BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013342
(445 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/477 (30%), Positives = 229/477 (48%), Gaps = 47/477 (9%)
Query: 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFN---------PPNPSNHPEFNFQS 51
+V++P P QGH+ P+ +L +L+ GF IT V+T +N P +FNF+S
Sbjct: 11 VVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFES 70
Query: 52 IPDGLT---ADDVSTGXXXXXXXXXXVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYD 108
IPDGLT D + N P+ E + R+ H + C++ D
Sbjct: 71 IPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRL-----NHSTNVPPVTCLVSD 125
Query: 109 EIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNKLQ-------- 160
F AA + L +++ ++SA + ++ + E G P +D + L
Sbjct: 126 CCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKV 185
Query: 161 DPVPGLHPLRFKDL-----PTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLA 215
D +PGL R KD+ T ++IM + I ++ + ++ NT + LE S +
Sbjct: 186 DWIPGLKNFRLKDIVDFIRTTNPNDIMLEFF--IEVADRVNKDTTILLNTFNELE-SDVI 242
Query: 216 XXXXXXXVPIFPIGPF----------HKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYV 265
I+PIGP H+ S N EDT C+ WL ++ P SV+YV
Sbjct: 243 NALSSTIPSIYPIGPLPSLLKQTPQIHQLD--SLDSNLWKEDTECLDWLESKEPGSVVYV 300
Query: 266 SLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIV 325
+ GS M ++ E AWGL N K+ FLW+IRP + G + + + G I
Sbjct: 301 NFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRP--DLVIGGSVIFSSEFTNEIADRGLIA 358
Query: 326 KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGX 385
W PQ +VL+H ++GGF +HCGWNST E +C GVPM+C P F DQ + R++ + W G
Sbjct: 359 SWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGM 418
Query: 386 XXXXXXXXXXXXKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442
K + ++ G++G++M+Q+A LK++ E GG SY +LN+ ++
Sbjct: 419 EIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIK 475
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 216/467 (46%), Gaps = 43/467 (9%)
Query: 1 MVLVPSPFQGHMTPMLQLGT-ILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTA- 58
+ ++PSP GH+ P+++ +++ +G ++T V PP+ + + S+P +++
Sbjct: 9 VAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD--SLPSSISSV 66
Query: 59 -------DDVSTGXXXXXXXXXXVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIF 111
D+S+ V P + + + P ++ D
Sbjct: 67 FLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPT------ALVVDLFG 120
Query: 112 YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNKLQDPV--PGLHPL 169
A + ++ I T+A L L L+E S ++ L +P+ PG P+
Sbjct: 121 TDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRE---LTEPLMLPGCVPV 177
Query: 170 RFKD-LPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAXXXX--XXXVPIF 226
KD L + + Y L+ + + + + ++ NT LE +++ P++
Sbjct: 178 AGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 237
Query: 227 PIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLV 286
P+GP E++ C+ WL+NQ SV+YVS GS ++ ++ E+A GL
Sbjct: 238 PVGPLVNIGKQEAKQT---EESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLA 294
Query: 287 NSKQPFLWVIR-PS---------SNNAPEGIDLLPEVLAEAVQENGCIVK-WAPQKEVLS 335
+S+Q FLWVIR PS S++ + + LP E ++ G ++ WAPQ +VL+
Sbjct: 295 DSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLA 354
Query: 336 HVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTG----XXXXXXX 391
H + GGF +HCGWNSTLE + G+P+I P + +Q++NA +S R
Sbjct: 355 HPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLV 414
Query: 392 XXXXXXKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLN 438
+ V+ LM GEEG+ +R + K LKE + + G+S K+L+
Sbjct: 415 RREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALS 461
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 171/350 (48%), Gaps = 17/350 (4%)
Query: 102 IACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEE-GSSPLQD-PNKL 159
++C++ D +F A ++ + + T + + + + + E+ G S +Q ++L
Sbjct: 113 VSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDEL 172
Query: 160 QDPVPGLHPLRFKDLP--TYRHEIMEHYLQLITSMYKIR-TSSAVIWNTMHYLEESSLAX 216
+ +PG+ +RF+DL + + +++ M ++ ++AV N+ L++S L
Sbjct: 173 LNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDS-LTN 231
Query: 217 XXXXXXVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKK 276
IGPF+ P N T C+ WL + P SV+Y+S G+V +
Sbjct: 232 DLKSKLKTYLNIGPFNLITPPPVVPN----TTGCLQWLKERKPTSVVYISFGTVTTPPPA 287
Query: 277 EPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSH 336
E ++ L S+ PF+W +R + LPE E + G +V WAPQ EVL+H
Sbjct: 288 EVVALSEALEASRVPFIWSLRDKARVH------LPEGFLEKTRGYGMVVPWAPQAEVLAH 341
Query: 337 VAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGXXXXXXXXXXXX 396
AVG F +HCGWNS E + GVP+ICRP FGDQR+N R V V G
Sbjct: 342 EAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSG 401
Query: 397 XKA-VRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFIN 445
+ +++ E+G+++R+ + L+E + + GSS ++ ++ ++
Sbjct: 402 LMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 198/460 (43%), Gaps = 51/460 (11%)
Query: 7 PFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNP-----SNH--PEFNFQSIPDGLTAD 59
PF H P+L L + + +T N SN P + ++ DGL
Sbjct: 22 PFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKG 81
Query: 60 DVSTGXXXXXXXXXXVNCQAPFFECMVRMMEQQQQHPAGD------DQIACIIYDEIFYF 113
VS+G N + P F ++ M++ +H + I C++ D F+F
Sbjct: 82 YVSSG-----------NPREPIF-LFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWF 129
Query: 114 PEAAANQLNLQSIILRTTSAATQISRLAL-LHLEEEGSSPLQDPNKLQDPVPGLHPLRFK 172
A +++ + + L T + ++ + L E+ GS + D + D +PG L+
Sbjct: 130 GADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSI-DVLPGFPELKAS 188
Query: 173 DLPTYRHEIMEHYLQLITSMYKI-----RTSSAVI--WNTMHYLEESSLAXXXXXXXVPI 225
DLP I + + T ++K+ R ++ I + T+H L E+ L +
Sbjct: 189 DLP--EGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKL----L 242
Query: 226 FPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGL 285
+GPF+ +T ++++ C+ WL+ SV+Y+S GSV + E +A L
Sbjct: 243 LNVGPFN----LTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESL 298
Query: 286 VNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSH 345
PF+W R + LP+ E + G IV WAPQ E+L H +VG F +H
Sbjct: 299 EECGFPFIWSFRGDPK------EKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTH 352
Query: 346 CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGX-XXXXXXXXXXXXKAVRRLM 404
GWNS LEC+ GVPMI RP FGDQ +N V G KA+ M
Sbjct: 353 SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTM 412
Query: 405 VGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444
E+G MRQ+ LKE + + G+S ++ +
Sbjct: 413 SSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIV 452
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 194 KIRTSSAVIWNTMHYLEESSLAXXXXXXXV--PIFPIGPFHKFAPFSTSCNFLNEDTSCI 251
+ R + +I NT LE+SS+ PI+ +GP + +
Sbjct: 208 RFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLIL 267
Query: 252 SWLNNQAPESVIYVSLGSVA-SMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLL 310
WL+ Q +SV+++ GS+ S + E+A GL +S FLW SN+A + +
Sbjct: 268 KWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW-----SNSAEKKV--F 320
Query: 311 PEVLAE--AVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFG 368
PE E ++ G I WAPQ EVL+H A+GGF SHCGWNS LE + GVP++ P +
Sbjct: 321 PEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYA 380
Query: 369 DQRVNARYVSHVWRTGXXXXXXXXXXXXXKAVRRLMVG-----EEGEEMRQRAKNLKEEI 423
+Q++NA + W G A + G ++ + ++ + +KE
Sbjct: 381 EQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMS 440
Query: 424 ELCITEGGSSYKSLNEFLEFIN 445
+ +GGSS S+ + ++ I
Sbjct: 441 RNAVVDGGSSLISVGKLIDDIT 462
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 194 KIRTSSAVIWNTMHYLEESSLAXXXXXXXV--PIFPIGPFHKFAPFSTSCNFLNEDTSCI 251
+ R + +I NT LE+SS+ PI+ +GP + +
Sbjct: 208 RFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLIL 267
Query: 252 SWLNNQAPESVIYVSLGSVA-SMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLL 310
WL+ Q +SV+++ GS+ S + E+A GL +S FLW SN+A + +
Sbjct: 268 KWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW-----SNSAEKKV--F 320
Query: 311 PEVLAE--AVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFG 368
PE E ++ G I WAPQ EVL+H A+GGF SHCGWNS LE + GVP++ P +
Sbjct: 321 PEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYA 380
Query: 369 DQRVNARYVSHVWRTGXXXXXXXXXXXXXKAVRRLMVG-----EEGEEMRQRAKNLKEEI 423
+Q++NA + W G A + G ++ + ++ + +KE
Sbjct: 381 EQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMS 440
Query: 424 ELCITEGGSSYKSLNEFLEFIN 445
+ +GGSS S+ + ++ I
Sbjct: 441 RNAVVDGGSSLISVGKLIDDIT 462
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 261 SVIYVSLGS-VASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ 319
V+ SLGS V++ ++ +A L Q LW N P+ + L
Sbjct: 22 GVVVFSLGSXVSNXTEERANVIASALAQIPQKVLWRF---DGNKPDTLGL---------- 68
Query: 320 ENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQ 370
N + KW PQ ++L H F +H G N E + G+P + P F DQ
Sbjct: 69 -NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQ 118
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 326 KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYV 377
+W PQ ++L+ + F +H G ST+E L VPM+ P +Q +NA +
Sbjct: 311 QWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERI 360
>pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp Bound Form
pdb|3OTH|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
pdb|3OTH|B Chain B, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
Length = 412
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 13/125 (10%)
Query: 246 EDTSCISWLNNQ-APESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAP 304
E +WL+++ ++Y++LG+ + + GL L PS +
Sbjct: 227 EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLD--- 283
Query: 305 EGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICR 364
+ L EV A E+ W PQ +L HV + H G +TL L GVP +
Sbjct: 284 --VSGLGEVPANVRLES-----WVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSF 334
Query: 365 PCFGD 369
P GD
Sbjct: 335 PWAGD 339
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 430
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 49/132 (37%), Gaps = 29/132 (21%)
Query: 252 SWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLW--VIRPSSNNAPE---- 305
W E V+ VSLGS +KQP + +R + N P
Sbjct: 224 GWQRPAGAEKVVLVSLGSA----------------FTKQPAFYRECVR-AFGNLPGWHLV 266
Query: 306 ---GIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMI 362
G + P L E + +N + W PQ +L + F +H G + E L PMI
Sbjct: 267 LQIGRKVTPAELGE-LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMI 323
Query: 363 CRPCFGDQRVNA 374
P DQ NA
Sbjct: 324 AVPQAVDQFGNA 335
>pdb|4G2T|A Chain A, Crystal Structure Of Streptomyces Sp. Sf2575
Glycosyltransferase Ssfs6, Complexed With Thymidine
Diphosphate
Length = 397
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 345 HCGWNSTLECLCEGVPMICRPCFGDQRVNARYV 377
H G +TL CL EGVP + P + +AR +
Sbjct: 306 HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL 338
>pdb|4FZR|A Chain A, Crystal Structure Of Ssfs6, Streptomyces Sp. Sf2575
Glycosyltransferase
Length = 398
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 345 HCGWNSTLECLCEGVPMICRPCFGDQRVNARYV 377
H G +TL CL EGVP + P + +AR +
Sbjct: 307 HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL 339
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,055,534
Number of Sequences: 62578
Number of extensions: 510617
Number of successful extensions: 897
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 869
Number of HSP's gapped (non-prelim): 15
length of query: 445
length of database: 14,973,337
effective HSP length: 102
effective length of query: 343
effective length of database: 8,590,381
effective search space: 2946500683
effective search space used: 2946500683
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)