA---SSHK---T---------------------------------------------- 194 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCc---cccC---C----------------------------------------------
Confidence 54443333332222211122111 0000 0
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhH
Q 013336 202 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 281 (445)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~ 281 (445)
+ ... ++ .++ . +..+.+++..++..+++..+..|.+.|+.+ ++.++. + .
T Consensus 195 -----~---~~~----~~---~l~-~-~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~--~g~s~~---------~----a 242 (393)
T PRK09705 195 -----T---TTP----VR---VVF-T-PRAWTLGVYFGLINGGYASLIAWLPAFYIE--IGASAQ---------Y----S 242 (393)
T ss_pred -----C---cCC----cc---ccc-C-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCChh---------h----h
Confidence 0 000 00 011 1 223445555555566777777777777754 333221 1 1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchh
Q 013336 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVP 359 (445)
Q Consensus 282 g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP 359 (445)
| ..+.++++...+..++.+++.||+++|+..+.+..+.+++++++..... +.. . .+..+.|++ ...+..
T Consensus 243 g-~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~----~-~~~~l~g~g~g~~~~~~ 313 (393)
T PRK09705 243 G-SLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL---QLP----V-LWAMVCGLGLGGAFPLC 313 (393)
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc---hHH----H-HHHHHHHHhccchHHHH
Confidence 2 2334567777888899999999999999988887777666554332221 111 1 112223433 333333
Q ss_pred HHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCC
Q 013336 360 FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNS 436 (445)
Q Consensus 360 ~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~ 436 (445)
.+...+..+++ +.+|+.+|+.+....+++.++|.+.|.+.|..|.. ...|.+..++.+++.++.+.+.|||+.|-
T Consensus 314 ~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 314 LLLALDHSVQP-AIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNY-LMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHhhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-hHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 44555665432 35799999999999999999999999999988854 35678888888888777778899998874
No 34
>PRK09848 glucuronide transporter; Provisional
Probab=99.56 E-value=2.5e-14 Score=148.28 Aligned_cols=157 Identities=17% Similarity=0.056 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
|.++.++++.++.+.+...+..+.+.|..+ +++.++ . .+.+.+....+..++.+.+.+++.||+|
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~----------~----~~~~~~~~~~~~~~~~~~l~~~l~~r~g 292 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRY-VLNDTG----------L----FTVLVLVQNLVGTVASAPLVPGMVARIG 292 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEee-ecCChH----------H----HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 557777778888888777766666666654 444221 1 1212222223445566888899999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC-----CCCcccchhHH
Q 013336 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS-----GGGQGLAIGVL 381 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~-----~~~~G~~~gi~ 381 (445)
+|+++.+|.++++++++.+.+... +..+ ...+...+.|++ .....+++++++..|.+ .|..|.++|+.
T Consensus 293 ~~~~~~~g~~~~~i~~~~~~~~~~---~~~~--~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~ 367 (448)
T PRK09848 293 KKNTFLIGALLGTCGYLLFFWVSV---WSLP--VALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLF 367 (448)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCc---hhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHH
Confidence 999999998888777655443210 1110 111112334444 55677788888888753 24569999999
Q ss_pred HHHHHHHHHHhhhccccccccccC
Q 013336 382 NLAIVIPQMIVSLGAGPWDALFGG 405 (445)
Q Consensus 382 n~~~~l~qii~~~~~g~l~~~~g~ 405 (445)
|....+++.+++.+.|.+.+..|.
T Consensus 368 ~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 368 SFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999998887766654
No 35
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.56 E-value=3.2e-14 Score=142.00 Aligned_cols=274 Identities=15% Similarity=0.070 Sum_probs=159.5
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++......+...++.|..| ++|+++.++.....++|.+++..+.+. +.+. ..+|+.|++.+
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~-------------~~~~~~f~~~~ 163 (377)
T TIGR00890 100 LASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITS--VINL-------------EGVPAAFIYMG 163 (377)
T ss_pred HHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHH--HHhc-------------ccHHHHHHHHH
Confidence 3334444444556667777765 679999999999999988765433322 1111 25889998877
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccccc
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 205 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
++.++..++..+.+||+|..+.++++ + .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------------------------------------------~--- 191 (377)
T TIGR00890 164 IIFLLVIVLGAFLIGYPPGQLIKTNI--E-----------------------------------------------V--- 191 (377)
T ss_pred HHHHHHHHHHHHheecCchhccccCc--c-----------------------------------------------c---
Confidence 76666655555566665421111000 0 0
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHH
Q 013336 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (445)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~ 285 (445)
+ ......++.++ + +.++.+.+..++..+.......+.+.|..+ ++.++ ......
T Consensus 192 -~----~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------------~~~~~~ 245 (377)
T TIGR00890 192 -S----VKDYTVWEMLR---T--PQFWVLYLSFFLNAVSGLLLIGLYKPYGQS--LGLSD--------------GFLVLA 245 (377)
T ss_pred -c----hhhhhHHHHHc---C--ccHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCH--------------HHHHHH
Confidence 0 00111222222 1 333444444444333333333344444322 12110 011123
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHh
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAIT 363 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLl 363 (445)
...+++...+.+++.+++.||+|||+...++.++.+++++...+.. +... ........+.|+. ...++-.+++
T Consensus 246 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~g~~~g~~~~~~~~~~ 320 (377)
T TIGR00890 246 VSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP----MLND-VLFLATVALVFFTWGGTISLFPSLV 320 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc----cchh-HHHHHHHHHHHHHhccchhccHHHH
Confidence 3456677778889999999999999999888888887766544432 1110 0011111223332 3333344778
Q ss_pred hhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHH
Q 013336 364 AELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGG 422 (445)
Q Consensus 364 s~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~ 422 (445)
.|..|++ ++|+.+|+.+....+++.+++.+.|.+.+..|. ...|.+.+++++++.
T Consensus 321 ~~~~~~~--~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~--~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 321 SDIFGPA--NSAANYGFLYTAKAVAGIFGGLIASHALTEIGF--EYTFIVTGAFALTSL 375 (377)
T ss_pred HHHhhhh--hhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhch--hhHHHHHHHHHHHhc
Confidence 8998876 679999999999999999999999999888774 357777777776654
No 36
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.56 E-value=4.2e-14 Score=139.46 Aligned_cols=255 Identities=17% Similarity=0.188 Sum_probs=187.2
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHH
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 121 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f 121 (445)
++..+..++.+...++..+++.|..|+|+|++++++......+|..+|+.+++. ..+. .++|+.|
T Consensus 92 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~-------------~~~~~~~ 156 (352)
T cd06174 92 VGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGL--LAES-------------LGWRWLF 156 (352)
T ss_pred HHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHH-------------hhHHHHH
Confidence 445556777888899999999999999999999999999999999999998876 2221 2478888
Q ss_pred HHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccc
Q 013336 122 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 201 (445)
Q Consensus 122 ~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
.+.+++.+++.++..+ .+
T Consensus 157 ~~~~~~~~~~~~~~~~-~~------------------------------------------------------------- 174 (352)
T cd06174 157 LILAILGLLLALLLLF-LL------------------------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHHHHH-HH-------------------------------------------------------------
Confidence 8877766665543221 11
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhH
Q 013336 202 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 281 (445)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~ 281 (445)
|.++.+++..++.+.+...+..|.+.+..+ .++.++ .+ .
T Consensus 175 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~----~ 213 (352)
T cd06174 175 ---------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQE-VLGLSA---------AE----A 213 (352)
T ss_pred ---------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCH---------HH----H
Confidence 345556667777777888888888887765 333321 11 1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCchh-hHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecch
Q 013336 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRL-VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSV 358 (445)
Q Consensus 282 g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~-l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~sv 358 (445)
+ +....+++...+...+.+++.||+|+|+ .+..+.++..++++...+.. +.+ ...+...+.|+. .....
T Consensus 214 ~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~ 285 (352)
T cd06174 214 G-LLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP----SLA---LLLVALLLLGFGLGFAFPA 285 (352)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHHHHhccchh
Confidence 1 3334566778888999999999999999 88889888888776655443 211 122223345554 55677
Q ss_pred hHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhh
Q 013336 359 PFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 426 (445)
Q Consensus 359 P~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~ 426 (445)
..+++.|..|++ .+|+.+|+.+....+++.+++.+.|.+.+..|. ...+.+.+++.+++.++..
T Consensus 286 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~--~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 286 LLTLASELAPPE--ARGTASGLFNTFGSLGGALGPLLAGLLLDTGGY--GGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHhhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc--chHHHHHHHHHHHHHHHhe
Confidence 788999999875 679999999999999999999999999887664 3578888888888777553
No 37
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.56 E-value=7e-14 Score=142.01 Aligned_cols=253 Identities=14% Similarity=0.008 Sum_probs=146.8
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
..++......+..+++.|..|+++|+++.++......+|..+|+.+++. +.+. ..++..|++.++
T Consensus 101 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~--l~~~-------------~g~~~~~~~~~~ 165 (392)
T PRK10473 101 QGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHL--IMLK-------------FPWQSLFYTMAA 165 (392)
T ss_pred HHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhC-------------cChHHHHHHHHH
Confidence 3444555667889999999999999999999999999999999988765 2111 257888888777
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
+.+++.++....+||++... ++++
T Consensus 166 ~~~i~~~~~~~~~~~~~~~~-~~~~------------------------------------------------------- 189 (392)
T PRK10473 166 MGILVLLLSLFILKETRPAR-APAA------------------------------------------------------- 189 (392)
T ss_pred HHHHHHHHHHHHcCCCCCcc-cCCc-------------------------------------------------------
Confidence 66666666666678764211 0000
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH
Q 013336 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l 286 (445)
+ ......++.+ ++ +.++..++..++.+.+...+..+.+.+..+ .++-++ . + .+ ..+
T Consensus 190 ~----~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~-------~--~----~~-~~~ 245 (392)
T PRK10473 190 S----SKPRENSESL---LN--RFFLSRLVITTLSVTVILTFVNTSPVLLME-QMGFSR-------G--E----YA-IIM 245 (392)
T ss_pred c----chHHHHHHHH---hC--HHHHHHHHHHHHHHHHHHHHHHhCHHHHHH-HcCCCH-------H--H----HH-HHH
Confidence 0 0001112222 22 233334444444444444444444444332 222221 0 1 12 233
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccceecchhHHHhhhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKITYSVPFAITAEL 366 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~svP~aLls~~ 366 (445)
..+++...+..++.+++.||+|+|+.+.++.++..++++...+.. +.+ .......+.+.+.....+.....+.
T Consensus 246 ~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~~~g~~~~~~~~~~~~~ 318 (392)
T PRK10473 246 ALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP----SHA---VSLFGITLICAGFSVGFGVAMSQAL 318 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH----HHH---HHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 456667778888999999999999999998888777665544432 111 0111112222221112222333344
Q ss_pred hccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCc
Q 013336 367 TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG 406 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~ 406 (445)
.|.+ +.. |..+....++|.+++.+++.+.+..|..
T Consensus 319 ~~~~-~~~----g~~~~~~~~~~~~g~~~~~~l~~~~g~~ 353 (392)
T PRK10473 319 GPFS-LRA----GVASSTLGIAQVCGSSLWIWLAAVLGIS 353 (392)
T ss_pred ccCc-ccc----cHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4543 222 5556667788999999888888877753
No 38
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.56 E-value=4.7e-14 Score=146.46 Aligned_cols=303 Identities=12% Similarity=0.083 Sum_probs=168.7
Q ss_pred hccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhh-HHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGN-ILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 48 d~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~-~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
.++.....++..+.+.|..|+++|++++++.....++|. +.+++++....+ ..++|+.|++.++
T Consensus 131 gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~---------------~~gw~~~f~i~~~ 195 (452)
T PRK11273 131 GWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW---------------FNDWHAALYMPAF 195 (452)
T ss_pred HHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH---------------hccHHHHHHHHHH
Confidence 333344456678889999999999999999988888876 456654422101 0258889988777
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
+.++..++..+.+||+|.....+++ ++.++ +.+++ .+++
T Consensus 196 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~------------------------------~~~~~---------~~~~- 234 (452)
T PRK11273 196 AAILVALFAFAMMRDTPQSCGLPPI-EEYKN------------------------------DYPDD---------YNEK- 234 (452)
T ss_pred HHHHHHHHHHHHccCCHhhcCCCCh-hhhhh------------------------------ccccc---------cccc-
Confidence 6666556666777887632111100 00000 00000 0000
Q ss_pred CCCCCCccchHHHHH-HHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHH
Q 013336 207 GSFNDGPGAVLVNLL-TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~-~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~ 285 (445)
+ ..+.+.++.+ +.+.+ .+.++.+++..++.....+.+..|.+.|+.+ .++-++. + .+ +.
T Consensus 235 ~----~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~-~~g~s~~---------~----~~-~~ 294 (452)
T PRK11273 235 H----EQELTAKQIFMQYVLP-NKLLWYIAIANVFVYLLRYGILDWSPTYLKE-VKHFALD---------K----SS-WA 294 (452)
T ss_pred c----CCCccHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH---------H----HH-HH
Confidence 0 0011223322 22223 2556667777777776667777888888865 2332210 1 11 23
Q ss_pred HHHHHHHHHHHhhhhhhhhhhc--CchhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccceecc--hhH
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWI--GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKITYS--VPF 360 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~--g~r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~s--vP~ 360 (445)
...+++...+..++.++++||+ +||+... ....+.+++++...+.. . +... ...+....+|...... ...
T Consensus 295 ~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~--~-~~~~--~~~~~~~~~g~~~~~~~~~~~ 369 (452)
T PRK11273 295 YFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNP--A-GNPT--VDMACMIVIGFLIYGPVMLIG 369 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhc--c-cChH--HHHHHHHHHHHHHHhHHHHHH
Confidence 3355666677788899999999 4554322 22222233222211111 0 1110 0111111233221111 123
Q ss_pred HHhhhhhccCCCCcccchhHHHHHHHHHHHH-hhhccccccccccCcchhHHHHHHHHHHHHHHhhhe-eccCCCCC
Q 013336 361 AITAELTADSGGGQGLAIGVLNLAIVIPQMI-VSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL-KLPHLSSN 435 (445)
Q Consensus 361 aLls~~~~~~~~~~G~~~gi~n~~~~l~qii-~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~-~vpe~~~~ 435 (445)
++..++.|++ .+|+.+|+.|....++..+ ++.+.|.+.|..|. ...|.+.+++++++++++.. ..+|+|.+
T Consensus 370 ~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (452)
T PRK11273 370 LHALELAPKK--AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW--DGGFMVMIGGSILAVILLIVVMIGEKRHH 442 (452)
T ss_pred HHHHHHcChh--hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 4566888875 6799999999988888765 68889999998884 35777777778888777764 34566554
No 39
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.56 E-value=6.1e-14 Score=143.37 Aligned_cols=274 Identities=13% Similarity=0.096 Sum_probs=157.4
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHH
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 124 (445)
.+..++.....++..+++.|.+|+|+|++++++......+|..+|+.+++.+ .+ ..+++.|++.
T Consensus 107 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l--~~--------------~g~~~~f~~~ 170 (400)
T PRK11646 107 ILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWL--LQ--------------YDFRLVCATG 170 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH--------------hhHHHHHHHH
Confidence 3344444455667889999999999999999999999999999999999873 11 1578899887
Q ss_pred HHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccc
Q 013336 125 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (445)
Q Consensus 125 ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
+++.+++.++.....||.+. ++.+
T Consensus 171 ~~~~~~~~i~~~~~~~~~~~---~~~~----------------------------------------------------- 194 (400)
T PRK11646 171 AVLFVLAAAFNAWLLPAYKL---STVR----------------------------------------------------- 194 (400)
T ss_pred HHHHHHHHHHHHHhCCcccc---cccc-----------------------------------------------------
Confidence 77665554444444555310 0000
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHH
Q 013336 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (445)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~ 284 (445)
+ ..+..++++++ .|+ +..+++..+..+........+.+.|+.+ ..+ ++. + .| +
T Consensus 195 --~----~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~-~~~---------~----~g-~ 247 (400)
T PRK11646 195 --T----PVREGMTRVLR----DKR-FVTYVLTLTGYYMLAVQVMLMLPIMVND-IAG-SPS---------A----VK-W 247 (400)
T ss_pred --h----hhHHHHHHHHc----Cch-HHHHHHHHHHHHHHHHHHHHhhhhhHHh-hcC-Cch---------H----HH-H
Confidence 0 01112333332 233 3334333333222222334455655544 222 211 1 11 1
Q ss_pred HHHHHHHHHHHHhhhhhhhh-hhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMC-RWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~-~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
.+...++..........++. ||++.|+....+.+++++++..+++.. +.+ ...+...+.|++ ...+.-.+
T Consensus 248 l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~----~~~---~~~~~~~l~~~g~~~~~p~~~~ 320 (400)
T PRK11646 248 MYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS----NLQ---QLFTLICLFYIGSIIAEPARET 320 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh----hHH---HHHHHHHHHHHHHHHHHccHHH
Confidence 22233333333333445544 556767666777777776655444332 211 111112223333 22233347
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccC--cchhHHHHHHHHHHHHHHhhh
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG--GNIPAFVLASLSALAGGVVAT 426 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~--~~~~~f~~~~v~~ll~~~~~~ 426 (445)
++.+..|++ .+|+.+|+.|....+++.+++.++|.+.+..++ .....+...+++++++.+...
T Consensus 321 ~~~~~~p~~--~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 321 LSASLADAR--ARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HHHhcCCcc--cchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence 777888875 689999999999999999999999999887532 113456666776666655443
No 40
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.55 E-value=8.4e-14 Score=142.22 Aligned_cols=274 Identities=12% Similarity=0.029 Sum_probs=150.1
Q ss_pred cchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHh
Q 013336 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (445)
Q Consensus 54 ~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~ 133 (445)
...+..+++.|..|+++|++++++.....++|.++|..++.. +.+.+ .++|..|.+.+++.+++.+
T Consensus 111 ~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~--l~~~~------------~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 111 QDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW--LADRV------------LGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH--HHhcc------------cCHHHHHHHHHHHHHHHHH
Confidence 335789999999999999999999999889999998876654 21110 1589999887776665544
Q ss_pred heeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCc
Q 013336 134 VTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGP 213 (445)
Q Consensus 134 ~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (445)
. .+.+||++....++++ . + ++.
T Consensus 177 ~-~~~~~e~~~~~~~~~~-------------------------------------------------~-----~---~~~ 198 (402)
T PRK11902 177 T-TLWAPEPEVPARPPRS-------------------------------------------------L-----G---EAV 198 (402)
T ss_pred H-HHhcCCCcccccccch-------------------------------------------------h-----H---HHH
Confidence 3 4466775421100000 0 0 001
Q ss_pred cchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHH-H
Q 013336 214 GAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSV-V 292 (445)
Q Consensus 214 ~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i-~ 292 (445)
...+++++ +. |.++.+++..++...+......+.+.++.+ .++.++ + ..| +.+...++ .
T Consensus 199 ~~~~~~l~----~~-~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~~G~~~-----------~--~~g-~~~~~~~~~~ 258 (402)
T PRK11902 199 VGPLRDFF----SR-RGAWALLLLIVLYKLGDAFAGSLSTTFLIR-GAGFSA-----------G--EVG-IVNKTLGLAA 258 (402)
T ss_pred HHHHHHHH----hC-cCHHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCH-----------H--HHH-HHHhHHHHHH
Confidence 12233333 32 345555554444433322211222222222 222221 0 122 11112222 3
Q ss_pred HHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC
Q 013336 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS 370 (445)
Q Consensus 293 ~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~ 370 (445)
..+...+.+++.||+|+|+...++.+..+++.+...+......+.+ .......+.++. ......+++...+.++.
T Consensus 259 ~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 335 (402)
T PRK11902 259 TIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLW---TMALAIGIENLCGGMGTAAFVALLMALCNRS 335 (402)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4566788899999999999887766666554433322222111111 111111111111 11222233333444332
Q ss_pred CCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhh
Q 013336 371 GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 426 (445)
Q Consensus 371 ~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~ 426 (445)
-.+++.++.+....+++++++.++|.+.|.+|. ...|.+++++++++.++++
T Consensus 336 --~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~--~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 336 --FSATQYALLSALASVGRVYVGPTSGYLVEAYGW--PGFYLMTVVIALPGLALLW 387 (402)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHH
Confidence 225567888888889998888888999999885 4578888888888877654
No 41
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.55 E-value=3.2e-14 Score=142.87 Aligned_cols=270 Identities=14% Similarity=0.052 Sum_probs=158.8
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++.....++..+++.|..|+++|++..++......+|.++|+.++.. ....++ .. ......+|+.|++.+
T Consensus 105 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~--~~~~~~---~~--~~~~~~w~~~~~~~~ 177 (394)
T TIGR00883 105 IQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLL--LSYLLG---DD--ALLEWGWRIPFLVSA 177 (394)
T ss_pred HHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHH--HHHhcC---HH--HhhccchHHHHHHHH
Confidence 34455556677889999999999999999999999999999999887754 111110 00 000136888998877
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccccc
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 205 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
++.+++..+ ....||+|..+.++++ +
T Consensus 178 ~~~~~~~~~-~~~~~~~~~~~~~~~~---------------------------------------------------~-- 203 (394)
T TIGR00883 178 VLVLIGLYL-RRNLEETPVFEKAQEK---------------------------------------------------H-- 203 (394)
T ss_pred HHHHHHHHH-HHhcCCChhHHHHHhc---------------------------------------------------c--
Confidence 766555442 2345554321111000 0
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHH
Q 013336 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (445)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~ 285 (445)
+ ..+.++++.++. -++.+...+...++.+.+...+..|.+.|+.+ .++.++. + .+ ..
T Consensus 204 -~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---------~----~~-~~ 260 (394)
T TIGR00883 204 -K----KKRGPIRETLTK---HRKPFLLGLGLVIATTTTFYLITTYLPTYLTQ-TLGLSAN---------S----AL-LV 260 (394)
T ss_pred -c----cccCCHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChh---------H----HH-HH
Confidence 0 011223433332 12345555666667777777777777777654 2332210 1 11 22
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHH-HHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACM-ATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
.....+...+...+.+++.||+|||+.+..+..+..++. ....... ...+.+ .......+.|+. .....-+++
T Consensus 261 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~ 336 (394)
T TIGR00883 261 LMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL-DSGSFT---LFFFLVLGLALIGGMYTGPMGSF 336 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh-cCCchH---HHHHHHHHHHHHHHHHhhhHHHH
Confidence 334556677778889999999999998776544443322 1111111 000111 111112223333 344455788
Q ss_pred hhhhhccCCCCcccchhH-HHHHHHHHHHHhhhccccccccccC
Q 013336 363 TAELTADSGGGQGLAIGV-LNLAIVIPQMIVSLGAGPWDALFGG 405 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi-~n~~~~l~qii~~~~~g~l~~~~g~ 405 (445)
+.|..|++ .+|+.+|+ .+....+++.++|.+.|.+.+..|.
T Consensus 337 ~~~~~p~~--~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~ 378 (394)
T TIGR00883 337 LPELFPTE--VRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGD 378 (394)
T ss_pred HHHhCCcc--ceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCc
Confidence 99999986 56777887 5667778999999999999988773
No 42
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.54 E-value=2.1e-13 Score=137.31 Aligned_cols=254 Identities=13% Similarity=0.105 Sum_probs=151.2
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHH
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 121 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f 121 (445)
++..+..++......+..+++.|..|+++|++++++......+|..+|+.+++. +.+. .++|..|
T Consensus 98 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~--l~~~-------------~~~~~~~ 162 (385)
T TIGR00710 98 VLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGY--ILVW-------------LSWHAIF 162 (385)
T ss_pred HHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH-------------cCHHHHH
Confidence 344455666667778899999999999999999999999999999999998875 2221 2578888
Q ss_pred HHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccc
Q 013336 122 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 201 (445)
Q Consensus 122 ~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
.+.+++.+++.++..+..||++....+ ++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------------------------------------------- 191 (385)
T TIGR00710 163 AFLSLAGILLSALIFFILPETLPYEAR-IQ-------------------------------------------------- 191 (385)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccc-CC--------------------------------------------------
Confidence 887776666655555566765321100 00
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhH
Q 013336 202 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 281 (445)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~ 281 (445)
+ +.....+++.+ +. +.++.+.+...+.+.+++.+..+.+.|+.+ .++.++. + .
T Consensus 192 -----~---~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---------~----~ 244 (385)
T TIGR00710 192 -----I---STYFETFLLLL----KS-KMFWGYALIYGASFGGFFAFFSGAPFVYID-IMGVSPS---------V----F 244 (385)
T ss_pred -----H---HHHHHHHHHHH----cC-chhHHHHHHHHHHHHHHHHHHHcChHHHHH-HcCCCHH---------H----H
Confidence 0 00011222222 22 344445555555666666666666665543 2333320 1 2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchh
Q 013336 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVP 359 (445)
Q Consensus 282 g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP 359 (445)
| +....+++...+.+++.+++.||+|+|+....+.+.++++.+.+.+......+.+. .......+.|++ ......
T Consensus 245 g-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~ 321 (385)
T TIGR00710 245 G-LLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWA--MIIGPMMFVGIGNSMISSIA 321 (385)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHH--HHHHHHHHHHHHHHHHHHHH
Confidence 2 22334566777788999999999999999888877777765544433211101110 011112234443 334444
Q ss_pred HHHhhhhhccCCCCcccchhHHHHHHHH-HHHHhhh
Q 013336 360 FAITAELTADSGGGQGLAIGVLNLAIVI-PQMIVSL 394 (445)
Q Consensus 360 ~aLls~~~~~~~~~~G~~~gi~n~~~~l-~qii~~~ 394 (445)
.+...|..|+ .+|+.+++.|...+. +.+.++.
T Consensus 322 ~~~~~~~~~~---~~g~~~~~~~~~~~~~g~i~~~~ 354 (385)
T TIGR00710 322 MAYALEDFPH---VAGTASALFGTLRLVLGAIVGYL 354 (385)
T ss_pred HHHHhccCcc---cchHHHHHHHHHHHHHHHHHHHH
Confidence 4555666553 478889998887765 4444444
No 43
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.54 E-value=2e-14 Score=145.37 Aligned_cols=280 Identities=10% Similarity=0.045 Sum_probs=153.7
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHH
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 124 (445)
.+..++......+..+++.|.+|+++|++++++.....++|.++|+.+++. ..+.. +.++|+.|.+.
T Consensus 108 ~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~--l~~~~-----------~~~w~~~f~~~ 174 (405)
T TIGR00891 108 LVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL--VVPVW-----------GDGWRALFFIS 174 (405)
T ss_pred HHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH--HHHhc-----------CccHHHHHHHH
Confidence 444555566778889999999999999999999999999999999988765 22111 12588999887
Q ss_pred HHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccc
Q 013336 125 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (445)
Q Consensus 125 ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
++..+++.+ ....+||++.+..++++.++. .+..++. .++
T Consensus 175 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-------------------~~~------------ 214 (405)
T TIGR00891 175 ILPIIFALW-LRKNIPEAEDWKEKHAGKALV--------RTMVDIL-------------------YGG------------ 214 (405)
T ss_pred HHHHHHHHH-HHHhCCCChhHHHHhhhhhhh--------hhHHHHH-------------------hcc------------
Confidence 766655543 344567764322111100000 0000000 000
Q ss_pred cCCCCCCCccchHHHHHHHhccC----CHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhh
Q 013336 205 TNGSFNDGPGAVLVNLLTSLRHL----PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 280 (445)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~----P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~ 280 (445)
+. ..+...++.....+.. .+.+..++...++..........+.+.|..+ .++.++ + .
T Consensus 215 --~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~----------~---~ 275 (405)
T TIGR00891 215 --EH---RIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKA-DLGLSP----------H---T 275 (405)
T ss_pred --ch---hhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH-HhCCCH----------H---H
Confidence 00 0000011111111111 1111222222222222223344445555443 222221 0 1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecch
Q 013336 281 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSV 358 (445)
Q Consensus 281 ~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~sv 358 (445)
.+ +....+++...+..++.+++.||+|||+.+.++.+..++......... +... ...+...+.|+. ....+
T Consensus 276 ~~-~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~ 348 (405)
T TIGR00891 276 VA-NIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG----ANVA--VLGLGLFFQQMLVQGIWGI 348 (405)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC----CchH--HHHHHHHHHHHHHccchhh
Confidence 11 223355667778889999999999999998887665533222111111 1110 011111222222 22333
Q ss_pred hHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccC
Q 013336 359 PFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 405 (445)
Q Consensus 359 P~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~ 405 (445)
-.+++.|+.|++ .+|+.+|+.|....++..++|.+.|.+.+..|.
T Consensus 349 ~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~ 393 (405)
T TIGR00891 349 LPKHLGEYFPTD--QRAAGLGFTYQLGNLGGALAPIIGALLAQRLDE 393 (405)
T ss_pred HHHHHhhhCCcc--hhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 457789999875 679999999999999999999999999998873
No 44
>PRK12382 putative transporter; Provisional
Probab=99.54 E-value=3.9e-14 Score=143.89 Aligned_cols=132 Identities=15% Similarity=0.080 Sum_probs=92.7
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAE 365 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~ 365 (445)
.+++...+.+++.+++.||+|+|+....+..+.+++++...+.. +.+ ...+...+.|++ .....-.+.+.+
T Consensus 257 ~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~g~~~~~~~~~~~~~~~~ 329 (392)
T PRK12382 257 AFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP----TAW---VALAGAALTGAGCSLIFPALGVEVVK 329 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc----cHH---HHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 45555667788899999999999999988888877765544332 211 112223334544 222222355667
Q ss_pred hhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 366 LTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 366 ~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
..|++ .+|+.+|+.++...+++.+++.+.|.+.+..|. ...|.+.+++.+++.+...+..+
T Consensus 330 ~~~~~--~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~ 390 (392)
T PRK12382 330 RVPSQ--VRGTALGGYAAFQDIAYGVSGPLAGMLATSFGY--PSVFLAGAISAVLGIIVTILSFR 390 (392)
T ss_pred hcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--hHHHHHHHHHHHHHHHHHHhhcc
Confidence 77664 679999999999999999999999999988775 35788888888888877665443
No 45
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.54 E-value=1.3e-13 Score=140.62 Aligned_cols=292 Identities=13% Similarity=0.039 Sum_probs=165.2
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++.....+...+++.|.+|+|+|++++++.+....+|.++|+.+|+++ .++ .++..+.+.+
T Consensus 97 l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l--~~~--------------~~~~~~~i~~ 160 (393)
T PRK11195 97 LVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL--ADP--------------HAEAALAVCA 160 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH--------------HHHHHHHHHH
Confidence 455666667777899999999999999999999999999999999999872 211 1445555555
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccccc
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 205 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
...+++.+ ....+||+|.+..++ +.+ . +
T Consensus 161 ~~~~~~~~-~~~~l~~~~~~~~~~-~~~-~------------------------------------~------------- 188 (393)
T PRK11195 161 LIYLLAAL-FNLFIPRLGARRPGQ-SWN-P------------------------------------I------------- 188 (393)
T ss_pred HHHHHHHH-HHhcCCCCccccccc-CCC-H------------------------------------H-------------
Confidence 44444332 345678764211100 000 0 0
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHH
Q 013336 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (445)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~ 285 (445)
.....+++-++.+++.| .++...+..++.|.......+..+.|+.+ .++.++. + .| +.
T Consensus 189 ------~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lg~s~~---------~----~G-~~ 246 (393)
T PRK11195 189 ------ALLRDFFHACRVLWRDK-LGRFSLAGTTLFWGAGATLRFLVLAWAPV-ALGITLN---------Q----PA-YL 246 (393)
T ss_pred ------HHHHHHHHHHHHHHhCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChh---------H----HH-HH
Confidence 00001111112223323 33433334444455555555555556644 4554421 1 22 23
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchh-HHHh
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVP-FAIT 363 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP-~aLl 363 (445)
+..+++...+.+++.+++.||.++|++...+. ..+++.....+.. +.+ ...+...+.|++ .....| .+++
T Consensus 247 ~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~----~~~---~~~~~~~~~G~~~g~~~~~~~~~~ 318 (393)
T PRK11195 247 QAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQH----SLL---PAYPLLILIGALGGFFVVPMNALL 318 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHh----HHH---HHHHHHHHHHHhhhhhhhhHHHHH
Confidence 34556677778888999999999888877774 3344333222221 211 122223345554 222233 3444
Q ss_pred hhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhe-eccCCCCCCccc
Q 013336 364 AELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL-KLPHLSSNSFRS 439 (445)
Q Consensus 364 s~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~-~vpe~~~~~~~~ 439 (445)
.+ .++++.++|...|+.|+...+++.++..+++.+ +..|-. +.+++.++..+++..+.+. .-.|.+-|.|.|
T Consensus 319 q~-~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK11195 319 QH-RGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVP--VVAVIVGFGLLVALAMALLWRWHRRNQRQFDS 391 (393)
T ss_pred Hh-hCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCC--HHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 44 344323479999999999999999999888855 445543 4555555555555555543 345666676654
No 46
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.54 E-value=1.9e-14 Score=143.79 Aligned_cols=285 Identities=11% Similarity=0.044 Sum_probs=161.1
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHh-ccccccchhhhhhcccchhhhccccchhHH
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGF-SAGASGSWHRWFPFLTSRACCAACGNLKAA 120 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~-~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (445)
++..+..++.....++..+++.|..|+++|++++++......+|..+|+ .++.. ..+. .++++.
T Consensus 88 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-------------~~~~~~ 152 (379)
T TIGR00881 88 ALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFG--IAEL-------------YSWHWV 152 (379)
T ss_pred HHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHH--HHhc-------------CCchhH
Confidence 3444456666777888999999999999999999999999999999998 45543 1111 257888
Q ss_pred HHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccc
Q 013336 121 FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISK 200 (445)
Q Consensus 121 f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (445)
|++.+++.++..++.++..||+|.....++. ++. + + ++.+++.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-------~---------------------~~~~~~~~~----- 197 (379)
T TIGR00881 153 FIVPGIIAIIVSLICFLLLRDSPQSCGLPPA-EEM-P-------N---------------------EEPDGDAEK----- 197 (379)
T ss_pred HHHHHHHHHHHHHHHheeeCCCccccccCcc-ccC-c-------c---------------------ccccccccc-----
Confidence 8887766666656666778887543211110 000 0 0 000000000
Q ss_pred cccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhh
Q 013336 201 KAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 280 (445)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~ 280 (445)
+ + +.....+..++.+.+. +.++.+++..++.+.....+..|.+.|+.+ .++.++ +
T Consensus 198 --~---~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~----------~---- 252 (379)
T TIGR00881 198 --K---E----EELTKKQIFLQYVLLN-KVLWYISLGYVFVYVVRTGILDWSPLYLTQ-EKGFSK----------E---- 252 (379)
T ss_pred --c---c----ccccchHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCH----------H----
Confidence 0 0 0000111112222222 456667777777777777777778877765 333331 1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecch
Q 013336 281 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSV 358 (445)
Q Consensus 281 ~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~sv 358 (445)
...+....+++...+..++.+++.||..+|+.........+................. ........+.|+. .....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~ 330 (379)
T TIGR00881 253 KASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANP--LMDLICLFALGFLVYGPQML 330 (379)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhH--HHHHHHHHHHHHHHhhhhHH
Confidence 1112334556667777888999999864333222222222211111111111000111 0111112223332 22233
Q ss_pred hHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccC
Q 013336 359 PFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 405 (445)
Q Consensus 359 P~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~ 405 (445)
.++++.|..|++ .+|+.+|+.|....+++.+++.+.|.+.+..|.
T Consensus 331 ~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 375 (379)
T TIGR00881 331 IGVIASELAPKK--AAGTAAGFVGFFAYLGGILAGLPLGYLADGFGW 375 (379)
T ss_pred HHHHHHHhcCcc--hhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcc
Confidence 356778888875 679999999999999999999999999887764
No 47
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.54 E-value=4.8e-14 Score=144.64 Aligned_cols=293 Identities=13% Similarity=0.063 Sum_probs=160.3
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHH
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 124 (445)
.+..++.....++..+++.|..|+++|++++++.....++|.++++.++.. +.+. .++|+.|++.
T Consensus 114 ~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~--l~~~-------------~~w~~~f~i~ 178 (426)
T PRK12307 114 FIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPS--FAEA-------------YGWRAAFFVG 178 (426)
T ss_pred HHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHH--Hccc-------------CCHHHHHHHH
Confidence 344555556777889999999999999999999999999999998876643 1111 2688888876
Q ss_pred HHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccc
Q 013336 125 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (445)
Q Consensus 125 ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
++..++...+ ....||++.+..++. +++ .+ ..
T Consensus 179 ~~~~~~~~~~-~~~~p~~~~~~~~~~--~~~--------------~~-----------------------------~~-- 210 (426)
T PRK12307 179 LLPVLLVIYI-RARAPESKEWEEAKL--SGK--------------GK-----------------------------HS-- 210 (426)
T ss_pred HHHHHHHHHH-HHHCCCChHHHHhhh--hcc--------------cc-----------------------------cc--
Confidence 5543332221 111233221100000 000 00 00
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHHH---HHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhH
Q 013336 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVV---LIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 281 (445)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l---~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~ 281 (445)
+...+.....++++++. |+ ++.. +...+..+.+.+.+..+.+.|+.+ .+.++ + ..
T Consensus 211 --~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~----------~---~~ 268 (426)
T PRK12307 211 --QSAWSVFSLSMKGLFNR----AQ-FPLTLCVFIVLFSIFGANWPIFGLLPTYLAG--EGFDT----------G---VV 268 (426)
T ss_pred --ccchhhhhHHHHHHHhh----ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCH----------H---HH
Confidence 00000011123433332 22 2221 222222222333344556666654 12221 1 11
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc----eecc
Q 013336 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK----ITYS 357 (445)
Q Consensus 282 g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~----~~~s 357 (445)
+ ..+..+++...+..++.+++.||+|||+++..+.++.++.++....... +.+ ..+...++|+. ....
T Consensus 269 ~-~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~ 340 (426)
T PRK12307 269 S-NLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQ---DNY----LLLGACLFGLMATNVGVGG 340 (426)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcc---ccH----HHHHHHHHHHHHhcccHhH
Confidence 1 2334556667777889999999999999998887776655443322210 111 11111222221 1122
Q ss_pred hhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 358 VPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 358 vP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
+..+++.|..|++ .+|+.+|+.+....++++++|.+.|.+.+..|.. ...+...++.++++.....+..|++.
T Consensus 341 ~~~~~~~~~~p~~--~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (426)
T PRK12307 341 LVPKFLYDYFPLE--VRGLGTGLIYNLAATSGTFNSMAATWLGITMGLG-AALTFIVAFWTATILLIIGLSIPDRL 413 (426)
T ss_pred HHHHHHHHhCcHH--HHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHH-HHHHHHHHHHHHHHHhhccccCChhh
Confidence 3346778888875 6799999999999999999999999998887743 22333444334444444445567653
No 48
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.54 E-value=1.5e-13 Score=138.34 Aligned_cols=286 Identities=14% Similarity=0.067 Sum_probs=155.4
Q ss_pred HHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHH
Q 013336 44 FWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLV 123 (445)
Q Consensus 44 ~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i 123 (445)
..+..++......+..+++.|..|+++|+++.++......+|..+|+.+++. ..+. .++++.|++
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--l~~~-------------~~~~~~~~~ 150 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGW--LLVW-------------FSWHAIFWV 150 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH-------------cChHHHHHH
Confidence 3444555556667889999999999999999999999999999999988875 2221 257888888
Q ss_pred HHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccc
Q 013336 124 AVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAE 203 (445)
Q Consensus 124 ~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (445)
.+++.++..++..+..||++..+++ ++ . +.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~--------------------------------------------~~-- 180 (377)
T PRK11102 151 LALAAILAAALVFFFIPETLPKERR-QP---F--------------------------------------------HL-- 180 (377)
T ss_pred HHHHHHHHHHHHHHhCCccCccccc-CC---C--------------------------------------------Ch--
Confidence 7777666666666667775421100 00 0 00
Q ss_pred ccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHH
Q 013336 204 DTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGA 283 (445)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~ 283 (445)
++...++++. .+. +.+...++..++.+.+.+.+..+.+.+..+ .++.++. + .|
T Consensus 181 -------~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~---------~----~g- 233 (377)
T PRK11102 181 -------RTTIRNFASL----FRH-KRVLGYMLASGFSFAGMFSFLTAGPFVYIE-LNGVSPQ---------N----FG- 233 (377)
T ss_pred -------HHHHHHHHHH----HcC-hHHHHHHHHHHHHHHHHHHHHHcCHHHHHH-HhCCCHH---------H----HH-
Confidence 0011122222 222 334555666666666666666555544433 2332210 1 12
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+++...+.+++.+++.||+|+|+++.++..+..++.+......... .... ...+...+.+.. .......+
T Consensus 234 ~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~ 310 (377)
T PRK11102 234 YYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLD-LGFW--ALVVGVAAFVGCVSMISSNAMA 310 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHH--HHHHHHHHHHHHHHHhhHHHHH
Confidence 233355667777889999999999999999887766544322222221110 1110 011111111111 22222234
Q ss_pred HhhhhhccCCCCcccchhHHHHHH-HHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAI-VIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~-~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
.+.+..|+ .+|...++.|... .+++++++.+.+...+ .....+...+++.+++.++.++..++
T Consensus 311 ~~~~~~~~---~~g~~~~~~~~~~~~~g~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (377)
T PRK11102 311 VILDEFPH---MAGTASSLAGTLRFGIGAIVGALLSLAPFT----SAWPMVWSMAFCSILSILFYLYASRP 374 (377)
T ss_pred HHhccccc---cchHHHHHHHHHHHHHHHHHHHHHHhccCC----ChHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44454443 5688888877653 4666666665432221 11223344444445444444444443
No 49
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.54 E-value=1.2e-13 Score=140.74 Aligned_cols=266 Identities=12% Similarity=0.093 Sum_probs=151.7
Q ss_pred hhhHHHHhcCCCccch--hhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHh
Q 013336 56 GPARALLADLSGPDQR--NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (445)
Q Consensus 56 ~p~~A~i~D~~p~~qr--~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~ 133 (445)
+...+++.|..|+++| +..+++.....++|.++|+.+++. +.+. .++|..|++.++..++..+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~--l~~~-------------~gw~~~f~~~~~~~~~~~~ 188 (393)
T PRK15011 124 PQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYA--LAMG-------------FSFTVMYLSAAVAFIVCGV 188 (393)
T ss_pred HHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHH--HHHh-------------cChHHHHHHHHHHHHHHHH
Confidence 3455677777766555 344577788889999999999986 3222 2689999888777666666
Q ss_pred heeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCc
Q 013336 134 VTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGP 213 (445)
Q Consensus 134 ~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (445)
+..+.+||.+..+.++++ .
T Consensus 189 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------------~ 207 (393)
T PRK15011 189 MVWLFLPSMRKELPLATG-------------------------------------------------------------T 207 (393)
T ss_pred HHHhhcCccCCCCccccc-------------------------------------------------------------c
Confidence 666677886421110000 0
Q ss_pred cchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHH
Q 013336 214 GAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVL 293 (445)
Q Consensus 214 ~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~ 293 (445)
.+.. ++.|+.......+.++.|.....+..+.+.|+.+ .++-++ .+ .| +......+..
T Consensus 208 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~~~~~---------~~----~g-~~~~~~~~~~ 265 (393)
T PRK15011 208 LEAP-------RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIIN-ELHLPE---------KL----AG-VMMGTAAGLE 265 (393)
T ss_pred cccc-------ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCH---------HH----HH-HHHHHHHHHH
Confidence 0000 0112222233333444444444444455555544 233221 11 12 1122233445
Q ss_pred HHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCC
Q 013336 294 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSG 371 (445)
Q Consensus 294 ~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~ 371 (445)
.+..++.+++.||+|+|+....+.+...+.+....+.. +.+ ..++...+.++. .....-.+...|..|+
T Consensus 266 i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-- 336 (393)
T PRK15011 266 IPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH----SPA---ILLGLQLLNAIYIGILGGIGMLYFQDLMPG-- 336 (393)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh----hHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--
Confidence 56678899999999999988776655554433322221 211 111111111111 1112223445677764
Q ss_pred CCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 372 GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 372 ~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
.+|+.++++|....+++.+++.++|.+.+..|.. .+|.+.+++.+++.+ .++++||+
T Consensus 337 -~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~--~~~~~~~~~~~~~~~-~~~~~~~~ 393 (393)
T PRK15011 337 -QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYH--AVFWFALVMIIATLF-CLLRIKDV 393 (393)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHHHHH-HHHhhcCC
Confidence 4789999999999999999999999998877643 467777777776655 44566764
No 50
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.53 E-value=6.7e-14 Score=160.99 Aligned_cols=297 Identities=12% Similarity=0.048 Sum_probs=166.3
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
..++.....++..+++.|.+|+++|++++++.+....+|.++|+.+|+++ ...+. +...... ....+.+.+.++
T Consensus 113 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l--~~~~~---~~~~~~~-~~~~~~~~~~~~ 186 (1146)
T PRK08633 113 LGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL--FESVN---GNTPSEI-LGRIAPAGLVLL 186 (1146)
T ss_pred HHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH--HHhhc---ccccccc-ccchHHHHHHHH
Confidence 34445556677889999999999999999999999999999999999862 21100 0000000 112333333333
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
...+..++..+.+||.|....++.+ +.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------------------------------------------- 213 (1146)
T PRK08633 187 AVAVLGLIFAYRLPKVPAAAPEVFD--KK--------------------------------------------------- 213 (1146)
T ss_pred HHHHHHHHHHhcCcCCCCCCccccc--cc---------------------------------------------------
Confidence 2223333344456776532211100 00
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH
Q 013336 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l 286 (445)
+ .......++-++.+++. +.++...+..++.|+....+..+++.|+.+ .++.++ . ...| +.+
T Consensus 214 ~---~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~----------~--~~~g-~~~ 275 (1146)
T PRK08633 214 K---YLFPKLLWRNLKLLRSD-RVLWLAIIGLSYFWFISQLAQANFPAYAKE-VLGLDN----------T--FQVQ-YLL 275 (1146)
T ss_pred c---cccHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HhCCCc----------H--HHHH-HHH
Confidence 0 00111122223333332 445555555566666555566666666554 333321 0 0112 333
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
...++..++.+++.+++.||+++|+++.++.++++++++.+.+.. +.+ ..++...++|++ .....-++++.
T Consensus 276 ~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~~~~~~~ 348 (1146)
T PRK08633 276 AASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP----SLA---SVLVLFFLFGFSAGLFIVPLNALIQ 348 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh----hHH---HHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 455667777889999999999999988888887777665544432 211 122223345544 22333467777
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
+..|++ .+|+.+|+.|+...++.++++.+++.+.. .+......+.+.+++.++..++..+.+|
T Consensus 349 ~~~p~~--~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (1146)
T PRK08633 349 FRAPEK--ELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALVTLIGTLYTLLLLP 411 (1146)
T ss_pred hcCCcc--chhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 777775 67999999999999999888776655543 3322223455555555544444433333
No 51
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.52 E-value=3e-13 Score=138.22 Aligned_cols=176 Identities=13% Similarity=0.037 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
|.++..++..++...+.+.+..|.+.|+.+ ++-++. + .+ +......+...+.+.+.+++.||++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~---------~----~~-~~~~~~~~~~~ig~~~~g~l~dr~~ 285 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVAE--LGFSTS---------E----WL-QIWGTFFFTNIVFNVIFGIVGDKLG 285 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCChh---------H----HH-HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 345555666666666777778888888754 333321 1 11 2223445667788889999999999
Q ss_pred chhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhhhccCCCCcccchhHHHHHHH
Q 013336 309 SRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAELTADSGGGQGLAIGVLNLAIV 386 (445)
Q Consensus 309 ~r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~ 386 (445)
||+... .+.+..+++.+...+......+... ...+...+.|+. .......+++.+..| + ++|+.+|+.|....
T Consensus 286 ~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~--~~g~~~g~~~~~~~ 360 (402)
T TIGR00897 286 WMNTVRWFGGVGCGIFTLALYYIPQHFGHSFA--VALIIAIALGIFLAGYVPLAAVFPTLAP-K--HKGAAMSVLNLSAG 360 (402)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHccCCcHH--HHHHHHHHHHHHHHHHHHHHHHHHhhCc-c--hhHHHHHHHHHHHH
Confidence 988764 3444444433322222211001110 111122234443 111111344455433 3 57999999999999
Q ss_pred HHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhe
Q 013336 387 IPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 427 (445)
Q Consensus 387 l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~ 427 (445)
++++++|.+.|.+.+..|. ..++++.+++.+++++...|
T Consensus 361 lg~~~gp~i~g~l~~~~g~--~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 361 LSAFLAPAIAVLFIGFFGA--IGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHhhcch--HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998874 35788888888887776653
No 52
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.52 E-value=1e-13 Score=141.10 Aligned_cols=137 Identities=16% Similarity=0.128 Sum_probs=93.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+++...+..++.+++.||+++|+....+.++++++++...+.. +.+ ...+...+.|++ .....-.+.+.
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~G~~~~~~~~~~~~~~~ 328 (399)
T PRK05122 256 TLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP----SPW---MALIGAALTGFGFSLVFPALGVEAV 328 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 345556666778899999999999998888888777765544432 222 122223345544 22222234556
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCC
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSN 435 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~ 435 (445)
+..|++ .+|+.+|++|....+++.+++.+.|.+.+..|. ...|.+.+++.+++.++.. +.++.++|
T Consensus 329 ~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 394 (399)
T PRK05122 329 KRVPPQ--NRGAALGAYSVFLDLSLGITGPLAGLVASWFGY--PSIFLAAALAALLGLALTW-LLYRRAPR 394 (399)
T ss_pred HhCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHH-Hhcccccc
Confidence 777764 679999999999999999999999998887774 3577888888787766654 45555554
No 53
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.52 E-value=1.2e-13 Score=140.17 Aligned_cols=273 Identities=15% Similarity=0.117 Sum_probs=156.1
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
..++.....+...+++.|..|+++|++++++......+|..+|+.+++. ..+. .++|+.|.+.++
T Consensus 101 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~--l~~~-------------~gwr~~f~~~~~ 165 (382)
T PRK10091 101 SGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTY--LSQE-------------FSWRYTFLLIAV 165 (382)
T ss_pred HHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHH--Hhhh-------------ccHHHHHHHHHH
Confidence 4444444556678889999999999999999999999999999988765 2111 268999998877
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
+.++..+.....+||.+. ++++
T Consensus 166 ~~~~~~~~~~~~lp~~~~---~~~~------------------------------------------------------- 187 (382)
T PRK10091 166 FNIAVLASIYFWVPDIRD---EAKG------------------------------------------------------- 187 (382)
T ss_pred HHHHHHHHHHHhCCCCCc---cccc-------------------------------------------------------
Confidence 666655555555677431 0000
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH
Q 013336 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l 286 (445)
+.++. ++.+++ |+ .+.+....++...+.+....|.+.|+.+ .++.+++ ...+..
T Consensus 188 -----~~~~~----~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~--------------~~~~~~ 241 (382)
T PRK10091 188 -----GLREQ----FHFLRS-PA-PWLIFAATMFGNAGVFAWFSYIKPYMMF-ISGFSET--------------SMTFIM 241 (382)
T ss_pred -----CHHHH----HHHhcC-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH--------------HHHHHH
Confidence 00011 112222 22 2333333444444444444454544443 3333321 122334
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchh-HHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVP-FAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP-~aLls 364 (445)
...++...+..++.+++.||+|+|++...+..+++++++.+.... +.+. ...+...+.+++ .....| .....
T Consensus 242 ~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~ 315 (382)
T PRK10091 242 MLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG----GMKT--ASLIFAFICCAGLFALSAPLQILLL 315 (382)
T ss_pred HHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH----hhHH--HHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 456677788899999999999999999988888877765443332 1110 111111222222 111112 12222
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhee
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~ 428 (445)
+..++. +..|. +..++...+++.++|.++|.+.+..++. .+++.+.++.++++..+....
T Consensus 316 ~~~~~~-~~~~~--~~~~~~~~~g~~~Gp~~~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 316 QNAKGG-ELLGA--AGGQIAFNLGSAIGAYCGGMMLTLGLAY-NYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HhCCcc-hHHHH--HHHHHHHHHHHHHHHHHhHHHHHcccCc-chHHHHHHHHHHHHHHHHHHH
Confidence 222221 23444 3457888999999999999998865433 356776666666655544433
No 54
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.50 E-value=2.7e-13 Score=138.30 Aligned_cols=269 Identities=15% Similarity=0.117 Sum_probs=156.8
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
..++.....+...+++.|.+|+++|++++++.....++|.++|+.+++. +.+. .++|+.|++.++
T Consensus 118 ~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~--l~~~-------------~gw~~~f~~~~~ 182 (394)
T PRK10213 118 LGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSF--LGEL-------------IGWRNVFNAAAV 182 (394)
T ss_pred HHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhh-------------cCHHHHHHHHHH
Confidence 4555556677889999999999999999999999999999999999986 2222 258889988776
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
+.+++.++....+||+|. ++++
T Consensus 183 l~~~~~l~~~~~~p~~~~---~~~~------------------------------------------------------- 204 (394)
T PRK10213 183 MGVLCIFWIIKSLPSLPG---EPSH------------------------------------------------------- 204 (394)
T ss_pred HHHHHHHHHHHHCCCCCc---cccc-------------------------------------------------------
Confidence 665555443334565421 0000
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhcc-ccccceeeecCCCCCCChhhHHHHHHhhHHHHH
Q 013336 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFD-TDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~-t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~ 285 (445)
...+.++.+ ++ |.++...+..++...+.+.+..|. +.|..+ ++.++. + .| ..
T Consensus 205 ------~~~~~~~~l---~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~---------~----~g-~~ 257 (394)
T PRK10213 205 ------QKQNTFRLL---QR--PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNL--AGFGVD---------G----LT-LV 257 (394)
T ss_pred ------chhHHHHHh---cC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCChh---------H----HH-HH
Confidence 001122222 22 344444444444444444444454 333322 333321 1 12 23
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHh
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAIT 363 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLl 363 (445)
+..+++.+.+.+++.+++.||.+ |+.++.+.++..++.+....... +.+ .......+.|++ ..+..-.+++
T Consensus 258 ~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~---~~~---~~~~~~~l~G~~~~~~~~~~~~~~ 330 (394)
T PRK10213 258 LLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGS---DKI---VATGVAIIWGLTFALVPVGWSTWI 330 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhh---hHH---HHHHHHHHHHHHHHhhhHHHHHHH
Confidence 34456667777888999999954 44444433333333222222210 211 112223334544 3343334567
Q ss_pred hhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhe
Q 013336 364 AELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 427 (445)
Q Consensus 364 s~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~ 427 (445)
.+..|+ +.+...++......+++.+++.++|.+.+..|.. ..+..++++.++.++.+.-
T Consensus 331 ~~~~~~---~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~--~~~~~~~~~~~~~~~~~~~ 389 (394)
T PRK10213 331 TRSLAD---QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLT--SPLMLSGTLMLLTALLVTA 389 (394)
T ss_pred HHHCcc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChh--hHHHHHHHHHHHHHHHHHH
Confidence 777764 3456667778888999999999999999987753 4677777666666665543
No 55
>PRK15075 citrate-proton symporter; Provisional
Probab=99.49 E-value=3.2e-13 Score=139.43 Aligned_cols=266 Identities=11% Similarity=0.072 Sum_probs=140.0
Q ss_pred hccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHH
Q 013336 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (445)
Q Consensus 48 d~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~ 127 (445)
.++.....++..++++|..|+++|+++.++......+|..+|..+|... ...+. ... ....+||++|++.++.
T Consensus 128 G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l--~~~~~---~~~--~~~~gWr~~f~~~~~~ 200 (434)
T PRK15075 128 GFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLL--NQWLS---PAQ--MAEWGWRIPFLIGCLI 200 (434)
T ss_pred hccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHH--HHhCC---HHH--HhccchHHHHHHHHHH
Confidence 3333344566889999999999999999999988888888887777652 11110 000 0013689999876544
Q ss_pred HHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCC
Q 013336 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (445)
Q Consensus 128 ~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (445)
..+... .....||++... +++ + +
T Consensus 201 ~~~~~~-~~~~~~e~~~~~-~~~----------------------------------------------------~---~ 223 (434)
T PRK15075 201 VPFIFL-IRRSLEETEEFL-ARK----------------------------------------------------H---R 223 (434)
T ss_pred HHHHHH-HHHhcCCCHHHH-Hhh----------------------------------------------------h---c
Confidence 322211 111112211000 000 0 0
Q ss_pred CCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHH
Q 013336 208 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (445)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~ 287 (445)
.+.++.++...+.++.....++..++...+++.+..|.++|+.+ .++-++ ++ .+ +...
T Consensus 224 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~----------~~---~~-~~~~ 281 (434)
T PRK15075 224 -------PSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKT-VLHLSA----------AD---SL-LVTL 281 (434)
T ss_pred -------cccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH----------HH---HH-HHHH
Confidence 00111122221112222222334444555666777888887765 333321 11 11 2334
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHH-HHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMA-TTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
++++.+.+.+.+.+++.||+|||++.+.+.+..++... ........ +... .......+.|+. ......++++.
T Consensus 282 ~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~ 357 (434)
T PRK15075 282 CVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA--PSFA--RMLAVELWLSFLYGSYNGAMVVALT 357 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC--CchH--HHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 55666777888899999999999988876544432211 11111100 1110 011111112222 33333456788
Q ss_pred hhhccCCCCcccchhHH-HHHHHHHHHHhhhccccccccccC
Q 013336 365 ELTADSGGGQGLAIGVL-NLAIVIPQMIVSLGAGPWDALFGG 405 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~-n~~~~l~qii~~~~~g~l~~~~g~ 405 (445)
|..|++ .+|+.+|+. |+...+...++|.+.|.+.+..|.
T Consensus 358 e~~p~~--~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 358 EVMPAE--VRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHCCCC--ccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 999986 457777885 444445566788888888888774
No 56
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.49 E-value=4.3e-13 Score=137.67 Aligned_cols=301 Identities=14% Similarity=0.075 Sum_probs=166.4
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++.....+...+++.|..|+++|+++.++.....++|.++|+.+++.+ .. . +...+ ..++|+.|++.+
T Consensus 105 l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l-~~-~-~~~~~------~~gwr~~f~~~~ 175 (412)
T TIGR02332 105 LVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYI-LA-L-DGLMA------LKGWQWLFLLEG 175 (412)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-C-CCCCC------ccchhHHHHHHH
Confidence 344444455566778999999999999999999999999999999988752 11 0 00000 126899999977
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccc-cCCCCCCCCCCCCCCccCCcccchhhhhccccccc
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISK-SKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
++.++..++..+++||+|.... .+++ ++.+...+ .+.+ ..+.+ ..+
T Consensus 176 ~~~l~~~~~~~~~~~~~p~~~~---~l~~-------~~~~~~~~~~~~~------------~~~~~----------~~~- 222 (412)
T TIGR02332 176 FPSVILGVMTWFWLDDSPDKAK---WLDE-------EDKKALKEMIDND------------QLTLE----------QPE- 222 (412)
T ss_pred HHHHHHHHHHhhccCCCcccCC---CCCH-------HHHHHHHHHHHhc------------ccccc----------ccc-
Confidence 7665555556677899874210 0000 00000000 0000 00000 000
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHH
Q 013336 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (445)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~ 284 (445)
+.. .......++.++.+++ +.++...+..++...+.+.+..|.+.|+.+..++-++ . ..+ .
T Consensus 223 --~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~----------~---~~~-~ 283 (412)
T TIGR02332 223 --GAF-AHAAMPQRSMLREIFT--PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSN----------I---MIG-L 283 (412)
T ss_pred --ccc-ccccccHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH----------H---HhH-H
Confidence 000 0011122334455543 3456666667777777778888888888651111111 0 122 2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhH-HHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccce--ecchhHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVW-AISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKI--TYSVPFA 361 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~-~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~--~~svP~a 361 (445)
......+...+..++.+++.||+++|+.. +...++.+++++. .. . .. +.. .......+.+++. ...+.++
T Consensus 284 ~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~-~~-~-~~-~~~---~~~~~~~~~~~g~~~~~~~~~~ 356 (412)
T TIGR02332 284 LAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLL-AS-A-TD-HNL---IQLLGIIMASMGSFSAMAIFWT 356 (412)
T ss_pred HhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHH-HH-h-cC-CHH---HHHHHHHHHHHHhhhhhhHHHh
Confidence 23455666777788999999999988753 3444444433221 11 1 10 111 1111111112221 1122223
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHH
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLS 417 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~ 417 (445)
...+..|++ .+|+.+|+.|....++++++|.+.|.+.+..|+. ...+.+++++
T Consensus 357 ~~~~~~~~~--~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~-~~~~~~~~~~ 409 (412)
T TIGR02332 357 TPDQSISLQ--ARAIAIAVINATGNIGSALSPFLIGILKDATGSF-NSGLWFVAAL 409 (412)
T ss_pred hcccccchH--HHHHHHHHHHHhhhhhhhhhhhhcccccccCCCC-chhHHHHHHH
Confidence 334556654 6799999999999999999999999999987753 3455555543
No 57
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.48 E-value=3.6e-13 Score=141.72 Aligned_cols=285 Identities=18% Similarity=0.156 Sum_probs=179.9
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
+.++.....+...|++.|++|+||..+++++.+...++..++|+.+|+++ -..+ ...+.|.+.++
T Consensus 113 ~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~L--va~~-------------G~~~~f~inal 177 (524)
T PF05977_consen 113 LGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGIL--VAFF-------------GAAAAFLINAL 177 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHH--HHHH-------------HHHHHHHHHHH
Confidence 44444445566899999999999999999999999999999999999973 2222 34667877776
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
.+++... .+...|.++ ++++.+ .
T Consensus 178 sfl~~i~-~l~~~~~~~----~~~~~~------------------------------------------------~---- 200 (524)
T PF05977_consen 178 SFLISIL-ALLRWKPPP----PPSSLP------------------------------------------------R---- 200 (524)
T ss_pred HHHHHHH-HHHHccccc----cccccc------------------------------------------------h----
Confidence 6555443 233333221 100000 0
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH
Q 013336 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l 286 (445)
| .....+++-++-+++.| .++.+.+..++..+...++....+.++.+ .+++++. .-|. .+
T Consensus 201 e----~~~~~l~~G~ryv~~~~-~l~~~l~~~~~~~l~~~a~~aLlPl~a~~-~l~~~a~---------~yGl-----l~ 260 (524)
T PF05977_consen 201 E----RFFSALREGLRYVRSSP-PLRSVLLRSFLFNLFASAVWALLPLFARD-VLGGGAS---------GYGL-----LL 260 (524)
T ss_pred h----hhhhhHHHHHHHHhcch-HHHHHHHHHHHHHHhhhHHHHhhhHHHHH-HhCCcHH---------HHHH-----HH
Confidence 0 11234566666665544 45555444333333223333334544444 4555421 1122 22
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+++.+++.+++.+++.+|++++++...+.++++++++.+++.. +.+ ...+...+.|++ ..++.-.+++-
T Consensus 261 a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~----~~~---~~~~~l~l~G~~~~~~~~~~~t~~Q 333 (524)
T PF05977_consen 261 AAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP----SFW---LALIALFLAGAAWIIANSSLNTLVQ 333 (524)
T ss_pred HHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch----HHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788899999999999999999999999988877666654 322 233334456655 22222235555
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhh-eeccCCCC
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT-LKLPHLSS 434 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~-~~vpe~~~ 434 (445)
+..|++ -+|+.++++++....++.+++++.|.+.+..|-. .++.++++..++++++.. ..+|+.+.
T Consensus 334 ~~~P~~--~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~--~al~~a~~~lll~~~~~~~~~l~~~~~ 400 (524)
T PF05977_consen 334 LSVPDW--VRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVR--TALLIAGAALLLSALIALRFPLRQGEE 400 (524)
T ss_pred HhCCHH--HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 666765 5799999999999999999999999999988754 456677776666655554 34666554
No 58
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.48 E-value=1.6e-13 Score=143.08 Aligned_cols=298 Identities=9% Similarity=0.078 Sum_probs=168.0
Q ss_pred hccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHH
Q 013336 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (445)
Q Consensus 48 d~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~ 127 (445)
.++.....++..+++.|..|+++|++++++.....++|.++|..+.... +...+ ..+++..|.+.+++
T Consensus 133 G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~-~~~~~-----------~~~~~~~f~~~g~~ 200 (467)
T PRK09556 133 GFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG-ANYFF-----------DGHVIGMFIFPSII 200 (467)
T ss_pred HHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH-HHhhc-----------cCcchhHHHHHHHH
Confidence 3444455677889999999999999999999999999999988776531 22111 12467777775554
Q ss_pred HHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCC
Q 013336 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (445)
Q Consensus 128 ~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (445)
.++..++..+.+||+|......+. ++ ..++ ..+++ .+ +++
T Consensus 201 ~~~~~i~~~~~~~~~p~~~~~~~~--~~--~~~~--------------------------~~~~~---------~~-~~~ 240 (467)
T PRK09556 201 ALIIGFIGLRYGSDSPEELGWGKA--EE--IFGE--------------------------PISEE---------DK-ETE 240 (467)
T ss_pred HHHHHHHHHHhCCCChhhcCCCCh--hh--cccC--------------------------ccchh---------hh-ccc
Confidence 444434444456665522111000 00 0000 00000 00 000
Q ss_pred CCCCCccchHHHH-HHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH
Q 013336 208 SFNDGPGAVLVNL-LTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (445)
Q Consensus 208 ~~~~~~~~~~~~~-~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l 286 (445)
..+.+.++. .+...+. +.++.+++..++.......+..+.+.|+.+ .++-++. + . .+..
T Consensus 241 ----~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~-~~g~s~~---------~----a-~~~~ 300 (467)
T PRK09556 241 ----STDMTKWQIFVEYVLKN-PVIWLLCFANIFLYIVRIGIDNWSPVYAFQ-ELGFSKE---------D----A-INTF 300 (467)
T ss_pred ----cccCcHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCCHH---------H----H-HHHH
Confidence 000111221 1212222 456667777777777777777788888765 4554421 1 1 1333
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccce--ecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKI--TYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~--~~svP~aLls 364 (445)
....+...+..++.+++.||+++|+..+.+..+..++.....+ . ...+.+ ...+...+.|+.. .....++...
T Consensus 301 ~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~---~~~~~~~~~G~~~~~~~~~~~~~~~ 375 (467)
T PRK09556 301 TLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVY-Q-HATSEY---MYLASLFALGFLVFGPQLLIGVAAV 375 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH-H-hcCcHH---HHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 4456667788999999999999998776654443332221111 1 110111 1112222344321 1111234566
Q ss_pred hhhccCCCCcccchhHHHHHHHH-HHHHhhhccccccc------------cccCcchhHHHHHHHHHHHHHHhhh
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVI-PQMIVSLGAGPWDA------------LFGGGNIPAFVLASLSALAGGVVAT 426 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l-~qii~~~~~g~l~~------------~~g~~~~~~f~~~~v~~ll~~~~~~ 426 (445)
|..|++ .+|+..|+.|...++ +.++++.+.|.+.+ ..| +...|.+..++++++.++..
T Consensus 376 ~~~p~~--~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~--~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 376 GFVPKK--AIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTG--WAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred hhcchh--hHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccC--hHHHHHHHHHHHHHHHHHHH
Confidence 888875 679999999999996 87999999999888 333 24567777777777766554
No 59
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.47 E-value=4.3e-14 Score=140.03 Aligned_cols=258 Identities=19% Similarity=0.239 Sum_probs=155.8
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHH
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 124 (445)
.+..++.....+...+++.|..|+++|++++++......+|.++|+.+++.+ .+. .++|+.|++.
T Consensus 93 ~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l--~~~-------------~~~~~~~~~~ 157 (352)
T PF07690_consen 93 FLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFL--ISY-------------FGWRWAFLIS 157 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CCH-------------CHHCCHHHHH
T ss_pred cccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhh--hhc-------------cccccccccc
Confidence 3445555567788999999999999999999999999999999999998863 111 2588899998
Q ss_pred HHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccc
Q 013336 125 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (445)
Q Consensus 125 ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
+++.+++.++..++.+|+|....++++.+++ +... +
T Consensus 158 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~-------~- 193 (352)
T PF07690_consen 158 AILSLIAAILFILFLPEPPPPRERESPKESE------------------------------------SKKP-------K- 193 (352)
T ss_dssp HHHHHHHHHHHHCCC---STTTT--SSTTTT--------------------------------------HH-------H-
T ss_pred cchhhhhhhhHhhhhhhcccccccccccccc------------------------------------cccc-------c-
Confidence 8888777665445666654332222110000 0000 0
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHH
Q 013336 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (445)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~ 284 (445)
.....++.+.+. +.++.+.+..+...+.+..+..+.+.|+.+ .++.+ |.....+
T Consensus 194 -------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-------------~~~~~~~ 247 (352)
T PF07690_consen 194 -------PLKPGFKSLFKN-----PVLWILLIAFFLFFFVFSGFSFFLPLYLQE-VLGFS-------------GPSQAGL 247 (352)
T ss_dssp -------CCCH-CTHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHCC-------------THHHHHH
T ss_pred -------cccccccccccc-----chhhhhhhhhhHHHHHHHHhhcccchhhhh-ccCCC-------------HHHHHHH
Confidence 000112222222 223323334444444666677777766544 33332 0111112
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
.+.+.++...+.+++.+++.||+++|+...+......++.+...+..... +.. .......+.|++ .....-.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~g~~~~~~~~~~~~~ 323 (352)
T PF07690_consen 248 LFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSS-SPV---WLIIALFLIGFGFGIVFPILFSL 323 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHC-HHH---HHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhh-hHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 23455666777788999999999998887776666666555444433221 111 112223345554 445555788
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhh
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVS 393 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~ 393 (445)
+.+..|++ .+|+.+|+.|+...++.+++|
T Consensus 324 ~~~~~~~~--~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 324 IQELVPPE--YRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHCCCHTC--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHH--HHHHHHHHHHHHHHHHHHHCC
Confidence 88888875 689999999999999999876
No 60
>TIGR00895 2A0115 benzoate transport.
Probab=99.47 E-value=7.1e-14 Score=140.72 Aligned_cols=284 Identities=12% Similarity=0.009 Sum_probs=156.7
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHH
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 121 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f 121 (445)
++..+..++.....++..+++.|..|+++|++++++......+|..+|+.+++.+ .+. .+++..|
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l--~~~-------------~g~~~~~ 174 (398)
T TIGR00895 110 ILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL--IPV-------------FGWRSLF 174 (398)
T ss_pred HHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH--hhc-------------ccceeeh
Confidence 4455666777778889999999999999999999999999999999999887652 111 2467777
Q ss_pred HHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccc
Q 013336 122 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 201 (445)
Q Consensus 122 ~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
++.+++.++..++....+||++....++++ ++. .+..++...+ ...+++.+ .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~-------------~~~~~~~~------~ 226 (398)
T TIGR00895 175 YVGGIAPLLLLLLLMRFLPESIDFLVSKRP-ETV--------RRIVNAIAPQ-------------MQAEAQSA------L 226 (398)
T ss_pred hhhhhHHHHHHHHHHHhCCCCChHHHhcCH-HHH--------HHHHHHHHHh-------------cccccccc------c
Confidence 776555455555555667887542221110 000 0000000000 00000000 0
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCC--HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHh
Q 013336 202 AEDTNGSFNDGPGAVLVNLLTSLRHLP--PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGV 279 (445)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv 279 (445)
.+ + +......++.++.++..+ +....+++..++...+......|.+.+..+ ++.++. +
T Consensus 227 ~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~---------~--- 286 (398)
T TIGR00895 227 PE---Q---KATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE--LGFSLS---------L--- 286 (398)
T ss_pred cc---c---ccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCHH---------H---
Confidence 00 0 000111222233332211 222333444445555555555555533322 222210 1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecc
Q 013336 280 REGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYS 357 (445)
Q Consensus 280 ~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~s 357 (445)
.+ +.....++...+..++.+++.||+|+|++..... +.+++....... .. +.+ .......+.|+. ....
T Consensus 287 -~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~-~~~---~~~~~~~~~g~~~~~~~~ 357 (398)
T TIGR00895 287 -AA-TGGALFNFGGVIGSIIFGWLADRLGPRVTALLLL-LGAVFAVLVGST--LF-SPT---LLLLLGAIAGFFVNGGQS 357 (398)
T ss_pred -HH-HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH-HHHHHHHHHHHH--hh-CHH---HHHHHHHHHHHHHHHHHH
Confidence 11 2334556677788899999999999995544333 333332222221 11 211 122223335544 4456
Q ss_pred hhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccc
Q 013336 358 VPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPW 399 (445)
Q Consensus 358 vP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l 399 (445)
..++++.+..|++ .+|+.+|+.+....++..++|.+.|.+
T Consensus 358 ~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 358 GLYALMALFYPTA--IRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHhhcCCHH--HHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 6678899999876 579999999999999999999988765
No 61
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.46 E-value=1.9e-12 Score=132.24 Aligned_cols=279 Identities=10% Similarity=-0.009 Sum_probs=154.6
Q ss_pred ccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHH
Q 013336 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (445)
Q Consensus 53 ~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~ 132 (445)
.......+++.|..|+++|.++.++......+|..+|+.+++. +.+. ..+|+.|++.++..+++.
T Consensus 117 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~--l~~~-------------~~w~~~~~~~~~~~~~~~ 181 (406)
T PRK15402 117 FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAA--LIHV-------------LPWRGMFVLFAALAALSF 181 (406)
T ss_pred hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHc-------------cCccHHHHHHHHHHHHHH
Confidence 3445678899999999999999999888888899999988765 2221 257888888776666665
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCC
Q 013336 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (445)
Q Consensus 133 ~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (445)
+...+..||++....++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 199 (406)
T PRK15402 182 FGLWRAMPETAGRVGEKL-------------------------------------------------------------- 199 (406)
T ss_pred HHHHHhCCCCCccccccc--------------------------------------------------------------
Confidence 544445666531100000
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHH
Q 013336 213 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 292 (445)
Q Consensus 213 ~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~ 292 (445)
+....++-++...+.| .++.+++..++...+...+..+.+.|..+ .++.++ .+ .|. ......+.
T Consensus 200 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~~~---------~~----~g~-~~~~~~~~ 263 (406)
T PRK15402 200 SLKELGRDYKLVLKNR-RFVAGALALGLVSLPLLAWIALSPVILIS-GEQLSS---------YE----YGL-LQVPVFGA 263 (406)
T ss_pred cHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HhCCCH---------HH----HHH-HHHHHHHH
Confidence 0001111112223323 34555555444444433443444444333 233221 11 121 11222334
Q ss_pred HHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC
Q 013336 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS 370 (445)
Q Consensus 293 ~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~ 370 (445)
..+.+++.+++.||+++|+...++.+.++++++...+......+.+. .......+.|++ ...+..++. ....++
T Consensus 264 ~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~g~g~~~~~~~~~~~-~~~~~~- 339 (406)
T PRK15402 264 LIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYL--WLTAGLSLYAFGIGLANAGLYRL-TLFSSD- 339 (406)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHH--HHHHHHHHHHHHHHHHhhhHHHH-Hhhhcc-
Confidence 55667888999999999999888888777766555443211101110 111112234444 222222232 223333
Q ss_pred CCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 371 GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 371 ~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
+++|+..++.+....+++.+++.+.+.+.+..+. ......+.+..++..++...+.++
T Consensus 340 -~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK15402 340 -VSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGN--GLFNLFNLANGLLWLLLVRIFLKD 397 (406)
T ss_pred -ccccHHHHHHHHHHHHHHHHHHHHHHhcccCCch--HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3689999999999999999999999998877653 222333333444444444444444
No 62
>PRK10504 putative transporter; Provisional
Probab=99.46 E-value=4.9e-13 Score=139.24 Aligned_cols=303 Identities=12% Similarity=0.042 Sum_probs=166.1
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHH
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 124 (445)
.+..++.....+...+++.|..|+++|+++.++......+|..+|+.+++. ..+. .++|+.|.+.
T Consensus 106 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~--l~~~-------------~gw~~~f~~~ 170 (471)
T PRK10504 106 VLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGL--LVEY-------------ASWHWIFLIN 170 (471)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhh-------------ccHHHHHHHH
Confidence 344444555567788999999999999999999999999999999998876 2221 2589999887
Q ss_pred HHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchh-hhh------
Q 013336 125 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDAN-LKH------ 197 (445)
Q Consensus 125 ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------ 197 (445)
..+..++.+++....||.+.. +.+.+.. ........-.- ......+.. ..++..... ...
T Consensus 171 ~~~~~l~~~~~~~~~~~~~~~---~~r~~~~-------~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 237 (471)
T PRK10504 171 IPVGIIGAIATLMLMPNYTMQ---TRRFDLS-------GFLLLAVGMAT--LTLALDGSK-GLGLSPLAIAGLVAVGVVA 237 (471)
T ss_pred HHHHHHHHHHHHHhCCCcccc---CCCCChH-------HHHHHHHHHHH--HHHHHhcCC-cCCcchHHHHHHHHHHHHH
Confidence 776666666665555554321 1111100 00000000000 000000000 000000000 000
Q ss_pred c-cccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHH
Q 013336 198 I-SKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYD 276 (445)
Q Consensus 198 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~ 276 (445)
. ....+ +++. .++..+++ ++ + .|.++..++..++.+++......+.+.|+.. .++.++ ..
T Consensus 238 ~~~~~~~-~~~~--~~~~~~~~-l~----~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~---------~~ 298 (471)
T PRK10504 238 LLLYLLH-ARNN--NRALFSLK-LF----R-TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQI-GLGFSP---------FH 298 (471)
T ss_pred HHHHHHH-HhcC--CCCccCHH-Hh----c-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCH---------HH
Confidence 0 00000 0000 01111222 22 2 2456667777888887766665666666553 333321 11
Q ss_pred HHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--e
Q 013336 277 QGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--I 354 (445)
Q Consensus 277 ~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~ 354 (445)
.+ +.+..+.+...+...+.+++.||+|+|+++..+.++.+++.+.+.+... +.+. +.......+.|++ .
T Consensus 299 ----~g-~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~g~~~~~ 369 (471)
T PRK10504 299 ----AG-LMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL---LGWY-YLLPFVLFLQGMVNST 369 (471)
T ss_pred ----HH-HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc---cccH-HHHHHHHHHHHHHHHH
Confidence 11 2333455556666788999999999999999888877776554443321 1110 0011112223333 2
Q ss_pred ecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccC
Q 013336 355 TYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 405 (445)
Q Consensus 355 ~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~ 405 (445)
....-.+++.+..|++ .+|..+|+.|+...+++.+++.+.|.+.+..|.
T Consensus 370 ~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 370 RFSSMNTLTLKDLPDN--LASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHcCCHH--hccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3333456677777765 678889999999999999999999988776653
No 63
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.46 E-value=5.5e-13 Score=153.58 Aligned_cols=282 Identities=14% Similarity=0.032 Sum_probs=169.9
Q ss_pred HHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHH
Q 013336 44 FWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLV 123 (445)
Q Consensus 44 ~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i 123 (445)
.++..++.....+...+++.|..|+++|++++++.+...++|.++|+.+|+++ ... ..+++.|.+
T Consensus 115 ~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l--~~~-------------~~~~~~~~~ 179 (1140)
T PRK06814 115 LFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA--TIS-------------GNFVILVAL 179 (1140)
T ss_pred HHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH--Hhc-------------cccHHHHHH
Confidence 33445555556678999999999999999999999999999999999999972 221 246777744
Q ss_pred HHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccc
Q 013336 124 AVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAE 203 (445)
Q Consensus 124 ~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (445)
.++..+++ ++..+.+||.+....+.+. +
T Consensus 180 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~-------------------------------------------------- 207 (1140)
T PRK06814 180 LMGIAVLG-WLASLFIPKTGNAAPDLKI-D-------------------------------------------------- 207 (1140)
T ss_pred HHHHHHHH-HHHHhhCCCCCCCCCCCee-c--------------------------------------------------
Confidence 44443333 3344556665421110000 0
Q ss_pred ccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHH
Q 013336 204 DTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGA 283 (445)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~ 283 (445)
.......++.++.+++ .+.++.+.+..++.|+....+..+.+.|+.+ .++.++. . .|
T Consensus 208 -------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~~~~---------~----~g- 264 (1140)
T PRK06814 208 -------RNIIRSTITLLKYAKA-DKRIWLAILGISWFWLVGAVVLSQLPLLAKE-TLGGDEN---------V----AT- 264 (1140)
T ss_pred -------cchHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HcCCchH---------H----HH-
Confidence 0000112223334444 2456667777777777777777778877765 4554421 1 22
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhh---------------c-cccccCCcceeeec
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISV---------------I-SVREYSGGIEHGIG 347 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~---------------~-~~~~~~~~~~~~~~ 347 (445)
+.+..+++..++.+++.+++.|+.+++++...+.++.+++.+.+.+... . ..+.+ ...+..
T Consensus 265 ~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 341 (1140)
T PRK06814 265 LFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW---RILIDL 341 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH---HHHHHH
Confidence 3344566777788999999998888777766666666555443333200 0 00111 111112
Q ss_pred cccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHH
Q 013336 348 ANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAG 421 (445)
Q Consensus 348 ~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~ 421 (445)
.++|++ ..+..-++++.+..|++ .+|+.+|+.|++..+++.+++++.|.+.+...+. ...+++.+++.++.
T Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~p~~--~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~-~~~~~~~~~~~~~~ 414 (1140)
T PRK06814 342 FGLAAAGGLYIVPLFAALQAWANPA--HRARVIAANNVLNAAFMVAGTIILALLQALGFSI-PWIILFIALANLIV 414 (1140)
T ss_pred HHHHHHHHHhHHHHHHHHHhhCCcc--cceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCH-HHHHHHHHHHHHHH
Confidence 234444 33333467888888876 6899999999999999999999988876433221 23344444433333
No 64
>PRK10054 putative transporter; Provisional
Probab=99.45 E-value=2.3e-13 Score=138.86 Aligned_cols=265 Identities=11% Similarity=0.023 Sum_probs=153.9
Q ss_pred chhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhh
Q 013336 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (445)
Q Consensus 55 ~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~ 134 (445)
.+...+++.|.+|+++|++++++.....++|..+|+.+++.+ .+ ..++.+|.+.+++.+++.++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l--~~--------------~g~~~~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 114 STVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL--VM--------------QSINLPFWLAAICSAFPLVF 177 (395)
T ss_pred HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH--------------hccCcHHHHHHHHHHHHHHH
Confidence 344788899999999999999999999999999999998862 21 14678888877776666554
Q ss_pred eeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCcc
Q 013336 135 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPG 214 (445)
Q Consensus 135 t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (445)
..+.+||.+.. ++++ + + ..
T Consensus 178 ~~~~~~~~~~~--~~~~-~-----------------------------------------------------~-----~~ 196 (395)
T PRK10054 178 IQIWVQRSEKA--IATE-T-----------------------------------------------------G-----SV 196 (395)
T ss_pred HHHHHhccccc--cccc-h-----------------------------------------------------h-----hh
Confidence 44445654311 1000 0 0 00
Q ss_pred chHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHH
Q 013336 215 AVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLG 294 (445)
Q Consensus 215 ~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~ 294 (445)
.+.++ ..+. |.++.+.+..++.++....+..+.+.|+.. ..+.+ ..+. ..| +.+..+++...
T Consensus 197 ~~~~~----~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~----------~~~~-~~g-~~~~~~~~~~~ 258 (395)
T PRK10054 197 WSPSV----LLQD-KALLWFTCSGFLASFVSGAFASCISQYVMV-VADSD----------FAEK-VVA-VVLPVNAAMVV 258 (395)
T ss_pred hhhhh----hccC-ceehHHHHHHHHHHHHHHHhhhhHHHHHHH-hcccc----------hHHH-HHH-HHHHhhhhhee
Confidence 00121 1221 344445555555555444443444444322 11110 0111 112 22333444444
Q ss_pred HHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCC
Q 013336 295 VSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGG 372 (445)
Q Consensus 295 i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~ 372 (445)
......+++.||.++|+....+.+..+++++...+.. ++.+ ...+...+.|++ ...+.-++++.+..|++
T Consensus 259 ~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~-- 330 (395)
T PRK10054 259 SLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG----NSLL--LWGMSAAVFTVGEIIYAPGEYMLIDHIAPPG-- 330 (395)
T ss_pred eehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc----hHHH--HHHHHHHHHHHHHHHHHhhHHHHHHHhCCcc--
Confidence 4456778999999999998888877777665443321 2110 011122234444 22223356777888875
Q ss_pred CcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 373 GQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 373 ~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
.+|+++|..| ..++++.++|..+|.+.|..|.. ..|.+.+++..++.++.
T Consensus 331 ~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~--~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 331 MKASYFSAQS-LGWLGAAINPLVSGVILTTLPPW--SLFVILALAIVAAWLLM 380 (395)
T ss_pred cceehHhHHH-HHHHHHHHHHHHHHHHHHHcChh--hHHHHHHHHHHHHHHHH
Confidence 5688888766 67799999999999999988743 45655555544444444
No 65
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.45 E-value=1.2e-12 Score=132.91 Aligned_cols=176 Identities=12% Similarity=-0.002 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHH-HHHhhhhhhhhhhcC
Q 013336 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVL-GVSSFLIEPMCRWIG 308 (445)
Q Consensus 230 ~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~-~i~s~i~~~l~~r~g 308 (445)
.++.++...++...+......|.+.|+.| . +-++ + ..| +.....++.. .+..++.+++.||+|
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~-G~s~----------~---~ig-~~~~~~~~~~~~~g~~~~g~l~~r~g 272 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-A-GWPL----------E---WIG-RLGMAGGAVTVLLGCGGGAWLVRRAG 272 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-c-CCCH----------H---HHH-HHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 35666666666666666666677766655 2 2221 1 122 1112233333 344678999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHH
Q 013336 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIV 386 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~ 386 (445)
+|+....+.+..++..+......... .............+.++. .....-++.+.++.+++ +.+|+++++.|+...
T Consensus 273 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 350 (390)
T TIGR02718 273 LWRTFILGVGLAGSLALLWFAQAAFW-LAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDG-DQAGTDVTAVQSTRD 350 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc-cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-cchHHHHHHHHHHHH
Confidence 99998887666543322211111100 000000000011111211 22233345556666542 367999999999999
Q ss_pred HHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 387 IPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 387 l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
++.++++.++|.+.+..|.. ..|.+++++++++.++.
T Consensus 351 lg~~~g~~~~G~l~~~~G~~--~~f~~~~~~~l~a~~~~ 387 (390)
T TIGR02718 351 LGELIASSIAGYLTDRFGYA--GGFLSGTVLAVLAILLA 387 (390)
T ss_pred HHHHHHHHHHHHHHHHHccH--HHHHHHHHHHHHHHHHh
Confidence 99999999999999988753 57888888888776654
No 66
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.44 E-value=1.5e-13 Score=141.14 Aligned_cols=138 Identities=11% Similarity=0.019 Sum_probs=92.4
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAE 365 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~ 365 (445)
++.+...+..++.+++.||+|+|+...++.++.++++++.++.. +.+ .......+.|+. ......++.+.+
T Consensus 270 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~----~~~---~~~~~~~l~g~~~~~~~~~~~~~~~~ 342 (420)
T PRK09528 270 FQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT----GPL---EVSILKLLHAFEVPFLLVGVFKYITL 342 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc----cHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555667788899999999999999988888887766554432 322 111112223333 222333466677
Q ss_pred hhccCCCCcccchhH-HHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCC
Q 013336 366 LTADSGGGQGLAIGV-LNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNS 436 (445)
Q Consensus 366 ~~~~~~~~~G~~~gi-~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~ 436 (445)
..|++ .+++..++ .|....++.++++.+.|.+.|..|. ...|.+.+++.+++.++..+.+++.+.++
T Consensus 343 ~~~~~--~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~--~~~f~~~~~~~~i~~~~~~~~~~~~~~~~ 410 (420)
T PRK09528 343 NFDVR--LSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF--QGTYLILGGIVLLFTLISVFTLSGDRELS 410 (420)
T ss_pred HcCcc--ceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCc--hHHHHHHHHHHHHHHHHHHHHhcCCchhh
Confidence 77764 45666655 7888899999999999999998874 35677777777776666666666555444
No 67
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.44 E-value=3.2e-12 Score=129.37 Aligned_cols=266 Identities=11% Similarity=0.060 Sum_probs=160.1
Q ss_pred hhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhhe
Q 013336 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (445)
Q Consensus 56 ~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t 135 (445)
.+..+.++|..|+++|+++.++......+|.++++.++.. +.+. ..||+.|++.+++.++..++.
T Consensus 97 ~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~--l~~~-------------~gWr~~f~~~~~l~~~~~~~~ 161 (368)
T TIGR00903 97 LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLK--IYTA-------------GGLQLLIIPIAAVAAAGIILV 161 (368)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHc-------------cchHHHHHHHHHHHHHHHHHH
Confidence 4566778999999999999999999999999999998876 2221 268999988666655555556
Q ss_pred eeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccc
Q 013336 136 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGA 215 (445)
Q Consensus 136 ~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (445)
.+.+||+|.+..++.+ . + +...
T Consensus 162 ~~~lp~~p~~~~~~~~-------------------------------------------------~-----~----~~~~ 183 (368)
T TIGR00903 162 LAALPALPFQAAEGFG-------------------------------------------------F-----K----DAVK 183 (368)
T ss_pred HHHcCCCCCCCCCCcc-------------------------------------------------h-----H----HHHH
Confidence 6678997642210000 0 0 0011
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHH
Q 013336 216 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGV 295 (445)
Q Consensus 216 ~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i 295 (445)
.++++++ .+.++.+++..++...+++.+..+.++|+.+. +-+. +.+. ... +..+.+.+
T Consensus 184 ~~~~ll~-----~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~--g~s~----------~~~~----~~~-l~~~~g~~ 241 (368)
T TIGR00903 184 EFGALAG-----RKDLWIIGAILGFGVALFDNLAIWLEAALRPA--GLED----------IAGD----AVA-LAILAGLI 241 (368)
T ss_pred HHHHHHc-----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCh----------HHHH----HHH-HHHHHHHH
Confidence 2343333 25677888888888888888888899888541 2110 1111 111 11122222
Q ss_pred HhhhhhhhhhhcC---chhhHHH-HHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhcc
Q 013336 296 SSFLIEPMCRWIG---SRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTAD 369 (445)
Q Consensus 296 ~s~i~~~l~~r~g---~r~l~~~-g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~ 369 (445)
. .+++.||.+ +|+.+.. ..++.++++....+.. +.+ .......+.++. ....+-+++.+|..|+
T Consensus 242 g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~----~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~ 311 (368)
T TIGR00903 242 G---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFEL----NRL---ALFAFIGIAGLLMLPAYAIIMDWIGKFCDK 311 (368)
T ss_pred H---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcc----ccH---HHHHHHHHHHHhhhhhHHHHHHHHHHhcch
Confidence 2 245666654 3444443 3333343332222111 111 112222223322 2223335788999998
Q ss_pred CCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 370 SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 370 ~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
+ .+|+.+|+.|....++.+++|...+.+.. |. ...|.+.++..+++++.+. +.|++|
T Consensus 312 ~--~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~--~~~f~~~~~~~~i~~~~~~-~~~~~~ 368 (368)
T TIGR00903 312 E--LHGKAAGAIGFTSRAISVALALAAMLFIS--SA--EAYFTFLAILITIAFAIAL-LLPNDR 368 (368)
T ss_pred h--hcCcccchhhHHHHHHHHHHHHHHHHHhc--CH--HHHHHHHHHHHHHHHHHHH-hCCCCC
Confidence 6 57888999999999999999988887663 32 3467777888888887664 446553
No 68
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.43 E-value=1.5e-12 Score=135.43 Aligned_cols=291 Identities=12% Similarity=0.041 Sum_probs=164.1
Q ss_pred hccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHH
Q 013336 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (445)
Q Consensus 48 d~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~ 127 (445)
.++......|..+++.|..| ++|+++.++......+|..+++.+++. +.+. .++|+.|++.+++
T Consensus 119 G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~--l~~~-------------~gwr~~f~~~~~~ 182 (455)
T TIGR00892 119 GLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQY--LFES-------------FGWRGSFLILGGL 182 (455)
T ss_pred HhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHH--HHHH-------------hChHHHHHHHHHH
Confidence 34444445677788889885 789999999999999999999887765 2221 2589999988776
Q ss_pred HHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCC
Q 013336 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (445)
Q Consensus 128 ~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (445)
.+++.+..++..|+++....++.+ +++. ... ++..++... +
T Consensus 183 ~~~~~v~~~~~~~~~~~~~~~~~~-~~~~-~~~--------------------------~~~~~~~~~-----------~ 223 (455)
T TIGR00892 183 LLHCCVCGALMRPVGPSQRVSKSK-SKEG-LPP--------------------------DGSTKKLSK-----------K 223 (455)
T ss_pred HHHHHHHHHHhCCCCccccccccc-cccc-CCC--------------------------CCccccccc-----------c
Confidence 665554444443432211000000 0000 000 000000000 0
Q ss_pred CCCCCccchHHHH--HHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHH
Q 013336 208 SFNDGPGAVLVNL--LTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (445)
Q Consensus 208 ~~~~~~~~~~~~~--~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~ 285 (445)
......++. ++.+ +. +.++.+++..++.+++++....|.+.|..+ ++.++ .+.| +.
T Consensus 224 ----~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--~g~s~---------~~~g-----~~ 281 (455)
T TIGR00892 224 ----STAEKINRFLDFSLF-TH-RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD--KGVDE---------YEAA-----FL 281 (455)
T ss_pred ----chhhhhhhhcchHHh-cC-chHHHHHHHHHHHHHHccchHHHHHHHHHH--cCCCH---------HHHH-----HH
Confidence 000001111 1222 22 446666666677777776666677766643 22221 1111 23
Q ss_pred HHHHHHHHHHHhhhhhhhhhh--cCchhhHHH--HHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchh
Q 013336 286 LLLNSVVLGVSSFLIEPMCRW--IGSRLVWAI--SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVP 359 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r--~g~r~l~~~--g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP 359 (445)
+.+.++...+...+.+++.|| +++|+...+ +.+..+++++...+.. +.+ ...+...+.|++ ......
T Consensus 282 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~----~~~---~~~i~~~~~G~~~g~~~~~~ 354 (455)
T TIGR00892 282 LSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG----DYT---GLVIYCIFFGLSFGSVGALL 354 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc----hHH---HHHHHHHHHHHHhchHHHHH
Confidence 334566667777888899987 334433333 3333333333222221 211 122223345554 344556
Q ss_pred HHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 360 FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 360 ~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
++++.+..|++ .+|+.+|+.++...++++++|.++|.+.+..|+. ...|++.+++.++++++.
T Consensus 355 ~~~~~~~~~~~--~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~-~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 355 FEVLMDLVGAQ--RFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNY-KYIFYASGSIVVSAGLFL 417 (455)
T ss_pred HHHHHHHhhHH--HHhhHHhHHHHHHHHHHHccccceeeeehhcCCc-chHHHHhhHHHHHHHHHH
Confidence 78889988875 6799999999999999999999999999887643 357777777777666543
No 69
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.42 E-value=8e-13 Score=138.92 Aligned_cols=297 Identities=13% Similarity=0.016 Sum_probs=164.3
Q ss_pred HhccccccchhhHHHHhcC-CCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADL-SGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~-~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
..++.....+...+.+.|. .|+++|++++++.....++|..+|+.+|+. +.+. ..||+.|++..
T Consensus 104 ~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~--l~~~-------------~gwr~~f~i~~ 168 (495)
T PRK14995 104 LAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGI--LLEH-------------FYWGSVFLINV 168 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhcc-------------CChHHHHHHHH
Confidence 3444444445566667665 478999999999999999999999999986 2221 26899999987
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhh--------
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKH-------- 197 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 197 (445)
.+.+++.++....+||+|..+. ++. |........ ...- ...+... ...++.........
T Consensus 169 ~~~~~~~~l~~~~l~~~~~~~~--~~~-------d~~g~~~~~-~~~~-~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 235 (495)
T PRK14995 169 PIVLVVMGLTARYVPRQAGRRD--QPL-------NLGHALMLI-VAIL-LLVYSAK--TALKGFLSLWVTSLTLLTGALL 235 (495)
T ss_pred HHHHHHHHHHHHhCCCCCCCCC--CCC-------ChHhHHHHH-HHHH-HHHHHHH--hccccCCchHHHHHHHHHHHHH
Confidence 7777777777777887642111 111 110000000 0000 0000000 00000000000000
Q ss_pred ccccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHH
Q 013336 198 ISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQ 277 (445)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~ 277 (445)
..-....+.+ .+.+... .+++ + .+.+...++..++..++++++.+|.+.|+.+ +++.+|. +.
T Consensus 236 l~~f~~~e~~--~~~p~~~-~~lf----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~-v~g~s~~---------~a 297 (495)
T PRK14995 236 LGLFIRTQLA--ASRPMID-MRLF----T-HRIILSGVVMAMTAMITLVGFELLMAQELQF-VHGLSPL---------EA 297 (495)
T ss_pred HHHHHHHHhc--CCCCCcC-HHHh----C-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHH---------HH
Confidence 0000000000 0001111 1112 1 1344555667777777777788888887765 4554421 22
Q ss_pred HhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--ee
Q 013336 278 GVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--IT 355 (445)
Q Consensus 278 gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~ 355 (445)
| ..+..+++...+.+.+.+++.||+|+|++...+.++.+++++++.+.... +.. +.......+.|++ ..
T Consensus 298 g-----~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~--~~~--~~~~~~~~l~G~g~g~~ 368 (495)
T PRK14995 298 G-----MFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFS--TQQ--WQAWGLMALLGFSAASA 368 (495)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCC--Cch--HHHHHHHHHHHHhHHHH
Confidence 2 33345667777889999999999999998888888887776554443211 111 0112223345555 33
Q ss_pred cchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccc
Q 013336 356 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 400 (445)
Q Consensus 356 ~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~ 400 (445)
.....+.+.+..|++ ++|...++.|++..+++.+++.+.|.+.
T Consensus 369 ~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 369 LLASTSAIMAAAPPE--KAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHHHHhcCCHH--hcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333345556666765 5788899999999999999988887664
No 70
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.41 E-value=2.7e-12 Score=130.22 Aligned_cols=269 Identities=13% Similarity=0.019 Sum_probs=169.0
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
.....+...+...++..|. +++|+++.+......++|.++|+.+++. +.+.+ ++|..|++.++
T Consensus 104 ~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~--l~~~~-------------g~~~~f~~~~~ 166 (382)
T TIGR00902 104 FALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGG--LIGMF-------------DEQNILAILTA 166 (382)
T ss_pred HHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHH--HHHHc-------------ChhHHHHHHHH
Confidence 3444445566677776653 5788999999999999999999998876 32222 46777877655
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
..++.++ . +..+|++.++ ++++ ++
T Consensus 167 ~~~~~~~-~-~~~~~~~~~~-~~~~-~~---------------------------------------------------- 190 (382)
T TIGR00902 167 GLAFMLI-G-FLIKPTIPPK-DAIP-ED---------------------------------------------------- 190 (382)
T ss_pred HHHHHHH-H-HHcCCCCCCC-cccc-cc----------------------------------------------------
Confidence 4333332 2 2334432111 1000 00
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH
Q 013336 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l 286 (445)
+ ......++++++ .|.++.+.+..++.+.+...+..|.+.|+.+ ++.++. . .| +..
T Consensus 191 ~---~~~~~~~~~~l~-----~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~--~g~s~~---------~----~g-~l~ 246 (382)
T TIGR00902 191 E---SQGDSAFIALLK-----NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA--AGISAS---------A----TG-LLW 246 (382)
T ss_pred c---cccchhHHHHHc-----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCHh---------H----HH-HHH
Confidence 0 001112333322 2556777778888888888888888888864 333211 1 22 223
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
.+..+...+...+.+++.||+|+|+++.++.+.+++..+.+++.. +.+ .......+-|+. ........++.
T Consensus 247 ~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~----~~~---~~~~~q~l~g~~~~~~~~~~~~~i~ 319 (382)
T TIGR00902 247 GIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE----AFP---LIFLLQILHCGTFAVCHLAAMRYIA 319 (382)
T ss_pred HHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh----hHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666678889999999999999999999988877665543 322 122223334433 33344455666
Q ss_pred hhhccCCCCcccchhHHH-HHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 365 ELTADSGGGQGLAIGVLN-LAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n-~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
+. |++ ++++..|++| ....++.+++++++|.+.+..|. ..|...+++++++.+++
T Consensus 320 ~~-~~~--~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~---~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 320 AQ-PGS--EIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA---GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred hC-CHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHH
Confidence 65 654 5688899987 46789999999999999998863 46778888888775544
No 71
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.41 E-value=4.6e-13 Score=139.47 Aligned_cols=298 Identities=13% Similarity=0.028 Sum_probs=166.9
Q ss_pred HHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHH
Q 013336 43 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 122 (445)
Q Consensus 43 g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 122 (445)
+..+..++.....++..+++.|..|+++|+++.++......+|..+|+.+++.+ .+. .++|+.|+
T Consensus 96 ~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l--~~~-------------~~w~~~f~ 160 (485)
T TIGR00711 96 FRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWI--IEN-------------YHWRWIFL 160 (485)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHh--ccC-------------cCceehhh
Confidence 334445566667788999999999999999999999999999999999988762 211 25788888
Q ss_pred HHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccc----cccccCCCCCCCCCCCCCCccCCcccchhhhhc
Q 013336 123 VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRN----AISKSKHDMPAAPNANGNKVESGHESDANLKHI 198 (445)
Q Consensus 123 i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (445)
+.+.+.+++.++..+..||++... +++.| ..... ....... . ...+ .+.++..+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d-------~~g~~l~~~~~~~~~~--~---~~~~--~~~~~~~~~~~~~~ 224 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAA--SENFD-------FLGLLLLSVGLGSLLY--G---LSEG--PERGWFDSNEILIL 224 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccc--cCCCc-------HHHHHHHHHHHHHHHH--H---HhhC--CCCCCCCchHHHHH
Confidence 877666666665666677743211 11111 00000 0000000 0 0000 00111111000000
Q ss_pred ----------cccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCC
Q 013336 199 ----------SKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGN 268 (445)
Q Consensus 199 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~ 268 (445)
....+.. + +.+.... +++ ++ +.++..++..++..++.+....|.+.|+.+ +++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~-~---~~~~~~~-~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~s~~-- 291 (485)
T TIGR00711 225 SITGLVAIIAFVVWELT-D---DNPLVDL-RLF---KY--RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQ-VLGYTAL-- 291 (485)
T ss_pred HHHHHHHHHHHHHHHHc-C---CCCccCH-HHH---cC--CChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH--
Confidence 0000000 0 0011111 111 21 345555667777777777777778877765 4443321
Q ss_pred ChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeecc
Q 013336 269 DHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGA 348 (445)
Q Consensus 269 s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (445)
+ .| +.+...++...+.+.+.+++.||+|||++..++.++.++++..+.+.. .....+. .......
T Consensus 292 -------~----~g-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~ 356 (485)
T TIGR00711 292 -------Q----AG-LHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTF-TPDTPFL--AIALPQF 356 (485)
T ss_pred -------H----HH-HHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccC-CCCCCHH--HHHHHHH
Confidence 1 12 233455667778889999999999999999888888877665544211 0101110 1111223
Q ss_pred ccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccc
Q 013336 349 NQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA 401 (445)
Q Consensus 349 ~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~ 401 (445)
+.|++ .....-.....+..|++ .+|...|+.|+...+++.+++.+.|.+.+
T Consensus 357 l~g~g~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 357 IRGFGMGCFFMPLTTIALSGLPPH--KIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHH--HHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34544 22221223344556654 67999999999999999999998887764
No 72
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.40 E-value=1.2e-12 Score=137.09 Aligned_cols=136 Identities=12% Similarity=0.070 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-ccc---cccceecchhH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GAN---QAIKITYSVPF 360 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~Gi~~~~svP~ 360 (445)
.+..+++...+.+++.+++.||+|+|+++..+.++.++..+...... +... ..... ... .+.+. ..+-.
T Consensus 316 ~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~-~~~~~ 388 (496)
T PRK03893 316 VLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG----GANV--WVLGLLLFFQQMLGQGI-SGLLP 388 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc----ccHH--HHHHHHHHHHHHHhccc-chhhH
Confidence 33456677778889999999999999998887666555433222211 1110 01111 111 11112 22223
Q ss_pred HHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHH-HHHHHHHHHHHHhhheeccC
Q 013336 361 AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAF-VLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 361 aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f-~~~~v~~ll~~~~~~~~vpe 431 (445)
+++.++.|++ .+|+.+|+.+....++..++|.+.|.+.+..|.. ..+ ..+++..+++.+...+..|+
T Consensus 389 ~~~~~~~~~~--~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~ 456 (496)
T PRK03893 389 KLIGGYFDTE--QRAAGLGFTYNVGALGGALAPILGALIAQRLDLG--TALASLSFSLTFVVILLIGLDMPS 456 (496)
T ss_pred HHHHhhCCHH--HhhcccchhhhhhhHHHHHHHHHHHHHhccCChH--HHHHHHHHHHHHHHHHHHHhcCcH
Confidence 6778888875 5799999999999999999999999999888753 234 33444444454545455554
No 73
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.40 E-value=1.9e-12 Score=134.70 Aligned_cols=299 Identities=11% Similarity=0.060 Sum_probs=165.6
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
..++.....+...+++.|..|+++|++++++......+|.++|+.+++.+ .+.. .++|..|++.++
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l--~~~~------------~gw~~~f~i~~~ 206 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWL--CESW------------GGWPMIFYVFGI 206 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhcc------------CCCCeehhhhhH
Confidence 44455556677889999999999999999999999999999999888752 2110 157888988777
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
+.++..++.....||+|....+.++ ++.+. .++ ..++++
T Consensus 207 ~~~~~~~~~~~~~~~~p~~~~~~~~----------~~~~~----------------------------i~~---~~~~~~ 245 (465)
T TIGR00894 207 VGCAWSLLWFVFPADDPSIHPCISK----------FEKKY----------------------------INS---SLQGQK 245 (465)
T ss_pred HHHHHHHHHHHHhcCCcccCCCCCH----------HHHHH----------------------------HHh---hccccc
Confidence 6655555444556666532111000 00000 000 000000
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH
Q 013336 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l 286 (445)
+ +...+..++++++ .+.++.+++..+....+++.+..|.+.|+.+ .++.++. + .| +..
T Consensus 246 ~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-~~g~s~~---------~----~g-~~~ 303 (465)
T TIGR00894 246 G--STRQSLPIKAIPK-----SLPVWAIWFAIFGHFWLYTILPTYLPTFISW-VLRVSGK---------E----NG-LLS 303 (465)
T ss_pred C--CCCCCCCHHHHhc-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcChH---------H----hH-HHH
Confidence 0 0011223554443 2567778888888888888888899988876 4444321 1 12 222
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHH---HHHHHHHHHH---HHHHHhhhccccccCCcceeeeccccccc--eecch
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWA---ISNFIVFACM---ATTAIISVISVREYSGGIEHGIGANQAIK--ITYSV 358 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~---~g~~~~ai~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~sv 358 (445)
.+..+...+.+++.+++.||+++|+... ...+..++++ ....+......+.. +..++...+.+.. .....
T Consensus 304 ~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~ 381 (465)
T TIGR00894 304 SLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAF--YLTIIILTLANAVSSGPLAG 381 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCch--HHHHHHHHHHHHHhhhhhhh
Confidence 3445667778888999999876542210 0001111111 11111111000111 0111111111211 11111
Q ss_pred hHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCc-chhHHHHHHHHHHHHHHhhhe
Q 013336 359 PFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG-NIPAFVLASLSALAGGVVATL 427 (445)
Q Consensus 359 P~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~-~~~~f~~~~v~~ll~~~~~~~ 427 (445)
-++...++.|+ ..|..+|+.|+...++.+++|.+.|.+.+..+.+ ...+|.+.++..++++++..+
T Consensus 382 ~~~~~~~~~~~---~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 382 VLINSLDLAPR---FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred hhhchhhcChh---HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 12223344443 5799999999999999999999999887643111 134677788778887776543
No 74
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.40 E-value=8.4e-13 Score=135.83 Aligned_cols=192 Identities=8% Similarity=-0.050 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCch
Q 013336 231 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 310 (445)
Q Consensus 231 l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r 310 (445)
+..+.+..++...+......|.+.|+.+ ++.++.. -..+ +.......+.+..+...+..++.+++.||+|+|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~----~~~~--~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r 281 (418)
T TIGR00889 210 MAIFFFFSMLLGAPLQITNIFGNGFLHE--FGRNPEF----ADSF--VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK 281 (418)
T ss_pred eeeHHHHHHHHHhHHHHHHHhHHHHHHH--hcccccc----cchh--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 3445555555555544455555655543 2222210 0000 111222344455666777788899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHH-HHHHH
Q 013336 311 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLN-LAIVI 387 (445)
Q Consensus 311 ~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n-~~~~l 387 (445)
+++.++.+..++++........ +.+..+...+...+.|+. ........++.+..|++ .+|+.+|+.+ ....+
T Consensus 282 ~~l~~~~~~~~v~~~l~~~~~~---~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~--~~g~~~g~~~~~~~~l 356 (418)
T TIGR00889 282 KVMLLSLVAWALRFGFFAYGDP---EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVH--IRASAQGLFTLMCNGF 356 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHcCc---chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHhh
Confidence 9999998888876554433210 110000011122334443 33344457788888875 6799999998 56789
Q ss_pred HHHHhhhccccccccccC----cchhHHHHHHHHHHHHHHhhheeccCCCCC
Q 013336 388 PQMIVSLGAGPWDALFGG----GNIPAFVLASLSALAGGVVATLKLPHLSSN 435 (445)
Q Consensus 388 ~qii~~~~~g~l~~~~g~----~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~ 435 (445)
+.+++|.++|.+.+..|. +...+|.+.++++++++++..+++||+++.
T Consensus 357 g~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 357 GSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 999999999999988663 123568888888888888888888887653
No 75
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.38 E-value=6e-12 Score=127.66 Aligned_cols=271 Identities=13% Similarity=0.054 Sum_probs=160.3
Q ss_pred hccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHH
Q 013336 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (445)
Q Consensus 48 d~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~ 127 (445)
.++.+..++...+++.|. +++|+++++....+..+|..+|+.+|++ +.+.+ .+|..|++.++.
T Consensus 105 g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~--l~~~~-------------g~~~~f~~~~~~ 167 (382)
T PRK11128 105 NLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGK--LVSWF-------------GEQAILWILTAG 167 (382)
T ss_pred HHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHH--HHHHc-------------ChhHHHHHHHHH
Confidence 334455666677888876 5678889999999999999999999987 32222 477888776665
Q ss_pred HHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCC
Q 013336 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (445)
Q Consensus 128 ~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (445)
.++..++. +..||++. .++++ + . +
T Consensus 168 ~~~~~~~~-~~~~~~~~--~~~~~-~-----------------------------------------------~-----~ 191 (382)
T PRK11128 168 VASMLLGQ-LLRPTIMP--QGESR-Q-----------------------------------------------Q-----E 191 (382)
T ss_pred HHHHHHHH-HccCCCCC--ccccc-c-----------------------------------------------c-----c
Confidence 55444332 33454321 10000 0 0 0
Q ss_pred CCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHH
Q 013336 208 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (445)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~ 287 (445)
++...++++++++ |.++.+++..++.+.+...+..|.+.|+.| .+.++. + .| ..+.
T Consensus 192 ---~~~~~~~~~i~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~g~s~~---------~----~g-~~~~ 247 (382)
T PRK11128 192 ---SAGWPAWKALLKE-----PTVWRFLLCVSLLQGSHAAYYGFSAIYWQA--AGYSAS---------T----IG-YLWS 247 (382)
T ss_pred ---ccccchHHHHHcC-----hhHHHHHHHHHHHHHHhHhHHHHHHHHHHH--CCCCHh---------H----HH-HHHH
Confidence 0011234444432 456666666676666666666677766643 232210 1 22 1222
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAE 365 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~ 365 (445)
+..+...+..++.+++.||+++|+...++.+..+++++...+.. +.+ ...+...+.|+. .....=...+.+
T Consensus 248 ~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~g~~~~~~~~~~~~~~~~ 320 (382)
T PRK11128 248 LGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT----ALP---WLIVIQILHCGTFTVCHLAAMRYIAA 320 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh----hHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666678889999999999999888888887766554432 322 122223334444 222111222333
Q ss_pred hhccCCCCcccchhHHH-HHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhee
Q 013336 366 LTADSGGGQGLAIGVLN-LAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 366 ~~~~~~~~~G~~~gi~n-~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~ 428 (445)
. +++ ++|+..++.+ ....+++.+++.++|.+.|..|. ..++..+++++++.+...+.
T Consensus 321 ~-~~~--~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~---~~~~~~~~~~~~~~~~~~~~ 378 (382)
T PRK11128 321 R-PGS--EVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA---GVFWVMALVALPALFIRPKV 378 (382)
T ss_pred C-CHh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHh
Confidence 2 332 4688888887 66678889999999999998873 35677777777665554433
No 76
>PRK03699 putative transporter; Provisional
Probab=99.36 E-value=3.9e-12 Score=129.60 Aligned_cols=270 Identities=11% Similarity=0.031 Sum_probs=156.3
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
..++.....+...+++.|..|+++|+++.+......++|..+++.+.+.+ ..+ ..++|+.|.+.++
T Consensus 105 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l-~~~-------------~~gw~~~f~~~~~ 170 (394)
T PRK03699 105 LGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL-LAR-------------SIEWYWVYACIGL 170 (394)
T ss_pred HHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-------------cccHHHHHHHHHH
Confidence 34444445566788999999999999999988888888888888766541 111 1268999988766
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
+.++..++.+ .++.|..+.++++ + +
T Consensus 171 ~~~~~~~~~~--~~~~p~~~~~~~~---~-------------------------------------------------~- 195 (394)
T PRK03699 171 VYVAIFILTL--FSEFPALGKHAPK---A-------------------------------------------------D- 195 (394)
T ss_pred HHHHHHHHHH--hcCCccccccCcc---c-------------------------------------------------c-
Confidence 5555443332 2222211100000 0 0
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH
Q 013336 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l 286 (445)
+. ..+.. + .+.++.+++..++..++.+.+..|.+.|+.| .++-++. +.| +..
T Consensus 196 ~~---~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~---------~~~-----~~~ 247 (394)
T PRK03699 196 KP---VAKEK--------W--GIGVLFLAIAALLYILAQLTFISWVPEYAQK-KFGMSLE---------DAG-----NLV 247 (394)
T ss_pred Cc---ccccc--------C--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChH---------Hhh-----HHH
Confidence 00 00000 0 1334445555555555666677788888765 4454421 111 222
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+...+..++.+++.||+++|+......++.++.+....+.. +.+ ...+...+.|+. ...+...+...
T Consensus 248 ~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~G~~~~~~~~~~~~~~~ 320 (394)
T PRK03699 248 SNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD----DPS---HLLYAILGLGFFSSAIYTTIITLGS 320 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC----Cch---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555667788899999999999988876666555433332221 221 111122234433 22233344455
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
+..|+ ..+...|..+.+..++++++|.+.|.+.+..|.. ..+++.+++.+++.+++
T Consensus 321 ~~~~~---~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~--~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 321 QQTKV---ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQ--AALLTANGLYAVVFVMC 376 (394)
T ss_pred HHccC---CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCch--hhhhhhHHHHHHHHHHH
Confidence 55543 2456678889999999999999999999888754 45666666666554433
No 77
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.34 E-value=6.8e-12 Score=127.13 Aligned_cols=126 Identities=12% Similarity=0.011 Sum_probs=86.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+..++..+..+++.||+|+|++...+.+..+++.+... . +.. ......+.|+. ...+...+++.
T Consensus 242 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~----~~~----~~~~~~l~g~~~~~~~p~~~~~~~ 311 (381)
T PRK03633 242 ALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S----QAA----MAPALFILGAAGFTLYPVAMAWAC 311 (381)
T ss_pred HHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h----hHH----HHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345566777888899999999999998888777776554322 1 100 11111223333 33344456677
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhh
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 426 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~ 426 (445)
+..|++ +.+...+..+....++++++|.+.|.+.+..|. .+.|.+.+.+.+++.++.+
T Consensus 312 ~~~~~~--~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~--~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 312 EKVEHH--ELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSD--NLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred ccCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHHHHHHHHHH
Confidence 777664 456778899999999999999999999888774 3577777777776665543
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.34 E-value=1.2e-11 Score=125.88 Aligned_cols=128 Identities=10% Similarity=0.042 Sum_probs=82.4
Q ss_pred HHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccceecchhHHHhhhhhc
Q 013336 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKITYSVPFAITAELTA 368 (445)
Q Consensus 289 ~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~svP~aLls~~~~ 368 (445)
.++...+.....+++.||+|+|+...++.+++++.+.+..+.. +.+ .......+.|+. ...-.+...++.+
T Consensus 263 ~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~----~~~---~~~~~~~l~g~~--~~~~~~~~~~~~~ 333 (396)
T TIGR00882 263 GELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT----TAL---EVVILKMLHAFE--VPFLLVGCFKYIT 333 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC----ChH---HHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 4455566678889999999999999988888877655433322 322 111122223332 1111223333333
Q ss_pred c--CCCCcccchhH-HHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhe
Q 013336 369 D--SGGGQGLAIGV-LNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 427 (445)
Q Consensus 369 ~--~~~~~G~~~gi-~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~ 427 (445)
+ +.|.+++..++ .|....+++++++.+.|.+.+..|. ...|.+.+++.++.++...+
T Consensus 334 ~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~--~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 334 SQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGF--QGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhccc--HHHHHHHHHHHHHHHHHHHH
Confidence 2 12456666666 7889999999999999999998875 35788888887777766543
No 79
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.30 E-value=1e-11 Score=124.36 Aligned_cols=261 Identities=13% Similarity=0.047 Sum_probs=138.0
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHH-HHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF-LVAV 125 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f-~i~a 125 (445)
..++ +....+..+++.|..|+++|++++++...+..+|..+|+.++..+ .+.+ ..........++|+.| ++.+
T Consensus 101 ~g~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l--~~~~---~~~~~~~~~~~w~~~~~~~~~ 174 (366)
T TIGR00886 101 IGIA-GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI--IGSL---IFGAGLPAHLAWGWAFVIVPA 174 (366)
T ss_pred HHHh-chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH--HHHH---HhcccccccccccchhHHHHH
Confidence 3444 345577889999999999999999999988888888888776541 1110 0000000012578888 4334
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccccc
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 205 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
++..+..++..+.+||.|..+.++++.++ ++ + +
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~----------------------~-------~----- 207 (366)
T TIGR00886 175 GILLLPALLIFFVGADTPPGKPATGKLSF-------------KG----------------------A-------R----- 207 (366)
T ss_pred HHHHHHHHHHHHhcccCCcccccchhccc-------------cc----------------------c-------c-----
Confidence 44334444455566776532211100000 00 0 0
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHH
Q 013336 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (445)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~ 285 (445)
+. ..+...++..+.+++ | .++.+++..++.+.....+..+.+.|+.+ .++-++. + .+ +.
T Consensus 208 -~~---~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---------~----~~-~~ 266 (366)
T TIGR00886 208 -WS---VGTGALGDQLKVFRD-R-HTWILALLYSVTFGSFLGVSSIFAMFFKD-QFGLSKV---------T----AG-AY 266 (366)
T ss_pred -cc---ccchhHHHHHHHHhc-c-chhhHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHH---------H----HH-HH
Confidence 00 000111122222222 3 34555666666666666677777777765 3443321 1 12 22
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee--ccccccceecchhHHHh
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI--GANQAIKITYSVPFAIT 363 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Gi~~~~svP~aLl 363 (445)
..++.+...+..++.+++.||+|+|+.+..+....+++.....+... ..+... ..... ....+.+......++++
T Consensus 267 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~ 343 (366)
T TIGR00886 267 ASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV-SPLSLA--VFIVLFVALFFFSGAGNGSTFALV 343 (366)
T ss_pred HHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC-CcchHH--HHHHHHHHHHHHhccccchhhhcc
Confidence 23455666777888999999999998887776666555443332211 000110 01111 11111123445556777
Q ss_pred hhhhccCCCCcccchhHHHHHHHH
Q 013336 364 AELTADSGGGQGLAIGVLNLAIVI 387 (445)
Q Consensus 364 s~~~~~~~~~~G~~~gi~n~~~~l 387 (445)
.++.|+ ++|+.+|+.+....+
T Consensus 344 ~~~~~~---~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 344 PHIFRR---ATGAVSGLVGAIGNL 364 (366)
T ss_pred hhhchh---hcccHHHHHHHhccC
Confidence 787763 579999998876543
No 80
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.29 E-value=5.9e-11 Score=117.31 Aligned_cols=278 Identities=12% Similarity=0.070 Sum_probs=158.9
Q ss_pred hhHHHHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccc--hhhhcccc
Q 013336 38 FVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTS--RACCAACG 115 (445)
Q Consensus 38 ~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~--~~~~~~~~ 115 (445)
...++++.++..+....|+...+|+.|..|+|++.+.+++.+.+.++|.++||.+++.. ....-..... +.......
T Consensus 11 ~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~-i~~~~~~~~~~~~~~~~~~~ 89 (310)
T TIGR01272 11 VLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSL-ILSGAGDLSMQVATANAEAA 89 (310)
T ss_pred HHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHH-HhcCCcchhhhhhhhhHHHH
Confidence 45678889999999999999999999999999999999999999999999999999852 1000000000 00000012
Q ss_pred chhHHHHHH-HHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchh
Q 013336 116 NLKAAFLVA-VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDAN 194 (445)
Q Consensus 116 ~~~~~f~i~-ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (445)
+++++|++. ++..++.+.+.....||.+. +++++ +
T Consensus 90 ~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~--~~~~~---~--------------------------------------- 125 (310)
T TIGR01272 90 KVHTPYLLLAGALAVLAIIFAFLPLPELQE--ADVAR---V--------------------------------------- 125 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCc--ccccc---c---------------------------------------
Confidence 678888854 44444444433333454311 11000 0
Q ss_pred hhhccccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhcccccccee-eecCCCCCCChhhH
Q 013336 195 LKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGRE-VYHGDPKGNDHEVK 273 (445)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~-if~g~p~~~s~~~~ 273 (445)
.++ + .. ..+..++ .|+ +....+..|+--.+-.++..+.+.|+.+. .++-++
T Consensus 126 -------~~~--~-----~~-~~~~~~~----~~~-~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~-------- 177 (310)
T TIGR01272 126 -------SSG--D-----TT-QKTSAFQ----FTH-LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPE-------- 177 (310)
T ss_pred -------ccc--c-----cc-chhhHHh----hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCH--------
Confidence 000 0 00 0011111 122 22223344443334556666677777542 233322
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc
Q 013336 274 FYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK 353 (445)
Q Consensus 274 ~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~ 353 (445)
..+......+.....+..++.+++.||+|+||+..++.++..++++...... + . .......++|++
T Consensus 178 ------~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~----~-~---~~~~~~~l~g~~ 243 (310)
T TIGR01272 178 ------DQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTH----G-Y---VAMWFVLALGLF 243 (310)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC----C-H---HHHHHHHHHHHH
Confidence 1222334455556667788899999999999988877766666543322211 1 1 111222334544
Q ss_pred --eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCc
Q 013336 354 --ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG 406 (445)
Q Consensus 354 --~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~ 406 (445)
..++.-+++..+.+|++ .|...++. ....++..+.|.+.|.+.|..|..
T Consensus 244 ~s~i~P~~~s~a~~~~~~~---~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~ 294 (310)
T TIGR01272 244 NSIMFPTIFSLALNALGRH---TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQ 294 (310)
T ss_pred HHHHHHHHHHHHHhhhhhh---hhhhHHHH-HHHHhcchHHHHHHHHHHHhccch
Confidence 34444466677777764 24444665 456688899999999998887753
No 81
>PRK11043 putative transporter; Provisional
Probab=99.29 E-value=5.6e-11 Score=121.08 Aligned_cols=250 Identities=13% Similarity=0.039 Sum_probs=135.6
Q ss_pred ccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHH
Q 013336 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (445)
Q Consensus 49 ~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~ 128 (445)
++.........+++.|..|+++++++.+......++|..+|+.+++. ..+. .++|+.|++.+++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~--l~~~-------------~g~~~~~~~~~~~~ 170 (401)
T PRK11043 106 VGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAW--LLNH-------------FGWQAIFATLFAIT 170 (401)
T ss_pred hhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhc-------------CChHHHHHHHHHHH
Confidence 33333445567899999999999999999888889999999988876 2211 25888888776666
Q ss_pred HHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCC
Q 013336 129 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 208 (445)
Q Consensus 129 ~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (445)
++..++.. .++|++.. ++++
T Consensus 171 ~~~~~~~~-~~~~~~~~--~~~~--------------------------------------------------------- 190 (401)
T PRK11043 171 LLLILPTL-RLKPSKKA--RKQS--------------------------------------------------------- 190 (401)
T ss_pred HHHHHHHH-HcCCCCCc--cccc---------------------------------------------------------
Confidence 55544433 34443211 0000
Q ss_pred CCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHH
Q 013336 209 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 288 (445)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~ 288 (445)
..+..++++++ .|+ ++...+.......+++.+..+.+.++.+ ++.++. + .| +....
T Consensus 191 ---~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~---------~----~g-~~~~~ 246 (401)
T PRK11043 191 ---QDALTFKQLLK----SKT-YLGNVLIFAACSAAFFAWLTGSPFILEQ--MGYSPA---------D----IG-LSYVP 246 (401)
T ss_pred ---hHHHHHHHHHc----Chh-HHHHHHHHHHHHHHHHHHHHHhHHHHHH--cCCCHH---------H----HH-HHHHH
Confidence 01112333332 122 2322222222223333444445544432 232210 1 11 22334
Q ss_pred HHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhh
Q 013336 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAEL 366 (445)
Q Consensus 289 ~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~ 366 (445)
+.+...+.+++.+++.||+++|+....+.+..+++.+...+......+.+. ...+...+.|+. ....+..+...+.
T Consensus 247 ~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (401)
T PRK11043 247 QTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLV--PLLIPFCVMAAANGAIYPIVVAQALRP 324 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 455556667778899999999987766666555554433332211101110 111112223333 3333333444444
Q ss_pred hccCCCCcccchhHHHHHHHHHHHHhhhcccccccc
Q 013336 367 TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL 402 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~ 402 (445)
.|+ .+|+.+|+.|+.....-.+++.+.|.+.+.
T Consensus 325 ~~~---~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 325 FPQ---ATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred Ccc---cChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 443 579999999998887778888777777653
No 82
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.28 E-value=2.1e-11 Score=127.67 Aligned_cols=281 Identities=9% Similarity=0.000 Sum_probs=140.3
Q ss_pred hhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhhe
Q 013336 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (445)
Q Consensus 56 ~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t 135 (445)
.+...++.|..|+++|++++++......+|..++..+... ....+..... ....+||+.|++.+++.++..++.
T Consensus 142 ~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~--i~~~~~~~~~----~~~~gWr~~f~i~g~l~l~~~l~~ 215 (476)
T PLN00028 142 VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPL--VFPLIKDAGA----PSFTAWRIAFFVPGLLHIIMGILV 215 (476)
T ss_pred HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcCC----cchhhhHHHHHHHHHHHHHHHHHH
Confidence 4567789999999999999999987777777777655432 1111000000 001268999998777666655545
Q ss_pred eeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCccc
Q 013336 136 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGA 215 (445)
Q Consensus 136 ~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (445)
.+..+|.|... .++ .+ + .. +. ++.
T Consensus 216 ~~~~~~~p~~~--~~~---~~-----------~--------------------------------~~----~~----~~~ 239 (476)
T PLN00028 216 LTLGQDLPDGN--YRE---LK-----------K--------------------------------SG----TM----PKD 239 (476)
T ss_pred HHHcCcCCCCc--hhh---HH-----------h--------------------------------cC----cc----ccc
Confidence 44433333110 000 00 0 00 00 001
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHH
Q 013336 216 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGV 295 (445)
Q Consensus 216 ~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i 295 (445)
+.+..++...+.|+ .+.+++..++.+.....+..+.+.|+.+ .++-++ + ..+ ....++++.+.+
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~----------~---~a~-~~~~~~~~~~~i 303 (476)
T PLN00028 240 SFSKVLRYGVTNYR-TWILALTYGYSFGVELTMDNIIAEYFYD-RFGLSL----------E---TAG-AIAASFGLMNLF 303 (476)
T ss_pred cHHHHHHHHHcCch-hHHHHHHHHHHHHHHHHHHhHHHHHHHH-hcCCCH----------H---HHH-HHHHHHHHHHHH
Confidence 11122222223233 3444544444444444444455555543 233221 0 112 233356677788
Q ss_pred HhhhhhhhhhhcCchh-----hHH--HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhh
Q 013336 296 SSFLIEPMCRWIGSRL-----VWA--ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAEL 366 (445)
Q Consensus 296 ~s~i~~~l~~r~g~r~-----l~~--~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~ 366 (445)
..++.++++||++||+ .++ +..++.+++++...... +.+ ...+.+.+.++. .....-++++.++
T Consensus 304 g~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~----~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~ 376 (476)
T PLN00028 304 ARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN----SLG---AAIVVMILFSIFVQAACGATFGIVPFV 376 (476)
T ss_pred HHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc----hHH---HHHHHHHHHHHHHHHhhhhhcccCccc
Confidence 8899999999998652 222 23232222222111111 111 111112222222 1222234444554
Q ss_pred hccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhe
Q 013336 367 TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 427 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~ 427 (445)
.| +.+|+..|+.|....++.++++.+.+ .+..++ +...|++.+++.++++++..+
T Consensus 377 ~~---~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~-y~~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 377 SR---RSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYS-TETGISLMGVMIIACTLPVAF 431 (476)
T ss_pred Ch---hhchhhhhhhhccccHHHHHHHHHHH--hcCCcc-HhhHHHHHHHHHHHHHHHHHh
Confidence 44 35789999998887777777776543 111222 235688888888888776654
No 83
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.26 E-value=5.3e-11 Score=120.93 Aligned_cols=245 Identities=13% Similarity=0.006 Sum_probs=133.4
Q ss_pred ccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHH
Q 013336 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (445)
Q Consensus 53 ~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~ 132 (445)
.......+++.|..+++++++++++......+|..+|+.+++. ..+. ..+|+.|++.++..++..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~--l~~~-------------~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 112 VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGL--LTTL-------------FGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhc-------------cChHHHHHHHHHHHHHHH
Confidence 3344567888999999999999999999999999999988875 2221 257888888766554444
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCC
Q 013336 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (445)
Q Consensus 133 ~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (445)
++..+.+||++... +++ + +
T Consensus 177 ~~~~~~~~~~~~~~--~~~-------------------------------------------------------~----~ 195 (394)
T PRK11652 177 FSMARWMPETRPAD--ARR-------------------------------------------------------T----R 195 (394)
T ss_pred HHHHHhCCccCccc--cch-------------------------------------------------------h----H
Confidence 44445567753210 000 0 0
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHH
Q 013336 213 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 292 (445)
Q Consensus 213 ~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~ 292 (445)
.+..+++.+ + .+.++..++..+....+...+..+.+.++.+ .++.++ .+ .| +......+.
T Consensus 196 ~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~---------~~----~~-~~~~~~~~~ 255 (394)
T PRK11652 196 VLASYRTLL----S-NRRFNCYLLMLIGTLAGIAVFEACSGVLMGA-VLGLSS---------MT----VS-ILFILPIPA 255 (394)
T ss_pred HHHHHHHHH----c-ChHHHHHHHHHHHHHHHHHHHHHhChHHHHH-HcCCCH---------HH----HH-HHHHHHHHH
Confidence 112223222 2 2445555544444444555555555555554 333221 01 12 222334555
Q ss_pred HHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhc-cccccCCcceeeeccccccc--eecchhHHHhhhhhcc
Q 013336 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVI-SVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTAD 369 (445)
Q Consensus 293 ~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~ 369 (445)
..+.+.+.+++.||.+++........+.+.... ...... ..+.+ .......+.|++ .....-.+...+..|+
T Consensus 256 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 330 (394)
T PRK11652 256 AFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLM--WIPGWFGVMNVW---TLLVPAALFFFGAGMLFPLATSGAMEPFPY 330 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccccHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 666778888898988844333322222221111 111110 00111 111112223333 2233334555566653
Q ss_pred CCCCcccchhHHHHHHHHHHHHhhhccccccc
Q 013336 370 SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA 401 (445)
Q Consensus 370 ~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~ 401 (445)
.+|+..++.+....++..+++.+++.+..
T Consensus 331 ---~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 331 ---LAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 57999999999999999999988776654
No 84
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.25 E-value=2.1e-10 Score=117.82 Aligned_cols=267 Identities=12% Similarity=0.036 Sum_probs=140.7
Q ss_pred cchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHh
Q 013336 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (445)
Q Consensus 54 ~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~ 133 (445)
......+++.|..|+++|++++++......+|..+|+.+|++ +.+. .++|+.|++.+++.+++.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~--l~~~-------------~gw~~~f~~~~~~~~i~~~ 185 (413)
T PRK15403 121 IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAA--LMHF-------------VHWKVLFAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHh-------------cCHHHHHHHHHHHHHHHHH
Confidence 345567899999999999999999999999999999999976 2221 2589999888777666665
Q ss_pred heeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCc
Q 013336 134 VTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGP 213 (445)
Q Consensus 134 ~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (445)
+..+.+||++.. ++++. ..
T Consensus 186 ~~~~~lp~~~~~--~~~~~-----------------------------------------------------------~~ 204 (413)
T PRK15403 186 GLLLAMPETVKR--GAVPF-----------------------------------------------------------SA 204 (413)
T ss_pred HHHHhCCCCccc--cCCCC-----------------------------------------------------------Ch
Confidence 555567876421 00000 00
Q ss_pred cchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHH
Q 013336 214 GAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVL 293 (445)
Q Consensus 214 ~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~ 293 (445)
+..++++.+-+++ |.++..++..++.+...+.+..+.+.++.+ .++.++. + .+ +..+......
T Consensus 205 ~~~~~~~~~ll~~--~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~-~~g~s~~---------~----~g-l~~~~~~~~~ 267 (413)
T PRK15403 205 KSVLRDFRNVFRN--RLFLTGAATLSLSYIPMMSWVAVSPVILID-AGGMTTS---------Q----FA-WTQVPVFGAV 267 (413)
T ss_pred HHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHhChHHHHH-hcCCCHH---------H----HH-HHHHHHHHHH
Confidence 1112222222222 566666667677777777777777777665 4444321 1 11 1122223344
Q ss_pred HHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccceecchhHHHhhhhhccCCCC
Q 013336 294 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKITYSVPFAITAELTADSGGG 373 (445)
Q Consensus 294 ~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~svP~aLls~~~~~~~~~ 373 (445)
.+.+.+.+++.++..+++..........++.+.+.+......+.+. ...+...+.+++.....|-..-....+.+ ..
T Consensus 268 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~--~~~~~~~l~~~G~~~~~p~~~~~al~~~~-~~ 344 (413)
T PRK15403 268 IVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWL--WSVLGTSLYAFGIGLIFPTLFRFTLFSNN-LP 344 (413)
T ss_pred HHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHH--HHHHHHHHHHHHHHHHhHHHHHHHhccCC-CC
Confidence 4556666676644444343322222222222222211100102110 01112222333322222322111223322 13
Q ss_pred cccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHH
Q 013336 374 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSAL 419 (445)
Q Consensus 374 ~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~l 419 (445)
.|+..|+.+......-.+++...+.+.+. +. ...|...++++.
T Consensus 345 ~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~--~~~~~~~~~~~~ 387 (413)
T PRK15403 345 KGTVSASLNMVILMVMAVSVEIGRWLWFN-GG--RLPFHLLAVVAG 387 (413)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CC--chHHHHHHHHHH
Confidence 68888888888877777777777776655 32 234544444433
No 85
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.24 E-value=5.2e-11 Score=119.29 Aligned_cols=245 Identities=10% Similarity=0.061 Sum_probs=142.9
Q ss_pred cchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHh
Q 013336 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (445)
Q Consensus 54 ~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~ 133 (445)
......+++.|..| ++|++++++.....++|..+|+.++.. +.+.. +..+|..|.+.+++.+++..
T Consensus 104 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~--l~~~~-----------~~~w~~~f~~~~~~~~~~~~ 169 (355)
T TIGR00896 104 INVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVP--LAQHS-----------GGHWQQALAWWALPALLALL 169 (355)
T ss_pred HhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHH--HHHhh-----------hhhHHHHHHHHHHHHHHHHH
Confidence 34455667778775 689999999999999999999887764 22111 12478888765554433322
Q ss_pred heeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCc
Q 013336 134 VTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGP 213 (445)
Q Consensus 134 ~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (445)
.++||.+..+.++++ . .
T Consensus 170 ---~~~~~~~~~~~~~~~--------------------------------------------------------~----~ 186 (355)
T TIGR00896 170 ---AWIPQVRRRVAANQT--------------------------------------------------------T----T 186 (355)
T ss_pred ---HHhhhhccccCCCCC--------------------------------------------------------C----C
Confidence 234554211100000 0 0
Q ss_pred cchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHH
Q 013336 214 GAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVL 293 (445)
Q Consensus 214 ~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~ 293 (445)
+...++.++ .+.++.+++..++...+++.+..|.+.|+.+ ++.++. ........+.+..
T Consensus 187 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~g~~~~--------------~~g~~~~~~~~~~ 245 (355)
T TIGR00896 187 RLTPVRIWR-----SPLAWQVTVFFGLQSGLYYSLIGWLPAILIS--HGASAA--------------TAGSLLALMQLAQ 245 (355)
T ss_pred CCCCchhhc-----CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCHH--------------HHHHHHHHHHHHH
Confidence 000111111 1334445555555566666666777777654 233311 1112334566777
Q ss_pred HHHhhhhhhhhhhc-CchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccC
Q 013336 294 GVSSFLIEPMCRWI-GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADS 370 (445)
Q Consensus 294 ~i~s~i~~~l~~r~-g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~ 370 (445)
++..++.+++.||+ +||+...++.++++++++...+.. +.. ...+..+.|++ ...+.-.+.+.+..+++
T Consensus 246 i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~ 317 (355)
T TIGR00896 246 AASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP----MHG----LWAWALVLGLGQGGAFPLALTLIGLRSRQA 317 (355)
T ss_pred HHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh----hhH----HHHHHHHHHHhhhhHhHHHHHHHHHhccCH
Confidence 88899999999999 456666677777777665544432 111 11123345554 22332234444444433
Q ss_pred CCCcccchhHHHHHHHHHHHHhhhccccccccccC
Q 013336 371 GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 405 (445)
Q Consensus 371 ~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~ 405 (445)
+..|..+|+.+...+++.+++|.+.|.+.|..|.
T Consensus 318 -~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 318 -AQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3568899999999999999999999999988774
No 86
>PRK10133 L-fucose transporter; Provisional
Probab=99.20 E-value=2.9e-10 Score=117.80 Aligned_cols=288 Identities=12% Similarity=0.048 Sum_probs=152.8
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhc--------cc-ch--hhh-c
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPF--------LT-SR--ACC-A 112 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~--------~~-~~--~~~-~ 112 (445)
.+..++....+.+..+++.|..|+++|++..+.......+|..+|+++|+..-.. ..+. +. .. .++ .
T Consensus 125 ~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~-~~~~~~~~~~~~l~~~~~~~w~~~ 203 (438)
T PRK10133 125 FIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILS-NVPHQSQDVLDKMTPEQLSAYKHS 203 (438)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccchhhhhccChhhHHHHHHH
Confidence 4456666778888999999987777777788898999999999999887631000 0000 00 00 000 0
Q ss_pred cccchhHHHHH-HHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCccc
Q 013336 113 ACGNLKAAFLV-AVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHES 191 (445)
Q Consensus 113 ~~~~~~~~f~i-~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (445)
...++|++|+. ..+..++..++.....||.+. ++.+ +++
T Consensus 204 ~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~---~~~~-~~~------------------------------------ 243 (438)
T PRK10133 204 LVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS---DNHS-DAK------------------------------------ 243 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---cccc-ccc------------------------------------
Confidence 01256777754 333333333333333444211 1000 000
Q ss_pred chhhhhccccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChh
Q 013336 192 DANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHE 271 (445)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~ 271 (445)
+ ++...+.+++++ .|+ ++...+..++...+......|.+.|+-|..++-+|
T Consensus 244 ---------------~---~~~~~~~~~ll~----~~~-~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~------ 294 (438)
T PRK10133 244 ---------------Q---GSFSASLSRLAR----IRH-WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTA------ 294 (438)
T ss_pred ---------------c---cchhhhHHHHHh----Cch-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCH------
Confidence 0 000111232222 233 33333444444445444555556564332344332
Q ss_pred hHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccc
Q 013336 272 VKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQA 351 (445)
Q Consensus 272 ~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 351 (445)
....+.+..+.+...+..++.+++.||+|+|++...+.++.+++++...+.. +.. .+..+.+.|
T Consensus 295 --------~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~----~~~----~~~~~~l~g 358 (438)
T PRK10133 295 --------GFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG----GHV----GLIALTLCS 358 (438)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC----ChH----HHHHHHHHH
Confidence 1223455567777778899999999999999998887766665544332221 211 122233455
Q ss_pred cc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHH
Q 013336 352 IK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 423 (445)
Q Consensus 352 i~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~ 423 (445)
++ ...+.-+++..+..|++ .|...++.+.. .++..+.|.+.|.+.+..|+- ...|++-.++.+...+
T Consensus 359 lg~~~i~P~~~s~a~~~~~~~---~~~as~l~~~~-~~g~~~~~~i~G~l~~~~g~~-~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQD---TKYGSSFIVMT-IIGGGIVTPVMGFVSDAAGNI-PTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHHHHHHcccchh---hccchhHHhHH-hccchHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHH
Confidence 54 44444466666766653 46667877654 466777888888887877621 2345544443333333
No 87
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.20 E-value=2e-10 Score=120.05 Aligned_cols=303 Identities=12% Similarity=0.052 Sum_probs=161.0
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHH---HHhhHHHhccccccchhhhhhcccchhhhccccchhHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWM---AVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 122 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~---~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 122 (445)
+..++......+..+++.|..+ |+|+...++.+... ++|.++|..+++. +.+.+ .++..|+
T Consensus 129 l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~--l~~~~-------------~~~~~f~ 192 (468)
T TIGR00788 129 LAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGP--LLDKT-------------LTRILFL 192 (468)
T ss_pred HHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHH--HHHhc-------------CcchHHH
Confidence 3344444566789999999999 66666555554433 4799999888876 33221 4778888
Q ss_pred HHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccc
Q 013336 123 VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKA 202 (445)
Q Consensus 123 i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (445)
+.+++.++. .+...++||++....++.+ +++. .... ...
T Consensus 193 ~~a~l~ll~-~~~~~~~~E~~~~~~~~~~-~~~~--------~~~~--------------------------~~~----- 231 (468)
T TIGR00788 193 ITAALLLLQ-LFVSNLSKERRAFVRPRIG-TYLE--------MNMA--------------------------LLT----- 231 (468)
T ss_pred HHHHHHHHH-HHHHHhccccccccccccc-ccch--------hhhh--------------------------hhh-----
Confidence 887777666 3445677886411000000 0000 0000 000
Q ss_pred cccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHH
Q 013336 203 EDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREG 282 (445)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g 282 (445)
.......+..++++++.+++ |.+++..+..|+.+........+ ..+..+...+.+|. +.|.
T Consensus 232 ----~~~~~~~~~~~~~l~~~l~~--~~i~~~l~fifl~~~~~~~~~~~-~f~~~~~~lG~s~~---------~~G~--- 292 (468)
T TIGR00788 232 ----LGVLANVKVQILGLRGAIQL--LEIAKPLIFIFLSYANLPGASGS-VFCATTQCLPGGPS---------FSGM--- 292 (468)
T ss_pred ----hhHHHHHHHHHHHHHHHHhc--HHHHHHHHHHHHHHhhcCCCCce-eEEEEcccCCCCcc---------hhhh---
Confidence 00000011224455555433 45555444444422211111101 00111112333332 2222
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccC--Ccceeee--ccccccc-eecc
Q 013336 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYS--GGIEHGI--GANQAIK-ITYS 357 (445)
Q Consensus 283 ~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~Gi~-~~~s 357 (445)
.....++..++.....+++.+|++.|+++.++.++.+++.+...+... +.+... .....++ ..+.++. ....
T Consensus 293 --~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~-~~~~~~gi~~~~~~~~~~~l~~~~~g~~~ 369 (468)
T TIGR00788 293 --SKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVK-RWNLAFGISDEVFVLGDSIIAEVLAQLKF 369 (468)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeee-ccccccCCCCeeeeeehhHHHHHHHHHHH
Confidence 122344666777888888899999999999998888876544322211 111110 0000111 1112222 1222
Q ss_pred hh-HHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccccccc-----CcchhH-HHHHHHHHHHHHHhhheecc
Q 013336 358 VP-FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG-----GGNIPA-FVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 358 vP-~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g-----~~~~~~-f~~~~v~~ll~~~~~~~~vp 430 (445)
+| .+++++..|++ ..|++.|++++...+++++++.++|.+.+..| .++.+. ..+..+..++...++ +.+|
T Consensus 370 ~~~~~~~~~~~p~~--~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~-~llP 446 (468)
T TIGR00788 370 MPFLVLLARLCPSG--CESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLL-HLLP 446 (468)
T ss_pred ccHHHHHHHhCCCC--ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHH-HhCC
Confidence 33 67778888875 67999999999999999999998888888887 433322 334555555555555 3778
No 88
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.19 E-value=1.8e-10 Score=114.88 Aligned_cols=291 Identities=13% Similarity=0.127 Sum_probs=184.0
Q ss_pred ccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccc--cccchhhhhhcccchhhhccccchhHHHHHHHHHHHH
Q 013336 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG--ASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 130 (445)
Q Consensus 53 ~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG--~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i 130 (445)
+-.+|+...+.--.|.++||+..++=+..-++|+.+.+.+. +. ... ..++|..|++.+++.++
T Consensus 133 ~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~-----~~~----------~~~w~~~f~~pgiiaii 197 (448)
T COG2271 133 MGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF-----FAF----------HGGWRAAFYFPGIIAII 197 (448)
T ss_pred CCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH-----HHh----------ccchhHHHHHHHHHHHH
Confidence 45689999999999999999999999999999988887766 32 110 13799999999888777
Q ss_pred HHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCC
Q 013336 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (445)
Q Consensus 131 ~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (445)
.-++.++..||+|...--..- + +-+. + +.+.++|+.
T Consensus 198 val~~~~~~rd~Pqs~GLP~i-e---------------~~~~----------------d-----------~~e~~~~~~- 233 (448)
T COG2271 198 VALILLFLLRDRPQSEGLPPI-E---------------EYRG----------------D-----------PLEIYEEEK- 233 (448)
T ss_pred HHHHHHHHhCCCccccCCCCH-H---------------Hhhc----------------C-----------chhhhhhhc-
Confidence 778888889998743211100 0 0000 0 000000000
Q ss_pred CCccchHHHHHHH-hccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHH
Q 013336 211 DGPGAVLVNLLTS-LRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 289 (445)
Q Consensus 211 ~~~~~~~~~~~~~-~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~ 289 (445)
.++..+.++++.. +.+ .|.++.+|++.++..+.-+++.-..+.|+.| +-|-+ . .-+.++..+|
T Consensus 234 ~~~~ls~~~i~~~YVL~-Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e-~k~~s------------~--~~a~~a~~lf 297 (448)
T COG2271 234 ENEGLTAWQIFVKYVLK-NKLIWLLALANVFVYVVRYGINDWGPLYLSE-VKGFS------------L--VKANWAISLF 297 (448)
T ss_pred cCCCccHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCC------------H--HHHHHHHHHH
Confidence 0111444555433 444 4788999999999999888898888888877 33322 1 1223566667
Q ss_pred HHHHHHHhhhhhhhhhhc--CchhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccceecchhHHHhh--
Q 013336 290 SVVLGVSSFLIEPMCRWI--GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKITYSVPFAITA-- 364 (445)
Q Consensus 290 ~i~~~i~s~i~~~l~~r~--g~r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~svP~aLls-- 364 (445)
=+.+...+++.|+++||+ |||.... +..+...++++...+.+ +... +...+.+.++|+. ..-|..|++
T Consensus 298 E~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~----~~~~-~l~~~~l~~iGf~--IyGPqmLiGl~ 370 (448)
T COG2271 298 EVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAP----NGSY-LLDAILLFIIGFL--IYGPQMLIGLA 370 (448)
T ss_pred HHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCC----CccH-HHHHHHHHHHHHH--HhhHHHHHHHH
Confidence 777788899999999997 7776544 34444444433333222 2210 1222233345533 334655544
Q ss_pred --hhhccCCCCcccchhHHHHHHHH-HHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheec
Q 013336 365 --ELTADSGGGQGLAIGVLNLAIVI-PQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 429 (445)
Q Consensus 365 --~~~~~~~~~~G~~~gi~n~~~~l-~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~v 429 (445)
|..|++ ..|+.-|..+.+.++ +...+....|.+.|.+|=+ ..|++..+.++++.++...+.
T Consensus 371 a~e~~pK~--AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~--g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 371 AAEFVPKK--AAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWD--GGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred HhccccHh--hccchhchhhhHHHHhhHHhcCCcceeeEecCCCc--chHHHHHHHHHHHHHHHHHHH
Confidence 455654 579999999999999 9999999999988876532 356666666666666554333
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.19 E-value=1.4e-10 Score=114.03 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=55.6
Q ss_pred cchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccc-cchhHHHHHHHHHHHHHH
Q 013336 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAAC-GNLKAAFLVAVVFLTLCA 132 (445)
Q Consensus 54 ~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~i~ai~~~i~~ 132 (445)
.-+++||+++|+++++.|+++++..+...++|.++||.||++ +.+ |. + ..+ .-+..+..+..++....+
T Consensus 137 nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgy--la~-f~----~---~~g~~p~alP~~~v~i~a~~~v 206 (451)
T KOG2615|consen 137 NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGY--LAQ-FS----S---ISGSYPFALPCLLVFILAAGDV 206 (451)
T ss_pred chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhH--HHh-hH----h---hhccCchHHHHHHHHHHHHHHH
Confidence 347899999999999999999999999999999999999998 443 11 0 000 012222333444444435
Q ss_pred hheeeEeecc
Q 013336 133 LVTIYFADEV 142 (445)
Q Consensus 133 ~~t~~~v~E~ 142 (445)
...++++||+
T Consensus 207 ~~~~~~lpET 216 (451)
T KOG2615|consen 207 TFFPWFLPET 216 (451)
T ss_pred HHHHHhCCcc
Confidence 5667788997
No 90
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.15 E-value=2.6e-09 Score=106.90 Aligned_cols=271 Identities=15% Similarity=0.158 Sum_probs=153.4
Q ss_pred hhHHHHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccch
Q 013336 38 FVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNL 117 (445)
Q Consensus 38 ~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~ 117 (445)
+++.+.+.+..++.++.++|.-|++.|.+|+|+|+++.++.=.|.-+|.+++..+.+.+ ++++-+ ..+
T Consensus 90 ~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~l-L~~~s~-----------~rL 157 (403)
T PF03209_consen 90 ALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRL-LDPFSP-----------ERL 157 (403)
T ss_pred HHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHH-ccccCH-----------HHH
Confidence 35557888899999999999999999999999999999999999999999987766542 332110 122
Q ss_pred hHHHHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhh
Q 013336 118 KAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKH 197 (445)
Q Consensus 118 ~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (445)
..++...+++.++..++.+ +=-|++.....+.+
T Consensus 158 ~~v~~~~a~i~~~l~~ia~-wg~E~r~~~~~~~~---------------------------------------------- 190 (403)
T PF03209_consen 158 IQVIQGVALIALLLNLIAL-WGQEPRRSRRAAAA---------------------------------------------- 190 (403)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhcccCCcccccCC----------------------------------------------
Confidence 2233222222222222222 23343221111000
Q ss_pred ccccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHH-H
Q 013336 198 ISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFY-D 276 (445)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y-~ 276 (445)
..++.++++.++.+..-|+ -+++.+..++.-++++.=-.-.-.|=+| +|+-++.+ ++....+ .
T Consensus 191 -------------~~~~~~f~~a~~~~~~~~~-a~~f~~fl~l~t~a~~~QD~iLEPygg~-Vfgmsv~e-TT~Lta~~~ 254 (403)
T PF03209_consen 191 -------------ERPRPPFREAWRQVWASPQ-ARRFFVFLFLGTLAFFMQDVILEPYGGE-VFGMSVGE-TTRLTAFWG 254 (403)
T ss_pred -------------CCCCccHHHHHHHHHhCCC-hhHHHHHHHHHHHHHHhhHHHcCCchhH-HcCCCHHH-HHHHHHHHH
Confidence 0122345666666665554 4556666666666655433334444454 55544321 1111111 1
Q ss_pred HHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--e
Q 013336 277 QGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--I 354 (445)
Q Consensus 277 ~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~ 354 (445)
-|+ + .+++. ..-.+.+|.+++++-.+|+...++++....+..... +.+ ..-....++|++ +
T Consensus 255 ~G~------L-----~G~~~--~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~-~~~---~~~~~~~l~G~g~G~ 317 (403)
T PF03209_consen 255 GGT------L-----LGMLL--AGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLG-SPW---LFRPGVFLLGLGNGL 317 (403)
T ss_pred HHH------H-----HHHHH--HHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcc-cch---HHHHHHHHHHHhhhH
Confidence 111 1 11111 111344688888888889999998887665554332 221 111123346655 2
Q ss_pred ecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccccc
Q 013336 355 TYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL 402 (445)
Q Consensus 355 ~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~ 402 (445)
+..--.++.-+..+++ ..|++||....+..+++-++...+|.+.|.
T Consensus 318 f~vgals~mM~lt~~~--~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 318 FTVGALSLMMDLTSAG--RAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHHHHHhCCCCc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211123334444443 579999999999999999999999987664
No 91
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.12 E-value=9e-11 Score=124.08 Aligned_cols=316 Identities=16% Similarity=0.172 Sum_probs=177.2
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++..........+++|.+++++|+.+..+ ......|+.+++.++++ +. .+||+.+++..
T Consensus 180 l~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~-----~~------------~~Wr~~~~~~~ 241 (521)
T KOG0255|consen 180 LSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAY-----IT------------RDWRWLFWIIS 241 (521)
T ss_pred HHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHH-----HH------------hhHHHHHHHHH
Confidence 45666777888999999999999999999999 77888888888877765 21 26899999988
Q ss_pred HHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcc--CCcccchhhhhcccccc
Q 013336 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVE--SGHESDANLKHISKKAE 203 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 203 (445)
++..+.+++ .+..||+|.+...+++.+++.+.++. ..|. ++...+ +..+++. .+ +..
T Consensus 242 ~~~~~~~~~-~~l~~Es~rwl~~~g~~~~a~~~l~~-----~a~~----------n~~~~~~~~~~~~~~-~~---~~~- 300 (521)
T KOG0255|consen 242 IPSGLFLLL-WFLPPESPRWLLSKGRIDEAIKILKK-----IAKL----------NGRKLSVKELLRLEL-LL---RPL- 300 (521)
T ss_pred HHHHHHHHH-HHccCcChHHHHHcCchHHHHHHHHH-----HHhh----------cCCCCCcHHHHHHHH-Hh---hHh-
Confidence 877776665 55567999988777654333211100 0000 000000 0000000 00 000
Q ss_pred ccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHH
Q 013336 204 DTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGA 283 (445)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~ 283 (445)
+.....++..+.. +...|+ ++...+...+.|+.. .+.+|...+..+ .++++ ..
T Consensus 301 ---~~~~~~~~~~~~~----l~~~~~-l~~~~~~~~~~~~~~-~~~y~gl~~~~~-~lg~~----------------~~- 353 (521)
T KOG0255|consen 301 ---KLLFTEPKISFLD----LFRTPR-LRYRTLYLLFIWFVF-SLVYYGLSLNVS-GLGGN----------------IY- 353 (521)
T ss_pred ---hhhccCCCCchhh----hhcCHH-HHHHHHHHHHHHHHH-hHHHHhhhhhhh-hcCch----------------HH-
Confidence 0000011223333 333344 444444555556321 222222222111 12222 11
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccc---cc-eecchh
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQA---IK-ITYSVP 359 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~G---i~-~~~svP 359 (445)
....+.+.+-...-...+.+.+++|||.....++++..++++..++..... +.+ .....+++| +. ....+
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~- 427 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDL-GGW----LHWILPLLGKFFIGSAFNLI- 427 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccc-hhH----HHHHHHHHHHHHHHHHHHHH-
Confidence 111112222223333446888999999999999999999888777665221 100 111222232 22 22333
Q ss_pred HHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCCcc
Q 013336 360 FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFR 438 (445)
Q Consensus 360 ~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~~~ 438 (445)
+...+|++|... ++...|..++...++.+++|.+.-.... ... ...+...+..+.+++.++.+++|||+++.+-
T Consensus 428 ~~~~~el~pt~~--r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~ 501 (521)
T KOG0255|consen 428 FLYSAELIPTVV--RNTAVGAISAAARLGSILAPLFPLLLRQ-MFP--LLGLILFGWLALLLGLLSLLLLPETKGKPLP 501 (521)
T ss_pred HHHHHhhccHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcc--cchHHHHHHHHHHHHHHHHhcCcccCCCCCc
Confidence 777899999874 4666799999999999888876433322 111 1223335666677777777899999998763
No 92
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.10 E-value=4.7e-10 Score=116.43 Aligned_cols=299 Identities=15% Similarity=0.155 Sum_probs=184.8
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHH
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 124 (445)
++..++..+..+.....+.--+|++||++..++......+|.+++..+++. +-+. ...|+.+||+.
T Consensus 136 ~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~--lc~s------------~~GW~sifY~~ 201 (466)
T KOG2532|consen 136 FLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGL--LCES------------SLGWPSIFYVF 201 (466)
T ss_pred HHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHH--Hhcc------------CCCCchHHHHH
Confidence 334555666777888888999999999999999999999999999987776 2221 12589999998
Q ss_pred HHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccc
Q 013336 125 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (445)
Q Consensus 125 ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
+++.++..++-.+...|+|.. ++.- . ++|.+.+++.| ..+
T Consensus 202 g~~g~i~~~~w~~~~~d~P~~--h~~i-s-------~~El~~I~~~k-----------------------------~~~- 241 (466)
T KOG2532|consen 202 GIVGLIWFILWFLFYSDSPSK--HPNI-S-------EKELKYIEKGK-----------------------------SEA- 241 (466)
T ss_pred HHHHHHHHHHHHHHhcCCccc--CCCC-C-------HHHHHHHHhcc-----------------------------ccc-
Confidence 887777666666667777632 2111 0 00000010000 000
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHH
Q 013336 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (445)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~ 284 (445)
+.. +..+-++++++++ ++++.+++.+|....+++.++.|.+.|+.| +.+-|-+ +.|.
T Consensus 242 --~~~-~~~~vP~~~i~ts-----~~vwai~~~~f~~~~~~~~l~~y~PtY~~~-VL~f~v~---------~~G~----- 298 (466)
T KOG2532|consen 242 --HVK-KKPPVPYKAILTS-----PPVWAIWISAFGGNWGFYLLLTYLPTYLKE-VLGFDVR---------ETGF----- 298 (466)
T ss_pred --ccC-CCCCCCHHHHHcC-----HHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HhCCChh---------hhhH-----
Confidence 000 1134567877775 678999999999999999999999999998 6665522 2221
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCc--------hhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeecc-ccccce
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGS--------RLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGA-NQAIKI 354 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~--------r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gi~~ 354 (445)
--.+--+...++.++.+.++||+-+ ||++- ++..+.+++++.++++... +.+ .+++++. ..++..
T Consensus 299 ~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~--~~~---~a~~~l~~~~~~~g 373 (466)
T KOG2532|consen 299 LSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDE--HRL---LAVILLTIAIGLSG 373 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCC--cch---HHHHHHHHHHHHcc
Confidence 1123334555666677777777633 34443 6788888877776666421 111 1222211 122221
Q ss_pred ecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccc-c-ccCcchhHHHHHHHHHHHHHHhhhee
Q 013336 355 TYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA-L-FGGGNIPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 355 ~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~-~-~g~~~~~~f~~~~v~~ll~~~~~~~~ 428 (445)
.+..-+..-...+ .++..|..||+.|....++++++|.+.|.++. . .... ..+|.+.+++.+++.++-.++
T Consensus 374 ~~~~Gf~~~~~~~--apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW-~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 374 FNISGFYKNHQDI--APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEW-RIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred cchhhhHhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHH-HHHHHHHHHHHHHhchheeEe
Confidence 2221122122221 22367999999999999999999999999884 1 1111 346888888777776544333
No 93
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.09 E-value=6.8e-10 Score=108.58 Aligned_cols=326 Identities=13% Similarity=0.136 Sum_probs=168.7
Q ss_pred chhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhh
Q 013336 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (445)
Q Consensus 55 ~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~ 134 (445)
.+..-++-.+..|..+|..-.-+. ++..+|++..-.+. |..... -.+|+..+...+++.+. ..
T Consensus 183 ~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~la----w~vm~~-----------~gwr~~l~~~~~pl~~~-a~ 245 (528)
T KOG0253|consen 183 LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLA----WGVMSN-----------FGWRYLLFTSSTPLMFA-AR 245 (528)
T ss_pred ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHH----HHHHHh-----------hhHHHHHHHHHhHHHHH-HH
Confidence 455677778999999998877777 77888888887655 322211 15777766666554443 45
Q ss_pred eeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccc-hhhhhccccccccCCCCCCCc
Q 013336 135 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESD-ANLKHISKKAEDTNGSFNDGP 213 (445)
Q Consensus 135 t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 213 (445)
.++++||+|+...-+.+..+|. .+-|+..+.. +.+++.....+...+ ..|+| .+.+.+ ..+++ ++.
T Consensus 246 f~~w~~ESpRf~~~~G~~~kAl---etL~kiArmN-g~qlplgvl~~s~~~--~~e~e~~~~~~~--~~~a~-----ke~ 312 (528)
T KOG0253|consen 246 FLVWVYESPRFYLAKGDDYKAL---ETLHKIARMN-GKQLPLGVLESSAID--RQEQEESDLDDS--KSSAA-----KEV 312 (528)
T ss_pred HHhhcccCcchhhhcCChHHHH---HHHHHHHHhc-CCCCCcceeeeehhh--hhhhhhhchhhh--hhccc-----ccc
Confidence 7889999998766554322220 0101110000 011111110000000 01111 111000 00111 122
Q ss_pred cchHHHHHHHhccCCHHHHHHHHHHHHHHHh----hhhhhhccccccce-eeecC----CCCC-----CC--hhhHHHHH
Q 013336 214 GAVLVNLLTSLRHLPPAMHVVLIVMALTWLS----WFPFFLFDTDWMGR-EVYHG----DPKG-----ND--HEVKFYDQ 277 (445)
Q Consensus 214 ~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g----~~~~~~y~t~~v~~-~if~g----~p~~-----~s--~~~~~y~~ 277 (445)
....++++. |+ +|+--+.+-..|++ +++.....|.+... ..++. .|.. |. ...+.|.+
T Consensus 313 rg~~~nLls-----p~-lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd 386 (528)
T KOG0253|consen 313 RGGTTNLLS-----PK-LRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD 386 (528)
T ss_pred ccchHhhcC-----hH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH
Confidence 333444332 33 33332223233332 23322223322111 01111 0110 11 11223332
Q ss_pred HhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccc--ccccee
Q 013336 278 GVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGAN--QAIKIT 355 (445)
Q Consensus 278 gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Gi~~~ 355 (445)
+++.+..-+=..++.+.++||+|||+....+.++++++++....... + |.+ .++... ..+...
T Consensus 387 --------llitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~-r-n~~-----tvllf~arafisg~ 451 (528)
T KOG0253|consen 387 --------LLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT-R-NAY-----TVLLFTARAFISGA 451 (528)
T ss_pred --------HHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC-c-chh-----HHHHHHHHHHHhch
Confidence 12233344444677889999999999999999999998776544431 1 322 122111 112244
Q ss_pred cchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCC
Q 013336 356 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSN 435 (445)
Q Consensus 356 ~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~ 435 (445)
+.+-|...-|++|... +++..|.-+.+.=++-++.|+++ ...+. .. +. ...+.+.++++++++++++-=|||||
T Consensus 452 fqvaYvYtPEVyPTav--RatgvGtcSsmaRIggI~~p~iA-~~~e~-s~-sl-~i~vy~~~~ilagIavcffPiEtkGR 525 (528)
T KOG0253|consen 452 FQVAYVYTPEVYPTAV--RATGVGTCSSMARIGGIFSPVIA-MRAEL-ST-SL-PIFVYGALFILAGIAVCFFPIETKGR 525 (528)
T ss_pred heEEEEecCcccchhh--hhcchhhhhhHHhhhhhhhhHHH-HHhcc-ce-ee-hHHHHHHHHHHHHHHheeeeeccCCC
Confidence 5566677789999875 46667888999999999999887 22222 21 23 35566666788889887666699999
Q ss_pred Cc
Q 013336 436 SF 437 (445)
Q Consensus 436 ~~ 437 (445)
+.
T Consensus 526 ~l 527 (528)
T KOG0253|consen 526 SL 527 (528)
T ss_pred CC
Confidence 74
No 94
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=3.9e-10 Score=112.60 Aligned_cols=300 Identities=12% Similarity=0.055 Sum_probs=184.9
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhcccc--c-----cchhhhhhcccchhhhccc
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA--S-----GSWHRWFPFLTSRACCAAC 114 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~--~-----~~~~~~~~~~~~~~~~~~~ 114 (445)
+.+.+.+.+.+..+.+-.|++.|.+++++-++..+..=....+|.++-..... + ..+... .+.. -...+
T Consensus 120 ~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~--l~~l--~~~~~ 195 (438)
T COG2270 120 LFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITII--LLGL--PPADG 195 (438)
T ss_pred HHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEE--eecc--Ccccc
Confidence 44556788888899999999999999988777765544444444433222210 0 001100 0000 01124
Q ss_pred cchhHHHHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchh
Q 013336 115 GNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDAN 194 (445)
Q Consensus 115 ~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (445)
...|..+.++++-.++..+..++.+|+.+....+..+
T Consensus 196 ~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~------------------------------------------- 232 (438)
T COG2270 196 EDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPT------------------------------------------- 232 (438)
T ss_pred ccchhHHHHHHHHHHHHHhHHHhcccccccccccchH-------------------------------------------
Confidence 5788999999988888888888888876532101000
Q ss_pred hhhccccccccCCCCCCCccchHHHHHHHhccC--CHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhh
Q 013336 195 LKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHL--PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEV 272 (445)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~ 272 (445)
...+.+|+++.++++. -+.+..+.+..++-.-|..+...+.+.|-.. .|+-+.
T Consensus 233 -----------------~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~-~~gls~------- 287 (438)
T COG2270 233 -----------------ALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAA-DLGLSS------- 287 (438)
T ss_pred -----------------HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHH-HcCccH-------
Confidence 0112233333222221 1467777888888888888888777755432 333220
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeec-cccc
Q 013336 273 KFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIG-ANQA 351 (445)
Q Consensus 273 ~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G 351 (445)
.++..+++ .-++++++.+++.|+|.||+|.|++..++.++..+..+...+.. ... .+.++ .++|
T Consensus 288 ------~~lll~g~-~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~----~~~----~f~i~gll~g 352 (438)
T COG2270 288 ------TELLLIGI-ALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE----GEL----DFWILGLLVG 352 (438)
T ss_pred ------HHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc----ccH----HHHHHHHHHH
Confidence 12333343 44778889999999999999999999888777665443322221 111 11112 2244
Q ss_pred cc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheec
Q 013336 352 IK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 429 (445)
Q Consensus 352 i~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~v 429 (445)
.. -.++.--++.++..|++ +.|+++|++|++--...+++|...+.+.+..|.. ..-+..-.++.+++ +..+.++
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~--k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~-r~g~~~i~vll~iG-l~~L~~v 428 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKG--KEGRFFGLYALTGRAASFLGPFLVAVITQITGSS-RAGVLSIIVLLLIG-LLLLLRV 428 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCc--cccceeehhhhhhhHHHHHHHHHHHHHHHHhcch-hhHHHHHHHHHHhh-HhhEEee
Confidence 33 34555568899999996 6799999999999999999999999999988865 33344444444444 3355677
Q ss_pred cCC
Q 013336 430 PHL 432 (445)
Q Consensus 430 pe~ 432 (445)
|+.
T Consensus 429 ~~~ 431 (438)
T COG2270 429 KVP 431 (438)
T ss_pred cCC
Confidence 765
No 95
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.08 E-value=1.8e-09 Score=111.71 Aligned_cols=283 Identities=10% Similarity=-0.005 Sum_probs=163.6
Q ss_pred ccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhcccccc-chhhhhhcccchh-hh--ccccchhHHHHHHHHHH
Q 013336 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG-SWHRWFPFLTSRA-CC--AACGNLKAAFLVAVVFL 128 (445)
Q Consensus 53 ~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~-~~~~~~~~~~~~~-~~--~~~~~~~~~f~i~ai~~ 128 (445)
...++....+....|+++||+++++.....++|..++..++-.. .+. .+...+... .. .....+|.++.+.+++.
T Consensus 143 ~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~-l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~ 221 (462)
T PRK15034 143 ANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP-VFAFLGVNGVPQADGSVMSLANAAWIWVPLL 221 (462)
T ss_pred HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHhccccccccccchHHHHHHHHHHHHHH
Confidence 35578889999999999999999999877777776655544210 000 011000000 00 00113666666666655
Q ss_pred HHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCC
Q 013336 129 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 208 (445)
Q Consensus 129 ~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (445)
++..++..+..+|.|. +
T Consensus 222 iv~~i~~~~~~~~~~~---~------------------------------------------------------------ 238 (462)
T PRK15034 222 AIATIAAWSGMNDIAS---S------------------------------------------------------------ 238 (462)
T ss_pred HHHHHHHHHhCCCccc---c------------------------------------------------------------
Confidence 5555555554444321 0
Q ss_pred CCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHH
Q 013336 209 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 288 (445)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~ 288 (445)
+.++++.... .++|+ .+.+++..+.+.-++.++..|+++|..+ .|.. ....+. ..+
T Consensus 239 -----~~~~~~~~~v-lk~~~-~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~------------~~~l~~----~~l 294 (462)
T PRK15034 239 -----RASIADQLPV-LQRLH-LWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPD------------VNILRL----AFF 294 (462)
T ss_pred -----ccCHHHHHHH-hCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCh------------HHHHHH----HHH
Confidence 0112333333 33454 5777777777766777777778777654 3311 000111 122
Q ss_pred HHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccc-cCCcceee----eccccccceecchhHHHh
Q 013336 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVRE-YSGGIEHG----IGANQAIKITYSVPFAIT 363 (445)
Q Consensus 289 ~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~Gi~~~~svP~aLl 363 (445)
..+...+...+.|+++||+|+||+..++.+.+.++........ +.+. ...+...+ +....|+ .+.--|.++
T Consensus 295 ~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~l--p~~~~~~~~~~~~~~~~l~~~~G~--gngsvfk~i 370 (462)
T PRK15034 295 GPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTL--PGTGSGNFIAFYAVFMGLFLTAGL--GSGSTFQMI 370 (462)
T ss_pred HHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--ccccccHHHHHHHHHHHHHHHhcc--cchHHHHhh
Confidence 3456667778899999999999999988877766543322211 1000 00000011 1122343 344456667
Q ss_pred hhhhcc-------------------CCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHh
Q 013336 364 AELTAD-------------------SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVV 424 (445)
Q Consensus 364 s~~~~~-------------------~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~ 424 (445)
.+++|+ .+++.|...|+.+..-.++-++.|.++|...+..|+. ...|+...++.+++.+.
T Consensus 371 p~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~-~~~~~~~~~~~~~~~~~ 449 (462)
T PRK15034 371 AVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSP-VGAMKVFLIFYIVCVLL 449 (462)
T ss_pred HHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCc-HHHHHHHHHHHHHHHHH
Confidence 777763 0124688899999999999999999999888888764 45677777777777666
Q ss_pred hhee
Q 013336 425 ATLK 428 (445)
Q Consensus 425 ~~~~ 428 (445)
++.+
T Consensus 450 ~w~~ 453 (462)
T PRK15034 450 TWLV 453 (462)
T ss_pred HHHH
Confidence 6643
No 96
>PRK10054 putative transporter; Provisional
Probab=98.99 E-value=8.9e-10 Score=112.48 Aligned_cols=180 Identities=11% Similarity=-0.032 Sum_probs=125.2
Q ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhh
Q 013336 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (445)
Q Consensus 226 ~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~ 305 (445)
++||+.+.+.+..++.+.++.....+.+.|+.+ .++-++ . ..| +.+..+.+...+...+.|+++|
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~-~~g~s~----------~---~~g-~~~s~~~~~~~~~~~~~G~l~D 68 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSR-QYSLSV----------D---LIG-YAMTIALTIGVVFSLGFGILAD 68 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCH----------H---HHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 457888888999999999999888888888865 344331 0 122 3444566777788899999999
Q ss_pred hcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHH
Q 013336 306 WIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNL 383 (445)
Q Consensus 306 r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~ 383 (445)
|+|||++..++.+..+++++...+.. +.+ ...+...+.|.. ....+-.++.++..|++ ++|+.+|+.+.
T Consensus 69 r~g~k~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~ 139 (395)
T PRK10054 69 KFDKKRYMLLAITAFASGFIAIPLVN----NVT---LVVLFFALINCAYSVFSTVLKAWFADNLSST--SKTKIFSLNYT 139 (395)
T ss_pred hcCcchhHHHHHHHHHHHHHHHHHHh----HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHh--HHHHHHHHHHH
Confidence 99999999998888887766655543 211 111112223322 22233346677777765 57899999999
Q ss_pred HHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 384 AIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 384 ~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
...++.++++.+.+.+.+ .|. ..+|++.+++.+++.++..+++||+
T Consensus 140 ~~~lg~~igp~l~~~l~~-~g~--~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 140 MLNIGWTVGPPLGTLLVM-QSI--NLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHHHH-hcc--CcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999887764 443 3578888887777766665556554
No 97
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.92 E-value=7.5e-09 Score=104.99 Aligned_cols=288 Identities=13% Similarity=0.122 Sum_probs=156.2
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHH
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai 126 (445)
+.+..|+..+...||+.... ++.+-=.|-.-++.++|-+++..+++++ -+. +-+..|+++.+
T Consensus 114 l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L--~~i--------------~p~~~fwi~s~ 175 (412)
T PF01306_consen 114 LGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGIL--FNI--------------NPNIIFWIASA 175 (412)
T ss_dssp TTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHH--HHH--------------HHHHHHHHHHH
T ss_pred HHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhhee--eee--------------CccHHHHHHHH
Confidence 34445566666777776654 4445566777778888888888888762 111 34566776555
Q ss_pred HHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccC
Q 013336 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (445)
Q Consensus 127 ~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
..++..++.++.-||.+......+.
T Consensus 176 ~~~il~lll~~~~~~~~~~~~~~~~------------------------------------------------------- 200 (412)
T PF01306_consen 176 AAIILLLLLLLLKPDVPPQAEVADA------------------------------------------------------- 200 (412)
T ss_dssp HHHHHHHHHHSS---SSSSS-SSTT-------------------------------------------------------
T ss_pred HHHHHHHHHHHcCCcCchhhhhhcc-------------------------------------------------------
Confidence 4444444334444443321111100
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH
Q 013336 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (445)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l 286 (445)
..++.++.++|++.+-++. |.++.+.+.....+..+..+-..++.|... .|+.. ++|.++ +|.
T Consensus 201 -~~~~~~~~~~~~~~~l~k~--~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~-~f~~~-----------~~g~~~--~G~ 263 (412)
T PF01306_consen 201 -LGAKKDKVSLKDVLSLFKM--RNFWFFVLFVIGVAAIYDVFDQQFPIYFAS-FFQSA-----------GQGNQM--YGY 263 (412)
T ss_dssp -SSS------HHHHHHHTTS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSSSH-----------HHHHHH--HHH
T ss_pred -cccCCCCCcHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhccc-----------ccChhH--HhH
Confidence 0000123356766655443 556666555555555555544334433332 33311 222222 222
Q ss_pred H--HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 287 L--LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 287 ~--~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
+ +.-+.-++.=.+.|++.+|+|.|+.++++..++++=.+++++.+ +.+ ....+-.+=|+- ......+-.
T Consensus 264 l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~----~~~---~i~~~klLH~~e~~l~lva~fkY 336 (412)
T PF01306_consen 264 LWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT----NPW---VISLIKLLHALEFPLLLVAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT------SHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc----chH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 23344445566789999999999999998888877666666664 432 111111122211 112222344
Q ss_pred hhhhhccCCCCcccchhH-HHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCC
Q 013336 363 TAELTADSGGGQGLAIGV-LNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSN 435 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi-~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~ 435 (445)
+++..|++ -..+...+ .+.+..+++++.+..+|.+.|..|.+ ..|++-+.+.+...++..+.++++|..
T Consensus 337 I~~~fd~r--lsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~--~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 337 ITAHFDKR--LSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQ--HTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHS-GG--GHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHhCCHh--HHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcH--HHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 56666653 45666666 58999999999999999999999854 367777777777777777777765553
No 98
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.91 E-value=2.4e-09 Score=109.47 Aligned_cols=179 Identities=14% Similarity=0.053 Sum_probs=125.3
Q ss_pred ccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 013336 225 RHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMC 304 (445)
Q Consensus 225 ~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~ 304 (445)
+++|| ..+....++.+.+.+.+..|.+.|+.+ ..+.++ . ..| +.+..+.+...+.+.+.++++
T Consensus 8 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~---------~----~~g-l~~~~~~l~~~~~~~~~G~l~ 70 (400)
T PRK11646 8 RNLGK--YFLLIDNMLVVLGFFVVFPLISIRFVD-QLGWAA---------V----MVG-IALGLRQFIQQGLGIFGGAIA 70 (400)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCcH---------H----HHH-HHHHHHHHHHHHHHhhhhHHH
Confidence 46677 556678999999999888888887654 233221 1 122 333445666777788999999
Q ss_pred hhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHH
Q 013336 305 RWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLN 382 (445)
Q Consensus 305 ~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n 382 (445)
||+|||++.+.+.++.+++++.+.+.. +.+ ...+...+.|++ .....-.+++.+..|++ ++|+.+|+.+
T Consensus 71 dr~g~k~~l~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~a~~~~~ 141 (400)
T PRK11646 71 DRFGAKPMIVTGMLMRAAGFATMAIAH----EPW---LLWLSCILSGLGGTLFDPPRTALVIKLIRPH--QRGRFFSLLM 141 (400)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHH
Confidence 999999999999999988877665442 222 122223345554 22222257788888875 6799999999
Q ss_pred HHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 383 LAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 383 ~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
....+++.+++.++|.+. ..|. .+.|++.+++.++++++..+++||.
T Consensus 142 ~~~~~g~~ig~~l~g~l~-~~g~--~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 142 MQDSAGAVIGALLGSWLL-QYDF--RLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHH-HhhH--HHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999887 4443 3578888887777776666667764
No 99
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.90 E-value=3.5e-09 Score=106.48 Aligned_cols=339 Identities=14% Similarity=0.077 Sum_probs=189.1
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchh--hhccccchhHHHH
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRA--CCAACGNLKAAFL 122 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~--~~~~~~~~~~~f~ 122 (445)
+++.+++..=++-+-+..+|.+.+..||.-.++.-.+.+.|.+.|..+..++ ...|---++.. -.....-||..|.
T Consensus 152 ~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv--~~~fe~~~~~~~~~~~ld~vWRl~~g 229 (538)
T KOG0252|consen 152 FLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIV--SAIFEKIFNGPSTYPHLDGVWRIIFG 229 (538)
T ss_pred HHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHH--HHHHhccCCCCCCchHHHHHHHHHHH
Confidence 5677888777777888889999999999988888888888888887766552 11111000110 0122346899999
Q ss_pred HHHHHHHHHHhheeeEeeccCCCCCCCCC-CCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccc
Q 013336 123 VAVVFLTLCALVTIYFADEVPLTVNQPNH-LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 201 (445)
Q Consensus 123 i~ai~~~i~~~~t~~~v~E~p~~~~~~~~-~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
+++++.++++.+- ..+||++.......+ .+.+. . +.+| +...+.+++...
T Consensus 230 lg~vpa~~~ly~R-l~M~Et~~Y~al~~~~~~~a~---~-----d~~k--------------~~~~~~~~~~~~------ 280 (538)
T KOG0252|consen 230 LGAVPALLVLYFR-LKMPETARYTALVSKKLKQAA---G-----DMKK--------------VLSVDIEAESTA------ 280 (538)
T ss_pred HHHHHHHHHHHhh-hcCCcchhHHHHhhcCHhhhh---h-----cccc--------------ccccccchhhcc------
Confidence 9999887776644 468998754411110 00000 0 0000 000000000000
Q ss_pred ccccCCCCCCCccch---HHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHH
Q 013336 202 AEDTNGSFNDGPGAV---LVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQG 278 (445)
Q Consensus 202 ~~~~~~~~~~~~~~~---~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~g 278 (445)
++....++.+ +...+..+ + -+.+...|..-|+-=+++++...|..+-+.. .+-.|.+++. +..|+
T Consensus 281 -----~~~~~~~~~~~~~F~~~f~~~-h-g~~Llgt~~~WFllDiafy~~nL~~s~I~~~--ig~~~~~~~~-~~~~~-- 348 (538)
T KOG0252|consen 281 -----ESDVPPPSNSFGLFSRLFLRW-H-GKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA--IGVIPSANTY-HELFK-- 348 (538)
T ss_pred -----ccCCCCcccccchHHHHHHHH-H-HHHHHHHHHHHHhhhhhhhccccHHHHHHHh--hccCCCcchH-HHHHH--
Confidence 0011111122 22222221 1 1333344554555555677777777664432 1223333222 23332
Q ss_pred hhHHHHHHHHHHHHHHH-HhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccC-Ccceeeecccccc-c--
Q 013336 279 VREGAFGLLLNSVVLGV-SSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYS-GGIEHGIGANQAI-K-- 353 (445)
Q Consensus 279 v~~g~~~l~~~~i~~~i-~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Gi-~-- 353 (445)
.+-+.+++ ++.+.+ .-.+...++|++|||++-+.|..++++.++.+++.. |... ..-.+++-.+..+ +
T Consensus 349 --vA~~~~ii-a~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y----~~~~~~~Gf~v~y~l~~ff~NF 421 (538)
T KOG0252|consen 349 --VAEGNLII-AVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPY----NQLENTIGFVVLYSLTFFFGNF 421 (538)
T ss_pred --HHHHHHHH-HHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCc----ccccccCceeehHHHHHHHHhc
Confidence 22223322 222222 234556789999999999999999998777665544 3110 0011111111111 1
Q ss_pred eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccc-----cccCcchhHHHHHHHHHHHHHHhhhee
Q 013336 354 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA-----LFGGGNIPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 354 ~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~-----~~g~~~~~~f~~~~v~~ll~~~~~~~~ 428 (445)
-=+..-+.+-+|.+|.. -||+..||.-.+--.+-+++...+.++.+ ..|. ..+|++.+.+++++.+ ..++
T Consensus 422 GPn~ttfivpaE~FPar--vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~--~~v~~i~~~~~~~gi~-~T~l 496 (538)
T KOG0252|consen 422 GPNATTFIVPAEIFPAR--VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGV--RNVFIILAGCMLLGIL-FTLL 496 (538)
T ss_pred CCCceeEEeehhhchHH--HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccc--hHHHHHHHHHHHHhHh-eeEE
Confidence 00111133447888875 67999999999999999999999999887 4553 3578888888887766 4578
Q ss_pred ccCCCCCCcc
Q 013336 429 LPHLSSNSFR 438 (445)
Q Consensus 429 vpe~~~~~~~ 438 (445)
+||||||+..
T Consensus 497 ~pEtk~~~le 506 (538)
T KOG0252|consen 497 IPETKGKSLE 506 (538)
T ss_pred eecccccCHH
Confidence 8999999864
No 100
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.90 E-value=8.4e-09 Score=108.36 Aligned_cols=169 Identities=8% Similarity=0.016 Sum_probs=121.1
Q ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhh
Q 013336 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (445)
Q Consensus 226 ~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~ 305 (445)
+.||.++.++.+.++.-++++.+..+...|+.+. ++-+. . ...+....+.....+...+.|++.|
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~-lg~~~----------~----~a~~i~~~~~~~~~~~~~~~G~laD 75 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQ-LGFSQ----------E----QAFITFGAFAALVYGLISIGGYVGD 75 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH----------H----HHHHHHHHHHHHHHHHHhhHHHhhh
Confidence 4589999999999998899998888888888653 33221 1 1123333455555566678999999
Q ss_pred h-cCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHH
Q 013336 306 W-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLN 382 (445)
Q Consensus 306 r-~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n 382 (445)
| +||||++.+|.++++++.+.+++.. +... ...+...+.|++ ...+.+.+++++.+|+++++++..++++.
T Consensus 76 r~~G~r~~~~~g~~~~~~g~~~~~~~~----~~~~--ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~ 149 (489)
T PRK10207 76 HLLGTKRTIVLGAIVLAIGYFMTGMSL----LKPD--LIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFY 149 (489)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHhc----cchh--HHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHH
Confidence 9 9999999999999999877666543 2110 111123344554 55566679999999887555677899999
Q ss_pred HHHHHHHHHhhhccccccccccCcchhHHHHHHHH
Q 013336 383 LAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLS 417 (445)
Q Consensus 383 ~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~ 417 (445)
..+.++.++++.++|.+.+..|- .+.|++.++.
T Consensus 150 ~~~nig~~~g~~l~g~l~~~~gw--~~~F~i~~i~ 182 (489)
T PRK10207 150 MSINIGSLISLSLAPVIADKFGY--SVTYNLCGAG 182 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCh--HHHHHHHHHH
Confidence 99999999999999999888763 4577776543
No 101
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.87 E-value=4.1e-08 Score=100.88 Aligned_cols=266 Identities=12% Similarity=0.053 Sum_probs=142.8
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhc----c---cchhh-----hcc
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPF----L---TSRAC-----CAA 113 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~----~---~~~~~-----~~~ 113 (445)
+..++....+++..+++.+..|+++|++..++.+...++|..+|+.++... .....+. . .+... ...
T Consensus 103 l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (410)
T TIGR00885 103 ILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL-ILSNLPHQSQDVLDKLSPEELSAIKHSD 181 (410)
T ss_pred HHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCccchhhhhhhcCHHHHHHHHHHH
Confidence 445556677788889999999999999999999999999999999988752 0000000 0 00000 000
Q ss_pred ccchhHHHHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccch
Q 013336 114 CGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDA 193 (445)
Q Consensus 114 ~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (445)
..++|++|++.+++.++..++.. ..|+++... ++++ +
T Consensus 182 ~~~w~~~fl~~a~~~~~~~~~~~-~~~~p~~~~-~~~~--~--------------------------------------- 218 (410)
T TIGR00885 182 LASVQTPYMIIGAVVLAVALLIM-LTKMPALNH-SDAK--Q--------------------------------------- 218 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCc-cccc--c---------------------------------------
Confidence 12588999777665444333221 222211100 0000 0
Q ss_pred hhhhccccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhH
Q 013336 194 NLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVK 273 (445)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~ 273 (445)
+ .....++++++ .+.++..++..|+-..+-.....|.+.|..+...+.+
T Consensus 219 -------------~----~~~~~~~~~~~-----~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~--------- 267 (410)
T TIGR00885 219 -------------I----SFSASLSRLAR-----IRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMT--------- 267 (410)
T ss_pred -------------c----cchhhHHHHHh-----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC---------
Confidence 0 00112222222 1334445666666444444666777777644211110
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc
Q 013336 274 FYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK 353 (445)
Q Consensus 274 ~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~ 353 (445)
++. +..-+..+-....+.-++.+++.||+++|+++.+..++.+++++...+.. + . .....+.+.|+.
T Consensus 268 ---~~~--a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~----~-~---~~~~~l~~~glf 334 (410)
T TIGR00885 268 ---AGF--AANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG----G-H---VGLYCLTLCSAF 334 (410)
T ss_pred ---HHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC----C-h---HHHHHHHHHHHH
Confidence 110 00011111223345567778999999999998887777766655444332 2 1 122233344433
Q ss_pred --eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccc
Q 013336 354 --ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF 403 (445)
Q Consensus 354 --~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~ 403 (445)
...+.-|++..+..+++. +.+ -+.+.++ .++-.+.|.+.|.+.|..
T Consensus 335 ~s~~fp~i~sl~~~~~g~~~-~~~--s~~l~~~-~~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 335 MSLMFPTIYGIALKGLGQDT-KYG--AAGLVMA-IIGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHHHHHHHHHHHhhhhhhh-hhh--HHHHHHH-HhccchHHHHHHHHHHHh
Confidence 334555777777777642 222 2333333 388888999999998854
No 102
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.86 E-value=3.8e-09 Score=105.52 Aligned_cols=276 Identities=13% Similarity=0.021 Sum_probs=174.4
Q ss_pred cchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHh
Q 013336 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (445)
Q Consensus 54 ~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~ 133 (445)
..+...++++...|||+||.|++++. +.++|..+...++=. ....+++ ..++.+..+..+.+++..+
T Consensus 121 sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~--v~~~~g~----------~~w~~~~~i~~~~l~v~~v 187 (417)
T COG2223 121 SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL--VAVAFGF----------LAWRNVAGIYVVALAIAAV 187 (417)
T ss_pred eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH--HHHHHhh----------HHHHHHHHHHHHHHHHHHH
Confidence 44677888999999999999999998 888887775544321 1111110 0266777777777777777
Q ss_pred heeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCCc
Q 013336 134 VTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGP 213 (445)
Q Consensus 134 ~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (445)
...+..+|.|..+...++. .
T Consensus 188 ~~~~~~~d~p~~r~~~~~~------------------------------------------------------------~ 207 (417)
T COG2223 188 LAWLGMNDVPEHRASVKPQ------------------------------------------------------------L 207 (417)
T ss_pred HHHHHhCCChhhhcccccc------------------------------------------------------------c
Confidence 7777777766421111100 0
Q ss_pred cchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHH
Q 013336 214 GAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVL 293 (445)
Q Consensus 214 ~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~ 293 (445)
...++.+++ -+..+.+++..+...=++..+..|++.|..+ .|+-++. ..| .++ ..+...+
T Consensus 208 ~~~~~~v~~-----~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~-~fg~~~~---------~Ag----~~a-~~f~~~g 267 (417)
T COG2223 208 PAQLKAVFS-----NKDTWLLSLLYFATFGGFVGFSAYLPMYLVT-QFGLSPV---------TAG----LIA-FLFPLIG 267 (417)
T ss_pred hhHHHHHhc-----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChh---------hHH----HHH-HHHHHHH
Confidence 011222221 2456778877777766777888888888776 6776642 112 122 2345566
Q ss_pred HHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceee----eccccccceecchhHHHhhhhhcc
Q 013336 294 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHG----IGANQAIKITYSVPFAITAELTAD 369 (445)
Q Consensus 294 ~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Gi~~~~svP~aLls~~~~~ 369 (445)
.+.-.+.|+++||+|.+|+.......++++.....+......+......... +..+.|++ +---|.++..+.|+
T Consensus 268 ~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~G--nGsvfk~Ip~if~~ 345 (417)
T COG2223 268 ALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLG--NGSVFKMIPVIFPK 345 (417)
T ss_pred HHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccC--cchheeechHHHHh
Confidence 6777889999999999999888888888776554443211100010000011 11123333 44446777788876
Q ss_pred CCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhee
Q 013336 370 SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 370 ~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~ 428 (445)
+ .|...|+....-.++-+..|...|...+..|.. ...|++...+.+++.+..+..
T Consensus 346 ~---~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~-~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 346 E---TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSY-TGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred h---hhHHHHHHHHhccccccchhHHHHHHHHhcccH-HHHHHHHHHHHHHHHHHHHHH
Confidence 4 688889999888888888888888888888843 456888888777777766543
No 103
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.85 E-value=2.2e-08 Score=104.85 Aligned_cols=136 Identities=18% Similarity=0.042 Sum_probs=79.3
Q ss_pred HHHHHHHHHhhhhh----hhhhh-cCchhhH--HHHHHHHHHHHHHHHHhhhccccc--cCCcceeeeccccccc--eec
Q 013336 288 LNSVVLGVSSFLIE----PMCRW-IGSRLVW--AISNFIVFACMATTAIISVISVRE--YSGGIEHGIGANQAIK--ITY 356 (445)
Q Consensus 288 ~~~i~~~i~s~i~~----~l~~r-~g~r~l~--~~g~~~~ai~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Gi~--~~~ 356 (445)
++++..++...+.. ++.|| .+.+... .+|.++.+++++.+++......+. .+.+..+....+.+++ ...
T Consensus 320 ~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~ 399 (475)
T TIGR00924 320 LNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMIS 399 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 45555555544433 44444 2333333 678888888887666532111000 0001112223345555 555
Q ss_pred chhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhe
Q 013336 357 SVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 427 (445)
Q Consensus 357 svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~ 427 (445)
+.-+++++++.|++ .+|+++|++++...+++.+++.+.+...+..|. ...|...+++.++.++...+
T Consensus 400 p~~~~~~~~~aP~~--~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 400 PLGLSWWTKIAPQR--LMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGV--TGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHH
Confidence 66689999999986 689999999999999999998887765544332 23455555555544444433
No 104
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.82 E-value=1.1e-08 Score=101.21 Aligned_cols=170 Identities=16% Similarity=0.111 Sum_probs=116.0
Q ss_pred HHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHH
Q 013336 235 LIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWA 314 (445)
Q Consensus 235 ~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~ 314 (445)
++..|+..++...+....+.++.+ -++.++. ..| +....+.+...+.+++.+++.||+|||+++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~-------------~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~ 66 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAE-ELGLSPS-------------QIG-LLFSAFFLGSALFSPFAGYLSDRFGRRRVLI 66 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHC-CSTTTSH-------------CHH-HHHHHHHHHHHHHHHHHHHHHHHS-HHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH-ccCCCHH-------------HHH-HHHHHHHHHHHHHHHHHHHHHHHcCCeeeEe
Confidence 455666666665555555534443 2443321 122 3444567778888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHh
Q 013336 315 ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIV 392 (445)
Q Consensus 315 ~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~ 392 (445)
++.++.+++.+...+.. +.+ ...+...+.|++ .......+++.+..|++ ++++.+|+.+....++.+++
T Consensus 67 ~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~g~~~g 137 (352)
T PF07690_consen 67 IGLLLFALGSLLLAFAS----NFW---LLLIARFLLGIGSGFFSPASNALIADWFPPE--ERGRAFGILSAGFSLGSILG 137 (352)
T ss_dssp HHHHHHHHHHHHHHHHC----CHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC--CHHHHHHHHHHHHHHHHHHH
T ss_pred ehhhhhhhHHHHhhhhh----hHH---HHhhhccccccccccccccccccccccchhh--hhhhccccccchhhhhhhcc
Confidence 99999988844333322 322 122234456665 45566678899999985 68999999999999999999
Q ss_pred hhccccccccccCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 393 SLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 393 ~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
+.+++.+.+..|- .+.|++.+++.++++++...+.|
T Consensus 138 ~~l~~~l~~~~~~--~~~~~~~~~~~~~~~il~~~~~~ 173 (352)
T PF07690_consen 138 PLLGGFLISYFGW--RWAFLISAILSLIAAILFILFLP 173 (352)
T ss_dssp HHHHHHCCCHCHH--CCHHHHHHHHHHHHHHHHHCCC-
T ss_pred cchhhhhhhcccc--ccccccccchhhhhhhhHhhhhh
Confidence 9999988877663 35788888888888776444444
No 105
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.82 E-value=1e-08 Score=104.68 Aligned_cols=175 Identities=11% Similarity=0.033 Sum_probs=117.1
Q ss_pred CCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 013336 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (445)
Q Consensus 227 ~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r 306 (445)
|+|.++.+++.+++..++-..+......++.+ ++.++ ....+....+.+...+.+.+.|++.||
T Consensus 1 ~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~--------------~~~~~~~~~~~l~~~l~~~~~G~laDr 64 (393)
T PRK11195 1 MSKGFYAIMAAQFFSALADNALLFAAIALLKE--LHYPD--------------WSQPLLQMFFVLAYIVLAPFVGAFADS 64 (393)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcH--------------HHHHHHHHHHHHHHHHHHhhhhHhhhc
Confidence 45677888888888877644443333333322 22221 111244456777788889999999999
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHH
Q 013336 307 IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLA 384 (445)
Q Consensus 307 ~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~ 384 (445)
+|||+++.++.++++++.+...+.. +. .+...+.|++ ...+...+++.+++|++ ++++.+|+.+..
T Consensus 65 ~grr~vl~~~~~~~~~~~~~~~~~~----~~------~~~r~l~G~~~a~~~pa~~a~i~~~~~~~--~~~~a~~~~~~~ 132 (393)
T PRK11195 65 FPKGRVMFIANGIKLLGCLLMLFGI----HP------LLAYGLVGIGAAAYSPAKYGILTELLPGE--KLVKANGWMEGS 132 (393)
T ss_pred cCCchhhHHHHHHHHHHHHHHHHHH----HH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHH
Confidence 9999999999999887665443332 21 1222345665 55667789999999986 689999999999
Q ss_pred HHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 385 IVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 385 ~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
..++++++|.++|.+.+.. ....+.+.++..+++. +..+.+||.+
T Consensus 133 ~~~~~~~Gp~lgG~l~~~~---~~~~~~i~~~~~~~~~-~~~~~l~~~~ 177 (393)
T PRK11195 133 TIAAILLGTVLGGALADPH---AEAALAVCALIYLLAA-LFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 9999999999999887753 1233444444444443 3446777754
No 106
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.82 E-value=4.7e-08 Score=102.75 Aligned_cols=108 Identities=17% Similarity=0.153 Sum_probs=70.4
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhh-------HHHHHHHHHHHHHHHHHhhh-cc-ccc-cCCcceeeeccccccc--ee
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLV-------WAISNFIVFACMATTAIISV-IS-VRE-YSGGIEHGIGANQAIK--IT 355 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l-------~~~g~~~~ai~~~~~~~~~~-~~-~~~-~~~~~~~~~~~~~Gi~--~~ 355 (445)
++.+...+.+.+.+++.||+++|+. ..+|.++.+++++.+++... .. .+. .+.+.......+.|++ ..
T Consensus 317 ~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~ 396 (489)
T PRK10207 317 LNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFI 396 (489)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 4455666777788899999999874 67788888877654432211 11 011 1101111123345666 34
Q ss_pred cchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccc
Q 013336 356 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAG 397 (445)
Q Consensus 356 ~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g 397 (445)
...-++++.+..|++ .+|..+|+.++...+++.++..+..
T Consensus 397 ~~~g~~~~~~~aP~~--~~g~~~g~~~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 397 SALGLAMIAALVPQH--LMGFILGMWFLTQAAAFLLGGYVAT 436 (489)
T ss_pred hHHHHHHHHHhChHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444488888888886 6899999999999999999887664
No 107
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.82 E-value=1.9e-08 Score=105.31 Aligned_cols=175 Identities=11% Similarity=0.038 Sum_probs=124.4
Q ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhcccccccee-eecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 013336 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGRE-VYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMC 304 (445)
Q Consensus 226 ~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~-if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~ 304 (445)
+.|+.++.++.+.++..++++.+..+.+.|+.+. -++-++ -+ .| +.+..+++...+.+++.+++.
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~---------~~----ag-~~~~~~~~~~~~~~~~~G~la 72 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQ---------EQ----AF-IIFGAYSALVYLLTSVGWWFG 72 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCH---------HH----HH-HHHHHHHHHHHHHHhhHHHHH
Confidence 4699999999999998899888888888887542 022221 01 22 334466777888899999999
Q ss_pred hh-cCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCC-CCcccchhH
Q 013336 305 RW-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSG-GGQGLAIGV 380 (445)
Q Consensus 305 ~r-~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~-~~~G~~~gi 380 (445)
|| +|||++..++.++.+++++.+++.. +.+ ...+...+.|++ ...+...+++++.+|+++ ++++..+++
T Consensus 73 Dr~~G~~~~l~~~~~~~~~g~~~~~~~~----~~~---~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~ 145 (475)
T TIGR00924 73 DRVWGTKKTMVLGGIVLMLGHFMLAMSI----YPD---LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTL 145 (475)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHhcc----cHh---HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehh
Confidence 99 8999999999999988877665542 211 111223334544 444555688999998653 347778999
Q ss_pred HHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHH
Q 013336 381 LNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 423 (445)
Q Consensus 381 ~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~ 423 (445)
++....++.++++.+.+.+.+..|. ...|.+.++..+++.+
T Consensus 146 ~~~~~niG~~ig~~l~g~l~~~~g~--~~~f~~~~~~~~~~~l 186 (475)
T TIGR00924 146 FYMSINIGSFISPLLAGVIAENYGY--HVGFNLAAVGMVIGLL 186 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHH
Confidence 9999999999999999988877664 3567777765555443
No 108
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.82 E-value=1.4e-08 Score=102.88 Aligned_cols=180 Identities=7% Similarity=-0.055 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 013336 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (445)
Q Consensus 227 ~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r 306 (445)
|++.+..++...+....+-.......+.+..+ ++-++ .+ . .+....+.+...+.+.+.+++.||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~s~---------~~----~-g~~~s~~~~~~~~~~~~~g~l~dr 64 (382)
T PRK10091 1 MKKVILSLALGTFGLGMAEFGIMGVLTELAHD--VGISI---------PA----A-GHMISYYALGVVVGAPIIALFSSR 64 (382)
T ss_pred CcchHHHHHHHHHHHHhhHHHHHhChHHHHHH--cCCCH---------HH----H-hHHHHHHHHHHHHHHHHHHHHHcc
Confidence 56777778888888777766666666654433 33221 01 1 234445677778889999999999
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHH
Q 013336 307 IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLA 384 (445)
Q Consensus 307 ~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~ 384 (445)
+|||+++.++.++.+++.+..++.. +.+ ...+...+.|++ .......+++.+..|++ ++++.+|+....
T Consensus 65 ~g~r~~~~~~~~~~~~~~~l~~~~~----~~~---~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 135 (382)
T PRK10091 65 YSLKHILLFLVALCVIGNAMFTLSS----SYL---MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG--KVTAAVAGMVSG 135 (382)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhC----cHH---HHHHHHHHHHhhhHHHHHHHHHHHHHhCChH--HhhHHHHHHHHH
Confidence 9999999999999988877666553 322 122234456655 33344456778888764 578889999999
Q ss_pred HHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 385 IVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 385 ~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
..+++.+++.+++.+.+..|- .++|.+.++++++..+...+.+||.+
T Consensus 136 ~~~g~~~g~~l~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 136 MTVANLLGIPLGTYLSQEFSW--RYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHhccHHHHHhhhccH--HHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999998888877776653 46788888877777666666788754
No 109
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.81 E-value=1.8e-08 Score=106.25 Aligned_cols=183 Identities=12% Similarity=0.031 Sum_probs=121.5
Q ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhh
Q 013336 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (445)
Q Consensus 226 ~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~ 305 (445)
+.|+.+..++...++..++++.+..+.+.|+.+ .++-++. +. .+....+.........+.+++.|
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~-~lg~s~~---------~a-----~~~~~~~~~~~~~~~~~~G~LaD 82 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVK-QLGMSEA---------DS-----ITLFSSFSALVYGLVAIGGWLGD 82 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHH---------HH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 468889999999999999999988888888865 3443310 11 11122223333344567899999
Q ss_pred h-cCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHH
Q 013336 306 W-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLN 382 (445)
Q Consensus 306 r-~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n 382 (445)
| +|||+++.++.++++++...+++.. +.+. ...+...+.|++ ...+.+.+++++.+|+++++++..+++++
T Consensus 83 r~~G~r~~~~~g~~~~~ig~~l~~~~~----~~~~--~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~ 156 (500)
T PRK09584 83 KVLGTKRVIMLGAIVLAIGYALVAWSG----HDAG--IVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYY 156 (500)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHhc----ccHH--HHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHH
Confidence 9 5999999999999988876655432 1110 111112334444 44556668899999875445556789999
Q ss_pred HHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHH---HHHhhheeccC
Q 013336 383 LAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALA---GGVVATLKLPH 431 (445)
Q Consensus 383 ~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll---~~~~~~~~vpe 431 (445)
....++.++++.+.|.+.+..|. .+.|.+.++..++ ..++....+||
T Consensus 157 ~~~~iG~~~gp~i~g~l~~~~g~--~~~F~i~~i~~~i~~i~~~~~~~~~~~ 206 (500)
T PRK09584 157 MSINIGSFFSMLATPWLAAKYGW--SVAFALSVVGMLITVVNFAFCQRWVKQ 206 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHhHHHhcc
Confidence 99999999999999999887764 4567777754444 33334444554
No 110
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.80 E-value=6.9e-09 Score=106.62 Aligned_cols=140 Identities=14% Similarity=0.086 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+.+.++.+...+..++.++++||+|||+++..+.++++++.+...+.. +.+ ..++...+.|++ ....+.++
T Consensus 55 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~----~~~---~l~~~r~l~Gi~~~~~~~~~~~ 127 (413)
T PRK15403 55 ASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT----SMT---QFLIARFIQGTSICFIATVGYV 127 (413)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC----CHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 344456667777888899999999999999999988888776655543 221 122233446655 23344567
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 434 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~ 434 (445)
++.+..|++ ++++.+++.+....++..+++.+++.+.+..|- .+.|++.++..+++.++..+.+||++.
T Consensus 128 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw--~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 128 TVQEAFGQT--KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW--KVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 788888875 568889999999999999999988887776553 357888888888877766667888754
No 111
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.74 E-value=3.7e-08 Score=99.02 Aligned_cols=141 Identities=15% Similarity=0.112 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+.+...+..++.+++.||+|||+.+..+.++.+++.+...+.. +.+ ...+...+.|++ .....-.+
T Consensus 44 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~g~~~~~~~~~~~~ 116 (385)
T TIGR00710 44 MTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN----NIE---TLLVLRFVQAFGASAGSVISQA 116 (385)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc----cHH---HHHHHHHHHHcchhHHHHHHHH
Confidence 334456667778889999999999999999999888888776655543 221 122223345555 33445568
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSN 435 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~ 435 (445)
++.|+.|++ ++|+.+|+.+....+++++++.+.+.+.+..|. ...|++.+++.++..++..+..||++.+
T Consensus 117 ~~~~~~~~~--~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 117 LVRDIYPGE--ELSRIYSILMPVLALAPAVAPLLGGYILVWLSW--HAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHhcCcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 889999875 679999999999999999999999988776653 3467777777777777666677876544
No 112
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.73 E-value=1.4e-08 Score=100.94 Aligned_cols=178 Identities=10% Similarity=-0.001 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhh
Q 013336 233 VVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLV 312 (445)
Q Consensus 233 ~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l 312 (445)
.++..+++..++........+.|+.+ ++.++ . ..| +....+.+...+.+.+.|++.||+|||++
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~----------~---~~g-~~~~~~~~~~~i~~~~~G~l~dr~g~r~~ 66 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA--GTGSA----------S---VLS-LAALAGMLPYVVLSPIAGALADRYDRKKV 66 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH--hhccH----------H---HHH-HHHHHHHHHHHHHHHhhhHHHHhhchhHH
Confidence 35566777777666655556655543 22221 0 122 34446677788889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHH
Q 013336 313 WAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQM 390 (445)
Q Consensus 313 ~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qi 390 (445)
+..+.++.+++.+...+........++ ...+...+.|++ ...+.-.+++.|..|++ ++|+.+|+.+....++.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~ 142 (365)
T TIGR00900 67 MIGADLIRAVLVAVLPFVALLGGLNIW--QVYVLAGILAIAQAFFTPAYQAMLPDLVPEE--QLTQANSLSQAVRSLFYI 142 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH--HHHHHHhHHHHHHHHHHH
Confidence 999988887776655554321100111 122223345555 33444568899999876 679999999999999999
Q ss_pred HhhhccccccccccCcchhHHHHHHHHHHHHHHhhhe-eccCC
Q 013336 391 IVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL-KLPHL 432 (445)
Q Consensus 391 i~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~-~vpe~ 432 (445)
+++.+++.+.+..|- ...|++.++..+++.++... ..||.
T Consensus 143 ~g~~l~~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (365)
T TIGR00900 143 VGPGIGGLMYATLGI--KWAIWVDAVGFAISALLIVSVRIPEL 183 (365)
T ss_pred HHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHhcccccC
Confidence 999999988877663 34677777766666554443 33443
No 113
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.73 E-value=3.6e-08 Score=97.70 Aligned_cols=262 Identities=16% Similarity=0.149 Sum_probs=156.7
Q ss_pred ccchhhHHHHhcCCCccc-hhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHH
Q 013336 53 TVQGPARALLADLSGPDQ-RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 131 (445)
Q Consensus 53 ~~~~p~~A~i~D~~p~~q-r~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~ 131 (445)
...+.-.|.++|..|+|. |++++|+.-.+.++|-++||..|++ +.+.. ..+.+|++.++++++.
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGi--lYe~~-------------Gk~aPFlVL~~v~Lld 239 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGI--LYEFA-------------GKSAPFLVLAIVLLLD 239 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccc--hHhhc-------------CCcCcHHHHHHHHHHH
Confidence 456778899999999855 7999999999999999999999999 44443 4678999999988888
Q ss_pred HhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCC
Q 013336 132 ALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFND 211 (445)
Q Consensus 132 ~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (445)
..+-++.++.+...+ +.+
T Consensus 240 ~~L~l~vi~p~~~~~-~~~------------------------------------------------------------- 257 (464)
T KOG3764|consen 240 GALQLLVIEPTEMDP-DST------------------------------------------------------------- 257 (464)
T ss_pred HHHHHheeCccccCc-ccc-------------------------------------------------------------
Confidence 877766554321110 000
Q ss_pred CccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhh---hhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHH
Q 013336 212 GPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFP---FFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 288 (445)
Q Consensus 212 ~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~---~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~ 288 (445)
.+...+++++++ |.. .+..+--|++..+ ...-.+.|+-|..+ .|+ .+.|+ ..+-
T Consensus 258 ~~~~~~~~Ll~d----P~I----~~~agai~~~n~~lafLePtlslwm~e~m~--~p~--------w~~G~-----~fLp 314 (464)
T KOG3764|consen 258 EQGTPMWSLLMD----PYI----LLIAGAITFSNSSLAFLEPTLSLWMLETMF--TPG--------WEVGL-----AFLP 314 (464)
T ss_pred ccCccHHHHHhC----chH----hhhhcchhhccchHHHhCcccHHHHHHhcc--CCC--------cceee-----eecc
Confidence 011234444432 432 2222222332222 23334556665443 221 12232 1223
Q ss_pred HHHHHHHHhhhhhhhhhhcC--chhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccc----cce--ecchh-
Q 013336 289 NSVVLGVSSFLIEPMCRWIG--SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQA----IKI--TYSVP- 359 (445)
Q Consensus 289 ~~i~~~i~s~i~~~l~~r~g--~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~G----i~~--~~svP- 359 (445)
.++..++..-+-+.+.||++ |...-..|.+..+++.....+.+. + .-.|.+..| ++. +.-+|
T Consensus 315 ~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~-----~----~~L~vp~~~l~~~i~~~dasl~P~ 385 (464)
T KOG3764|consen 315 ASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATS-----I----AQLWVPNFGLGFGIGLADASLIPT 385 (464)
T ss_pred cccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhh-----H----HHHhhhhHHHHHHHHHHHHHHhhh
Confidence 45566677888899999998 433333466666555444444432 2 112333222 221 11122
Q ss_pred -HHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 360 -FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 360 -~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
.-++-..|.++-+-.|...+|...+.+++-.++|.++|.+++..|.+ |...+-++..++-+...
T Consensus 386 l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~--wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 386 LGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFE--WLMTIIGILNLIYAPVL 450 (464)
T ss_pred hHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHH--HHHHHHHHHHHHHHHHH
Confidence 22333333332235799999999999999999999999999999865 55556666666644433
No 114
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.73 E-value=2e-08 Score=85.12 Aligned_cols=133 Identities=18% Similarity=0.188 Sum_probs=97.6
Q ss_pred HHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhh
Q 013336 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAEL 366 (445)
Q Consensus 289 ~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~ 366 (445)
+++...+.+.+.+++.||+|||+.+..+....+++.+...+.. +.+ ...+...+.|+. ......++++.|.
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS----NIT---VLIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3455667788899999999999999998888887766554432 221 122223345544 3445567888999
Q ss_pred hccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 367 TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
.|++ .+|+.+|+.++...+++.+++.+.+.+.+..+. ...+.+.++..+++.++..+..||+
T Consensus 80 ~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 80 YPPE--ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGW--RAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred CChh--hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccch--HHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9875 578999999999999999999999988776553 3567788888888877777777774
No 115
>PRK03545 putative arabinose transporter; Provisional
Probab=98.71 E-value=4.5e-08 Score=99.40 Aligned_cols=137 Identities=13% Similarity=0.073 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHh
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAIT 363 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLl 363 (445)
...+.+...+.+.+.+++.||+|||+++..+.++++++.+.+.+.. +.+ ...+...+.|++ ...+...+++
T Consensus 50 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~r~~~G~~~~~~~~~~~~~i 122 (390)
T PRK03545 50 LTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW----NFT---VLLISRIGIAFAHAIFWSITASLA 122 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3355666677788889999999999999999999888877666554 322 122223345544 3344556888
Q ss_pred hhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 364 AELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 364 s~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
.+..|++ ++|+.+|+.+....+++.+++.+.+.+.+..|- .+.|++.++++++..++....+||.+
T Consensus 123 ~~~~~~~--~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 123 IRVAPAG--KKAQALSLLATGTALAMVLGLPLGRVIGQYLGW--RTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHhCChh--hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcH--HHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999876 579999999999999999999998888776663 45788888887777776666667643
No 116
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.70 E-value=3.4e-08 Score=102.85 Aligned_cols=140 Identities=14% Similarity=0.088 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+.+...+...+.+++.||+|||+++.++.++++++.+...+.. +.+ ...+...+.|++ ...+.-++
T Consensus 41 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~~~G~~~~~~~~~~~~ 113 (485)
T TIGR00711 41 WVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAP----NLE---LMIIFRVIQGFGGGPLIPLSFS 113 (485)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcC----CHH---HHHHHHHHHHhhhhhHHHHHHH
Confidence 444567778888899999999999999999999999888776655443 211 122223445655 34455578
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 434 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~ 434 (445)
++.+..|++ ++|+.+|+.++...+++++++.+++.+.+..|- .+.|++.+.+++++.++..+.+||++.
T Consensus 114 ~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w--~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 114 TLLNIYPPE--KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHW--RWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHCCHH--HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCc--eehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 899999875 579999999999999999999999988877664 357788777777777767667776544
No 117
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.70 E-value=5.6e-07 Score=93.39 Aligned_cols=260 Identities=15% Similarity=0.123 Sum_probs=157.8
Q ss_pred ccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHH
Q 013336 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (445)
Q Consensus 53 ~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~ 132 (445)
++.+..-||++|++..+.|....++.+...+.|..+|+.+|+. +.+.. +...+|.++++..++..
T Consensus 128 ~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~--~~~~~-------------~~a~~f~ia~~~~~~~~ 192 (463)
T KOG2816|consen 128 AIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGY--LVKFL-------------GIALVFLIAAASGILSL 192 (463)
T ss_pred hhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHH--HHHhc-------------CchHHHHHHHHHHHHHH
Confidence 4667789999999999999999999999999999999999987 44432 56788999999999999
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccccccccCCCCCCC
Q 013336 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (445)
Q Consensus 133 ~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (445)
+...+++||+...+++++ +..+.+.. .+ .
T Consensus 193 ~y~~~~l~Esl~~~~~~~---~~~~~~~~----------------------------------------~~--------~ 221 (463)
T KOG2816|consen 193 LYMLLFLPESLQEKERSD---ATLRELTP----------------------------------------GS--------L 221 (463)
T ss_pred HHHhhccccccCcccccc---ccccccCC----------------------------------------Cc--------c
Confidence 999999999753332221 00000000 00 0
Q ss_pred ccchHHHHHHHhcc--CCHHHHHHHHHHHH-HHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHH
Q 013336 213 PGAVLVNLLTSLRH--LPPAMHVVLIVMAL-TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 289 (445)
Q Consensus 213 ~~~~~~~~~~~~~~--~P~~l~~l~l~~f~-~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~ 289 (445)
......+.+++..+ --|....+|++.++ .+.-+....-..+.|.. .-|+.|++ . .+.+. ...
T Consensus 222 ~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~-~~f~w~~~-------~------~s~~~-~~~ 286 (463)
T KOG2816|consen 222 DSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLK-AKFGWNKK-------E------FSDLL-SLV 286 (463)
T ss_pred cchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEe-eecCcCHH-------H------HHHHH-HHH
Confidence 00001111111111 01223334444333 33333333312222222 24555521 1 11112 223
Q ss_pred HHHHHHH-hhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccceecchhHHHhhhhhc
Q 013336 290 SVVLGVS-SFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKITYSVPFAITAELTA 368 (445)
Q Consensus 290 ~i~~~i~-s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~svP~aLls~~~~ 368 (445)
++...+. .+..+.+.+.+|.|++..+|.+...+++...++.. +.|..+...+..++.+ .....-.+.++.+.+
T Consensus 287 ~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~----~~w~~~~~~v~~~~~~--~~~pa~~s~~s~~v~ 360 (463)
T KOG2816|consen 287 SILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT----ETWMMFAAGVVVALAG--IVFPAIRAFASILVS 360 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc----cchhhhHHHHHHHhhc--chhHHHHhHHHhhcc
Confidence 4444455 44556888889999988889999988888777775 4442111111111121 333333577788887
Q ss_pred cCCCCcccchhHHHHHHHHHHHHhhhccccccc
Q 013336 369 DSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA 401 (445)
Q Consensus 369 ~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~ 401 (445)
++ ++|+.+++......+..++.|.+.+.+..
T Consensus 361 ~~--e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 361 PE--EQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred cc--cccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 75 68999999999999999999999987643
No 118
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.67 E-value=9.3e-08 Score=100.54 Aligned_cols=175 Identities=17% Similarity=0.095 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
+.+..+++...+..++++...+|+++|..+.-+.. ...+..+.+.+++..+.-++.|.+.|+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~----------------~~aa~l~Siigi~~i~gRi~~G~laD~~~ 361 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSS----------------NDAAFLLSIIGVSDIIGRIILGLLADKPG 361 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh----------------hhhHHHHHHHHHhhhhhhhhhhhhcCccc
Confidence 45666777788888899999999998876422111 11223444567777888889999999988
Q ss_pred chhhHH--HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHH
Q 013336 309 SRLVWA--ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLA 384 (445)
Q Consensus 309 ~r~l~~--~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~ 384 (445)
.++.++ ++.++.+++.+...+.. .+. ..+.++.++|+. .....+.-++.++...+ +....+|+..++
T Consensus 362 ~~~~~~~~~~ll~~gl~~~~~p~~~-----~~~--~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~--~l~~a~Gl~l~~ 432 (509)
T KOG2504|consen 362 IRALVLFLLTLLIAGLARLFLPFAT-----TYV--GLIVFSILFGFCVGSFSSLTPVILVDLVGLE--KLSNAYGLLLLF 432 (509)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhc-----cHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHcChh--hcchHHHHHHHH
Confidence 555544 56666666554444433 221 233345567766 44455555677888775 678889999999
Q ss_pred HHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 385 IVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 385 ~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
..++.++++.+.|.+.|..|.. ...|++.|+..++++++. +++|
T Consensus 433 ~gi~~l~gpPiag~~~d~tg~Y-~~~f~~~g~~~~~s~~~~-~~~~ 476 (509)
T KOG2504|consen 433 QGIGALVGPPIAGLLYDITGNY-DHAFYFCGLCFLLSAVLL-LILR 476 (509)
T ss_pred hHHHHHcCcccceeeeeccCCe-eeehhhcChHHHHHHHHH-HHhH
Confidence 9999999999999999998854 347899999888887654 3444
No 119
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.66 E-value=1.1e-07 Score=99.28 Aligned_cols=174 Identities=12% Similarity=0.076 Sum_probs=118.5
Q ss_pred CCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 013336 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (445)
Q Consensus 227 ~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r 306 (445)
.|+.+..++.+.++..++++.+..+.+.|+.+. ++-++ . .....+..+.+...+..++.|+++||
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~-lgls~----------~----~a~~i~~~~~~~~~l~~ligG~LaDR 71 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQ-LKYDD----------N----HAYELFSAYCSLVYVTPILGGFLADK 71 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCH----------H----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 488888889999998999999888888887652 33221 1 11123445566677788899999999
Q ss_pred c-CchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee--ccccccceecchhHHHhhhhhccCCCCcccchhHHHH
Q 013336 307 I-GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI--GANQAIKITYSVPFAITAELTADSGGGQGLAIGVLNL 383 (445)
Q Consensus 307 ~-g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Gi~~~~svP~aLls~~~~~~~~~~G~~~gi~n~ 383 (445)
+ ||||.+.+|.++++++.+.+.+... +.. ...+. +..+|.+...+...++++|.+|++++.++..+++...
T Consensus 72 ilGrrr~iliG~il~~lg~lll~~~~~---~~~---~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~ 145 (493)
T PRK15462 72 VLGNRMAVMLGALLMAIGHVVLGASEI---HPS---FLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYA 145 (493)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHhhc---chh---HHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHH
Confidence 9 9999999999998887654432210 100 01111 1123433333444688999998764356777899999
Q ss_pred HHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHH
Q 013336 384 AIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 423 (445)
Q Consensus 384 ~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~ 423 (445)
...++-.++|.+.|.+.+..|. ...|.++++..+++.+
T Consensus 146 ~~nlG~~iap~l~g~L~~~~Gw--~~~F~iaaigm~l~li 183 (493)
T PRK15462 146 AGNVGSIIAPIACGYAQEEYSW--AMGFGLAAVGMIAGLV 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhhCh--HHHHHHHHHHHHHHHH
Confidence 9999999999999998877664 3567777665554443
No 120
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.65 E-value=8.7e-08 Score=97.26 Aligned_cols=140 Identities=11% Similarity=0.046 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
....+.+...+...+.+++.||+|||+.+.++.++++++.+...+.. +.+ ...+...+.|++ ......+++
T Consensus 43 ~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~----~~~---~~~~~~~l~g~~~~~~~~~~~~~ 115 (392)
T PRK10473 43 AFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE----TSS---LFLAGRFLQGIGAGCCYVVAFAI 115 (392)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC----cHH---HHHHHHHHHHhhhhHHHHHHHHH
Confidence 33455566667788999999999999999999888888776555432 211 112222345544 334456788
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCC
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSN 435 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~ 435 (445)
+.+..|++ ++++.+|+.+....++.++++.+++.+.+..|. ...|++.++++++..+++.+++||++.+
T Consensus 116 i~~~~~~~--~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 116 LRDTLDDR--RRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPW--QSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh--HHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 89998875 578889999999999999999888777665553 3567787777777777776777876544
No 121
>PRK10504 putative transporter; Provisional
Probab=98.65 E-value=6.6e-08 Score=100.68 Aligned_cols=180 Identities=8% Similarity=-0.018 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCc
Q 013336 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (445)
Q Consensus 230 ~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~ 309 (445)
..+.+++..|+..+....+....+.+..+ ++.++. + .| +....+.+...+...+.+++.||+||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~---------~----~~-~~~~~~~~~~~~~~~~~g~l~d~~g~ 74 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS--LGESPL---------H----MH-MVIVSYVLTVAVMLPASGWLADRVGV 74 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH--hCcCHH---------H----HH-HHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 34555666677666665666666665543 343310 1 12 33345566667778899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHH
Q 013336 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 387 (445)
Q Consensus 310 r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l 387 (445)
|++++.+.++++++.+...+.. +.+ ...+...+.|++ ...+.-.+++.++.|++ .+|+.+|+.+....+
T Consensus 75 r~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 145 (471)
T PRK10504 75 RNIFFTAIVLFTLGSLFCALSG----TLN---ELLLARVLQGVGGAMMVPVGRLTVMKIVPRE--QYMAAMTFVTLPGQV 145 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC----CHH---HHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHH
Confidence 9999998888887776554432 221 122223456655 33344467788888875 578899999999999
Q ss_pred HHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCC
Q 013336 388 PQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNS 436 (445)
Q Consensus 388 ~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~ 436 (445)
+..+++.+.|.+.+..|- .+.|.+...+++++.+.+....|+.+.++
T Consensus 146 g~~~g~~~~g~l~~~~gw--~~~f~~~~~~~~l~~~~~~~~~~~~~~~~ 192 (471)
T PRK10504 146 GPLLGPALGGLLVEYASW--HWIFLINIPVGIIGAIATLMLMPNYTMQT 192 (471)
T ss_pred HHHhhhHHHHHHHhhccH--HHHHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 999999999988887652 45788877777777777766677655443
No 122
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.65 E-value=7.2e-08 Score=98.40 Aligned_cols=137 Identities=15% Similarity=0.057 Sum_probs=101.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+...+.+.+.+++.||+|||++++.+.++++++.+...+.. +.+ ...+...+.|++ ....+..++++
T Consensus 62 ~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~r~l~G~~~g~~~~~~~~~i~ 134 (394)
T PRK10213 62 TVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN----SFS---LLLIGRACLGLALGGFWAMSASLTM 134 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC----hHH---HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 345666777888999999999999999999999998776655543 211 122233456655 34455568889
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCC
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 434 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~ 434 (445)
++.|++ ++|..+|+.+....++.++++.+++.+.+..|- .++|++.++++++..++....+||+++
T Consensus 135 ~~~~~~--~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~l~~~~~l~~~~~~p~~~~ 200 (394)
T PRK10213 135 RLVPPR--TVPKALSVIFGAVSIALVIAAPLGSFLGELIGW--RNVFNAAAVMGVLCIFWIIKSLPSLPG 200 (394)
T ss_pred HHcCHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH--HHHHHHHHHHHHHHHHHHHHHCCCCCc
Confidence 999875 679999999999999999999999988887764 357777777777666655556787543
No 123
>TIGR00895 2A0115 benzoate transport.
Probab=98.64 E-value=1.2e-07 Score=95.34 Aligned_cols=136 Identities=15% Similarity=0.100 Sum_probs=98.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+...+.+++.+++.||+|||+.+..+.++.+++.+...+.. +.+ ...+...+.|++ .......+++.
T Consensus 59 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~~~~~~~ 131 (398)
T TIGR00895 59 SAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALAT----NVT---QLLILRFLAGLGLGGLMPNLNALVS 131 (398)
T ss_pred HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHcc----chH---HHHHHHHHHhcccccchhhHHHHHH
Confidence 345566777889999999999999999999888888776655443 211 122223345554 44555678899
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
|..|++ .+|+.+|+.+....+++++++.+.+.+.+..|.. ..|++.++++++..++..+++||+.
T Consensus 132 ~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 132 EYAPKR--FRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWR--SLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred HHcCHH--hhchhHhhHhhHHHHHHHHHHHHHHHHhhcccce--eehhhhhhHHHHHHHHHHHhCCCCC
Confidence 999875 5789999999999999999999998888776643 4566766666666666666777753
No 124
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.63 E-value=1.2e-07 Score=97.32 Aligned_cols=137 Identities=14% Similarity=-0.049 Sum_probs=100.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+...+.+++.+++.||+|||+++..+.++.+++.+.+++.. +.+ ...+...+.|++ .......++++
T Consensus 50 s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~r~l~G~~~~~~~~~~~~~~~ 122 (412)
T TIGR02332 50 TLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT----GPE---SLYLLRILVGIAEAGFLPGILLYLT 122 (412)
T ss_pred HHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc----CHH---HHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 345566677788899999999999999999999998887766654 322 122233456666 33344456789
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhcccccccc------ccCcchhHHHHHHHHHHHHHHhhheeccCCCC
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL------FGGGNIPAFVLASLSALAGGVVATLKLPHLSS 434 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~------~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~ 434 (445)
|..|++ ++|+.+|+.+....+++++++.+.+.+.+. .| -.++|++.++.+++.+++.++++||++.
T Consensus 123 ~~~~~~--~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~g--wr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 123 FWFPAY--FRARANALFMIAMPVTMALGLILSGYILALDGLMALKG--WQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccc--hhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 999875 579999999999999999999988876532 23 2467888888888777777778888653
No 125
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.63 E-value=2.9e-08 Score=100.23 Aligned_cols=114 Identities=21% Similarity=0.185 Sum_probs=86.3
Q ss_pred hhchhhHHhhhcCCcccccccCCCcceehhhHH--------------------HHHHHHhccccccchhhHHHHhcCCCc
Q 013336 9 IGFSADIGYILGDTKEHCSKFRGTRTRAAFVFV--------------------IGFWLLDLANNTVQGPARALLADLSGP 68 (445)
Q Consensus 9 l~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~~v--------------------~g~~lld~s~n~~~~p~~A~i~D~~p~ 68 (445)
...+.+|...|+|+ .+|+|.+++.+ ++--++.++-....+.++.+|+|..|.
T Consensus 81 ~~i~sPl~gyLadr--------yNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~ 152 (493)
T KOG1330|consen 81 FMIASPLFGYLADR--------YNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPD 152 (493)
T ss_pred HHHHHHHHHHHHhh--------cCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcc
Confidence 34556777778886 44555443222 222334455556667799999999999
Q ss_pred cchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeeccCC
Q 013336 69 DQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPL 144 (445)
Q Consensus 69 ~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~ 144 (445)
+||+++++++.+....|..+||+.|.. ..+.. ..||+.|...+++.+++.++..++++|+++
T Consensus 153 ~~Rs~~~~ify~~ipvGsglG~vvgs~--va~~~------------~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 153 DKRSRVLGIFYFAIPVGSGLGYVVGSV--VASLT------------FWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred hhhhHHHHHhhhhcccccceeEEeeee--eccCc------------cceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 999999999999999999999999986 33321 258999999999999999999999999764
No 126
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.62 E-value=1.8e-07 Score=96.67 Aligned_cols=136 Identities=15% Similarity=0.081 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHh
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAIT 363 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLl 363 (445)
...+.+...+.+++.+++.||+|+|+++.++.++.+++.+.+.+.. +.+ ...+...+.|+. .......+++
T Consensus 64 ~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~l~g~~~g~~~~~~~~~~ 136 (434)
T PRK11663 64 ATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS----SLW---AFALLWVLNAFFQGWGWPVCAKLL 136 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh----HHH---HHHHHHHHHHHHHHccchHHHHHH
Confidence 3456777788899999999999999999999999988877666554 211 111112233443 3334446888
Q ss_pred hhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 364 AELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 364 s~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
.+..|++ ++|+.+|+.++...++.++++.+.+.+.+..|- .+.|.+.++++++.+++..+++||+
T Consensus 137 ~~~~~~~--~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw--~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 137 TAWYSRT--ERGGWWAIWNTAHNVGGALIPLVVGAIALHYGW--RYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHhCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9998875 579999999999999999999999988877663 3567777776666555555555553
No 127
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.62 E-value=8.9e-08 Score=100.77 Aligned_cols=142 Identities=13% Similarity=0.026 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
|....|.+...+...+.+++.||+|||+++.++.++++++.+..++.. +.+ ..++...+.|++ ...+...+
T Consensus 45 ~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~----~~~---~li~~r~l~G~g~~~~~~~~~~ 117 (495)
T PRK14995 45 WIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSP----TAS---WLIATRALLAIGAAMIVPATLA 117 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcC----CHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 555566777777788899999999999999999999998877666553 322 122223456666 33333455
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSN 435 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~ 435 (445)
++.+.++++ +++|+.+|+......++..++|.++|.+.+..|- .+.|++...++++..++..+++||.+++
T Consensus 118 ~l~~~~~~~-~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw--r~~f~i~~~~~~~~~~l~~~~l~~~~~~ 188 (495)
T PRK14995 118 GIRATFTEE-KQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW--GSVFLINVPIVLVVMGLTARYVPRQAGR 188 (495)
T ss_pred HHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh--HHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 666665432 3689999999999999999999999999887663 4678888877777777777778875543
No 128
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.62 E-value=1.5e-07 Score=95.09 Aligned_cols=139 Identities=12% Similarity=0.031 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
....+.+...+.+++.+++.||+|||+++.++.++.+++.+.+.+.. +.+ ...+...+.|++ .......++
T Consensus 52 ~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~l~G~~~~~~~~~~~~~ 124 (405)
T TIGR00891 52 LISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAP----GYI---TMFIARLVIGIGMGGEYGSSAAY 124 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHhhhhhhhHHHHHH
Confidence 33455667778899999999999999999999888888776655543 211 122223445555 444556788
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
+.|..|++ ++|+.+|+.++...++.++++.+.+.+.+..|......|.+.++..++. ++....+||++
T Consensus 125 i~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~ 192 (405)
T TIGR00891 125 VIESWPKH--LRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAE 192 (405)
T ss_pred HHHhCChh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 89999875 6799999999999999999999888877665422234566665555444 33445677753
No 129
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.61 E-value=1.4e-07 Score=96.24 Aligned_cols=140 Identities=12% Similarity=0.002 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+.+...+.+++.+++.||+|||+++.++.+..+++.+...+.. +.+ ...+...+.|++ ....+.++
T Consensus 52 ~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~l~G~~~~~~~~~~~~ 124 (406)
T PRK15402 52 TSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ----SIE---QFTLLRFLQGIGLCFIGAVGYA 124 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc----cHH---HHHHHHHHHHhHhhhHHHHHHH
Confidence 344456677778889999999999999999999888888776655443 211 112223345554 33455678
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 434 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~ 434 (445)
.+.+..|++ ++++.+++.+....++.++++.+.+.+.+..|- .+.|++.+++++++.+..++.+||++.
T Consensus 125 ~i~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 125 AIQESFEEA--DAIKITALMANVALLAPLLGPLVGAALIHVLPW--RGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHhChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc--cHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 888998875 456778888888888889999888887776553 356777777777777766667888754
No 130
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.60 E-value=1.8e-07 Score=95.06 Aligned_cols=182 Identities=12% Similarity=0.056 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
+.+..+++..++..++...+..+.+.|..| ++.++. .... .+..+.+.++.+...+.+.+.+++.||+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~~~~------~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~dr~g 82 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ--LGVTGH------SALN---MWSGLVFSITFLFSAIASPFWGGLADRKG 82 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH--hCCccc------hhHH---HHHHHHHHHHHHHHHHHHHHHHHHhhhhC
Confidence 345566777777777777777777777654 332211 0000 01123344566777888899999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhhhccCCCCcccchhHHHHHHHH
Q 013336 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 387 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l 387 (445)
||+++..+.+..+++++...+.. +.+ ...+...+.|+. .......+++.+..|++ ++|+.+|+.+....+
T Consensus 83 ~r~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 153 (408)
T PRK09874 83 RKIMLLRSALGMGIVMVLMGLAQ----NIW---QFLILRALLGLLGGFVPNANALIATQVPRN--KSGWALGTLSTGGVS 153 (408)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHh----hHH---HHHHHHHHHHHhhhhHHhHHHHHHHhcCHh--hhhHHHHHHHHHHHH
Confidence 99999998888887766554432 211 112222334443 22233345677777765 578889999999999
Q ss_pred HHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 388 PQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 388 ~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
+.++++.+.+.+.+..|. ...|.+.+++.+++.+...+++||.
T Consensus 154 g~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 154 GALLGPLAGGLLADSYGL--RPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999988776663 3567777777777777666666654
No 131
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.60 E-value=3.6e-07 Score=93.54 Aligned_cols=182 Identities=14% Similarity=0.076 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
|++..+.+..++...+...+..|.+.|+.+. ++.+ .. ..| ..+.+..+.=...=+..+++.+|+|
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~--gg~~-----------~~-~~g-~~~~l~~~aEi~~f~~~~~~~~r~g 271 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQEL--GGYS-----------GS-TIG-ILWALGVVAEIPFFFFSGRFLKRFG 271 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ccch-----------hh-HHH-HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3455677778888888888888888887652 1111 00 111 1111222333344467799999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeec----cccccc--eecchhHHHhhhhhccCCCCcccchhHHH
Q 013336 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIG----ANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLN 382 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n 382 (445)
.|++..++.+..++=....+... .+.+ ...... .+-|+. .+.......+.+..|++ .+++..|+++
T Consensus 272 ~~~ll~~a~~~~~vR~~l~a~~~---~~~~---~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~--~~at~Q~l~~ 343 (400)
T PF03825_consen 272 IKWLLLLALVAYAVRWLLYAYFS---DPWP---FIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE--LRATAQGLYS 343 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---CCcH---HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc--chHHHHHHHH
Confidence 99999998888776555555442 0222 111111 234543 33334456678888876 5677789888
Q ss_pred HH-HHHHHHHhhhccccccccccCcc----hhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 383 LA-IVIPQMIVSLGAGPWDALFGGGN----IPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 383 ~~-~~l~qii~~~~~g~l~~~~g~~~----~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
.. ..++..++++++|.+.+..|.+. ..++.+++++.++..++.+++-||++
T Consensus 344 ~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 344 ALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 75 57999999999999999887542 12345566655555555555555543
No 132
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.60 E-value=6.1e-08 Score=96.12 Aligned_cols=138 Identities=14% Similarity=0.173 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+-+..++++..+.+.+.|.++||+|+|...++|..++..+.+..++- +.|+ ..++.-.+.|++ ...+.-.+
T Consensus 110 ~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg-----~sy~--~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 110 LLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG-----NSYP--MLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred HHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc-----chhH--HHHHHHHHhhhhHHHHHhhhHH
Confidence 34456788999999999999999999999999998888766555444 4442 233345678888 55667789
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
++++.+|++. +||..||+.-.++.++-+++|..+|.+.+..|.+ +.|.+.++++++.+.+..+.++.
T Consensus 183 mlAd~f~~d~-er~~vmGialgfislG~lvgPpfGGilYe~~Gk~--aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 183 MLADVFPEDN-ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKS--APFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred HHHHHcccch-hhhHHHHHHHHHHhccceecCCcccchHhhcCCc--CcHHHHHHHHHHHHHHHHheeCc
Confidence 9999999874 6899999999999999999999999999999864 57999999999988887766644
No 133
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.60 E-value=6e-07 Score=97.28 Aligned_cols=230 Identities=10% Similarity=0.111 Sum_probs=129.6
Q ss_pred hhhHHHHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhccc---chhhhcc
Q 013336 37 AFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLT---SRACCAA 113 (445)
Q Consensus 37 i~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~---~~~~~~~ 113 (445)
..+.+++-.+..++....++...+|+.|.+|+++|++..++...+..+|..+|+++|+++ .+.+.... .+.....
T Consensus 172 ~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l--~~~~~d~~~~~~~~~~l~ 249 (633)
T TIGR00805 172 WLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFC--LQIYVDTGSVNTEDVILT 249 (633)
T ss_pred ehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHH--HhcccccccCCCCCCCCC
Confidence 455667888999999999999999999999999999999999999999999999999863 21110000 0000000
Q ss_pred c------cchhHHHHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccC
Q 013336 114 C------GNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVES 187 (445)
Q Consensus 114 ~------~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (445)
+ +.|+..|++.+++.++..++ ++.+||+......+.+.+..++ ....+.
T Consensus 250 ~~dprWiGaWwl~Fli~g~l~~l~~v~-l~~~p~~lp~~~~~~~~~~~~~-------~~~~~~----------------- 304 (633)
T TIGR00805 250 PTDPRWIGAWWIGFLICGGVALLTSIP-FFFFPKALPKEGKRVNVDVHET-------EKLEKS----------------- 304 (633)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHH-HHhCccccCCcccccchhhhhh-------hccccc-----------------
Confidence 0 13666788877666555443 3455654221111000000000 000000
Q ss_pred CcccchhhhhccccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCC
Q 013336 188 GHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKG 267 (445)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~ 267 (445)
.+ +++ +.. ......+...++.+.+.| .++...+..++...+++.+..|.+.|+.+ .|+-++.
T Consensus 305 -~~------------~~~-~~~-~~~~~~~~~~~~~Ll~n~-~f~~~~l~~~~~~~~~~~~~~~lP~yl~~-~~g~s~~- 366 (633)
T TIGR00805 305 -ED------------KSR-KKN-SDITKDFPKIIKRLLCNP-IYMLVILAQVIDSLAFNGYITFLPKYLEN-QYGISSA- 366 (633)
T ss_pred -cc------------ccc-hhh-hhhHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHH-
Confidence 00 000 000 000111222233344434 56667778888888888999999998875 5654431
Q ss_pred CChhhHHHHHHhhHHHHHHHHHHH-HHHHHhhhhhhhhhhcCc--hhhHHHHHHHHHHHH
Q 013336 268 NDHEVKFYDQGVREGAFGLLLNSV-VLGVSSFLIEPMCRWIGS--RLVWAISNFIVFACM 324 (445)
Q Consensus 268 ~s~~~~~y~~gv~~g~~~l~~~~i-~~~i~s~i~~~l~~r~g~--r~l~~~g~~~~ai~~ 324 (445)
+.|. .+....+ ..++.+++.++++||++. |+...++.++..+++
T Consensus 367 --------~ag~-----l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~ 413 (633)
T TIGR00805 367 --------EANF-----LIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSY 413 (633)
T ss_pred --------HHHH-----HhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHH
Confidence 1111 1112222 335667888999999984 455555555555543
No 134
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.59 E-value=1.6e-07 Score=94.24 Aligned_cols=173 Identities=18% Similarity=0.084 Sum_probs=106.3
Q ss_pred HHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHH
Q 013336 236 IVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAI 315 (445)
Q Consensus 236 l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~ 315 (445)
+..|+..++......+.+.|+.+ -++.++ .+ .| +....+.+...+.+.+.+++.||+||||.++.
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~-~~g~s~---------~~----~g-~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~ 68 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSE-EVRARP---------AM----IG-LFYTGSAIVGIAVSQLLATRSDYQGDRKGLIL 68 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHc-ccCCCH---------HH----HH-HHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Confidence 45666667766666667766654 244331 11 22 33345667777888889999999999987765
Q ss_pred -HHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHh
Q 013336 316 -SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIV 392 (445)
Q Consensus 316 -g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~ 392 (445)
+.+..+++.+..++.. + +. ...+...+.|.. .....-.++..+..|+++|.++...++.+....++++++
T Consensus 69 ~~~~~~~~~~~~~~~~~----~-~~--~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig 141 (375)
T TIGR00899 69 FCCLLAALACLLFAWNR----N-YF--LLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIG 141 (375)
T ss_pred HHHHHHHHHHHHHHhcc----h-HH--HHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHh
Confidence 4444444444433332 2 21 111111223322 233333566777776653333344688888888999999
Q ss_pred hhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 393 SLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 393 ~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
+.+.+.+.+..|- .+.|++.++++++..++.++++||.
T Consensus 142 ~~~~~~l~~~~~~--~~~f~~~~~~~~~~~~~~~~~~~~~ 179 (375)
T TIGR00899 142 PPLAFWLALGFGF--TVMFLTAALAFVLCGVLVWLFLPSY 179 (375)
T ss_pred hhHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9988888776653 3578888888887777776667764
No 135
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.56 E-value=7.5e-08 Score=98.71 Aligned_cols=182 Identities=13% Similarity=0.051 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
+.++.+++.+++..++......+.+.++.+ ++.++ .+ .| +....+.+..++.+.+.+++.||+|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~---------~~----~g-~~~~~~~l~~~~~~~~~G~l~dr~g 80 (417)
T PRK10489 17 PAFRAVFIARFISIFGLGLLGVAVPVQIQM--MTGST---------LQ----VG-LSVTLTGGAMFIGLMVGGVLADRYD 80 (417)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCH---------HH----HH-HHHHHHHHHHHHHHHhhHHHhhhcC
Confidence 566777888888888877777777766544 22221 11 22 3334566777788899999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHH
Q 013336 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIV 386 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~ 386 (445)
||++..++.++.+++++...+......+.++ ...+...+.|+. .....-.+++.+..|++ ++++.+++.+....
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 156 (417)
T PRK10489 81 RKKLILLARGTCGLGFIGLALNAFLPEPSLL--AIYLLGLWDGFFGSLGVTALLAATPALVGRE--NLMQAGAITMLTVR 156 (417)
T ss_pred CceEEEehHHHHHHHHHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHHHhhhhhhccCHH--HHHHHHHHHHHHHh
Confidence 9999998888887766554432211112111 111122234443 22233356677888765 57888999999999
Q ss_pred HHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 387 IPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 387 l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
+++++++.++|.+.+..|. .+.|++.++..+++.++. +.+||++
T Consensus 157 ~g~~~g~~l~g~l~~~~~~--~~~~~~~~~~~~~~~~~~-~~l~~~~ 200 (417)
T PRK10489 157 LGSVISPALGGLLIAAGGV--AWNYGLAAAGTFITLLPL-LRLPALP 200 (417)
T ss_pred HHHHhHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHH-HhCCCCC
Confidence 9999999999988876653 356777777766665544 4566643
No 136
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.55 E-value=3.4e-07 Score=93.11 Aligned_cols=176 Identities=10% Similarity=-0.095 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
+.+..+++..++..++......+.+.++.+ .++.++ . ..| +....+.+...+.+.+.|++.||+|
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~-~~g~s~----------~---~~g-~~~~~~~~~~~i~~~~~G~l~Dr~g 79 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHD-QLGFSA----------F---LAG-LVISLQYLATLLSRPHAGRYADTLG 79 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCccH----------H---HHH-HHHHHHHHHHHHhchhhHhHHhccC
Confidence 556778888888888877777777776654 233331 1 122 4445667778888999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhccccccC--Cc-ceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHH
Q 013336 309 SRLVWAISNFIVFACMATTAIISVISVREYS--GG-IEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNL 383 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~ 383 (445)
||+++.++.++.+++.+...+.... +.+. .+ ..++...+.|++ .......+++.+..|++ ++|+.+|+.+.
T Consensus 80 ~r~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~ 155 (399)
T PRK05122 80 PKKAVVFGLCGCALSGLLYLLAGLL--AAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL--HTGRVISWNGI 155 (399)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhh--hccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh--hhccchhhhhh
Confidence 9999999988887765444333211 1110 00 011223356655 33344456677888775 57888999999
Q ss_pred HHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 384 AIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 384 ~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
...++.++++.+++.+.+..|- ...+.+.++++++..++.
T Consensus 156 ~~~~g~~~g~~l~~~l~~~~g~--~~~~~~~~~~~~~~~~~~ 195 (399)
T PRK05122 156 ATYGALAIGAPLGVLLYHWGGL--AGLGLLIMLLALLGLLLA 195 (399)
T ss_pred hhhHHHHHHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHH
Confidence 9999999999988888776663 345555555555444433
No 137
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.55 E-value=9.5e-07 Score=91.10 Aligned_cols=101 Identities=18% Similarity=0.156 Sum_probs=72.0
Q ss_pred HHHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhh----ccccc
Q 013336 41 VIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACC----AACGN 116 (445)
Q Consensus 41 v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~----~~~~~ 116 (445)
.++-.+.+++. ...+..|+|++|..-++||.++.+..+....+|.++|+.++.+. ..++..-.. ..=++
T Consensus 134 L~~R~l~Gvg~-~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f------~~Lg~~G~~i~~~~~~n~ 206 (488)
T KOG2325|consen 134 LVARILTGVGV-GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF------TPLGEKGFMILPGLIFNM 206 (488)
T ss_pred HHHHHHcCcCc-ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH------hhhcCCceEEcCcceEEe
Confidence 34555555553 34578999999999999999999999999999999999888652 111100000 11146
Q ss_pred hhHHHHHHHHHHHHHHhheeeEeeccCCCCCC
Q 013336 117 LKAAFLVAVVFLTLCALVTIYFADEVPLTVNQ 148 (445)
Q Consensus 117 ~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~ 148 (445)
+..+-++.+++-++..++..++++|.+....+
T Consensus 207 YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~ 238 (488)
T KOG2325|consen 207 YTAPAWLMAILWIIYIVIILFFFKEVYRGIID 238 (488)
T ss_pred cchHHHHHHHHHHHHHHHHHhheeecccCccc
Confidence 77778888888888888888999998654433
No 138
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.54 E-value=1.3e-07 Score=94.28 Aligned_cols=137 Identities=13% Similarity=0.091 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
....+.+...+.+++.+++.||+|||+++.++.++.+++.++..+.. +.+ ...+...+.|++ .......++
T Consensus 35 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~~~~~ 107 (379)
T TIGR00881 35 LLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST----SLW---VMAALWALNGIFQGMGWPPCGRT 107 (379)
T ss_pred HHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh----hHH---HHHHHHHHHHhhccccCCchHHH
Confidence 33456677788899999999999999999999999888877666554 222 122223345554 445556788
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhh-hccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVS-LGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~-~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
+.+..|++ ++|+.+|+.+....++.++++ +..+.+.+..+. ...|++.+++.++.+++..++.||+
T Consensus 108 ~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 108 VTKWFSRS--ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW--HWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred HHHhcCHh--hheeeEeehhccchhHHHHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHheeeCCC
Confidence 99999875 578889999999999999998 455555554443 3467777777777667666677654
No 139
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.53 E-value=3.7e-07 Score=93.23 Aligned_cols=159 Identities=11% Similarity=0.005 Sum_probs=102.2
Q ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhh
Q 013336 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (445)
Q Consensus 226 ~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~ 305 (445)
..|+.+....+..++..++......|.+.+..+ ++.++ . ..| +.+..+++...+.+++.+++.|
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~g~s~----------~---~~g-~~~~~~~~~~~i~~~~~g~l~d 73 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA--LGLSP----------Q---QSA-SAFTLYGIAAAISAWISGVVAE 73 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHHHH--hCCCH----------H---HhH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 347778888888888777766566666666643 33331 1 122 3445677788888999999999
Q ss_pred hcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHH
Q 013336 306 WIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNL 383 (445)
Q Consensus 306 r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~ 383 (445)
|+||||++..+.++.+++.+......... +.+. ...+...+.|++ .......+.+.+..|++ ++|+.+|+.+.
T Consensus 74 r~g~k~~l~~~~~~~~~~~~~~~~~~~~~-~~~~--~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~ 148 (402)
T TIGR00897 74 IIGPLKTMMIGLLLWCVGHAAFIVFGLGH-ANYP--LILLFYGIRGLGYPLFAYSFLVWVVYNTKQD--NLSSAVGWFWA 148 (402)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHhccC-ccHH--HHHHHHHHHHcchHHHHhHHHHHHHHhCCHH--HHHHHHHHHHH
Confidence 99999999999888888765432221111 1111 111223334544 22222234456666664 67999999999
Q ss_pred HHHHHH-HHhhhccccccccccC
Q 013336 384 AIVIPQ-MIVSLGAGPWDALFGG 405 (445)
Q Consensus 384 ~~~l~q-ii~~~~~g~l~~~~g~ 405 (445)
...+++ ++++.+.+.+.+..|.
T Consensus 149 ~~~~g~~~~g~~~~~~l~~~~g~ 171 (402)
T TIGR00897 149 VYSIGIGVFGSYYSSYAIPAFGE 171 (402)
T ss_pred HHHHHHHHHHHHHHHhcccccch
Confidence 999998 5778877777776663
No 140
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.52 E-value=3.3e-07 Score=91.67 Aligned_cols=147 Identities=11% Similarity=0.050 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchh
Q 013336 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (445)
Q Consensus 232 ~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~ 311 (445)
+..++..+.....++.+..+.+.++.+ .++-++. + . .+....+.+...+.+++.+++.||+|||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~---------~----~-~~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 68 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKD-DLGLSTA---------Q----L-GNLVAVPVLAGAVLRIILGFLVDKFGPRY 68 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHH-HhCCCHH---------H----h-hHhhHHHHHHHHHHHHHHHHHHHHhCchH
Confidence 345555555555666666666655554 3444321 1 1 23344567777888999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHH
Q 013336 312 VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQM 390 (445)
Q Consensus 312 l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qi 390 (445)
.+.++.++.+++.+.+.+.. +.+. ...+...+.|++ .....-.+++++..|++ ++|+.+++.+....++..
T Consensus 69 ~~~~~~~~~~i~~~~~~~~~----~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~ 140 (366)
T TIGR00886 69 TTTLSLLLLAIPCLWAGLAV----QSYS--VLLLLRLFIGIAGGSFASCMPWISFFFPKK--IQGTALGLAAGWGNMGGG 140 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHh----hhHH--HHHHHHHHHHHhchhhHhHHHHHHHhcCHh--hhhHHHHHHHHHhHHHHH
Confidence 99999999988877666553 0121 112223335554 22233457788888875 578889999887778887
Q ss_pred Hhhhccccccc
Q 013336 391 IVSLGAGPWDA 401 (445)
Q Consensus 391 i~~~~~g~l~~ 401 (445)
+++.+.+.+..
T Consensus 141 ~~~~i~~~l~~ 151 (366)
T TIGR00886 141 VAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHH
Confidence 77777665544
No 141
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.51 E-value=3.3e-07 Score=93.29 Aligned_cols=138 Identities=12% Similarity=-0.037 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
....+.+...+..++.+++.||+|||+++.++.++.+++.+...+.. +.+ ...+...+.|++ .......++
T Consensus 55 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~G~~~~~~~~~~~~~ 127 (406)
T PRK11551 55 AFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAW----DFP---SLLVARLLTGVGLGGALPNLIAL 127 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHhhHHHHHHHHHHH
Confidence 33456667777889999999999999999999888887766555443 222 122334456665 334455788
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
+.|..|++ ++|+.+|+.+....++.++++.+.+.+.+..+- ...|++.+++.++..++..+++||+.
T Consensus 128 ~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 128 TSEAVGPR--LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW--RHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH--HHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999875 579999999999999999998887766665542 34677777766666665656677753
No 142
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.50 E-value=6.4e-07 Score=93.65 Aligned_cols=210 Identities=14% Similarity=0.125 Sum_probs=129.0
Q ss_pred HHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHH
Q 013336 44 FWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLV 123 (445)
Q Consensus 44 ~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i 123 (445)
.+++.+.-....++.-++++--..+++|++-.++.....++|+++|.++.+. ..+.-+- ..-..||+.|++
T Consensus 141 r~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g--~~~~~~~-------~~~~gW~~~FiI 211 (495)
T KOG2533|consen 141 RFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYG--VFKLNGS-------GGLAGWRWLFII 211 (495)
T ss_pred HHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHH--hhhhcCC-------CCcCCceeehhH
Confidence 3445555566778899999999999999999999999999999999888765 1111000 011479999999
Q ss_pred HHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhcccccc
Q 013336 124 AVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAE 203 (445)
Q Consensus 124 ~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (445)
.+++.++..++..+++|+.|....-.++ .|++.-.+ |.++
T Consensus 212 ~G~i~~~~gi~~f~~lp~~P~~~~fl~~-------------------------------------~ek~~~~~---~~~~ 251 (495)
T KOG2533|consen 212 EGVITLVLGIVVFFFLPDNPSKAWFLTD-------------------------------------EEKELVVE---RLRE 251 (495)
T ss_pred HHHHHHHHHheEEEEecCChhhccccch-------------------------------------HHHHHHHH---HHHh
Confidence 9888888888889999998853211100 00000000 0000
Q ss_pred ccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHH
Q 013336 204 DTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGA 283 (445)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~ 283 (445)
+.++.. .++.+.+++.+.++. +..+.+++..|+.+.-.+++..+.+.|+.+ ..+-+. .+ ...
T Consensus 252 ~~~~~~--~~~~~~~~~~~a~~d--p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~-~~~~s~---------~~----a~~ 313 (495)
T KOG2533|consen 252 SPSGGI--ENKFKWKGFKEALKD--PGVWPFSLCYFFLKLVNYGFSYWLPLYLKS-NGGYSE---------LQ----ANL 313 (495)
T ss_pred ccCCCc--ccccCHHHHHHHHhc--hhHHHHHHHHHHHhhccccHHHHHHHHHHc-CCCcCh---------HH----hcc
Confidence 000000 011334455555443 446778899999999999999999988876 111110 00 010
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh----cCchhhHHHHHHHHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRW----IGSRLVWAISNFIVF 321 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r----~g~r~l~~~g~~~~a 321 (445)
+. +.+.+..++..++.+.++|| ..+|.++.....++.
T Consensus 314 ls-~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 314 LS-TPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred cc-chHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 11 23445566778888899999 566666655444443
No 143
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.50 E-value=1.9e-07 Score=98.71 Aligned_cols=175 Identities=15% Similarity=0.101 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
|.++.+++.++++.+|.....+-..-++.+ + .++| ..+| +......+-.++.+++.|.++||++
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-l-t~S~-------------~~va-lv~~a~~LP~~Llsl~aG~laDr~d 73 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQ-L-TGSP-------------LMVA-LVQAASTLPILLLSLFAGALADRFD 73 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-hCCH-------------HHHH-HHHHHHHHHHHHHHHHHHHHhhccc
Confidence 678888888888777654433333333322 1 1221 1122 2222345566788999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHH
Q 013336 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIV 386 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~ 386 (445)
|||+.+.+.++.++..+..++.... +....+..+++..+.|++ ...+.-.+++.+..|++ +.....++.+....
T Consensus 74 rrrili~~~~~~~~~~~~L~~l~~~--~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~--~L~~A~al~s~~~n 149 (524)
T PF05977_consen 74 RRRILILSQLLRALVALLLAVLAFF--GLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKE--DLPAANALNSISFN 149 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHh--CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh--hHHHHHHHHHHHHH
Confidence 9999999998887766554444322 211101122223345555 33444589999999986 56777899999999
Q ss_pred HHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 387 IPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 387 l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
+.++++|.++|.++..+|. .++|.+-++..+++.++.
T Consensus 150 iar~iGPalgG~Lva~~G~--~~~f~inalsfl~~i~~l 186 (524)
T PF05977_consen 150 IARIIGPALGGILVAFFGA--AAAFLINALSFLISILAL 186 (524)
T ss_pred HHHhccchHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 9999999999999988885 356777776655544433
No 144
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.50 E-value=1.6e-07 Score=93.80 Aligned_cols=139 Identities=16% Similarity=-0.002 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+.+...+.+++.+++.||+|||+.+.++.++.+++.+..++.. +.+ ...+...+.|++ ...+...+
T Consensus 33 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~g~~~~~~~~~~~~ 105 (399)
T TIGR00893 33 YVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG----AYV---SLYILRVLLGAAEAPFFPGIIL 105 (399)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc----CHH---HHHHHHHHHHHHHHhhhhHHHH
Confidence 344466777888899999999999999999999888888776655543 222 122223456655 44455578
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
+++|..|++ ++|+.+|+.+....+++++++.+.+.+.+..|. .+.|.+.++++++..++..+.+||++
T Consensus 106 ~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 106 IVASWFPAS--ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSW--QWAFIIEGVLGIIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHhCCHH--HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCc--hHHHHHHHHHHHHHHHHhhheecCCC
Confidence 899999875 579999999999999999999998887776664 35777877777777776666666644
No 145
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.49 E-value=2.2e-07 Score=94.09 Aligned_cols=135 Identities=13% Similarity=-0.051 Sum_probs=91.1
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAEL 366 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~ 366 (445)
.+.+..++.+++.|++.||+|||++...+.+.+..+.+...... +-+ ..++...+.|++ ......++.+++.
T Consensus 34 ~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~R~l~G~g~~~~~~~~~~~~~~ 106 (368)
T TIGR00903 34 TYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF----NYE---WLLACQLLAALGQPFLLNAFAPAASQ 106 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 45556667788899999999999876655444433222111101 111 122233446665 2233445667899
Q ss_pred hccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 367 TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
.|++ ++|+.+++.+....++.++++++.+.+.+..|= ...|++.++++++.+++.++++||..
T Consensus 107 ~~~~--~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gW--r~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 107 IREE--RRDLVISLLSFAMYLGIIFALAAGLKIYTAGGL--QLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred cCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch--HHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9875 689999999999999999999998888776653 45788877878777777778888753
No 146
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.48 E-value=4.2e-07 Score=89.39 Aligned_cols=165 Identities=13% Similarity=0.051 Sum_probs=113.0
Q ss_pred HHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhH
Q 013336 234 VLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVW 313 (445)
Q Consensus 234 l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~ 313 (445)
++...+...++......+.+.+..+ ++.++ + ...+....+.+...+.+.+.+++.||+|||+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----------~----~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~ 67 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAED--LGLSA----------S----QAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVL 67 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHH--cCCCH----------H----HHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhh
Confidence 4556666666666666666666544 22221 0 112334456677788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHH
Q 013336 314 AISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMI 391 (445)
Q Consensus 314 ~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii 391 (445)
.++.++.+++.+...+.. +.+ ...+...+.|++ .......+++.|..|++ ++++.+++.+....+++++
T Consensus 68 ~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~ 138 (352)
T cd06174 68 LLGLLLFALGSLLLAFAS----SLW---LLLVGRFLLGLGGGALYPAAAALIAEWFPPK--ERGRALGLFSAGFGLGALL 138 (352)
T ss_pred HHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHcccccccHhHHHHHHHhCCcc--chhhhhhHHHHHHHHHHHH
Confidence 999999988877655542 221 122223345555 34445568889999885 6789999999999999999
Q ss_pred hhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 392 VSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 392 ~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
++.+.+.+.+..+. ...+.+.+++.+++.+..
T Consensus 139 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 139 GPLLGGLLAESLGW--RWLFLILAILGLLLALLL 170 (352)
T ss_pred HHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHH
Confidence 99999988876553 346777777666665544
No 147
>PRK12382 putative transporter; Provisional
Probab=98.45 E-value=8e-07 Score=90.21 Aligned_cols=182 Identities=5% Similarity=-0.092 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
+.+..+....++..++......+.+.|+.+ -++.++. ..| +.+..+.+...+.+.+.|+++||+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~-~lg~s~~-------------~~g-~~~s~~~~~~~i~~~~~G~l~Dr~g 79 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHH-DLGFGNT-------------MVG-IAVGIQFLATVLTRGYAGRLADQYG 79 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHH-hcCCcHH-------------HHH-HHHHHHHHHHHHHhhhhhHHHHhhc
Confidence 344455556666666655555556655554 2343321 122 3344577788888999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhcc---ccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHH
Q 013336 309 SRLVWAISNFIVFACMATTAIISVIS---VREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNL 383 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~ 383 (445)
||+++.++.+.++++.+......... .+.+. ...+...+.|++ ...+...+++.+..|++ ++|+.+|+.+.
T Consensus 80 ~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~--~r~~a~~~~~~ 155 (392)
T PRK12382 80 AKRSALQGMLACGLAGLAYLLAAILPVSAPFKFA--LLVVGRLILGFGESQLLTGALTWGLGLVGPK--HSGKVMSWNGM 155 (392)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhccccchhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc--ccchhhhHHHH
Confidence 99999998887776544322221110 01110 112223346655 33334456778888865 67999999999
Q ss_pred HHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 384 AIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 384 ~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
...++..+++.+++.+.+..|- ...+.+..+..++..++. ...||.
T Consensus 156 ~~~~g~~~g~~~~~~l~~~~g~--~~~~~~~~~~~~~~~~~~-~~~~~~ 201 (392)
T PRK12382 156 AMYGALAAGAPLGLLLHSHFGF--AALALTTMVLPLLAWAFN-GTVRKV 201 (392)
T ss_pred HHHHHHHHHHHHHHHHHhccCh--HHHHHHHHHHHHHHHHHH-HhccCC
Confidence 9999999999998888776653 234444444433333322 344543
No 148
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.45 E-value=7.4e-07 Score=90.51 Aligned_cols=139 Identities=15% Similarity=0.182 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
.+..+.+...+...+.++++||+|||+.+.++.+..+++.+...+.. +.+ ...+...+.|++ .......++
T Consensus 48 ~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~~~g~~~~~~~~~~~~~ 120 (394)
T PRK11652 48 VMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH----SLT---VLIAASAIQGLGTGVGGVMARTL 120 (394)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc----cHH---HHHHHHHHHHhhhhHHHHHHHHH
Confidence 34456667778889999999999999999998888887766544432 211 112223345544 223344566
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCC
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 434 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~ 434 (445)
..+..+.+ +++..+++.+....++.++++.+.+.+.+..|- ..+|.+.+++.++.++...+++||++.
T Consensus 121 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~--~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 121 PRDLYEGT--QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW--RACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh--HHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 67776654 578888999999999999999988888776553 356777776666655555567787543
No 149
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.44 E-value=6.9e-07 Score=103.20 Aligned_cols=113 Identities=10% Similarity=-0.027 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+...++.+..++.+++.|+++||+|||++++++.++.++..+++.+.... +.++ ..++...+.|++ .....-++
T Consensus 51 ~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~--~l~~~r~l~G~~~~~~~~~~~~ 126 (1146)
T PRK08633 51 IVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL--GWFW--LAFAVTFLLGAQSAIYSPAKYG 126 (1146)
T ss_pred HHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH--ccHH--HHHHHHHHHHHHHHhhchHHHh
Confidence 44445667778889999999999999999998877665554443333211 1111 122233456655 44555578
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccccc
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL 402 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~ 402 (445)
+++++.|++ ++|..+|+.+....++.++++++++.+.+.
T Consensus 127 ~i~~~~~~~--~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 127 IIPELVGKE--NLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhHHhcCcc--cchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999986 679999999999999999999999988765
No 150
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.42 E-value=6.2e-07 Score=91.29 Aligned_cols=181 Identities=12% Similarity=0.004 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
|.++.++...++.+.++..+..+.+.|+.+ .++.++. + .| +.+.++.+...+.+.+.|+++||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~---------~----~g-~~~~~~~l~~~i~~~~~G~l~Dr~g 66 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHD-VNGLSKT---------D----TG-IVFSCISLFSILFQPLFGLISDKLG 66 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH---------H----HH-HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345666677888888888888888888776 3444321 1 22 3455678888899999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhcc---ccccCCcceeeeccccccceecchhHHHhhhhhccCCCCcccchhHHHHHH
Q 013336 309 SRLVWAISNFIVFACMATTAIISVIS---VREYSGGIEHGIGANQAIKITYSVPFAITAELTADSGGGQGLAIGVLNLAI 385 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Gi~~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~ 385 (445)
||+.+..+.+..+++........... .+.+. ...+...+.|+...... ..+..+.++..++++.++|......
T Consensus 67 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~ 142 (396)
T TIGR00882 67 LKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILV--GAIVGGLYLGFVFSAGA--GAIEAYIEKVSRNSNFEYGKARMFG 142 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH--HHHHHHHHHHHHhccch--hhHHHHHHHhhhhcccccchhhhhc
Confidence 99999887666655433221111000 00000 00011112232211111 2223333332234567788888888
Q ss_pred HHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 386 VIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 386 ~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
.++..+++.++|.+.+. +. ...|++.+++.++.+++..+..||
T Consensus 143 ~~g~~~g~~~~g~l~~~-~~--~~~f~~~~~~~~~~~~~~~~~~~~ 185 (396)
T TIGR00882 143 CVGWALCASIAGILFSI-DP--QIVFWLGSGFALILMLLLMFAKPK 185 (396)
T ss_pred ccHHHHHHHHHhhhhcc-Cc--hHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999998877653 42 357888888877777666554555
No 151
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.42 E-value=6.8e-07 Score=92.42 Aligned_cols=143 Identities=15% Similarity=0.086 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+.+...+.+++.+++.||+|||+++.++.++.+++.+.+.+..... +... ...+...+.|+. .......+
T Consensus 65 ~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~l~~~~~l~g~~~g~~~~~~~~ 141 (438)
T TIGR00712 65 FALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWAT-SSIA--IMFVLLFLNGWFQGMGWPPCGR 141 (438)
T ss_pred HHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcccccc-chHH--HHHHHHHHHHHHhhcchHHHHH
Confidence 344456677778899999999999999999998888888766554432111 1110 011112234443 33344457
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
.+.+..|++ ++|+.+|+.++...++..+++.+.+.+.+...+. ...|++.++++++.++...+++||+
T Consensus 142 ~i~~~~~~~--~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w-~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 142 TMVHWWSQS--ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDW-HAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHHhcCcc--cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHhccCC
Confidence 788888875 5799999999999999999887766544332222 3578888888887777676777764
No 152
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.41 E-value=8.4e-07 Score=92.48 Aligned_cols=188 Identities=12% Similarity=0.001 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhh----
Q 013336 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR---- 305 (445)
Q Consensus 230 ~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~---- 305 (445)
++..+|.+.+-.+++|.....|.+.|+.+ .+-++ ....+...+..++.++...+.|.++|
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~--lg~~~--------------~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~s 68 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQE--LGIPH--------------AWASIIWLCGPLSGLLVQPLVGYLSDRCTS 68 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCH--------------HHHHHHHHHHHHHHHHHHhHeeehhcCCCC
Confidence 45556667776777887777777776643 22221 11123444567788888999999999
Q ss_pred hcCchhhHHH-HHHHHHHHHHHHHHhhhcc----ccccC-Ccceeeecccccc-----c-eecchh-HHHhhhhhccCCC
Q 013336 306 WIGSRLVWAI-SNFIVFACMATTAIISVIS----VREYS-GGIEHGIGANQAI-----K-ITYSVP-FAITAELTADSGG 372 (445)
Q Consensus 306 r~g~r~l~~~-g~~~~ai~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~Gi-----~-~~~svP-~aLls~~~~~~~~ 372 (445)
|+||||.+++ +.+..++++..+++..... .+... .....++..+.|+ . .+...| -|+++|..|+++|
T Consensus 69 r~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~ 148 (477)
T TIGR01301 69 RFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR 148 (477)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH
Confidence 5999999997 4666666555555433110 00000 0000011122222 2 122233 5899999998766
Q ss_pred CcccchhHHHHHHHHHHHHhhhccccc--ccccc-----------CcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 373 GQGLAIGVLNLAIVIPQMIVSLGAGPW--DALFG-----------GGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 373 ~~G~~~gi~n~~~~l~qii~~~~~g~l--~~~~g-----------~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
+.+...++.+.+..++++++.++++.. .+.++ .+...+|++++++.+++.+.+.+.+||..
T Consensus 149 ~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 149 RTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 668899999999999999999987754 22111 12245699999999999998989999864
No 153
>PRK11043 putative transporter; Provisional
Probab=98.40 E-value=1e-06 Score=89.77 Aligned_cols=136 Identities=11% Similarity=-0.022 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
...++.+...+..++.+++.||+|||+++..+.++.+++.+.+.+.. +.+ ...+...+.|++ .......++
T Consensus 46 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~l~G~~~~~~~~~~~~~ 118 (401)
T PRK11043 46 SLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE----SAA---QLLVLRFVQAVGVCSAAVIWQAL 118 (401)
T ss_pred HHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc----CHH---HHHHHHHHHHhhhHHHHHHHHHH
Confidence 33456667778889999999999999999999888887766555443 211 122223344544 222334577
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
+.+..|++ +++..++..+....++..+++.+.+.+.+..|- ...|++.+++.++..++..++.|+
T Consensus 119 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 119 VIDRYPAQ--KANRVFATIMPLVALSPALAPLLGAWLLNHFGW--QAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHHhcCcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh--HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88888875 457778888888889999999999888877663 356777777777666655444333
No 154
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.39 E-value=8e-07 Score=91.25 Aligned_cols=181 Identities=14% Similarity=0.077 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
+.++.+.+..|+.++++..+..|.+.|+.+ .++-++ .+ .| +....+.+...+.+.+.|++.||+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~---------~~----~g-~~~s~~~l~~~i~~~~~G~l~Dr~g 74 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHD-INGLSG---------TD----TG-IIFSANSLFALLFQPLYGLISDKLG 74 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH---------HH----HH-HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345566667777888777778888887765 234332 12 22 3344677788899999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-cccccc--ceecchhHHHhhhhhccCCCCcccchhHHHHHH
Q 013336 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GANQAI--KITYSVPFAITAELTADSGGGQGLAIGVLNLAI 385 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi--~~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~ 385 (445)
||+...++..+.+++.......... .... ....+ ..+.++ +........++..+.++..+++|..+|..+...
T Consensus 75 ~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 150 (420)
T PRK09528 75 LKKHLLWIISGLLVLFGPFFIYVFA--PLLQ--YNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWG 150 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH--HHHH--HHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhh
Confidence 9999887766655443221111000 0000 00001 001111 111111112233333322245788999999999
Q ss_pred HHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 386 VIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 386 ~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
.+++.+++.+.|.+.+. +. ..+|++.++.++++.++.++..||
T Consensus 151 ~~g~~i~~~~~g~l~~~-~~--~~~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 151 SLGWALCAFIAGILFNI-NP--QINFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred hHHHHHHHHHHHHHHhc-Cc--hHhHHHHHHHHHHHHHHHhccccc
Confidence 99999999998887764 32 357888887777776666555544
No 155
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.39 E-value=1e-06 Score=89.19 Aligned_cols=150 Identities=11% Similarity=0.015 Sum_probs=104.7
Q ss_pred CHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 013336 228 PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI 307 (445)
Q Consensus 228 P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~ 307 (445)
+|++..++..+++.+++......+.+.|..+ ++.++ . ..| +.+..+.+...+.+.+.+++.||+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~s~----------~---~~G-~~~s~~~l~~~~~~~~~g~l~dr~ 68 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ--EHLPT----------W---QVG-VVSSSYFTGNLVGTLLAGYVIKRI 68 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--cCCCH----------H---HHH-HHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3567778888888888888888888877764 33321 0 122 444466777788899999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHH
Q 013336 308 GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAI 385 (445)
Q Consensus 308 g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~ 385 (445)
|||+.+.++.++.+++++..++.. +.+ ...+...+.|++ ....+-.+.+.+..+++ ++|+.+|+.+...
T Consensus 69 g~k~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 139 (381)
T PRK03633 69 GFNRSYYLASLIFAAGCAGLGLMV----GFW---SWLAWRFVAGIGCAMIWVVVESALMCSGTSR--NRGRLLAAYMMVY 139 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----cHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHH
Confidence 999999999999888776655543 221 122223445655 22222234455666654 5799999999999
Q ss_pred HHHHHHhhhcccccccc
Q 013336 386 VIPQMIVSLGAGPWDAL 402 (445)
Q Consensus 386 ~l~qii~~~~~g~l~~~ 402 (445)
.+++.+++.+++.+.+.
T Consensus 140 ~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 140 YLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHhccccc
Confidence 99999999999887664
No 156
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.38 E-value=1.1e-06 Score=96.29 Aligned_cols=136 Identities=12% Similarity=0.027 Sum_probs=94.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+..++.+++.++++||+|||+.++++.++.+++.+++++.. +.+ ..++...+.|++ ....+.+++++
T Consensus 209 s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~----s~~---~llv~R~l~G~g~g~~~p~~~~~is 281 (742)
T TIGR01299 209 LIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ----GYG---FFLFCRLLSGFGIGGAIPIVFSYFA 281 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh----hHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566778899999999999999999999888888776666553 211 122233445655 44567789999
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccC-----------cchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG-----------GNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~-----------~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
|..|.+ .+|..+++.+.+..++.++++.++..+....|- .-.+.+++.++.++++ ++..+++||+
T Consensus 282 E~~p~~--~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPES 357 (742)
T TIGR01299 282 EFLAQE--KRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPES 357 (742)
T ss_pred HHCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCC
Confidence 999986 679999999999999999988766544432220 0123455666655554 4455788997
No 157
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.38 E-value=6e-07 Score=90.33 Aligned_cols=137 Identities=12% Similarity=0.112 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHh
Q 013336 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAIT 363 (445)
Q Consensus 286 l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLl 363 (445)
...+.+...+..++.+++.||+|||+++..+.++.+++.....+.. +.+ ...+...+.|++ .......+++
T Consensus 32 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~----~~~---~~~~~~~l~g~~~~~~~~~~~~~~ 104 (377)
T PRK11102 32 LSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ----TID---QLIYMRFLHGLAAAAASVVINALM 104 (377)
T ss_pred HHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc----cHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666778889999999999999999999988888776655443 211 122223345554 3334446788
Q ss_pred hhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 364 AELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 364 s~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
.+..|++ ++|+.+|+.+....++.++++.+.+.+.+..|- ...|++.++++++..++..+++||++
T Consensus 105 ~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 105 RDMFPKE--EFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSW--HAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh--HHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 8888875 679999999999999999999998888776653 35677777777777776666777754
No 158
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.38 E-value=1.1e-06 Score=89.43 Aligned_cols=180 Identities=16% Similarity=0.075 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCc
Q 013336 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (445)
Q Consensus 230 ~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~ 309 (445)
+...+.+..|+..++...+..+.+.|+.+ -++-++ .+ .| +......+...+.+.+.+.+.||+|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~-~~~~s~---------~~----~g-~~~~~~~~~~~~~~~~~~~~~dr~g~ 80 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTD-EVHARP---------AM----VG-FFFTGSAVIGILVSQFLAGRSDKRGD 80 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCH---------HH----HH-HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34556777888888877777777777654 233321 01 22 11112334445555555555999999
Q ss_pred hhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccc-cc-eecchhHHHhhhhhccCCCCcccchhHHHHHHH
Q 013336 310 RLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQA-IK-ITYSVPFAITAELTADSGGGQGLAIGVLNLAIV 386 (445)
Q Consensus 310 r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-i~-~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~ 386 (445)
||.++ .+.+..+++.+...+.. +.+ ..++...+.+ .. .....-.+++.+..++++|..+.+.++.+....
T Consensus 81 r~~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (393)
T PRK15011 81 RKSLIVFCCLLGVLACTLFAWNR----NYF---VLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVS 153 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhh----HHH---HHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Confidence 98765 45555555444433332 211 1111111122 22 222222455555555443334566688888999
Q ss_pred HHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 387 IPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 387 l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
++.++++.+++.+.+..|- ...|++.++.+++.++.+++++||.+
T Consensus 154 lg~~~g~~i~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 154 LAWVIGPPLAYALAMGFSF--TVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHhhHHHHHHHHhcCh--HHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 9999999999988877764 35788888888877777777788764
No 159
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.36 E-value=7.5e-06 Score=86.40 Aligned_cols=98 Identities=14% Similarity=0.079 Sum_probs=64.1
Q ss_pred hhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccc--cCCcceeeeccccccc--eecchhHHHhhhhhccCCC
Q 013336 297 SFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVRE--YSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGG 372 (445)
Q Consensus 297 s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~ 372 (445)
+...+++.+|++.++.+.+|.++++++++.+.+......+. .+.+..+....+.|++ ....+-++++++..|++
T Consensus 337 ~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~-- 414 (500)
T PRK09584 337 AAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQR-- 414 (500)
T ss_pred HHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHH--
Confidence 33446677777777888899999999988766654321100 0000111123345555 45566678899999986
Q ss_pred CcccchhHHHHHHHHHHHHhhhcc
Q 013336 373 GQGLAIGVLNLAIVIPQMIVSLGA 396 (445)
Q Consensus 373 ~~G~~~gi~n~~~~l~qii~~~~~ 396 (445)
.+|..+|+..+...+++.++..+.
T Consensus 415 ~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 415 LMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 679999999888777777776655
No 160
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.35 E-value=7.3e-06 Score=84.85 Aligned_cols=119 Identities=16% Similarity=0.232 Sum_probs=75.2
Q ss_pred hhHhhch-hhHHhhhcCCcccccccCCCcceehhhHHHH-----------------------HHHHhccccccchhhHHH
Q 013336 6 VIIIGFS-ADIGYILGDTKEHCSKFRGTRTRAAFVFVIG-----------------------FWLLDLANNTVQGPARAL 61 (445)
Q Consensus 6 l~~l~~~-~~ig~~l~d~~~~~~~~~~~~~~~i~~~v~g-----------------------~~lld~s~n~~~~p~~A~ 61 (445)
+.-+||+ |.+-..++|.= +-..-|||++.++..+++ .++..++.-.+...+.|+
T Consensus 33 ~~~lPw~~Kp~~g~lsD~~--pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~ 110 (433)
T PF03092_consen 33 LASLPWSIKPLYGLLSDSF--PIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADAL 110 (433)
T ss_pred HHhCchHHhhhHHhhcccc--cccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHH
Confidence 3444544 44455667864 233346677666533333 333444444566788889
Q ss_pred HhcCCC--ccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEe
Q 013336 62 LADLSG--PDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFA 139 (445)
Q Consensus 62 i~D~~p--~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v 139 (445)
+.|... |+.|+...++.-....+|.++|..+++.+ .+. .+.+..|.+.+++..+.++..++..
T Consensus 111 vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l--~~~-------------~~~~~~f~i~~~~~~l~~~~~~~~~ 175 (433)
T PF03092_consen 111 VVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPL--LDS-------------FGPQGVFLISAALPLLMLIVALFLL 175 (433)
T ss_pred HHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhh--hhc-------------CCCeEEehHHHHHHHHHHHHHHHhh
Confidence 999884 34467777788788889999999888762 211 2456778887776666666666666
Q ss_pred ec
Q 013336 140 DE 141 (445)
Q Consensus 140 ~E 141 (445)
+|
T Consensus 176 ~e 177 (433)
T PF03092_consen 176 EE 177 (433)
T ss_pred hh
Confidence 66
No 161
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.30 E-value=2.1e-06 Score=88.17 Aligned_cols=140 Identities=11% Similarity=-0.021 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+.+...+.+.+.+++.||+|||+++.++.++++++.+...+..... +.+ ..++...+.|++ .......+
T Consensus 75 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~r~l~G~~~~~~~~~~~~ 150 (481)
T TIGR00879 75 LVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFAL-SVE---MLIVGRVLLGIGVGIASALVPM 150 (481)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcccc-chH---HHHHHHHHHHhhhhHHHhHHHH
Confidence 344466778888899999999999999999999998888776654443111 100 122233456665 44455678
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcc---ccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGA---GPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~---g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
++++..|++ ++|+.+++.+....+++++++++. +.+.+..|- .+.|.+.++..++..+ ..+++||+
T Consensus 151 ~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w--~~~f~~~~~~~~~~~~-~~~~l~~~ 219 (481)
T TIGR00879 151 YLSEIAPKA--LRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGW--RIPLGLQLIPAGLLFL-GLFFLPES 219 (481)
T ss_pred HHHccCChh--hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccH--HHHHHHHHHHHHHHHH-HHhcCCCC
Confidence 899999876 578899999999999999999987 544444432 4567776665555444 44567775
No 162
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.29 E-value=1.1e-06 Score=86.87 Aligned_cols=134 Identities=16% Similarity=0.032 Sum_probs=94.8
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-ccccccc-eecchhHHHhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GANQAIK-ITYSVPFAITAE 365 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~-~~~svP~aLls~ 365 (445)
.|++..+++|...|.++||+|||.++.++.+..++.++.-+.-..+ ..+++ -.+.|+. -..++--|+++|
T Consensus 76 sF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F--------~afv~aR~l~Gi~kgnl~v~rAiisd 147 (451)
T KOG2615|consen 76 SFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF--------AAFVLARFLGGIFKGNLSVIRAIISD 147 (451)
T ss_pred HHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHhhhhccCchHHHHHHHHh
Confidence 5778899999999999999999999999988888876654443211 12223 3456666 445666799999
Q ss_pred hhccCCCCcccchhHHHHHHHHHHHHhhhccccccc---cccCcchhHHHHHHHHHHHH---HHhhheeccCCC
Q 013336 366 LTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA---LFGGGNIPAFVLASLSALAG---GVVATLKLPHLS 433 (445)
Q Consensus 366 ~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~---~~g~~~~~~f~~~~v~~ll~---~~~~~~~vpe~~ 433 (445)
+.+++ .++..|+..+++..++-+++|.++|.+.. ..|.. +-+..+-+.++++ .++..+++|||-
T Consensus 148 V~sek--~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~--p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 148 VVSEK--YRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSY--PFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred hcChh--hccceeeeeehhhhcchhhcchhhhHHHhhHhhhccC--chHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99985 67888999999999999999999998766 55543 2222122222222 334446889973
No 163
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.28 E-value=2.4e-06 Score=88.91 Aligned_cols=145 Identities=14% Similarity=-0.019 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhcc----ccccCCcc-eeeeccccccc--eec
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVIS----VREYSGGI-EHGIGANQAIK--ITY 356 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~Gi~--~~~ 356 (445)
+....+.+..++.+++.+++.||+|||+++.++.++++++.+..++..... .+.+..+. .++.-.+.|++ ...
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~ 138 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLAS 138 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHh
Confidence 444567778888899999999999999999999999888776655432100 01110000 11223456665 455
Q ss_pred chhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccc--------ccccCcchhHHHHHHHHHHHHHHhhhee
Q 013336 357 SVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD--------ALFGGGNIPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 357 svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~--------~~~g~~~~~~f~~~~v~~ll~~~~~~~~ 428 (445)
....++++|+.|++ .+|+.+|+.+....+++++++.+.+.+. +..| ..++|++.++.+++..+ ..++
T Consensus 139 ~~~~~~i~e~~~~~--~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g--Wr~~f~~~~~~~~~~~~-~~~~ 213 (479)
T PRK10077 139 MLSPMYIAEIAPAH--IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDG--WRYMFASEAIPALLFLM-LLYF 213 (479)
T ss_pred hHHHHHHHhhCChh--hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCC--hHHHHHHHHHHHHHHHH-HHHc
Confidence 56678899999986 5799999999999999999876654332 2222 24567787777777654 4567
Q ss_pred ccCCC
Q 013336 429 LPHLS 433 (445)
Q Consensus 429 vpe~~ 433 (445)
+||+.
T Consensus 214 l~~s~ 218 (479)
T PRK10077 214 VPETP 218 (479)
T ss_pred CCCCc
Confidence 88864
No 164
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.27 E-value=1.6e-06 Score=90.54 Aligned_cols=140 Identities=15% Similarity=0.059 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+...+..++.|++.||+|+|+++.++.++.+++.+.+++......+.+. ...+...+.|++ ...+...++++
T Consensus 71 s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~ 148 (467)
T PRK09556 71 LGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLG--LMIALWALSGFFQSTGGPCSYSTIT 148 (467)
T ss_pred HHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHH--HHHHHHHHHHHHHhccchHHHHHHH
Confidence 35666777788999999999999999998888887776655543111001111 122223345655 44455678899
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccc-cCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF-GGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~-g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
+..|++ ++|+.+|+.+....++.++++.+...+.+.. +..-...|.+.+++.++.+++.++++|
T Consensus 149 ~~~~~~--~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~ 213 (467)
T PRK09556 149 RWTPRR--KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGS 213 (467)
T ss_pred HHcCcc--ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCC
Confidence 999986 6799999999999999999988766555432 211123566666666665555554443
No 165
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.26 E-value=3e-06 Score=86.83 Aligned_cols=135 Identities=12% Similarity=0.017 Sum_probs=93.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+...+.+.+.+++.||+|||+++.++.++.+++.+..++.. +.+ ...+...+.|++ .......+++.
T Consensus 60 ~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~----~~~---~l~~~r~l~G~g~g~~~~~~~~~~~ 132 (426)
T PRK12307 60 TAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS----GVI---MLTLSRFIVGMGMAGEYACASTYAV 132 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh----HHH---HHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 345666777888999999999999999999999998877666654 211 122223456655 44555678889
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
|..|++ ++|+.+|+.+....++.++++.+.+.+.+..|- .+.|+++.+..++ .++.....||++
T Consensus 133 ~~~~~~--~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w--~~~f~i~~~~~~~-~~~~~~~~p~~~ 196 (426)
T PRK12307 133 ESWPKH--LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW--RAAFFVGLLPVLL-VIYIRARAPESK 196 (426)
T ss_pred HhCCHh--HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH--HHHHHHHHHHHHH-HHHHHHHCCCCh
Confidence 999875 578899999999999999998887777666552 3456654433333 233333456653
No 166
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.26 E-value=2.3e-07 Score=93.82 Aligned_cols=136 Identities=14% Similarity=0.023 Sum_probs=108.7
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAE 365 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~ 365 (445)
.+.++-.+++.+.+.+.||++||.++.+|..+-+++.++.++...+. ...++-++.|++ +..++-.+++++
T Consensus 76 vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fw-------q~~l~R~~vGiGeAs~~~ia~s~IaD 148 (493)
T KOG1330|consen 76 VFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFW-------QVLLCRGFVGIGEASYSPIAPSLIAD 148 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHH-------HHHHHHHHhccchhhhcccchhHhhh
Confidence 45667778899999999999999999999999999988888775331 244456788988 556666699999
Q ss_pred hhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 366 LTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 366 ~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
.+|++ .|++.+|++|.++.++-.++-..++.+-++.+-. .+.|...++++++.++++.++++|.+
T Consensus 149 ~f~~~--~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~W-r~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 149 SFPDD--KRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWW-RWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred cCcch--hhhHHHHHhhhhcccccceeEEeeeeeccCccce-EEEEEeehHHHHHHHHHHHhhccCcc
Confidence 99987 6789999999999999888877766666665533 46788889999998888888886643
No 167
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.26 E-value=2.8e-06 Score=89.00 Aligned_cols=136 Identities=13% Similarity=0.049 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
....+.+...+..++.+++.||+|||+++.++.++.+++.+.+.+.. +.+ ...+...+.|++ .......++
T Consensus 60 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~l~G~~~~~~~~~~~~~ 132 (496)
T PRK03893 60 LISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAP----GYW---TLFIARLVIGMGMAGEYGSSATY 132 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh----HHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345666777789999999999999999999988888777666543 211 122223445654 344555688
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
+.+..|++ .+|+.+|+.+....+++++++.+.+.+.+..|- .+.|.++.+..++ .++.....||+
T Consensus 133 ~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w--~~~f~~~~~~~~~-~~~~~~~~p~~ 197 (496)
T PRK03893 133 VIESWPKH--LRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW--RALFFIGILPIIF-ALWLRKNLPEA 197 (496)
T ss_pred HHHHcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH--HHHHHHHHHHHHH-HHHHHHhCCCc
Confidence 89999876 578889999999999999999999888776553 3456655443333 33334456664
No 168
>TIGR00898 2A0119 cation transport protein.
Probab=98.25 E-value=1.8e-06 Score=90.74 Aligned_cols=134 Identities=10% Similarity=0.026 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+...++.+..++.+++.++++||+|||++++++.++.+++.+.+++.. +.+ ...+...+.|++ ....+.++
T Consensus 131 ~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~----~~~---~~~~~r~l~G~~~~~~~~~~~~ 203 (505)
T TIGR00898 131 LTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP----NYT---VFLVFRLLVGMGIGGIWVQAVV 203 (505)
T ss_pred HHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc----cHH---HHHHHHHHHHhhccchHHHHHH
Confidence 344456667778899999999999999999999988888776665543 211 122234456666 44667789
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
+++|..|++ ++|..+++.+....++.++++.++..+.+ + .+.+++.++.+++..++. +++||+
T Consensus 204 ~~~e~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-w----r~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 204 LNTEFLPKK--QRAIVGTLIQVFFSLGLVLLPLVAYFIPD-W----RWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred HhheecChh--hhHHHHHHHHHHHHHHHHHHHHHHHHhhH-H----HHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 999999986 57888899999999999998887665544 1 356777777777766655 678874
No 169
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.24 E-value=3.2e-06 Score=97.79 Aligned_cols=139 Identities=12% Similarity=-0.009 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHH--HHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchh
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFI--VFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVP 359 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~--~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP 359 (445)
+...++.+..++.+.+.|+++||+|||++....... ....+....+.. .+.+ ..++...+.|++ ....+.
T Consensus 56 l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~---~s~~---~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 56 LAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHL---NSVP---LLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred HHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH---hhHH---HHHHHHHHHHHHHHhhchHH
Confidence 455567777888999999999999999975432111 111111111211 1222 123334557766 566788
Q ss_pred HHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 360 FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 360 ~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
++++.+..|++ +++..+|+.+....+++++++.++|.+.+..|- .+.|+...++.+++ +++.+++|+++
T Consensus 130 ~a~l~~~~~~~--~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~ 198 (1140)
T PRK06814 130 YSILPDHLNKD--ELLGANALVEAGTFIAILLGTIIGGLATISGNF--VILVALLMGIAVLG-WLASLFIPKTG 198 (1140)
T ss_pred HHhhHhhcCcc--ccchhhHHHHHHHHHHHHHHHHHHHHHHhcccc--HHHHHHHHHHHHHH-HHHHhhCCCCC
Confidence 99999999986 678899999999999999999999998876653 34554444444444 33445666543
No 170
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.24 E-value=3.9e-06 Score=87.21 Aligned_cols=141 Identities=11% Similarity=-0.004 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
....+.+...+.+.+.|+++||+|+|++++++.++.+++.+..++......+.+ ...+...+.|+. .....-.++
T Consensus 68 ~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~l~gi~~g~~~~~~~~~ 144 (452)
T PRK11273 68 ALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIA---VMFVLLFLCGWFQGMGWPPCGRT 144 (452)
T ss_pred HHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHH---HHHHHHHHHHHHHhccchHHHHH
Confidence 334566677788999999999999999999999988887776655431110111 112222345554 222222356
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHH-hhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMI-VSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii-~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
+.+..|++ .+|+.+|+.|....++..+ +++....+....| . .+.|++.++.+++.+++..+++||+
T Consensus 145 ~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g-w-~~~f~i~~~~~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 145 MVHWWSQK--ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND-W-HAALYMPAFAAILVALFAFAMMRDT 211 (452)
T ss_pred HHHhCChH--HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHHHHHHHccCC
Confidence 77877765 5789999999998887643 4443222222122 2 4567777777777666666666654
No 171
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.20 E-value=4.2e-06 Score=85.35 Aligned_cols=126 Identities=11% Similarity=-0.014 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+.+...+.+.+.+++.||+|||+++..+.++++++.+..++.+ +.+ ..++...+.|++ .......+
T Consensus 48 ~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~----~~~---~ll~~r~l~Gig~~~~~~~~~~ 120 (393)
T PRK09705 48 LLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP----QSA---LLLSSALLGGVGIGIIQAVMPS 120 (393)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc----chH---HHHHHHHHHHhHHHHHhhhhhH
Confidence 444456667778899999999999999999999999999988777664 222 122334456666 33444457
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHH
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALA 420 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll 420 (445)
++.+..| + ++|..+|+.+....++..+++.+.+.+.+..++. ...+.+.++..++
T Consensus 121 ~~~~~~~-~--~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w-~~~~~~~~~~~~~ 175 (393)
T PRK09705 121 VIKRRFQ-Q--RTPLVMGLWSAALMGGGGLGAAITPWLVQHSETW-YQTLAWWALPAVV 175 (393)
T ss_pred HHHHHcc-c--cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHHH
Confidence 7788776 3 4799999999999999999998888777654322 2334444444333
No 172
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.18 E-value=2.8e-06 Score=84.53 Aligned_cols=135 Identities=17% Similarity=0.070 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+.+...+.+++.+++.||+|||+++.++.++.+++.+.+++.. +.+ ...+...+.|++ ........
T Consensus 42 ~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~g~~~~~~~~~~~~ 114 (377)
T TIGR00890 42 IWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD----SLA---ALYLTYGLASAGVGIAYGIALN 114 (377)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH----HHH---HHHHHHHHHhHHHHHHHHhHHH
Confidence 344466777888899999999999999999999999988887766654 222 122222345554 23333345
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
.+.+..|+ ++|+.+++.+....++.++++.+.+.+.+..|- .+.|++.++.+++.++...+++|
T Consensus 115 ~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~f~~~~~~~~~~~~~~~~~~~ 178 (377)
T TIGR00890 115 TAVKWFPD---KRGLASGIIIGGYGLGSFILSPLITSVINLEGV--PAAFIYMGIIFLLVIVLGAFLIG 178 (377)
T ss_pred HHHHHcCc---ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHHHHHhee
Confidence 56666664 479999999999989887766555555544432 35688888877777666655554
No 173
>PRK03699 putative transporter; Provisional
Probab=98.18 E-value=6.9e-06 Score=83.61 Aligned_cols=129 Identities=12% Similarity=-0.034 Sum_probs=87.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+...+.+++.+++.||+|||+++..+.++++++.+.+.+.. +.+ ...+...+.|+. ...+...+++.
T Consensus 49 s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~----~~~---~~~~~~~l~G~~~g~~~~~~~~~i~ 121 (394)
T PRK03699 49 TFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSH----SLA---LFSIAMFVLGVVSGITMSIGTFLIT 121 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcc----hHH---HHHHHHHHHHHhhHhhccchhHHhh
Confidence 345666777788999999999999999999888888776665543 211 122223345544 33444567788
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhcccccccc-ccCcchhHHHHHHHHHHHHHHhhh
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL-FGGGNIPAFVLASLSALAGGVVAT 426 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~-~g~~~~~~f~~~~v~~ll~~~~~~ 426 (445)
+..|++ ++|..++..+....++.++++.+.+.+.+. .|- .+.|.+.+++.++..++..
T Consensus 122 ~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw--~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 122 HVYEGK--QRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW--YWVYACIGLVYVAIFILTL 180 (394)
T ss_pred hhcccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH--HHHHHHHHHHHHHHHHHHH
Confidence 988764 578888998888888888888887776543 332 3567766666665554443
No 174
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.18 E-value=6.8e-06 Score=86.11 Aligned_cols=131 Identities=13% Similarity=-0.013 Sum_probs=82.9
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAEL 366 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~ 366 (445)
.+.+...+..++.+++.||+|||++...+.++.+++++.+++.. +.+ ...+...+.|++ .........+++.
T Consensus 79 ~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~----s~~---~l~~~r~l~G~~~~~~~~~~~~i~~~ 151 (476)
T PLN00028 79 ASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS----SAT---GFIAVRFFIGFSLATFVSCQYWMSTM 151 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc----CHH---HHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 44455566778999999999999999998888888776666553 211 111223345655 2222234567888
Q ss_pred hccCCCCcccchhHHHHHHHHHHHHhhhcccccccc---------ccCcchhHHHHHHHHHHHHHHhhheec
Q 013336 367 TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL---------FGGGNIPAFVLASLSALAGGVVATLKL 429 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~---------~g~~~~~~f~~~~v~~ll~~~~~~~~v 429 (445)
.|++ .+|+.+|+.+....++-.+++.+.+.+... .| -.++|++.++++++.+++..++.
T Consensus 152 ~~~~--~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~g--Wr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 152 FNGK--IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTA--WRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred cChh--heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh--hHHHHHHHHHHHHHHHHHHHHHc
Confidence 8875 578899998876666665555544433221 12 24578888887777666555443
No 175
>PRK09952 shikimate transporter; Provisional
Probab=98.16 E-value=1e-05 Score=83.73 Aligned_cols=137 Identities=7% Similarity=0.064 Sum_probs=88.0
Q ss_pred HHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCc-ceeeeccccccc--eecchhHHHhhhhh
Q 013336 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGG-IEHGIGANQAIK--ITYSVPFAITAELT 367 (445)
Q Consensus 291 i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gi~--~~~svP~aLls~~~ 367 (445)
+...+.+++.|++.||+|||+.+.++.++++++.+.+++.+.+....++.. ..++.-.+.|++ .....-.++++|..
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 154 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA 154 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC
Confidence 345566788999999999999999999999998877777652210000000 011123346665 33333357889999
Q ss_pred ccCCCCcccchhHHHHHHHHHHHHhhhcccccccc--------ccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 368 ADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL--------FGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 368 ~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~--------~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
|++ ++|+.++..+....++.++++.+...+... .| . ...|+++++..+++ +.....+||+
T Consensus 155 p~~--~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~g-W-r~~f~~~~~~~l~~-~~l~~~~~es 222 (438)
T PRK09952 155 PKN--KKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWG-W-RIPFLFSIVLVLIA-LWVRNGMEES 222 (438)
T ss_pred CCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccC-h-HHHHHHHHHHHHHH-HHHHHhCCCC
Confidence 986 578889999999888888887655544322 22 1 34677777766553 3344556775
No 176
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.15 E-value=5.7e-06 Score=83.46 Aligned_cols=143 Identities=17% Similarity=0.190 Sum_probs=113.1
Q ss_pred HHhhHHHHHHH--HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-
Q 013336 277 QGVREGAFGLL--LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK- 353 (445)
Q Consensus 277 ~gv~~g~~~l~--~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~- 353 (445)
-++..+..|.+ .|+...++.+.++..+.+|+.||+++.....+|.++-+..++.+. +. ..++.-.+.|+.
T Consensus 43 l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~-----f~--~Ll~aR~~~g~a~ 115 (394)
T COG2814 43 LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPS-----FA--VLLLARALAGLAH 115 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhcc-----HH--HHHHHHHHHHHHH
Confidence 34444334443 689999999999999999999999999999999998887777652 21 122223456655
Q ss_pred -eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 354 -ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 354 -~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
.+.++-.++..+..|++ ++|+.+|+.+.-..++++++..++..+-+.+|= ...|..-+++++++.+..++.+|
T Consensus 116 G~f~~i~~~~a~~lvpp~--~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW--R~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 116 GVFWSIAAALAARLVPPG--KRGRALALVFTGLTLATVLGVPLGTFLGQLFGW--RATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHcCcc--chhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHHhCC
Confidence 56677788899999997 678889999999999999998888888888873 46799999999999888888899
No 177
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.15 E-value=1.1e-05 Score=84.75 Aligned_cols=138 Identities=12% Similarity=0.065 Sum_probs=90.1
Q ss_pred HHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccc-cccCCcceeeeccccccc--eecchhHHHhhhh
Q 013336 290 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISV-REYSGGIEHGIGANQAIK--ITYSVPFAITAEL 366 (445)
Q Consensus 290 ~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~ 366 (445)
-+...+.+++.|++.||+|||+++.++.++++++.+++++.+.+.. ..+......+.-.+.|++ ...+...++++|.
T Consensus 67 ~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~ 146 (490)
T PRK10642 67 FLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEY 146 (490)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHh
Confidence 3455677889999999999999999999999998887777652210 000000011223346665 4445557889999
Q ss_pred hccCCCCcccchhHHHHHHHHHHHHhhhccccccc--------cccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 367 TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA--------LFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~--------~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
.|++ ++|...++.+....++.++++.+...+.. ..| . .+.|+++++..+++ ++.+..+||+
T Consensus 147 ~p~~--~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~g-W-R~~f~i~~~~~l~~-~~~~~~~~es 215 (490)
T PRK10642 147 SPDR--KRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWG-W-RIPFFIALPLGIIG-LYLRHALEET 215 (490)
T ss_pred CCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCcc-H-HHHHHHHHHHHHHH-HHHHHcCCCC
Confidence 9986 57888899888877887777655433322 222 2 45687877666654 3345677875
No 178
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.14 E-value=5.7e-06 Score=86.18 Aligned_cols=130 Identities=13% Similarity=0.025 Sum_probs=89.1
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-ccccccc--eecchhHHHhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~--~~~svP~aLls 364 (445)
.+.+...+...+.++++||+|||++++.+.++++++++..++.. +.+. .... ..+.|++ .......+++.
T Consensus 62 ~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~----~~~~---l~~~~~~l~G~~~~~~~~~~~~~~~ 134 (455)
T TIGR00892 62 IMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSS----NVIE---LYLTAGFITGLGLAFNFQPSLTMLG 134 (455)
T ss_pred HHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhh----hHHH---HHHHHHHHHHhcchhhhhHHHHHHH
Confidence 33444456677889999999999999999888887776655543 2211 1111 1334555 22233467778
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheec
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 429 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~v 429 (445)
+..++ ++|+.+|+.+....++..+++.+.+.+.+..|- .+.|++.+++.+++.++..+..
T Consensus 135 ~~~~~---~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gw--r~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 135 KYFYR---RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGW--RGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHHHh---hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHhC
Confidence 88863 579999999999999999999988888877663 4578887777766655444333
No 179
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.14 E-value=1.5e-05 Score=82.31 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=91.4
Q ss_pred HHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccc-cccCCcceeeeccccccc--eecchhHHHhhhhh
Q 013336 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISV-REYSGGIEHGIGANQAIK--ITYSVPFAITAELT 367 (445)
Q Consensus 291 i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~ 367 (445)
+...+.+++.|++.||+|||+.+..+.++++++.+.+++.+.+.. ..+......+.-.+.|++ .......++++|..
T Consensus 74 ~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~ 153 (432)
T PRK10406 74 LMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVA 153 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhC
Confidence 344577889999999999999999999999988777666542100 000000012223356665 44556678999999
Q ss_pred ccCCCCcccchhHHHHHHHHHHHHhhhccccccc--------cccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 368 ADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA--------LFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 368 ~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~--------~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
|++ ++|+..++.+.....+.++++.+...+.. ..| -...|+++++.+++..+ .+..+||++
T Consensus 154 p~~--~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g--Wr~~F~i~~~~~ll~~~-~~~~~~e~~ 222 (432)
T PRK10406 154 VEG--RKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWG--WRIPFALGAVLAVVALW-LRRQLDETS 222 (432)
T ss_pred CCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccc--hHHHHHHHHHHHHHHHH-HHhcCCCCc
Confidence 985 57888899888888888887765443322 222 24578888887776543 445677753
No 180
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.12 E-value=3.3e-05 Score=77.29 Aligned_cols=55 Identities=18% Similarity=0.262 Sum_probs=49.4
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhcccccc
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG 96 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~ 96 (445)
.+..++..++...++....|+.+.-|++....=+++.+.+.++|+++|+++|+.+
T Consensus 109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 109 VALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred HHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 5567788888889999999999999998888889999999999999999999864
No 181
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.07 E-value=7.1e-06 Score=86.45 Aligned_cols=139 Identities=12% Similarity=0.018 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccc--cCCcceeeeccccccc--eecchhHHH
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVRE--YSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
..+.+...+.+++.+++.||+|||+.+.++.++++++.+.+++..... +. +. ..++...+.|++ .......++
T Consensus 63 ~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~--~~~~~r~l~G~~~g~~~~~~~~~ 139 (502)
T TIGR00887 63 GSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSS-PKSVMA--TLCFWRFWLGVGIGGDYPLSAII 139 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcc-cchHHH--HHHHHHHHHHHHHhhhhHHHHHH
Confidence 345667778899999999999999999999888888766555543100 00 00 112223345655 445666789
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccc---------------------c-CcchhHHHHHHHHHHH
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF---------------------G-GGNIPAFVLASLSALA 420 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~---------------------g-~~~~~~f~~~~v~~ll 420 (445)
++|..|++ .+|+.+++.+.+..+++++++.+...+.... . +. ...|.++++.+++
T Consensus 140 ~~e~~p~~--~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W-R~~~~~~~ip~~i 216 (502)
T TIGR00887 140 TSEFATKK--WRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMW-RILIGFGAVPALL 216 (502)
T ss_pred HHHhcChh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccH-HHHHHHHHHHHHH
Confidence 99999986 6799999999999999999887765443211 0 11 3356666666665
Q ss_pred HHHhhheeccCC
Q 013336 421 GGVVATLKLPHL 432 (445)
Q Consensus 421 ~~~~~~~~vpe~ 432 (445)
..++ .+++||+
T Consensus 217 ~~~~-~~~lpES 227 (502)
T TIGR00887 217 ALYF-RLTIPET 227 (502)
T ss_pred HHHH-HHhCCCC
Confidence 5443 4688996
No 182
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.07 E-value=6.6e-05 Score=74.23 Aligned_cols=262 Identities=11% Similarity=0.046 Sum_probs=159.5
Q ss_pred hhhHHHHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccc
Q 013336 37 AFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGN 116 (445)
Q Consensus 37 i~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~ 116 (445)
......|..+...++...+.-.+++|=...|+ +-+...+.++...++|+.++..+.-- +.+.+ .+
T Consensus 99 ~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavp--la~~~------------~g 163 (395)
T COG2807 99 LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVP--LAQHS------------GG 163 (395)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhH--HHHhh------------cc
Confidence 34556888888999988888888988888754 45889999999999999999876532 33221 35
Q ss_pred hhHHHHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhh
Q 013336 117 LKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLK 196 (445)
Q Consensus 117 ~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (445)
||....+-+.+.+++++ .+.|.... +...+. +
T Consensus 164 W~~aL~~WAl~allAl~---~WlPq~~r-~~~~~~---~----------------------------------------- 195 (395)
T COG2807 164 WRGALGFWALLALLALL---IWLPQALR-EQAASI---A----------------------------------------- 195 (395)
T ss_pred HHHHHHHHHHHHHHHHH---HHhhhccc-cccccc---c-----------------------------------------
Confidence 88888887777666654 45665311 100000 0
Q ss_pred hccccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHH
Q 013336 197 HISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYD 276 (445)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~ 276 (445)
.+..+-+.+|++ |. -+++-+-.-++.+.++..+...+.++.|. |-. .-+
T Consensus 196 ---------------~~~~~~~~vw~~----~~-aW~vtLfmGlqS~~~Y~~~~WLP~ili~~---G~s--------a~~ 244 (395)
T COG2807 196 ---------------TKLVSVRKVWRS----PL-AWQVTLFMGLQSLLYYIVIGWLPAILIDR---GLS--------AAE 244 (395)
T ss_pred ---------------cccccccccccC----ch-hHHHHHHHHhhHHHHHHHHHHHHHHHHHc---CCC--------HHH
Confidence 000011112222 32 24444444445555555555566554431 210 001
Q ss_pred HHhhHHHHHHHHHHHHHHHHhhhhhhhhhhc-CchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeecccccccee
Q 013336 277 QGVREGAFGLLLNSVVLGVSSFLIEPMCRWI-GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKIT 355 (445)
Q Consensus 277 ~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~-g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~ 355 (445)
.| +.+.+..+..+..++..|.+.+|. ++|++.+...+.+.++++++.+.+. +. ...|..++|++.-
T Consensus 245 aG-----~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~---~~-----~~lw~~llG~G~G 311 (395)
T COG2807 245 AG-----SLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG---QL-----PILWALLLGLGQG 311 (395)
T ss_pred hh-----hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh---hH-----HHHHHHHHhCccc
Confidence 12 233355677888899999999865 6777777788888888777666542 21 2234455777633
Q ss_pred cchhHHH--hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCc
Q 013336 356 YSVPFAI--TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG 406 (445)
Q Consensus 356 ~svP~aL--ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~ 406 (445)
.+.|.+| +....++. +..+.--|+.+..-|+=--.+|.+.|.+.|..|+.
T Consensus 312 ~~F~laL~li~~rs~~a-~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw 363 (395)
T COG2807 312 GAFPLALTLILLRSSDA-AIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSW 363 (395)
T ss_pred hHHHHHHHHHHhhcCCh-HHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCCh
Confidence 3445444 34433333 45666677777777777778899999999999865
No 183
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.04 E-value=8.1e-06 Score=84.95 Aligned_cols=136 Identities=7% Similarity=-0.074 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+...+..++.+++.||+|+|+.+.++.++.+++.+.+.+... +.+. ..++...+.|++ .....-.++++
T Consensus 83 s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~---~~~~--~l~~~r~~~G~~~~~~~~~~~~~~~ 157 (465)
T TIGR00894 83 SSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG---GGIA--LVVFCRVIQGLAQGSVSPATHKIIV 157 (465)
T ss_pred HHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH---cCch--HHHHHHHHHHHhcccchhhHHHHHH
Confidence 3566777788999999999999999999988887776655433321 1110 112223346655 44444567889
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccc-cCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF-GGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~-g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
+..|++ ++|+.+|+.+....+++++++.+.+.+.+.. |- ...|++.++..++..++.+++.||
T Consensus 158 ~~~~~~--~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw--~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 158 KWAPPK--ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGW--PMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred hcCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--CeehhhhhHHHHHHHHHHHHHhcC
Confidence 999875 5799999999999999999999998887763 53 346888888777666655555544
No 184
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.03 E-value=1.1e-05 Score=80.57 Aligned_cols=130 Identities=14% Similarity=0.089 Sum_probs=84.8
Q ss_pred hhhhhhhhhhc-----CchhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-e-ecchhHHHhhhhhc
Q 013336 297 SFLIEPMCRWI-----GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-I-TYSVPFAITAELTA 368 (445)
Q Consensus 297 s~i~~~l~~r~-----g~r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~-~~svP~aLls~~~~ 368 (445)
.++.++++||+ ||||.++ .+.+..+++++.+++..... +.+ .......+.++. . ....-.+++.|..|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~-~l~---~l~~~~~~~~~~~~~~~~~~~a~~~~~~~ 113 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST-DLP---LLAGLAFLIAFFSATQDIALDAWRLEILS 113 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch-hHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 77888999997 8999865 57777777665555442110 110 011111122222 2 22223678899997
Q ss_pred cCCCCcccchhHHHHHHHHHHHHhhhccccccccccCc------chhHHHHHHHHHHHHHHhhheeccCC
Q 013336 369 DSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG------NIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 369 ~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~------~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
++ ++|...|+......+++++++.+++.+.+..|.+ ....|++.++..+++.+..++..||.
T Consensus 114 ~~--~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 114 DE--ELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred Hh--hhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 75 5788899999999999999999988877766521 13568888888777766555556764
No 185
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.02 E-value=2.5e-05 Score=81.06 Aligned_cols=142 Identities=17% Similarity=0.083 Sum_probs=88.9
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAEL 366 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~ 366 (445)
++.++..+.-++.+++.||+|.|++..++.++.++..+.+++......+.+. ..+++..+.|++ .........+++.
T Consensus 78 i~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~--~lli~r~l~Gigg~~f~~~~~~vs~w 155 (462)
T PRK15034 78 LPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFG--IFIVIALLCGFAGANFASSMGNISFF 155 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHH--HHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4555666677788999999999999999999988887776664100001121 122234456665 4445557778999
Q ss_pred hccCCCCcccchhHH----HHHHHHHHHHhhhccc-cccccccCcc-----------hhHHHHHHHHHHHHHHhhheecc
Q 013336 367 TADSGGGQGLAIGVL----NLAIVIPQMIVSLGAG-PWDALFGGGN-----------IPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~----n~~~~l~qii~~~~~g-~l~~~~g~~~-----------~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
+|++ ++|+.+|+. |....+.|+++|.+.+ .+.+.+|... ..+.++.+++.++++++.+++.+
T Consensus 156 fp~~--~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 156 FPKA--KQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred CCHh--HhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9886 579989988 7777777787776543 2323222210 11234555555666666666666
Q ss_pred CCC
Q 013336 431 HLS 433 (445)
Q Consensus 431 e~~ 433 (445)
+.+
T Consensus 234 ~~~ 236 (462)
T PRK15034 234 DIA 236 (462)
T ss_pred Ccc
Confidence 544
No 186
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.00 E-value=2.2e-05 Score=78.67 Aligned_cols=135 Identities=10% Similarity=0.043 Sum_probs=85.4
Q ss_pred HHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccc-cCCcceeeeccccccc--eecchhHHHhhhhhcc
Q 013336 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVRE-YSGGIEHGIGANQAIK--ITYSVPFAITAELTAD 369 (445)
Q Consensus 293 ~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~ 369 (445)
..+.+++.+++.||+|||+++.++.++++++.+..++...+.... +......+...+.|++ .......++++|..|+
T Consensus 48 ~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 127 (394)
T TIGR00883 48 RPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPP 127 (394)
T ss_pred hhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCc
Confidence 346688899999999999999999999988877666554211000 0000011122345554 3334445788999987
Q ss_pred CCCCcccchhHHHHHHHHHHHHhhhccccccc--------cccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 370 SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA--------LFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 370 ~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~--------~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
+ ++|+.+++.+....++.++++.+.+.+.. ..| ....|.+.+++.+++.+ .....||+
T Consensus 128 ~--~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~--w~~~~~~~~~~~~~~~~-~~~~~~~~ 193 (394)
T TIGR00883 128 G--KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWG--WRIPFLVSAVLVLIGLY-LRRNLEET 193 (394)
T ss_pred c--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccc--hHHHHHHHHHHHHHHHH-HHHhcCCC
Confidence 5 57999999999999999999887655432 122 13456666666555443 33445554
No 187
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.94 E-value=5e-05 Score=72.56 Aligned_cols=176 Identities=18% Similarity=0.268 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
++++.+.++.++-..+|++|..--+.+..+ -|+-+|.+ .+.+--.+|.+ +++.+.+.+.++||.|
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg~~fF~~-rfGlS~~~-------------a~~i~s~vy~I-sav~spvfg~i~Dk~G 328 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLGPMFFQK-RFGLSAVS-------------AGNILSTVYGI-SAVLSPVFGAISDKYG 328 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hhCCChhh-------------ccchhhhhhhh-hhhhhhhHHHhHhhhc
Confidence 456666555566666777776666655554 45544321 11111223333 4556778889999999
Q ss_pred chhhHHHHHHHHHHH-HHHHHHhhhccccccCCcceeeeccccccc-eecch-hHHHhhhhhccCCCCcccchhHHHHHH
Q 013336 309 SRLVWAISNFIVFAC-MATTAIISVISVREYSGGIEHGIGANQAIK-ITYSV-PFAITAELTADSGGGQGLAIGVLNLAI 385 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~sv-P~aLls~~~~~~~~~~G~~~gi~n~~~ 385 (445)
++.+|+.+..+..+. ..+..| ++. +.| ..+ .+.|.. .+..+ -|-+++.+.|++ .-|+.+|..++-.
T Consensus 329 ~n~~wv~~a~~~tl~~H~~l~F-t~l--sPy---~~m---~~lGLsysllAcslWP~va~~vpE~--qLGTaygf~qsIq 397 (459)
T KOG4686|consen 329 FNLWWVASACILTLLGHSGLFF-TFL--SPY---TSM---TFLGLSYSLLACSLWPCVASLVPEE--QLGTAYGFIQSIQ 397 (459)
T ss_pred ceehhHHHHHHHHHHHhhhHHh-hhc--cHH---HHH---HHHhhhHHHHHHHHhhhhhhhCCHH--HhcchHHHHHHHH
Confidence 999999865444432 222222 211 333 233 234444 22222 356677788875 5799999999999
Q ss_pred HHHHHHhhhccccccccccCc-chhH-HHHHHHHHHHHHHhhheeccC
Q 013336 386 VIPQMIVSLGAGPWDALFGGG-NIPA-FVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 386 ~l~qii~~~~~g~l~~~~g~~-~~~~-f~~~~v~~ll~~~~~~~~vpe 431 (445)
.++-.+.+.+.|.+.|.-|+. +.-+ |...+.+++++.... +.+.+
T Consensus 398 NLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil-~~~N~ 444 (459)
T KOG4686|consen 398 NLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGIL-FYLNK 444 (459)
T ss_pred hhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHH-hheec
Confidence 999999999999999887743 2222 445566666665544 34433
No 188
>PRK15075 citrate-proton symporter; Provisional
Probab=97.94 E-value=7.1e-05 Score=77.29 Aligned_cols=133 Identities=11% Similarity=0.006 Sum_probs=81.3
Q ss_pred HHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccc--cCCcceeeeccccccc--eecchhHHHhhhhhcc
Q 013336 294 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVRE--YSGGIEHGIGANQAIK--ITYSVPFAITAELTAD 369 (445)
Q Consensus 294 ~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~ 369 (445)
.+.+++.+++.||+|||++++.+.++++++.+.+++...+. .. +......+...+.|++ .....-.++++|..|+
T Consensus 70 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 148 (434)
T PRK15075 70 PLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYA-TIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP 148 (434)
T ss_pred hhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHH-HHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc
Confidence 35678889999999999999999999988877766654210 00 0000012223346655 2233334789999998
Q ss_pred CCCCcccchhHHHHHHHHHHHHhhhcccccc--------ccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 370 SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD--------ALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 370 ~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~--------~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
+ .+|+.+++.+....++.++++.+++.+. +..| ..+.|+++.+..+ ..++.....||+
T Consensus 149 ~--~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~g--Wr~~f~~~~~~~~-~~~~~~~~~~e~ 214 (434)
T PRK15075 149 G--RKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWG--WRIPFLIGCLIVP-FIFLIRRSLEET 214 (434)
T ss_pred c--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccc--hHHHHHHHHHHHH-HHHHHHHhcCCC
Confidence 6 6799999998888887777766655442 2233 2346666544332 222233455665
No 189
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.90 E-value=4.9e-05 Score=78.12 Aligned_cols=110 Identities=5% Similarity=-0.199 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
....+.+...+.+++.+++.||+|||++..+|.++++++.+........ +.+. ...+...+.|++ ...+.-.+.
T Consensus 43 l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~--~~~~--~~l~~~~l~G~g~g~~~~~~~~~ 118 (410)
T TIGR00885 43 VQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI--MNYT--LFLVGLFILTAGLGFLETAANPY 118 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh--ccHH--HHHHHHHHHHhhHHHHHhhhhHH
Confidence 3345667778889999999999999999999999999887654333211 1121 112223345554 322222344
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccc
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 400 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~ 400 (445)
+.+..|++ .+++.+++.+....++..+++.+.+.+.
T Consensus 119 ~~~~~~~~--~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 119 ILVMGPES--TATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHCCHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666664 5688899999999999999999888764
No 190
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.89 E-value=3.9e-05 Score=80.74 Aligned_cols=130 Identities=13% Similarity=0.119 Sum_probs=85.5
Q ss_pred HHhhhhhhhhhhc-----CchhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eec-chhHHHhhhh
Q 013336 295 VSSFLIEPMCRWI-----GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITY-SVPFAITAEL 366 (445)
Q Consensus 295 i~s~i~~~l~~r~-----g~r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~-svP~aLls~~ 366 (445)
+..++.++++||+ |||+.|+ .+.+..++++..+++.... +... ...+...+.++. ... ..-.+++.|.
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~--~~l~--~l~~~~~l~~~~~a~~~i~~~a~~~~~ 135 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPG--TQLR--WLAALAVVIAFCSASQDIVFDAWKTDV 135 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCc--chHH--HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4578889999999 9998766 6777777766665554211 1110 111122233433 222 2335888999
Q ss_pred hccCCCCcccchhHHHHHHHHHHHHhhhccccccc-cccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 367 TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA-LFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~-~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
.|++ ++|+..|+.+....++.++++.+.+.+.+ ..|- ...|++.+++.++..+... ++||+.
T Consensus 136 ~~~~--~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW--r~~f~i~a~l~ll~~l~~~-~~~e~~ 198 (491)
T PRK11010 136 LPAE--ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW--QGMYWLMAALLIPCIIATL-LAPEPT 198 (491)
T ss_pred cChh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH--HHHHHHHHHHHHHHHHHHH-hcCCCc
Confidence 9875 57888999999999999999988888776 3342 4568787777777655443 467753
No 191
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.87 E-value=5.6e-05 Score=76.10 Aligned_cols=133 Identities=14% Similarity=0.058 Sum_probs=97.3
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchh-HHHhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVP-FAITAE 365 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP-~aLls~ 365 (445)
.+.++-.+.=+++|.++||.+.|+...+|+++.+++.+.+++..+. + +..++..+-|.. .+.+=| ...+++
T Consensus 72 ~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~----~---~~~~l~~lng~fQg~Gwpp~~~~i~~ 144 (448)
T COG2271 72 AFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSL----F---LFAVLWVLNGWFQGMGWPPCARTITH 144 (448)
T ss_pred HHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHH----H---HHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3455555667889999999999999999999999998888776522 1 111222223332 222333 577888
Q ss_pred hhccCCCCcccchhHHHHHHHHHHHHhhhcc--ccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 366 LTADSGGGQGLAIGVLNLAIVIPQMIVSLGA--GPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 366 ~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~--g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
..+++ +||+..++.|++..++-.+.+.+. +.+....+- ...|++.|+++++-++++++..++
T Consensus 145 Wfsr~--eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w--~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 145 WFSRK--ERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGW--RAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred HcCcc--ccCceEEEehhhhhcccchHHHHHHHHHHHhccch--hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99886 579999999999999999998887 666655432 457999999999988888776644
No 192
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.86 E-value=1.9e-05 Score=81.00 Aligned_cols=185 Identities=14% Similarity=0.117 Sum_probs=114.8
Q ss_pred ccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 013336 225 RHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMC 304 (445)
Q Consensus 225 ~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~ 304 (445)
.+-|+.+..+..++++--++++.+.--+..|+....-.+ . .+++.-..+..+ .|+...-++.++.|+++
T Consensus 17 f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g---L------g~~~~~A~~l~~--~y~slVY~t~i~GG~la 85 (498)
T COG3104 17 FGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG---L------GFDETHATGLFS--AYGSLVYLTPIIGGWLA 85 (498)
T ss_pred CCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc---C------CcChHhhHHHHH--HHHHHHHHHHHHHHHHH
Confidence 445999999999999888877765444444432211111 0 011111111111 23334445688899999
Q ss_pred hhc-CchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccceecchhHHHhhhhhccCCCCcccchhHHHH
Q 013336 305 RWI-GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKITYSVPFAITAELTADSGGGQGLAIGVLNL 383 (445)
Q Consensus 305 ~r~-g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~svP~aLls~~~~~~~~~~G~~~gi~n~ 383 (445)
||+ |+|+..++|.++++++.+.++..+.. .....++.++++. +|-+..-+-+-++++|.+|+++.++-..++++..
T Consensus 86 Dr~LG~~~tI~lGail~~iGh~~L~~~~~~--~~~gl~i~L~~I~-iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~ 162 (498)
T COG3104 86 DRVLGTRRTIVLGAILMAIGHLVLAISSVS--GPGGLYIGLALII-VGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYM 162 (498)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHhccccc--cccHHHHHHHHHH-hccccccccHHHHHHHhcCCCCcccCCCccEEEE
Confidence 996 99999999999999998876654201 1110011121111 3333444556689999998764334444677777
Q ss_pred HHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 384 AIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 384 ~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
.+.++-+++|++.+.+.+..|.+ ..|.++++-..++.+..
T Consensus 163 ~iNiGsl~~p~i~~~~~~~~g~~--~gF~~aavGm~~gl~~f 202 (498)
T COG3104 163 GINIGSLIAPIITGLLAINYGWH--VGFGLAAVGMIIGLVIF 202 (498)
T ss_pred EeehHHHHHHHHHHHHHHhhCHH--HHHHHHHHHHHHHHHHH
Confidence 78899999999999988877743 46888887766665543
No 193
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.85 E-value=6.4e-05 Score=80.08 Aligned_cols=152 Identities=12% Similarity=0.051 Sum_probs=80.7
Q ss_pred CHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 013336 228 PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI 307 (445)
Q Consensus 228 P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~ 307 (445)
+|.+...+++.|+.-+-+++...|.+..+.. +|+.||... .+ .+ +....+++.....+.+.+.+.+++
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~-vf~~d~~~~------~~----~~-~~s~~~~fg~~~g~~i~g~l~~~i 376 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVN-VFGSDPISI------TE----IG-WISSPVGFGSCAGAVILGLLFSKI 376 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hccCCCccc------ce----ee-hhhhhHHHHHHHHHHHHHHHHHHc
Confidence 4556555667777666677777777766654 787665310 01 11 111233444445567788888888
Q ss_pred CchhhH-HHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhhhccCCCCcccchhHHHHHH
Q 013336 308 GSRLVW-AISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAELTADSGGGQGLAIGVLNLAI 385 (445)
Q Consensus 308 g~r~l~-~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~ 385 (445)
++-|.. +++.+.+.+++.+++.+. +.|... ......+.|++ .....|-..+.++.-++ +..|+..|+.-+..
T Consensus 377 r~~Kw~li~~~~~~ta~~Gama~~~--~~n~~~---~i~~~~l~g~giG~~~~~~~~~~ql~~p~-~~ig~a~gL~~s~R 450 (599)
T PF06609_consen 377 RHIKWQLIFGSVLMTAFCGAMAAVR--PDNKNA---AIAFLVLAGFGIGGILVPAIVIAQLIVPD-EDIGTATGLTGSIR 450 (599)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHcc--CCCcch---HHHHHHHHHHhHHHHHHHHHHeeEeeeCc-hHHHHHHHHHHHHH
Confidence 765555 467777776555544443 212211 11222233333 11122223334444332 36788778777777
Q ss_pred HHHHHHhhhccc
Q 013336 386 VIPQMIVSLGAG 397 (445)
Q Consensus 386 ~l~qii~~~~~g 397 (445)
.++.-++..++.
T Consensus 451 ~~GGsIg~aIy~ 462 (599)
T PF06609_consen 451 SIGGSIGYAIYN 462 (599)
T ss_pred HHhhHHHHHHHH
Confidence 777766655553
No 194
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.83 E-value=4e-05 Score=78.24 Aligned_cols=132 Identities=18% Similarity=0.093 Sum_probs=85.0
Q ss_pred HHHhhhhhhhhhhc-----Cchh-hHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhh
Q 013336 294 GVSSFLIEPMCRWI-----GSRL-VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAE 365 (445)
Q Consensus 294 ~i~s~i~~~l~~r~-----g~r~-l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~ 365 (445)
.+..++.++++||+ |||| +.+++.+++++++..+++..... +.+ ...++..+.++. .....-.+++.|
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~-~~~---~l~~~~~~~~~~~~~~~~~~~al~~~ 121 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHA-ALW---PLAGLAVLVAFLSASQDIVFDAYSTD 121 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccc-hHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999 8876 45568888888777665542110 111 111111223322 222333688899
Q ss_pred hhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 366 LTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 366 ~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
..|++ ++|+..++......+++++++.+.+.+.+...+. ...|++.+++.++..+. .+++||++
T Consensus 122 ~~~~~--~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw-~~~f~i~a~~~l~~~l~-~~~~~e~~ 185 (402)
T PRK11902 122 VLHPE--ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGW-GNTYLLMAGLMLAGALT-TLWAPEPE 185 (402)
T ss_pred hcChh--hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCH-HHHHHHHHHHHHHHHHH-HHhcCCCc
Confidence 98875 5799999999999999999988887777643222 45677777776665553 45667653
No 195
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.82 E-value=4.8e-05 Score=76.05 Aligned_cols=127 Identities=16% Similarity=0.094 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFA 361 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~a 361 (445)
+....+.+...+.+++.+++.||+|+|+...++.+..+++.+.. ... +.+ ..++...+.|++ .....-.+
T Consensus 39 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~----~~~---~l~~~~~~~g~g~~~~~~~~~~ 110 (355)
T TIGR00896 39 LLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP----GTA---LLFAGTALIGVGIAIINVLLPS 110 (355)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc----cHH---HHHHHHHHHHHHHHHHhccchH
Confidence 34446677778889999999999999999999887777665443 211 221 122223334544 22222235
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHH
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAG 421 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~ 421 (445)
++.+..|+ ++|+.+|+.+....+++.+++.+.+.+.+..+..-...|...++..+++
T Consensus 111 ~~~~~~~~---~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 111 LIKRDFPQ---RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHhCcc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 66776653 4799999999999999999998888877654321123455444444433
No 196
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.80 E-value=2e-05 Score=80.90 Aligned_cols=148 Identities=10% Similarity=0.075 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh----cCchhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecc
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRW----IGSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYS 357 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r----~g~r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~s 357 (445)
+.+.+..+..++...+.|+++|| +||||.++ ++.+.++++++.+...+... .........++..+.++. ....
T Consensus 39 ~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 117 (437)
T TIGR00792 39 TLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFS-ATGKLVYAYITYILLGLFYSFVN 117 (437)
T ss_pred HHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCC-cchHHHHHHHHHHHHHHHHHhhc
Confidence 34446677788889999999998 67877666 57777777666554432110 000000001111223333 3345
Q ss_pred hhH-HHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccC-----cchhHHHHHHHHHHHHHHhhheeccC
Q 013336 358 VPF-AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG-----GNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 358 vP~-aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~-----~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
+|+ ++..+..+++ +++++..++.+....++.++++.+.+++....+. .....+.+.++++++..+++.+.+||
T Consensus 118 ~~~~al~~~~~~~~-~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e 196 (437)
T TIGR00792 118 IPYWSLVPAITLDP-RERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKE 196 (437)
T ss_pred ccHhhCcccccCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEe
Confidence 674 6666666543 3578888999999999988888777766543331 11234666777777776666677777
Q ss_pred CC
Q 013336 432 LS 433 (445)
Q Consensus 432 ~~ 433 (445)
.+
T Consensus 197 ~~ 198 (437)
T TIGR00792 197 RY 198 (437)
T ss_pred cC
Confidence 54
No 197
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.79 E-value=0.00026 Score=76.38 Aligned_cols=66 Identities=17% Similarity=0.234 Sum_probs=59.3
Q ss_pred CCcceehhhHHHHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhcccccc
Q 013336 31 GTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG 96 (445)
Q Consensus 31 ~~~~~~i~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~ 96 (445)
..+.+..++.++|-.+..++.-..++.--.||-|.+.+++-..-.++...+..+|-++||++|++.
T Consensus 231 ~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~ 296 (735)
T KOG3626|consen 231 ESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFC 296 (735)
T ss_pred cCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 344445578889999999999999999999999999999999999999999999999999999974
No 198
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.77 E-value=0.00023 Score=74.61 Aligned_cols=67 Identities=18% Similarity=0.180 Sum_probs=51.5
Q ss_pred chhhHHHHhcCCCcc--chhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHH
Q 013336 55 QGPARALLADLSGPD--QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (445)
Q Consensus 55 ~~p~~A~i~D~~p~~--qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~ 132 (445)
.+...++++|..|++ +|.++.++.....++|+.+++.+++. +.+. .++++.|.++++.+++++
T Consensus 118 ~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~--L~~~-------------~Gw~~~F~iaaigm~l~l 182 (493)
T PRK15462 118 KSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY--AQEE-------------YSWAMGFGLAAVGMIAGL 182 (493)
T ss_pred cccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH--HHhh-------------hChHHHHHHHHHHHHHHH
Confidence 344678999999975 68999999999999999999998876 2221 258899988877666665
Q ss_pred hhee
Q 013336 133 LVTI 136 (445)
Q Consensus 133 ~~t~ 136 (445)
+...
T Consensus 183 i~~~ 186 (493)
T PRK15462 183 VIFL 186 (493)
T ss_pred HHHH
Confidence 5443
No 199
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.70 E-value=6.2e-05 Score=79.63 Aligned_cols=133 Identities=17% Similarity=0.134 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
+..++-+...+.+++.+.++||+|||++++.+.++++++-+++++.. |-+ ..++.-.+.|+. ...++.+.+
T Consensus 123 ~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~----~~~---~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 123 GQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP----NYW---MFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred HHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC----cHH---HHHHHHHHHHhhccchhHHhHhh
Confidence 33445556667788999999999999999999999998877777765 321 123334456666 566778899
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
++|+++++ .|+..+.+ ....+.+-.+.+...+.+...+ .+.+++.++.+++..++ +++.||.
T Consensus 196 ~~E~~~~~--~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~W----r~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 196 VAEIVSPK--QRGLALTL-GGFFFVGGLMLPAGAAYITRDW----RWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred heeecCcc--hhhHHHHH-HHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHH-HHccCcC
Confidence 99999986 56777777 5555555566666566655521 45677777766666554 4555563
No 200
>PRK10133 L-fucose transporter; Provisional
Probab=97.68 E-value=0.00014 Score=75.34 Aligned_cols=109 Identities=7% Similarity=-0.145 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aL 362 (445)
.+..+.+...+.+++.+++.||+|||++...+.++++++.+........ +.+. ...+...+.|++ .......++
T Consensus 66 ~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a--~~~~--~ll~~r~l~G~g~g~~~~~~~~~ 141 (438)
T PRK10133 66 IQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEI--MNYT--LFLVGLFIIAAGLGCLETAANPF 141 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc--CCHH--HHHHHHHHHHHHHHHHHhhHHHH
Confidence 3346777888889999999999999999999999999887654221111 2221 122223456665 444444566
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccc
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPW 399 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l 399 (445)
+.+..|++ .++..+++.+....++..+++++++.+
T Consensus 142 v~~~~~~~--~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 142 VTVLGPES--SGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHhCChh--hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67654443 344468999999999999998876654
No 201
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.65 E-value=0.00014 Score=74.89 Aligned_cols=168 Identities=14% Similarity=0.105 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCc-h
Q 013336 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS-R 310 (445)
Q Consensus 232 ~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~-r 310 (445)
.+++...|+.|.++-....+.+.|+.++ ++-++ . +.| +.+..+.+..++.+.+.++++||+|+ |
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~s~----------~---~iG-l~~a~~~~~~~i~~~~~g~l~dr~g~~r 69 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSKT-LHFSG----------A---EIG-WVYSSTGIAAILMPILVGIIADKWLSAQ 69 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCH----------H---HHH-HHHHHHHHHHHHHHHHHHHHHHHhcccH
Confidence 4577777777777777777777777652 22221 1 233 33346677888899999999999965 6
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhc-------cCCCCcccchhHH
Q 013336 311 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTA-------DSGGGQGLAIGVL 381 (445)
Q Consensus 311 ~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~-------~~~~~~G~~~gi~ 381 (445)
++..++.+..++++....+.. +.+ .......+.|+. ....+-.++...+.. .+ .++.+.+|
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~-~~~~r~~G-- 139 (418)
T TIGR00889 70 KVYAVCHFAGALLLFFAAQVT----TPA---GMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTD-FPPIRVMG-- 139 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----CHH---HHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhc-CCCeeeeh--
Confidence 677777777766555444332 111 011122223332 111111122211211 11 13344445
Q ss_pred HHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 382 NLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 382 n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
.++..+++++.|.+ ...+. ...|++.++..++..+++ +++||+
T Consensus 140 ----~lG~~ig~~l~g~l-~~~~~--~~~f~~~~~~~~~~~~~~-~~~~e~ 182 (418)
T TIGR00889 140 ----TIGFIAAMWAVSLL-DIELS--NIQLYITAGSSALLGVFA-LTLPDI 182 (418)
T ss_pred ----hHHHHHHHHHHHHh-cccch--hHHHHHHHHHHHHHHHHH-hcCCCC
Confidence 36777888877766 22211 224667777777766654 577775
No 202
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.63 E-value=0.00037 Score=72.09 Aligned_cols=78 Identities=13% Similarity=0.187 Sum_probs=56.9
Q ss_pred hccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHH
Q 013336 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (445)
Q Consensus 48 d~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~ 127 (445)
.++-.... +...|+...+|+++|+++.++......+|.+++++++.. .. .+++ ..++.+.+++...
T Consensus 126 GvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql--l~-s~gW----------r~y~~Ln~Isl~s 191 (511)
T TIGR00806 126 SVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL--LV-TLGW----------ISYSTLNIISLVF 191 (511)
T ss_pred HHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-hcCc----------hhHHHHHHHHHHH
Confidence 33333344 788899999999999999999999999999999988875 21 1111 2466677787777
Q ss_pred HHHHHhheeeEee
Q 013336 128 LTLCALVTIYFAD 140 (445)
Q Consensus 128 ~~i~~~~t~~~v~ 140 (445)
..++++++++ +|
T Consensus 192 ~~~a~~~a~~-LP 203 (511)
T TIGR00806 192 MTFSVFLALF-LK 203 (511)
T ss_pred HHHHHHHHHh-CC
Confidence 7777776654 56
No 203
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.62 E-value=0.0002 Score=72.19 Aligned_cols=135 Identities=16% Similarity=0.170 Sum_probs=87.4
Q ss_pred HHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHH
Q 013336 236 IVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAI 315 (445)
Q Consensus 236 l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~ 315 (445)
.+.|..|+-+-+...+..+ -|+-++ ++ .+ +...+..++..+.-++.+.+.||+|-|+++++
T Consensus 24 ~v~F~VW~l~s~l~~~i~~-----~~~LS~-----~q--------~~-ll~aiPil~GallRl~~g~l~drfGgR~~~~~ 84 (417)
T COG2223 24 DVGFMVWTLFSPLGVFIKS-----DFGLSE-----GQ--------KG-LLVAIPILVGALLRLPYGFLTDRFGGRKWTIL 84 (417)
T ss_pred HHHHHHHHHHHHHHhhhcc-----ccCCCH-----HH--------HH-HHHHHHHHHhHHHHHHHHhhhcccCchHHHHH
Confidence 4677788888887777662 344332 11 11 12234556677778889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhhhccCCCCcccchhHHH---HHHHHHHHH
Q 013336 316 SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAELTADSGGGQGLAIGVLN---LAIVIPQMI 391 (445)
Q Consensus 316 g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~~~~~~~~~G~~~gi~n---~~~~l~qii 391 (445)
+.++..+-.+.+++..... + ++ ..+++..++|++ ...++-.+.++..+|++ ++|..+||+- .-..+.|++
T Consensus 85 s~~l~~IP~~~~~~a~~~~-~-~~--~ll~~gll~G~~GasFav~m~~~s~~fP~~--~qG~AlGI~g~GN~G~av~q~~ 158 (417)
T COG2223 85 SMLLLLIPCLGLAFAVTYP-S-TW--QLLVIGLLLGLAGASFAVGMPNASFFFPKE--KQGLALGIAGAGNLGVAVAQLV 158 (417)
T ss_pred HHHHHHHHHHHHHHHccCC-c-hH--HHHHHHHHHhcccceehcccccccccCChh--hhhHHHHHhccccccHHHHHHH
Confidence 9999999888777775331 1 11 122334457776 33333334489999997 7899999885 444455555
Q ss_pred hhhc
Q 013336 392 VSLG 395 (445)
Q Consensus 392 ~~~~ 395 (445)
+|.+
T Consensus 159 ~P~v 162 (417)
T COG2223 159 APLV 162 (417)
T ss_pred HHHH
Confidence 5544
No 204
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.60 E-value=0.00033 Score=70.97 Aligned_cols=173 Identities=15% Similarity=0.075 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 013336 228 PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI 307 (445)
Q Consensus 228 P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~ 307 (445)
|++++.+-...|.-++++..+..|.+.|+.+ ++.++ . ..| +.+.++.+...+.+.+.+++.||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~g~~~p~l~~~l~~--~g~s~----------~---~iG-~~~~~~~l~~~l~~~~~g~l~dr~ 66 (382)
T PRK11128 3 LQPTRWLALSYFGYFFAYGVFLPFWSVWLKG--QGYTP----------E---TIG-LLLGAGLVARFLGSLLIAPRVKDP 66 (382)
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhHHHHHHh--cCCCH----------H---HHH-HHHHHHHHHHHhhhHHHHHHHhhh
Confidence 4445555555555566666667777777654 33321 0 122 334456777788888999999999
Q ss_pred Cch----hhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHH
Q 013336 308 GSR----LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVL 381 (445)
Q Consensus 308 g~r----~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~ 381 (445)
||| +...++....++ .+.. .. +..+ ..++...+.|+. .......++..+.. + +++..+|..
T Consensus 67 g~~~~~~~~~~~~~~~~~~-----~~~~-~~-~~~~--~l~i~~~l~g~~~~~~~~~~~a~~~~~~-~---~~~~a~~~~ 133 (382)
T PRK11128 67 SQLIPALRLLALLTLLFAV-----AFWF-GA-HSFW--LLFVAIGLFNLFFSPLVPLTDALANTWQ-K---QIGLDYGKV 133 (382)
T ss_pred cchHHHHHHHHHHHHHHHH-----HHHH-hc-ccHH--HHHHHHHHHHHHHcccccHHHHHHHHHH-h---hccCCcchH
Confidence 984 222222221111 1111 11 2111 112222334443 33333445555542 2 357778889
Q ss_pred HHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 382 NLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 382 n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
+....++..++|.+++.+.+..|-+ ..|++.++..++..++. ++.||.
T Consensus 134 ~~~~~lg~~igp~lgg~l~~~~g~~--~~f~~~~~~~~~~~~~~-~~~~~~ 181 (382)
T PRK11128 134 RLWGSIAFVIGSALTGKLVSWFGEQ--AILWILTAGVASMLLGQ-LLRPTI 181 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChh--HHHHHHHHHHHHHHHHH-HccCCC
Confidence 9999999999999999998887754 46777666555554433 345653
No 205
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.60 E-value=0.00013 Score=61.45 Aligned_cols=84 Identities=20% Similarity=0.321 Sum_probs=64.4
Q ss_pred HHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHH
Q 013336 43 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 122 (445)
Q Consensus 43 g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 122 (445)
...+..++.+...+...+++.|..|+++|++++++......+|..+|+.+++.. .+. .+++..|.
T Consensus 57 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~-------------~~~~~~~~ 121 (141)
T TIGR00880 57 ARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVL--AQF-------------LGWRAPFL 121 (141)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHH--hcc-------------cchHHHHH
Confidence 345566666677788899999999999999999999999999999999888762 111 25677888
Q ss_pred HHHHHHHHHHhheeeEeec
Q 013336 123 VAVVFLTLCALVTIYFADE 141 (445)
Q Consensus 123 i~ai~~~i~~~~t~~~v~E 141 (445)
+.++..+++.+...+..||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 122 FLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHHHHHHHHhhcCCC
Confidence 8777666666666655665
No 206
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.59 E-value=8.3e-05 Score=80.74 Aligned_cols=112 Identities=12% Similarity=0.006 Sum_probs=81.1
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhcccccc-----------------------------
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREY----------------------------- 338 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~----------------------------- 338 (445)
.+.+..++..++.+++.||+|||+++.+|.++++++.+..++..+.. ..|
T Consensus 76 ~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~-~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 154 (633)
T TIGR00805 76 SYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLS-GRYSYSTTVSSTGNLSSANSFLCMENLTQALR 154 (633)
T ss_pred hhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhc-CCccccccccccccccccccccccCCCCCCcc
Confidence 45666777888899999999999999999999999987776653211 000
Q ss_pred --------------C-Cccee-eeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccc
Q 013336 339 --------------S-GGIEH-GIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 400 (445)
Q Consensus 339 --------------~-~~~~~-~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~ 400 (445)
. .+..+ +...+.|++ ...++-.+++.|..|++ ++|.++|+++....++..+++++++.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~--~~~~~~~i~~~~~~iG~~lG~llgg~l~ 232 (633)
T TIGR00805 155 PTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSK--NSPLYIGILESIAVFGPAFGYLLGSFCL 232 (633)
T ss_pred ccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCcc--ccHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 0 00111 123346666 44555568889999875 6899999999999999999999988776
Q ss_pred cc
Q 013336 401 AL 402 (445)
Q Consensus 401 ~~ 402 (445)
+.
T Consensus 233 ~~ 234 (633)
T TIGR00805 233 QI 234 (633)
T ss_pred hc
Confidence 54
No 207
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.57 E-value=0.00025 Score=75.00 Aligned_cols=137 Identities=15% Similarity=0.047 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc---eecchhH
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK---ITYSVPF 360 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~---~~~svP~ 360 (445)
+....+.+.+.+.+++.++++|++|||+.+.++.+++.++.+..++.. |.+ ...+.-.+.|++ ....+|
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~----~~~---~l~~GR~l~G~g~G~~~~~~p- 164 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP----SWY---QLIVGRILTGLGVGGASVLAP- 164 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh----hHH---HHHHHHHHhccchhhhhhcch-
Confidence 344466778889999999999999999999999999999888777765 322 122223455555 455666
Q ss_pred HHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 361 AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 361 aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
..++|.-|++ .||...++.+++..++++++-.+ +.........-...+.++.+-+++-++. .+++||+
T Consensus 165 iy~sEiap~~--~RG~l~~~~~l~~~~Gi~~~~~~-~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 165 VYISEIAPAH--IRGTLVSLYQLFITIGILLGYCI-NYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred hhHhhcCChh--hhHHHHHHHHHHHHHHHHHHHHH-hhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 5588888885 67999999999999999888443 3333221101123466666667766666 6788874
No 208
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.52 E-value=0.00023 Score=73.57 Aligned_cols=132 Identities=9% Similarity=-0.020 Sum_probs=89.5
Q ss_pred HHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhhhc
Q 013336 290 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAELTA 368 (445)
Q Consensus 290 ~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~~~ 368 (445)
...-++.-++.+.+.||+|.|+++.++.+.-++..+++++...+ + ...+.-.+.|++ .....-+..+...+|
T Consensus 72 ~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl----~---~L~i~R~llGvaEA~~~A~~syI~~WfP 144 (511)
T TIGR00806 72 PYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSV----W---HMQLMEVFYSVTMAARIAYSSYIFSLVP 144 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH----H---HHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 33445667788999999999999999999999888888776532 1 122334567777 333355788899999
Q ss_pred cCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 369 DSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 369 ~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
++ ++|+..|+.|.+..++.++++++.+.+. .+|-......-.-++.+...+++..+++|.
T Consensus 145 ~k--ER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 145 PS--RYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 86 6788899999999999999999988844 344221111222333333444444467773
No 209
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.45 E-value=7.1e-05 Score=77.16 Aligned_cols=143 Identities=17% Similarity=0.088 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhh----hcCchhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeee----ccccccc-e
Q 013336 285 GLLLNSVVLGVSSFLIEPMCR----WIGSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGI----GANQAIK-I 354 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~----r~g~r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Gi~-~ 354 (445)
.+.+.-+..++...+.|.++| |+||||.|+ +|.+..++++.++..... ..++.....++ ..++.+. .
T Consensus 42 i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p---~~~~~~~~~~~~~~~~~l~~~~~t 118 (428)
T PF13347_consen 42 ILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPP---AGLSFTAKLVWLFVFYILFDIAYT 118 (428)
T ss_pred HHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhcccc---chhhhhhHHHHHHHHHHHHHHhhh
Confidence 333556777788889999999 789999988 588888887766553310 01100001111 1123333 4
Q ss_pred ecchh-HHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCc-----chhHHHHHHHHHHHHHHhhhee
Q 013336 355 TYSVP-FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG-----NIPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 355 ~~svP-~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~-----~~~~f~~~~v~~ll~~~~~~~~ 428 (445)
...+| .++..|..+++ ++|....+.-+....++.++++.+.+.+.+.+|.+ ......+.+++.+++.+.+.+.
T Consensus 119 ~~~i~~~al~~~lt~~~-~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~ 197 (428)
T PF13347_consen 119 FVQIPYNALIPELTPDP-DERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFF 197 (428)
T ss_pred hccCchhhcCccccccH-hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhhe
Confidence 55677 46667776654 46778888888899999988888888887766643 1333555666666677767778
Q ss_pred ccC
Q 013336 429 LPH 431 (445)
Q Consensus 429 vpe 431 (445)
+||
T Consensus 198 ~ke 200 (428)
T PF13347_consen 198 VKE 200 (428)
T ss_pred eee
Confidence 888
No 210
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.44 E-value=0.0011 Score=67.55 Aligned_cols=75 Identities=17% Similarity=0.062 Sum_probs=46.2
Q ss_pred CCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeeccCCC
Q 013336 66 SGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLT 145 (445)
Q Consensus 66 ~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~~ 145 (445)
.|++||..|+.+..+..-+|..+|+++.-++ .++-. +. +........+|+...++.++.+.++.+..+|+|..
T Consensus 169 F~~~qra~A~~~~v~~n~LGvavg~llppil-V~~~~----~~--~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t 241 (480)
T KOG2563|consen 169 FPPDQRAIATVLGVMGNPLGVAVGFLLPPIL-VPSSK----DS--EDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT 241 (480)
T ss_pred CCcchhhhhhhHHHhcchHHHHHHhhcccee-cCCCC----Cc--chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 4889999999999999899999999988763 11100 00 00011233345545555455556666677776654
Q ss_pred CC
Q 013336 146 VN 147 (445)
Q Consensus 146 ~~ 147 (445)
+.
T Consensus 242 Pp 243 (480)
T KOG2563|consen 242 PP 243 (480)
T ss_pred CC
Confidence 43
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=97.33 E-value=0.00026 Score=73.33 Aligned_cols=142 Identities=15% Similarity=0.069 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh----cCchhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeec----cccccc-
Q 013336 284 FGLLLNSVVLGVSSFLIEPMCRW----IGSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIG----ANQAIK- 353 (445)
Q Consensus 284 ~~l~~~~i~~~i~s~i~~~l~~r----~g~r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Gi~- 353 (445)
..+.+.-+..++...+.|.++|| +||||.|+ .+.+.+++++..+...+ + ++......+. .+.++.
T Consensus 49 ~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p----~-~~~~~~~~~~~~~~~l~~~~~ 123 (444)
T PRK09669 49 TMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTP----D-FGATGKIIYACVTYILLSLVY 123 (444)
T ss_pred HHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCC----C-CCcchHHHHHHHHHHHHHHHH
Confidence 34445677788888999999998 68877777 47677777654433322 1 1000011111 122323
Q ss_pred eecchhH-HHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcc-----hhHHHHHHHHHHHHHHhhhe
Q 013336 354 ITYSVPF-AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGN-----IPAFVLASLSALAGGVVATL 427 (445)
Q Consensus 354 ~~~svP~-aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~-----~~~f~~~~v~~ll~~~~~~~ 427 (445)
....+|| ++.+|..++. ++|+...+.-.....++.++++.+..++...+|..+ ...+.+.++++++..+.+.+
T Consensus 124 t~~~ip~~al~~~~t~~~-~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 124 TAINVPYCAMPGAITNDP-RERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred HhhcchHHHhHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 3455664 5556655443 356776777777777887777776666655443211 11344445555555444544
Q ss_pred eccC
Q 013336 428 KLPH 431 (445)
Q Consensus 428 ~vpe 431 (445)
..+|
T Consensus 203 ~~~e 206 (444)
T PRK09669 203 MTKE 206 (444)
T ss_pred CeEE
Confidence 4444
No 212
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.26 E-value=0.00026 Score=74.08 Aligned_cols=142 Identities=8% Similarity=0.072 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhh----hcCchhhHHH-HHHHHHHHHHHHHHhhhccccccCCcceeeecc----ccccc-e
Q 013336 285 GLLLNSVVLGVSSFLIEPMCR----WIGSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGA----NQAIK-I 354 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~----r~g~r~l~~~-g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~----~~Gi~-~ 354 (445)
.+.+.-+..++...+.|.++| |+||||.|++ |.+.+++++..+.... +... ....++.. +.++. .
T Consensus 47 i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p----~~~~-~~~~~~~~~~~~l~~~~~t 121 (473)
T PRK10429 47 LFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAH----LFEG-TAQYVFVCVTYILWGMTYT 121 (473)
T ss_pred HHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCC----CCCc-cHHHHHHHHHHHHHHHHHH
Confidence 344567778888999999999 5599888775 7777777654442211 1110 00111211 22333 4
Q ss_pred ecchhH-HHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcc-----hhHHHHHHHHHHHHHHhhhee
Q 013336 355 TYSVPF-AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGN-----IPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 355 ~~svP~-aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~-----~~~f~~~~v~~ll~~~~~~~~ 428 (445)
...+|| +++.|..++. ++|....+.-.....++.++++.+..++++.+|..+ .....+.+++.+++.+++.+.
T Consensus 122 ~~~ip~~al~~~lt~~~-~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~ 200 (473)
T PRK10429 122 IMDIPFWSLVPTLTLDK-REREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRN 200 (473)
T ss_pred HHcchHHhhhHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 456775 6667766443 356666666566666666666655554444333211 122334444445555555555
Q ss_pred ccCC
Q 013336 429 LPHL 432 (445)
Q Consensus 429 vpe~ 432 (445)
.||.
T Consensus 201 ~~e~ 204 (473)
T PRK10429 201 VHEV 204 (473)
T ss_pred ceec
Confidence 6663
No 213
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.25 E-value=0.002 Score=67.07 Aligned_cols=137 Identities=20% Similarity=0.155 Sum_probs=102.6
Q ss_pred HHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhhhc
Q 013336 290 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAELTA 368 (445)
Q Consensus 290 ~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~~~ 368 (445)
++.+++.+...|-++||+|||..+.......-+.-+.+.+. .|+ ..++..+.|.. .+.+.-++.+++...
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~------~~~---~~~~~~l~g~~~~~~s~~~a~vadis~ 142 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ------GYW---FFLLLGLSGGFSAIFSVGFAYVADISS 142 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH------HHH---Hhhhcccccchhhhhhhhhhheeeccc
Confidence 45677889999999999999998887665554433322222 121 33344444433 566667788888888
Q ss_pred cCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCCccc
Q 013336 369 DSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFRS 439 (445)
Q Consensus 369 ~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~~~~ 439 (445)
.+ .|-..+|+.+-+.+.+-.++|+.++.+.+..|. ..+|.++.++.+++.++..+++||+.-+.-++
T Consensus 143 ~~--~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~--a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~ 209 (463)
T KOG2816|consen 143 EE--ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGI--ALVFLIAAASGILSLLYMLLFLPESLQEKERS 209 (463)
T ss_pred hh--HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhhccccccCccccc
Confidence 76 567788999999999999999999998887664 45799999999999999999999977665554
No 214
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.22 E-value=0.0018 Score=65.63 Aligned_cols=155 Identities=12% Similarity=0.025 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchh
Q 013336 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (445)
Q Consensus 232 ~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~ 311 (445)
+.+++..|.-.+++..+..|.+.|..+ ++-++ -+ +| +.+..+.+...+...+.++++||+|||+
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~--~g~s~---------~~----ig-~~~s~~~~~~~~~~~~~g~l~d~~~~~~ 70 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKG--IGLGE---------EM----IG-LLIGAALIARFAGGLFFAPLIKDANHII 70 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCH---------HH----HH-HHHHHHHHHHHHHHHHHHHHHHhcCcHH
Confidence 334444555555555666677766654 22221 01 22 2223556677778888999999999854
Q ss_pred hH----HHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHH
Q 013336 312 VW----AISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAI 385 (445)
Q Consensus 312 l~----~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~ 385 (445)
.. .++..++++. ...+. ++++ ..++...+.|.. ...++..++..+. + +++|+.+|......
T Consensus 71 ~~~~~~~~~~~l~~~~--~~~~~-----~~~~--~l~~~~~l~~~~~~~~~p~~~al~~~~-~---~~~~~~~g~~~~~~ 137 (382)
T TIGR00902 71 IALRLLALASAIFAAA--FSAGA-----HNAW--LLFIAIGLFALFFSAGMPIGDALANTW-Q---KQFGLDYGKVRLIG 137 (382)
T ss_pred HHHHHHHHHHHHHHHH--HHHhh-----hhHH--HHHHHHHHHHHHHccchhHHHHHHHHH-H---HHcCCCccHHHHHH
Confidence 33 2222222221 11111 2221 111222223333 2233334554433 2 35688999999999
Q ss_pred HHHHHHhhhccccccccccCcchhHHHHHHHH
Q 013336 386 VIPQMIVSLGAGPWDALFGGGNIPAFVLASLS 417 (445)
Q Consensus 386 ~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~ 417 (445)
.++.++++.++|.+.+..|-+ ..|.+.++.
T Consensus 138 slG~~~g~~l~g~l~~~~g~~--~~f~~~~~~ 167 (382)
T TIGR00902 138 SAAFIIGSALFGGLIGMFDEQ--NILAILTAG 167 (382)
T ss_pred HHHHHHHHHHHHHHHHHcChh--HHHHHHHHH
Confidence 999999999999998887743 355555443
No 215
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.20 E-value=8.3e-05 Score=79.01 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=2.9
Q ss_pred eehhhHHHHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhcccccc
Q 013336 35 RAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG 96 (445)
Q Consensus 35 ~~i~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~ 96 (445)
....+.++|-+++.++....++--.+||-|.+++++-..-.|+...+..+|-.+||++|+..
T Consensus 139 ~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~ 200 (539)
T PF03137_consen 139 GYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFC 200 (539)
T ss_dssp -------------SSS----------------------------------------------
T ss_pred HHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHH
Confidence 34578889999999999999999999999999999999999999999999999999999864
No 216
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.18 E-value=0.0015 Score=68.02 Aligned_cols=136 Identities=15% Similarity=0.138 Sum_probs=87.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-ccccccc---eecchhHHH
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GANQAIK---ITYSVPFAI 362 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~---~~~svP~aL 362 (445)
.++.+.+++.+++.++++||+|||+.+.++.++..++.+++.+.... +.+. .+++ -.+.|+. ....+| ..
T Consensus 67 s~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~--~~~e---~li~GR~i~Gl~~gl~~~~~p-my 140 (485)
T KOG0569|consen 67 SIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA--PSFE---MLILGRLIVGLACGLSTGLVP-MY 140 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh--hhHH---HHHHHHHHHHHHhHHHHHHHH-HH
Confidence 35777888899999999999999999888877777666555544332 2221 2222 3345654 344455 45
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhH--HHHHHHHHHHHHHhhheeccCCC
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPA--FVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~--f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
++|.-|++ -||..-.+.++++.++.+++..++.+ ..+|++..|. +.+..+.++ ..++...++||+-
T Consensus 141 l~E~sP~~--~RG~~g~~~~~~~~~g~ll~~~~~l~--~ilGt~~~W~~l~~~~~i~~~-~~l~~l~~~PESP 208 (485)
T KOG0569|consen 141 LTEISPKN--LRGALGTLLQIGVVIGILLGQVLGLP--SLLGTEDLWPYLLAFPLIPAL-LQLALLPFLPESP 208 (485)
T ss_pred HhhcChhh--hccHHHHHHHHHHHHHHHHHHHHccH--HhcCCCcchHHHHHHHHHHHH-HHHHHHhcCCCCc
Confidence 88999987 67888888899999998888554432 3345544333 223333333 3344557899953
No 217
>PRK11462 putative transporter; Provisional
Probab=97.18 E-value=0.0005 Score=71.79 Aligned_cols=114 Identities=11% Similarity=0.046 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhh----cCchhhHHH-HHHHHHHHHHHHHHhhhccccccCCcceeeecc----ccccc-e
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRW----IGSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGA----NQAIK-I 354 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r----~g~r~l~~~-g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~----~~Gi~-~ 354 (445)
.+++.-+..++.-.+.|.++|| +||||.|++ |.+.+++++..+...+.. +.. ...++.. ++.+. .
T Consensus 50 i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~--s~~---~~~~y~~~~~~~~~~~~t 124 (460)
T PRK11462 50 MFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDL--SMN---GKMIYAAITYTLLTLLYT 124 (460)
T ss_pred HHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCC--Ccc---hHHHHHHHHHHHHHHHHH
Confidence 3345566677778888899986 699999885 777888776554333211 100 1112211 12333 5
Q ss_pred ecchhH-HHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccccccc
Q 013336 355 TYSVPF-AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 404 (445)
Q Consensus 355 ~~svP~-aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g 404 (445)
...+|| +|.+|..++. ++|....+.-.....++.++++.+..++++..|
T Consensus 125 ~~~ipy~al~~~lt~d~-~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g 174 (460)
T PRK11462 125 VVNIPYCALGGVITNDP-TQRISLQSWRFVLATAGGMLSTVLMMPLVNLIG 174 (460)
T ss_pred HHhccHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 556786 5555555544 578888899999989888888887777666555
No 218
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.17 E-value=3e-05 Score=80.17 Aligned_cols=138 Identities=11% Similarity=0.018 Sum_probs=90.1
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAE 365 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~ 365 (445)
...+.+.+.+++.+.+.||+|||+.+.++.++..++.+...+.+.. +.+. ...+.-.+.|++ ....+-..++.|
T Consensus 54 ~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~--~~~~--~~~~~R~~~G~~~g~~~~~~~~~~~E 129 (451)
T PF00083_consen 54 SFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY--NNFW--MLLIGRFLIGFGIGGAYVVSPIYISE 129 (451)
T ss_pred HHHhhhcccccccccccccccccccccccccccccccccccccccc--cccc--cccccccccccccccccccccccccc
Confidence 3455667789999999999999999999988888876665555311 0221 223334456665 333333477899
Q ss_pred hhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCc-chhHHHHHHHHHHHHHHhhheeccCC
Q 013336 366 LTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG-NIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 366 ~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~-~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
..|++ .||....+.+.+..++.+++..+.-.+.+..+.+ -...+.+.++.+++..+ ..+++||+
T Consensus 130 ~~~~~--~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pES 194 (451)
T PF00083_consen 130 IAPPK--HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPES 194 (451)
T ss_pred ccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 99886 5799999999999999888877654442222200 12345566666655444 44788985
No 219
>PTZ00207 hypothetical protein; Provisional
Probab=97.12 E-value=0.0011 Score=71.10 Aligned_cols=124 Identities=9% Similarity=0.011 Sum_probs=78.7
Q ss_pred HhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhc--cccccCCcceeeeccccccc--eecchhHHHhhhhhccCC
Q 013336 296 SSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVI--SVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSG 371 (445)
Q Consensus 296 ~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~ 371 (445)
..++.|++.||+|+|+++.++.++++++.+.+++.... ..+.+ ...+...+.|++ ..++.....+.+.+|+
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~---~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~-- 151 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVV---RLSVYNGLMTLGCMLFDLGAVVTVLSVFPS-- 151 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhChh--
Confidence 45567999999999999999999999998877765210 00111 111223345555 2333445567778874
Q ss_pred CCcccchhHHHHHHHHHHHHhhhcccc-ccccccCcchhHHHHHHHHHHHHHHhhheec
Q 013336 372 GGQGLAIGVLNLAIVIPQMIVSLGAGP-WDALFGGGNIPAFVLASLSALAGGVVATLKL 429 (445)
Q Consensus 372 ~~~G~~~gi~n~~~~l~qii~~~~~g~-l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~v 429 (445)
++|..+|+.+.+..++..+.+.+... +.+.. ...|++.+++.++.+++...++
T Consensus 152 -~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~----~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 152 -NRGAVVAIMKTFTGLGSAILGSIQLAFFSDNT----SAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHhhe
Confidence 46999999999999999765444443 33222 2345666666666555555544
No 220
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.0018 Score=67.53 Aligned_cols=133 Identities=15% Similarity=0.053 Sum_probs=96.6
Q ss_pred HHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhh
Q 013336 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAEL 366 (445)
Q Consensus 289 ~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~ 366 (445)
+.....+..+..+++.||+|-|+++..+.++.+++.+.+.++... +.+ ..++.-.+.|++ +..+.-..++++-
T Consensus 82 ~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~--~~~---~~~~~R~lqGl~~g~~~pa~~~i~~~W 156 (466)
T KOG2532|consen 82 FFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI--GFY---LLLVLRFLQGLGQGVLFPAIGSILAKW 156 (466)
T ss_pred HHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh--cch---hhHHHHHHhHHHHhHHHhhhhceeeeE
Confidence 344556778889999999999999999999999877777766532 211 233345567766 3444344667777
Q ss_pred hccCCCCcccchhHHHHHHHHHHHHhhhcccccccc-ccCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 367 TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL-FGGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~-~g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
.|.. ++++..+++.+...++.++.-.+.|.+.+. +| . ..+|++.|+++++-.++..++..
T Consensus 157 ~P~~--Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W-~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 157 APPN--ERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-W-PSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred CCHH--HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-C-chHHHHHHHHHHHHHHHHHHHhc
Confidence 7876 579999999999999999998888988887 55 3 35789888887776554444443
No 221
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.91 E-value=0.0023 Score=64.86 Aligned_cols=171 Identities=17% Similarity=0.047 Sum_probs=89.4
Q ss_pred HHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHH-HHHHHHHHHHHhhhhhh-hhhhcCchhhHH
Q 013336 237 VMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG-LLLNSVVLGVSSFLIEP-MCRWIGSRLVWA 314 (445)
Q Consensus 237 ~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~-l~~~~i~~~i~s~i~~~-l~~r~g~r~l~~ 314 (445)
..+.+-+.+.-...+.+.|+.+. +-++ ..+|... +.+..+..++.+.+.++ ..||.||||.|+
T Consensus 9 ly~~~g~~~~~~~p~lp~~l~~~--g~~~-------------~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i 73 (390)
T TIGR02718 9 LYLSQGIPIGLAMDALPTLLRED--GAPL-------------TALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWV 73 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHc--CCCH-------------HHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHH
Confidence 34444444445556667666552 1111 1244332 23456677777777755 688999999997
Q ss_pred HHH-HHHHHHHHHHHHhhhccccccCCcceeeeccccccceecchhHHH-----hhhhhccCCCCcccchhHHHHHHHHH
Q 013336 315 ISN-FIVFACMATTAIISVISVREYSGGIEHGIGANQAIKITYSVPFAI-----TAELTADSGGGQGLAIGVLNLAIVIP 388 (445)
Q Consensus 315 ~g~-~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~svP~aL-----ls~~~~~~~~~~G~~~gi~n~~~~l~ 388 (445)
+.. ++.+++.....+..... +.. ... ..........+.+... ..|..+. +.++...++......++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~-~~~----~~~-~~~~~~~~~~~a~~d~~~d~~~~~~~~~--~~~~~~~~~~~~g~~lG 145 (390)
T TIGR02718 74 LPMQCLVSACLASLALVGPDV-AGA----GWA-VGLLACASLASATQDIATDGMAAEHFNG--RTLAKGNAVQIAGVMIG 145 (390)
T ss_pred HHHHHHHHHHHHHHHcCCcch-hhH----HHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCH--hhhhHHHHHHHHHHHHH
Confidence 654 33333333333221110 100 000 1111001112222222 3333332 24466667777777788
Q ss_pred HHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCC
Q 013336 389 QMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 432 (445)
Q Consensus 389 qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~ 432 (445)
.++++...+.+.+..|- ...|++.+++.++..+...+..|++
T Consensus 146 ~~~g~~~~~~l~~~~gw--~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 146 FFGGGAGTLVLFGKFGQ--RPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HHHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88888777777777764 3578888888777766665555543
No 222
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.88 E-value=0.0034 Score=64.18 Aligned_cols=174 Identities=16% Similarity=0.140 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHH--HHHHHHHHHHhhhhhhhhhh
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL--LLNSVVLGVSSFLIEPMCRW 306 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l--~~~~i~~~i~s~i~~~l~~r 306 (445)
++++++....|+-.+.|-.++.|++.|+.|. +|.+-+..|+ ...++++.+...+.|.+.||
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~-----------------~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk 69 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQV-----------------AGLSGTEIGIIFSAGSLFALLAQPVYGFISDK 69 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------H---HHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccc-----------------cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch
Confidence 4566666666666666666777778888752 1111122222 23556677777888999999
Q ss_pred cCchhhHH--HHHHHHHHH-HHHHHHhhhccccccCCcceeeec-cccccceecchhHHHhhhhhc-cCCCCcccchhHH
Q 013336 307 IGSRLVWA--ISNFIVFAC-MATTAIISVISVREYSGGIEHGIG-ANQAIKITYSVPFAITAELTA-DSGGGQGLAIGVL 381 (445)
Q Consensus 307 ~g~r~l~~--~g~~~~ai~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gi~~~~svP~aLls~~~~-~~~~~~G~~~gi~ 381 (445)
+|.||-.+ ++.+....+ +....+.+....|.+ ...+.. ..+|+...-.+| +.|-.. +-.|..|-++|=.
T Consensus 70 lg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~---lg~iig~i~l~~~f~~~~~---~~Ea~~er~sr~~~feYG~~ 143 (412)
T PF01306_consen 70 LGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFW---LGAIIGGIYLGLVFNAGVP---LSEAYAERVSRRNGFEYGRA 143 (412)
T ss_dssp CTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-H---HHHHHTTTTTTTTTTTHHH---HHHHHHHHHHHHHSS-HHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHcccch---HHHHHHHHHHHHhcCCcchH
Confidence 99776544 332221111 111111111111211 011111 112221111222 123221 1124568888888
Q ss_pred HHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhhee
Q 013336 382 NLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 428 (445)
Q Consensus 382 n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~ 428 (445)
=..-+++-.+++.+.|.+.+..+ ...|+++++.+++..++..+.
T Consensus 144 R~wGSig~ai~s~~~G~L~~i~p---~~~fwi~s~~~~il~lll~~~ 187 (412)
T PF01306_consen 144 RMWGSIGFAIASLLAGILFNINP---NIIFWIASAAAIILLLLLLLL 187 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHhhHHHHHHHHHhheeeeeCc---cHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999887532 346887777666655554443
No 223
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.85 E-value=0.0018 Score=66.93 Aligned_cols=135 Identities=12% Similarity=0.113 Sum_probs=80.9
Q ss_pred HHHHHHHHHhhhhhhhhhh----cCchhhHHH-HHHHHHHHHHHHHHhhhccccccCC-cceeeeccccccc-eecchhH
Q 013336 288 LNSVVLGVSSFLIEPMCRW----IGSRLVWAI-SNFIVFACMATTAIISVISVREYSG-GIEHGIGANQAIK-ITYSVPF 360 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r----~g~r~l~~~-g~~~~ai~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Gi~-~~~svP~ 360 (445)
+-=+..++...++|.++|| +||||.|++ +.+.+++...++...+.+ +.... .-..++-.+.++. ...-+||
T Consensus 56 v~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~--~~~~k~~ya~vtY~l~~l~YT~vniPy 133 (467)
T COG2211 56 VARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDF--SMTGKLIYALVTYMLLGLGYTLVNIPY 133 (467)
T ss_pred HHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCc--ccCcchHHHHHHHHHHHHHHHheeCch
Confidence 4455666777788888876 688899885 778888766554443311 10000 0011222234444 5556786
Q ss_pred H-HhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcc--hhHHHHHHHHHHHHHHhh
Q 013336 361 A-ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGN--IPAFVLASLSALAGGVVA 425 (445)
Q Consensus 361 a-Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~--~~~f~~~~v~~ll~~~~~ 425 (445)
. |.++..++ .++|-.-.+.=..+..+++++...+.+++++.+|.++ ...+..+.+.++++.+..
T Consensus 134 ~al~~~iT~d-~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~ 200 (467)
T COG2211 134 GALGPEITQD-PQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILL 200 (467)
T ss_pred hhcchhhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Confidence 4 44455444 3466777788888889999999999999988877653 123444444444444433
No 224
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.85 E-value=0.0019 Score=69.06 Aligned_cols=129 Identities=14% Similarity=0.084 Sum_probs=77.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAE 365 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~ 365 (445)
..+.+.+++...+.++++|.+|||...+++.++..++++..+-.... +. ...-..+.|++ ..+.+-+..++|
T Consensus 85 ~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~--~~-----~iag~~l~GvgaG~~~~~~~~isE 157 (599)
T PF06609_consen 85 TAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNM--NT-----FIAGMVLYGVGAGVQELAALAISE 157 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcH--HH-----HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34566677777889999999999999999999999888776655422 11 11123445555 222222455899
Q ss_pred hhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhh
Q 013336 366 LTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 426 (445)
Q Consensus 366 ~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~ 426 (445)
..|.. .|+...++.......+..+++.+...+.. .++. +|.|++..+...++.+...
T Consensus 158 l~p~k--~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-~~~W-Rw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 158 LVPNK--WRGLGLAIASIPFIITTWISPLIAQLFAA-HSGW-RWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred hcccc--hhhhHhHHHHHHHHhhhcccHHHHHHhcc-CCCc-chHHHHHHHHHHHHHHHHH
Confidence 99875 44554454444333333333333333222 2233 5778887777777665554
No 225
>PTZ00207 hypothetical protein; Provisional
Probab=96.75 E-value=0.012 Score=63.15 Aligned_cols=73 Identities=19% Similarity=0.223 Sum_probs=47.2
Q ss_pred cchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHH-HhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHH
Q 013336 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNIL-GFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (445)
Q Consensus 54 ~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~l-G~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~ 132 (445)
...+....+.+..| ++||++.++...+.++|+.+ +++..++. . ++++..|++.+++.++..
T Consensus 137 ~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~--~---------------~~~~~~fl~l~vl~~vv~ 198 (591)
T PTZ00207 137 FDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF--S---------------DNTSAYFFFLMSFALVVG 198 (591)
T ss_pred HHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH--H---------------HhHHHHHHHHHHHHHHHH
Confidence 34566778888885 78999999999999999975 44444331 1 134555655555444444
Q ss_pred hheeeEeeccCC
Q 013336 133 LVTIYFADEVPL 144 (445)
Q Consensus 133 ~~t~~~v~E~p~ 144 (445)
++....++++|.
T Consensus 199 ll~~~~vr~p~~ 210 (591)
T PTZ00207 199 ILAIVFMRLPPF 210 (591)
T ss_pred HHHHhheeCCcc
Confidence 555556666654
No 226
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.53 E-value=0.017 Score=58.91 Aligned_cols=76 Identities=7% Similarity=0.045 Sum_probs=55.5
Q ss_pred cchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHh
Q 013336 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (445)
Q Consensus 54 ~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~ 133 (445)
+.....+||=-.+|+++-+++-++.....-+|-.+|.++|-.+ -.. ...+++.+.+++.....++++
T Consensus 110 ~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQll--vs~-----------~~~sy~~L~~isl~~~~~a~~ 176 (412)
T PF01770_consen 110 AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLL--VSF-----------GGVSYFQLNYISLASVSLALL 176 (412)
T ss_pred HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHh-----------cCCCHHHHHHHHHHHHHHHHH
Confidence 4566779999999999999999998888888888888777542 111 124778888888877777766
Q ss_pred heeeEeeccC
Q 013336 134 VTIYFADEVP 143 (445)
Q Consensus 134 ~t~~~v~E~p 143 (445)
++++ +|-++
T Consensus 177 ~~~f-LP~~~ 185 (412)
T PF01770_consen 177 IALF-LPMPK 185 (412)
T ss_pred HHHH-cCCCC
Confidence 5554 56544
No 227
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.46 E-value=0.047 Score=54.45 Aligned_cols=134 Identities=14% Similarity=0.141 Sum_probs=76.5
Q ss_pred HHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-ccccccc--eecchhHHH-hhhh
Q 013336 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GANQAIK--ITYSVPFAI-TAEL 366 (445)
Q Consensus 291 i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~--~~~svP~aL-ls~~ 366 (445)
+++++.+.+.|.+.||+|||+..++-.++.+++.+ .... +++. .+.+ -.+-|++ ++.++.=+- +.|.
T Consensus 80 ~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl----~k~~--~~~~---~L~~GRvlgGiaTSLLfS~FEsW~V~Eh 150 (354)
T PF05631_consen 80 ASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL----TKHS--SNYP---VLLLGRVLGGIATSLLFSAFESWMVHEH 150 (354)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH----HHhc--cccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788899999999999999987777766544 2322 2221 2222 2345555 344444333 4444
Q ss_pred hccCCCCcccc--hhHHHHHHHHHHHHhhhcccc----ccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCC
Q 013336 367 TADSGGGQGLA--IGVLNLAIVIPQMIVSLGAGP----WDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNS 436 (445)
Q Consensus 367 ~~~~~~~~G~~--~gi~n~~~~l~qii~~~~~g~----l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~ 436 (445)
. +. +...+ -..+..+..+.+-+.+...|. +.+..|.++..+|..+.++..++++++...=+|..|.+
T Consensus 151 ~-~~--g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~ 223 (354)
T PF05631_consen 151 N-KR--GFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDT 223 (354)
T ss_pred H-Hc--CCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCc
Confidence 3 22 22211 122222222444344444443 44555544456788998888888888776778887763
No 228
>PRK09848 glucuronide transporter; Provisional
Probab=96.44 E-value=0.0045 Score=64.11 Aligned_cols=40 Identities=13% Similarity=0.067 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhc----CchhhHH-HHHHHHHHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWI----GSRLVWA-ISNFIVFACM 324 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~----g~r~l~~-~g~~~~ai~~ 324 (445)
.+....+..++...+.|+++||. ||||.|+ .+.+..+++.
T Consensus 49 ~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~ 93 (448)
T PRK09848 49 MLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFS 93 (448)
T ss_pred HHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHH
Confidence 33456777888899999999996 8888775 4555555443
No 229
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=96.43 E-value=0.0029 Score=66.82 Aligned_cols=131 Identities=15% Similarity=0.109 Sum_probs=88.9
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-ccccccc-eecchh-HHHhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GANQAIK-ITYSVP-FAITA 364 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~-~~~svP-~aLls 364 (445)
+...+..+.+.+...+.||+|.|.+.+.|.++.+++++...+.+ +.+. .++. ..+.|++ .+...| -.+++
T Consensus 89 l~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~----~i~~---l~lt~gvi~G~G~~~~~~paiviv~ 161 (509)
T KOG2504|consen 89 LLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFAT----SLWQ---LYLTFGVIGGLGLGLIYLPAVVILG 161 (509)
T ss_pred HHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHh----hHHH---HHHHHHHHhhccchhhhcchhhhhh
Confidence 44445566677788899999999999999999999998888876 3221 1121 2234555 222223 35577
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
.|+++ +|+...|+..+-..++.++-|.+...+.+..|-. ..++..+.+++-..++....-|
T Consensus 162 ~YF~k---kR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r--~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 162 TYFEK---KRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWR--GALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred hHhHH---HHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHcCC
Confidence 88876 5788899999999999888888888888887754 3444444444544454444444
No 230
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.43 E-value=0.0069 Score=63.65 Aligned_cols=138 Identities=17% Similarity=0.072 Sum_probs=91.2
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-ee-cchhHHHhhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-IT-YSVPFAITAE 365 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~-~svP~aLls~ 365 (445)
++.+.-++.-++.+.+.||+...+......+.-++-.+++..+. | ++ ..+++-.+.|+. .. .+.--++++.
T Consensus 89 ~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~----s-~~--~~ialr~llGl~es~~wP~~~~~lg~ 161 (495)
T KOG2533|consen 89 VFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH----S-FP--GLIALRFLLGLFESGGWPGVVAILGN 161 (495)
T ss_pred HHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh----h-hH--HHHHHHHHHHHHhcccchHHHHHHHh
Confidence 34445556677888999999966665554444433222333332 2 21 123334456666 33 3333567788
Q ss_pred hhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccC----cchhHHHHHHHHHHHHHHhhheeccCCCC
Q 013336 366 LTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG----GNIPAFVLASLSALAGGVVATLKLPHLSS 434 (445)
Q Consensus 366 ~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~----~~~~~f~~~~v~~ll~~~~~~~~vpe~~~ 434 (445)
.+.++ ++|+-+|+++++..+++++++++...+...-|. ...+.|++-|++++..++.+.+++|+...
T Consensus 162 wy~~~--e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 162 WYGKS--ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hcChh--hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 88876 689999999999999999999998876432111 02467999999999999989888887554
No 231
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.42 E-value=0.0093 Score=61.15 Aligned_cols=173 Identities=15% Similarity=0.167 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC-ch
Q 013336 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG-SR 310 (445)
Q Consensus 232 ~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g-~r 310 (445)
.|++...|+.++.+-.+..|.+.|+.+.-|.+ .++| ..+....+...+...+.+.++||.+ +|
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~---------------~qIG-~l~a~~~~~~i~~~~~~g~~aDr~~~~~ 68 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPYLPLYLESRGFSG---------------TQIG-ILLAVGPLARIVSPPFWGAIADRFGSAK 68 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCH---------------HHHH-HHHHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence 46777888888888888888888887632221 1233 2233456677788889999999985 56
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-ccccccceecchh--HHHhhhhhccCCCCcccchhHHHHHHHH
Q 013336 311 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GANQAIKITYSVP--FAITAELTADSGGGQGLAIGVLNLAIVI 387 (445)
Q Consensus 311 ~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~~~~svP--~aLls~~~~~~~~~~G~~~gi~n~~~~l 387 (445)
+++.+.+++.++.+...... ++++ .+.+ ..+..+.-.-.+| -++.-++.+ +.+.++|-.=..-.+
T Consensus 69 ~~l~~~~l~~~~~~~~~~~~-----~~f~---~~~~~~~l~~~~~~p~~pl~dsi~~~~~~----~~~~~YG~iRlwGSi 136 (400)
T PF03825_consen 69 RILALLSLLSALALLLLAFS-----SSFW---WLFVIMLLFSFFFSPTMPLSDSIALSYLG----DRGKDYGRIRLWGSI 136 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHh-----ccHH---HHHHHHHHHHHHHccHHHHHHHHHHHHcc----cccCCCCcchhhhhH
Confidence 66667777776655443332 2221 1111 1111111111122 233333332 356667777777777
Q ss_pred HHHHhhhcccc-ccccccCc-chhHHHHHHHHHHHHHHhhheeccCCC
Q 013336 388 PQMIVSLGAGP-WDALFGGG-NIPAFVLASLSALAGGVVATLKLPHLS 433 (445)
Q Consensus 388 ~qii~~~~~g~-l~~~~g~~-~~~~f~~~~v~~ll~~~~~~~~vpe~~ 433 (445)
+-+++++..+. +....+.+ ....++++++.+++.+.++ +.+|+++
T Consensus 137 Gf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~~ 183 (400)
T PF03825_consen 137 GFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFLPKTP 183 (400)
T ss_pred HHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhCCCCc
Confidence 77777654332 22222211 1234566665555554433 3445543
No 232
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=95.81 E-value=0.031 Score=55.69 Aligned_cols=123 Identities=15% Similarity=0.088 Sum_probs=82.2
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccc--cceecc-hhHHHhh
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQA--IKITYS-VPFAITA 364 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--i~~~~s-vP~aLls 364 (445)
+--+.-.+.+...+++.+|+|.++.+.++.++.+++.+.=... +.+ ..+.-..+.| |++.+. +| +++-
T Consensus 55 LPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-----~~~---~L~~gt~l~G~gIav~nVLLP-slIK 125 (395)
T COG2807 55 LPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-----GLP---LLFLGTLLAGAGIAVINVLLP-SLIK 125 (395)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-----cHH---HHHHHHHHHHhhHHHHHHhhh-HHHH
Confidence 3444445668889999999999999999888887764421111 111 0111122333 334443 34 7788
Q ss_pred hhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHH
Q 013336 365 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 423 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~ 423 (445)
+.+|+ +.|..+|++..+..+++.+++....++.+..++. ...+.+=++.++++.+
T Consensus 126 ~~Fpk---~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW-~~aL~~WAl~allAl~ 180 (395)
T COG2807 126 RDFPK---RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGW-RGALGFWALLALLALL 180 (395)
T ss_pred hhccc---chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccH-HHHHHHHHHHHHHHHH
Confidence 88876 5799999999999999999999999988776544 3345555666666655
No 233
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=95.65 E-value=0.026 Score=56.99 Aligned_cols=101 Identities=7% Similarity=-0.039 Sum_probs=69.3
Q ss_pred HHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeec----cccccceecchhHHHhhhhhc
Q 013336 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIG----ANQAIKITYSVPFAITAELTA 368 (445)
Q Consensus 293 ~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Gi~~~~svP~aLls~~~~ 368 (445)
-++.++..+.+.+|+|+|+-.++|+.++++++.+..-+... ..| .+.+. ...|+++..+.-..+++..-|
T Consensus 61 Yf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~--~~y----~~FL~~lFila~Gi~~LetaaNp~v~~lg~ 134 (422)
T COG0738 61 YFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS--KSY----GFFLVALFILASGIGLLETAANPYVTLLGK 134 (422)
T ss_pred HHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh--hhH----HHHHHHHHHHHhhhHHHHhccchHHHHhCC
Confidence 45678999999999999999999999999987654322221 222 12221 124444333333344777777
Q ss_pred cCCCCcccchhHHHHHHHHHHHHhhhccccccc
Q 013336 369 DSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA 401 (445)
Q Consensus 369 ~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~ 401 (445)
++ ....-|.+.+.++.++++++|++.+.++.
T Consensus 135 ~~--~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 135 PE--SAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred ch--hHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 64 34556899999999999999999887654
No 234
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.03 E-value=0.75 Score=47.97 Aligned_cols=16 Identities=19% Similarity=0.098 Sum_probs=13.5
Q ss_pred CcccchhHHHHHHHHH
Q 013336 373 GQGLAIGVLNLAIVIP 388 (445)
Q Consensus 373 ~~G~~~gi~n~~~~l~ 388 (445)
--|+||-++|+...+|
T Consensus 438 IGGTYMTLLNTvSNLG 453 (544)
T PF13000_consen 438 IGGTYMTLLNTVSNLG 453 (544)
T ss_pred cchHHHHHHHHHHhcC
Confidence 4599999999987775
No 235
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.94 E-value=0.031 Score=57.98 Aligned_cols=131 Identities=15% Similarity=0.065 Sum_probs=78.3
Q ss_pred hhhhhhhhhc----CchhhHH-HHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccceecchhHHHhhhhhccCCC
Q 013336 298 FLIEPMCRWI----GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKITYSVPFAITAELTADSGG 372 (445)
Q Consensus 298 ~i~~~l~~r~----g~r~l~~-~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~svP~aLls~~~~~~~~ 372 (445)
.+.|.++|.+ -|||.|+ ++.++.+++.+..+...... +.........+++.+|......+--+++.|....+.+
T Consensus 42 p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~-~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~ 120 (433)
T PF03092_consen 42 PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE-SSAAIAVVLLFLASFGYAFADVAADALVVELARREPE 120 (433)
T ss_pred hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc-chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc
Confidence 4566788886 3666666 47766655555444443211 1110000111122233333333445778888766544
Q ss_pred CcccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 373 GQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 373 ~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
.+|.-.+....+..++.+++..+.|++.+..+.+ ..|.+++.+.++..+.+.+..+|
T Consensus 121 ~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~--~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 121 SRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQ--GVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCe--EEehHHHHHHHHHHHHHHHhhhh
Confidence 4666666777777888899998999988876643 56888888777776666556665
No 236
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.74 E-value=0.037 Score=48.93 Aligned_cols=104 Identities=10% Similarity=0.085 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhH
Q 013336 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPF 360 (445)
Q Consensus 282 g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~ 360 (445)
|..++.+.-.+..+..++.|.+.+++|.|+..++|.+.+++-.+. .+.. +.+ ......++.|++ ...|+..
T Consensus 39 G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~----~~~---~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 39 GYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYP----NSY---TLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhh----hHH---HHHHHHHHHhhhhHHhhHhh
Confidence 444554434445566788899999999999999998888753332 2221 333 123334567777 4444442
Q ss_pred -HHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhc
Q 013336 361 -AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLG 395 (445)
Q Consensus 361 -aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~ 395 (445)
..+.++.+++ .+++..|++-.....+++++.+.
T Consensus 111 g~ylt~~s~~~--~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 111 GTYLTSYSTEE--TIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred hHHHHHcCCHH--HHhhHHHHHHHHHHHHHHHHHHH
Confidence 4455555443 45666666666666666665543
No 237
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=94.59 E-value=0.041 Score=57.62 Aligned_cols=55 Identities=18% Similarity=0.107 Sum_probs=45.6
Q ss_pred HhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhh
Q 013336 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFP 103 (445)
Q Consensus 47 ld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~ 103 (445)
..+.......|..+++.+.+|++++++..++.+...++|..+|..+|++ +.+.++
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~--l~~~~g 415 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVL--LMETIG 415 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHH--HHHHcC
Confidence 3444445667889999999999999999999999999999999999987 444443
No 238
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=94.14 E-value=0.073 Score=55.88 Aligned_cols=83 Identities=18% Similarity=0.233 Sum_probs=65.5
Q ss_pred HHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHH
Q 013336 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (445)
Q Consensus 46 lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~a 125 (445)
+..++....|+.+|+++++.+|++|++.-++++.+..-....+|+++-+.. .+. .++.|..+....
T Consensus 389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i--~~~------------tg~~r~g~~~l~ 454 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLI--TDA------------TGSQRYGFLFLL 454 (477)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH--HHH------------hCCchhHHHHHH
Confidence 356677788999999999999999999999999999999999999876652 222 136788888888
Q ss_pred HHHHHHHhheeeEeeccC
Q 013336 126 VFLTLCALVTIYFADEVP 143 (445)
Q Consensus 126 i~~~i~~~~t~~~v~E~p 143 (445)
+++++..++. ..+++++
T Consensus 455 ~lf~~gl~ll-~~v~~~~ 471 (477)
T PF11700_consen 455 VLFLIGLILL-FFVDVEK 471 (477)
T ss_pred HHHHHHHHHH-hhccchh
Confidence 8777776644 5666653
No 239
>PF12832 MFS_1_like: MFS_1 like family
Probab=93.99 E-value=0.15 Score=39.40 Aligned_cols=71 Identities=10% Similarity=0.057 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhh
Q 013336 233 VVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLV 312 (445)
Q Consensus 233 ~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l 312 (445)
.+.+..|+-..+..++..|.+.|..|. +-++ .+ +| ....+.-++.++.+.+.+.++||+++++.
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~~--Gl~~---------~~----iG-il~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQL--GLSP---------SQ----IG-ILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhhc--CCCH---------HH----HH-HHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 344455666667778888888777652 1121 12 22 22234556788889999999999999998
Q ss_pred HHHHHHH
Q 013336 313 WAISNFI 319 (445)
Q Consensus 313 ~~~g~~~ 319 (445)
.......
T Consensus 68 ~l~~~~~ 74 (77)
T PF12832_consen 68 ILLGSLF 74 (77)
T ss_pred HHHHHHH
Confidence 8864443
No 240
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=93.56 E-value=0.23 Score=51.58 Aligned_cols=106 Identities=19% Similarity=0.223 Sum_probs=73.8
Q ss_pred hhHHhhhcCCcccccccCCCccee--hhhHHHHHHHHhcc------------------ccccchhhHHHHhcCCCccc--
Q 013336 13 ADIGYILGDTKEHCSKFRGTRTRA--AFVFVIGFWLLDLA------------------NNTVQGPARALLADLSGPDQ-- 70 (445)
Q Consensus 13 ~~ig~~l~d~~~~~~~~~~~~~~~--i~~~v~g~~lld~s------------------~n~~~~p~~A~i~D~~p~~q-- 70 (445)
.-+|.+++|+= .|+||... .++.++|-.++..+ ....=+-...+++|..|+++
T Consensus 78 ~i~GG~laDr~-----LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr 152 (498)
T COG3104 78 PIIGGWLADRV-----LGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR 152 (498)
T ss_pred HHHHHHHHHHh-----cchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc
Confidence 34588888864 35665542 24445566655555 33344567889999999744
Q ss_pred hhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeE
Q 013336 71 RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYF 138 (445)
Q Consensus 71 r~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~ 138 (445)
|..++++.-+..++|.++++.+... +.+. ..++..|.++++-+.++++...+.
T Consensus 153 rD~gFt~fY~~iNiGsl~~p~i~~~--~~~~-------------~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 153 RDGGFTLFYMGINIGSLIAPIITGL--LAIN-------------YGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred cCCCccEEEEEeehHHHHHHHHHHH--HHHh-------------hCHHHHHHHHHHHHHHHHHHHHHc
Confidence 6778888888889999999988775 3332 258899999998888887765543
No 241
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=93.09 E-value=0.17 Score=51.47 Aligned_cols=83 Identities=18% Similarity=0.157 Sum_probs=66.0
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHH
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 124 (445)
.+..++....|+.+|+|++..+|+++-++.+++++...-....+|+.+-++ ..+. .++.|.-++..
T Consensus 349 ll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v--~t~i------------Tg~~r~g~~~i 414 (438)
T COG2270 349 LLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV--ITQI------------TGSSRAGVLSI 414 (438)
T ss_pred HHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH--HHHH------------hcchhhHHHHH
Confidence 457788889999999999999999999999999999999999999976654 2221 23677777777
Q ss_pred HHHHHHHHhheeeEeecc
Q 013336 125 VVFLTLCALVTIYFADEV 142 (445)
Q Consensus 125 ai~~~i~~~~t~~~v~E~ 142 (445)
.+++.+..+ .+..+|++
T Consensus 415 ~vll~iGl~-~L~~v~~~ 431 (438)
T COG2270 415 IVLLLIGLL-LLLRVKVP 431 (438)
T ss_pred HHHHHhhHh-hEEeecCC
Confidence 777777755 55567765
No 242
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.84 E-value=2.3 Score=44.60 Aligned_cols=54 Identities=13% Similarity=0.040 Sum_probs=43.7
Q ss_pred HHHHHHhccccccch-hhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccc
Q 013336 42 IGFWLLDLANNTVQG-PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (445)
Q Consensus 42 ~g~~lld~s~n~~~~-p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~ 95 (445)
+-++...+-.+...+ -..++..|++.+||-.|-.++.+...++|.++|..+...
T Consensus 133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~ 187 (472)
T TIGR00769 133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKY 187 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666666666 789999999999999999999999999999998765543
No 243
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=92.64 E-value=0.32 Score=50.14 Aligned_cols=96 Identities=11% Similarity=0.027 Sum_probs=58.3
Q ss_pred HHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee----ccccccc--eecchhHHHhhhh
Q 013336 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI----GANQAIK--ITYSVPFAITAEL 366 (445)
Q Consensus 293 ~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Gi~--~~~svP~aLls~~ 366 (445)
....-+..|++.||+|||++|...++++.+|.+++++-... +... ..+.+ -.++|++ -=+++--++.+|+
T Consensus 97 ti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~--~~~~--~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~ 172 (538)
T KOG0252|consen 97 TIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT--TSPL--GVMMTLCFFRFLLGIGIGGDYPLSATIMSES 172 (538)
T ss_pred HHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC--CCCc--chhhHHHHHHHHhhccccCCCcchHHHhhhh
Confidence 33446788999999999999999999998887644432211 1110 11222 2235555 3344455667777
Q ss_pred hccCCCCcccchhHHHHHHHHHHHHhhh
Q 013336 367 TADSGGGQGLAIGVLNLAIVIPQMIVSL 394 (445)
Q Consensus 367 ~~~~~~~~G~~~gi~n~~~~l~qii~~~ 394 (445)
.... .+|+.++..-.+..++++.++.
T Consensus 173 an~~--~RGa~iaavFa~Qg~GilaG~i 198 (538)
T KOG0252|consen 173 ANKK--TRGAFIAAVFAMQGFGILAGGI 198 (538)
T ss_pred hhhc--cccceeEEEEEecchhHhhccH
Confidence 7664 5677666666555566554443
No 244
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=92.32 E-value=1.7 Score=44.46 Aligned_cols=87 Identities=13% Similarity=0.163 Sum_probs=47.6
Q ss_pred cCchhhHHHHHHHHHHHHH--HHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccchhHHH
Q 013336 307 IGSRLVWAISNFIVFACMA--TTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLN 382 (445)
Q Consensus 307 ~g~r~l~~~g~~~~ai~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n 382 (445)
+.-|++|+.+.+-..-..+ ..+...+ ..+.| +.++++...|+. ..+.=-|..+.+..|++ ++.-.||...
T Consensus 304 ~rir~lwils~LQ~~nl~~~~l~s~~~f-ipsi~---ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~--~REFslg~vs 377 (402)
T PF02487_consen 304 FRIRRLWILSLLQVINLVFLLLQSWYRF-IPSIW---IVFVLIFYEGLLGGASYVNTFYRISEEVPPE--DREFSLGAVS 377 (402)
T ss_pred eehhhHHHHHHHHHHHHHHHHHHHHHHH-hhHHH---HHHHHHHHHHHhhhHHHHHHHHHHHhcCCHH--HHHHHHHHHH
Confidence 3457788875444332221 1111111 11332 333344445543 22222356677777765 5567789999
Q ss_pred HHHHHHHHHhhhccccc
Q 013336 383 LAIVIPQMIVSLGAGPW 399 (445)
Q Consensus 383 ~~~~l~qii~~~~~g~l 399 (445)
....++-.++++++-++
T Consensus 378 vsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 378 VSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHhhHHHHHHHHHHHHH
Confidence 99999988888765443
No 245
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=92.07 E-value=0.66 Score=47.51 Aligned_cols=182 Identities=9% Similarity=-0.016 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCc
Q 013336 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (445)
Q Consensus 230 ~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~ 309 (445)
....+|+-.|+.++ -|-..|.+.|+.+ |+.|-++++.+++-.-++.... +..-++...+.|.++.
T Consensus 6 ~~~llc~~gf~~~f--rPsEPfl~~yL~~------~~kn~T~~qv~~~i~Pv~tYSy-------l~~l~~vflltd~l~Y 70 (412)
T PF01770_consen 6 ITLLLCLFGFFKEF--RPSEPFLTPYLTG------PDKNFTEEQVNNEIYPVWTYSY-------LAFLLPVFLLTDYLRY 70 (412)
T ss_pred HHHHHHHHHHHHhc--CCCCccchHHHcC------CccCCCHHHHHHhhhhHHHHHH-------HHHHHHHHHHHHHhhh
Confidence 34456666666543 2777888887754 2223334444454322322222 2234445578899999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-ccccccc-eecchhHHHhhhhhccCCCCcccchhHHHHHHHH
Q 013336 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GANQAIK-ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 387 (445)
Q Consensus 310 r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~-~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l 387 (445)
|.+.+++.+...+....+.+.. +.. .+.+ -.+.|+. ....+-++.+=...|++ +.-+.-+....+.-+
T Consensus 71 kpviil~~~~~i~t~~lll~~~----sv~----~mq~~q~~yg~~~a~evay~sYiys~v~~~--~yq~vts~~raa~l~ 140 (412)
T PF01770_consen 71 KPVIILQALSYIITWLLLLFGT----SVL----AMQLMQFFYGLATAAEVAYYSYIYSVVDKE--HYQKVTSYTRAATLV 140 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHC----cHH----HHHHHHHHHHHHHHHHHHHHHHheeecCHH--HHHHHHHHHHHHHHH
Confidence 9999987665544443332222 211 1222 2345544 22222234443344443 344455777888888
Q ss_pred HHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccCCCCCCc
Q 013336 388 PQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSF 437 (445)
Q Consensus 388 ~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe~~~~~~ 437 (445)
+.+++++++..++..-+.+.....++.-....++.+ ..+++|..+-+.|
T Consensus 141 g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~-~~~fLP~~~~S~~ 189 (412)
T PF01770_consen 141 GRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALL-IALFLPMPKRSLF 189 (412)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHcCCCCcccc
Confidence 888888888777664443333333444333333444 4456776554444
No 246
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=91.47 E-value=0.95 Score=47.33 Aligned_cols=142 Identities=10% Similarity=-0.032 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCc-hhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGS-RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAI 362 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~-r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aL 362 (445)
....+++..++.+.+.+....|.+. |+.++.|.+++.++.+.-..+...+ +.+ .|..++.-.+.|++ ...++--+.
T Consensus 76 viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~-~~~-~y~mL~~R~l~Gvg~~n~a~lR~Y 153 (488)
T KOG2325|consen 76 VIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP-NGV-KYLMLVARILTGVGVGNFAVLRAY 153 (488)
T ss_pred HHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc-cch-HHHHHHHHHHcCcCcccHHHHHHH
Confidence 3335777888888888899988875 7788888888888876543343333 211 12233334467877 334333444
Q ss_pred hhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccc----cc--------ccCcchhHHHHHHHHHHHHHHhhheecc
Q 013336 363 TAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD----AL--------FGGGNIPAFVLASLSALAGGVVATLKLP 430 (445)
Q Consensus 363 ls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~----~~--------~g~~~~~~f~~~~v~~ll~~~~~~~~vp 430 (445)
++.....+ +|-+.++..+....++++++|.+...+. +. ++.. ...-++..++.+++.++..++.+
T Consensus 154 ~a~~s~~~--dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~Y-Tap~w~m~i~~i~~~v~i~~~f~ 230 (488)
T KOG2325|consen 154 IADASTVE--DRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMY-TAPAWLMAILWIIYIVIILFFFK 230 (488)
T ss_pred HHhccCcc--chHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEec-chHHHHHHHHHHHHHHHHHhhee
Confidence 55544333 4566677777778888888876432211 11 1221 23456777777777777766655
Q ss_pred C
Q 013336 431 H 431 (445)
Q Consensus 431 e 431 (445)
|
T Consensus 231 E 231 (488)
T KOG2325|consen 231 E 231 (488)
T ss_pred e
Confidence 4
No 247
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=91.35 E-value=3.4 Score=41.33 Aligned_cols=42 Identities=10% Similarity=0.078 Sum_probs=33.4
Q ss_pred cchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccc
Q 013336 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (445)
Q Consensus 54 ~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~ 95 (445)
+..+..+||-..+||++++++.+......-.|-.+|+.++-+
T Consensus 111 aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQl 152 (433)
T KOG3810|consen 111 AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQL 152 (433)
T ss_pred HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHH
Confidence 345678899999999999999999877777777777766654
No 248
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.18 E-value=2.3 Score=44.03 Aligned_cols=102 Identities=17% Similarity=0.119 Sum_probs=57.3
Q ss_pred HHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc---e-ecchh---HH
Q 013336 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK---I-TYSVP---FA 361 (445)
Q Consensus 289 ~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~---~-~~svP---~a 361 (445)
-++......++.+++.+|+|..|.=..|.....+|+...........+... ..-....+.|+. + ....+ .-
T Consensus 302 gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~--~~s~~~l~~gi~~SR~GLW~fDL~~~q 379 (432)
T PF06963_consen 302 GAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFS--SISAYLLLGGIALSRIGLWSFDLAVTQ 379 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCch--hhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 345556667888999999999988888877777665433322222111100 011112223433 1 11122 12
Q ss_pred HhhhhhccCCCCcccchhHHHHHHHHHHHHhhh
Q 013336 362 ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSL 394 (445)
Q Consensus 362 Lls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~ 394 (445)
++=|..|++ ++|+..|+.++...+-.++.-.
T Consensus 380 i~Qe~V~~~--~Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 380 IMQENVPES--ERGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred hhcccCCHH--HhhHHHHHHHHHHHHHHHHHHH
Confidence 333445554 6799889888888887776644
No 249
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=90.77 E-value=0.37 Score=48.97 Aligned_cols=105 Identities=8% Similarity=0.063 Sum_probs=70.3
Q ss_pred hhhhhhhhhhcC-----chhhHHH-HHHHHHHHHHHHHHhhhcccc-------ccCCcc--eeeeccccccc--eecchh
Q 013336 297 SFLIEPMCRWIG-----SRLVWAI-SNFIVFACMATTAIISVISVR-------EYSGGI--EHGIGANQAIK--ITYSVP 359 (445)
Q Consensus 297 s~i~~~l~~r~g-----~r~l~~~-g~~~~ai~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~Gi~--~~~svP 359 (445)
-...|..+|+-+ ||..|+. |.+.++.+...+.+....... ..+.+. ......++|++ ...+.-
T Consensus 31 R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~ 110 (403)
T PF03209_consen 31 RVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGTSF 110 (403)
T ss_pred HHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHHHH
Confidence 445678899988 8988885 777777766655554332211 110011 11112346665 444555
Q ss_pred HHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhccccccccc
Q 013336 360 FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF 403 (445)
Q Consensus 360 ~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~ 403 (445)
.||+++..|++ +|++..++.-++.-++-++.+.+.|.+.+-+
T Consensus 111 lALl~D~~~e~--~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 111 LALLADLAPEE--RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred HHHHHhcCCHh--hhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 79999999986 6789999999999999999999998766543
No 250
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=89.36 E-value=1.3 Score=45.65 Aligned_cols=137 Identities=12% Similarity=0.009 Sum_probs=83.8
Q ss_pred HHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHH
Q 013336 238 MALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISN 317 (445)
Q Consensus 238 ~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~ 317 (445)
+-++|..+.++.-|...|.+ + . +...|-.++|.++++...+..-++.||+|.|....++.
T Consensus 57 N~~qWI~ya~i~n~~~~~Yg------s-----------~---~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 57 NGMQWIQYAPINNYVNSFYG------S-----------S---SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred CcchheeehhHHHHHHHHhc------c-----------h---HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 44678888777766664433 2 1 23346667889999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhhccccccCCcceeee--cc-----ccccc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHH
Q 013336 318 FIVFACMATTAIISVISVREYSGGIEHGI--GA-----NQAIK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 388 (445)
Q Consensus 318 ~~~ai~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~Gi~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~ 388 (445)
....++...=. +.+.+ ... ...+ +. +.+.+ ....+|--+-+..+++++ +.+...+-...+.++
T Consensus 117 ~ln~iGa~Ir~-iss~p-~v~----~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q--ra~A~~~~v~~n~LG 188 (480)
T KOG2563|consen 117 VLNGIGAWIRL-ISSLP-FVP----PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ--RAIATVLGVMGNPLG 188 (480)
T ss_pred HHHHHHHHHhh-hccCc-ccc----ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch--hhhhhhHHHhcchHH
Confidence 88887654222 22111 000 1112 11 12222 233455455556667664 455556666666677
Q ss_pred HHHhhhcccccccc
Q 013336 389 QMIVSLGAGPWDAL 402 (445)
Q Consensus 389 qii~~~~~g~l~~~ 402 (445)
-.++-++-+.++..
T Consensus 189 vavg~llppilV~~ 202 (480)
T KOG2563|consen 189 VAVGFLLPPILVPS 202 (480)
T ss_pred HHHHhhccceecCC
Confidence 67777766666654
No 251
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=88.65 E-value=2 Score=41.00 Aligned_cols=101 Identities=9% Similarity=-0.015 Sum_probs=61.1
Q ss_pred HhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeee-ccccccc--eecchhHHHhhhhhccCCC
Q 013336 296 SSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGI-GANQAIK--ITYSVPFAITAELTADSGG 372 (445)
Q Consensus 296 ~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~--~~~svP~aLls~~~~~~~~ 372 (445)
.+++.|.+.|+.|.|.+..+|.+...+++..+.....-..... ..+.+.+ ..+.|.+ -.++.-..-..+.+|+
T Consensus 52 ~G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~-~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~--- 127 (250)
T PF06813_consen 52 FGILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSL-PVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR--- 127 (250)
T ss_pred ccHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCcc-chHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc---
Confidence 4678899999999999999999999888877766543211101 0111211 1122222 1222211222345564
Q ss_pred CcccchhHHHHHHHHHHHHhhhcccccc
Q 013336 373 GQGLAIGVLNLAIVIPQMIVSLGAGPWD 400 (445)
Q Consensus 373 ~~G~~~gi~n~~~~l~qii~~~~~g~l~ 400 (445)
+||+..|+.-.+..++-.+-+.+.-.+.
T Consensus 128 ~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 128 SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 5799999999999988766665554443
No 252
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=87.07 E-value=1.7 Score=43.76 Aligned_cols=91 Identities=15% Similarity=0.136 Sum_probs=69.5
Q ss_pred CcceehhhHHHHHHHHhccccccchhhHHHHhcCCCcc---chhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccch
Q 013336 32 TRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPD---QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSR 108 (445)
Q Consensus 32 ~~~~~i~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~---qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~ 108 (445)
++.+...+..+|..++-++....-+-..++++|..+++ +|.+.++|+=...++|..+++.+..+ .++-
T Consensus 28 ~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~--i~~~------- 98 (372)
T PF00854_consen 28 PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPY--IQQN------- 98 (372)
T ss_dssp ------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHC-------
T ss_pred hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchh--hccc-------
Confidence 34556788889999999999999999999999999875 46788899999999999999887765 2321
Q ss_pred hhhccccchhHHHHHHHHHHHHHHhheee
Q 013336 109 ACCAACGNLKAAFLVAVVFLTLCALVTIY 137 (445)
Q Consensus 109 ~~~~~~~~~~~~f~i~ai~~~i~~~~t~~ 137 (445)
..+.+.|.++++.++++++..+.
T Consensus 99 ------~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 99 ------YGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp ------S-HHHHHHHHHHHHHHHHHHHHC
T ss_pred ------cchhhhhhHHHHHHHHHHHHHHh
Confidence 36888999998888887765443
No 253
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.25 E-value=23 Score=36.93 Aligned_cols=49 Identities=16% Similarity=0.076 Sum_probs=37.1
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHh
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGF 90 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~ 90 (445)
.+=.++.++.......--.|+.+.++++...+..++.=.+...+.++|-
T Consensus 107 fssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Gg 155 (461)
T KOG3098|consen 107 FSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGG 155 (461)
T ss_pred HHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhh
Confidence 4455677777778888889999999998887777777666666666663
No 254
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=85.68 E-value=6.4 Score=39.97 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=26.7
Q ss_pred HHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccc
Q 013336 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (445)
Q Consensus 45 ~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~ 95 (445)
.+++|-+..=..+..+.-.-+..+|+-|-|+.-+ .+|.-.||.+|..
T Consensus 141 ~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q----~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 141 LLLNFLAATQDIAVDGWALTMLSRENLGYASTCQ----SVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHH----HHHHhhhHHhhcc
Confidence 3444444443445555556667778777777666 4555555555543
No 255
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=85.17 E-value=1.5 Score=44.35 Aligned_cols=124 Identities=17% Similarity=-0.016 Sum_probs=75.7
Q ss_pred HHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhHHHhhhhhccCCCC
Q 013336 295 VSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPFAITAELTADSGGG 373 (445)
Q Consensus 295 i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~aLls~~~~~~~~~ 373 (445)
+.|...+.+.|++|||+.+.+..+...+ .+++.-...|-+ ...++-++.|++ .-.++.-++=.|..|.. +
T Consensus 128 lga~~w~l~~d~~grr~~f~~T~l~t~v----~~~is~~spnf~---~L~~f~~l~~~g~gg~pv~~~~yle~lp~~--~ 198 (528)
T KOG0253|consen 128 VGAMVWGLSADTIGRRKGFNLTFLVTGV----FGVISGASPNFA---SLCVFRALWGFGVGGLPVDSAIYLEFLPSS--H 198 (528)
T ss_pred hhhhhhheehhhhhcchhhhhhHHHHHH----HHHhhcCCCCee---hhhHHHHHHhccCCCccHhHHHHHHhccCc--C
Confidence 4577888999999999998886555443 333332221311 122223344444 22455567778888987 4
Q ss_pred cccchhHHHHHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhhheeccC
Q 013336 374 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 431 (445)
Q Consensus 374 ~G~~~gi~n~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~~~~vpe 431 (445)
++.-+-+. .+-.++|+...++.=.++..+|- .+.+.+.++-..+.+++. +.+||
T Consensus 199 r~~~~V~~-~~waig~v~ea~law~vm~~~gw--r~~l~~~~~pl~~~a~f~-~w~~E 252 (528)
T KOG0253|consen 199 RWLLTVMS-FFWAIGQVFEALLAWGVMSNFGW--RYLLFTSSTPLMFAARFL-VWVYE 252 (528)
T ss_pred CCcchhHH-HHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHhHHHHHHHHH-hhccc
Confidence 56655555 77788999888776555665653 345555566555566644 56787
No 256
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=83.78 E-value=2 Score=45.38 Aligned_cols=46 Identities=15% Similarity=0.263 Sum_probs=38.8
Q ss_pred cccccchhhHHHHhcCCCccchhhHHHHHHH-HHHHhhHHHhccccc
Q 013336 50 ANNTVQGPARALLADLSGPDQRNSANAIFCS-WMAVGNILGFSAGAS 95 (445)
Q Consensus 50 s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~-~~~lG~~lG~~iG~~ 95 (445)
+..+++..+-+|++|++||+-|..+.++.+. ..|+|--+|.+||+.
T Consensus 472 t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~ 518 (618)
T KOG3762|consen 472 THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGF 518 (618)
T ss_pred HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhh
Confidence 3345678889999999999999999998765 458999999999987
No 257
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=83.45 E-value=32 Score=37.76 Aligned_cols=96 Identities=15% Similarity=0.139 Sum_probs=66.6
Q ss_pred ceehhhHHHHHHHHhccccccchhhHHHHhcCCCccc---hhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhh
Q 013336 34 TRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQ---RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRAC 110 (445)
Q Consensus 34 ~~~i~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~q---r~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~ 110 (445)
++...+..+|+.+...+...+-+...++..|..++++ |...+.|.-...++|++++..+-.+ ..+...-..
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~--l~~~~~~fg---- 155 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPI--LRGDVGCFG---- 155 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhcccc----
Confidence 3444556788889999999999999999999998643 6677888888888888888765543 221100000
Q ss_pred hccccchhHHHHHHHHHHHHHHhheee
Q 013336 111 CAACGNLKAAFLVAVVFLTLCALVTIY 137 (445)
Q Consensus 111 ~~~~~~~~~~f~i~ai~~~i~~~~t~~ 137 (445)
....+...|.+.++++++++++...
T Consensus 156 --~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 156 --CQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred --cCcchHHHHHHHHHHHHHHHHHHHH
Confidence 0024788999998888888765543
No 258
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=83.42 E-value=1.3 Score=41.29 Aligned_cols=110 Identities=20% Similarity=0.142 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhh
Q 013336 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITA 364 (445)
Q Consensus 287 ~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls 364 (445)
..+.+...+.+.+.+++.||.|||+.+..+...+.++.+...+... .+.+ ...+.....|+. .......++++
T Consensus 46 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~ 120 (338)
T COG0477 46 SAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN--VGLA---LLLILRLLQGLGGGGLLPVASALLS 120 (338)
T ss_pred HHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc--chHH---HHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3444555555688999999999998888777654444333333321 0011 011111124544 34555678888
Q ss_pred hhhccCCCCcccchhHHHH-HHHHHHHHhhhcccccccc
Q 013336 365 ELTADSGGGQGLAIGVLNL-AIVIPQMIVSLGAGPWDAL 402 (445)
Q Consensus 365 ~~~~~~~~~~G~~~gi~n~-~~~l~qii~~~~~g~l~~~ 402 (445)
+..|+ .+.++...++... ...++.++++.+.+.+...
T Consensus 121 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 121 EWFPE-ATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88886 1146777788887 5777888888666655443
No 259
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=82.54 E-value=4.4 Score=44.34 Aligned_cols=136 Identities=9% Similarity=-0.072 Sum_probs=72.9
Q ss_pred HHHHHHHHhhhhhhhhhh-cCchhhHHHHHHHHHHHHHHHHHhhhccccccC-Ccceeeeccc--cccceecchhHHHhh
Q 013336 289 NSVVLGVSSFLIEPMCRW-IGSRLVWAISNFIVFACMATTAIISVISVREYS-GGIEHGIGAN--QAIKITYSVPFAITA 364 (445)
Q Consensus 289 ~~i~~~i~s~i~~~l~~r-~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~Gi~~~~svP~aLls 364 (445)
+...+-+..++.+.+.|+ +|+++...++.++..+++.++++.......... ....++.+++ .|.+..-+..-++.+
T Consensus 32 f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~g 111 (654)
T TIGR00926 32 FTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGG 111 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhH
Confidence 344455668888899987 599999999988888887665543211000000 0001111222 333322333347778
Q ss_pred hhhccCC-CCcccchhHHHHHHHHHHHHhhhccccccccc---cCc--chhHHHHHHHHHHHHHHh
Q 013336 365 ELTADSG-GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF---GGG--NIPAFVLASLSALAGGVV 424 (445)
Q Consensus 365 ~~~~~~~-~~~G~~~gi~n~~~~l~qii~~~~~g~l~~~~---g~~--~~~~f~~~~v~~ll~~~~ 424 (445)
+..++++ +.+-..+.++..++.++.++++.+.+.+.+.. |.. ....|.+.+++++++.+.
T Consensus 112 dqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 112 DQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 7776432 22444555666666666666666666665332 210 123566666666665544
No 260
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=81.96 E-value=28 Score=36.72 Aligned_cols=48 Identities=10% Similarity=0.104 Sum_probs=35.9
Q ss_pred HHhccccccch-hhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccc
Q 013336 46 LLDLANNTVQG-PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG 93 (445)
Q Consensus 46 lld~s~n~~~~-p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG 93 (445)
+-..--+...+ -...+..|+++.+|-.|-.+..+...++|.+++-.+-
T Consensus 152 ~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~ 200 (491)
T PF03219_consen 152 MAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLT 200 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444 4788999999999999999999888888888755443
No 261
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=80.96 E-value=3.9 Score=39.52 Aligned_cols=124 Identities=15% Similarity=0.064 Sum_probs=58.8
Q ss_pred HHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecc-hhHHHhhhhhc
Q 013336 292 VLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYS-VPFAITAELTA 368 (445)
Q Consensus 292 ~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~s-vP~aLls~~~~ 368 (445)
.++++..+.+.++||-|||+-.+.=++...+| .+.... ..|- +.++--.+-|+. ...+ .--=++.|..+
T Consensus 84 SsmLFGtivgSLaDkqGRKracvtycitYiLs----CiTKhS--pqYk--VLmVGR~LGGiaTsLLFSaFEsWliaEHne 155 (454)
T KOG4332|consen 84 SSMLFGTIVGSLADKQGRKRACVTYCITYILS----CITKHS--PQYK--VLMVGRVLGGIATSLLFSAFESWLIAEHNE 155 (454)
T ss_pred hHHHHHHHHHHHHhhhccccceeeehHHHHHH----HHhhcC--CceE--EEeehhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 45567788889999999998876533333332 223322 2231 223333445555 2222 11123444432
Q ss_pred cCCCCcccchhHHHHHHHHHHHHhhhccc----cccccccCcchhHHHHHHHHHHHHHH
Q 013336 369 DSGGGQGLAIGVLNLAIVIPQMIVSLGAG----PWDALFGGGNIPAFVLASLSALAGGV 423 (445)
Q Consensus 369 ~~~~~~G~~~gi~n~~~~l~qii~~~~~g----~l~~~~g~~~~~~f~~~~v~~ll~~~ 423 (445)
+..-.+-..-.-+.=+.++++=+.+.+.| .+++.++-.+...|-.++++..++..
T Consensus 156 kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmA 214 (454)
T KOG4332|consen 156 KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMA 214 (454)
T ss_pred ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHH
Confidence 21101112223333444455544444333 46666665555556666655444433
No 262
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=78.87 E-value=2.2 Score=45.03 Aligned_cols=113 Identities=14% Similarity=0.096 Sum_probs=67.9
Q ss_pred hhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc--eecchhHHHhhhhhccCCCCcccc
Q 013336 300 IEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK--ITYSVPFAITAELTADSGGGQGLA 377 (445)
Q Consensus 300 ~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~~~~~G~~ 377 (445)
..++++|+|+-++..+++..+++=++...+.. |.| .++-+=.+.|+. ...+.--+.++...|+.. +.+.
T Consensus 426 s~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~----n~W---~vLPieilqgit~aliWaa~~sY~s~vaPp~l--~at~ 496 (618)
T KOG3762|consen 426 SFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ----NPW---MVLPIEILQGITHALIWAAIISYASHVAPPGL--RATA 496 (618)
T ss_pred HHHHHHHhcccceeeehhhHHHHHHHHHHHhc----Cch---heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc--hHHH
Confidence 45788999999998888887776555444333 544 233333446654 222222344566666642 2333
Q ss_pred hhHHH-HHHHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHH
Q 013336 378 IGVLN-LAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 423 (445)
Q Consensus 378 ~gi~n-~~~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~ 423 (445)
-|++. .+..++-=++++++|.+++.+|. ...|..+++.+++..+
T Consensus 497 Q~l~~g~f~GlG~g~GslIGG~~v~~fg~--~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 497 QGLLQGIFHGLGKGLGSLIGGFVVERFGA--RTTFRIFGIACLVTLA 541 (618)
T ss_pred HHHHHHHhcccCcchhhhhhhhhheeehh--HHHHHHHHHHHHHHHH
Confidence 33332 33456666789999999998885 3567777776666444
No 263
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=76.71 E-value=88 Score=31.51 Aligned_cols=91 Identities=16% Similarity=0.105 Sum_probs=48.1
Q ss_pred hHHHHHHHHhccccccchhhHHHHhcCC-----CccchhhHHHHHH-HHHHHhhHHHhccccccchhhhhhcccchhhhc
Q 013336 39 VFVIGFWLLDLANNTVQGPARALLADLS-----GPDQRNSANAIFC-SWMAVGNILGFSAGASGSWHRWFPFLTSRACCA 112 (445)
Q Consensus 39 ~~v~g~~lld~s~n~~~~p~~A~i~D~~-----p~~qr~~a~~~~~-~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~ 112 (445)
+..+|=++-.++.....++..+.+.-.- |+|..+.-++.++ ..+++=+++.-+++.. ..+.+
T Consensus 123 ~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~--l~~~~---------- 190 (354)
T PF05631_consen 123 VLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANV--LADWF---------- 190 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHH--HHHHh----------
Confidence 4447778888888888999888775332 3333333333333 1122222222222211 11111
Q ss_pred cccchhHHHHHHHHHHHHHHhheeeEeecc
Q 013336 113 ACGNLKAAFLVAVVFLTLCALVTIYFADEV 142 (445)
Q Consensus 113 ~~~~~~~~f~i~ai~~~i~~~~t~~~v~E~ 142 (445)
+..-..+|..++++++++.++....=+|.
T Consensus 191 -~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 191 -GFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 12347789888888887776554444453
No 264
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=73.94 E-value=10 Score=37.10 Aligned_cols=54 Identities=15% Similarity=0.052 Sum_probs=47.1
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccc
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~ 95 (445)
.+..++.+|-..........++-++|++|-|++.+..+...++|-.+-+.+.++
T Consensus 357 ~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~ 410 (459)
T KOG4686|consen 357 TSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGF 410 (459)
T ss_pred HHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhe
Confidence 566677777777777778888999999999999999999999999999988887
No 265
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=63.90 E-value=15 Score=36.89 Aligned_cols=112 Identities=9% Similarity=-0.044 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccccc---cCCcceeeeccccccc--eecchhHHHhhhhhccC-CCCcccchhHHHHH
Q 013336 311 LVWAISNFIVFACMATTAIISVISVRE---YSGGIEHGIGANQAIK--ITYSVPFAITAELTADS-GGGQGLAIGVLNLA 384 (445)
Q Consensus 311 ~l~~~g~~~~ai~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Gi~--~~~svP~aLls~~~~~~-~~~~G~~~gi~n~~ 384 (445)
|...+|.++..++++.+.+..... .. .......+.+.+++++ ..-+.--+++++.++++ ++.+-..+..+...
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~-~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPP-SLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSS-SC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcc-hhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 345566777777766544443221 11 0000011112222333 33333346788888865 34556667788888
Q ss_pred HHHHHHHhhhccccccccccCcchhHHHHHHHHHHHHHHhh
Q 013336 385 IVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 425 (445)
Q Consensus 385 ~~l~qii~~~~~g~l~~~~g~~~~~~f~~~~v~~ll~~~~~ 425 (445)
+.++-+++....+.+.+..|. ...|.+.++..+++.+..
T Consensus 81 in~G~~~~~~~~~~i~~~~~~--~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGW--FLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-H--HHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhcccchhhccccch--hhhhhHHHHHHHHHHHHH
Confidence 899999998888888877664 346778777777766544
No 266
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=60.60 E-value=20 Score=36.73 Aligned_cols=39 Identities=28% Similarity=0.238 Sum_probs=30.7
Q ss_pred ceehhhHHHHHHHHhccccccchhhHHHHhcCCCccchh
Q 013336 34 TRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRN 72 (445)
Q Consensus 34 ~~~i~~~v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~ 72 (445)
.+.-+++.+.+++++++....|+....+.++..++--|+
T Consensus 114 ~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqa 152 (406)
T KOG1479|consen 114 NGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQA 152 (406)
T ss_pred chhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHH
Confidence 344567888899999999999999999999886554443
No 267
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=58.96 E-value=27 Score=26.80 Aligned_cols=56 Identities=14% Similarity=0.154 Sum_probs=38.0
Q ss_pred chhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeeccCCCC
Q 013336 70 QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTV 146 (445)
Q Consensus 70 qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E~p~~~ 146 (445)
-|.++.-+......++++++.++|.+ . .+++..+++.++-.+++++ +.+|+-|...
T Consensus 5 gQ~~ae~l~~~il~~~~iisfi~Gy~--~----------------q~~~~~~~~~~~g~~~~~l---v~vP~Wp~y~ 60 (76)
T PF06645_consen 5 GQRLAEKLMQYILIISAIISFIVGYI--T----------------QSFSYTFYIYGAGVVLTLL---VVVPPWPFYN 60 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--H----------------HHHHHHHHHHHHHHHHHHh---heeCCcHhhc
Confidence 35567778888888888998888854 1 2567777776665555544 4578776543
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=58.61 E-value=17 Score=37.75 Aligned_cols=39 Identities=8% Similarity=-0.155 Sum_probs=22.7
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHH
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMAT 326 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~ 326 (445)
...+..++..+...++..|+..|.-...++++..+.++.
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~ 91 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVIL 91 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHH
Confidence 344455566666677778887754555565544444433
No 269
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=57.75 E-value=16 Score=38.36 Aligned_cols=103 Identities=5% Similarity=0.003 Sum_probs=64.6
Q ss_pred HHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhcccccc----------------------------CCcceeee
Q 013336 295 VSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREY----------------------------SGGIEHGI 346 (445)
Q Consensus 295 i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~----------------------------~~~~~~~~ 346 (445)
++..+-.++++|++|++++-+-...+...+++.+++-. +..+. ......++
T Consensus 59 ~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~-p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~ 137 (472)
T TIGR00769 59 IFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIY-PLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVM 137 (472)
T ss_pred HHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHh-cchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHH
Confidence 33555678999999999988877777776665554411 10110 00000011
Q ss_pred ccccccceecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccc
Q 013336 347 GANQAIKITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 400 (445)
Q Consensus 347 ~~~~Gi~~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~ 400 (445)
.-+.|..+...+=|+...|..+.+ ...+.++++.....++.++++.+...+.
T Consensus 138 ~elw~~~vvS~lFW~fandi~t~~--qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 138 AELWGSVVLSLLFWGFANQITTID--EAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111221112225578889998875 5688999999999999999987766654
No 270
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=55.60 E-value=10 Score=37.24 Aligned_cols=45 Identities=9% Similarity=-0.042 Sum_probs=35.0
Q ss_pred eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccc
Q 013336 354 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 400 (445)
Q Consensus 354 ~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~ 400 (445)
...+.-.++++..-+++ ++.+.+++.+.++.++.+++|++.+.+.
T Consensus 26 ~lq~~~n~~v~~~~~~~--~~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 26 ILQVAANPYVSILGPIE--TAASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred HHHhhHHHHHHHHCCcc--hHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33444446677777765 5788899999999999999999998766
No 271
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=54.16 E-value=74 Score=30.61 Aligned_cols=25 Identities=12% Similarity=0.265 Sum_probs=15.9
Q ss_pred ccchhHHHHHHHHHHHHHHhheeeE
Q 013336 114 CGNLKAAFLVAVVFLTLCALVTIYF 138 (445)
Q Consensus 114 ~~~~~~~f~i~ai~~~i~~~~t~~~ 138 (445)
..+|++++.+.+++.++.+++-.++
T Consensus 37 ~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 37 TNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3578888887777665555544433
No 272
>PRK03612 spermidine synthase; Provisional
Probab=52.15 E-value=27 Score=37.20 Aligned_cols=34 Identities=12% Similarity=-0.056 Sum_probs=26.8
Q ss_pred CcccchhHHHHHHHHHHHHhhhccccc-cccccCc
Q 013336 373 GQGLAIGVLNLAIVIPQMIVSLGAGPW-DALFGGG 406 (445)
Q Consensus 373 ~~G~~~gi~n~~~~l~qii~~~~~g~l-~~~~g~~ 406 (445)
+.|...|-...++.++-++++++.+.+ +..+|..
T Consensus 142 ~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~ 176 (521)
T PRK03612 142 HLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLI 176 (521)
T ss_pred chhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchH
Confidence 357778889999999999999998864 4567754
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=51.05 E-value=56 Score=33.88 Aligned_cols=81 Identities=10% Similarity=-0.015 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~g 308 (445)
+..+++++.||++-.+-=...+-.+.|+.+ +|.++= . -.+.+|+ .-++...+.+-..|.++||..
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~-i~p~sL--------l-----~~siygl-~~~~~~~~f~~~vG~~iD~~~ 66 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLIS-IFPGSL--------L-----PVSIYGL-VRSLSAILFGPWVGRWIDRSP 66 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCc--------H-----HHHHHHH-HHHHHHHHhhHHHHHHHhCCc
Confidence 345678888988766655555555666655 665430 0 1233444 445667778888999999999
Q ss_pred chhhHHHHHHHHHHHH
Q 013336 309 SRLVWAISNFIVFACM 324 (445)
Q Consensus 309 ~r~l~~~g~~~~ai~~ 324 (445)
|.+..-.+.+..-++.
T Consensus 67 Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 67 RLKVIRTSLVVQNLSV 82 (432)
T ss_pred chhhHHHHHHHHHHHH
Confidence 9888766655554443
No 274
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=50.64 E-value=41 Score=32.13 Aligned_cols=66 Identities=14% Similarity=0.225 Sum_probs=39.9
Q ss_pred HhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHHHHHHHHHHHHHHhheeeEeec
Q 013336 62 LADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADE 141 (445)
Q Consensus 62 i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~ai~~~i~~~~t~~~v~E 141 (445)
-....| ++||++.++.....|+++.+=..+-.. .++ ++..+....++....+++++ ..+++++
T Consensus 121 ~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~-----~f~----------~~~~~fll~la~~~~~v~l~-~~~~vr~ 183 (250)
T PF06813_consen 121 CVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSA-----FFG----------DDPSSFLLFLAVLPAVVCLV-AMFFVRP 183 (250)
T ss_pred HHHhCc-cccCceehhhhHHHHhHHHHHHHHHHH-----HcC----------CChHHHHHHHHHHHHHHHHH-Hhhheec
Confidence 335555 689999999999999988775443322 221 12344455555555555544 5556776
Q ss_pred cCC
Q 013336 142 VPL 144 (445)
Q Consensus 142 ~p~ 144 (445)
.|.
T Consensus 184 ~~~ 186 (250)
T PF06813_consen 184 VPP 186 (250)
T ss_pred cCC
Confidence 553
No 275
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=48.52 E-value=41 Score=26.75 Aligned_cols=26 Identities=23% Similarity=0.383 Sum_probs=21.8
Q ss_pred chhhHHHHHHHHHHHhhHHHhccccc
Q 013336 70 QRNSANAIFCSWMAVGNILGFSAGAS 95 (445)
Q Consensus 70 qr~~a~~~~~~~~~lG~~lG~~iG~~ 95 (445)
-|+++--+......+|+++|++.|..
T Consensus 20 gQkkaEr~~q~ilti~aiVg~i~Gf~ 45 (101)
T KOG4112|consen 20 GQKKAERFQQLILTIGAIVGFIYGFA 45 (101)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678889999999999999988853
No 276
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=46.64 E-value=15 Score=38.18 Aligned_cols=151 Identities=11% Similarity=0.055 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhh--
Q 013336 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW-- 306 (445)
Q Consensus 229 ~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r-- 306 (445)
+.+..++.+.+--+++|..-..|.|.|+.+ + |-|++ .... .+. +-=+...++.-+.|..+||
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-l--Gvphk-------~~S~-iw~-----~gPi~G~~vQP~vG~~SDrc~ 95 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-L--GVPHK-------WSSI-IWL-----CGPLSGLLVQPLVGSASDRCT 95 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-c--CCCcc-------cccc-ccc-----ccccccceecccccccccccc
Confidence 345556777777888999999999999876 2 33331 1111 111 1122334455555666664
Q ss_pred --cCchhhHHH-HHHHHHHHHHHHHHhhhc----cccccC-Ccceeeeccccccc----eecc--hh-HHHhhhhhccCC
Q 013336 307 --IGSRLVWAI-SNFIVFACMATTAIISVI----SVREYS-GGIEHGIGANQAIK----ITYS--VP-FAITAELTADSG 371 (445)
Q Consensus 307 --~g~r~l~~~-g~~~~ai~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~Gi~----~~~s--vP-~aLls~~~~~~~ 371 (445)
+||||.++. +.+..++++..+++..-. ..+... ...-.+...++|+- ..++ -| -|++++...++.
T Consensus 96 sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~ 175 (498)
T KOG0637|consen 96 SRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA 175 (498)
T ss_pred cccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh
Confidence 899999885 666666766665554311 101110 00011112234433 1111 12 466777765442
Q ss_pred C-CcccchhHHHHHHHHHHHHhhhccc
Q 013336 372 G-GQGLAIGVLNLAIVIPQMIVSLGAG 397 (445)
Q Consensus 372 ~-~~G~~~gi~n~~~~l~qii~~~~~g 397 (445)
+ ++ .++.+..++.+++.++=+.++
T Consensus 176 ~~~~--Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 176 KKTR--ANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hhhc--cchhHHHHHHhcceeeeeccc
Confidence 2 22 789999999999988866554
No 277
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=45.17 E-value=7.4 Score=41.61 Aligned_cols=110 Identities=14% Similarity=-0.012 Sum_probs=1.3
Q ss_pred HHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccC----------------------------
Q 013336 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYS---------------------------- 339 (445)
Q Consensus 288 ~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~---------------------------- 339 (445)
.|-+...+..++..++.+|..|-|.+-+|.++++++.+..++-.+.. ..|.
T Consensus 46 ~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~-~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 124 (539)
T PF03137_consen 46 SYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLS-GPYSYEEASNSNGNSSISSNLCDSSSSSQASS 124 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhc-CCCccccccccccccccccccccccccccccC
Confidence 46666667777777777776666666689999999887665432221 1110
Q ss_pred --------------Ccceeee--ccccccceecchhHHHhhhhhccC--CCCcccchhHHHHHHHHHHHHhhhcccccc
Q 013336 340 --------------GGIEHGI--GANQAIKITYSVPFAITAELTADS--GGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 400 (445)
Q Consensus 340 --------------~~~~~~~--~~~~Gi~~~~svP~aLls~~~~~~--~~~~G~~~gi~n~~~~l~qii~~~~~g~l~ 400 (445)
.+..+++ ..+.|++ .+-.|+|-..|++++ ++..+.|+|++..+..++-.++-++++...
T Consensus 125 ~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG--~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 125 DCQDCCSSSSSSLSGYFYVFILGQLLIGIG--ATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ---------------------------SSS-------------------------------------------------
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcc--ccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHH
Confidence 0001111 1234444 121244444455433 246799999999999999988877776543
No 278
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=40.57 E-value=47 Score=35.39 Aligned_cols=28 Identities=7% Similarity=0.285 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCch
Q 013336 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSR 310 (445)
Q Consensus 283 ~~~l~~~~i~~~i~s~i~~~l~~r~g~r 310 (445)
..++++|.+.+.+.+++.+++-+.++.|
T Consensus 300 t~~i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 300 TAAIILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 3566788899999999999999988654
No 279
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.23 E-value=1.4e+02 Score=24.67 Aligned_cols=49 Identities=12% Similarity=-0.079 Sum_probs=30.1
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhhhc-CchhhHHHHHHHHHHH
Q 013336 270 HEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI-GSRLVWAISNFIVFAC 323 (445)
Q Consensus 270 ~~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~r~-g~r~l~~~g~~~~ai~ 323 (445)
+..+.|.++++.. .--|.+.+....+|++.||+ |-+.+.++..++.+.|
T Consensus 37 ~s~k~~~~a~kls-----sefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 37 ESIKGYAQAFKLS-----SEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred hhhhhhhhhHHHH-----HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 3455677766543 12245556788899999998 5565555555555443
No 280
>KOG3787 consensus Glutamate/aspartate and neutral amino acid transporters [Amino acid transport and metabolism]
Probab=32.72 E-value=1.9e+02 Score=30.07 Aligned_cols=51 Identities=20% Similarity=0.354 Sum_probs=25.2
Q ss_pred hhhccccccceeeecCCCCC---CCh--hhHHHHHHhhHHHHHHHHHHHHHHHHhhhhhhhhh
Q 013336 248 FFLFDTDWMGREVYHGDPKG---NDH--EVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (445)
Q Consensus 248 ~~~y~t~~v~~~if~g~p~~---~s~--~~~~y~~gv~~g~~~l~~~~i~~~i~s~i~~~l~~ 305 (445)
|..|.|.|.... +.+|.. +.. ....|.+|.++ +|++.|++ .+.++++++-+
T Consensus 157 f~q~~T~y~~~~--~~~~~~~t~~~~~~~~~~~~~GmNv--LGlVvF~~---~fGivig~lG~ 212 (507)
T KOG3787|consen 157 FQQYQTKYKPVT--KASPGNATEEALPKGVPGYTDGMNV--LGLVVFCI---VFGIVIGKLGE 212 (507)
T ss_pred HHHHeeEEEeec--ccCCCCccccccccCccccccCccc--hhHHHHHH---HHHHHHHhhcc
Confidence 566778776432 112221 111 12357778765 67765543 34444544443
No 281
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=32.41 E-value=1.2e+02 Score=26.19 Aligned_cols=28 Identities=14% Similarity=0.092 Sum_probs=20.4
Q ss_pred HHHhcCCCccchhhHHHHHHHHHHHhhH
Q 013336 60 ALLADLSGPDQRNSANAIFCSWMAVGNI 87 (445)
Q Consensus 60 A~i~D~~p~~qr~~a~~~~~~~~~lG~~ 87 (445)
.=+-|++||.+|..+.+..+......--
T Consensus 56 ~ALkDm~Pp~~R~~i~~~~s~t~s~~ks 83 (145)
T TIGR00986 56 YALKDIVPPTTRGWIYHKYSTTTNFVKS 83 (145)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467999999999888877665554333
No 282
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=29.57 E-value=1.5e+02 Score=25.58 Aligned_cols=29 Identities=21% Similarity=0.122 Sum_probs=20.7
Q ss_pred HHhcCCCccchhhHHHHHHHHHHHhhHHH
Q 013336 61 LLADLSGPDQRNSANAIFCSWMAVGNILG 89 (445)
Q Consensus 61 ~i~D~~p~~qr~~a~~~~~~~~~lG~~lG 89 (445)
=+-|++||..|....+..+.......-+.
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~~~ 87 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKSLF 87 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999988887765554433333
No 283
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=29.29 E-value=61 Score=33.63 Aligned_cols=54 Identities=22% Similarity=0.322 Sum_probs=45.1
Q ss_pred HHHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhcccc
Q 013336 41 VIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA 94 (445)
Q Consensus 41 v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~ 94 (445)
++-..++.++..-..+-+..|-++.+++++|..+..+.+++..+|..+|..++-
T Consensus 376 ~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 376 IILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566777777777888899999999999999999999999999999887663
No 284
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=29.28 E-value=2.5e+02 Score=27.02 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHH
Q 013336 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVF 321 (445)
Q Consensus 285 ~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~a 321 (445)
+.+.+++++.+.-+-...++.|+..|++.++|.++|-
T Consensus 245 ~~iGH~lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi 281 (294)
T KOG2881|consen 245 AIIGHALCTGLAVIGGKYLASKISVRTVTLIGGILFI 281 (294)
T ss_pred cHHHHHHHHHHHHhhhHHHhhhheeEEEEEecchhHH
Confidence 4444555555555555568899999988887655553
No 285
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=27.69 E-value=72 Score=32.75 Aligned_cols=47 Identities=13% Similarity=0.056 Sum_probs=38.9
Q ss_pred ccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccc
Q 013336 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (445)
Q Consensus 49 ~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~ 95 (445)
+.-.+.+.-....+.|..|+|+|..+++..+...++|.+++-++|-.
T Consensus 347 LlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 347 LLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred HhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 33445566667788899999999999999999999999999888753
No 286
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=27.34 E-value=75 Score=29.02 Aligned_cols=48 Identities=23% Similarity=0.140 Sum_probs=38.2
Q ss_pred hccccccchhhHHHHhcCCCc-cchhhHHHHHHH-HHHHhhHHHhccccc
Q 013336 48 DLANNTVQGPARALLADLSGP-DQRNSANAIFCS-WMAVGNILGFSAGAS 95 (445)
Q Consensus 48 d~s~n~~~~p~~A~i~D~~p~-~qr~~a~~~~~~-~~~lG~~lG~~iG~~ 95 (445)
.++.+.......+++.|..|+ ++|+...+.... ...+|.++++.+++.
T Consensus 105 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T COG0477 105 GLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGL 154 (338)
T ss_pred HhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556677899999999998 788888888888 578888888876665
No 287
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=25.85 E-value=2.7e+02 Score=21.76 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=29.3
Q ss_pred HHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhh
Q 013336 292 VLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (445)
Q Consensus 292 ~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~ 331 (445)
.-.+.++...++.++.++|+.+..+.+..+++++.+++..
T Consensus 39 GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 39 GYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344555666777877888888889888888877777664
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=24.71 E-value=26 Score=34.39 Aligned_cols=297 Identities=10% Similarity=0.000 Sum_probs=0.0
Q ss_pred HHHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhhhcccchhhhccccchhHH
Q 013336 41 VIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAA 120 (445)
Q Consensus 41 v~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (445)
++-++++.++....|+...++.+..-|.-.|....|- ++++++..++--+ +-........-...
T Consensus 1 m~~v~~~~~~~~~~q~s~~glas~~p~~y~~a~~~Gq-----~~aGv~~s~l~ii-----------~~~~~~~~~~~a~~ 64 (309)
T PF01733_consen 1 MISVALIGFANAVLQSSLFGLASLFPPKYTQAVMIGQ-----GLAGVIVSLLRII-----------TKASGSDVKTSAFI 64 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEEEHhhhHHHhccHHHHHhcCCHHHHHHHHhhc-----cHHHHHHHHHHHH-----------HHHhhhccchhhhh
Q ss_pred HHHHHHHHHHHHhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhccc
Q 013336 121 FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISK 200 (445)
Q Consensus 121 f~i~ai~~~i~~~~t~~~v~E~p~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (445)
|+..+.+..+..++....++-.|..+...++..++ +....+|...+..+.
T Consensus 65 yF~~a~~i~i~~~~~~~~l~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~ 114 (309)
T PF01733_consen 65 YFIIAVLIVILCIILYFILPRSPFYRYYLEREAKG------------------------------DERETEEELSSDGEE 114 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhccChHHHHHHhhhccc------------------------------chhhhhhhhhhhccc
Q ss_pred cccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhccccccceeeecCCCCCCChhhHHHHHHhh
Q 013336 201 KAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 280 (445)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~l~~f~~~~g~~~~~~y~t~~v~~~if~g~p~~~s~~~~~y~~gv~ 280 (445)
+.+++.+...++.+....+.+..++..=+..+..++..++..+.-.....=.+.-+.. .+.++ ....=
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~~f~vTl~~FP~it~~v~s-~~~~~-----------~~~~f 182 (309)
T PF01733_consen 115 ESESRSEGTFENSKPQEENVFISFWVVLKKIWPYALSIFLVFFVTLSVFPGITSAVQS-SNNPD-----------WSSYF 182 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHhheeeeccceeeeeec-cccCC-----------CccHH
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHh---------hhccccccCCcceeeeccccc
Q 013336 281 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII---------SVISVREYSGGIEHGIGANQA 351 (445)
Q Consensus 281 ~g~~~l~~~~i~~~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~G 351 (445)
.-....++|++..++.-.+..+..-+..+++...+..+.=.+......+. ....++++. .+++..++|
T Consensus 183 ~pv~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~---~~i~~~l~g 259 (309)
T PF01733_consen 183 VPVVLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAW---FIILMLLFG 259 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHH---HHHHHHHHH
Q ss_pred cc--eecchhHHHhhhhhccCCCCcccchhHHHHHHHHHHHHhhhcccccc
Q 013336 352 IK--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 400 (445)
Q Consensus 352 i~--~~~svP~aLls~~~~~~~~~~G~~~gi~n~~~~l~qii~~~~~g~l~ 400 (445)
+. -..++.+....+..+++ ++-..-.+.+.+..+|-.+++.+.=.+.
T Consensus 260 ~TNGyl~tl~m~~~p~~v~~~--e~e~aG~~~~~~L~~Gl~~Gs~ls~~~~ 308 (309)
T PF01733_consen 260 FTNGYLSTLAMMYAPKSVSPE--ERELAGSVMSFFLSFGLFIGSVLSFLLV 308 (309)
T ss_dssp -------HHHH----------------------------------------
T ss_pred HccchhhhceeeeCCCcCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 289
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.71 E-value=89 Score=32.70 Aligned_cols=91 Identities=10% Similarity=-0.024 Sum_probs=52.1
Q ss_pred HHHhhhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHhhhccccccCCcceeeeccccccc-eecchhH-HHhhhhhccCC
Q 013336 294 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK-ITYSVPF-AITAELTADSG 371 (445)
Q Consensus 294 ~i~s~i~~~l~~r~g~r~l~~~g~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~~svP~-aLls~~~~~~~ 371 (445)
.++.+..|.+.+++|.|...++|...+++..++..+. |.| ....-.++.|++ .+.|.-+ ..++++.+++
T Consensus 64 tv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-----N~y---~~yfssallG~Gaallw~GqG~ylt~~st~~- 134 (461)
T KOG3098|consen 64 TVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-----NSY---YLYFSSALLGFGAALLWTGQGGYLTSNSTRE- 134 (461)
T ss_pred HHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-----chH---HHHHHHHHhhhhHHheecccceehhhcCChh-
Confidence 3456778899999999999999888777654443222 544 244446678887 4444332 2344444443
Q ss_pred CCcccchhHHHHHHHHHHHHhhh
Q 013336 372 GGQGLAIGVLNLAIVIPQMIVSL 394 (445)
Q Consensus 372 ~~~G~~~gi~n~~~~l~qii~~~ 394 (445)
...+..++.=.....+-++++.
T Consensus 135 -tie~Nisi~Wai~~~~li~Ggi 156 (461)
T KOG3098|consen 135 -TIERNISIFWAIGQSSLIIGGI 156 (461)
T ss_pred -hHHHHHHHHHHHHHHHHHhhhH
Confidence 3344344444444444444433
No 290
>CHL00031 psbT photosystem II protein T
Probab=21.84 E-value=1.5e+02 Score=18.83 Aligned_cols=16 Identities=19% Similarity=0.133 Sum_probs=9.8
Q ss_pred HHhheeeEeeccCCCC
Q 013336 131 CALVTIYFADEVPLTV 146 (445)
Q Consensus 131 ~~~~t~~~v~E~p~~~ 146 (445)
.++...++.+|+|...
T Consensus 15 gilFFAI~FRePPri~ 30 (33)
T CHL00031 15 GIIFFAIFFREPPKVP 30 (33)
T ss_pred HHHHHhheecCCCCCC
Confidence 3344456789988543
No 291
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=20.85 E-value=1.6e+02 Score=25.81 Aligned_cols=53 Identities=15% Similarity=0.067 Sum_probs=43.2
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhcccc
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA 94 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~ 94 (445)
.+-.++.++......+.-.|+.+..++++|++-.++.-.....+.+.|.++..
T Consensus 94 ~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 94 PASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 55566788888888999999999999999999999887777777777765443
No 292
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=20.52 E-value=1.1e+02 Score=31.23 Aligned_cols=54 Identities=17% Similarity=0.190 Sum_probs=43.5
Q ss_pred HHHHHHhccccccchhhHHHHhcCCCccchhhHHHHHHHHHHHhhHHHhccccccchhhhh
Q 013336 42 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWF 102 (445)
Q Consensus 42 ~g~~lld~s~n~~~~p~~A~i~D~~p~~qr~~a~~~~~~~~~lG~~lG~~iG~~~~~~~~~ 102 (445)
+|.|.+|.++ .=.+-|.+|++||..+++.+..+...=.++-++++-+.+.++.|
T Consensus 398 ~GLW~fDlAV-------tqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilvIi~pnp~~F 451 (503)
T KOG2601|consen 398 LGLWMFDLAV-------TQIMQETVPESERCVVFGVQNSLNSALDLLKDILVIIVPNPKDF 451 (503)
T ss_pred hhHHhccHHH-------HHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEEEEecCccce
Confidence 8899999875 33556899999999999999999999999999988664334333
Done!