Query 013339
Match_columns 445
No_of_seqs 423 out of 4384
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 08:43:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013339.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013339hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 4E-31 1.4E-35 232.2 17.5 157 27-192 6-162 (169)
2 3hra_A Ankyrin repeat family p 100.0 5.6E-31 1.9E-35 237.1 18.5 181 2-189 16-201 (201)
3 1yyh_A HN1;, notch 1, ankyrin 100.0 2.8E-31 9.6E-36 248.5 17.1 183 3-193 35-217 (253)
4 1oy3_D Transcription factor in 100.0 9.5E-31 3.3E-35 247.7 19.6 184 2-193 20-252 (282)
5 2f8y_A Notch homolog 1, transl 100.0 2.9E-31 1E-35 242.9 14.8 183 2-192 2-184 (223)
6 3aji_A 26S proteasome non-ATPa 100.0 3.2E-30 1.1E-34 237.3 20.9 182 2-192 17-198 (231)
7 2f8y_A Notch homolog 1, transl 100.0 2.8E-30 9.7E-35 236.3 20.4 184 2-194 36-219 (223)
8 2dzn_A Probable 26S proteasome 100.0 4E-30 1.4E-34 236.0 20.5 185 2-193 13-202 (228)
9 3aji_A 26S proteasome non-ATPa 100.0 2.8E-30 9.4E-35 237.7 19.2 180 2-191 51-230 (231)
10 1ikn_D Protein (I-kappa-B-alph 100.0 7.3E-31 2.5E-35 242.8 13.9 188 2-197 19-215 (236)
11 2rfa_A Transient receptor pote 100.0 2.5E-30 8.5E-35 238.3 17.3 184 2-194 14-225 (232)
12 4gpm_A Engineered protein OR26 100.0 4.1E-30 1.4E-34 225.8 17.7 150 2-157 15-164 (169)
13 3b7b_A Euchromatic histone-lys 100.0 1E-29 3.5E-34 234.8 19.8 183 2-193 22-204 (237)
14 4b93_B Ankyrin repeat domain-c 100.0 2.1E-30 7E-35 245.2 13.5 159 5-169 67-225 (269)
15 2rfm_A Putative ankyrin repeat 100.0 9.4E-30 3.2E-34 227.8 16.6 166 15-189 25-190 (192)
16 1yyh_A HN1;, notch 1, ankyrin 100.0 9.3E-30 3.2E-34 238.1 17.1 179 2-189 68-246 (253)
17 2xai_A ASB-9, ankyrin repeat a 100.0 2E-29 6.7E-34 237.1 19.4 180 2-193 14-193 (261)
18 1k1a_A B-cell lymphoma 3-encod 100.0 4.6E-29 1.6E-33 230.7 20.5 184 2-193 20-210 (241)
19 2etb_A Transient receptor pote 100.0 3.3E-30 1.1E-34 241.3 9.8 184 6-194 21-249 (256)
20 2dzn_A Probable 26S proteasome 100.0 1.2E-28 3.9E-33 226.2 19.0 174 2-187 47-226 (228)
21 3v31_A Ankyrin repeat family A 100.0 7.1E-29 2.4E-33 216.9 16.3 161 24-193 2-162 (167)
22 3d9h_A CDNA FLJ77766, highly s 100.0 1.1E-28 3.7E-33 235.3 19.0 180 2-193 70-249 (285)
23 1k1a_A B-cell lymphoma 3-encod 100.0 5.3E-29 1.8E-33 230.3 16.1 179 2-190 57-240 (241)
24 3ljn_A Hypothetical protein; a 100.0 6.8E-29 2.3E-33 244.7 17.1 185 2-192 31-270 (364)
25 4b93_B Ankyrin repeat domain-c 100.0 4.4E-29 1.5E-33 236.0 14.6 183 2-193 22-212 (269)
26 3b7b_A Euchromatic histone-lys 100.0 2.1E-28 7.3E-33 225.9 18.6 164 2-170 55-218 (237)
27 2xai_A ASB-9, ankyrin repeat a 100.0 1.9E-28 6.3E-33 230.5 18.5 176 2-191 47-222 (261)
28 1s70_B 130 kDa myosin-binding 100.0 2.1E-28 7.3E-33 234.0 19.1 185 2-193 51-259 (299)
29 1wdy_A 2-5A-dependent ribonucl 100.0 4.8E-28 1.7E-32 228.9 20.8 183 2-193 50-280 (285)
30 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.8E-28 6.3E-33 214.9 16.5 161 20-189 9-169 (169)
31 3utm_A Tankyrase-1; tankyrase, 100.0 3.8E-28 1.3E-32 236.9 20.4 94 93-193 211-307 (351)
32 3twr_A Tankyrase-2; ankyrin re 100.0 1.5E-28 5E-33 214.4 15.1 161 21-190 4-164 (165)
33 1wdy_A 2-5A-dependent ribonucl 100.0 9.9E-28 3.4E-32 226.7 22.0 187 2-193 16-213 (285)
34 3d9h_A CDNA FLJ77766, highly s 100.0 3.5E-28 1.2E-32 231.8 18.6 176 2-191 103-279 (285)
35 4hbd_A KN motif and ankyrin re 100.0 1.3E-28 4.6E-33 233.6 15.6 179 3-190 88-274 (276)
36 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.7E-28 5.9E-33 213.0 14.9 159 23-191 3-162 (162)
37 2pnn_A Transient receptor pote 100.0 2.6E-29 8.8E-34 237.7 10.2 185 2-191 24-258 (273)
38 3jxi_A Vanilloid receptor-rela 100.0 2.3E-29 8E-34 236.0 9.5 185 6-195 24-254 (260)
39 3kea_A K1L; tropism, ANK repea 100.0 7.8E-29 2.7E-33 236.3 12.6 179 2-194 42-223 (285)
40 3v30_A DNA-binding protein rfx 100.0 2.3E-28 7.8E-33 214.7 14.5 161 25-193 2-162 (172)
41 1oy3_D Transcription factor in 100.0 3.7E-28 1.3E-32 229.9 16.8 165 2-171 56-267 (282)
42 3v30_A DNA-binding protein rfx 100.0 3.7E-28 1.3E-32 213.3 15.4 159 2-165 13-171 (172)
43 3eu9_A Huntingtin-interacting 100.0 6.7E-28 2.3E-32 222.2 17.1 185 2-192 20-236 (240)
44 3f6q_A Integrin-linked protein 100.0 7.9E-28 2.7E-32 212.8 16.7 163 23-193 3-165 (179)
45 2fo1_E LIN-12 protein; beta-ba 100.0 3.9E-28 1.3E-32 240.4 16.0 176 7-191 149-338 (373)
46 4g8k_A 2-5A-dependent ribonucl 100.0 1.1E-27 3.6E-32 233.6 18.8 187 2-192 36-299 (337)
47 1awc_B Protein (GA binding pro 100.0 1.1E-27 3.9E-32 206.2 15.8 151 25-185 2-152 (153)
48 1n11_A Ankyrin; clathrin, BAND 100.0 1.6E-27 5.4E-32 240.6 19.4 181 3-193 191-371 (437)
49 2rfa_A Transient receptor pote 100.0 1.9E-27 6.6E-32 218.9 18.1 161 24-192 2-184 (232)
50 1sw6_A Regulatory protein SWI6 100.0 2.5E-28 8.4E-33 237.5 11.7 165 4-169 110-323 (327)
51 3utm_A Tankyrase-1; tankyrase, 99.9 4.2E-27 1.4E-31 229.4 19.7 183 2-193 35-274 (351)
52 1n11_A Ankyrin; clathrin, BAND 99.9 4E-27 1.4E-31 237.6 19.9 179 2-190 223-401 (437)
53 3eu9_A Huntingtin-interacting 99.9 4.5E-27 1.5E-31 216.6 17.8 168 20-194 4-171 (240)
54 2fo1_E LIN-12 protein; beta-ba 99.9 4.6E-27 1.6E-31 232.7 17.0 183 2-192 177-372 (373)
55 1s70_B 130 kDa myosin-binding 99.9 1E-26 3.4E-31 222.3 16.9 183 3-194 10-227 (299)
56 1ikn_D Protein (I-kappa-B-alph 99.9 1.1E-27 3.7E-32 221.4 9.0 168 20-193 3-178 (236)
57 3kea_A K1L; tropism, ANK repea 99.9 5.2E-27 1.8E-31 223.6 13.7 177 2-193 11-188 (285)
58 3hra_A Ankyrin repeat family p 99.9 4.9E-26 1.7E-30 204.6 19.3 168 22-193 2-172 (201)
59 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.5E-26 5.1E-31 200.8 14.9 146 2-154 16-162 (162)
60 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.2E-26 1.4E-30 199.8 17.7 145 2-152 25-169 (169)
61 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.3E-26 4.5E-31 199.9 14.2 153 25-188 2-155 (156)
62 3f6q_A Integrin-linked protein 99.9 1.3E-26 4.3E-31 205.1 14.0 156 2-162 16-171 (179)
63 3ljn_A Hypothetical protein; a 99.9 1.6E-26 5.4E-31 227.7 15.0 165 19-191 14-198 (364)
64 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-26 4.2E-31 200.6 11.2 143 20-168 7-150 (156)
65 4g8k_A 2-5A-dependent ribonucl 99.9 1E-25 3.6E-30 219.4 19.0 180 2-194 136-329 (337)
66 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.1E-26 7.2E-31 213.6 12.8 163 23-193 3-166 (239)
67 1awc_B Protein (GA binding pro 99.9 1.5E-25 5.2E-30 192.8 16.9 140 2-148 13-152 (153)
68 3v31_A Ankyrin repeat family A 99.9 1.2E-25 4E-30 196.3 15.4 148 2-155 14-161 (167)
69 2etb_A Transient receptor pote 99.9 3.2E-26 1.1E-30 214.2 12.0 165 24-193 1-208 (256)
70 3twr_A Tankyrase-2; ankyrin re 99.9 7.4E-26 2.5E-30 197.2 13.2 146 2-153 19-164 (165)
71 2rfm_A Putative ankyrin repeat 99.9 1.6E-25 5.6E-30 200.1 15.3 145 2-152 46-190 (192)
72 2pnn_A Transient receptor pote 99.9 1.8E-25 6.2E-30 211.2 15.5 160 2-166 68-271 (273)
73 1d9s_A Cyclin-dependent kinase 99.9 7.8E-26 2.7E-30 190.8 11.1 130 19-154 6-136 (136)
74 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5E-25 1.7E-29 189.9 15.7 143 2-151 13-155 (156)
75 2vge_A RELA-associated inhibit 99.9 4.6E-26 1.6E-30 210.1 7.2 157 7-168 1-162 (229)
76 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3E-24 1E-28 177.5 15.7 126 24-154 1-126 (126)
77 2jab_A H10-2-G3; HER2, darpin, 99.9 2.2E-24 7.7E-29 181.8 13.9 128 20-152 9-136 (136)
78 3jxi_A Vanilloid receptor-rela 99.9 4E-25 1.4E-29 207.1 9.7 169 22-193 2-212 (260)
79 2vge_A RELA-associated inhibit 99.9 2.3E-26 7.8E-31 212.1 -0.3 169 2-183 32-205 (229)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.1E-25 2.1E-29 203.7 9.3 153 2-161 16-171 (239)
81 1sw6_A Regulatory protein SWI6 99.9 1.6E-24 5.4E-29 210.6 10.8 185 2-193 58-310 (327)
82 1d9s_A Cyclin-dependent kinase 99.9 5.3E-24 1.8E-28 179.5 11.8 133 49-191 3-136 (136)
83 3t8k_A Uncharacterized protein 99.9 7.7E-25 2.6E-29 195.2 6.9 155 25-190 6-178 (186)
84 3t8k_A Uncharacterized protein 99.9 2.9E-24 1E-28 191.4 9.4 151 2-159 17-184 (186)
85 4hbd_A KN motif and ankyrin re 99.9 1.3E-23 4.3E-28 199.3 13.4 147 2-152 122-273 (276)
86 3ehr_A Osteoclast-stimulating 99.9 4.8E-24 1.6E-28 195.2 7.9 140 20-163 68-207 (222)
87 3c5r_A BARD-1, BRCA1-associate 99.9 8.8E-24 3E-28 178.2 8.5 125 20-149 5-129 (137)
88 3c5r_A BARD-1, BRCA1-associate 99.9 4.1E-23 1.4E-27 174.1 10.3 132 48-189 1-132 (137)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.9E-22 1E-26 165.4 13.9 126 58-191 1-126 (126)
90 3deo_A Signal recognition part 99.9 5.6E-23 1.9E-27 182.4 9.8 140 22-188 41-181 (183)
91 2jab_A H10-2-G3; HER2, darpin, 99.9 1.6E-22 5.5E-27 170.4 11.3 127 55-189 10-136 (136)
92 3aaa_C Myotrophin, protein V-1 99.9 1.2E-22 4.2E-27 167.9 10.4 111 22-137 4-114 (123)
93 3ui2_A Signal recognition part 99.9 1.6E-22 5.6E-27 188.0 10.8 143 22-191 42-185 (244)
94 2aja_A Ankyrin repeat family p 99.9 3.6E-23 1.2E-27 204.2 3.0 157 21-192 88-251 (376)
95 1bi7_B P16INK4A, MTS1, multipl 99.9 4.1E-22 1.4E-26 172.0 8.6 131 55-194 8-139 (156)
96 3aaa_C Myotrophin, protein V-1 99.9 1.6E-21 5.5E-26 161.1 11.6 110 56-169 4-113 (123)
97 2b0o_E UPLC1; arfgap, structur 99.9 1.3E-21 4.4E-26 187.7 11.9 137 24-170 150-294 (301)
98 3deo_A Signal recognition part 99.8 6.4E-22 2.2E-26 175.6 4.0 137 32-173 7-154 (183)
99 3jue_A Arfgap with coiled-coil 99.8 1.1E-20 3.8E-25 185.7 13.1 142 23-169 197-344 (368)
100 3ehr_A Osteoclast-stimulating 99.8 6.1E-21 2.1E-25 174.4 9.6 167 20-193 20-200 (222)
101 3lvq_E ARF-GAP with SH3 domain 99.8 3E-20 1E-24 190.6 15.5 131 24-158 131-269 (497)
102 2b0o_E UPLC1; arfgap, structur 99.8 1.2E-20 3.9E-25 181.1 10.4 130 2-142 162-299 (301)
103 1dcq_A PYK2-associated protein 99.8 1.5E-19 5.2E-24 171.3 17.0 166 20-192 61-264 (278)
104 3ui2_A Signal recognition part 99.8 1E-21 3.6E-26 182.6 0.1 158 23-189 13-171 (244)
105 1dcq_A PYK2-associated protein 99.8 1.7E-19 5.9E-24 170.9 15.2 126 26-155 131-264 (278)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.2E-19 4.2E-24 142.1 11.5 90 24-115 1-90 (93)
107 2aja_A Ankyrin repeat family p 99.8 8.9E-22 3.1E-26 194.2 -2.1 147 2-160 103-256 (376)
108 2l6b_A NR1C; ankyrin, consensu 99.8 6.2E-20 2.1E-24 149.6 9.0 108 55-166 5-112 (115)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.5E-19 8.4E-24 140.4 11.6 93 58-154 1-93 (93)
110 2l6b_A NR1C; ankyrin, consensu 99.8 5.9E-20 2E-24 149.7 8.2 109 20-133 4-112 (115)
111 3jue_A Arfgap with coiled-coil 99.8 7.4E-19 2.5E-23 172.7 13.4 136 2-140 211-348 (368)
112 3lvq_E ARF-GAP with SH3 domain 99.7 5.5E-18 1.9E-22 173.8 13.5 129 58-194 131-268 (497)
113 2zgd_A 3 repeat synthetic anky 99.7 5.3E-18 1.8E-22 137.2 9.6 97 14-112 13-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 3.2E-16 1.1E-20 126.7 9.5 90 55-148 20-109 (110)
115 4ev6_A Magnesium transport pro 67.8 12 0.00042 35.2 7.4 20 337-356 282-301 (339)
116 2iub_A CORA, divalent cation t 54.0 12 0.00042 35.6 4.7 20 337-356 306-325 (363)
117 2knc_B Integrin beta-3; transm 51.6 35 0.0012 24.6 5.6 31 367-397 12-42 (79)
118 2knc_A Integrin alpha-IIB; tra 48.7 31 0.001 22.9 4.5 21 361-381 8-28 (54)
119 2k1a_A Integrin alpha-IIB; sin 31.2 75 0.0026 19.8 4.0 19 363-381 8-26 (42)
120 2klu_A T-cell surface glycopro 29.5 24 0.00082 24.2 1.6 19 371-389 12-30 (70)
121 2l8s_A Integrin alpha-1; trans 28.1 97 0.0033 20.4 4.3 18 364-381 8-25 (54)
122 2lx0_A Membrane fusion protein 24.2 89 0.003 17.2 3.0 12 380-391 16-27 (32)
123 2l2t_A Receptor tyrosine-prote 20.5 97 0.0033 19.5 3.0 8 368-375 12-19 (44)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4e-31 Score=232.23 Aligned_cols=157 Identities=31% Similarity=0.463 Sum_probs=145.0
Q ss_pred hHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCH
Q 013339 27 TPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQY 106 (445)
Q Consensus 27 TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~ 106 (445)
++|+.||+.|+.++|+.||+.|++++. +|.+|+||||+|+..|+.++++.|++.+ .+++.+|.+|+||||+|+.+|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~-~d~~g~t~l~~a~~~~~~~~~~~ll~~g-ad~~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNA-SDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcc-cchhhhccCCCCHHHHHHHcCCH
Confidence 579999999999999999999999977 8999999999999999999999999998 57788999999999999999999
Q ss_pred HHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHH
Q 013339 107 EAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALE 186 (445)
Q Consensus 107 ~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~ 186 (445)
+++++|++. +.++|.+|.+|+||||+|+..|+.+++++|+++|++++.+|.+|+|||++ +...++.+++++|+
T Consensus 84 ~~v~~Ll~~---gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~----A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 84 EVVKLLISK---GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDL----AREHGNEEVVKLLE 156 (169)
T ss_dssp HHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----HHHTTCHHHHHHHH
T ss_pred HHHHHHHHC---cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH----HHHcCCHHHHHHHH
Confidence 999999998 78899999999999999999999999999999999999999999999999 55567889999999
Q ss_pred HhcCcc
Q 013339 187 EAGARR 192 (445)
Q Consensus 187 ~~ga~~ 192 (445)
++|++.
T Consensus 157 ~~GA~i 162 (169)
T 4gpm_A 157 KQGGWL 162 (169)
T ss_dssp TC----
T ss_pred HCCCCc
Confidence 999874
No 2
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=5.6e-31 Score=237.06 Aligned_cols=181 Identities=23% Similarity=0.313 Sum_probs=166.8
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..++++.|++.++...+..|.+|+||||+|+..|+.++++.|+++|++++. +|..|.||||+|+..|+.+++++|++.
T Consensus 16 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 94 (201)
T 3hra_A 16 RDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL-QNSISDSPYLYAGAQGRTEILAYMLKH 94 (201)
T ss_dssp TCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 5678999999998855558899999999999999999999999999999976 899999999999999999999999988
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCc-----HHHHHHHHhcCCCcc
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKL-----TTMVIYLLKLGVDVN 156 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~-----~~iv~~Ll~~g~~~~ 156 (445)
++...+..+..|.||||+|+..|+.+++++|++.. ...++.+|.+|+||||+|+..+. .+++++|++.|++++
T Consensus 95 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 95 ATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG--REDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp SCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHC--CCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred cCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence 77888899999999999999999999999999982 26789999999999999999887 999999999999999
Q ss_pred ccccCCCCHHHHHhhhccccchhcHHHHHHHhc
Q 013339 157 AINRKGYTALDVVESDASNSGALQIVPALEEAG 189 (445)
Q Consensus 157 ~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~g 189 (445)
..|..|.||+++ +...++.+++++|+++|
T Consensus 173 ~~~~~g~t~l~~----A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 173 IKDNSGRTAMDY----ANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCCTTSCCHHHH----HHHHTCHHHHHHHHTCC
T ss_pred ccCCCCCCHHHH----HHHcCCHhHHHHHHhcC
Confidence 999999999999 55567889999998876
No 3
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=2.8e-31 Score=248.53 Aligned_cols=183 Identities=23% Similarity=0.298 Sum_probs=156.9
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC
Q 013339 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 82 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~ 82 (445)
..++++.|++.+++++...|..|+||||+||..|+.++++.|+++|++++. +|..|+||||+|+..|+.+++++|++.+
T Consensus 35 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 113 (253)
T 1yyh_A 35 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIRNR 113 (253)
T ss_dssp -----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHST
T ss_pred ChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 679999999999999888899999999999999999999999999999976 8999999999999999999999999999
Q ss_pred CCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCC
Q 013339 83 LQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKG 162 (445)
Q Consensus 83 ~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G 162 (445)
+...+.++..|.||||+|+..|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|++.|++++..|..|
T Consensus 114 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 190 (253)
T 1yyh_A 114 ATDLDARMHDGTTPLILAARLAVEGMLEDLINS---HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 190 (253)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT---TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCccccCCCCCcHHHHHHHcChHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 778889999999999999999999999999997 77899999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 163 YTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 163 ~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
.|||++ +...++.+++++|++.|++..
T Consensus 191 ~tpL~~----A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 191 ETPLFL----AAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp CCHHHH----HHHHTCHHHHHHHHHTTCCTT
T ss_pred CCHHHH----HHHCCCHHHHHHHHHcCCCcc
Confidence 999999 455677889999999998753
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=9.5e-31 Score=247.73 Aligned_cols=184 Identities=24% Similarity=0.249 Sum_probs=167.4
Q ss_pred CHHHHHHHHHHhchh--hhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHH
Q 013339 2 HVADIVKELLEARQE--FAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEIL 79 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~--~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll 79 (445)
|+.++++.|++.+++ ..+..|..|+||||+||..|+.++++.|+++|++++. +|..|+||||+|+..|+.+++++|+
T Consensus 20 g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~~~~~~v~~Ll 98 (282)
T 1oy3_D 20 QHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV-AERGGHTALHLACRVRAHTCACVLL 98 (282)
T ss_dssp TCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTSCCHHHHHTTTTCHHHHHHHS
T ss_pred CCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCcchhHhhh
Confidence 678999999998876 2458899999999999999999999999999999976 8999999999999999999999999
Q ss_pred hcCCC----------------------------------------------ccccccccCcchHhHHHHcCCHHHHHHHH
Q 013339 80 SLNLQ----------------------------------------------SAEMRTIHGETVLHLTVKNNQYEAVKYLM 113 (445)
Q Consensus 80 ~~~~~----------------------------------------------~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll 113 (445)
+.++. ..+..+..|.||||+|+..|+.+++++|+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 178 (282)
T 1oy3_D 99 QPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR 178 (282)
T ss_dssp SSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 97743 24556788999999999999999999999
Q ss_pred HhcCcccccCCCCCC-CCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcc
Q 013339 114 ETLNITKLANMPDND-GNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 114 ~~~~~~~~~n~~d~~-g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
++ +..++.++.. |+||||+|+..++.+++++|+++|++++.+|..|.||||+ +...++.+++++|+++|++.
T Consensus 179 ~~---g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~----A~~~~~~~~v~~Ll~~ga~~ 251 (282)
T 1oy3_D 179 DA---GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGS----ALLRPNPILARLLRAHGAPE 251 (282)
T ss_dssp HH---TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----HHTSSCHHHHHHHHHTTCCC
T ss_pred Hc---CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHH----HHHcCCcHHHHHHHHcCCCc
Confidence 98 7788888854 9999999999999999999999999999999999999999 55667889999999999986
Q ss_pred c
Q 013339 193 C 193 (445)
Q Consensus 193 ~ 193 (445)
.
T Consensus 252 ~ 252 (282)
T 1oy3_D 252 P 252 (282)
T ss_dssp C
T ss_pred C
Confidence 5
No 5
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=2.9e-31 Score=242.89 Aligned_cols=183 Identities=23% Similarity=0.300 Sum_probs=165.0
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.|+++.|++.+++++...|.+|+||||+||..|+.++++.|+++|++++. +|..|+||||+|+..|+.+++++|++.
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4677888999999998877899999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
++...+..+..|.||||+|+..|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|++.|++++..|..
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 157 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINS---HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR 157 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHc---CCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 8778888899999999999999999999999987 6778899999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcCcc
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
|.|||++| ...++.+++++|++.|++.
T Consensus 158 g~t~L~~A----~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 158 EETPLFLA----AREGSYETAKVLLDHFANR 184 (223)
T ss_dssp CCCHHHHH----HHHTCHHHHHHHHHTTCCT
T ss_pred CcCHHHHH----HHcCCHHHHHHHHHcCCCC
Confidence 99999994 4557788999999998764
No 6
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=3.2e-30 Score=237.29 Aligned_cols=182 Identities=29% Similarity=0.352 Sum_probs=170.4
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..|+++.+++.++......|..|.||||+|+..|+.++++.|+++|++++. +|..|+||||+|+..|+.+++++|++.
T Consensus 17 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 95 (231)
T 3aji_A 17 GKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND-KDDAGWSPLHIAASAGXDEIVKALLVK 95 (231)
T ss_dssp TCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCC-cCCCCCCHHHHHHHcCHHHHHHHHHHc
Confidence 5689999999999998889999999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+ ...+.++..|.||||+|+..|+.+++++|++. +..++.+|..|.||||+|+..++.+++++|++.|++++..|..
T Consensus 96 g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 171 (231)
T 3aji_A 96 G-AHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG---GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTE 171 (231)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT
T ss_pred C-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCC
Confidence 8 56778889999999999999999999999997 7778999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcCcc
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
|.||||+ +...++.+++++|++.|++.
T Consensus 172 g~t~L~~----A~~~~~~~~v~~Ll~~ga~~ 198 (231)
T 3aji_A 172 GNTPLHL----ACDEERVEEAKFLVTQGASI 198 (231)
T ss_dssp SCCHHHH----HHHTTCHHHHHHHHHTTCCS
T ss_pred CCCHHHH----HHHCCCHHHHHHHHHCCCCC
Confidence 9999999 45567789999999999864
No 7
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=2.8e-30 Score=236.30 Aligned_cols=184 Identities=22% Similarity=0.230 Sum_probs=169.9
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.|+++.|++.+.+++ ..|..|.||||+|+..|+.++++.|++.++.....+|..|.||||+|+..|+.++++.|++.
T Consensus 36 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 114 (223)
T 2f8y_A 36 SRSDAAKRLLEASADAN-IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS 114 (223)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHc
Confidence 67899999999988876 77899999999999999999999999999844455899999999999999999999999998
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+ ..++..|..|.||||+|+..|+.+++++|+++ +..++.+|..|.||||+|+..++.+++++|+++|++++..|..
T Consensus 115 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 190 (223)
T 2f8y_A 115 H-ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN---GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHM 190 (223)
T ss_dssp T-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred C-CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccc
Confidence 7 56778889999999999999999999999998 7789999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
|.||+++ +...++.+++++|+++|+.+..
T Consensus 191 g~t~l~~----A~~~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 191 DRLPRDI----AQERMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp CCCHHHH----HHHTTCHHHHHHHHHTTCSSCC
T ss_pred CCCHHHH----HHHhcchHHHHHHHHcCCCccc
Confidence 9999999 5566788999999999987654
No 8
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=4e-30 Score=235.99 Aligned_cols=185 Identities=29% Similarity=0.347 Sum_probs=169.8
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcC--CCCCCCCCCCCccHHHHHHHcCCHHHHHHHH
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLD--PDLSSLPDNEGRTPLHWAAIKGRINIIDEIL 79 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~--~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll 79 (445)
|..++++.|++.+++.....|..|+||||+|+..|+.++++.|++.| +++....|..|+||||+|+..|+.++++.|+
T Consensus 13 g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 92 (228)
T 2dzn_A 13 NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY 92 (228)
T ss_dssp TCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 67899999999999988889999999999999999999999999999 5555547889999999999999999999999
Q ss_pred hcC-CCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcC-CCccc
Q 013339 80 SLN-LQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG-VDVNA 157 (445)
Q Consensus 80 ~~~-~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g-~~~~~ 157 (445)
+.+ +...+..+..|.||||+|+..|+.+++++|+++ +..++.+|.+|+||||+|+..++.+++++|++.| ++++.
T Consensus 93 ~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 169 (228)
T 2dzn_A 93 DRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN---GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW 169 (228)
T ss_dssp SSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCC
T ss_pred hCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc---CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccC
Confidence 987 356777888999999999999999999999998 7789999999999999999999999999999999 99999
Q ss_pred cccCCCCHHHHHhhhccccchhcHHHHHH-HhcCccc
Q 013339 158 INRKGYTALDVVESDASNSGALQIVPALE-EAGARRC 193 (445)
Q Consensus 158 ~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~-~~ga~~~ 193 (445)
.|..|.||||+ +...++.+++++|+ +.|++..
T Consensus 170 ~d~~g~t~L~~----A~~~~~~~~v~~Ll~~~ga~~~ 202 (228)
T 2dzn_A 170 QDKQGWTPLFH----ALAEGHGDAAVLLVEKYGAEYD 202 (228)
T ss_dssp CCTTSCCHHHH----HHHTTCHHHHHHHHHHHCCCSC
T ss_pred cCCCCCCHHHH----HHHcCCHHHHHHHHHhcCCCCC
Confidence 99999999999 55567889999999 8888754
No 9
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=2.8e-30 Score=237.69 Aligned_cols=180 Identities=28% Similarity=0.357 Sum_probs=167.8
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++.+.+++ ..|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++.
T Consensus 51 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 128 (231)
T 3aji_A 51 GHTEIVEFLLQLGVPVN-DKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA-VNQNGCTPLHYAASKNRHEIAVMLLEG 128 (231)
T ss_dssp TCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CcHHHHHHHHHhCCCCC-CcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 56899999999988766 7888999999999999999999999999999976 899999999999999999999999998
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+ ...+.++..|.||||+|+..|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|+++|++++.+|..
T Consensus 129 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 204 (231)
T 3aji_A 129 G-ANPDAKDHYDATAMHRAAAKGNLKMVHILLFY---KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKE 204 (231)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred C-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc---CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Confidence 8 56778889999999999999999999999997 7789999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
|.||+++ +...++.++.++|.++|++
T Consensus 205 g~t~l~~----A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 205 EKTPLQV----AKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp SCCHHHH----SCHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHH----HHhhHHHHHHHHHcccccc
Confidence 9999999 6667788899999998764
No 10
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=7.3e-31 Score=242.76 Aligned_cols=188 Identities=26% Similarity=0.325 Sum_probs=166.0
Q ss_pred CHHHHHHHHHHhchh---hhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHH
Q 013339 2 HVADIVKELLEARQE---FAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEI 78 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~---~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~L 78 (445)
|+.++++.|++..+. ..+..|..|+||||+|+..|+.+++++|+++|++++. +|..|+||||+|+..|+.++++.|
T Consensus 19 g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~L 97 (236)
T 1ikn_D 19 EEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL-RDFRGNTPLHLACEQGCLASVGVL 97 (236)
T ss_dssp TCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC-CCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred CChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHH
Confidence 345667777777654 3457889999999999999999999999999999976 899999999999999999999999
Q ss_pred HhcCCC-----ccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCC-CCCcHHHHHHhCCcHHHHHHHHhcC
Q 013339 79 LSLNLQ-----SAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDN-DGNTILHLATAGKLTTMVIYLLKLG 152 (445)
Q Consensus 79 l~~~~~-----~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~-~g~T~LHlA~~~~~~~iv~~Ll~~g 152 (445)
++.++. .....+..|.||||+|+..|+.+++++|+++ +..++.+|. .|+||||+|+..++.+++++|+++|
T Consensus 98 l~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 174 (236)
T 1ikn_D 98 TQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL---GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG 174 (236)
T ss_dssp HHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH---TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 998843 2567788899999999999999999999998 778899997 9999999999999999999999999
Q ss_pred CCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccCCCC
Q 013339 153 VDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCDQLP 197 (445)
Q Consensus 153 ~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~~~~ 197 (445)
++++..|..|.||+++ +...++.+++++|+++|++.....+
T Consensus 175 a~~~~~~~~g~tpl~~----A~~~~~~~~~~~Ll~~ga~~~~~~~ 215 (236)
T 1ikn_D 175 ADVNRVTYQGYSPYQL----TWGRPSTRIQQQLGQLTLENLQMLP 215 (236)
T ss_dssp CCSCCCCTTCCCGGGG----CTTSSCHHHHHHHHTTSCGGGSSCC
T ss_pred CCCCcccCCCCCHHHH----HHccCchHHHHHHHHcchhhhhcCC
Confidence 9999999999999999 7778899999999999998765443
No 11
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.5e-30 Score=238.30 Aligned_cols=184 Identities=24% Similarity=0.306 Sum_probs=162.0
Q ss_pred CHHHHHHHHHHh-chhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCC----CCCCCCCccHHHHHHHcCCHHHHH
Q 013339 2 HVADIVKELLEA-RQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLS----SLPDNEGRTPLHWAAIKGRINIID 76 (445)
Q Consensus 2 ~~~d~v~~Ll~~-~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~----~~~d~~G~TpLh~Aa~~G~~~iv~ 76 (445)
|+.++++.|++. +.++ +..|..|+||||+|+..|+.++++.|++.++++. ..+|.+|.||||+|+..|+.++++
T Consensus 14 g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 92 (232)
T 2rfa_A 14 NDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVR 92 (232)
T ss_dssp TCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHH
Confidence 678999999998 5454 4789999999999999999999999999998762 236789999999999999999999
Q ss_pred HHHhcCCCccccccc-------------cCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHH
Q 013339 77 EILSLNLQSAEMRTI-------------HGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTT 143 (445)
Q Consensus 77 ~Ll~~~~~~~~~~~~-------------~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~ 143 (445)
+|++.+. ..+.++. .|+||||+|+..|+.+++++|+++ +.++|.+|.+|+||||+|+..++.+
T Consensus 93 ~Ll~~g~-~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~t~L~~A~~~~~~~ 168 (232)
T 2rfa_A 93 ALLARGA-SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH---GADIRAQDSLGNTVLHILILQPNKT 168 (232)
T ss_dssp HHHHTTC-CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHTCSCHH
T ss_pred HHHhCCC-CCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHcCChH
Confidence 9999984 4444443 799999999999999999999998 7889999999999999999999999
Q ss_pred HH----HHHHhcCCCc------cccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013339 144 MV----IYLLKLGVDV------NAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 144 iv----~~Ll~~g~~~------~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
++ ++|++.|++. +..|..|.|||++ |...++.+++++|+++|+....
T Consensus 169 ~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~----A~~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 169 FACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKL----AGVEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp HHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHH----HHHHTCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHH----HHHcCCHHHHHHHHhcCccchh
Confidence 88 9999999988 6899999999999 5566788999999999977543
No 12
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.1e-30 Score=225.79 Aligned_cols=150 Identities=32% Similarity=0.458 Sum_probs=137.8
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.|+|+.|++.+.+++ ..|.+|+||||+|+..|+.++++.|++.|++++. +|.+|+||||+|+..|+.++++.|+++
T Consensus 15 G~~~~v~~Ll~~Gadvn-~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~-~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 92 (169)
T 4gpm_A 15 GNKDRVKDLIENGADVN-ASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLISK 92 (169)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh-hccCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 67899999999998876 7899999999999999999999999999999976 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccc
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNA 157 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~ 157 (445)
+ .+++.+|.+|+||||+|+.+|+.+++++|++. +.+++.+|.+|+||||+|+..++.+++++|+++|++++.
T Consensus 93 g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~---gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 93 G-ADVNAKDSDGRTPLHHAAENGHKEVVKLLISK---GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred c-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 8 56788999999999999999999999999998 788999999999999999999999999999999999864
No 13
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1e-29 Score=234.85 Aligned_cols=183 Identities=24% Similarity=0.287 Sum_probs=170.7
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.|+++.|++.+.+++ ..|..|.||||+|+..|+.+++++|+++|+++.. +|..|.||||+|+..|+.+++++|++.
T Consensus 22 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 99 (237)
T 3b7b_A 22 GHVDICHMLVQAGANID-TCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP-KDAEGSTCLHLAAKKGHYEVVQYLLSN 99 (237)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCC-CCTTSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CcHHHHHHHHHcCCCcC-ccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhC
Confidence 57899999999988876 7788999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
++...+..+..|.||||+|+..|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|++.|++++..|..
T Consensus 100 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 176 (237)
T 3b7b_A 100 GQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK---GSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIH 176 (237)
T ss_dssp TCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTT
T ss_pred CCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCC
Confidence 9888888999999999999999999999999997 7788999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
|.|||++| ...++.+++++|++.|++..
T Consensus 177 g~t~L~~A----~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 177 GDSPLHIA----ARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp CCCHHHHH----HHTTCHHHHHHHHTTTCCTT
T ss_pred CCCHHHHH----HHhCCHhHHHHHHHcCCCCC
Confidence 99999994 45677889999999988643
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.1e-30 Score=245.18 Aligned_cols=159 Identities=25% Similarity=0.377 Sum_probs=143.7
Q ss_pred HHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC
Q 013339 5 DIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQ 84 (445)
Q Consensus 5 d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~ 84 (445)
++++.|++.+.+++ ..|.+|+||||+||..|+.++|++|++.++++.. ++.+|.||+|+|+..|+.++++.|++.+ .
T Consensus 67 ~~v~~Ll~~Gadvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~ 143 (269)
T 4b93_B 67 KRLAKVPASGLGVN-VTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHLACQQGHFQVVKCLLDSN-A 143 (269)
T ss_dssp --------CCCCTT-CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTT-C
T ss_pred HHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCccccccccChHHHHHHHHHCC-C
Confidence 47788888888876 7899999999999999999999999999999976 8999999999999999999999999998 5
Q ss_pred ccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCC
Q 013339 85 SAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYT 164 (445)
Q Consensus 85 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~T 164 (445)
.++.+|..|+||||+|+.+|+.+++++|++. +.++|.+|.+|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus 144 ~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~---gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~T 220 (269)
T 4b93_B 144 KPNKKDLSGNTPLIYACSGGHHELVALLLQH---GASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRT 220 (269)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCGGGHHHHHHT---TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC---CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 6788899999999999999999999999998 7889999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 013339 165 ALDVV 169 (445)
Q Consensus 165 pl~~a 169 (445)
|||+|
T Consensus 221 pL~~A 225 (269)
T 4b93_B 221 AVDCA 225 (269)
T ss_dssp SGGGS
T ss_pred HHHHH
Confidence 99995
No 15
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=9.4e-30 Score=227.79 Aligned_cols=166 Identities=26% Similarity=0.332 Sum_probs=154.3
Q ss_pred hhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCc
Q 013339 15 QEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGE 94 (445)
Q Consensus 15 ~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~ 94 (445)
+.+.+.+|..|+||||+||..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|++.+ ..++.+|..|.
T Consensus 25 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~ 102 (192)
T 2rfm_A 25 DFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLED-KDIEGSTALIWAVKNNRLGIAEKLLSKG-SNVNTKDFSGK 102 (192)
T ss_dssp HHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSC
T ss_pred HHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccccc-ccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCC
Confidence 344567899999999999999999999999999999876 8999999999999999999999999998 56778899999
Q ss_pred chHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhcc
Q 013339 95 TVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDAS 174 (445)
Q Consensus 95 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~ 174 (445)
||||+|+..|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|+++|++++.+|..|.||+++ +.
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~----A~ 175 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEH---GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEAS----AR 175 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT---TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHH----HH
T ss_pred cHHHHHHHcCCHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH----HH
Confidence 999999999999999999998 77899999999999999999999999999999999999999999999999 55
Q ss_pred ccchhcHHHHHHHhc
Q 013339 175 NSGALQIVPALEEAG 189 (445)
Q Consensus 175 ~~~~~~i~~~L~~~g 189 (445)
..++.+++++|++.|
T Consensus 176 ~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 176 IFGRQEVIKIFTEVR 190 (192)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HhCcHHHHHHHHhcc
Confidence 667889999999875
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=9.3e-30 Score=238.14 Aligned_cols=179 Identities=22% Similarity=0.224 Sum_probs=164.4
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.|+++.|++.+.+++ ..|..|+||||+|+..|+.+++++|++.++.....+|..|.||||+|+..|+.++++.|++.
T Consensus 68 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 146 (253)
T 1yyh_A 68 SRSDAAKRLLEASADAN-IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS 146 (253)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc
Confidence 67899999999998876 77899999999999999999999999999844445899999999999999999999999998
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+ ..++.+|..|+||||+|+..|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|+++|++++.+|..
T Consensus 147 g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 222 (253)
T 1yyh_A 147 H-ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN---GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHM 222 (253)
T ss_dssp T-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred C-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccC
Confidence 8 56788899999999999999999999999998 7789999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhc
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEAG 189 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~g 189 (445)
|.||+++ +...++.+++++|....
T Consensus 223 g~tpl~~----A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 223 DRLPRDI----AQERMHHDIVRLLDLEH 246 (253)
T ss_dssp CCCHHHH----HHHTTCHHHHHHHHC--
T ss_pred CCCHHHH----HHHcCCHHHHHHHHHHh
Confidence 9999999 66778889999997543
No 17
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=2e-29 Score=237.13 Aligned_cols=180 Identities=21% Similarity=0.237 Sum_probs=164.3
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++.+.+++ ..|.+|+||||+|+..|+.++++.|+++|++++. +|.+|+||||+|+..|+.++++.|++.
T Consensus 14 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 91 (261)
T 2xai_A 14 GHQLSLRNLISQGWAVN-IITADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSGSWDCVNLLLQH 91 (261)
T ss_dssp TCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 57899999999988766 7889999999999999999999999999999976 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+... + .+.+|.||||+|+..|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|++.|++++. |..
T Consensus 92 g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~ 165 (261)
T 2xai_A 92 GASV-Q-PESDLASPIHEAARRGHVECVNSLIAY---GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKG 165 (261)
T ss_dssp TCCS-S-CSCTTCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBT
T ss_pred CCCC-C-CCCCCCCHHHHHHHcCcHHHHHHHHHc---CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCC
Confidence 8543 3 345699999999999999999999998 778999999999999999999999999999999999996 889
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
|.||||+| ...++.+++++|++.|++..
T Consensus 166 g~t~Lh~A----~~~~~~~~v~~Ll~~gad~~ 193 (261)
T 2xai_A 166 QDSPLHAV----ARTASEELACLLMDFGADTQ 193 (261)
T ss_dssp TBCHHHHH----HHHTCHHHHHHHHHTTCCTT
T ss_pred CCChHHHH----HHcCCHHHHHHHHHcCCCCC
Confidence 99999994 45577889999999998754
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=4.6e-29 Score=230.72 Aligned_cols=184 Identities=26% Similarity=0.277 Sum_probs=165.9
Q ss_pred CHHHHHHHHHHh---chhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHH
Q 013339 2 HVADIVKELLEA---RQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEI 78 (445)
Q Consensus 2 ~~~d~v~~Ll~~---~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~L 78 (445)
|+.|+++.|++. .....+..|..|.||||+|+..|+.+++++|++.|++++. +|..|.||||+|+..|+.++++.|
T Consensus 20 g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~L 98 (241)
T 1k1a_A 20 GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMA-LDRHGQTAAHLACEHRSPTCLRAL 98 (241)
T ss_dssp TCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHH
Confidence 678999999983 3333347889999999999999999999999999999876 799999999999999999999999
Q ss_pred HhcCCC---ccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCC-CCCCcHHHHHHhCCcHHHHHHHHhcCCC
Q 013339 79 LSLNLQ---SAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPD-NDGNTILHLATAGKLTTMVIYLLKLGVD 154 (445)
Q Consensus 79 l~~~~~---~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d-~~g~T~LHlA~~~~~~~iv~~Ll~~g~~ 154 (445)
++.++. ..+..+..|.||||+|+..|+.+++++|++. +..++..| ..|.||||+|+..++.+++++|++.|++
T Consensus 99 l~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 175 (241)
T 1k1a_A 99 LDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER---GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN 175 (241)
T ss_dssp HHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc---CCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999853 5677888999999999999999999999998 67788888 8899999999999999999999999999
Q ss_pred ccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 155 VNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 155 ~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
++..|..|.||||+| ...++.+++++|++.|++..
T Consensus 176 ~~~~~~~g~t~L~~A----~~~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 176 VNAQMYSGSSALHSA----SGRGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp TTCBCTTSCBHHHHH----HHHTCHHHHHHHHHTTCCTT
T ss_pred CCCcCCCCCCHHHHH----HHcCCHHHHHHHHhcCCCCC
Confidence 999999999999994 55677889999999998754
No 19
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=3.3e-30 Score=241.31 Aligned_cols=184 Identities=22% Similarity=0.287 Sum_probs=160.7
Q ss_pred HHHHHHHhchhhhc---CCCCCCChHHHHHHHc---CCHHHHHHHhhcCCCCCCC----------CCCCCccHHHHHHHc
Q 013339 6 IVKELLEARQEFAW---KKDLNGHTPLHLSCSK---GHLEITRELLKLDPDLSSL----------PDNEGRTPLHWAAIK 69 (445)
Q Consensus 6 ~v~~Ll~~~~~~~~---~~d~~G~TpLH~Aa~~---g~~~iv~~LL~~~~~~~~~----------~d~~G~TpLh~Aa~~ 69 (445)
+++.|++.+.+++. ..|..|+||||+|+.. |+.++++.|++.|++.... +|..|.||||+|+..
T Consensus 21 ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~ 100 (256)
T 2etb_A 21 LLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEK 100 (256)
T ss_dssp HHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHT
T ss_pred HHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHc
Confidence 66777778877764 3799999999999999 9999999999998776532 347899999999999
Q ss_pred CCHHHHHHHHhcCCCcccccccc-------------CcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHH
Q 013339 70 GRINIIDEILSLNLQSAEMRTIH-------------GETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLA 136 (445)
Q Consensus 70 G~~~iv~~Ll~~~~~~~~~~~~~-------------g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA 136 (445)
|+.++++.|++.+ ..++.++.. |+||||+|+..|+.+++++|++....+.++|.+|.+|+||||+|
T Consensus 101 g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A 179 (256)
T 2etb_A 101 RSLQCVKLLVENG-ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHAL 179 (256)
T ss_dssp TCHHHHHHHHHTT-CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHHHcC-CCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHH
Confidence 9999999999998 456666665 99999999999999999999993223788999999999999999
Q ss_pred Hh--CCcHH-------HHHHHHhcCCCc-------cccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013339 137 TA--GKLTT-------MVIYLLKLGVDV-------NAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 137 ~~--~~~~~-------iv~~Ll~~g~~~-------~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
+. .++.+ ++++|++.|+++ +.+|..|.||||+ |...++.+++++|+++|+....
T Consensus 180 ~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~----A~~~g~~~~v~~Ll~~g~~~~~ 249 (256)
T 2etb_A 180 VMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKL----AAKEGKIEIFRHILQREFSGAA 249 (256)
T ss_dssp HHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHH----HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHH----HHHhCCHHHHHHHHhCCCCCCC
Confidence 98 88888 999999999999 9999999999999 5566788999999999987543
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1.2e-28 Score=226.21 Aligned_cols=174 Identities=26% Similarity=0.338 Sum_probs=157.6
Q ss_pred CHHHHHHHHHHhc--hhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcC--CCCCCCCCCCCccHHHHHHHcCCHHHHHH
Q 013339 2 HVADIVKELLEAR--QEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLD--PDLSSLPDNEGRTPLHWAAIKGRINIIDE 77 (445)
Q Consensus 2 ~~~d~v~~Ll~~~--~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~--~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~ 77 (445)
++.|+++.|++.+ +++....|..|+||||+|+..|+.++++.|+++| ++++. +|..|.||||+|+..|+.+++++
T Consensus 47 ~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~ 125 (228)
T 2dzn_A 47 QAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNK-ITNQGVTCLHLAVGKKWFEVSQF 125 (228)
T ss_dssp TCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTC-CCTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccc-CCcCCCCHHHHHHHcCCHhHHHH
Confidence 5789999999999 5666558899999999999999999999999998 77765 79999999999999999999999
Q ss_pred HHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcc-cccCCCCCCCCcHHHHHHhCCcHHHHHHHH-hcCCCc
Q 013339 78 ILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNIT-KLANMPDNDGNTILHLATAGKLTTMVIYLL-KLGVDV 155 (445)
Q Consensus 78 Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll-~~g~~~ 155 (445)
|++.+ ...+.+|..|+||||+|+..|+.+++++|++. + ..+|.+|.+|+||||+|+..++.+++++|+ +.|+++
T Consensus 126 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 126 LIENG-ASVRIKDKFNQIPLHRAASVGSLKLIELLCGL---GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY 201 (228)
T ss_dssp HHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTT---TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS
T ss_pred HHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhc---CcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC
Confidence 99997 66788899999999999999999999999987 5 678999999999999999999999999999 999999
Q ss_pred cccccCCCCHHHHHhhhccccchhcHHHHHHH
Q 013339 156 NAINRKGYTALDVVESDASNSGALQIVPALEE 187 (445)
Q Consensus 156 ~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~ 187 (445)
+.+|..|.||+++| ... ++.++|++
T Consensus 202 ~~~~~~g~t~l~~A----~~~---~~~~~l~~ 226 (228)
T 2dzn_A 202 DLVDNKGAKAEDVA----LNE---QVKKFFLN 226 (228)
T ss_dssp CCBCTTSCBGGGGC----SST---THHHHHHT
T ss_pred CccCCCCCcHHHHH----HHH---HHHHHHHh
Confidence 99999999999994 333 46666654
No 21
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=7.1e-29 Score=216.85 Aligned_cols=161 Identities=24% Similarity=0.328 Sum_probs=150.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHc
Q 013339 24 NGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKN 103 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 103 (445)
.|.||||.|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|++.+ ..++..+..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINH-TDEEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCC-CCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHc
Confidence 589999999999999999999999998866 8999999999999999999999999997 56778899999999999999
Q ss_pred CCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHH
Q 013339 104 NQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVP 183 (445)
Q Consensus 104 g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~ 183 (445)
|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|+++|++++..|..|.||+++ +...++.++++
T Consensus 80 ~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~----A~~~~~~~~~~ 152 (167)
T 3v31_A 80 GYTDIVKMLLDC---GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDL----AVALGYRSVQQ 152 (167)
T ss_dssp TCHHHHHHHHHH---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----HHHHTCHHHHH
T ss_pred CCHHHHHHHHHC---CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH----HHHcCcHHHHH
Confidence 999999999998 77899999999999999999999999999999999999999999999999 55567888999
Q ss_pred HHHHhcCccc
Q 013339 184 ALEEAGARRC 193 (445)
Q Consensus 184 ~L~~~ga~~~ 193 (445)
+|++++++..
T Consensus 153 ~L~~~~~~~~ 162 (167)
T 3v31_A 153 VIESHLLKLL 162 (167)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 22
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=235.29 Aligned_cols=180 Identities=20% Similarity=0.224 Sum_probs=163.2
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++.+.+++ ..|.+|+||||+||..|+.++++.|+++|++++. +|.+|.||||+|+..|+.++++.|++.
T Consensus 70 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 147 (285)
T 3d9h_A 70 GHQLSLRNLISQGWAVN-IITADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSGSWDCVNLLLQH 147 (285)
T ss_dssp TCHHHHHHHHHTTCCSC-EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCHHHHHHHHHHC
Confidence 67899999999988866 7788999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+... +. +.+|.||||+|+..|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|++.|++++. |..
T Consensus 148 g~~~-~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~---g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~ 221 (285)
T 3d9h_A 148 GASV-QP-ESDLASPIHEAARRGHVECVNSLIAY---GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKG 221 (285)
T ss_dssp TCCS-SC-SCTTSCHHHHHHHHTCHHHHHHHHHT---TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBT
T ss_pred CCCC-CC-CCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCC
Confidence 8543 32 34599999999999999999999998 678899999999999999999999999999999999995 899
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
|.|||++ +...++.+++++|++.|++..
T Consensus 222 g~t~L~~----A~~~~~~~~v~~Ll~~gad~~ 249 (285)
T 3d9h_A 222 QDSPLHA----VVRTASEELACLLMDFGADTQ 249 (285)
T ss_dssp TBCHHHH----HHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCHHHH----HHHcCCHHHHHHHHHCCCCCC
Confidence 9999999 455677899999999998753
No 23
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=5.3e-29 Score=230.28 Aligned_cols=179 Identities=25% Similarity=0.292 Sum_probs=159.6
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCC----CCCCCCCCCCccHHHHHHHcCCHHHHHH
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDP----DLSSLPDNEGRTPLHWAAIKGRINIIDE 77 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~----~~~~~~d~~G~TpLh~Aa~~G~~~iv~~ 77 (445)
++.|+++.|++.+.++. ..|..|.||||+|+..|+.++++.|++.++ ++.. .|..|.||||+|+..|+.++++.
T Consensus 57 ~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~ 134 (241)
T 1k1a_A 57 TLPSVVRLLVTAGASPM-ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA-RNYDGLTALHVAVNTECQETVQL 134 (241)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTC-CCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccc-cCcCCCcHHHHHHHcCCHHHHHH
Confidence 57899999999998876 678899999999999999999999999987 5544 78999999999999999999999
Q ss_pred HHhcCCCcccccc-ccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCcc
Q 013339 78 ILSLNLQSAEMRT-IHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVN 156 (445)
Q Consensus 78 Ll~~~~~~~~~~~-~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~ 156 (445)
|++.+. ..+..+ ..|.||||+|+.+|+.+++++|+++ +..++.+|.+|+||||+|+..++.+++++|+++|++++
T Consensus 135 Ll~~g~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 135 LLERGA-DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH---GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp HHHTTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHcCC-CcccccccCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 999985 455555 7899999999999999999999998 77899999999999999999999999999999999999
Q ss_pred ccccCCCCHHHHHhhhccccchhcHHHHHHHhcC
Q 013339 157 AINRKGYTALDVVESDASNSGALQIVPALEEAGA 190 (445)
Q Consensus 157 ~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga 190 (445)
.+|..|.||+++ +...++.++++.|.+.++
T Consensus 211 ~~~~~g~tpl~~----A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 211 LKNCHNDTPLMV----ARSRRVIDILRGKATRPA 240 (241)
T ss_dssp CCCTTSCCTTTT----CSSHHHHHHHTC------
T ss_pred CcCCCCCCHHHH----HHhcCcHHHHhhhccCCC
Confidence 999999999999 777888889988876543
No 24
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=6.8e-29 Score=244.65 Aligned_cols=185 Identities=22% Similarity=0.313 Sum_probs=144.1
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCC---------------------------
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSL--------------------------- 54 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~--------------------------- 54 (445)
|+.++|+.|++.+.+++ ..|..|+||||+||..|+.++|++|+++|++....
T Consensus 31 g~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 109 (364)
T 3ljn_A 31 GQTDEVRRLIETGVSPT-IQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKE 109 (364)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCcc-ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccc
Confidence 56789999999887765 77888999999999999999999999888755430
Q ss_pred ------------------------CCCCCccHHHHHHHcC--CHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHH
Q 013339 55 ------------------------PDNEGRTPLHWAAIKG--RINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEA 108 (445)
Q Consensus 55 ------------------------~d~~G~TpLh~Aa~~G--~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~ 108 (445)
+|..|.||||+|+..| +.+++++|++.+ ..++.+|..|+||||+|+.+|+.++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~g~~~~ 188 (364)
T 3ljn_A 110 RGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG-ASPTAKDKADETPLMRAMEFRNREA 188 (364)
T ss_dssp HTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred cCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHH
Confidence 3446777777777777 777777777776 4566677778888888888888888
Q ss_pred HHHHHHhcCc--ccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHH
Q 013339 109 VKYLMETLNI--TKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALE 186 (445)
Q Consensus 109 v~~Ll~~~~~--~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~ 186 (445)
+++|++.... +..+|.+|..|+||||+|+..++.+++++|+++|++++..|..|.|||++ +...++.+++++|+
T Consensus 189 v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~----A~~~g~~~~v~~Ll 264 (364)
T 3ljn_A 189 LDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYL----SVRAAMVLLTKELL 264 (364)
T ss_dssp HHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH----HHHTCCHHHHHHHH
T ss_pred HHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH----HHHhChHHHHHHHH
Confidence 8888876211 11277888888888888888888888888888888888888888888888 44557788888888
Q ss_pred HhcCcc
Q 013339 187 EAGARR 192 (445)
Q Consensus 187 ~~ga~~ 192 (445)
+.|+..
T Consensus 265 ~~~~~~ 270 (364)
T 3ljn_A 265 QKTDVF 270 (364)
T ss_dssp HHSCHH
T ss_pred HcCCch
Confidence 888764
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=4.4e-29 Score=236.05 Aligned_cols=183 Identities=28% Similarity=0.318 Sum_probs=141.1
Q ss_pred CHHHHHHHHHHhchhh-------hcCCCCCCChHHHHHHHcCCH-HHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHH
Q 013339 2 HVADIVKELLEARQEF-------AWKKDLNGHTPLHLSCSKGHL-EITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRIN 73 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~-------~~~~d~~G~TpLH~Aa~~g~~-~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~ 73 (445)
|+.|+|+.||+.+.+. ....|..|.||||+|+..++. ++++.|++.|++++. +|.+|+||||+|+..|+.+
T Consensus 22 G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~-~d~~G~TpLh~A~~~g~~~ 100 (269)
T 4b93_B 22 GDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNV-TSQDGSSPLHVAALHGRAD 100 (269)
T ss_dssp TCHHHHHHHHTCC----------------------------------------CCCCTTC-CCTTSCCHHHHHHHTTCTT
T ss_pred CCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCcHH
Confidence 6789999999987653 235677899999999998876 488999999999976 8999999999999999999
Q ss_pred HHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCC
Q 013339 74 IIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGV 153 (445)
Q Consensus 74 iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~ 153 (445)
++++|++.+ .....++.+|.||+|.|+..++.+++++|++. +..+|.+|.+|+||||+|+..|+.+++++|+++|+
T Consensus 101 ~v~~Ll~~~-a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~---g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga 176 (269)
T 4b93_B 101 LIPLLLKHG-ANAGARNADQAVPLHLACQQGHFQVVKCLLDS---NAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGA 176 (269)
T ss_dssp HHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTC
T ss_pred HHHHHHhcC-CCcCccCCCCCCccccccccChHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Confidence 999999998 56778889999999999999999999999998 77899999999999999999999999999999999
Q ss_pred CccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 154 DVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 154 ~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
++|..|..|.||||+ |...++.+++++|++.|++..
T Consensus 177 dvn~~~~~g~t~Lh~----A~~~g~~~~v~~Ll~~Gad~~ 212 (269)
T 4b93_B 177 SINASNNKGNTALHE----AVIEKHVFVVELLLLHGASVQ 212 (269)
T ss_dssp CTTCBCTTSCBHHHH----HHHTTCHHHHHHHHHTTCCSC
T ss_pred CCCccccCCCcHHHH----HHHcCCHHHHHHHHHCCCCCC
Confidence 999999999999999 556678899999999998754
No 26
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=2.1e-28 Score=225.93 Aligned_cols=164 Identities=25% Similarity=0.343 Sum_probs=151.4
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
++.|+++.|++.+.++. ..|..|.||||+|+..|+.+++++|++.++......|..|.||||+|+..|+.+++++|++.
T Consensus 55 ~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 133 (237)
T 3b7b_A 55 NHLEAVKYLIKAGALVD-PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK 133 (237)
T ss_dssp TCHHHHHHHHTTTCCCC-CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHhCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 57899999999987765 77889999999999999999999999999433344899999999999999999999999998
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+ ..++.++..|.||||+|+..|+.+++++|++. +..++.+|..|.||||+|+..++.+++++|+++|++++.+|..
T Consensus 134 g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 209 (237)
T 3b7b_A 134 G-SDINIRDNEENICLHWAAFSGCVDIAEILLAA---KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKE 209 (237)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTT---TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred C-CCCCccCCCCCCHHHHHHHCCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCC
Confidence 8 56778889999999999999999999999988 7789999999999999999999999999999999999999999
Q ss_pred CCCHHHHHh
Q 013339 162 GYTALDVVE 170 (445)
Q Consensus 162 G~Tpl~~a~ 170 (445)
|.||+++|.
T Consensus 210 g~t~l~~A~ 218 (237)
T 3b7b_A 210 GETPLQCAS 218 (237)
T ss_dssp SCCHHHHSC
T ss_pred CCCHHHHHH
Confidence 999999943
No 27
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=1.9e-28 Score=230.46 Aligned_cols=176 Identities=22% Similarity=0.314 Sum_probs=159.0
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.|+++.|++.+.+++ ..|..|+||||+|+..|+.++++.|+++|+++.. +.+|.||||+|+..|+.++++.|++.
T Consensus 47 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (261)
T 2xai_A 47 GHLSCVKILLKHGAQVN-GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAY 123 (261)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 57899999999988776 7889999999999999999999999999999864 56799999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+ ..++..|..|+||||+|+.+|+.+++++|++. +..+|. |.+|+||||+|+..++.+++++|++.|++++.+|.+
T Consensus 124 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~ 198 (261)
T 2xai_A 124 G-GNIDHKISHLGTPLYLACENQQRACVKKLLES---GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAE 198 (261)
T ss_dssp T-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHH---TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred C-CCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHc---CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 8 56788899999999999999999999999998 667774 889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
|.||+|+|. ...+++++|++.+..
T Consensus 199 g~tpl~~A~------~~~~~~~~ll~~~~~ 222 (261)
T 2xai_A 199 GKRPVELVP------PESPLAQLFLEREGP 222 (261)
T ss_dssp SCCGGGGSC------TTCTHHHHHHHC-CC
T ss_pred CCChhhhcc------ccccHHHHHHhccCC
Confidence 999999953 234588999887654
No 28
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=2.1e-28 Score=233.99 Aligned_cols=185 Identities=24% Similarity=0.333 Sum_probs=160.1
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++.+.+++ ..|..|.||||+||..|+.+++++|+++|++++. +|..|+||||+|+..|+.+++++|+++
T Consensus 51 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 128 (299)
T 1s70_B 51 GDTEEVLRLLERGADIN-YANVDGLTALHQACIDDNVDMVKFLVENGANINQ-PDNEGWIPLHAAASCGYLDIAEYLISQ 128 (299)
T ss_dssp TCHHHHHHHHHHCCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhC
Confidence 57899999999998876 6788999999999999999999999999999976 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcc------------------------cccCCCCCCCCcHHHHHH
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNIT------------------------KLANMPDNDGNTILHLAT 137 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~------------------------~~~n~~d~~g~T~LHlA~ 137 (445)
+ ...+..+..|.||||+|+..++.+++++++...... ......+..|.||||+|+
T Consensus 129 g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~ 207 (299)
T 1s70_B 129 G-AHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAA 207 (299)
T ss_dssp T-CCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHH
T ss_pred C-CCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHH
Confidence 8 567778889999999999999999988877642211 112345678999999999
Q ss_pred hCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 138 AGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 138 ~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
..++.+++++|++.|++++..|..|.||||+ +...++.+++++|++.|++..
T Consensus 208 ~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~----A~~~~~~~~v~~Ll~~gad~~ 259 (299)
T 1s70_B 208 AKGYTEVLKLLIQARYDVNIKDYDGWTPLHA----AAHWGKEEACRILVENLCDME 259 (299)
T ss_dssp HHTCHHHHHHHHTTTCCTTCCCTTCCCHHHH----HHHTTCHHHHHHHHHTTCCTT
T ss_pred HCCcHHHHHHHHHcCCCCCCcCCCCCcHHHH----HHhcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999 455677889999999998754
No 29
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=4.8e-28 Score=228.88 Aligned_cols=183 Identities=23% Similarity=0.248 Sum_probs=112.2
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
++.|+++.|++.+.++. ..|..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++.
T Consensus 50 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 127 (285)
T 1wdy_A 50 SREDIVELLLRHGADPV-LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNE-CDFYGFTAFMEAAVYGKVKALKFLYKR 127 (285)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCcccCCHHHHHHHhCCHHHHHHHHHh
Confidence 34555555555554443 4455555555555555555555555555555543 455555555555555555555555554
Q ss_pred C-------------------------------------------CCccccccccCcchHhHHHHcCC----HHHHHHHHH
Q 013339 82 N-------------------------------------------LQSAEMRTIHGETVLHLTVKNNQ----YEAVKYLME 114 (445)
Q Consensus 82 ~-------------------------------------------~~~~~~~~~~g~t~Lh~A~~~g~----~~~v~~Ll~ 114 (445)
+ +...+..|..|+||||.|+..++ .+++++|++
T Consensus 128 g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~ 207 (285)
T 1wdy_A 128 GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD 207 (285)
T ss_dssp TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH
T ss_pred CCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHH
Confidence 4 23344444445555555555444 445555544
Q ss_pred hcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHh-cCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 115 TLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLK-LGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 115 ~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~-~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
. +..++.+|.+|+||||+|+..++.+++++|++ .|++++..|..|.||+++ +...++.+++++|+++|++..
T Consensus 208 ~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~----A~~~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 208 H---GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLL----AVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp T---TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHH----HHHTTCHHHHHHHHHHSSCSC
T ss_pred c---CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHH----HHHcCcHHHHHHHHHcCCCCC
Confidence 4 45567777778888888888888888888886 788888888888888888 444566778888888887653
No 30
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.8e-28 Score=214.91 Aligned_cols=161 Identities=29% Similarity=0.361 Sum_probs=146.8
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhH
Q 013339 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 99 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~ 99 (445)
.....+.||||.||..|+.++++.|+++|++++. +|..|.||||+|+..|+.+++++|++.+ ...+..|..|.||||+
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~ 86 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNA-EDASGWTPLHLAAFNGHLEIVEVLLKNG-ADVNAVDHAGMTPLRL 86 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHH
Confidence 3456688999999999999999999999999976 8999999999999999999999999997 5677888999999999
Q ss_pred HHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchh
Q 013339 100 TVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGAL 179 (445)
Q Consensus 100 A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~ 179 (445)
|+..|+.+++++|+++ +..++.+|.+|+||||+|+..++.+++++|+++|++++..|..|.||+++ +...++.
T Consensus 87 A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~----A~~~~~~ 159 (169)
T 2y1l_E 87 AALFGHLEIVEVLLKN---GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDI----SIDNGNE 159 (169)
T ss_dssp HHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----HHHTTCH
T ss_pred HHHcCCHHHHHHHHHc---CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH----HHHhCCH
Confidence 9999999999999998 77889999999999999999999999999999999999999999999999 5556788
Q ss_pred cHHHHHHHhc
Q 013339 180 QIVPALEEAG 189 (445)
Q Consensus 180 ~i~~~L~~~g 189 (445)
+++++|++.|
T Consensus 160 ~~~~~L~~~G 169 (169)
T 2y1l_E 160 DLAEILQKLN 169 (169)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHHcC
Confidence 8999998765
No 31
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=3.8e-28 Score=236.86 Aligned_cols=94 Identities=29% Similarity=0.311 Sum_probs=73.3
Q ss_pred CcchHhHHHHc---CCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHH
Q 013339 93 GETVLHLTVKN---NQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVV 169 (445)
Q Consensus 93 g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a 169 (445)
|.||||+|+.. +..+++++|++. +..+|.+|.+|+||||+|+..++.+++++|+++|++++.+|..|.||||+
T Consensus 211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~- 286 (351)
T 3utm_A 211 HETALHCAVASLHPKRKQVAELLLRK---GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHR- 286 (351)
T ss_dssp CCCHHHHHHHCCSTTHHHHHHHHHHT---TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH-
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHc---CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH-
Confidence 34444444444 224444444444 45678889999999999999999999999999999999999999999999
Q ss_pred hhhccccchhcHHHHHHHhcCccc
Q 013339 170 ESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 170 ~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
+...++.+++++|++.|++..
T Consensus 287 ---A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 287 ---AALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp ---HHHHTCHHHHHHHHHTTCCTT
T ss_pred ---HHHcCcHHHHHHHHHcCCCCC
Confidence 455678889999999998753
No 32
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=1.5e-28 Score=214.41 Aligned_cols=161 Identities=24% Similarity=0.304 Sum_probs=145.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHH
Q 013339 21 KDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLT 100 (445)
Q Consensus 21 ~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A 100 (445)
.|.+|.||||.|+..|+.++++.|++.++......+..|.||||+|+..|+.+++++|++.+ ..++.+|..|+||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcC-CCCCccCCCCCCHHHHH
Confidence 46789999999999999999999999665544557889999999999999999999999998 56788899999999999
Q ss_pred HHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhc
Q 013339 101 VKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQ 180 (445)
Q Consensus 101 ~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~ 180 (445)
+..|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|+++|++++.+|..|.||+++ +.. ++.+
T Consensus 83 ~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~----a~~-~~~~ 154 (165)
T 3twr_A 83 CSYGHYEVAELLVKH---GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL----VKD-GDTD 154 (165)
T ss_dssp HHTTCHHHHHHHHHT---TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGG----SCT-TCHH
T ss_pred HHcCcHHHHHHHHhC---CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHh----Hhc-CChH
Confidence 999999999999998 77899999999999999999999999999999999999999999999999 444 6679
Q ss_pred HHHHHHHhcC
Q 013339 181 IVPALEEAGA 190 (445)
Q Consensus 181 i~~~L~~~ga 190 (445)
++++|++.|+
T Consensus 155 i~~~L~~~gA 164 (165)
T 3twr_A 155 IQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHhhccc
Confidence 9999998875
No 33
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=9.9e-28 Score=226.74 Aligned_cols=187 Identities=26% Similarity=0.310 Sum_probs=169.2
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..|+++.|++.+++++...+..|+||||+|+..|+.+++++|+++|++++. +|.+|.||||+|+..|+.++++.|+++
T Consensus 16 g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 94 (285)
T 1wdy_A 16 EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL-RKKNGATPFLLAAIAGSVKLLKLFLSK 94 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 6789999999999998866688999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCC----------CCCCCcHHHHHHhCCcHHHHHHHHhc
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMP----------DNDGNTILHLATAGKLTTMVIYLLKL 151 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~----------d~~g~T~LHlA~~~~~~~iv~~Ll~~ 151 (445)
+ ...+..+..|.||||+|+..|+.+++++|++. +..++.+ +..|.||||.|+..++.+++++|++.
T Consensus 95 g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 170 (285)
T 1wdy_A 95 G-ADVNECDFYGFTAFMEAAVYGKVKALKFLYKR---GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 170 (285)
T ss_dssp T-CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT---TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred C-CCCCccCcccCCHHHHHHHhCCHHHHHHHHHh---CCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 8 56778889999999999999999999999998 5555555 78899999999999999999999976
Q ss_pred -CCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 152 -GVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 152 -g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
|++++..|..|.||++.+..........+++++|++.|++..
T Consensus 171 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~ 213 (285)
T 1wdy_A 171 MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN 213 (285)
T ss_dssp SCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS
T ss_pred cCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCC
Confidence 999999999999999997766555555889999999987643
No 34
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=3.5e-28 Score=231.77 Aligned_cols=176 Identities=23% Similarity=0.333 Sum_probs=158.4
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++.+.+++ ..|..|.||||+|+..|+.++++.|++.|+++.. +.+|.||||+|+..|+.++++.|++.
T Consensus 103 g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ 179 (285)
T 3d9h_A 103 GHLSCVKILLKHGAQVN-GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAY 179 (285)
T ss_dssp TCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTSCHHHHHHHHTCHHHHHHHHHT
T ss_pred CcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 67899999999988776 7889999999999999999999999999999864 55699999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+ ..++.+|.+|+||||+|+.+|+.+++++|++. +..++ .|..|+||||+|+..++.+++++|++.|++++.+|.+
T Consensus 180 g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 254 (285)
T 3d9h_A 180 G-GNIDHKISHLGTPLYLACENQQRACVKKLLES---GADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAE 254 (285)
T ss_dssp T-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT---TCCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred C-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC---CCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 8 56788899999999999999999999999998 66677 4899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHh-cCc
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEA-GAR 191 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~-ga~ 191 (445)
|.||+++|. ++.+++++|++. |++
T Consensus 255 g~t~l~~A~------~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 255 GKRPVELVP------PESPLAQLFLEREGAS 279 (285)
T ss_dssp SCCGGGGSC------TTSHHHHHHHHHC---
T ss_pred CCCHHHHhc------CccHHHHHHHHhhccC
Confidence 999999953 335799999988 544
No 35
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=233.58 Aligned_cols=179 Identities=24% Similarity=0.315 Sum_probs=160.5
Q ss_pred HHHHHHHHHHhchh-hhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCC-CCCCCCCCCCccHHHHHH-----HcCCHHHH
Q 013339 3 VADIVKELLEARQE-FAWKKDLNGHTPLHLSCSKGHLEITRELLKLDP-DLSSLPDNEGRTPLHWAA-----IKGRINII 75 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~-~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~-~~~~~~d~~G~TpLh~Aa-----~~G~~~iv 75 (445)
..+.++.+++...+ ..+..|.+|+||||+||..|+.++++.|++.|+ +++. .|..|.||||+|+ ..|+.+++
T Consensus 88 ~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~g~tpL~~a~~~~~~~~~~~~~v 166 (276)
T 4hbd_A 88 HLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDK-QNRAGYSPIMLTALATLKTQDDIETV 166 (276)
T ss_dssp HHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTC-CCTTSCCHHHHGGGCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCC-CCCCCCCHHHHHHHHHhhhhhhHHHH
Confidence 45667777776655 346889999999999999999999999999998 5544 8999999999999 67899999
Q ss_pred HHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHh-cCCC
Q 013339 76 DEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLK-LGVD 154 (445)
Q Consensus 76 ~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~-~g~~ 154 (445)
+.|++.+ ......+..|+||||+|+.+|+.+++++|++. +.++|.+|.+|+||||+|+..++.+++++|++ .|++
T Consensus 167 ~~Ll~~g-~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~---gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad 242 (276)
T 4hbd_A 167 LQLFRLG-NINAKASQAGQTALMLAVSHGRVDVVKALLAC---EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCD 242 (276)
T ss_dssp HHHHHHS-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC
T ss_pred HHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhC---CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC
Confidence 9999998 56677788999999999999999999999998 78899999999999999999999999999998 8999
Q ss_pred ccccccCCCCHHHHHhhhccccchhcHHHHHHHhcC
Q 013339 155 VNAINRKGYTALDVVESDASNSGALQIVPALEEAGA 190 (445)
Q Consensus 155 ~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga 190 (445)
++..|..|.|||++ +...++.+++++|++.+.
T Consensus 243 ~~~~d~~g~TpL~~----A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 243 ISLTDRDGSTALMV----ALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp TTCCCTTSCCHHHH----HHHHTCHHHHHHHHHHCC
T ss_pred CcCcCCCCCCHHHH----HHHcCCHHHHHHHHhccC
Confidence 99999999999999 555678899999998753
No 36
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.7e-28 Score=213.02 Aligned_cols=159 Identities=26% Similarity=0.354 Sum_probs=145.7
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHH
Q 013339 23 LNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVK 102 (445)
Q Consensus 23 ~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~ 102 (445)
+...||||.|+..|+.++++.|++.|++++. +|..|+||||+|+. |+.+++++|++.+ ..++.++..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNA-QNGFGRTALQVMKL-GNPEIARRLLLRG-ANPDLKDRTGFAVIHDAAR 79 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTC-CCTTSCCHHHHCCS-SCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccc-cCccCccHHHHHHc-CcHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHH
Confidence 3577999999999999999999999999976 89999999999999 9999999999997 5677889999999999999
Q ss_pred cCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCC-ccccccCCCCHHHHHhhhccccchhcH
Q 013339 103 NNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD-VNAINRKGYTALDVVESDASNSGALQI 181 (445)
Q Consensus 103 ~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~-~~~~n~~G~Tpl~~a~~~a~~~~~~~i 181 (445)
.|+.+++++|+++ +..++.+|.+|+||||+|+..++.+++++|+++|++ ++..|..|.||+++ +...++.++
T Consensus 80 ~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~----A~~~~~~~~ 152 (162)
T 1ihb_A 80 AGFLDTLQTLLEF---QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDL----ARLYGRNEV 152 (162)
T ss_dssp HTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHH----HHHTTCHHH
T ss_pred cCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHH----HHHcCCHHH
Confidence 9999999999997 778999999999999999999999999999999998 69999999999999 556678899
Q ss_pred HHHHHHhcCc
Q 013339 182 VPALEEAGAR 191 (445)
Q Consensus 182 ~~~L~~~ga~ 191 (445)
+++|+++|++
T Consensus 153 ~~~Ll~~GAd 162 (162)
T 1ihb_A 153 VSLMQANGAG 162 (162)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHHhCCC
Confidence 9999999974
No 37
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=2.6e-29 Score=237.66 Aligned_cols=185 Identities=24% Similarity=0.289 Sum_probs=156.2
Q ss_pred CHHHHHHHHHHhch----hhh---cCCCCCCChHHHHHHHc---CCHHHHHHHhhcCCCCC----------CCCCCCCcc
Q 013339 2 HVADIVKELLEARQ----EFA---WKKDLNGHTPLHLSCSK---GHLEITRELLKLDPDLS----------SLPDNEGRT 61 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~----~~~---~~~d~~G~TpLH~Aa~~---g~~~iv~~LL~~~~~~~----------~~~d~~G~T 61 (445)
|+.++|+.|++... +++ ...|..|+||||+||.. |+.++|++|++.|++.. ..+|..|+|
T Consensus 24 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~t 103 (273)
T 2pnn_A 24 SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQT 103 (273)
T ss_dssp TCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCC
T ss_pred CCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCC
Confidence 45677777777543 222 14588999999999987 99999999999876421 115678999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccccc--------------cCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCC
Q 013339 62 PLHWAAIKGRINIIDEILSLNLQSAEMRTI--------------HGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDN 127 (445)
Q Consensus 62 pLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~--------------~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~ 127 (445)
|||+|+..|+.+++++|++++ ..++.++. .|+||||+|+..|+.+++++|++....+.++|.+|.
T Consensus 104 pL~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~ 182 (273)
T 2pnn_A 104 ALHIAIERRNMTLVTLLVENG-ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDS 182 (273)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT
T ss_pred HHHHHHHcCCHHHHHHHHHCC-CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCC
Confidence 999999999999999999998 45666665 799999999999999999999993212788999999
Q ss_pred CCCcHHHHHHhCCc---------HHHHHHHHhcCCCcc-------ccccCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013339 128 DGNTILHLATAGKL---------TTMVIYLLKLGVDVN-------AINRKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 128 ~g~T~LHlA~~~~~---------~~iv~~Ll~~g~~~~-------~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
+|+||||+|+..++ .+++++|++.|++++ ..|..|.|||++ +...++.+++++|++.|++
T Consensus 183 ~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~----A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 183 VGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLAL----AASSGKIGVLAYILQREIH 258 (273)
T ss_dssp TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHH----HHHTTCHHHHHHHHHHHTC
T ss_pred CCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHH----HHHhChHHHHHHHHHCCCC
Confidence 99999999999887 799999999999996 589999999999 5566788999999999995
No 38
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=2.3e-29 Score=235.98 Aligned_cols=185 Identities=22% Similarity=0.234 Sum_probs=154.6
Q ss_pred HHHHHHHhchhhhc---CCCCCCChHHHHHH---HcCCHHHHHHHhhcCCCCC----------CCCCCCCccHHHHHHHc
Q 013339 6 IVKELLEARQEFAW---KKDLNGHTPLHLSC---SKGHLEITRELLKLDPDLS----------SLPDNEGRTPLHWAAIK 69 (445)
Q Consensus 6 ~v~~Ll~~~~~~~~---~~d~~G~TpLH~Aa---~~g~~~iv~~LL~~~~~~~----------~~~d~~G~TpLh~Aa~~ 69 (445)
+++.+++.+.+++. ..|..|+||||+|+ +.|+.++++.|++.|++.. ...|..|+||||+|+..
T Consensus 24 ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~ 103 (260)
T 3jxi_A 24 LLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIER 103 (260)
T ss_dssp HHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHT
T ss_pred HHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHc
Confidence 44444457766652 33578999999999 7799999999999875421 22466899999999999
Q ss_pred CCHHHHHHHHhcCCCcccccc--------------ccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHH
Q 013339 70 GRINIIDEILSLNLQSAEMRT--------------IHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHL 135 (445)
Q Consensus 70 G~~~iv~~Ll~~~~~~~~~~~--------------~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHl 135 (445)
|+.++++.|++.+ ..++.++ ..|+||||+|+..|+.+++++|++....+.++|.+|.+|+||||+
T Consensus 104 g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~ 182 (260)
T 3jxi_A 104 RCKHYVELLVEKG-ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHA 182 (260)
T ss_dssp TCHHHHHHHHHTT-CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHH
T ss_pred CCHHHHHHHHhCC-CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHH
Confidence 9999999999998 4566666 579999999999999999999999321278899999999999999
Q ss_pred HHhCCc---------HHHHHHHHhcCCCc-------cccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccCC
Q 013339 136 ATAGKL---------TTMVIYLLKLGVDV-------NAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCDQ 195 (445)
Q Consensus 136 A~~~~~---------~~iv~~Ll~~g~~~-------~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~~ 195 (445)
|+..++ .+++++|+++|+++ +..|..|.||||+ |...++.+++++|+++|+.....
T Consensus 183 A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~----A~~~g~~~~v~~Ll~~g~~~~~~ 254 (260)
T 3jxi_A 183 LVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMM----AAKTGKIGIFQHIIRREIADAAA 254 (260)
T ss_dssp HHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHH----HHHTTCHHHHHHHHHHHHHHHC-
T ss_pred HHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHH----HHHcCCHHHHHHHHHhCCCcccc
Confidence 998776 69999999999999 7899999999999 55668899999999999876543
No 39
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=7.8e-29 Score=236.30 Aligned_cols=179 Identities=20% Similarity=0.200 Sum_probs=152.3
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++.+.+++.. +|+||||+|+..|+.+++++|+++|++++. +|..|+||||+|+..|+.+++++|+++
T Consensus 42 g~~~~v~~Ll~~g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 117 (285)
T 3kea_A 42 NNVRLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILLFSGLDDSQ-FDDKGNTALYYAVDSGNMQTVKLFVKK 117 (285)
T ss_dssp TCHHHHHHHHHTTGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHHhc
Confidence 5678999999998887633 489999999999999999999999999876 788999999999999999999999998
Q ss_pred CCCccccccccC-cchHhHHHHcCCHHHHHHHHHhcCcccccCCCCC-CCCcHHHHHHhCCcHHHHHHHHhcCCCccccc
Q 013339 82 NLQSAEMRTIHG-ETVLHLTVKNNQYEAVKYLMETLNITKLANMPDN-DGNTILHLATAGKLTTMVIYLLKLGVDVNAIN 159 (445)
Q Consensus 82 ~~~~~~~~~~~g-~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~-~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n 159 (445)
+ ..++.++..| .||||+|+..|+.+++++|+++. ... .|. .|.||||+|+..++.+++++|+++|++++..|
T Consensus 118 g-a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g---~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~ 191 (285)
T 3kea_A 118 N-WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI---PST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNN 191 (285)
T ss_dssp C-GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS---CTT--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTC
T ss_pred C-CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC---Ccc--ccccCCccHHHHHHHcChHHHHHHHHHcCCCCCccc
Confidence 7 5677788888 79999999999999999999873 222 333 88999999999999999999999999999999
Q ss_pred cCCCCH-HHHHhhhccccchhcHHHHHHHhcCcccC
Q 013339 160 RKGYTA-LDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 160 ~~G~Tp-l~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
..|.|| |++ +...++.+++++|+++|++...
T Consensus 192 ~~g~t~~L~~----A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 192 SLLFIPDIKL----AIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp CCBCCTTHHH----HHHHTCHHHHHHHTTSCBCSTT
T ss_pred CCCCChHHHH----HHHcCCHHHHHHHHHcCCCCCC
Confidence 999997 999 4456678899999988887543
No 40
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=2.3e-28 Score=214.67 Aligned_cols=161 Identities=26% Similarity=0.363 Sum_probs=146.0
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcC
Q 013339 25 GHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNN 104 (445)
Q Consensus 25 G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g 104 (445)
+.||||.|+..|+.++++.|++.+++....+|..|+||||+|+..|+.+++++|++.+ ...+.++..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG-ADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCchhhcccCCCHHHHHHHCC
Confidence 5789999999999999999999998855558999999999999999999999999998 567788889999999999999
Q ss_pred CHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHH
Q 013339 105 QYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPA 184 (445)
Q Consensus 105 ~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~ 184 (445)
+.+++++|+++ +..++.+|.+|+||||+|+..++.+++++|+++|++++..|..|.||+++ +...++.+++++
T Consensus 81 ~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~----A~~~~~~~~~~~ 153 (172)
T 3v30_A 81 YTDIVGLLLER---DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDL----AVALGYRKVQQV 153 (172)
T ss_dssp CHHHHHHHHTT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----HHHHTCHHHHHH
T ss_pred CHHHHHHHHHc---CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH----HHHhCcHHHHHH
Confidence 99999999987 77889999999999999999999999999999999999999999999999 555678889999
Q ss_pred HHHhcCccc
Q 013339 185 LEEAGARRC 193 (445)
Q Consensus 185 L~~~ga~~~ 193 (445)
|+++|++..
T Consensus 154 L~~~~~~~~ 162 (172)
T 3v30_A 154 IENHILKLF 162 (172)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHh
Confidence 999988754
No 41
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=3.7e-28 Score=229.90 Aligned_cols=165 Identities=21% Similarity=0.217 Sum_probs=139.5
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCC------------------------------
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDL------------------------------ 51 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~------------------------------ 51 (445)
|+.++++.|++.+.+++ ..|..|+||||+|+..|+.+++++|++++++.
T Consensus 56 g~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (282)
T 1oy3_D 56 GEASTVEKLYAAGAGVL-VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQP 134 (282)
T ss_dssp TCHHHHHHHHHTTCCSS-CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------------------------
T ss_pred CCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhcccc
Confidence 57899999999998876 77889999999999999999999999987652
Q ss_pred ----------------CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccc-ccCcchHhHHHHcCCHHHHHHHHH
Q 013339 52 ----------------SSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRT-IHGETVLHLTVKNNQYEAVKYLME 114 (445)
Q Consensus 52 ----------------~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~-~~g~t~Lh~A~~~g~~~~v~~Ll~ 114 (445)
...+|..|.||||+|+..|+.+++++|++.+. .++..+ ..|+||||+|+.+|+.+++++|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 213 (282)
T 1oy3_D 135 NPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA-DLNKPEPTCGRTPLHLAVEAQAASVLELLLK 213 (282)
T ss_dssp ---------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 12368899999999999999999999999984 455555 459999999999999999999999
Q ss_pred hcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhh
Q 013339 115 TLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVES 171 (445)
Q Consensus 115 ~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~ 171 (445)
+ +..++.+|..|+||||+|+..++.+++++|+++|++++.+|..|.||++++..
T Consensus 214 ~---gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 214 A---GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp T---TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred c---CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 8 78899999999999999999999999999999999999999999999999643
No 42
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=3.7e-28 Score=213.31 Aligned_cols=159 Identities=22% Similarity=0.214 Sum_probs=144.5
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..++++.|++.++...+..|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++.
T Consensus 13 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 91 (172)
T 3v30_A 13 GELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI-LAKERESALSLASTGGYTDIVGLLLER 91 (172)
T ss_dssp TCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-hcccCCCHHHHHHHCCCHHHHHHHHHc
Confidence 6789999999999997779999999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+ ...+.+|..|+||||+|+..|+.+++++|++. +..++.+|.+|.||||+|+..++.+++++|+++++++...|..
T Consensus 92 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~ 167 (172)
T 3v30_A 92 D-VDINIYDWNGGTPLLYAVRGNHVKCVEALLAR---GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLV 167 (172)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC---
T ss_pred C-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCC
Confidence 8 56788899999999999999999999999998 7789999999999999999999999999999999999999999
Q ss_pred CCCH
Q 013339 162 GYTA 165 (445)
Q Consensus 162 G~Tp 165 (445)
|.||
T Consensus 168 ~~~p 171 (172)
T 3v30_A 168 PADP 171 (172)
T ss_dssp ----
T ss_pred CCCC
Confidence 9887
No 43
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=6.7e-28 Score=222.20 Aligned_cols=185 Identities=25% Similarity=0.393 Sum_probs=131.5
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..|+++.|++.+.++. ..|..|.||||+|+..|+.++++.|++.++++....+..|.||||+|+..|+.++++.|++.
T Consensus 20 g~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ 98 (240)
T 3eu9_A 20 GIYERCRELVEAGYDVR-QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKY 98 (240)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred CChHHHHHHHHcCCCcC-CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHc
Confidence 56778888888876655 66777888888888888888888888888877765666688888888888888888888887
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcC-------------------------------cccccCCCCC-CC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLN-------------------------------ITKLANMPDN-DG 129 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-------------------------------~~~~~n~~d~-~g 129 (445)
+ ...+..+..|.||||.|+..|+.+++++|+++.. .+..++..+. .|
T Consensus 99 g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g 177 (240)
T 3eu9_A 99 G-ADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHK 177 (240)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTC
T ss_pred C-CCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCC
Confidence 6 4556667778888888888888888888877511 0223344444 66
Q ss_pred CcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcc
Q 013339 130 NTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 130 ~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
+||||+|+..++.+++++|+++|++++..|..|.||+++ +...++.+++++|++.++..
T Consensus 178 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~----A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 178 NTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDL----AKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHH----HHHTTCHHHHHHHHHHC---
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH----HHHcCcHHHHHHHHHhhhcc
Confidence 677777777777777777777777777777777777777 44455666777777766554
No 44
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=7.9e-28 Score=212.85 Aligned_cols=163 Identities=21% Similarity=0.251 Sum_probs=148.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHH
Q 013339 23 LNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVK 102 (445)
Q Consensus 23 ~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~ 102 (445)
.++.+|||.||..|+.++++.|++.++.....+|..|+||||+|+..|+.+++++|++.+ ..++.+|..|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG-ARINVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHH
Confidence 468899999999999999999999866544558999999999999999999999999998 5678889999999999999
Q ss_pred cCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHH
Q 013339 103 NNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIV 182 (445)
Q Consensus 103 ~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~ 182 (445)
.|+.+++++|++. +..+|.+|.+|+||||+|+..++.+++++|+++|++++..|..|.||+++ +...++.+++
T Consensus 82 ~~~~~~v~~Ll~~---g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~----A~~~~~~~~~ 154 (179)
T 3f6q_A 82 HGHRDIVQKLLQY---KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDK----AKAPLRELLR 154 (179)
T ss_dssp TTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGG----SCHHHHHHHH
T ss_pred cCCHHHHHHHHHc---CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHH----HHHHHHHHHH
Confidence 9999999999998 77899999999999999999999999999999999999999999999999 6667888999
Q ss_pred HHHHHhcCccc
Q 013339 183 PALEEAGARRC 193 (445)
Q Consensus 183 ~~L~~~ga~~~ 193 (445)
++|++.|++..
T Consensus 155 ~~L~~~g~~~~ 165 (179)
T 3f6q_A 155 ERAEKMGQNLN 165 (179)
T ss_dssp HHHHHTTCCCS
T ss_pred HHHHHhhcCcc
Confidence 99999998764
No 45
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=3.9e-28 Score=240.43 Aligned_cols=176 Identities=24% Similarity=0.294 Sum_probs=83.2
Q ss_pred HHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCC--C
Q 013339 7 VKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNL--Q 84 (445)
Q Consensus 7 v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~--~ 84 (445)
++.|++.+.+++ ..|..|.||||+|+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|++.+. .
T Consensus 149 ~~~ll~~ga~vn-~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 226 (373)
T 2fo1_E 149 AKECIAAGADVN-AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI-YNKSERSALHQAAANRDFGMMVYMLNSTKLKG 226 (373)
T ss_dssp HHHHHHTCCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred HHHHHhcCCCCc-CCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc-cCCCCCCHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 344555554443 4455555555555555555555555555555543 45555555555555555555555555432 2
Q ss_pred ccccccccCcchHhHHHHcC---CHHHHHHHHHhcCcccccC--------CCCCCCCcHHHHHHhCCcHHHHHHHHhcC-
Q 013339 85 SAEMRTIHGETVLHLTVKNN---QYEAVKYLMETLNITKLAN--------MPDNDGNTILHLATAGKLTTMVIYLLKLG- 152 (445)
Q Consensus 85 ~~~~~~~~g~t~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~n--------~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g- 152 (445)
..+..|..|.||||+|+..+ +.+++++|++. +..++ .+|..|.||||+|+..++.+++++|++.+
T Consensus 227 ~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~---g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 303 (373)
T 2fo1_E 227 DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK---GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG 303 (373)
T ss_dssp TTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH---TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC
T ss_pred ChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC---CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcC
Confidence 33334444444444444444 44444444444 22222 13344444444444444444444444332
Q ss_pred CCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013339 153 VDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 153 ~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
++++..|..|.||||+ +...++.+++++|++.|++
T Consensus 304 ~~~n~~d~~g~TpL~~----A~~~g~~~iv~~Ll~~gad 338 (373)
T 2fo1_E 304 SNKDKQDEDGKTPIML----AAQEGRIEVVMYLIQQGAS 338 (373)
T ss_dssp CCTTCCCTTCCCHHHH----HHHHTCHHHHHHHHHTTCC
T ss_pred CCccCcCCCCCCHHHH----HHHcCCHHHHHHHHHcCCC
Confidence 4444444444444444 2223334444444444443
No 46
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=1.1e-27 Score=233.55 Aligned_cols=187 Identities=25% Similarity=0.286 Sum_probs=157.3
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCC----------------------------
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSS---------------------------- 53 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~---------------------------- 53 (445)
|+.|+|+.||+.+.+++...+..|+||||+||..|+.++|++||++|++++.
T Consensus 36 g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (337)
T 4g8k_A 36 EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKG 115 (337)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred CCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhcc
Confidence 6789999999999998855566799999999999999999999999876532
Q ss_pred ----CCCCCCccHHHHHHHcCCHHHHHHHHhcCCCc---------cccccccCcchHhHHHHcCCHHHHHHHHHhc----
Q 013339 54 ----LPDNEGRTPLHWAAIKGRINIIDEILSLNLQS---------AEMRTIHGETVLHLTVKNNQYEAVKYLMETL---- 116 (445)
Q Consensus 54 ----~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~---------~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~---- 116 (445)
..|..|.||||+|+..|+.++++.+++.+... ....+..|.||||+|+.+|+.+++++|+++.
T Consensus 116 ~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~ 195 (337)
T 4g8k_A 116 ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV 195 (337)
T ss_dssp CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT
T ss_pred chhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc
Confidence 25778999999999999999999999987432 1234557999999999999999999998631
Q ss_pred -------------------------------CcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHh-cCCCccccccCCCC
Q 013339 117 -------------------------------NITKLANMPDNDGNTILHLATAGKLTTMVIYLLK-LGVDVNAINRKGYT 164 (445)
Q Consensus 117 -------------------------------~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~-~g~~~~~~n~~G~T 164 (445)
..+.++|.+|.+|+||||+|+..++.++++.|++ .|++++.+|.+|+|
T Consensus 196 n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~T 275 (337)
T 4g8k_A 196 NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKT 275 (337)
T ss_dssp TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCB
T ss_pred CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCC
Confidence 0133567888999999999999999999999995 58999999999999
Q ss_pred HHHHHhhhccccchhcHHHHHHHhcCcc
Q 013339 165 ALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 165 pl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
|||+ |...++.+++++|+++|++.
T Consensus 276 pL~~----A~~~g~~~iv~~Ll~~GAd~ 299 (337)
T 4g8k_A 276 ALLL----AVELKLKKIAELLCKRGAST 299 (337)
T ss_dssp HHHH----HHHTTCHHHHHHHHTTSCSS
T ss_pred HHHH----HHHcCCHHHHHHHHHCCCCC
Confidence 9999 45567889999999999865
No 47
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.1e-27 Score=206.23 Aligned_cols=151 Identities=26% Similarity=0.294 Sum_probs=139.9
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcC
Q 013339 25 GHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNN 104 (445)
Q Consensus 25 G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g 104 (445)
+.||||.|+..|+.++++.|++.|++.. .|..|.||||+|+..|+.+++++|++.+ ...+.++..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAG-VSRDARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcC
Confidence 4689999999999999999999999875 5889999999999999999999999988 567788899999999999999
Q ss_pred CHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHH
Q 013339 105 QYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPA 184 (445)
Q Consensus 105 ~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~ 184 (445)
+.+++++|+++ +..++.+|.+|+||||+|+..++.+++++|+++|++++.+|..|.||+++ +...++.+++++
T Consensus 79 ~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~----A~~~~~~~i~~~ 151 (153)
T 1awc_B 79 HANIVEVLLKH---GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDI----SIDNGNEDLAEI 151 (153)
T ss_dssp CHHHHHHHHTT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----HHHTTCHHHHHH
T ss_pred hHHHHHHHHHc---CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH----HHHcCCHHHHHH
Confidence 99999999987 77899999999999999999999999999999999999999999999999 555677778877
Q ss_pred H
Q 013339 185 L 185 (445)
Q Consensus 185 L 185 (445)
|
T Consensus 152 L 152 (153)
T 1awc_B 152 L 152 (153)
T ss_dssp H
T ss_pred h
Confidence 6
No 48
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=1.6e-27 Score=240.56 Aligned_cols=181 Identities=30% Similarity=0.416 Sum_probs=129.2
Q ss_pred HHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC
Q 013339 3 VADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 82 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~ 82 (445)
+.|+++.|++.+.+.. ..+..|.||||+|+..|+.++++.|++.|++++. ++..|.||||+|+..|+.+++++|++.+
T Consensus 191 ~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 268 (437)
T 1n11_A 191 NLDIVKLLLPRGGSPH-SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA-ESVQGVTPLHLAAQEGHAEMVALLLSKQ 268 (437)
T ss_dssp CHHHHHHHGGGTCCSC-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHHhcC
Confidence 4555666665555443 4455566666666666666666666666666544 5666777777777777777777777665
Q ss_pred CCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCC
Q 013339 83 LQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKG 162 (445)
Q Consensus 83 ~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G 162 (445)
...+..+..|.||||+|+..|+.+++++|+++ +..+|.+|..|+||||+|+..++.+++++|+++|++++.+|..|
T Consensus 269 -~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g 344 (437)
T 1n11_A 269 -ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH---GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLG 344 (437)
T ss_dssp -CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH---TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTS
T ss_pred -CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC---CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCC
Confidence 34556667777777777777777777777776 66677888888888888888888888888888888888888888
Q ss_pred CCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 163 YTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 163 ~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
.||||+ +...++.+++++|+++|++..
T Consensus 345 ~t~L~~----A~~~g~~~iv~~Ll~~ga~~~ 371 (437)
T 1n11_A 345 YSPLHQ----AAQQGHTDIVTLLLKNGASPN 371 (437)
T ss_dssp CCHHHH----HHHTTCHHHHHHHHHTTCCSC
T ss_pred CCHHHH----HHHCChHHHHHHHHHCcCCCC
Confidence 888888 444567778888888887654
No 49
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1.9e-27 Score=218.87 Aligned_cols=161 Identities=20% Similarity=0.244 Sum_probs=142.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhc-CCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCcc----ccccccCcchHh
Q 013339 24 NGHTPLHLSCSKGHLEITRELLKL-DPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSA----EMRTIHGETVLH 98 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~-~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~----~~~~~~g~t~Lh 98 (445)
.|+||||+|+..|+.++++.|++. |.+++. +|.+|+||||+|+..|+.++++.|++.++... ..+|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQ-RGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 589999999999999999999998 888866 89999999999999999999999999986532 556778999999
Q ss_pred HHHHcCCHHHHHHHHHhcCcccccCCCCC-------------CCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCH
Q 013339 99 LTVKNNQYEAVKYLMETLNITKLANMPDN-------------DGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTA 165 (445)
Q Consensus 99 ~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~-------------~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tp 165 (445)
+|+.+|+.+++++|+++ +..++.++. +|+||||+|+..++.+++++|+++|++++.+|..|.||
T Consensus 81 ~A~~~~~~~~v~~Ll~~---g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~ 157 (232)
T 2rfa_A 81 IAVINQNVNLVRALLAR---GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTV 157 (232)
T ss_dssp HHHHTTCHHHHHHHHHT---TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHcCCHHHHHHHHhC---CCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 99999999999999998 555665544 89999999999999999999999999999999999999
Q ss_pred HHHHhhhccccchhcHH----HHHHHhcCcc
Q 013339 166 LDVVESDASNSGALQIV----PALEEAGARR 192 (445)
Q Consensus 166 l~~a~~~a~~~~~~~i~----~~L~~~ga~~ 192 (445)
||+|. ..++.+++ ++|++.|+..
T Consensus 158 L~~A~----~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 158 LHILI----LQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HHHHH----TCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHH----HcCChHHHHHHHHHHHhcCCch
Confidence 99954 44455544 9999999864
No 50
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=2.5e-28 Score=237.50 Aligned_cols=165 Identities=23% Similarity=0.286 Sum_probs=139.4
Q ss_pred HHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCC---HHHHHHHHh
Q 013339 4 ADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGR---INIIDEILS 80 (445)
Q Consensus 4 ~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~---~~iv~~Ll~ 80 (445)
.++++.|++.+.+++...|..|+||||+||..|+.++|++||++|++++. +|.+|+||||+|+..|+ .++++.|++
T Consensus 110 ~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~-~d~~g~TpLh~A~~~g~~~~~~~~~~ll~ 188 (327)
T 1sw6_A 110 QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLY-GDNMGESCLVKAVKSVNNYDSGTFEALLD 188 (327)
T ss_dssp HHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTB-CCTTCCCHHHHHHHSSHHHHTTCHHHHHH
T ss_pred HHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHhcccccHHHHHHHHH
Confidence 46777777777777744899999999999999999999999999999976 89999999999999999 788889998
Q ss_pred cCCCccccccccCcchHhHHHH----cCCHHHHHHHHHhcCc-----------------cc-------------------
Q 013339 81 LNLQSAEMRTIHGETVLHLTVK----NNQYEAVKYLMETLNI-----------------TK------------------- 120 (445)
Q Consensus 81 ~~~~~~~~~~~~g~t~Lh~A~~----~g~~~~v~~Ll~~~~~-----------------~~------------------- 120 (445)
.+....+.+|..|+||||+|+. .|+.+++++|++.... +.
T Consensus 189 ~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~ 268 (327)
T 1sw6_A 189 YLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDL 268 (327)
T ss_dssp HHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSH
T ss_pred hhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHH
Confidence 8867788999999999999999 8999999999876310 11
Q ss_pred ------ccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHH
Q 013339 121 ------LANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVV 169 (445)
Q Consensus 121 ------~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a 169 (445)
.+|.+|.+|+||||+|+..++.+++++|+++|++++.+|..|+||||+|
T Consensus 269 ~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 269 KWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323 (327)
T ss_dssp HHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred HHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 3677777888888888888888888888888888888888888888774
No 51
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=4.2e-27 Score=229.40 Aligned_cols=183 Identities=25% Similarity=0.292 Sum_probs=162.1
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.+.++.++...+...+..|..|+||||+||..|+.+++++|+++|++++. +|..|+||||+|+..|+.+++++|+++
T Consensus 35 g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 113 (351)
T 3utm_A 35 GNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHA-KDKGGLVPLHNACSYGHYEVTELLLKH 113 (351)
T ss_dssp TCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCcHHHHHHHCCCHHHHHHHHHC
Confidence 5678899999886665568899999999999999999999999999999976 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccC--------------------------------------
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLAN-------------------------------------- 123 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n-------------------------------------- 123 (445)
+ ..++..|..|.||||+|+.+|+.+++++|+++. ..++
T Consensus 114 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
T 3utm_A 114 G-ACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHG---ADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREA 189 (351)
T ss_dssp T-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred C-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhc
Confidence 8 567788899999999999999999999999973 3332
Q ss_pred ----------------CCCCCCCcHHHHHHhC---CcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHH
Q 013339 124 ----------------MPDNDGNTILHLATAG---KLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPA 184 (445)
Q Consensus 124 ----------------~~d~~g~T~LHlA~~~---~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~ 184 (445)
..+..|.||||+|+.. +..+++++|++.|++++..|..|.||||+ +...++.+++++
T Consensus 190 ~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~----A~~~g~~~~v~~ 265 (351)
T 3utm_A 190 DLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHV----AAERAHNDVMEV 265 (351)
T ss_dssp CHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHH----HHHTTCHHHHHH
T ss_pred cHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHH----HHHcCCHHHHHH
Confidence 2456788999999998 66899999999999999999999999999 555677899999
Q ss_pred HHHhcCccc
Q 013339 185 LEEAGARRC 193 (445)
Q Consensus 185 L~~~ga~~~ 193 (445)
|++.|++..
T Consensus 266 Ll~~ga~~n 274 (351)
T 3utm_A 266 LHKHGAKMN 274 (351)
T ss_dssp HHHTTCCTT
T ss_pred HHHCCCCCC
Confidence 999997643
No 52
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=4e-27 Score=237.61 Aligned_cols=179 Identities=26% Similarity=0.382 Sum_probs=165.3
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
++.++++.|++.+.+++ ..|..|.||||+|+..|+.+++++|++++++++. .|..|.||||+|+..|+.++++.|+++
T Consensus 223 ~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 300 (437)
T 1n11_A 223 NQVEVARSLLQYGGSAN-AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL-GNKSGLTPLHLVAQEGHVPVADVLIKH 300 (437)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 56899999999998866 7788999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+ ..++.++..|+||||+|+.+|+.+++++|+++ +.++|.+|..|+||||+|+..++.+++++|+++|++++.+|.+
T Consensus 301 g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~ 376 (437)
T 1n11_A 301 G-VMVDATTRMGYTPLHVASHYGNIKLVKFLLQH---QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSD 376 (437)
T ss_dssp T-CCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSS
T ss_pred C-ccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhc---CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCC
Confidence 8 56788899999999999999999999999998 7889999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhccccchhcHHHHHHHhcC
Q 013339 162 GYTALDVVESDASNSGALQIVPALEEAGA 190 (445)
Q Consensus 162 G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga 190 (445)
|.||+++| ...++.+++++|.....
T Consensus 377 g~t~l~~A----~~~g~~~~~~~l~~~~~ 401 (437)
T 1n11_A 377 GTTPLAIA----KRLGYISVTDVLKVVTD 401 (437)
T ss_dssp SCCHHHHH----HHTTCHHHHHHHHHHCC
T ss_pred CCCHHHHH----HHcCcHHHHHHHHhccc
Confidence 99999994 45567788888876653
No 53
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=4.5e-27 Score=216.63 Aligned_cols=168 Identities=25% Similarity=0.300 Sum_probs=149.0
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhH
Q 013339 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 99 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~ 99 (445)
..|..|.||||.|+..|+.++++.|++.|.+++. +|..|.||||+|+..|+.++++.|++.++......+..|.||||+
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~ 82 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQ-PDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW 82 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcCCCcCC-CCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence 5688999999999999999999999999999876 899999999999999999999999999977666777779999999
Q ss_pred HHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchh
Q 013339 100 TVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGAL 179 (445)
Q Consensus 100 A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~ 179 (445)
|+..|+.+++++|++. +..++.+|..|.||||.|+..++.+++++|++.|++++..|..|.||++++.... ...
T Consensus 83 A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~---~~~ 156 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMKY---GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRT---HSV 156 (240)
T ss_dssp HHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC---CSS
T ss_pred HHHcCCHHHHHHHHHc---CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC---ChH
Confidence 9999999999999987 7788899999999999999999999999999999999999999999999965322 224
Q ss_pred cHHHHHHHhcCcccC
Q 013339 180 QIVPALEEAGARRCD 194 (445)
Q Consensus 180 ~i~~~L~~~ga~~~~ 194 (445)
+++++|++.|++...
T Consensus 157 ~~~~~L~~~~~~~~~ 171 (240)
T 3eu9_A 157 DPTRLLLTFNVSVNL 171 (240)
T ss_dssp TTHHHHHHTTCCTTC
T ss_pred HHHHHHHhcCCCcch
Confidence 566666666665443
No 54
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=4.6e-27 Score=232.68 Aligned_cols=183 Identities=21% Similarity=0.284 Sum_probs=163.5
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcC---CCCCCCCCCCCccHHHHHHHcC---CHHHH
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLD---PDLSSLPDNEGRTPLHWAAIKG---RINII 75 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~---~~~~~~~d~~G~TpLh~Aa~~G---~~~iv 75 (445)
|+.++++.|++.+.+++ ..|..|.||||+|+..|+.+++++|++.+ .+++. .|..|.||||+|+..| +.+++
T Consensus 177 g~~~iv~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~d~~g~t~L~~A~~~~~~~~~~~v 254 (373)
T 2fo1_E 177 RRRRLVAYLMKAGADPT-IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE-LDRNGMTALMIVAHNEGRDQVASA 254 (373)
T ss_dssp TCHHHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC-CCTTSCCHHHHHHHSCSTTHHHHH
T ss_pred ChHHHHHHHHHCCCCCc-ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh-cCCCCCCHHHHHHHhCCcchHHHH
Confidence 57899999999998876 77889999999999999999999999987 67765 8999999999999998 89999
Q ss_pred HHHHhcCCCccc-------cccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHH
Q 013339 76 DEILSLNLQSAE-------MRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYL 148 (445)
Q Consensus 76 ~~Ll~~~~~~~~-------~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~L 148 (445)
+.|++.+..... ..|..|.||||+|+..|+.+++++|++.. +..+|.+|.+|+||||+|+..|+.+++++|
T Consensus 255 ~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~n~~d~~g~TpL~~A~~~g~~~iv~~L 332 (373)
T 2fo1_E 255 KLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK--GSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 332 (373)
T ss_dssp HHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS--CCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhc--CCCccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999854321 25678999999999999999999999873 367899999999999999999999999999
Q ss_pred HhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcc
Q 013339 149 LKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 149 l~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
+++|++++.+|..|.||+++ +...++.+++++|+++++++
T Consensus 333 l~~gad~~~~d~~g~t~l~~----A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 333 IQQGASVEAVDATDHTARQL----AQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp HHTTCCSSCCCSSSCCHHHH----HHHTTCHHHHHHHHTTC---
T ss_pred HHcCCCccCCCCCCCCHHHH----HHHcCCHHHHHHHHhcCccc
Confidence 99999999999999999999 55668899999999988764
No 55
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=1e-26 Score=222.33 Aligned_cols=183 Identities=20% Similarity=0.292 Sum_probs=156.3
Q ss_pred HHHHHHHHHHhchhhhc--------CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHH
Q 013339 3 VADIVKELLEARQEFAW--------KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINI 74 (445)
Q Consensus 3 ~~d~v~~Ll~~~~~~~~--------~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~i 74 (445)
..|.++.++....++.. ..+.+|.||||.||..|+.++|+.|++.|++++. .|.+|.||||+|+..|+.++
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~ 88 (299)
T 1s70_B 10 RNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINY-ANVDGLTALHQACIDDNVDM 88 (299)
T ss_dssp HHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTC-BCTTCCBHHHHHHHTTCHHH
T ss_pred HHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHH
Confidence 34566667766554332 2344678999999999999999999999999877 89999999999999999999
Q ss_pred HHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHH-hcCC
Q 013339 75 IDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL-KLGV 153 (445)
Q Consensus 75 v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll-~~g~ 153 (445)
+++|++.+ ..++.+|..|.||||+|+..|+.+++++|+++ +..++.+|.+|.||||+|+..++.++++.++ ..++
T Consensus 89 v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~---g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~ 164 (299)
T 1s70_B 89 VKFLVENG-ANINQPDNEGWIPLHAAASCGYLDIAEYLISQ---GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGV 164 (299)
T ss_dssp HHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC---CCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCC
Confidence 99999988 56788899999999999999999999999998 7788999999999999999999999998887 5566
Q ss_pred Cccc--------------------------cccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013339 154 DVNA--------------------------INRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 154 ~~~~--------------------------~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
+++. .+..|.||||+| ...++.+++++|++.|++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A----~~~g~~~~v~~Ll~~g~d~~~ 227 (299)
T 1s70_B 165 DIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVA----AAKGYTEVLKLLIQARYDVNI 227 (299)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHH----HHHTCHHHHHHHHTTTCCTTC
T ss_pred CchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHH----HHCCcHHHHHHHHHcCCCCCC
Confidence 6543 456899999994 456778899999999987653
No 56
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=1.1e-27 Score=221.44 Aligned_cols=168 Identities=29% Similarity=0.380 Sum_probs=146.0
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCC----CCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcc
Q 013339 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDP----DLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGET 95 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~----~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t 95 (445)
..|.+|+||||+|+..|+.++++.|++.+. +++. +|..|+||||+|+..|+.+++++|++.+ ..++.+|..|.|
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t 80 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNF-QNNLQQTPLHLAVITNQPEIAEALLGAG-CDPELRDFRGNT 80 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCC-CCTTCCCHHHHHHHTTCHHHHHCCCSCC-CCSCCCCTTCCC
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCC
Confidence 568899999999999999999999999876 4544 8999999999999999999999999988 567888999999
Q ss_pred hHhHHHHcCCHHHHHHHHHhcCc---ccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCcccccc-CCCCHHHHHhh
Q 013339 96 VLHLTVKNNQYEAVKYLMETLNI---TKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINR-KGYTALDVVES 171 (445)
Q Consensus 96 ~Lh~A~~~g~~~~v~~Ll~~~~~---~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~-~G~Tpl~~a~~ 171 (445)
|||+|+..|+.+++++|++.... ...++..|..|.||||+|+..++.+++++|+++|++++..+. .|.||||+
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~--- 157 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHL--- 157 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH---
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH---
Confidence 99999999999999999997432 234678899999999999999999999999999999999998 99999999
Q ss_pred hccccchhcHHHHHHHhcCccc
Q 013339 172 DASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 172 ~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
+...++.+++++|++.|++..
T Consensus 158 -A~~~~~~~~v~~Ll~~ga~~~ 178 (236)
T 1ikn_D 158 -AVDLQNPDLVSLLLKCGADVN 178 (236)
T ss_dssp -HHHTTCHHHHHHHHTTTCCSC
T ss_pred -HHHcCCHHHHHHHHHcCCCCC
Confidence 455678899999999998754
No 57
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=5.2e-27 Score=223.64 Aligned_cols=177 Identities=16% Similarity=0.168 Sum_probs=155.0
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
+..++.+.|.+. + .+..|..|.||||+|+..|+.++++.|+++|++++. + +|+||||+|+..|+.+++++|++.
T Consensus 11 ~~~~v~~lL~~~--~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~--~g~t~L~~A~~~g~~~~v~~Ll~~ 84 (285)
T 3kea_A 11 KSKQLKSFLSSK--D-TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL-L--ENEFPLHQAATLEDTKIVKILLFS 84 (285)
T ss_dssp CHHHHHHHHHST--T-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSC-C--TTCCHHHHHTTSSSCHHHHHHHHT
T ss_pred CHHHHHHHHHhC--C-CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-C--CCCCHHHHHHHcCCHHHHHHHHHC
Confidence 344555555554 3 348899999999999999999999999999999876 3 599999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCC-CcHHHHHHhCCcHHHHHHHHhcCCCcccccc
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDG-NTILHLATAGKLTTMVIYLLKLGVDVNAINR 160 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g-~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~ 160 (445)
+ ..++.+|..|.||||+|+..|+.+++++|+++ +..++.+|..| .||||+|+..++.+++++|+++|++.... .
T Consensus 85 g-a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~ 159 (285)
T 3kea_A 85 G-LDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK---NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-A 159 (285)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH---CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-S
T ss_pred C-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc---CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-c
Confidence 8 56778899999999999999999999999998 77899999999 89999999999999999999999887333 2
Q ss_pred CCCCHHHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 161 KGYTALDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 161 ~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
.|.||||+ +...++.+++++|++.|++..
T Consensus 160 ~g~t~L~~----A~~~g~~~~v~~Ll~~gad~n 188 (285)
T 3kea_A 160 ILLSCIHI----TIKNGHVDMMILLLDYMTSTN 188 (285)
T ss_dssp THHHHHHH----HHHTTCHHHHHHHHHHHHHTC
T ss_pred CCccHHHH----HHHcChHHHHHHHHHcCCCCC
Confidence 89999999 556678899999999998754
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=4.9e-26 Score=204.58 Aligned_cols=168 Identities=22% Similarity=0.228 Sum_probs=150.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhcCC-CCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHH
Q 013339 22 DLNGHTPLHLSCSKGHLEITRELLKLDP-DLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLT 100 (445)
Q Consensus 22 d~~G~TpLH~Aa~~g~~~iv~~LL~~~~-~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A 100 (445)
+..+.||||.|+..|+.+.++.|++.++ +++. .|.+|+||||+|+..|+.+++++|++.+ ..++.++..|.||||+|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A 79 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDE-VDTEGNTPLNIAVHNNDIEIAKALIDRG-ADINLQNSISDSPYLYA 79 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHH
Confidence 4578999999999999999999999887 6554 8999999999999999999999999998 56788899999999999
Q ss_pred HHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcC-CCccccccCCCCHHHHHhhhcc-ccch
Q 013339 101 VKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG-VDVNAINRKGYTALDVVESDAS-NSGA 178 (445)
Q Consensus 101 ~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g-~~~~~~n~~G~Tpl~~a~~~a~-~~~~ 178 (445)
+..|+.+++++|++.. +..++.+|..|.||||+|+..++.+++++|++.| ++++..|..|.||||++..... ..++
T Consensus 80 ~~~~~~~~~~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 157 (201)
T 3hra_A 80 GAQGRTEILAYMLKHA--TPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLY 157 (201)
T ss_dssp HHTTCHHHHHHHHHHS--CCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHH
T ss_pred HHcCCHHHHHHHHhcc--CcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhH
Confidence 9999999999999663 5578899999999999999999999999999998 9999999999999999765443 3334
Q ss_pred hcHHHHHHHhcCccc
Q 013339 179 LQIVPALEEAGARRC 193 (445)
Q Consensus 179 ~~i~~~L~~~ga~~~ 193 (445)
.+++++|++.|++..
T Consensus 158 ~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 158 QDIVKLLMENGADQS 172 (201)
T ss_dssp HHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHCCCCCC
Confidence 889999999998753
No 59
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=1.5e-26 Score=200.75 Aligned_cols=146 Identities=22% Similarity=0.294 Sum_probs=134.6
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++.+++++ ..|..|+||||+|+. |+.+++++|+++|++++. +|..|.||||+|+..|+.++++.|++.
T Consensus 16 g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 92 (162)
T 1ihb_A 16 GDLEQLTSLLQNNVNVN-AQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL-KDRTGFAVIHDAARAGFLDTLQTLLEF 92 (162)
T ss_dssp TCHHHHHHHTTSCCCTT-CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHhCCCCcc-ccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 57899999999988876 778999999999999 999999999999999976 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccc-cCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKL-ANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD 154 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~ 154 (445)
+ ..++.+|..|+||||+|+..|+.+++++|+++ +.. ++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 93 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 93 Q-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH---TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH---SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred C-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc---cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 8 56788899999999999999999999999998 444 688999999999999999999999999999975
No 60
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=4.2e-26 Score=199.84 Aligned_cols=145 Identities=30% Similarity=0.441 Sum_probs=135.6
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.|+++.|++.+.+++ ..|..|.||||+|+..|+.++++.|+++|++++. +|..|.||||+|+..|+.+++++|++.
T Consensus 25 g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 102 (169)
T 2y1l_E 25 GRDDEVRILMANGADVN-AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA-VDHAGMTPLRLAALFGHLEIVEVLLKN 102 (169)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 67899999999998876 7789999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 152 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g 152 (445)
+ ...+.+|..|+||||+|+..|+.+++++|+++ +..++.+|..|.||||+|+..++.+++++|++.|
T Consensus 103 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 103 G-ADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN---GADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred C-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 8 56778899999999999999999999999998 7788999999999999999999999999999875
No 61
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.3e-26 Score=199.91 Aligned_cols=153 Identities=24% Similarity=0.352 Sum_probs=138.9
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcC-CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHc
Q 013339 25 GHTPLHLSCSKGHLEITRELLKLD-PDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKN 103 (445)
Q Consensus 25 G~TpLH~Aa~~g~~~iv~~LL~~~-~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 103 (445)
|.||||.|+..|+.++++.|++.. .+++. .|..|+||||+ +..|+.++++.|++.+ ..++.+|..|.||||+|+.+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~-~~~~g~t~L~~-~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDA-LNRFGKTALQV-MMFGSTAIALELLKQG-ASPNVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTC-CCTTSCCHHHH-SCTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccc-cCCCCCcHHHH-HHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHc
Confidence 579999999999999999999983 25544 89999999999 9999999999999997 56788899999999999999
Q ss_pred CCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHH
Q 013339 104 NQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVP 183 (445)
Q Consensus 104 g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~ 183 (445)
|+.+++++|++. +..++.+|.+|+||||+|+..++.+++++|++. ++++..|..|.||+++ +...++.++++
T Consensus 79 ~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~----A~~~~~~~~v~ 150 (156)
T 1bd8_A 79 GFLDTLKVLVEH---GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLEL----ALQRGAQDLVD 150 (156)
T ss_dssp TCHHHHHHHHHT---TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHH----HHHSCCHHHHH
T ss_pred CcHHHHHHHHHc---CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHH----HHHcCcHHHHH
Confidence 999999999997 678999999999999999999999999999988 9999999999999999 55667888999
Q ss_pred HHHHh
Q 013339 184 ALEEA 188 (445)
Q Consensus 184 ~L~~~ 188 (445)
+|+++
T Consensus 151 ~Ll~~ 155 (156)
T 1bd8_A 151 ILQGH 155 (156)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 88753
No 62
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=1.3e-26 Score=205.06 Aligned_cols=156 Identities=22% Similarity=0.289 Sum_probs=145.8
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|+.++++.|++.++...+..|..|+||||+||..|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|++.
T Consensus 16 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 94 (179)
T 3f6q_A 16 GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV-MNRGDDTPLHLAASHGHRDIVQKLLQY 94 (179)
T ss_dssp TCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 5789999999998776678999999999999999999999999999999977 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
+ ..++.+|..|.||||+|+..|+.+++++|+++ +..++.+|.+|.||||+|+..++.+++++|++.|++++..+..
T Consensus 95 g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 95 K-ADINAVNEHGNVPLHYACFWGQDQVAEDLVAN---GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYK 170 (179)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCC
T ss_pred C-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCcc
Confidence 8 57788899999999999999999999999998 7789999999999999999999999999999999999877655
Q ss_pred C
Q 013339 162 G 162 (445)
Q Consensus 162 G 162 (445)
+
T Consensus 171 ~ 171 (179)
T 3f6q_A 171 D 171 (179)
T ss_dssp C
T ss_pred c
Confidence 4
No 63
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=1.6e-26 Score=227.70 Aligned_cols=165 Identities=21% Similarity=0.253 Sum_probs=111.1
Q ss_pred cCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHh
Q 013339 19 WKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLH 98 (445)
Q Consensus 19 ~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh 98 (445)
...|.+|.||||+||..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|++.+.. ..+.+|.||||
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~g~t~L~ 89 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTI-QNRFGCTALHLACKFGCVDTAKYLASVGEV---HSLWHGQKPIH 89 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHCCHHHHHHHHHHCCC---CCCBTTBCHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---ccccCCCCHHH
Confidence 46788899999999999999999999999999976 899999999999999999999999998852 22235566666
Q ss_pred HHHHcCCHHHHHHHHHhcCc-cccc-----------------CCCCCCCCcHHHHHHhCC--cHHHHHHHHhcCCCcccc
Q 013339 99 LTVKNNQYEAVKYLMETLNI-TKLA-----------------NMPDNDGNTILHLATAGK--LTTMVIYLLKLGVDVNAI 158 (445)
Q Consensus 99 ~A~~~g~~~~v~~Ll~~~~~-~~~~-----------------n~~d~~g~T~LHlA~~~~--~~~iv~~Ll~~g~~~~~~ 158 (445)
+|+..|+.+++++|++.... +..+ +.+|.+|.||||+|+..+ +.+++++|++.|++++..
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~ 169 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK 169 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc
Confidence 66666666666666554110 1111 124455555555555555 555555555555555555
Q ss_pred ccCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013339 159 NRKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 159 n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
|..|.|||++ +...++.+++++|++.|++
T Consensus 170 d~~g~t~L~~----A~~~g~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 170 DKADETPLMR----AMEFRNREALDLMMDTVPS 198 (364)
T ss_dssp CTTSCCHHHH----HHHTTCHHHHHHHHHHCSC
T ss_pred CCCCCCHHHH----HHHcCCHHHHHHHHhcccc
Confidence 5555555555 2333445555555555544
No 64
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=1.2e-26 Score=200.59 Aligned_cols=143 Identities=16% Similarity=0.164 Sum_probs=118.5
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcc-hHh
Q 013339 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGET-VLH 98 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t-~Lh 98 (445)
..+..|.||||+||..|+.++++.|+++|++++. +|..|+||||+|+ .|+.+++++|++.+ ..++.+|..|.| |||
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNA-PNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPVH 83 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC-CCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHHHH
Confidence 5678899999999999999999999999999877 8999999999986 99999999999998 677888999999 999
Q ss_pred HHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHH
Q 013339 99 LTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDV 168 (445)
Q Consensus 99 ~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~ 168 (445)
+|+..|+.+++++|+++ +..++.+|.+|+||||+|+..++.+++++|+++|++++..|..|.||.+-
T Consensus 84 ~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRA---GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHHHHTCHHHHHHHHHH---TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHCCCHHHHHHHHHc---CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence 99999999999999998 78899999999999999999999999999999999999999999999775
No 65
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=1e-25 Score=219.43 Aligned_cols=180 Identities=26% Similarity=0.285 Sum_probs=155.3
Q ss_pred CHHHHHHHHHHhchhhhc---------CCCCCCChHHHHHHHcCCHHHHHHHhh-cCCCCCCCCCCCCccHHHHHHHcCC
Q 013339 2 HVADIVKELLEARQEFAW---------KKDLNGHTPLHLSCSKGHLEITRELLK-LDPDLSSLPDNEGRTPLHWAAIKGR 71 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~---------~~d~~G~TpLH~Aa~~g~~~iv~~LL~-~~~~~~~~~d~~G~TpLh~Aa~~G~ 71 (445)
+..++++.+++.+.+++. ..+..|.||||+||..|+.++|++||+ .|++++. +|..|.||||.++..++
T Consensus 136 ~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~-~d~~g~t~l~~~~~~~~ 214 (337)
T 4g8k_A 136 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA-CDNMGRNALIHALLSSD 214 (337)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTC-CCTTSCCHHHHHHHHSC
T ss_pred CcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCc-cCCCCCcHHHHHHHHcC
Confidence 567999999998876542 346679999999999999999999996 5888876 89999999999887655
Q ss_pred ----HHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHH
Q 013339 72 ----INIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIY 147 (445)
Q Consensus 72 ----~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~ 147 (445)
.++++.|++++ ..++.+|.+|+||||+|+..|+.++++.|++.. +..+|.+|.+|+||||+|+..|+.+++++
T Consensus 215 ~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~--~~~vn~~d~~G~TpL~~A~~~g~~~iv~~ 291 (337)
T 4g8k_A 215 DSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE--HIEINDTDSDGKTALLLAVELKLKKIAEL 291 (337)
T ss_dssp TTTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTST--TCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred cccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc--CCcccCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 35788899988 677889999999999999999999999999752 56799999999999999999999999999
Q ss_pred HHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013339 148 LLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 148 Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
|+++|+++|. .+||++ +...++.+++++|+++|+++..
T Consensus 292 Ll~~GAd~n~-----~~~L~~----A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 292 LCKRGASTDC-----GDLVMT----ARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp HHTTSCSSTT-----CCHHHH----HHHTTCHHHHHHHHHTTCCC--
T ss_pred HHHCCCCCCC-----CCHHHH----HHHcCCHHHHHHHHHCcCCCCC
Confidence 9999999875 469999 4556788999999999998754
No 66
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=2.1e-26 Score=213.63 Aligned_cols=163 Identities=21% Similarity=0.197 Sum_probs=119.2
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHH
Q 013339 23 LNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVK 102 (445)
Q Consensus 23 ~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~ 102 (445)
..|.||||.|+..|+.+.++.|+++|++++. +..|.||||.|+..|+.++++.|++.+. .++.+|..|+||||+|+.
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEVD-DPSLPNDEGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS-SCCCCCTTSCCHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHH
Confidence 4699999999999999999999999999864 5789999999999999999999999985 788889999999999999
Q ss_pred cCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCC-CHHHHHhhhccccchhcH
Q 013339 103 NNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGY-TALDVVESDASNSGALQI 181 (445)
Q Consensus 103 ~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~-Tpl~~a~~~a~~~~~~~i 181 (445)
+|+.+++++|+++ +.++|.+|.+|+||||+|+..++.+++++|+++|++++..|..|. ||++++. +...++.++
T Consensus 80 ~g~~~~v~~Ll~~---ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~--~~~~g~~~~ 154 (239)
T 1ycs_B 80 AGHTEIVKFLVQF---GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCE--EMEEGYTQC 154 (239)
T ss_dssp HTCHHHHHHHHHH---TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCC--SSSTTCCCH
T ss_pred cCCHHHHHHHHHc---CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHH--HhhhccHHH
Confidence 9999999999998 788999999999999999999999999999999999999998887 9999841 256678999
Q ss_pred HHHHHHhcCccc
Q 013339 182 VPALEEAGARRC 193 (445)
Q Consensus 182 ~~~L~~~ga~~~ 193 (445)
+++|++.|++..
T Consensus 155 ~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 155 SQFLYGVQEKMG 166 (239)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHhhhccc
Confidence 999999988754
No 67
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=1.5e-25 Score=192.84 Aligned_cols=140 Identities=25% Similarity=0.353 Sum_probs=131.1
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..++++.|++.++++. .|..|.||||+|+..|+.++++.|++.|++++. +|..|+||||+|+..|+.+++++|+++
T Consensus 13 g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 89 (153)
T 1awc_B 13 GQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTPLHMAASEGHANIVEVLLKH 89 (153)
T ss_dssp TCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcChHHHHHHHHHc
Confidence 57899999999988764 588999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHH
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYL 148 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~L 148 (445)
+ ..++.+|..|+||||+|+.+|+.+++++|+++ +..++.+|.+|.||||+|+..++.+++++|
T Consensus 90 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 90 G-ADVNAKDMLKMTALHWATEHNHQEVVELLIKY---GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred C-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 7 56788899999999999999999999999998 778999999999999999999999999887
No 68
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=1.2e-25 Score=196.31 Aligned_cols=148 Identities=20% Similarity=0.236 Sum_probs=137.5
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..++++.|++.+.+++ ..|..|.||||+|+..|+.++++.|+++|++++. .|..|.||||+|+..|+.+++++|++.
T Consensus 14 g~~~~v~~ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 91 (167)
T 3v31_A 14 GEMLYLATRIEQENVIN-HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESALSLACSKGYTDIVKMLLDC 91 (167)
T ss_dssp TCHHHHHHHHHHSSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCcC-CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHHHC
Confidence 57899999999987765 7899999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCc
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDV 155 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~ 155 (445)
+ ..++.+|..|.||||+|+..|+.+++++|+++ +..++.+|.+|.||||+|+..++.+++++|++++.++
T Consensus 92 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 92 G-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES---GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred C-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 8 56778899999999999999999999999997 7788999999999999999999999999999876554
No 69
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=3.2e-26 Score=214.19 Aligned_cols=165 Identities=24% Similarity=0.293 Sum_probs=142.5
Q ss_pred CCChHHHHHHHcCCHH----HHHHHhhcCCCCCC---CCCCCCccHHHHHHHc---CCHHHHHHHHhcCCCccc------
Q 013339 24 NGHTPLHLSCSKGHLE----ITRELLKLDPDLSS---LPDNEGRTPLHWAAIK---GRINIIDEILSLNLQSAE------ 87 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~----iv~~LL~~~~~~~~---~~d~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~~~~------ 87 (445)
.|+||||+||..|+.+ ++++|++.|.+++. .+|.+|+||||+|+.. |+.+++++|++.+.....
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 4899999999999997 56777778999875 4799999999999999 999999999998743221
Q ss_pred ----cccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCC-------------CCcHHHHHHhCCcHHHHHHHHh
Q 013339 88 ----MRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDND-------------GNTILHLATAGKLTTMVIYLLK 150 (445)
Q Consensus 88 ----~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~-------------g~T~LHlA~~~~~~~iv~~Ll~ 150 (445)
..|..|.||||+|+..|+.+++++|+++ +..+|.+|.. |.||||+|+..++.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVEN---GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHc---CCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 2346799999999999999999999998 6778888876 9999999999999999999999
Q ss_pred ---cCCCccccccCCCCHHHHHhhhccccchhc-------HHHHHHHhcCccc
Q 013339 151 ---LGVDVNAINRKGYTALDVVESDASNSGALQ-------IVPALEEAGARRC 193 (445)
Q Consensus 151 ---~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~-------i~~~L~~~ga~~~ 193 (445)
.|++++.+|..|+||||+|.... .++.+ ++++|++.|++..
T Consensus 158 ~~~~ga~~n~~d~~g~TpLh~A~~~~--~~~~~~~~~~~~iv~~Ll~~ga~~~ 208 (256)
T 2etb_A 158 NPHQPASLEATDSLGNTVLHALVMIA--DNSPENSALVIHMYDGLLQMGARLC 208 (256)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccCCCcCccCCCCCCHHHHHHHcc--cCCchhhHHHHHHHHHHHHcCCCcc
Confidence 99999999999999999975422 34444 9999999998763
No 70
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=7.4e-26 Score=197.17 Aligned_cols=146 Identities=22% Similarity=0.268 Sum_probs=134.0
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..++++.|++..+......|..|+||||+|+..|+.+++++|+++|++++. +|.+|+||||+|+..|+.+++++|++.
T Consensus 19 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 97 (165)
T 3twr_A 19 GDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA-KDKGGLVPLHNACSYGHYEVAELLVKH 97 (165)
T ss_dssp TCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc-cCCCCCCHHHHHHHcCcHHHHHHHHhC
Confidence 5689999999987776678889999999999999999999999999999976 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGV 153 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~ 153 (445)
+ ...+.+|..|+||||+|+.+|+.+++++|+++ +..++.+|.+|.||||+|+. ++.+++++|+++|+
T Consensus 98 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 98 G-AVVNVADLWKFTPLHEAAAKGKYEICKLLLQH---GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp T-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred C-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 8 56788899999999999999999999999998 77899999999999999776 88999999998875
No 71
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=1.6e-25 Score=200.08 Aligned_cols=145 Identities=24% Similarity=0.317 Sum_probs=135.3
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..++++.|++.+.+++ ..|..|+||||+|+..|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|++.
T Consensus 46 g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (192)
T 2rfm_A 46 GMENAIDKLVENFDKLE-DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT-KDFSGKTPLMWSIIFGYSEMSYFLLEH 123 (192)
T ss_dssp TCGGGHHHHHHHHCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHhccccc-cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHC
Confidence 56789999999988766 7788999999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcC
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 152 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g 152 (445)
+ ..++.+|..|.||||+|+..|+.+++++|+++ +..++.+|.+|.||||+|+..++.+++++|++.|
T Consensus 124 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 124 G-ANVNDRNLEGETPLIVASKYGRSEIVKKLLEL---GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp T-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred C-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 8 56788899999999999999999999999998 7789999999999999999999999999999654
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=1.8e-25 Score=211.19 Aligned_cols=160 Identities=19% Similarity=0.266 Sum_probs=132.0
Q ss_pred CHHHHHHHHHHhchhh-------h---cCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCC--------------
Q 013339 2 HVADIVKELLEARQEF-------A---WKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDN-------------- 57 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~-------~---~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~-------------- 57 (445)
++.|+++.|++.+.+. + ...|..|+||||+|+..|+.++|++|+++|++++. ++.
T Consensus 68 g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~ 146 (273)
T 2pnn_A 68 GQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA-AANGDFFKKTKGRPGFY 146 (273)
T ss_dssp TBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBCSGGGSSCSSSCCCC
T ss_pred CChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc-ccccccccccccccccc
Confidence 6789999999998653 2 12567899999999999999999999999999976 565
Q ss_pred CCccHHHHHHHcCCHHHHHHHHh---cCCCccccccccCcchHhHHHHcCC---------HHHHHHHHHhcCcccccC--
Q 013339 58 EGRTPLHWAAIKGRINIIDEILS---LNLQSAEMRTIHGETVLHLTVKNNQ---------YEAVKYLMETLNITKLAN-- 123 (445)
Q Consensus 58 ~G~TpLh~Aa~~G~~~iv~~Ll~---~~~~~~~~~~~~g~t~Lh~A~~~g~---------~~~v~~Ll~~~~~~~~~n-- 123 (445)
.|.||||+|+..|+.+++++|++ .+ ..++.+|.+|+||||+|+..|+ .+++++|++. +..+|
T Consensus 147 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~---ga~~n~~ 222 (273)
T 2pnn_A 147 FGELPLSLAACTNQLAIVKFLLQNSWQP-ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL---GAKLHPT 222 (273)
T ss_dssp SCBSHHHHHHHTTCHHHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH---HHHHCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccCC-CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh---hhhcccc
Confidence 79999999999999999999999 55 6788899999999999999998 7999999988 56665
Q ss_pred -----CCCCCCCcHHHHHHhCCcHHHHHHHHhcCC-CccccccCCCCHH
Q 013339 124 -----MPDNDGNTILHLATAGKLTTMVIYLLKLGV-DVNAINRKGYTAL 166 (445)
Q Consensus 124 -----~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~-~~~~~n~~G~Tpl 166 (445)
.+|.+|+||||+|+..++.+++++|+++|+ ++......+.+|-
T Consensus 223 ~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 223 LKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred cccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 589999999999999999999999999999 7877777666654
No 73
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=7.8e-26 Score=190.82 Aligned_cols=130 Identities=16% Similarity=0.190 Sum_probs=118.4
Q ss_pred cCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccc-CcchH
Q 013339 19 WKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIH-GETVL 97 (445)
Q Consensus 19 ~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~-g~t~L 97 (445)
+..|..|.||||+|+..|+.++++.|+++|++++. +|..|+||||+|+. |+.+++++|++.+ ..++.+|.. |+|||
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNA-LNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPATLTRPV 82 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTTTTBCHH
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCC-cCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCCCCCCHH
Confidence 36788999999999999999999999999999876 78999999999999 9999999999988 567778888 99999
Q ss_pred hHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCC
Q 013339 98 HLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD 154 (445)
Q Consensus 98 h~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~ 154 (445)
|+|+..|+.+++++|++. +..++.+|.+|.||||+|+..++.+++++|+++|+|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRA---GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHT---CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHc---CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999987 678899999999999999999999999999988875
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=5e-25 Score=189.93 Aligned_cols=143 Identities=23% Similarity=0.242 Sum_probs=131.1
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..++++.|++..+...+..|..|+||||+ |..|+.++++.|+++|++++. +|..|.||||+|+..|+.++++.|++.
T Consensus 13 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 90 (156)
T 1bd8_A 13 GDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV-QDTSGTSPVHDAARTGFLDTLKVLVEH 90 (156)
T ss_dssp TCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 578999999999433445789999999999 999999999999999999976 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhc
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKL 151 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~ 151 (445)
+ ..++.+|..|+||||+|+.+|+.+++++|++. ..++.+|.+|.||||+|+..++.+++++|+++
T Consensus 91 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 91 G-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE----SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp T-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT----SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred C-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc----cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 8 67788899999999999999999999999986 46888999999999999999999999999864
No 75
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=4.6e-26 Score=210.07 Aligned_cols=157 Identities=22% Similarity=0.218 Sum_probs=136.8
Q ss_pred HHHHHHhchhhh--cCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC
Q 013339 7 VKELLEARQEFA--WKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQ 84 (445)
Q Consensus 7 v~~Ll~~~~~~~--~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~ 84 (445)
++.|++.+.+.. ...+.+|.||||+||..|+.++++.|++.|++++. +|..|+||||+|+..|+.+++++|++.+ .
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a 78 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQ-PNEEGITALHNAICGANYSIVDFLITAG-A 78 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-C
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCC-C
Confidence 467788776644 46677889999999999999999999999999976 8999999999999999999999999998 5
Q ss_pred ccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCC-CCCCcHHHHH--HhCCcHHHHHHHHhcCCCccccccC
Q 013339 85 SAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPD-NDGNTILHLA--TAGKLTTMVIYLLKLGVDVNAINRK 161 (445)
Q Consensus 85 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d-~~g~T~LHlA--~~~~~~~iv~~Ll~~g~~~~~~n~~ 161 (445)
.++.+|..|+||||+|+..|+.+++++|++. +..++.+| .+|.||||+| +..++.+++++|++.|++++..|..
T Consensus 79 ~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~---ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~ 155 (229)
T 2vge_A 79 NVNSPDSHGWTPLHCAASCNDTVICMALVQH---GAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSG 155 (229)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT---TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGG
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCC
Confidence 7788899999999999999999999999987 77888886 6999999999 9999999999999999999999999
Q ss_pred CCCHHHH
Q 013339 162 GYTALDV 168 (445)
Q Consensus 162 G~Tpl~~ 168 (445)
|.||++.
T Consensus 156 ~~~~l~~ 162 (229)
T 2vge_A 156 AVYALWD 162 (229)
T ss_dssp EEEESSC
T ss_pred chHHHHH
Confidence 9999875
No 76
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=3e-24 Score=177.51 Aligned_cols=126 Identities=38% Similarity=0.612 Sum_probs=118.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHc
Q 013339 24 NGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKN 103 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 103 (445)
+|+||||+|+..|+.++++.|++++++++. .|..|.||||+|+..|+.+++++|++.+ ...+.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHc
Confidence 589999999999999999999999999876 7999999999999999999999999987 56778888999999999999
Q ss_pred CCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCC
Q 013339 104 NQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD 154 (445)
Q Consensus 104 g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~ 154 (445)
|+.+++++|+++ +..++.+|.+|+||||+|+..++.+++++|+++|++
T Consensus 79 ~~~~~~~~Ll~~---g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 79 GHLEVVKLLLEA---GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred ChHHHHHHHHHc---CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999997 777899999999999999999999999999999875
No 77
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=2.2e-24 Score=181.83 Aligned_cols=128 Identities=22% Similarity=0.254 Sum_probs=117.0
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhH
Q 013339 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 99 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~ 99 (445)
.....|.||||+||..|+.++++.|+++|++++. +|..|+||||+|+..|+.++++.|++.+ ..++..|..|.||||+
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADVNA-KDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHL 86 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHH
Confidence 4456789999999999999999999999999876 8999999999999999999999999997 5677888999999999
Q ss_pred HHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcC
Q 013339 100 TVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 152 (445)
Q Consensus 100 A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g 152 (445)
|+..|+.+++++|+++ +..++.+|.+|+||||+|+..++.+++++|++.|
T Consensus 87 A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKH---GADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHHc---CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999998 7788999999999999999999999999999875
No 78
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=4e-25 Score=207.09 Aligned_cols=169 Identities=21% Similarity=0.203 Sum_probs=142.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhh----cCCCCCCC---CCCCCccHHHHHH---HcCCHHHHHHHHhcCCC-------
Q 013339 22 DLNGHTPLHLSCSKGHLEITRELLK----LDPDLSSL---PDNEGRTPLHWAA---IKGRINIIDEILSLNLQ------- 84 (445)
Q Consensus 22 d~~G~TpLH~Aa~~g~~~iv~~LL~----~~~~~~~~---~d~~G~TpLh~Aa---~~G~~~iv~~Ll~~~~~------- 84 (445)
+..|+||||.||+.|+.+.++.|++ .+++++.. .|..|+||||+|+ ..|+.++++.|++.+..
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 5679999999999999996555555 88888642 2477999999999 67999999999998642
Q ss_pred ---ccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCC--------------CCCCcHHHHHHhCCcHHHHHH
Q 013339 85 ---SAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPD--------------NDGNTILHLATAGKLTTMVIY 147 (445)
Q Consensus 85 ---~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d--------------~~g~T~LHlA~~~~~~~iv~~ 147 (445)
.....|..|+||||+|+..|+.+++++|++. +..+|.+| ..|.||||+|+..++.+++++
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 158 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEK---GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHY 158 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhC---CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 2344556899999999999999999999997 77788888 689999999999999999999
Q ss_pred HHh---cCCCccccccCCCCHHHHHhhhccccc-----hhcHHHHHHHhcCccc
Q 013339 148 LLK---LGVDVNAINRKGYTALDVVESDASNSG-----ALQIVPALEEAGARRC 193 (445)
Q Consensus 148 Ll~---~g~~~~~~n~~G~Tpl~~a~~~a~~~~-----~~~i~~~L~~~ga~~~ 193 (445)
|++ .|++++.+|..|+||||+|........ ..+++++|++.|++..
T Consensus 159 Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 159 LTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 999 999999999999999999765433211 1579999999998763
No 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=2.3e-26 Score=212.11 Aligned_cols=169 Identities=18% Similarity=0.169 Sum_probs=147.2
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
|..|+++.|++.+.+++ ..|..|+||||+||..|+.+++++|++.|++++. +|..|+||||+|+..|+.+++++|++.
T Consensus 32 g~~~~v~~Ll~~g~~~~-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 109 (229)
T 2vge_A 32 GELEVVQQAVKEMNDPS-QPNEEGITALHNAICGANYSIVDFLITAGANVNS-PDSHGWTPLHCAASCNDTVICMALVQH 109 (229)
T ss_dssp TCHHHHHHHHHHSSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 57899999999998876 7899999999999999999999999999999977 899999999999999999999999999
Q ss_pred CCCccccc-cccCcchHhHH--HHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCC--cc
Q 013339 82 NLQSAEMR-TIHGETVLHLT--VKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD--VN 156 (445)
Q Consensus 82 ~~~~~~~~-~~~g~t~Lh~A--~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~--~~ 156 (445)
+. .++.. +.+|+||||+| +..|+.+++++|++. +..++.+|..|.|++|.++.... .++|++.|++ ++
T Consensus 110 ga-~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~---ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~ 182 (229)
T 2vge_A 110 GA-AIFATTLSDGATAFEKCDPYREGYADCATYLADV---EQSMGLMNSGAVYALWDYSAEFG---DELSFREGESVTVL 182 (229)
T ss_dssp TC-CTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH---HHHTTTSGGGEEEESSCBCCSST---TBCCBCTTCEEEEE
T ss_pred CC-CcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc---CCCcccccCCchHHHHHHhhccc---cccCcccccccccc
Confidence 85 44555 46999999999 999999999999998 77899999999999997655443 3567788988 77
Q ss_pred ccccCCCCHHHHHhhhccccchhcHHH
Q 013339 157 AINRKGYTALDVVESDASNSGALQIVP 183 (445)
Q Consensus 157 ~~n~~G~Tpl~~a~~~a~~~~~~~i~~ 183 (445)
.+|..|.|||++ |...++.++++
T Consensus 183 ~~d~~G~TpL~~----A~~~g~~~~v~ 205 (229)
T 2vge_A 183 RRDGPEETDWWW----AALHGQEGYVP 205 (229)
T ss_dssp ESSCTTCSSEEE----EEETTEEEEEE
T ss_pred ccCCCcccHHHH----HHHcCCcceee
Confidence 889999999999 55556655553
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=6.1e-25 Score=203.74 Aligned_cols=153 Identities=18% Similarity=0.188 Sum_probs=123.0
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 81 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~ 81 (445)
+..+.++.|++.+.++. .+..|.||||+|+..|+.++++.|++.|++++. +|..|+||||+|+..|+.+++++|+++
T Consensus 16 ~~~~~~~~ll~~g~~~~--~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 92 (239)
T 1ycs_B 16 NLRKTGSERIAHGMRVK--FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL-PNDEGITALHNAVCAGHTEIVKFLVQF 92 (239)
T ss_dssp -----------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCC-CCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred hhHHHHHHHhccCCCcc--cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 56788999999998876 346799999999999999999999999999876 899999999999999999999999999
Q ss_pred CCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCC-cHHHHH--HhCCcHHHHHHHHhcCCCcccc
Q 013339 82 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGN-TILHLA--TAGKLTTMVIYLLKLGVDVNAI 158 (445)
Q Consensus 82 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~-T~LHlA--~~~~~~~iv~~Ll~~g~~~~~~ 158 (445)
+ ..++.+|..|+||||+|+.+|+.+++++|+++ +..++.+|..|. ||||+| +..++.+++++|++.|++++..
T Consensus 93 g-a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 93 G-VNVNAADSDGWTPLHCAASCNNVQVCKFLVES---GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIM 168 (239)
T ss_dssp T-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTT
T ss_pred C-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccc
Confidence 7 56788999999999999999999999999998 788899998887 999999 7889999999999999998877
Q ss_pred ccC
Q 013339 159 NRK 161 (445)
Q Consensus 159 n~~ 161 (445)
|..
T Consensus 169 ~~~ 171 (239)
T 1ycs_B 169 NKG 171 (239)
T ss_dssp GGG
T ss_pred ccc
Confidence 544
No 81
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=1.6e-24 Score=210.58 Aligned_cols=185 Identities=21% Similarity=0.258 Sum_probs=149.5
Q ss_pred CHHHHHHHHHHhchhhhcC----------------CCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHH
Q 013339 2 HVADIVKELLEARQEFAWK----------------KDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHW 65 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~----------------~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~ 65 (445)
|+.++++.|++++.+.... ......+.+|+|+..+..++++.|++.|.+++..+|.+|+||||+
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~ 137 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW 137 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHH
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHH
Confidence 4689999999998553320 111223346899999999999999999999977579999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCC---HHHHHHHHHhcCcccccCCCCCCCCcHHHHHHh----
Q 013339 66 AAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQ---YEAVKYLMETLNITKLANMPDNDGNTILHLATA---- 138 (445)
Q Consensus 66 Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~---~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~---- 138 (445)
||..|+.+++++|++++ ..++.+|.+|+||||+|+.+|+ .++++.|++.. ...++.+|.+|+||||+|+.
T Consensus 138 Aa~~g~~~~v~~Ll~~G-ad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~--~~~~~~~d~~g~tpLh~A~~~~~~ 214 (327)
T 1sw6_A 138 LTSIANLELVKHLVKHG-SNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL--YPCLILEDSMNRTILHHIIITSGM 214 (327)
T ss_dssp HHHTTCHHHHHHHHHTT-CCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHH--GGGGGEECTTCCCHHHHHHHHHTS
T ss_pred HHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhh--hccccCCCCCCCCHHHHHHHHccc
Confidence 99999999999999998 6778899999999999999998 67778887763 24688999999999999999
Q ss_pred CCcHHHHHHHHhcCC---------------------------------------------CccccccCCCCHHHHHhhhc
Q 013339 139 GKLTTMVIYLLKLGV---------------------------------------------DVNAINRKGYTALDVVESDA 173 (445)
Q Consensus 139 ~~~~~iv~~Ll~~g~---------------------------------------------~~~~~n~~G~Tpl~~a~~~a 173 (445)
.++.+++++|++.+. +++.+|..|+||||+ +
T Consensus 215 ~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~----A 290 (327)
T 1sw6_A 215 TGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNI----A 290 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHH----H
T ss_pred cccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHH----H
Confidence 899999999987632 577888899999999 4
Q ss_pred cccchhcHHHHHHHhcCccc
Q 013339 174 SNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 174 ~~~~~~~i~~~L~~~ga~~~ 193 (445)
...++.+++++|+++|++..
T Consensus 291 ~~~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 291 ARLGNISIVDALLDYGADPF 310 (327)
T ss_dssp HHHCCHHHHHHHHHTTCCTT
T ss_pred HHcCCHHHHHHHHHcCCCCc
Confidence 55678899999999998754
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=5.3e-24 Score=179.53 Aligned_cols=133 Identities=15% Similarity=0.221 Sum_probs=122.6
Q ss_pred CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCC
Q 013339 49 PDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDND 128 (445)
Q Consensus 49 ~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~ 128 (445)
++++. +|..|.||||+|+..|+.+++++|++.+ ..++.+|..|+||||+|+. |+.+++++|+++ +..++.+|..
T Consensus 3 ~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~---g~~~~~~~~~ 76 (136)
T 1d9s_A 3 PGIHM-LGGSSDAGLATAAARGQVETVRQLLEAG-ADPNALNRFGRRPIQVMMM-GSAQVAELLLLH---GAEPNCADPA 76 (136)
T ss_dssp CCCSC-CCCCCSCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHH---TCCSSCCBTT
T ss_pred CCccC-CCCCCccHHHHHHHcCCHHHHHHHHHcC-CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHC---CCCCCCcCCC
Confidence 45544 8999999999999999999999999997 5678889999999999999 999999999998 7789999999
Q ss_pred -CCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013339 129 -GNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 129 -g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
|+||||+|+..++.+++++|++.|++++..|..|.||+++| ...++.+++++|+++|++
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A----~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLA----EEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHH----HHHTCHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH----HHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999994 456778999999999874
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=7.7e-25 Score=195.20 Aligned_cols=155 Identities=12% Similarity=0.040 Sum_probs=133.8
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCCCCCCC-CCCccHHHHHHHcCCH----HHHHHHHhcCCCccccccccCcchHhH
Q 013339 25 GHTPLHLSCSKGHLEITRELLKLDPDLSSLPD-NEGRTPLHWAAIKGRI----NIIDEILSLNLQSAEMRTIHGETVLHL 99 (445)
Q Consensus 25 G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d-~~G~TpLh~Aa~~G~~----~iv~~Ll~~~~~~~~~~~~~g~t~Lh~ 99 (445)
+.++||.||+.|+.+.++.+++.+.+. .+ ..|+||||+|+..|+. +++++|+++| .+++.+|..|+||||+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~---~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G-advn~~d~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED---KESVLKSNILYDVLRNNNDEARYKISMFLINKG-ADIKSRTKEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC---HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT-CCSSCCCTTCCCTHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc---ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCC-CCCCCCCCCCCcHHHH
Confidence 568899999999999999999887543 34 7799999999999975 5899999988 6788889999999999
Q ss_pred HHHcCC------HHHHHHHHHhcCcccccCCCCCCCC-cHHHHHHhCC-----cHHHHHHHHh-cCCCccccccCCCCHH
Q 013339 100 TVKNNQ------YEAVKYLMETLNITKLANMPDNDGN-TILHLATAGK-----LTTMVIYLLK-LGVDVNAINRKGYTAL 166 (445)
Q Consensus 100 A~~~g~------~~~v~~Ll~~~~~~~~~n~~d~~g~-T~LHlA~~~~-----~~~iv~~Ll~-~g~~~~~~n~~G~Tpl 166 (445)
|+..|+ .+++++|+++ ++++|.+|.+|+ ||||+|+..+ +.+++++|++ +|++++.+|..|.|||
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~---Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL 158 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEK---GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTAL 158 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHT---TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred HHHcCCcchhhHHHHHHHHHHC---CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHH
Confidence 999887 5789999988 888999999999 9999999854 4568999998 9999999999999999
Q ss_pred HHHhhhccccchhcHHHHHHHhcC
Q 013339 167 DVVESDASNSGALQIVPALEEAGA 190 (445)
Q Consensus 167 ~~a~~~a~~~~~~~i~~~L~~~ga 190 (445)
|+ +...++.+++++|.+...
T Consensus 159 ~~----A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 159 EF----VKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp HH----HHTTTCHHHHHHHHHHHH
T ss_pred HH----HHHcCCHHHHHHHHHHHH
Confidence 99 556677788888887654
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=2.9e-24 Score=191.44 Aligned_cols=151 Identities=14% Similarity=0.017 Sum_probs=129.8
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHHHcCCH----HHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCC------
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHL----EITRELLKLDPDLSSLPDNEGRTPLHWAAIKGR------ 71 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa~~g~~----~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~------ 71 (445)
|..+.++.+++.+++.. .|..|+||||+|+..|+. +++++||++|++++. +|.+|+||||+|+..|+
T Consensus 17 g~~~~~~~l~~~~~~~~--~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~TpLh~a~~~~~~~~~~~ 93 (186)
T 3t8k_A 17 GTYEDFLELFEKGYEDK--ESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS-RTKEGTTLFFPLFQGGGNDITGT 93 (186)
T ss_dssp SCHHHHHHHHHHSSSCH--HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-CCTTCCCTHHHHHHHCTTCHHHH
T ss_pred CCHHHHHHHHhcCcccc--cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCcchhhH
Confidence 55677888887765432 236799999999999985 599999999999987 89999999999999997
Q ss_pred HHHHHHHHhcCCCccccccccCc-chHhHHHHcC-----CHHHHHHHHH-hcCcccccCCCCCCCCcHHHHHHhCCcHHH
Q 013339 72 INIIDEILSLNLQSAEMRTIHGE-TVLHLTVKNN-----QYEAVKYLME-TLNITKLANMPDNDGNTILHLATAGKLTTM 144 (445)
Q Consensus 72 ~~iv~~Ll~~~~~~~~~~~~~g~-t~Lh~A~~~g-----~~~~v~~Ll~-~~~~~~~~n~~d~~g~T~LHlA~~~~~~~i 144 (445)
.++++.|+++| .+++.+|..|+ ||||+|+..+ +.+++++|++ . +.++|.+|.+|.||||+|+..++.++
T Consensus 94 ~~iv~~Ll~~G-adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~---gad~~~~d~~G~TpL~~A~~~~~~~~ 169 (186)
T 3t8k_A 94 TELCKIFLEKG-ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS---GLQLLIKDKWGLTALEFVKRCQKPIA 169 (186)
T ss_dssp HHHHHHHHHTT-CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST---TCCTTCCCTTSCCHHHHHHTTTCHHH
T ss_pred HHHHHHHHHCC-CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc---CCCCcccCCCCCCHHHHHHHcCCHHH
Confidence 68899999998 68889999999 9999999954 4579999998 6 78899999999999999999999999
Q ss_pred HHHHHhcCCCccccc
Q 013339 145 VIYLLKLGVDVNAIN 159 (445)
Q Consensus 145 v~~Ll~~g~~~~~~n 159 (445)
+++|.+...+.+.++
T Consensus 170 v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 170 LKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhccc
Confidence 999997765555444
No 85
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=1.3e-23 Score=199.26 Aligned_cols=147 Identities=20% Similarity=0.293 Sum_probs=134.4
Q ss_pred CHHHHHHHHHHhchhhhcCCCCCCChHHHHHH-----HcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHH
Q 013339 2 HVADIVKELLEARQEFAWKKDLNGHTPLHLSC-----SKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIID 76 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d~~G~TpLH~Aa-----~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~ 76 (445)
|+.++++.|++.++...+..|..|.||||+|+ ..|+.++++.|++.|.+... .|..|+||||+|+..|+.++++
T Consensus 122 g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpLh~A~~~g~~~~v~ 200 (276)
T 4hbd_A 122 ANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAK-ASQAGQTALMLAVSHGRVDVVK 200 (276)
T ss_dssp TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCC-CTTTCCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHH
Confidence 67899999999998555588999999999999 67899999999999977765 7889999999999999999999
Q ss_pred HHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcC
Q 013339 77 EILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 152 (445)
Q Consensus 77 ~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g 152 (445)
.|++.+ .+++.+|.+|+||||+|+..|+.+++++|++. .+.+++.+|.+|+||||+|+..++.+++++|++++
T Consensus 201 ~Ll~~g-ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~--~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 201 ALLACE-ADVNVQDDDGSTALMCACEHGHKEIAGLLLAV--PSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTS--TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHhCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhc--CCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999998 57888999999999999999999999999982 17789999999999999999999999999999653
No 86
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=4.8e-24 Score=195.15 Aligned_cols=140 Identities=19% Similarity=0.270 Sum_probs=114.7
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhH
Q 013339 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 99 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~ 99 (445)
..|.+|.||||+||..|+.++++.|++.|++++. +|..|+||||+|+..|+.+++++|++.+...++.+|..|+||||+
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG-LDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHA 146 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHH
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHH
Confidence 4567789999999999999999999999999876 899999999999999999999999998557888899999999999
Q ss_pred HHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCC
Q 013339 100 TVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGY 163 (445)
Q Consensus 100 A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~ 163 (445)
|+..|+.+++++|+++ +..++.+|.+|.||||+|+..++.++++.|++.++..+..|.+|+
T Consensus 147 A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAK---GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHTCHHHHHHHHHH---TCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred HHHcCCHHHHHHHHHc---CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 9999999999999998 778899999999999999999999999999999999888776654
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=8.8e-24 Score=178.24 Aligned_cols=125 Identities=22% Similarity=0.304 Sum_probs=81.9
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhH
Q 013339 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 99 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~ 99 (445)
..|..|+||||+|+..|+.++++.|++.|++++. +|..|+||||+|+..|+.+++++|++.+ ...+.+|..|+||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV-KDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCCCCCHHHH
Confidence 4566777777777777777777777777777654 6677777777777777777777777765 3455556666666666
Q ss_pred HHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHH
Q 013339 100 TVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL 149 (445)
Q Consensus 100 A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll 149 (445)
|+..|+.+++++|++. +..++.+|.+|.||||+|+..+..+++++|.
T Consensus 83 A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~ 129 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSY---GASRNAVNIFGLRPVDYTDDESMKSLLLLPE 129 (137)
T ss_dssp HHHTTCHHHHHHHHHT---TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred HHHcCCHHHHHHHHHc---CCCCCCCCCCCCCHHHHHhhccHHHHHhhcc
Confidence 6666666666666655 4555666666666666666555555554443
No 88
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=4.1e-23 Score=174.09 Aligned_cols=132 Identities=24% Similarity=0.338 Sum_probs=115.6
Q ss_pred CCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCC
Q 013339 48 DPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDN 127 (445)
Q Consensus 48 ~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~ 127 (445)
|.|+ .+|.+|+||||+|+..|+.+++++|++.+ ...+.+|..|+||||+|+..|+.+++++|+++ +..++.+|.
T Consensus 1 G~d~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~ 74 (137)
T 3c5r_A 1 GIDP--FTNHRGETLLHIASIKGDIPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQH---KALVNTTGY 74 (137)
T ss_dssp ---C--CCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCG
T ss_pred CCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCcccCcCC
Confidence 3444 47999999999999999999999999987 56778899999999999999999999999998 778999999
Q ss_pred CCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhc
Q 013339 128 DGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAG 189 (445)
Q Consensus 128 ~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~g 189 (445)
+|+||||+|+..++.+++++|++.|++++.+|..|.||+++ +...+..+++++|.+.+
T Consensus 75 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~----A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 75 QNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDY----TDDESMKSLLLLPEKNE 132 (137)
T ss_dssp GGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGG----CCCHHHHHHHSCC----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH----HhhccHHHHHhhccccc
Confidence 99999999999999999999999999999999999999999 66667777777666544
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=2.9e-22 Score=165.43 Aligned_cols=126 Identities=39% Similarity=0.579 Sum_probs=117.3
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHH
Q 013339 58 EGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLAT 137 (445)
Q Consensus 58 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~ 137 (445)
+|+||||+|+..|+.+++++|++.+ ...+..+..|.||||+|+..|+.+++++|++. +..++.+|..|+||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA---GADVNAKDKNGRTPLHLAA 76 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHc---CCCCcccCCCCCcHHHHHH
Confidence 5899999999999999999999987 46677888999999999999999999999997 6778999999999999999
Q ss_pred hCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCc
Q 013339 138 AGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 191 (445)
Q Consensus 138 ~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~ 191 (445)
..++.+++++|+++|++++..|..|.||+++ +...++.+++++|++.|++
T Consensus 77 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~----A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 77 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHL----AARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----HHHTTCHHHHHHHHHHTCC
T ss_pred HcChHHHHHHHHHcCCCCcccCCCCCCHHHH----HHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999 5556788999999999974
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=5.6e-23 Score=182.43 Aligned_cols=140 Identities=23% Similarity=0.236 Sum_probs=122.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccc-ccCcchHhHH
Q 013339 22 DLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRT-IHGETVLHLT 100 (445)
Q Consensus 22 d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~-~~g~t~Lh~A 100 (445)
|.+|.||||+|+..|+.++++.|++ +.+++. +|..|+||||+|+..|+.+++++|++.+. .++.++ ..|+||||+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGA-DLDHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCSSSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcCCCCCCCCHHHHH
Confidence 5578999999999999999999999 888876 89999999999999999999999999984 555566 8899999999
Q ss_pred HHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhc
Q 013339 101 VKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQ 180 (445)
Q Consensus 101 ~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~ 180 (445)
+..|+.+++++|+++ +..++.+|.+|+||||+|+..++ ...+.+|+++ +...+..+
T Consensus 118 ~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~~~-----------------~~~~~~~l~~----a~~~~~~~ 173 (183)
T 3deo_A 118 AGYVRPEVVEALVEL---GADIEVEDERGLTALELAREILK-----------------TTPKGNPMQF----GRRIGLEK 173 (183)
T ss_dssp HHTTCHHHHHHHHHH---TCCTTCCCTTSCCHHHHHHHHHH-----------------TCCCCSHHHH----HHHHHHHH
T ss_pred HhcCcHHHHHHHHHc---CCCCcCCCCCCCCHHHHHHHhcc-----------------CcccccHHHH----HHHcCHHH
Confidence 999999999999998 77899999999999999986321 2467899999 55667888
Q ss_pred HHHHHHHh
Q 013339 181 IVPALEEA 188 (445)
Q Consensus 181 i~~~L~~~ 188 (445)
++++|.+.
T Consensus 174 i~~~L~~~ 181 (183)
T 3deo_A 174 VINVLEGQ 181 (183)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 99888653
No 91
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=1.6e-22 Score=170.39 Aligned_cols=127 Identities=26% Similarity=0.257 Sum_probs=115.9
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHH
Q 013339 55 PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILH 134 (445)
Q Consensus 55 ~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LH 134 (445)
....|.||||+|+..|+.++++.|++.+ ..++.+|..|+||||+|+.+|+.+++++|++. +..+|.+|.+|+||||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~t~L~ 85 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANG-ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKN---GADVNAVDAIGFTPLH 85 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTCCCHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCcCCCCCCCHHH
Confidence 4567899999999999999999999998 56788899999999999999999999999998 7789999999999999
Q ss_pred HHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhc
Q 013339 135 LATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAG 189 (445)
Q Consensus 135 lA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~g 189 (445)
+|+..++.+++++|+++|++++..|..|.||+++ +...++.+++++|++.|
T Consensus 86 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~----A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDI----SIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----HHHTTCHHHHHHHHHC-
T ss_pred HHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHH----HHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999 55567788999999875
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=1.2e-22 Score=167.92 Aligned_cols=111 Identities=21% Similarity=0.267 Sum_probs=84.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHH
Q 013339 22 DLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTV 101 (445)
Q Consensus 22 d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~ 101 (445)
+..|.||||+|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|++.+ ..++.+|..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTS-CCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCc-cCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHH
Confidence 45678888888888888888888888888765 7888888888888888888888888776 456666777777777777
Q ss_pred HcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHH
Q 013339 102 KNNQYEAVKYLMETLNITKLANMPDNDGNTILHLAT 137 (445)
Q Consensus 102 ~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~ 137 (445)
..|+.+++++|+++ +..++.+|.+|.||||+|.
T Consensus 82 ~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSK---GADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHhC
Confidence 77777777777776 5566777777777777773
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=1.6e-22 Score=188.04 Aligned_cols=143 Identities=22% Similarity=0.221 Sum_probs=125.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccc-ccCcchHhHH
Q 013339 22 DLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRT-IHGETVLHLT 100 (445)
Q Consensus 22 d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~-~~g~t~Lh~A 100 (445)
+.+|.||||+||..|+.++++.|++ +.+++. +|..|+||||+|+..|+.+++++|++++. .++.++ ..|.||||+|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGA-DLDHRDMRGGLTALHMA 118 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHHHTTC-CTTCCCSSSCCCHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCcCCCCCCCCHHHHH
Confidence 3478999999999999999999999 888876 89999999999999999999999999984 555555 7899999999
Q ss_pred HHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhc
Q 013339 101 VKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQ 180 (445)
Q Consensus 101 ~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~ 180 (445)
+.+|+.+++++|+++ +..++.+|.+|+||||+|+.. ..+..+.||+++ +...++.+
T Consensus 119 ~~~g~~~~v~~Ll~~---ga~~~~~d~~g~t~l~~A~~~-----------------~~~~~~~~~l~~----a~~~g~~~ 174 (244)
T 3ui2_A 119 AGYVRPEVVEALVEL---GADIEVEDERGLTALELAREI-----------------LKTTPKGNPMQF----GRRIGLEK 174 (244)
T ss_dssp HHTTCHHHHHHHHHT---TCCTTCCCTTCCCHHHHHHHH-----------------HTTCCCSSHHHH----HHHHHHHH
T ss_pred HHcCCHHHHHHHHHC---CCCCCCCCCCCCcHHHHHHHH-----------------HhccCCCCHHHH----HHHcChHH
Confidence 999999999999998 788999999999999999852 123578999999 55667888
Q ss_pred HHHHHHHhcCc
Q 013339 181 IVPALEEAGAR 191 (445)
Q Consensus 181 i~~~L~~~ga~ 191 (445)
++++|.+.+..
T Consensus 175 iv~~L~~~~~~ 185 (244)
T 3ui2_A 175 VINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHEE
T ss_pred HHHHHHHhccc
Confidence 99999987554
No 94
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=3.6e-23 Score=204.22 Aligned_cols=157 Identities=14% Similarity=0.123 Sum_probs=130.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhcCCCCC--CCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCc--cccccccCcch
Q 013339 21 KDLNGHTPLHLSCSKGHLEITRELLKLDPDLS--SLPDNEGRTPLHWAAIKGRINIIDEILSLNLQS--AEMRTIHGETV 96 (445)
Q Consensus 21 ~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~--~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~--~~~~~~~g~t~ 96 (445)
.+.+++||||+||..|+.++|+.|++.|+... ...|..|.||||+||..|+.+++++|++++++. .+..+.+ .||
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHH
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCH
Confidence 35567899999999999999999999987331 124667899999999999999999999998531 2223333 999
Q ss_pred HhHHHHcCCHHHHHHHHHhcCcccccCC--CCCCCCcHHHHHH-hCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhc
Q 013339 97 LHLTVKNNQYEAVKYLMETLNITKLANM--PDNDGNTILHLAT-AGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDA 173 (445)
Q Consensus 97 Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~--~d~~g~T~LHlA~-~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a 173 (445)
||+|+.+|+.+++++|+++ +..++. .|.+|.||||+|+ ..|+.+++++|++.|+ .|.||++. +
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~---ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~----A 232 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCEL---APTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIH----E 232 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHS---CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHC----T
T ss_pred HHHHHHCCCHHHHHHHHHc---CCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHH----H
Confidence 9999999999999999998 566665 7888999999999 9999999999998764 38899998 7
Q ss_pred cccchhcHHHHHHHhcCcc
Q 013339 174 SNSGALQIVPALEEAGARR 192 (445)
Q Consensus 174 ~~~~~~~i~~~L~~~ga~~ 192 (445)
...++.+++++|++.|+..
T Consensus 233 a~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 233 FEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp TTTTTTTHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCccc
Confidence 7888999999999998764
No 95
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.86 E-value=4.1e-22 Score=171.99 Aligned_cols=131 Identities=16% Similarity=0.180 Sum_probs=116.0
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCc-HH
Q 013339 55 PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNT-IL 133 (445)
Q Consensus 55 ~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T-~L 133 (445)
.+..|.||||+|+..|+.+++++|++.+ ..++.+|..|+||||+|+ +|+.+++++|++. +..+|.+|..|+| ||
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~---g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAG-ANPNAPNSYGRRPIQVMM-MGSARVAELLLLH---GAEPNCADPATLTRPV 82 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTT-CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTT---TCCCCCCCTTTCCCHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHc---CCCCCCcCCCCCcHHH
Confidence 5778999999999999999999999997 567888999999999985 9999999999987 7789999999999 99
Q ss_pred HHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013339 134 HLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 134 HlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
|+|+..++.+++++|+++|++++.+|..|.|||++ +...++.+++++|+++|++...
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~----A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDL----AEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHH----HHHHTCHHHHHHHSSCC-----
T ss_pred HHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHH----HHHhCHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999999999999999 4556778999999999987643
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=1.6e-21 Score=161.15 Aligned_cols=110 Identities=21% Similarity=0.274 Sum_probs=102.2
Q ss_pred CCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHH
Q 013339 56 DNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHL 135 (445)
Q Consensus 56 d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHl 135 (445)
+..|.||||+|+..|+.++++.|++.+ ..++.+|..|+||||+|+..|+.+++++|++. +..+|.+|.+|+||||+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLK---GADINAPDKHHITPLLS 79 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTT---TCCTTCCCTTSCCHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCcCCCCCCCHHHH
Confidence 557899999999999999999999988 46788899999999999999999999999987 77899999999999999
Q ss_pred HHhCCcHHHHHHHHhcCCCccccccCCCCHHHHH
Q 013339 136 ATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVV 169 (445)
Q Consensus 136 A~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a 169 (445)
|+..++.+++++|+++|++++..|..|.||+++|
T Consensus 80 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 9999999999999999999999999999999994
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=187.75 Aligned_cols=137 Identities=18% Similarity=0.164 Sum_probs=118.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCCCCC-----CCCCCccHHHHHHHc---CCHHHHHHHHhcCCCccccccccCcc
Q 013339 24 NGHTPLHLSCSKGHLEITRELLKLDPDLSSL-----PDNEGRTPLHWAAIK---GRINIIDEILSLNLQSAEMRTIHGET 95 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~-----~d~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~~~~~~~~~g~t 95 (445)
.+.++||.|+..|+.+.++.|++.|++++.. .|..|.||||+|+.. |+.+++++|++.+ ..++.+|.+|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCCCCCCC
Confidence 3557899999999999999999999988763 588899999999997 8999999999987 567788899999
Q ss_pred hHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHh
Q 013339 96 VLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVE 170 (445)
Q Consensus 96 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~ 170 (445)
|||+|+..|+.+++++|++. +++++.+|.+|.||||+|+..++.+++++|++.|++ .|.||||+|.
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~---gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~ 294 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKG---RALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDY 294 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHT---TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC---
T ss_pred HHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHH
Confidence 99999999999999999987 778899999999999999999999999999988876 5889999954
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=6.4e-22 Score=175.56 Aligned_cols=137 Identities=22% Similarity=0.238 Sum_probs=116.5
Q ss_pred HHHcCCHHHHHHHhhcCCCCCCC----------CCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHH
Q 013339 32 SCSKGHLEITRELLKLDPDLSSL----------PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTV 101 (445)
Q Consensus 32 Aa~~g~~~iv~~LL~~~~~~~~~----------~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~ 101 (445)
|++.|..+++++|++.+...... .+.+|.||||+|+..|+.++++.|++ + ..++.+|..|+||||+|+
T Consensus 7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~d~~g~t~L~~A~ 84 (183)
T 3deo_A 7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-D-RDVDAVDENGRTALLFVA 84 (183)
T ss_dssp EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-T-SCTTCCCTTSCCHHHHHH
T ss_pred HHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-c-CCCCCcCCCCCCHHHHHH
Confidence 34455566666666543322111 25688999999999999999999999 4 678889999999999999
Q ss_pred HcCCHHHHHHHHHhcCcccccCCCC-CCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhc
Q 013339 102 KNNQYEAVKYLMETLNITKLANMPD-NDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDA 173 (445)
Q Consensus 102 ~~g~~~~v~~Ll~~~~~~~~~n~~d-~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a 173 (445)
.+|+.+++++|+++ +..+|.+| .+|+||||+|+..++.+++++|+++|++++.+|..|.||+++|.+..
T Consensus 85 ~~~~~~~v~~Ll~~---ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 85 GLGSDKCVRLLAEA---GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp HHTCHHHHHHHHHT---TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHc---CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc
Confidence 99999999999998 77888888 89999999999999999999999999999999999999999976543
No 99
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=1.1e-20 Score=185.70 Aligned_cols=142 Identities=15% Similarity=0.125 Sum_probs=116.6
Q ss_pred CCCChHHHHHHHc-CCHHHHHHHhhcCCCCCCCCC--CCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhH
Q 013339 23 LNGHTPLHLSCSK-GHLEITRELLKLDPDLSSLPD--NEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 99 (445)
Q Consensus 23 ~~G~TpLH~Aa~~-g~~~iv~~LL~~~~~~~~~~d--~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~ 99 (445)
..+.||||.|+.. |+.++++.|++.|++++. .| ..|.||||+|+..|+.+++++|++++ ..++..|..|+||||+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~-~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpLh~ 274 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNW-VNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPLHH 274 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTC-CCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCc-cccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHH
Confidence 4567899999999 999999999999999977 56 89999999999999999999999998 6778899999999999
Q ss_pred HHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcC---CCccccccCCCCHHHHH
Q 013339 100 TVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG---VDVNAINRKGYTALDVV 169 (445)
Q Consensus 100 A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g---~~~~~~n~~G~Tpl~~a 169 (445)
|+..|+.+++++|+++ +++++.+|.+|.||||+|+..++.+++++|+..+ .+....+..+.|+++++
T Consensus 275 A~~~g~~~~v~~LL~~---Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~ 344 (368)
T 3jue_A 275 ATILGHTGLACLFLKR---GADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIF 344 (368)
T ss_dssp HHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------
T ss_pred HHHcCcHHHHHHHHHC---cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHH
Confidence 9999999999999998 7889999999999999999999999999999654 44455667788888884
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=6.1e-21 Score=174.42 Aligned_cols=167 Identities=20% Similarity=0.202 Sum_probs=129.5
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCC--------------CCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCc
Q 013339 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPD--------------LSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQS 85 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~--------------~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~ 85 (445)
..|.++.++.+++.+.|....+..+.+.+.- .....|.+|.||||+||..|+.++++.|++.+ ..
T Consensus 20 l~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~ 98 (222)
T 3ehr_A 20 LYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNR-VG 98 (222)
T ss_dssp SSCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTT-CC
T ss_pred eCCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCC-CC
Confidence 4466677778877777765433222211100 00113557899999999999999999999988 56
Q ss_pred cccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCH
Q 013339 86 AEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTA 165 (445)
Q Consensus 86 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tp 165 (445)
++.+|..|+||||+|+.+|+.+++++|++.. +..+|.+|.+|+||||+|+..++.+++++|+++|++++.+|..|.||
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~--g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 176 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQP--NIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLA 176 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTST--TCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCC--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCH
Confidence 7888999999999999999999999998752 56789999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccccchhcHHHHHHHhcCccc
Q 013339 166 LDVVESDASNSGALQIVPALEEAGARRC 193 (445)
Q Consensus 166 l~~a~~~a~~~~~~~i~~~L~~~ga~~~ 193 (445)
+++ +...+..++++.|++.|+...
T Consensus 177 l~~----A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 177 FDM----ATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HHH----CCSHHHHHHHC----------
T ss_pred HHH----hcchhHHHHHHHHhccchhhh
Confidence 999 777888999999998887654
No 101
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=3e-20 Score=190.62 Aligned_cols=131 Identities=18% Similarity=0.198 Sum_probs=117.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCCCCC-----CCCCCccHHHHHHH---cCCHHHHHHHHhcCCCccccccccCcc
Q 013339 24 NGHTPLHLSCSKGHLEITRELLKLDPDLSSL-----PDNEGRTPLHWAAI---KGRINIIDEILSLNLQSAEMRTIHGET 95 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~-----~d~~G~TpLh~Aa~---~G~~~iv~~Ll~~~~~~~~~~~~~g~t 95 (445)
...+.||.|+..|+.+.|+.||+.|++++.. .|..|.||||+|+. .|+.+++++|++++ .+++.+|.+|+|
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~T 209 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNT 209 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCC
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCc
Confidence 3457899999999999999999999998752 28899999999976 99999999999998 678899999999
Q ss_pred hHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCcccc
Q 013339 96 VLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAI 158 (445)
Q Consensus 96 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~ 158 (445)
|||+|+.+|+.+++++|+++ ++++|.+|.+|+||||+|+..++.+++++|+++|++++..
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKG---RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHT---CCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 99999999999999999998 8889999999999999999999999999999999998774
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=181.09 Aligned_cols=130 Identities=19% Similarity=0.194 Sum_probs=110.9
Q ss_pred CHHHHHHHHHHhchhhhcC-----CCCCCChHHHHHHHc---CCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHH
Q 013339 2 HVADIVKELLEARQEFAWK-----KDLNGHTPLHLSCSK---GHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRIN 73 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~-----~d~~G~TpLH~Aa~~---g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~ 73 (445)
+..+.++.|++.+++++.. .|..|+||||+|+.. |+.+++++|+++|++++. +|.+|+||||+|+..|+.+
T Consensus 162 g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~ 240 (301)
T 2b0o_E 162 RDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNTALHYAALYNQPD 240 (301)
T ss_dssp TCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC-CCTTCCCHHHHHHHTTCHH
T ss_pred cCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHH
Confidence 4678899999999887743 688999999999997 899999999999999977 8999999999999999999
Q ss_pred HHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcH
Q 013339 74 IIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLT 142 (445)
Q Consensus 74 iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~ 142 (445)
++++|++.+ .+++.+|.+|+||||+|+..|+.+++++|++. +.. .|.||||+|+..|+.
T Consensus 241 ~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~---ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 241 CLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQA---QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHTT-CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHH---HHH------TTSSCCC--------
T ss_pred HHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh---cCC------CCCChhHHHHhcCCc
Confidence 999999998 67788999999999999999999999999987 322 689999999988753
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=1.5e-19 Score=171.30 Aligned_cols=166 Identities=19% Similarity=0.164 Sum_probs=138.8
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCC-------------------------CC-----CCCCccHHHHHHHc
Q 013339 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSS-------------------------LP-----DNEGRTPLHWAAIK 69 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~-------------------------~~-----d~~G~TpLh~Aa~~ 69 (445)
..|.-+.++|+.+...|+..+.+++...-++... .. +....++|+.|+..
T Consensus 61 ~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~ 140 (278)
T 1dcq_A 61 TLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKT 140 (278)
T ss_dssp TTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHT
T ss_pred ecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhh
Confidence 4677889999999999998777766533211100 00 01124689999999
Q ss_pred CCHHHHHHHHhcCCCc-----cccccccCcchHhHHHHc---CCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCc
Q 013339 70 GRINIIDEILSLNLQS-----AEMRTIHGETVLHLTVKN---NQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKL 141 (445)
Q Consensus 70 G~~~iv~~Ll~~~~~~-----~~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~ 141 (445)
|+.+.++.+++.+.+. .+..+..|+||||+|+.+ |+.+++++|+++ +..+|.+|.+|+||||+|+..|+
T Consensus 141 ~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~---ga~in~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 141 RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN---SGNLDKQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp TCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH---CSCTTCCCTTCCCHHHHHHHTTC
T ss_pred cccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC---CCCccccCCCCCCHHHHHHHcCC
Confidence 9999999999998654 344578899999999999 899999999998 78899999999999999999999
Q ss_pred HHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcc
Q 013339 142 TTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 192 (445)
Q Consensus 142 ~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~ 192 (445)
.+++++|+++|++++.+|..|.||||+ |...++.+++++|+++|+.+
T Consensus 218 ~~~v~~Ll~~gad~~~~d~~g~tpL~~----A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 218 AECLKLLLRGKASIEIANESGETPLDI----AKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHH----HHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCccCCCCCHHHH----HHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999 55567889999999999864
No 104
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.81 E-value=1e-21 Score=182.59 Aligned_cols=158 Identities=21% Similarity=0.219 Sum_probs=128.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHH
Q 013339 23 LNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVK 102 (445)
Q Consensus 23 ~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~ 102 (445)
..+.+++.+++..|+.+.+..+...+.++ +.+|.||||+|+..|+.++++.|++ + ..++.+|..|+||||+|+.
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~d~~g~t~L~~A~~ 86 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAADV----VSEYETPWWTAARKADEQALSQLLE-D-RDVDAVDENGRTALLFVAG 86 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHHH----HHHHHHHHHHHHTTTCHHHHHHTTT-T-CCTTCBCTTSCBHHHHHHH
T ss_pred CCCccHHHHHHHcCCCccccccccccccc----ccCCCCHHHHHHHcCCHHHHHHHHc-C-CCCCCcCCCCCCHHHHHHH
Confidence 34556666666666665555544444332 4579999999999999999999999 4 6788899999999999999
Q ss_pred cCCHHHHHHHHHhcCcccccCCCC-CCCCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcH
Q 013339 103 NNQYEAVKYLMETLNITKLANMPD-NDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQI 181 (445)
Q Consensus 103 ~g~~~~v~~Ll~~~~~~~~~n~~d-~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i 181 (445)
+|+.+++++|+++ +..+|.+| ..|+||||+|+..++.+++++|+++|++++..|..|.||+|+|............
T Consensus 87 ~g~~~~v~~Ll~~---ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~ 163 (244)
T 3ui2_A 87 LGSDKCVRLLAEA---GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNP 163 (244)
T ss_dssp HTCHHHHHHHHHT---TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSH
T ss_pred CCCHHHHHHHHHc---CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCH
Confidence 9999999999998 78888888 8899999999999999999999999999999999999999998765444433444
Q ss_pred HHHHHHhc
Q 013339 182 VPALEEAG 189 (445)
Q Consensus 182 ~~~L~~~g 189 (445)
+.+-.+.|
T Consensus 164 l~~a~~~g 171 (244)
T 3ui2_A 164 MQFGRRIG 171 (244)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcC
Confidence 44444444
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=1.7e-19 Score=170.91 Aligned_cols=126 Identities=18% Similarity=0.156 Sum_probs=116.3
Q ss_pred ChHHHHHHHcCCHHHHHHHhhcCCCCCCC-----CCCCCccHHHHHHHc---CCHHHHHHHHhcCCCccccccccCcchH
Q 013339 26 HTPLHLSCSKGHLEITRELLKLDPDLSSL-----PDNEGRTPLHWAAIK---GRINIIDEILSLNLQSAEMRTIHGETVL 97 (445)
Q Consensus 26 ~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~-----~d~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~~~~~~~~~g~t~L 97 (445)
.++||.|+..|+.+.++.+++.|++++.. .|..|+||||+|+.. |+.+++++|++++ ..++.+|..|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCCHH
Confidence 47899999999999999999999986432 488999999999999 8999999999998 56888899999999
Q ss_pred hHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCCc
Q 013339 98 HLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDV 155 (445)
Q Consensus 98 h~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~~ 155 (445)
|+|+.+|+.+++++|+++ +++++.+|.+|.||||+|+..++.+++++|+++|++.
T Consensus 210 h~A~~~g~~~~v~~Ll~~---gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRG---KASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHc---CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999997 7889999999999999999999999999999888753
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=1.2e-19 Score=142.07 Aligned_cols=90 Identities=40% Similarity=0.712 Sum_probs=69.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHc
Q 013339 24 NGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKN 103 (445)
Q Consensus 24 ~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 103 (445)
+|+||||+|+..|+.++++.|++.|++++. +|.+|+||||+|+..|+.+++++|++.+ ..++.+|.+|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHc
Confidence 478888888888888888888888888766 7888888888888888888888888876 45566677777777777777
Q ss_pred CCHHHHHHHHHh
Q 013339 104 NQYEAVKYLMET 115 (445)
Q Consensus 104 g~~~~v~~Ll~~ 115 (445)
|+.+++++|++.
T Consensus 79 ~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 79 GHLEVVKLLLEA 90 (93)
T ss_dssp TCHHHHHHHHHT
T ss_pred CCHHHHHHHHHc
Confidence 777777777765
No 107
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=8.9e-22 Score=194.20 Aligned_cols=147 Identities=9% Similarity=0.091 Sum_probs=120.8
Q ss_pred CHHHHHHHHHHhchhh--hcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCC--CCCCCCCccHHHHHHHcCCHHHHHH
Q 013339 2 HVADIVKELLEARQEF--AWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLS--SLPDNEGRTPLHWAAIKGRINIIDE 77 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~--~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~--~~~d~~G~TpLh~Aa~~G~~~iv~~ 77 (445)
|+.|+++.|++.+... ....|..|.||||+||..|+.++|++|+++|++.. .+.+.+ .||||+||..|+.+++++
T Consensus 103 G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~ 181 (376)
T 2aja_A 103 GCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNR 181 (376)
T ss_dssp CCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHH
Confidence 6789999999987621 12345678999999999999999999999997531 112333 999999999999999999
Q ss_pred HHhcCCCcccc--ccccCcchHhHHH-HcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCCcHHHHHHHHhcCCC
Q 013339 78 ILSLNLQSAEM--RTIHGETVLHLTV-KNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD 154 (445)
Q Consensus 78 Ll~~~~~~~~~--~~~~g~t~Lh~A~-~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~~~~iv~~Ll~~g~~ 154 (445)
|++++++ ... .|.+|.||||+|+ .+|+.+++++|++. +. .|+||||.|+..|+.+++++|++.|++
T Consensus 182 Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~---ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~ 250 (376)
T 2aja_A 182 LCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDC---PV-------MLAYAEIHEFEYGEKYVNPFIARHVNR 250 (376)
T ss_dssp HHHSCGG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS---HH-------HHHHHHHCTTTTTTTTHHHHHHHHHHH
T ss_pred HHHcCCc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC---CC-------ccchHHHHHHHCCCHHHHHHHHhcCcc
Confidence 9999853 343 7888999999999 99999999999985 32 389999999999999999999999998
Q ss_pred cccccc
Q 013339 155 VNAINR 160 (445)
Q Consensus 155 ~~~~n~ 160 (445)
++..+.
T Consensus 251 ~~~~~~ 256 (376)
T 2aja_A 251 LKEMHD 256 (376)
T ss_dssp HHHHHT
T ss_pred cccccH
Confidence 876654
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=6.2e-20 Score=149.60 Aligned_cols=108 Identities=34% Similarity=0.402 Sum_probs=63.9
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHH
Q 013339 55 PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILH 134 (445)
Q Consensus 55 ~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LH 134 (445)
+|.+|+||||+|+..|+.++++.|++.+ ..++.+|..|.||||+|+..|+.+++++|++. +..++.+|.+|.||||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK---GADVNARSKDGNTPEH 80 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTT---TCCTTCCCTTCCCTTH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc---CCCCcccCCCCCCHHH
Confidence 3444555555555555555555555444 23344444555555555555555555555554 4456666777777777
Q ss_pred HHHhCCcHHHHHHHHhcCCCccccccCCCCHH
Q 013339 135 LATAGKLTTMVIYLLKLGVDVNAINRKGYTAL 166 (445)
Q Consensus 135 lA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl 166 (445)
+|+..++.+++++|+++|+++|..+..|.||-
T Consensus 81 ~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 77777777777777777777777777777763
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=2.5e-19 Score=140.35 Aligned_cols=93 Identities=35% Similarity=0.534 Sum_probs=82.2
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHH
Q 013339 58 EGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLAT 137 (445)
Q Consensus 58 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~ 137 (445)
+|+||||+|+..|+.+++++|++.+ ..++.+|..|+||||+|+.+|+.+++++|+++ +..++.+|.+|+||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA---GADVNAKDKNGRTPLHLAA 76 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCccCCCCCCHHHHHH
Confidence 4889999999999999999999987 56788888999999999999999999999987 7778899999999999999
Q ss_pred hCCcHHHHHHHHhcCCC
Q 013339 138 AGKLTTMVIYLLKLGVD 154 (445)
Q Consensus 138 ~~~~~~iv~~Ll~~g~~ 154 (445)
..++.+++++|+++|++
T Consensus 77 ~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 77 RNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HTTCHHHHHHHHHTTCC
T ss_pred HcCCHHHHHHHHHcCCC
Confidence 99999999999988874
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=5.9e-20 Score=149.71 Aligned_cols=109 Identities=30% Similarity=0.407 Sum_probs=99.5
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhH
Q 013339 20 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 99 (445)
Q Consensus 20 ~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~ 99 (445)
..|.+|+||||+||..|+.++++.|+++|++++. +|..|.||||+|+..|+.+++++|++.+ ...+.+|..|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA-RSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC-CCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHH
Confidence 4688999999999999999999999999999876 8999999999999999999999999997 5678889999999999
Q ss_pred HHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHH
Q 013339 100 TVKNNQYEAVKYLMETLNITKLANMPDNDGNTIL 133 (445)
Q Consensus 100 A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~L 133 (445)
|+..|+.+++++|+++ +..+|.++..|.||-
T Consensus 82 A~~~~~~~~~~~Ll~~---ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAK---GADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTT---SSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHc---CCCCCcCCccccccc
Confidence 9999999999999988 788899999998873
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=7.4e-19 Score=172.72 Aligned_cols=136 Identities=18% Similarity=0.190 Sum_probs=105.1
Q ss_pred CHHHHHHHHHHhchhhhcCCC--CCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHH
Q 013339 2 HVADIVKELLEARQEFAWKKD--LNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEIL 79 (445)
Q Consensus 2 ~~~d~v~~Ll~~~~~~~~~~d--~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll 79 (445)
+..++++.|++.+.+++ ..| ..|.||||+||..|+.++|++|+++|++++. +|..|+||||+|+..|+.+++++|+
T Consensus 211 g~~~~v~~LL~~Gadvn-~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-~d~~G~TpLh~A~~~g~~~~v~~LL 288 (368)
T 3jue_A 211 PSLPTMADALAHGADVN-WVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ-ADSAGRGPLHHATILGHTGLACLFL 288 (368)
T ss_dssp CCHHHHHHHHHTTCCTT-CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCC-ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 57899999999998887 445 8899999999999999999999999999976 8999999999999999999999999
Q ss_pred hcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHHHHHhCC
Q 013339 80 SLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGK 140 (445)
Q Consensus 80 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LHlA~~~~ 140 (445)
+++ ..++.+|.+|.||||+|+..|+.+++++|++...........+..+.|+++++....
T Consensus 289 ~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 289 KRG-ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HCc-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 998 677889999999999999999999999999875555555566778899998876543
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=5.5e-18 Score=173.84 Aligned_cols=129 Identities=26% Similarity=0.231 Sum_probs=113.8
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCccccc------cccCcchHhHHHH---cCCHHHHHHHHHhcCcccccCCCCCC
Q 013339 58 EGRTPLHWAAIKGRINIIDEILSLNLQSAEMR------TIHGETVLHLTVK---NNQYEAVKYLMETLNITKLANMPDND 128 (445)
Q Consensus 58 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~------~~~g~t~Lh~A~~---~g~~~~v~~Ll~~~~~~~~~n~~d~~ 128 (445)
...+.||.|+..|+.++++.|++.+. +++.. +..|+||||+|+. .|+.+++++|+++ ++++|.+|.+
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~-~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~---ga~vn~~d~~ 206 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQ-DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN---GGHLDAKAAD 206 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTC-CSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH---SCCTTCCCSS
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcc-cccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc---CCCCCccCCC
Confidence 34478999999999999999999984 44444 7789999999966 8999999999998 7889999999
Q ss_pred CCcHHHHHHhCCcHHHHHHHHhcCCCccccccCCCCHHHHHhhhccccchhcHHHHHHHhcCcccC
Q 013339 129 GNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 194 (445)
Q Consensus 129 g~T~LHlA~~~~~~~iv~~Ll~~g~~~~~~n~~G~Tpl~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 194 (445)
|+||||+|+..|+.+++++|+++|++++.+|..|.||||+ |...++.+++++|+++|++...
T Consensus 207 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~----A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 207 GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI----ARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp SCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHH----HHHTTCHHHHHHHHHTCC----
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH----HHHcCCHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999999 5566788999999999998654
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=5.3e-18 Score=137.21 Aligned_cols=97 Identities=20% Similarity=0.296 Sum_probs=81.6
Q ss_pred chhhhcCCCCCCChHHHHHHHcCCHHHHHHHhhcCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccC
Q 013339 14 RQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHG 93 (445)
Q Consensus 14 ~~~~~~~~d~~G~TpLH~Aa~~g~~~iv~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g 93 (445)
.|......|.+|.||||+||..|+.++++.|++.|++++. +|..|+||||+|+..|+.+++++|++++ ...+.+|..|
T Consensus 13 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~-~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g 90 (110)
T 2zgd_A 13 LVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAA-KDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFG 90 (110)
T ss_dssp ---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTS
T ss_pred CCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCC
Confidence 3445567889999999999999999999999999999876 7999999999999999999999999987 5677888899
Q ss_pred cchHhHHHHcCCHHHHHHH
Q 013339 94 ETVLHLTVKNNQYEAVKYL 112 (445)
Q Consensus 94 ~t~Lh~A~~~g~~~~v~~L 112 (445)
.||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999876
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.65 E-value=3.2e-16 Score=126.66 Aligned_cols=90 Identities=21% Similarity=0.242 Sum_probs=74.1
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccccCcchHhHHHHcCCHHHHHHHHHhcCcccccCCCCCCCCcHHH
Q 013339 55 PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILH 134 (445)
Q Consensus 55 ~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~n~~d~~g~T~LH 134 (445)
.|.+|.||||+|+..|+.++++.|++.+ ..++.+|..|+||||+|+.+|+.+++++|+++ +..++.+|.+|+||||
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEA---GADVXAQDKFGKTAFD 95 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccccccCCCcHHH
Confidence 5778888888888888888888888876 46677788888888888888888888888887 6678888888888888
Q ss_pred HHHhCCcHHHHHHH
Q 013339 135 LATAGKLTTMVIYL 148 (445)
Q Consensus 135 lA~~~~~~~iv~~L 148 (445)
+|+..++.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 88888888888776
No 115
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=67.82 E-value=12 Score=35.19 Aligned_cols=20 Identities=15% Similarity=0.433 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 013339 337 VMWLSVSFLAAAYIAAIWTI 356 (445)
Q Consensus 337 ~l~~si~~m~~af~~~~~~v 356 (445)
+..+|+.++..+|++|+|=+
T Consensus 282 LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 282 LTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhhccC
Confidence 44468888999999999954
No 116
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=53.99 E-value=12 Score=35.59 Aligned_cols=20 Identities=20% Similarity=0.542 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 013339 337 VMWLSVSFLAAAYIAAIWTI 356 (445)
Q Consensus 337 ~l~~si~~m~~af~~~~~~v 356 (445)
+..+|+.+|..+|++|+|=+
T Consensus 306 LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 306 LTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHhhhcc
Confidence 44468888999999999843
No 117
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=51.61 E-value=35 Score=24.56 Aligned_cols=31 Identities=10% Similarity=-0.063 Sum_probs=17.5
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh
Q 013339 367 SAAVVSLGGGFTLAIFTGLGVLLARHWLRKW 397 (445)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (445)
.|++.++++.+++.+.+.+.++++..+--+.
T Consensus 12 ~Iv~gvi~gilliGllllliwk~~~~i~Drr 42 (79)
T 2knc_B 12 VVLLSVMGAILLIGLAALLIWKLLITIHDRK 42 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555666666666666665554333
No 118
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=48.75 E-value=31 Score=22.85 Aligned_cols=21 Identities=33% Similarity=0.292 Sum_probs=10.7
Q ss_pred CCchHHHHHHHHHhhhHHHHH
Q 013339 361 RGMVWVSAAVVSLGGGFTLAI 381 (445)
Q Consensus 361 ~~~~w~~~~~~~~~~~~~~~~ 381 (445)
....|..|.+.+++|.++.++
T Consensus 8 ~~vp~wiIi~svl~GLllL~l 28 (54)
T 2knc_A 8 RAIPIWWVLVGVLGGLLLLTI 28 (54)
T ss_dssp TTCCHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHH
Confidence 344555555666665444333
No 119
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=31.24 E-value=75 Score=19.76 Aligned_cols=19 Identities=32% Similarity=0.232 Sum_probs=9.3
Q ss_pred chHHHHHHHHHhhhHHHHH
Q 013339 363 MVWVSAAVVSLGGGFTLAI 381 (445)
Q Consensus 363 ~~w~~~~~~~~~~~~~~~~ 381 (445)
..|..|.+.++++.++.++
T Consensus 8 vp~wiIi~s~l~GLllL~l 26 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLLLTI 26 (42)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 4455555555554444333
No 120
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=29.51 E-value=24 Score=24.25 Aligned_cols=19 Identities=42% Similarity=0.857 Sum_probs=12.7
Q ss_pred HHHhhhHHHHHHHHHHHHH
Q 013339 371 VSLGGGFTLAIFTGLGVLL 389 (445)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~ 389 (445)
+++++++.+++|+.++...
T Consensus 12 ivlGg~~~lll~~glcI~c 30 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFF 30 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHH
Confidence 5777777777777666553
No 121
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=28.09 E-value=97 Score=20.41 Aligned_cols=18 Identities=11% Similarity=0.100 Sum_probs=8.4
Q ss_pred hHHHHHHHHHhhhHHHHH
Q 013339 364 VWVSAAVVSLGGGFTLAI 381 (445)
Q Consensus 364 ~w~~~~~~~~~~~~~~~~ 381 (445)
.|..|.+.+++|.++.++
T Consensus 8 p~WiIi~svl~GLLLL~L 25 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLML 25 (54)
T ss_dssp CTHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 344454555554443333
No 122
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=24.20 E-value=89 Score=17.24 Aligned_cols=12 Identities=25% Similarity=0.468 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHH
Q 013339 380 AIFTGLGVLLAR 391 (445)
Q Consensus 380 ~~~~~~~~~~~~ 391 (445)
..|+.++|+++.
T Consensus 16 ltflafgfwlfk 27 (32)
T 2lx0_A 16 LTFLAFGFWLFK 27 (32)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 445555555543
No 123
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=20.49 E-value=97 Score=19.47 Aligned_cols=8 Identities=38% Similarity=0.559 Sum_probs=3.4
Q ss_pred HHHHHHhh
Q 013339 368 AAVVSLGG 375 (445)
Q Consensus 368 ~~~~~~~~ 375 (445)
|..-++++
T Consensus 12 IA~gVVgG 19 (44)
T 2l2t_A 12 IAAGVIGG 19 (44)
T ss_dssp HHHHHHHH
T ss_pred EEEeehHH
Confidence 44444443
Done!