Your job contains 1 sequence.
>013340
MLQTVPPVTSSLWNSNPSQRVGQKGPMEFKSPQLSSISPHNLLLKFRCEHLQNAESMSSR
TFLCASRRPLQDLSFKKQKAYPQNVDLPTLPPKKKKKPYPIPIEKIRQVAKKDKRLAEMG
IEKPLEPPKNGILVPDLIHVAYEVIDAWKLLIKGLAQLLHVIPVYGCSECSEVHVAHSGH
HIQNCQGATAAKRRSFHSWVRGSINDILLPVESYHLYDPFGRRIKHESRFDYDRIPAVVE
LCIQAGVDIPEYPSRRRTKPIRTLGKKVIDRGGFVEEPRPWRSRGSSALSDLDTDGACGR
LPPPSLADVPRIAQETMDAYEVVRSGVTKLMRKYSVKACGYCPEVHIGPWGHNVKLCGAF
KHQWRDGKHGWQDAVVDEVFPPNYVWHVQDPKGPPLRSALKRYYGKAPAVVEVCMQAGAQ
VPEQYKPTMRLDIIVPESEEVDLVA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013340
(445 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010906 - symbol:APO1 "ACCUMULATION OF PHOTOSY... 1399 4.2e-143 1
TAIR|locus:2156151 - symbol:APO3 "ACCUMULATION OF PHOTOSY... 774 7.1e-77 1
TAIR|locus:2093069 - symbol:APO4 "AT3G21740" species:3702... 301 6.9e-53 2
>TAIR|locus:2010906 [details] [associations]
symbol:APO1 "ACCUMULATION OF PHOTOSYSTEM ONE 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009658 "chloroplast organization" evidence=IMP] [GO:0015979
"photosynthesis" evidence=IMP] [GO:0000373 "Group II intron
splicing" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] InterPro:IPR023342
Pfam:PF05634 PROSITE:PS51499 EMBL:CP002684 GO:GO:0009507
GO:GO:0008270 GO:GO:0009658 GO:GO:0003723 GO:GO:0010468
GO:GO:0015979 GO:GO:0000373 IPI:IPI00657498 RefSeq:NP_001031234.1
UniGene:At.28084 EnsemblPlants:AT1G64810.2 GeneID:842789
KEGG:ath:AT1G64810 OMA:GYCSEVH Uniprot:F4I896
Length = 460
Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
Identities = 253/387 (65%), Positives = 315/387 (81%)
Query: 61 TFLCASRRPLQDLSFKKQKAYPQNVDLPTLXXXXXXXXXXXXXXXXRQVAKKDKRLAEMG 120
T C +++ + SFKK+ QNVDLP + ++ A+KDK+LA+MG
Sbjct: 74 TVFCFNQKHREQTSFKKRYVSTQNVDLPPILPKNKKKPYPIPFKQIQEEARKDKKLAQMG 133
Query: 121 IEKPLEPPKNGILVPDLIHVAYEVIDAWKLLIKGLAQLLHVIPVYGCSECSEVHVAHSGH 180
IEK L+PPKNG+LVP+L+ VA +VID WKLLIKGLAQLLHV+PV+ CSEC VHVA+ GH
Sbjct: 134 IEKQLDPPKNGLLVPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAVHVANVGH 193
Query: 181 HIQNCQGATAAKRRSFHSWVRGSINDILLPVESYHLYDPFGRRIKHESRFDYDRIPAVVE 240
+I++C G T ++RR HSWV+G+IND+L+PVESYH+YDPFGRRIKHE+RF+Y+RIPA+VE
Sbjct: 194 NIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYERIPALVE 253
Query: 241 LCIQAGVDIPEYPSRRRTKPIRTLGKKVIDRGGFVEEP-RPWRSRG-SSALSDLDTDGAC 298
LCIQAGV+IPEYP RRRT+PIR +GK+VIDRGG+ +EP +P S SS L++LDT G
Sbjct: 254 LCIQAGVEIPEYPCRRRTQPIRMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAELDTLGVF 313
Query: 299 GRLPPPSLADVPRIAQETMDAYEVVRSGVTKLMRKYSVKACGYCPEVHIGPWGHNVKLCG 358
R PPP+ D+P+IAQETMDAYE VR GVTKLMRK++VKACGYC EVH+GPWGH+VKLCG
Sbjct: 314 ERYPPPTPEDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCG 373
Query: 359 AFKHQWRDGKHGWQDAVVDEVFPPNYVWHVQDPKGPPLRSALKRYYGKAPAVVEVCMQAG 418
FKHQWRDGKHGWQDA+VDEVFPPNYVWHV+D KG PL L+R+YGKAPA+VE+CM +G
Sbjct: 374 EFKHQWRDGKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPALVEICMHSG 433
Query: 419 AQVPEQYKPTMRLDIIVPESEEVDLVA 445
A+VP++YK MRLDIIVP+S+E D+VA
Sbjct: 434 ARVPQRYKAMMRLDIIVPDSQEADMVA 460
>TAIR|locus:2156151 [details] [associations]
symbol:APO3 "ACCUMULATION OF PHOTOSYSTEM ONE 3"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR023342 Pfam:PF05634 PROSITE:PS51499 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003723 EMBL:AB022212
EMBL:AF370553 EMBL:BT002086 IPI:IPI00524364 RefSeq:NP_001119475.1
RefSeq:NP_568945.2 UniGene:At.55672 UniGene:At.7885
EnsemblPlants:AT5G61930.1 EnsemblPlants:AT5G61930.2 GeneID:836314
KEGG:ath:AT5G61930 TAIR:At5g61930 eggNOG:NOG286945
HOGENOM:HOG000239455 InParanoid:Q9FH50 OMA:SMMRLDV PhylomeDB:Q9FH50
ProtClustDB:PLN00111 Genevestigator:Q9FH50 GermOnline:AT5G61930
Uniprot:Q9FH50
Length = 402
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 150/341 (43%), Positives = 227/341 (66%)
Query: 110 AKKDKRLAEMGIEKPLE-PPKNGILVPDLIHVAYEVIDAWKLLIKGLAQLLHVIPVYGCS 168
AK++K+L ++ + LE PP NG+LVP+L+ VA+ V +L+ GL++++H +PV+ C
Sbjct: 70 AKEEKQLRKLQPCRVLEDPPDNGLLVPELVDVAHCVHRCRNMLLSGLSKIIHHVPVHRCR 129
Query: 169 ECSEVHVAHSGHHIQNCQGATAAKRRSFHSWVRGSINDILLPVESYHLYDPFGR-RIKHE 227
C+EVH+ GH I+ C G + R + H W RG ++D++L + +HLYD + R+ H+
Sbjct: 130 LCAEVHIGKQGHEIRTCTGPGSGSRSATHVWKRGRVSDVVLFPKCFHLYDRAVKPRVIHD 189
Query: 228 SRFDYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRTLGKKVIDRGGFVEEPRPWRSR--G 285
RF +I AV+ELCIQAGVD+ ++PS+RR+KP+ ++ +++D F E+ S
Sbjct: 190 ERFTVPKISAVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVD---F-EDVNDGNSELAV 245
Query: 286 SSALSDLDTDGACGRLPPPSLADVPRIAQETMDAYEVVRSGVTKLMRKYSVKACGYCPEV 345
+S + + D C + SL + ++ ETM+++ + GV KLM +Y V CGYCPE+
Sbjct: 246 TSTTTLIQEDDRC-KEEKKSLKE---LSFETMESWFEMVLGVRKLMERYRVWTCGYCPEI 301
Query: 346 HIGPWGHNVKLCGAFKHQWRDGKHGWQDAVVDEVFPPNYVWHVQDPK-GPPLRSALKRYY 404
+GP GH V++C A KHQ RDG H WQ+A +D+V P YVWHV+DP G L ++LKR+Y
Sbjct: 302 QVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFY 361
Query: 405 GKAPAVVEVCMQAGAQVPEQYKPTMRLDIIVPESEEVDLVA 445
GKAPAV+E+C+Q GA VP+QY MRLD++ P+ +EVDLVA
Sbjct: 362 GKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEVDLVA 402
>TAIR|locus:2093069 [details] [associations]
symbol:APO4 "AT3G21740" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR023342 Pfam:PF05634
PROSITE:PS51499 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AB025634
HOGENOM:HOG000239455 ProtClustDB:PLN00111 EMBL:AK117492
IPI:IPI00528990 RefSeq:NP_188811.2 UniGene:At.38002 STRING:Q9LSZ0
PRIDE:Q9LSZ0 EnsemblPlants:AT3G21740.1 GeneID:821728
KEGG:ath:AT3G21740 TAIR:At3g21740 eggNOG:NOG236236
InParanoid:Q9LSZ0 OMA:GHKARLC PhylomeDB:Q9LSZ0
Genevestigator:Q9LSZ0 GermOnline:AT3G21740 Uniprot:Q9LSZ0
Length = 337
Score = 301 (111.0 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 64/138 (46%), Positives = 83/138 (60%)
Query: 114 KRLAEMGIEKPLEPPKNGILVPDLIHVAYEVIDAWKLLIKGLAQLLHVIPVYGCSECSEV 173
++L M I K +E V +++ VA E++ A K LI +A LL V PV C CSEV
Sbjct: 36 RKLRPM-ILKRIENRAKDYPVKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSEV 94
Query: 174 HVAHSGHHIQNCQGATAAKRRSFHSWVRGSINDILLPVESYHLYDPFGRRIKHESRFDYD 233
V GH I+ C+ H WV GSINDIL+PVESYHL++ I+H+ RFDYD
Sbjct: 95 FVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDYD 154
Query: 234 RIPAVVELCIQAGVDIPE 251
R+PA++ELC QAG PE
Sbjct: 155 RVPAILELCCQAGAIHPE 172
Score = 264 (98.0 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 53/125 (42%), Positives = 74/125 (59%)
Query: 308 DVPRIAQETMDAYEVVRSGVTKLMRKYSVKACGYCPEVHIGPWGHNVKLCGAFKHQ-WRD 366
D+ + + A+E VR+GV KL+ Y K C C EVH+GP GH +LCG FK++ WR
Sbjct: 198 DLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWR- 256
Query: 367 GKHGWQDAVVDEVFPPNYVWHVQDPKGPP-LRSALKRYYGKAPAVVEVCMQAGAQVPEQY 425
G H W+ A V+++ P VWH + P+ P L + YYG APA+V +C GA VP +Y
Sbjct: 257 GTHYWEKAGVNDLVPEKMVWH-RRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKY 315
Query: 426 KPTMR 430
M+
Sbjct: 316 ACKMK 320
Score = 161 (61.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 32/116 (27%), Positives = 63/116 (54%)
Query: 309 VPRIAQETMDAYEVVRSGVTKLMRKYSVKACGYCPEVHIGPWGHNVKLCGAFKHQWRDGK 368
VP +A+E + A + + S + L++ + V C +C EV +G GH ++ C ++ + +
Sbjct: 59 VP-VAEEILIARKNLISNIAALLKVFPVLTCKFCSEVFVGKEGHLIETCRSYIRRGNNRL 117
Query: 369 HGWQDAVVDEVFPPNYVWHVQDPKGPPLRSALKRYYGKAPAVVEVCMQAGAQVPEQ 424
H W ++++ P +H+ + +R + Y + PA++E+C QAGA PE+
Sbjct: 118 HEWVPGSINDILVPVESYHLHNISQGVIRHQERFDYDRVPAILELCCQAGAIHPEE 173
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 136 DLIHVAYEVIDAWKLLIKGLAQLLHVIPVYGCSECSEVHVAHSGHHIQNCQGATAAKRRS 195
DL +V + AW+ + G+ +LL V P C C EVHV SGH + C R
Sbjct: 198 DLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRG 257
Query: 196 FHSWVRGSINDILLPVESYHL--YDPFGRRIKHESRFDYDRIPAVVELCIQAGVDIP 250
H W + +ND++ +H DP + E R Y PA+V LC G +P
Sbjct: 258 THYWEKAGVNDLVPEKMVWHRRPQDPVV--LVDEGRSYYGHAPAIVSLCSHTGAIVP 312
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 445 429 0.00085 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 619 (66 KB)
Total size of DFA: 300 KB (2154 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.81u 0.23s 34.04t Elapsed: 00:00:02
Total cpu time: 33.81u 0.23s 34.04t Elapsed: 00:00:02
Start: Fri May 10 12:22:33 2013 End: Fri May 10 12:22:35 2013