Query 013342
Match_columns 445
No_of_seqs 134 out of 1425
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 02:52:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013342.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013342hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 2.7E-68 5.9E-73 521.5 46.5 434 1-444 10-448 (451)
2 PLN02555 limonoid glucosyltran 100.0 5.3E-65 1.1E-69 500.0 43.4 429 1-444 10-467 (480)
3 PLN02562 UDP-glycosyltransfera 100.0 2.6E-64 5.7E-69 494.9 43.1 422 1-444 9-447 (448)
4 PLN02173 UDP-glucosyl transfer 100.0 3.2E-64 6.8E-69 490.5 42.6 415 1-444 8-446 (449)
5 PLN02670 transferase, transfer 100.0 7.3E-64 1.6E-68 490.2 40.0 425 1-444 9-463 (472)
6 PLN02448 UDP-glycosyltransfera 100.0 1E-63 2.2E-68 494.5 41.5 422 1-445 13-456 (459)
7 PLN02207 UDP-glycosyltransfera 100.0 4.1E-63 8.8E-68 484.4 44.2 432 1-444 6-463 (468)
8 PLN02992 coniferyl-alcohol glu 100.0 2.3E-63 5E-68 487.0 42.4 422 1-444 8-467 (481)
9 PLN02210 UDP-glucosyl transfer 100.0 3.4E-63 7.4E-68 487.5 42.2 420 1-445 11-454 (456)
10 PLN02152 indole-3-acetate beta 100.0 1.1E-62 2.3E-67 480.6 42.5 421 1-445 6-455 (455)
11 PLN02863 UDP-glucoronosyl/UDP- 100.0 3.7E-62 7.9E-67 481.5 43.2 431 1-444 12-469 (477)
12 PLN03004 UDP-glycosyltransfera 100.0 2.9E-62 6.3E-67 477.0 40.1 419 1-435 6-450 (451)
13 PLN03015 UDP-glucosyl transfer 100.0 7.5E-62 1.6E-66 473.6 42.7 425 1-444 6-466 (470)
14 PLN00164 glucosyltransferase; 100.0 7.5E-62 1.6E-66 480.9 43.4 427 1-444 6-471 (480)
15 PLN02554 UDP-glycosyltransfera 100.0 1.8E-61 4E-66 480.0 42.9 428 1-444 5-476 (481)
16 PLN02534 UDP-glycosyltransfera 100.0 1.7E-61 3.7E-66 475.7 41.2 427 1-444 11-484 (491)
17 PLN03007 UDP-glucosyltransfera 100.0 3.6E-61 7.8E-66 478.6 42.9 427 1-444 8-478 (482)
18 PLN02208 glycosyltransferase f 100.0 3.8E-61 8.3E-66 469.9 40.4 408 1-444 7-437 (442)
19 PLN02764 glycosyltransferase f 100.0 8.8E-61 1.9E-65 464.7 40.9 408 1-444 8-443 (453)
20 PLN02167 UDP-glycosyltransfera 100.0 2.1E-60 4.5E-65 471.8 42.9 434 1-444 6-470 (475)
21 PLN00414 glycosyltransferase f 100.0 1.4E-60 3E-65 466.5 40.1 408 1-444 7-438 (446)
22 PHA03392 egt ecdysteroid UDP-g 100.0 6E-51 1.3E-55 405.9 27.7 386 3-426 26-449 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 3.6E-52 7.7E-57 421.6 -0.4 385 1-426 3-426 (500)
24 TIGR01426 MGT glycosyltransfer 100.0 2.4E-44 5.2E-49 353.3 27.6 375 4-442 1-388 (392)
25 cd03784 GT1_Gtf_like This fami 100.0 2.7E-42 5.9E-47 340.2 24.9 373 1-443 3-400 (401)
26 KOG1192 UDP-glucuronosyl and U 100.0 3.5E-41 7.6E-46 341.4 22.4 388 1-425 8-438 (496)
27 COG1819 Glycosyl transferases, 100.0 1.5E-41 3.2E-46 329.8 15.7 383 1-443 4-397 (406)
28 PRK12446 undecaprenyldiphospho 99.9 3.1E-25 6.7E-30 212.9 27.1 316 1-418 4-335 (352)
29 PF13528 Glyco_trans_1_3: Glyc 99.9 1.3E-23 2.8E-28 200.7 20.8 299 2-403 4-317 (318)
30 COG0707 MurG UDP-N-acetylgluco 99.9 3.4E-22 7.3E-27 189.7 25.9 319 1-426 3-338 (357)
31 TIGR00661 MJ1255 conserved hyp 99.9 1.2E-21 2.6E-26 186.8 20.8 127 259-413 187-318 (321)
32 PRK00726 murG undecaprenyldiph 99.8 4.4E-18 9.5E-23 165.2 26.0 337 1-443 4-354 (357)
33 cd03785 GT1_MurG MurG is an N- 99.8 1.3E-17 2.9E-22 161.4 26.8 323 1-426 2-338 (350)
34 TIGR01133 murG undecaprenyldip 99.7 1.7E-15 3.7E-20 146.5 27.6 317 1-426 3-335 (348)
35 COG4671 Predicted glycosyl tra 99.7 7.8E-15 1.7E-19 133.0 21.5 328 2-405 13-364 (400)
36 TIGR00215 lpxB lipid-A-disacch 99.7 1.5E-15 3.2E-20 148.1 18.3 345 1-442 8-384 (385)
37 PRK13609 diacylglycerol glucos 99.6 2.7E-14 5.8E-19 139.9 18.7 162 258-442 200-367 (380)
38 TIGR03590 PseG pseudaminic aci 99.6 1.2E-13 2.7E-18 128.5 17.6 104 260-376 170-278 (279)
39 PF04101 Glyco_tran_28_C: Glyc 99.5 2.6E-16 5.7E-21 135.4 -2.5 135 262-406 1-144 (167)
40 PRK00025 lpxB lipid-A-disaccha 99.5 1.5E-12 3.2E-17 127.6 20.0 105 330-442 255-373 (380)
41 PRK13608 diacylglycerol glucos 99.5 6E-12 1.3E-16 123.4 19.8 147 258-426 200-352 (391)
42 PLN02605 monogalactosyldiacylg 99.4 2.3E-11 5E-16 119.1 23.6 96 320-426 265-362 (382)
43 TIGR03492 conserved hypothetic 99.4 1.9E-10 4.1E-15 112.5 27.8 328 8-417 6-372 (396)
44 cd03814 GT1_like_2 This family 99.4 7.5E-10 1.6E-14 107.1 31.5 334 9-443 14-362 (364)
45 cd03818 GT1_ExpC_like This fam 99.3 1.9E-08 4.1E-13 99.2 32.3 80 319-406 280-366 (396)
46 cd03823 GT1_ExpE7_like This fa 99.3 1.1E-08 2.5E-13 98.5 29.5 130 259-406 189-329 (359)
47 PLN02871 UDP-sulfoquinovose:DA 99.3 3.1E-08 6.7E-13 99.7 33.5 127 261-407 263-401 (465)
48 cd03800 GT1_Sucrose_synthase T 99.3 1.4E-08 3E-13 99.9 30.0 322 9-406 21-368 (398)
49 PF03033 Glyco_transf_28: Glyc 99.2 1.8E-12 3.9E-17 107.8 1.3 129 1-134 1-133 (139)
50 cd03817 GT1_UGDG_like This fam 99.2 3.9E-08 8.5E-13 95.1 30.0 80 319-407 258-344 (374)
51 cd03801 GT1_YqgM_like This fam 99.2 8.2E-08 1.8E-12 92.3 31.8 335 9-443 14-372 (374)
52 cd03794 GT1_wbuB_like This fam 99.2 2.1E-08 4.6E-13 97.5 27.2 315 9-406 14-365 (394)
53 cd03816 GT1_ALG1_like This fam 99.2 3.6E-08 7.8E-13 97.6 28.4 128 259-406 230-381 (415)
54 TIGR03449 mycothiol_MshA UDP-N 99.2 2.8E-08 6.1E-13 98.2 27.4 323 9-406 20-368 (405)
55 cd03808 GT1_cap1E_like This fa 99.2 1.6E-07 3.4E-12 90.2 31.3 313 1-407 2-330 (359)
56 cd04962 GT1_like_5 This family 99.1 6.2E-08 1.3E-12 94.4 28.4 131 260-406 196-336 (371)
57 PRK10307 putative glycosyl tra 99.1 6.2E-07 1.4E-11 88.8 32.6 144 259-418 227-386 (412)
58 cd03798 GT1_wlbH_like This fam 99.1 4.8E-07 1E-11 87.2 31.0 184 194-407 145-345 (377)
59 PRK05749 3-deoxy-D-manno-octul 99.0 1.1E-06 2.4E-11 87.5 29.6 111 321-443 303-419 (425)
60 cd03820 GT1_amsD_like This fam 99.0 1.1E-06 2.5E-11 83.8 28.5 88 320-418 235-328 (348)
61 cd05844 GT1_like_7 Glycosyltra 99.0 5.1E-07 1.1E-11 87.8 26.2 80 319-406 244-336 (367)
62 TIGR02472 sucr_P_syn_N sucrose 99.0 2.4E-06 5.2E-11 85.3 31.4 161 261-442 248-436 (439)
63 cd03795 GT1_like_4 This family 99.0 9.6E-07 2.1E-11 85.3 27.8 131 260-407 190-333 (357)
64 cd03786 GT1_UDP-GlcNAc_2-Epime 99.0 2.6E-08 5.6E-13 96.9 16.5 135 258-406 196-337 (363)
65 cd03796 GT1_PIG-A_like This fa 98.9 3.1E-06 6.7E-11 83.5 30.6 78 319-406 249-333 (398)
66 cd03819 GT1_WavL_like This fam 98.9 9.2E-07 2E-11 85.5 26.0 79 319-405 245-329 (355)
67 cd03821 GT1_Bme6_like This fam 98.9 4.7E-06 1E-10 80.5 30.7 132 259-406 201-345 (375)
68 TIGR02468 sucrsPsyn_pln sucros 98.9 8.2E-06 1.8E-10 86.9 33.1 145 249-406 469-637 (1050)
69 COG3980 spsG Spore coat polysa 98.9 1.7E-07 3.7E-12 83.3 16.7 142 260-418 158-302 (318)
70 cd03822 GT1_ecORF704_like This 98.9 4E-06 8.7E-11 81.0 28.3 108 319-442 246-363 (366)
71 cd03805 GT1_ALG2_like This fam 98.9 4.2E-06 9.1E-11 82.2 28.6 80 319-407 279-365 (392)
72 PF04007 DUF354: Protein of un 98.8 8.2E-07 1.8E-11 83.9 20.8 291 10-405 11-309 (335)
73 cd04955 GT1_like_6 This family 98.8 1.2E-05 2.6E-10 77.9 29.3 153 264-442 196-360 (363)
74 KOG3349 Predicted glycosyltran 98.8 2.7E-08 5.8E-13 79.5 7.9 119 261-389 4-134 (170)
75 PLN02275 transferase, transfer 98.8 3.2E-05 7E-10 75.5 30.5 75 320-404 286-371 (371)
76 cd03825 GT1_wcfI_like This fam 98.7 1.7E-05 3.6E-10 76.9 27.7 82 318-407 242-331 (365)
77 cd03807 GT1_WbnK_like This fam 98.7 1.8E-05 3.8E-10 76.1 27.8 107 320-442 251-362 (365)
78 cd04951 GT1_WbdM_like This fam 98.7 1.6E-05 3.5E-10 76.8 27.5 143 259-425 186-343 (360)
79 cd03806 GT1_ALG11_like This fa 98.7 9.6E-06 2.1E-10 80.4 25.8 81 318-407 303-393 (419)
80 TIGR03087 stp1 sugar transfera 98.7 1E-05 2.2E-10 79.8 25.9 78 319-406 279-362 (397)
81 cd03811 GT1_WabH_like This fam 98.7 1.8E-05 3.8E-10 75.6 26.3 133 259-406 187-332 (353)
82 TIGR00236 wecB UDP-N-acetylglu 98.7 1E-06 2.3E-11 85.8 17.5 135 260-416 197-341 (365)
83 PRK09922 UDP-D-galactose:(gluc 98.7 4.1E-06 8.9E-11 81.4 21.3 131 261-407 180-325 (359)
84 cd03799 GT1_amsK_like This is 98.6 5.5E-05 1.2E-09 72.9 28.0 81 319-407 235-328 (355)
85 cd03809 GT1_mtfB_like This fam 98.6 1E-05 2.2E-10 78.2 22.5 88 318-418 251-345 (365)
86 cd03802 GT1_AviGT4_like This f 98.6 1.6E-05 3.5E-10 76.0 23.6 151 262-442 172-332 (335)
87 TIGR02149 glgA_Coryne glycogen 98.5 0.00012 2.6E-09 71.8 27.7 132 260-406 200-352 (388)
88 TIGR03088 stp2 sugar transfera 98.5 0.00012 2.6E-09 71.5 27.2 79 320-406 255-338 (374)
89 PRK14089 ipid-A-disaccharide s 98.5 1.6E-06 3.4E-11 82.6 12.8 157 260-441 167-345 (347)
90 PLN00142 sucrose synthase 98.5 0.00011 2.4E-09 76.9 26.4 77 320-404 642-730 (815)
91 cd03804 GT1_wbaZ_like This fam 98.5 1.1E-05 2.4E-10 78.1 18.3 173 193-407 149-327 (351)
92 TIGR02470 sucr_synth sucrose s 98.4 0.00099 2.1E-08 69.8 32.4 78 319-404 618-707 (784)
93 PLN02949 transferase, transfer 98.4 0.00027 5.9E-09 70.6 26.6 98 319-424 334-442 (463)
94 cd03812 GT1_CapH_like This fam 98.4 0.00012 2.7E-09 70.6 23.2 80 319-407 248-332 (358)
95 TIGR03568 NeuC_NnaA UDP-N-acet 98.4 1.3E-05 2.9E-10 77.7 15.7 130 259-405 200-338 (365)
96 PF02350 Epimerase_2: UDP-N-ac 98.3 5.2E-06 1.1E-10 79.7 12.2 139 258-417 178-326 (346)
97 cd03792 GT1_Trehalose_phosphor 98.3 0.00023 5E-09 69.4 23.6 78 319-406 251-337 (372)
98 PRK15179 Vi polysaccharide bio 98.1 0.0063 1.4E-07 63.6 29.9 143 260-420 516-674 (694)
99 COG1519 KdtA 3-deoxy-D-manno-o 98.1 0.0033 7.1E-08 60.2 25.0 299 6-406 56-386 (419)
100 TIGR02918 accessory Sec system 98.1 0.00096 2.1E-08 67.5 23.0 161 261-443 319-499 (500)
101 COG5017 Uncharacterized conser 98.1 2.3E-05 4.9E-10 61.8 8.6 123 263-404 2-140 (161)
102 cd04950 GT1_like_1 Glycosyltra 98.1 0.006 1.3E-07 59.6 27.4 76 319-406 253-340 (373)
103 cd04946 GT1_AmsK_like This fam 98.1 0.00014 3E-09 71.9 15.9 161 260-441 229-406 (407)
104 PRK15427 colanic acid biosynth 98.0 0.00021 4.5E-09 70.6 16.7 129 260-406 221-371 (406)
105 cd03813 GT1_like_3 This family 98.0 0.0019 4E-08 65.3 23.2 133 260-406 292-442 (475)
106 PRK00654 glgA glycogen synthas 98.0 0.0018 4E-08 65.2 22.9 132 260-405 281-427 (466)
107 PRK15484 lipopolysaccharide 1, 98.0 0.00048 1E-08 67.4 17.6 82 318-406 255-344 (380)
108 PF00534 Glycos_transf_1: Glyc 97.9 0.0002 4.3E-09 61.5 12.3 133 258-406 12-158 (172)
109 PF02684 LpxB: Lipid-A-disacch 97.9 0.0021 4.5E-08 62.0 20.1 191 221-435 151-366 (373)
110 cd03791 GT1_Glycogen_synthase_ 97.9 0.0037 8.1E-08 63.2 23.3 130 259-406 294-442 (476)
111 PLN02846 digalactosyldiacylgly 97.9 0.013 2.9E-07 58.1 25.7 123 263-407 230-364 (462)
112 PRK01021 lpxB lipid-A-disaccha 97.8 0.0073 1.6E-07 61.1 23.2 195 221-441 379-600 (608)
113 PF13844 Glyco_transf_41: Glyc 97.8 0.00048 1E-08 67.7 14.4 136 258-406 282-430 (468)
114 PLN02316 synthase/transferase 97.8 0.032 6.9E-07 60.4 28.9 161 262-440 841-1027(1036)
115 cd04949 GT1_gtfA_like This fam 97.7 0.0045 9.7E-08 60.3 20.0 98 319-421 260-361 (372)
116 PRK10125 putative glycosyl tra 97.5 0.092 2E-06 51.8 25.5 116 262-401 242-366 (405)
117 COG0381 WecB UDP-N-acetylgluco 97.5 0.0019 4.1E-08 61.2 12.4 137 258-414 202-346 (383)
118 COG0763 LpxB Lipid A disacchar 97.4 0.026 5.6E-07 53.6 19.3 200 221-443 154-378 (381)
119 COG1817 Uncharacterized protei 97.4 0.073 1.6E-06 48.9 21.0 104 8-132 9-114 (346)
120 PRK09814 beta-1,6-galactofuran 97.4 0.001 2.2E-08 63.8 9.7 111 318-442 205-331 (333)
121 PLN02501 digalactosyldiacylgly 97.4 0.093 2E-06 54.1 23.5 122 262-407 549-682 (794)
122 PF13692 Glyco_trans_1_4: Glyc 97.4 0.00054 1.2E-08 56.1 6.5 80 319-406 52-135 (135)
123 KOG4626 O-linked N-acetylgluco 97.0 0.0081 1.8E-07 59.7 11.1 141 258-406 756-904 (966)
124 TIGR02095 glgA glycogen/starch 96.6 0.03 6.4E-07 56.6 12.6 128 260-405 290-436 (473)
125 PRK14098 glycogen synthase; Pr 96.5 0.037 8E-07 56.0 12.6 133 260-404 306-449 (489)
126 PHA01633 putative glycosyl tra 96.5 0.043 9.3E-07 52.3 12.1 129 260-406 147-307 (335)
127 PRK15490 Vi polysaccharide bio 96.4 0.075 1.6E-06 53.7 13.4 74 319-400 454-532 (578)
128 PRK10017 colanic acid biosynth 96.3 0.13 2.9E-06 50.8 14.7 177 251-443 225-421 (426)
129 PF06722 DUF1205: Protein of u 96.3 0.0054 1.2E-07 46.8 3.9 52 248-299 28-84 (97)
130 TIGR02400 trehalose_OtsA alpha 96.2 0.14 3.1E-06 51.2 14.7 102 326-444 342-454 (456)
131 PF13524 Glyco_trans_1_2: Glyc 96.1 0.055 1.2E-06 40.8 8.6 83 345-442 9-92 (92)
132 COG3914 Spy Predicted O-linked 95.9 0.13 2.9E-06 51.1 12.1 105 257-371 426-542 (620)
133 TIGR02193 heptsyl_trn_I lipopo 95.6 0.92 2E-05 43.1 17.0 131 259-404 178-319 (319)
134 PF13477 Glyco_trans_4_2: Glyc 95.6 0.097 2.1E-06 42.8 9.0 100 1-128 2-105 (139)
135 cd03788 GT1_TPS Trehalose-6-Ph 95.6 0.19 4E-06 50.6 12.7 103 325-444 346-459 (460)
136 PHA01630 putative group 1 glyc 94.6 1.3 2.7E-05 42.5 14.4 76 326-406 196-294 (331)
137 PF12000 Glyco_trans_4_3: Gkyc 94.5 0.48 1E-05 40.3 10.1 94 24-130 1-96 (171)
138 PF13579 Glyco_trans_4_4: Glyc 94.5 0.039 8.5E-07 45.9 3.7 94 14-129 6-103 (160)
139 PF06258 Mito_fiss_Elm1: Mitoc 94.1 1.1 2.4E-05 42.4 12.7 58 329-388 221-281 (311)
140 COG4370 Uncharacterized protei 94.1 0.21 4.5E-06 45.7 7.4 110 320-441 294-408 (412)
141 PLN02939 transferase, transfer 93.6 2.1 4.5E-05 46.3 14.8 134 262-405 780-930 (977)
142 PRK14099 glycogen synthase; Pr 93.4 1.3 2.8E-05 44.9 12.6 131 262-406 296-447 (485)
143 PF13439 Glyco_transf_4: Glyco 93.1 1.2 2.6E-05 37.5 10.5 33 8-40 11-43 (177)
144 PLN03063 alpha,alpha-trehalose 92.7 1.6 3.6E-05 46.9 12.8 102 327-444 363-475 (797)
145 PRK10916 ADP-heptose:LPS hepto 92.1 7.2 0.00016 37.5 15.5 101 1-127 3-106 (348)
146 TIGR02201 heptsyl_trn_III lipo 91.8 13 0.00027 35.8 19.2 105 1-128 2-109 (344)
147 cd01635 Glycosyltransferase_GT 91.5 0.92 2E-05 39.9 8.0 50 319-370 160-217 (229)
148 COG0438 RfaG Glycosyltransfera 90.6 14 0.0003 34.3 15.8 79 320-406 257-342 (381)
149 TIGR02919 accessory Sec system 88.9 12 0.00027 37.2 14.0 166 196-406 238-411 (438)
150 PRK14501 putative bifunctional 88.6 5.6 0.00012 42.6 12.2 108 324-444 346-460 (726)
151 PF08660 Alg14: Oligosaccharid 86.6 4 8.6E-05 34.8 7.9 110 4-130 3-129 (170)
152 TIGR03713 acc_sec_asp1 accesso 85.7 4 8.7E-05 41.7 8.7 74 320-406 409-488 (519)
153 PRK06718 precorrin-2 dehydroge 85.5 5.3 0.00012 35.1 8.4 162 253-441 5-180 (202)
154 TIGR02398 gluc_glyc_Psyn gluco 85.2 28 0.00061 35.2 14.2 107 322-444 364-480 (487)
155 cd03793 GT1_Glycogen_synthase_ 84.8 3 6.5E-05 42.6 7.2 75 329-406 467-552 (590)
156 PF04464 Glyphos_transf: CDP-G 84.6 0.61 1.3E-05 45.4 2.2 113 319-441 251-368 (369)
157 PF05159 Capsule_synth: Capsul 81.2 9.1 0.0002 35.3 8.5 43 321-366 184-226 (269)
158 TIGR01470 cysG_Nterm siroheme 80.3 17 0.00037 32.0 9.5 150 253-426 4-165 (205)
159 COG1618 Predicted nucleotide k 76.5 13 0.00029 31.2 7.0 52 1-54 8-60 (179)
160 PRK02797 4-alpha-L-fucosyltran 76.3 35 0.00077 32.0 10.4 81 320-405 206-293 (322)
161 PRK08506 replicative DNA helic 75.3 6.1 0.00013 39.8 5.8 52 1-52 195-251 (472)
162 TIGR02095 glgA glycogen/starch 75.1 12 0.00026 37.8 8.0 24 14-37 22-45 (473)
163 cd03789 GT1_LPS_heptosyltransf 73.8 11 0.00023 35.0 6.8 47 1-47 2-50 (279)
164 KOG0853 Glycosyltransferase [C 72.7 5.1 0.00011 40.0 4.4 61 350-418 381-442 (495)
165 cd02067 B12-binding B12 bindin 72.4 5.1 0.00011 31.7 3.7 35 1-35 2-36 (119)
166 TIGR03600 phage_DnaB phage rep 72.0 9.5 0.00021 37.9 6.3 39 1-39 197-236 (421)
167 TIGR02195 heptsyl_trn_II lipop 71.0 18 0.00038 34.5 7.8 101 1-127 2-105 (334)
168 PRK13932 stationary phase surv 68.8 38 0.00082 31.0 8.8 26 14-40 20-45 (257)
169 PRK05595 replicative DNA helic 68.4 9 0.00019 38.4 5.2 39 1-39 204-243 (444)
170 PF12146 Hydrolase_4: Putative 66.6 9.3 0.0002 27.8 3.7 34 1-34 18-51 (79)
171 PF01075 Glyco_transf_9: Glyco 66.4 8.8 0.00019 34.7 4.4 99 258-364 103-208 (247)
172 cd01635 Glycosyltransferase_GT 66.4 8.7 0.00019 33.5 4.3 26 8-33 12-37 (229)
173 cd07035 TPP_PYR_POX_like Pyrim 65.8 49 0.0011 27.3 8.5 26 341-366 62-93 (155)
174 COG0496 SurE Predicted acid ph 64.1 32 0.00069 31.2 7.3 27 13-40 14-40 (252)
175 PF00731 AIRC: AIR carboxylase 63.7 41 0.00088 28.0 7.3 137 262-426 2-149 (150)
176 PRK06321 replicative DNA helic 63.5 18 0.00038 36.5 6.2 40 1-40 229-269 (472)
177 PF07429 Glyco_transf_56: 4-al 63.4 88 0.0019 29.9 10.2 81 320-405 245-332 (360)
178 PRK06904 replicative DNA helic 63.3 17 0.00036 36.7 6.0 53 1-53 224-282 (472)
179 PRK10422 lipopolysaccharide co 63.1 28 0.00061 33.5 7.5 103 1-127 8-113 (352)
180 PRK10353 3-methyl-adenine DNA 62.8 34 0.00075 29.5 6.9 61 363-426 22-99 (187)
181 PRK08760 replicative DNA helic 62.5 9.8 0.00021 38.4 4.2 40 1-40 232-272 (476)
182 PRK05986 cob(I)alamin adenolsy 62.0 97 0.0021 27.0 9.6 55 1-55 25-85 (191)
183 COG1703 ArgK Putative periplas 60.0 64 0.0014 30.2 8.5 36 3-38 56-91 (323)
184 PRK08006 replicative DNA helic 59.9 35 0.00076 34.4 7.6 53 1-53 227-285 (471)
185 PRK13935 stationary phase surv 58.2 84 0.0018 28.7 9.0 26 14-40 15-40 (253)
186 COG0859 RfaF ADP-heptose:LPS h 57.9 33 0.00073 32.8 6.9 95 260-364 175-276 (334)
187 PRK09165 replicative DNA helic 57.8 25 0.00054 35.8 6.2 40 1-40 220-274 (497)
188 cd07038 TPP_PYR_PDC_IPDC_like 57.3 1.2E+02 0.0025 25.5 9.4 27 340-366 61-93 (162)
189 PRK05562 precorrin-2 dehydroge 56.8 1.2E+02 0.0027 27.0 9.7 146 253-426 20-180 (223)
190 PRK10964 ADP-heptose:LPS hepto 55.9 46 0.001 31.5 7.5 132 260-405 178-321 (322)
191 TIGR00715 precor6x_red precorr 55.8 73 0.0016 29.2 8.3 21 15-35 12-32 (256)
192 cd00561 CobA_CobO_BtuR ATP:cor 55.4 1.3E+02 0.0027 25.4 9.1 55 1-55 5-65 (159)
193 PF06925 MGDG_synth: Monogalac 55.3 24 0.00051 29.9 4.8 22 11-32 1-23 (169)
194 PRK05636 replicative DNA helic 55.0 12 0.00027 37.9 3.5 39 1-39 268-307 (505)
195 PRK02261 methylaspartate mutas 54.5 19 0.00042 29.4 3.9 38 1-38 6-43 (137)
196 PRK08840 replicative DNA helic 53.5 28 0.00061 35.0 5.7 53 1-53 220-278 (464)
197 PF00289 CPSase_L_chain: Carba 53.5 43 0.00092 26.2 5.6 70 276-357 12-91 (110)
198 PF02310 B12-binding: B12 bind 53.4 20 0.00043 28.2 3.8 34 1-34 3-36 (121)
199 PRK00346 surE 5'(3')-nucleotid 53.3 1.1E+02 0.0024 27.9 9.0 26 14-40 15-40 (250)
200 PRK07004 replicative DNA helic 53.0 29 0.00063 34.9 5.7 40 1-40 216-256 (460)
201 PF09314 DUF1972: Domain of un 52.9 28 0.0006 30.1 4.8 40 15-54 23-63 (185)
202 COG2861 Uncharacterized protei 52.8 94 0.002 28.0 8.0 27 101-127 149-178 (250)
203 cd07039 TPP_PYR_POX Pyrimidine 52.6 1.4E+02 0.003 25.1 10.5 26 340-365 65-96 (164)
204 PRK02649 ppnK inorganic polyph 51.4 23 0.00049 33.4 4.4 55 334-406 66-124 (305)
205 PRK13931 stationary phase surv 51.3 1.1E+02 0.0024 28.1 8.7 39 15-53 16-61 (261)
206 PF02951 GSH-S_N: Prokaryotic 50.4 17 0.00036 28.9 2.8 23 13-35 18-40 (119)
207 PF04127 DFP: DNA / pantothena 50.1 17 0.00037 31.4 3.1 30 4-35 23-52 (185)
208 PF06506 PrpR_N: Propionate ca 49.0 14 0.00031 31.6 2.5 69 335-406 33-124 (176)
209 PF02826 2-Hacid_dh_C: D-isome 47.8 82 0.0018 26.9 7.1 102 258-401 35-142 (178)
210 PRK07773 replicative DNA helic 47.4 38 0.00083 37.2 6.0 40 1-40 220-260 (886)
211 PRK05748 replicative DNA helic 47.3 43 0.00092 33.6 5.9 40 1-40 206-246 (448)
212 TIGR00665 DnaB replicative DNA 46.7 39 0.00086 33.6 5.6 40 1-40 198-238 (434)
213 PRK04885 ppnK inorganic polyph 46.7 28 0.00061 32.1 4.1 53 336-406 35-93 (265)
214 PLN02470 acetolactate synthase 46.2 86 0.0019 32.7 8.2 90 266-365 2-109 (585)
215 PRK14077 pnk inorganic polypho 45.1 34 0.00073 32.0 4.4 56 333-406 61-120 (287)
216 PHA02754 hypothetical protein; 45.1 34 0.00073 22.9 3.1 24 400-426 7-30 (67)
217 COG0003 ArsA Predicted ATPase 44.9 1.8E+02 0.0039 27.7 9.3 37 3-39 7-43 (322)
218 PF02441 Flavoprotein: Flavopr 44.8 29 0.00062 27.9 3.5 33 2-35 4-36 (129)
219 PLN03064 alpha,alpha-trehalose 44.0 1.2E+02 0.0026 33.5 8.8 103 326-444 446-559 (934)
220 PRK02155 ppnK NAD(+)/NADH kina 43.7 40 0.00086 31.6 4.7 56 333-406 60-119 (291)
221 PF05225 HTH_psq: helix-turn-h 43.6 31 0.00068 21.9 2.8 26 392-419 1-26 (45)
222 PRK12342 hypothetical protein; 43.2 43 0.00093 30.6 4.7 30 101-130 109-144 (254)
223 PF01975 SurE: Survival protei 43.2 24 0.00053 30.8 3.0 27 14-40 15-41 (196)
224 PRK07710 acetolactate synthase 43.1 74 0.0016 33.0 7.1 27 339-365 79-111 (571)
225 PRK11519 tyrosine kinase; Prov 43.1 4.3E+02 0.0092 28.4 12.9 32 6-37 535-566 (719)
226 COG4088 Predicted nucleotide k 43.0 24 0.00051 31.1 2.8 34 1-34 4-37 (261)
227 PRK03359 putative electron tra 42.3 43 0.00093 30.7 4.6 31 101-131 112-148 (256)
228 PRK01911 ppnK inorganic polyph 42.0 41 0.00088 31.5 4.5 57 332-406 60-120 (292)
229 PRK04940 hypothetical protein; 41.6 53 0.0012 28.2 4.8 32 101-132 60-92 (180)
230 PF08323 Glyco_transf_5: Starc 41.4 21 0.00045 32.5 2.5 22 15-36 22-43 (245)
231 cd02071 MM_CoA_mut_B12_BD meth 41.2 41 0.00089 26.7 3.9 35 1-35 2-36 (122)
232 KOG1250 Threonine/serine dehyd 40.2 1.4E+02 0.0029 29.2 7.5 60 342-407 248-317 (457)
233 TIGR01162 purE phosphoribosyla 40.2 2.2E+02 0.0048 23.8 8.7 18 410-427 131-148 (156)
234 PRK09620 hypothetical protein; 39.6 84 0.0018 28.2 6.0 20 16-35 33-52 (229)
235 cd01425 RPS2 Ribosomal protein 39.6 21 0.00046 31.1 2.1 32 101-132 127-160 (193)
236 PRK03372 ppnK inorganic polyph 39.5 47 0.001 31.3 4.5 56 333-406 69-128 (306)
237 PRK05632 phosphate acetyltrans 39.5 3.8E+02 0.0083 28.6 11.8 95 7-132 12-116 (684)
238 COG2910 Putative NADH-flavin r 39.3 28 0.00062 29.9 2.7 19 16-34 14-32 (211)
239 PRK03378 ppnK inorganic polyph 39.2 44 0.00095 31.3 4.3 57 332-406 59-119 (292)
240 PRK06276 acetolactate synthase 39.2 1.1E+02 0.0024 31.9 7.7 64 340-406 65-148 (586)
241 PRK00048 dihydrodipicolinate r 39.1 1.6E+02 0.0035 26.9 8.0 58 329-389 53-115 (257)
242 PRK13768 GTPase; Provisional 39.0 76 0.0016 29.0 5.8 37 1-37 5-41 (253)
243 COG3563 KpsC Capsule polysacch 38.7 1.4E+02 0.003 29.9 7.4 85 274-366 165-252 (671)
244 TIGR00624 tag DNA-3-methyladen 38.5 1E+02 0.0022 26.5 5.9 61 363-426 21-98 (179)
245 COG0801 FolK 7,8-dihydro-6-hyd 38.5 62 0.0013 27.2 4.6 34 262-295 3-36 (160)
246 cd02070 corrinoid_protein_B12- 38.5 43 0.00094 29.3 4.0 35 1-35 85-119 (201)
247 PRK04539 ppnK inorganic polyph 38.4 45 0.00098 31.3 4.2 56 333-406 65-124 (296)
248 TIGR00708 cobA cob(I)alamin ad 38.3 2.5E+02 0.0055 23.9 8.9 55 1-56 8-68 (173)
249 COG2327 WcaK Polysaccharide py 38.3 98 0.0021 30.1 6.5 70 331-407 280-351 (385)
250 PRK10637 cysG siroheme synthas 38.2 1.4E+02 0.003 30.0 8.0 147 253-426 7-168 (457)
251 PRK05579 bifunctional phosphop 38.0 2.7E+02 0.0059 27.4 9.7 135 260-405 7-182 (399)
252 PLN02929 NADH kinase 37.5 40 0.00087 31.6 3.7 66 335-406 63-137 (301)
253 COG0503 Apt Adenine/guanine ph 37.4 85 0.0018 26.9 5.5 28 101-128 53-82 (179)
254 COG1484 DnaC DNA replication p 37.2 49 0.0011 30.2 4.2 34 1-34 108-141 (254)
255 PF01210 NAD_Gly3P_dh_N: NAD-d 37.0 20 0.00044 29.9 1.6 20 16-35 12-31 (157)
256 PRK13982 bifunctional SbtC-lik 36.9 57 0.0012 32.8 4.9 22 15-36 285-306 (475)
257 TIGR02195 heptsyl_trn_II lipop 36.8 1.3E+02 0.0028 28.5 7.3 96 259-364 173-276 (334)
258 PRK13934 stationary phase surv 36.3 69 0.0015 29.4 4.9 27 13-40 14-40 (266)
259 PRK08305 spoVFB dipicolinate s 36.3 43 0.00093 29.2 3.4 33 4-36 10-43 (196)
260 TIGR00725 conserved hypothetic 36.2 84 0.0018 26.4 5.1 97 250-366 23-123 (159)
261 COG2210 Peroxiredoxin family p 36.1 57 0.0012 26.5 3.8 32 3-34 8-39 (137)
262 COG4394 Uncharacterized protei 36.0 3.2E+02 0.0069 25.5 8.8 110 322-443 240-364 (370)
263 TIGR02370 pyl_corrinoid methyl 35.7 51 0.0011 28.8 3.9 37 1-37 87-123 (197)
264 PRK01231 ppnK inorganic polyph 35.5 62 0.0013 30.4 4.6 54 335-406 61-118 (295)
265 PF02776 TPP_enzyme_N: Thiamin 35.3 1.5E+02 0.0032 25.0 6.7 29 336-366 64-98 (172)
266 PRK11914 diacylglycerol kinase 35.3 1E+02 0.0023 28.9 6.3 29 336-366 64-96 (306)
267 PRK12315 1-deoxy-D-xylulose-5- 35.1 4.1E+02 0.0089 27.7 11.0 52 344-404 524-580 (581)
268 TIGR00347 bioD dethiobiotin sy 35.1 2.6E+02 0.0057 23.1 9.8 28 5-32 5-32 (166)
269 PF01372 Melittin: Melittin; 34.2 7.5 0.00016 20.9 -0.9 17 347-363 1-17 (26)
270 PRK07313 phosphopantothenoylcy 34.1 3E+02 0.0066 23.6 9.3 133 262-405 4-179 (182)
271 PRK15409 bifunctional glyoxyla 33.7 2E+02 0.0042 27.4 7.8 105 258-387 144-262 (323)
272 PRK10964 ADP-heptose:LPS hepto 33.6 89 0.0019 29.5 5.6 48 1-48 3-52 (322)
273 PF13450 NAD_binding_8: NAD(P) 33.5 51 0.0011 23.0 2.9 20 15-34 8-27 (68)
274 PF05014 Nuc_deoxyrib_tr: Nucl 33.5 62 0.0013 25.2 3.7 39 332-370 57-101 (113)
275 COG1154 Dxs Deoxyxylulose-5-ph 33.2 3.8E+02 0.0083 27.8 9.8 113 257-406 499-624 (627)
276 TIGR00118 acolac_lg acetolacta 33.2 1.5E+02 0.0033 30.6 7.6 27 339-365 65-97 (558)
277 cd03789 GT1_LPS_heptosyltransf 32.8 3E+02 0.0065 25.2 8.9 31 331-364 193-223 (279)
278 PRK00784 cobyric acid synthase 32.6 4.2E+02 0.0091 26.9 10.4 28 7-34 12-39 (488)
279 PRK06456 acetolactate synthase 32.3 1.2E+02 0.0026 31.5 6.6 25 341-365 71-101 (572)
280 TIGR00147 lipid kinase, YegS/R 32.2 2E+02 0.0043 26.8 7.6 29 336-366 57-91 (293)
281 PRK06270 homoserine dehydrogen 32.1 3E+02 0.0064 26.4 8.8 58 329-387 80-149 (341)
282 cd01141 TroA_d Periplasmic bin 32.0 73 0.0016 27.2 4.3 29 101-129 69-99 (186)
283 PF07565 Band_3_cyto: Band 3 c 31.8 89 0.0019 28.6 4.9 44 390-444 203-246 (257)
284 PF07355 GRDB: Glycine/sarcosi 31.8 92 0.002 29.8 5.0 27 101-127 80-116 (349)
285 cd02065 B12-binding_like B12 b 31.7 71 0.0015 25.0 3.9 34 1-34 2-35 (125)
286 PRK08322 acetolactate synthase 31.7 1.5E+02 0.0032 30.6 7.2 27 339-365 64-96 (547)
287 COG3245 CycB Cytochrome c5 [En 31.7 46 0.001 26.1 2.5 46 355-402 60-120 (126)
288 PRK08199 thiamine pyrophosphat 31.7 2.4E+02 0.0053 29.1 8.8 64 340-406 73-156 (557)
289 PRK10422 lipopolysaccharide co 31.5 1.9E+02 0.0041 27.7 7.6 98 259-364 182-287 (352)
290 PF06825 HSBP1: Heat shock fac 31.2 41 0.00088 22.5 1.9 46 394-444 2-47 (54)
291 PRK01185 ppnK inorganic polyph 30.7 71 0.0015 29.5 4.1 53 336-406 52-105 (271)
292 PF12363 DUF3647: Phage protei 30.6 1.4E+02 0.0031 23.4 5.3 78 344-441 34-112 (113)
293 PF10933 DUF2827: Protein of u 30.4 2.8E+02 0.0061 26.7 8.0 103 320-443 253-362 (364)
294 cd03114 ArgK-like The function 30.4 3.1E+02 0.0067 22.5 9.0 35 2-36 3-37 (148)
295 TIGR02853 spore_dpaA dipicolin 30.2 3.4E+02 0.0073 25.3 8.6 76 259-355 151-226 (287)
296 COG0299 PurN Folate-dependent 30.2 3.6E+02 0.0079 23.5 7.9 126 261-421 52-186 (200)
297 PF03808 Glyco_tran_WecB: Glyc 29.8 3.4E+02 0.0075 22.9 11.2 85 198-296 49-133 (172)
298 KOG0780 Signal recognition par 29.7 1.9E+02 0.0042 28.2 6.7 50 2-51 105-161 (483)
299 PF08766 DEK_C: DEK C terminal 29.6 1.1E+02 0.0024 20.2 3.9 49 392-443 1-51 (54)
300 cd08783 Death_MALT1 Death doma 29.1 2.5E+02 0.0054 21.2 5.8 36 368-406 20-55 (97)
301 PF10093 DUF2331: Uncharacteri 29.0 1.5E+02 0.0032 28.9 6.0 82 268-362 187-286 (374)
302 COG1797 CobB Cobyrinic acid a, 28.8 56 0.0012 32.2 3.2 27 6-32 9-35 (451)
303 TIGR00087 surE 5'/3'-nucleotid 28.8 1.1E+02 0.0025 27.7 5.0 39 14-53 15-57 (244)
304 PRK07586 hypothetical protein; 28.6 2.2E+02 0.0047 29.1 7.7 24 342-365 68-97 (514)
305 TIGR02852 spore_dpaB dipicolin 28.6 58 0.0013 28.2 3.0 33 3-35 5-37 (187)
306 PRK03501 ppnK inorganic polyph 28.6 84 0.0018 28.9 4.2 54 336-406 39-97 (264)
307 KOG4117 Heat shock factor bind 28.4 1.8E+02 0.0038 20.0 4.5 48 392-444 13-60 (73)
308 COG0052 RpsB Ribosomal protein 28.1 40 0.00087 30.4 1.9 33 101-133 156-190 (252)
309 PRK13054 lipid kinase; Reviewe 28.0 1.8E+02 0.0039 27.2 6.5 30 335-366 55-92 (300)
310 PF08452 DNAP_B_exo_N: DNA pol 27.9 37 0.0008 17.6 1.0 16 250-265 5-20 (22)
311 PF05728 UPF0227: Uncharacteri 27.7 82 0.0018 27.3 3.8 33 103-135 61-94 (187)
312 PRK04761 ppnK inorganic polyph 27.6 39 0.00085 30.7 1.8 28 337-366 26-57 (246)
313 cd01965 Nitrogenase_MoFe_beta_ 27.5 1.1E+02 0.0024 30.4 5.2 26 101-129 371-396 (428)
314 PRK04328 hypothetical protein; 27.5 4.5E+02 0.0098 23.7 8.9 37 2-38 27-63 (249)
315 KOG0541 Alkyl hydroperoxide re 27.5 58 0.0013 27.1 2.6 32 3-34 55-86 (171)
316 TIGR00345 arsA arsenite-activa 27.3 2.1E+02 0.0046 26.6 6.8 24 16-39 3-26 (284)
317 PF03720 UDPG_MGDP_dh_C: UDP-g 27.2 75 0.0016 24.4 3.2 22 13-34 17-38 (106)
318 PRK09219 xanthine phosphoribos 27.0 1.5E+02 0.0032 25.8 5.2 28 101-128 50-79 (189)
319 COG3195 Uncharacterized protei 27.0 2.9E+02 0.0062 23.3 6.5 77 348-425 87-165 (176)
320 PF07894 DUF1669: Protein of u 27.0 1.2E+02 0.0026 28.1 4.8 49 76-131 130-183 (284)
321 PRK06932 glycerate dehydrogena 26.9 2.3E+02 0.005 26.8 7.0 64 258-350 146-209 (314)
322 COG0297 GlgA Glycogen synthase 26.9 6.9E+02 0.015 25.4 14.5 134 260-405 293-441 (487)
323 PF04244 DPRP: Deoxyribodipyri 26.8 63 0.0014 28.9 3.0 24 11-34 47-70 (224)
324 PLN02935 Bifunctional NADH kin 26.7 87 0.0019 31.7 4.1 54 335-406 261-318 (508)
325 PRK06048 acetolactate synthase 26.4 2.4E+02 0.0051 29.2 7.6 26 340-365 72-103 (561)
326 cd02069 methionine_synthase_B1 26.3 88 0.0019 27.7 3.8 34 2-35 92-125 (213)
327 COG2185 Sbm Methylmalonyl-CoA 26.2 75 0.0016 26.1 3.0 34 1-34 15-48 (143)
328 PRK07574 formate dehydrogenase 25.9 5.3E+02 0.011 25.3 9.4 107 258-387 191-310 (385)
329 PRK13604 luxD acyl transferase 25.9 1.1E+02 0.0023 29.0 4.4 31 2-32 40-70 (307)
330 PRK13059 putative lipid kinase 25.9 2.6E+02 0.0056 26.1 7.1 29 336-366 56-90 (295)
331 PRK13337 putative lipid kinase 25.9 2.7E+02 0.0058 26.1 7.3 28 337-366 58-91 (304)
332 COG2818 Tag 3-methyladenine DN 25.8 2.2E+02 0.0048 24.5 5.8 62 362-426 22-100 (188)
333 PF00070 Pyr_redox: Pyridine n 25.7 1E+02 0.0022 22.0 3.5 22 14-35 10-31 (80)
334 PF14359 DUF4406: Domain of un 25.4 1.1E+02 0.0023 23.1 3.5 28 3-30 2-33 (92)
335 PF09334 tRNA-synt_1g: tRNA sy 25.4 54 0.0012 32.2 2.5 32 7-38 14-48 (391)
336 cd06559 Endonuclease_V Endonuc 25.1 86 0.0019 27.7 3.5 29 101-129 93-128 (208)
337 PRK07525 sulfoacetaldehyde ace 25.0 4.5E+02 0.0098 27.4 9.4 27 339-365 69-101 (588)
338 KOG2941 Beta-1,4-mannosyltrans 24.9 6.4E+02 0.014 24.4 23.7 144 258-419 252-423 (444)
339 TIGR03029 EpsG chain length de 24.8 5.3E+02 0.012 23.5 10.8 31 5-35 111-141 (274)
340 TIGR02853 spore_dpaA dipicolin 24.6 1.9E+02 0.0042 27.0 5.9 23 13-35 11-33 (287)
341 TIGR02990 ectoine_eutA ectoine 24.6 2.6E+02 0.0057 25.3 6.6 102 12-134 105-218 (239)
342 PLN02683 pyruvate dehydrogenas 24.6 6.3E+02 0.014 24.4 9.6 16 391-406 337-352 (356)
343 cd00764 Eukaryotic_PFK Phospho 24.2 1.5E+02 0.0031 32.0 5.5 21 15-35 86-106 (762)
344 PRK00207 sulfur transfer compl 23.9 1.4E+02 0.003 24.0 4.2 33 2-34 5-40 (128)
345 PF07905 PucR: Purine cataboli 23.8 3.7E+02 0.0079 21.2 7.1 42 250-295 36-78 (123)
346 COG2109 BtuR ATP:corrinoid ade 23.8 3.6E+02 0.0077 23.5 6.7 95 2-112 32-133 (198)
347 PRK06732 phosphopantothenate-- 23.8 77 0.0017 28.4 3.0 20 15-34 29-48 (229)
348 PF09001 DUF1890: Domain of un 23.7 60 0.0013 26.3 2.0 22 14-35 15-36 (139)
349 PRK02231 ppnK inorganic polyph 23.7 62 0.0013 29.9 2.4 58 330-405 36-97 (272)
350 PF12695 Abhydrolase_5: Alpha/ 23.5 1.5E+02 0.0033 23.5 4.6 32 2-33 2-33 (145)
351 cd01983 Fer4_NifH The Fer4_Nif 23.5 1.5E+02 0.0032 21.4 4.2 32 2-33 3-34 (99)
352 PRK01077 cobyrinic acid a,c-di 23.4 1.5E+02 0.0032 29.8 5.2 28 7-34 13-40 (451)
353 cd00550 ArsA_ATPase Oxyanion-t 23.3 1.2E+02 0.0027 27.6 4.3 37 2-38 4-40 (254)
354 PF06506 PrpR_N: Propionate ca 23.2 96 0.0021 26.4 3.4 110 10-134 17-155 (176)
355 PRK10117 trehalose-6-phosphate 23.2 3.1E+02 0.0067 27.7 7.3 104 326-444 338-451 (474)
356 PRK06466 acetolactate synthase 23.2 3.4E+02 0.0074 28.1 8.1 26 340-365 69-100 (574)
357 COG2159 Predicted metal-depend 23.1 5.2E+02 0.011 24.2 8.5 113 223-354 96-210 (293)
358 cd01421 IMPCH Inosine monophos 23.0 1.7E+02 0.0036 25.4 4.7 42 14-58 12-55 (187)
359 PRK15062 hydrogenase isoenzyme 23.0 2.4E+02 0.0053 27.1 6.2 36 256-292 127-162 (364)
360 KOG0081 GTPase Rab27, small G 22.9 1.6E+02 0.0036 24.6 4.4 34 101-134 124-167 (219)
361 PRK03708 ppnK inorganic polyph 22.9 48 0.001 30.8 1.5 53 336-406 57-112 (277)
362 PF12500 TRSP: TRSP domain C t 22.8 1.7E+02 0.0036 24.5 4.5 30 7-36 64-93 (155)
363 PRK06487 glycerate dehydrogena 22.7 3.1E+02 0.0067 26.0 7.0 63 258-350 147-209 (317)
364 PRK15469 ghrA bifunctional gly 22.7 5.6E+02 0.012 24.2 8.7 71 259-354 136-206 (312)
365 TIGR00421 ubiX_pad polyprenyl 22.6 87 0.0019 27.0 3.0 30 6-36 7-36 (181)
366 PRK05920 aromatic acid decarbo 22.6 1E+02 0.0023 27.1 3.5 29 8-36 12-40 (204)
367 PRK13055 putative lipid kinase 22.4 3.7E+02 0.008 25.6 7.6 29 336-366 59-93 (334)
368 COG2894 MinD Septum formation 22.3 1.2E+02 0.0025 27.2 3.6 38 2-39 5-44 (272)
369 TIGR02113 coaC_strep phosphopa 22.3 1.1E+02 0.0024 26.2 3.6 29 8-36 9-37 (177)
370 COG3660 Predicted nucleoside-d 22.3 6.3E+02 0.014 23.4 13.3 37 326-364 234-271 (329)
371 cd08194 Fe-ADH6 Iron-containin 22.3 2.8E+02 0.0061 26.9 6.9 10 358-367 122-131 (375)
372 TIGR01012 Sa_S2_E_A ribosomal 22.2 1.1E+02 0.0023 26.8 3.4 32 101-132 108-141 (196)
373 PRK00090 bioD dithiobiotin syn 22.2 5.3E+02 0.012 22.5 10.9 27 7-33 9-35 (222)
374 TIGR01917 gly_red_sel_B glycin 22.2 1.6E+02 0.0035 29.0 4.9 48 71-127 55-112 (431)
375 TIGR01918 various_sel_PB selen 22.0 1.6E+02 0.0036 28.9 4.9 28 101-128 76-113 (431)
376 PRK03094 hypothetical protein; 22.0 82 0.0018 23.0 2.2 20 15-34 10-29 (80)
377 PF14626 RNase_Zc3h12a_2: Zc3h 22.0 88 0.0019 24.7 2.5 29 12-40 9-37 (122)
378 COG0162 TyrS Tyrosyl-tRNA synt 21.9 1E+02 0.0022 30.2 3.6 28 7-35 46-73 (401)
379 PF02780 Transketolase_C: Tran 21.8 1.3E+02 0.0029 23.6 3.8 31 2-34 13-43 (124)
380 PRK08155 acetolactate synthase 21.7 3.4E+02 0.0074 28.1 7.7 90 266-365 3-109 (564)
381 KOG3062 RNA polymerase II elon 21.7 1.4E+02 0.0031 26.7 4.0 28 1-28 4-31 (281)
382 cd06533 Glyco_transf_WecG_TagA 21.6 5E+02 0.011 21.9 11.5 86 198-297 47-132 (171)
383 PRK08410 2-hydroxyacid dehydro 21.5 4.1E+02 0.0089 25.1 7.6 64 258-349 144-207 (311)
384 PRK14076 pnk inorganic polypho 21.5 1.1E+02 0.0024 31.7 4.1 53 336-406 348-404 (569)
385 PRK02645 ppnK inorganic polyph 21.4 61 0.0013 30.6 2.0 29 336-366 57-89 (305)
386 PRK08674 bifunctional phosphog 21.4 7.1E+02 0.015 23.7 9.8 55 2-56 81-135 (337)
387 PRK07313 phosphopantothenoylcy 21.4 95 0.0021 26.7 3.0 33 3-36 6-38 (182)
388 COG1052 LdhA Lactate dehydroge 21.4 4.7E+02 0.01 24.9 7.9 66 259-349 146-211 (324)
389 cd08551 Fe-ADH iron-containing 21.4 3.2E+02 0.007 26.4 7.1 11 358-368 122-132 (370)
390 PRK08617 acetolactate synthase 21.2 2.9E+02 0.0062 28.5 7.0 26 340-365 69-100 (552)
391 PF00982 Glyco_transf_20: Glyc 21.1 3.1E+02 0.0067 27.7 7.0 104 326-444 359-472 (474)
392 cd01452 VWA_26S_proteasome_sub 21.1 4.3E+02 0.0093 22.9 6.9 33 2-34 112-144 (187)
393 TIGR00313 cobQ cobyric acid sy 21.0 8.7E+02 0.019 24.5 11.9 29 7-35 8-36 (475)
394 PF03698 UPF0180: Uncharacteri 21.0 86 0.0019 22.9 2.2 21 15-35 10-30 (80)
395 cd08181 PPD-like 1,3-propanedi 20.9 1.9E+02 0.0041 27.9 5.3 10 358-367 124-133 (357)
396 COG4566 TtrR Response regulato 20.8 4.3E+02 0.0093 23.0 6.6 50 355-406 73-122 (202)
397 cd01976 Nitrogenase_MoFe_alpha 20.8 1.2E+02 0.0026 30.1 4.0 26 101-129 369-394 (421)
398 PF01497 Peripla_BP_2: Peripla 20.8 1.4E+02 0.003 26.4 4.2 32 101-132 60-93 (238)
399 PLN02948 phosphoribosylaminoim 20.7 7.9E+02 0.017 25.6 10.0 143 259-429 409-562 (577)
400 PF01555 N6_N4_Mtase: DNA meth 20.7 1.4E+02 0.0031 26.0 4.2 45 83-134 179-225 (231)
401 PF07015 VirC1: VirC1 protein; 20.6 2.1E+02 0.0046 25.7 5.0 34 7-40 11-44 (231)
402 PRK13011 formyltetrahydrofolat 20.5 6.8E+02 0.015 23.3 8.7 70 345-421 201-272 (286)
403 KOG1111 N-acetylglucosaminyltr 20.5 8E+02 0.017 23.9 11.4 46 317-364 249-301 (426)
404 cd04299 GT1_Glycogen_Phosphory 20.5 5.7E+02 0.012 27.8 9.0 116 319-444 546-687 (778)
405 cd01840 SGNH_hydrolase_yrhL_li 20.4 2E+02 0.0044 23.5 4.7 39 259-298 50-88 (150)
406 PF05693 Glycogen_syn: Glycoge 20.4 87 0.0019 32.4 2.9 94 329-423 462-566 (633)
407 cd01147 HemV-2 Metal binding p 20.2 1.6E+02 0.0035 26.6 4.5 31 101-131 74-107 (262)
408 PRK06436 glycerate dehydrogena 20.2 4E+02 0.0086 25.1 7.1 65 258-350 121-185 (303)
409 PF00282 Pyridoxal_deC: Pyrido 20.1 1.1E+02 0.0024 29.7 3.6 66 339-406 104-191 (373)
410 PF01695 IstB_IS21: IstB-like 20.0 1.3E+02 0.0029 25.6 3.7 33 2-34 51-83 (178)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.7e-68 Score=521.51 Aligned_cols=434 Identities=49% Similarity=0.851 Sum_probs=345.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCC-CCCCCceEEEcCCCCCCCCCCC-Ch-hHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNP-SNHPEFNFQSIPDGLTADDVST-GI-NILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~~~~~~~ 77 (445)
|+++|+|++||++|++.||+.|+.+|+.|||++++.+.... ....++++..+|+++|++.... .. .++. .+...+
T Consensus 10 VvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~~~~~~~~i~~~~ip~glp~~~~~~~~~~~~~~--~~~~~~ 87 (451)
T PLN02410 10 VVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSPSDDFTDFQFVTIPESLPESDFKNLGPIEFLH--KLNKEC 87 (451)
T ss_pred EEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccccccCCCCeEEEeCCCCCCcccccccCHHHHHH--HHHHHh
Confidence 58999999999999999999999999999999998765321 1224699999998887643222 34 5555 565677
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCC-CCCCCC
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGS-SPLQDP 156 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~ 156 (445)
...+.++++.+..+.. . +++|||+|.+..|+..+|+++|||.+.+++++++....+.+.+.....+. .|....
T Consensus 88 ~~~~~~~L~~l~~~~~-----~-p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~ 161 (451)
T PLN02410 88 QVSFKDCLGQLVLQQG-----N-EIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEP 161 (451)
T ss_pred HHHHHHHHHHHHhccC-----C-CcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCcccc
Confidence 7778888877653222 2 67999999999999999999999999999999998877665433222111 121110
Q ss_pred -CCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCC
Q 013342 157 -NKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFA 235 (445)
Q Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~ 235 (445)
......+|+++.++..+++.............+.......+++.+++|||.+||+..++.++..+++++++|||++...
T Consensus 162 ~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~ 241 (451)
T PLN02410 162 KGQQNELVPEFHPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVA 241 (451)
T ss_pred ccCccccCCCCCCCChHHCcchhcCCcHHHHHHHHHHhhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEeccccccc
Confidence 1112247777777777777543222222233332222346789999999999999999999887767899999998643
Q ss_pred CCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHH
Q 013342 236 PFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLA 315 (445)
Q Consensus 236 ~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 315 (445)
.. +....+.+.++.+|||++++++||||||||...++.+++++++.||+.++++|||+++.+...+.++...+|++|+
T Consensus 242 ~~--~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~ 319 (451)
T PLN02410 242 SA--PTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFS 319 (451)
T ss_pred CC--CccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHH
Confidence 21 0111233446899999988899999999999999999999999999999999999998542222222234899999
Q ss_pred HHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHH
Q 013342 316 EAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREV 395 (445)
Q Consensus 316 ~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~ 395 (445)
++.++|+++++|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||+|+.+...+++++
T Consensus 320 er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 399 (451)
T PLN02410 320 KIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGA 399 (451)
T ss_pred HhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999874699999977889999
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 396 VEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 396 l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
|+++|+++|+|++|+.|+++|++|++++++++.+||++.+++++|++.+
T Consensus 400 v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~ 448 (451)
T PLN02410 400 VERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFM 448 (451)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 9999999999877889999999999999999999999999999999986
No 2
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=5.3e-65 Score=499.97 Aligned_cols=429 Identities=31% Similarity=0.579 Sum_probs=339.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----------C---CCCceEEEcCCCCCCCCCCC-Ch-
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPS----------N---HPEFNFQSIPDGLTADDVST-GI- 65 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~----------~---~~~~~~~~l~~~~~~~~~~~-~~- 65 (445)
|+++|+|++||++|++.||+.|+.+|..|||++++.+...+. . ...+.|..+|+++|++.+.. ++
T Consensus 10 Vv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~~~~~~~~~~ 89 (480)
T PLN02555 10 VMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAEDDPRRQDLD 89 (480)
T ss_pred EEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCCCcccccCHH
Confidence 689999999999999999999999999999999986543211 0 11367777888777654333 55
Q ss_pred hHHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhh
Q 013342 66 NILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHL 145 (445)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 145 (445)
.++. .+...+...+.++++++.... . +++|||+|.+..|+..+|+++|||.+.+++++++....+.+.+.
T Consensus 90 ~~~~--~~~~~~~~~l~~~l~~~~~~~------~-pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~- 159 (480)
T PLN02555 90 LYLP--QLELVGKREIPNLVKRYAEQG------R-PVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYH- 159 (480)
T ss_pred HHHH--HHHHhhhHHHHHHHHHHhccC------C-CceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhh-
Confidence 5666 565567788888887764322 1 45999999999999999999999999999999998887766422
Q ss_pred hhcCCCCCCCC--CCCCcCCCCCCCCCCCCCCCcccc--cchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhc
Q 013342 146 EEEGSSPLQDP--NKLQDPVPGLHPLRFKDLPTYRHE--IMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQ 220 (445)
Q Consensus 146 ~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~ 220 (445)
+..+.... ......+|+++.++..+++.+... ......+.+.+ +....+++.+++|||.+||...++.++..
T Consensus 160 ---~~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~ 236 (480)
T PLN02555 160 ---GLVPFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKL 236 (480)
T ss_pred ---cCCCcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhC
Confidence 11121110 111224788877888888875432 23333444444 55667789999999999999999888764
Q ss_pred cCCCceeeccCCCCCCC---CCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEEC
Q 013342 221 CQVPIFPIGPFHKFAPF---STSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIR 297 (445)
Q Consensus 221 ~~~~~~~vGp~~~~~~~---~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~ 297 (445)
. +++.|||+...... ......+..+++|.+||+.++++++|||||||+..++.+++.+++.+|+..+++|||+++
T Consensus 237 ~--~v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~ 314 (480)
T PLN02555 237 C--PIKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMR 314 (480)
T ss_pred C--CEEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEe
Confidence 4 49999999753211 000111334557999999888889999999999999999999999999999999999997
Q ss_pred CCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHH
Q 013342 298 PSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYV 377 (445)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v 377 (445)
.....+....+.+|+++.++.++|+++++|+||.+||.|+++++|||||||||++||+++|||||++|+++||+.||+++
T Consensus 315 ~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~ 394 (480)
T PLN02555 315 PPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYL 394 (480)
T ss_pred cCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHH
Confidence 43111001113478889888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhheeeeEeC-----c-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 378 SHVWRTGLELE-----N-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 378 ~~~~G~g~~~~-----~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
++.||+|+.+. . .++.++|+++|+++|++++|+.+|+||++|++++++++.+||++.+++++||+++
T Consensus 395 ~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i 467 (480)
T PLN02555 395 VDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKL 467 (480)
T ss_pred HHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 87579999993 3 6899999999999999888899999999999999999999999999999999986
No 3
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=2.6e-64 Score=494.91 Aligned_cols=422 Identities=28% Similarity=0.457 Sum_probs=330.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCC----CCCCCceEEEcCCCCCCCCCCCCh-hHHHHHHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNP----SNHPEFNFQSIPDGLTADDVSTGI-NILITNLLNV 75 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~ 75 (445)
|+++|+|++||++|++.||+.|+.+|++|||++++.+.... ...+++.++.+|++.+++. ..++ .++. .+..
T Consensus 9 VVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~lp~g~~~~~-~~~~~~l~~--a~~~ 85 (448)
T PLN02562 9 IILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSISDGQDDDP-PRDFFSIEN--SMEN 85 (448)
T ss_pred EEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCCCCCEEEEECCCCCCCCc-cccHHHHHH--HHHH
Confidence 68999999999999999999999999999999998665321 1223799999998765321 1144 5455 5545
Q ss_pred hcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCC
Q 013342 76 NCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQD 155 (445)
Q Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (445)
.+...+.++++++... . +++|||+|.+..|+..+|+++|||++.++++.+.....+.+.+.....+..+..+
T Consensus 86 ~~~~~l~~ll~~l~~~-------~-pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~ 157 (448)
T PLN02562 86 TMPPQLERLLHKLDED-------G-EVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETG 157 (448)
T ss_pred hchHHHHHHHHHhcCC-------C-CcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhcccccccc
Confidence 6778778877776321 1 4699999999999999999999999999999888777665543322222111110
Q ss_pred -CC--CCCcCCCCCCCCCCCCCCCccccc--chHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhc----cCCCc
Q 013342 156 -PN--KLQDPVPGLHPLRFKDLPTYRHEI--MEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQ----CQVPI 225 (445)
Q Consensus 156 -~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~----~~~~~ 225 (445)
.. .....+|+++.++..+++.+.... .....+.+.+ +....+++.+++|||.+||+..++.++.. ..+++
T Consensus 158 ~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v 237 (448)
T PLN02562 158 CPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQI 237 (448)
T ss_pred ccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCE
Confidence 00 011246777777888888653222 2223444444 56667789999999999999887765532 34689
Q ss_pred eeeccCCCCCCCCC-CCCCcCCCchhchhhccCCCCceEEEEecccc-cCChhhHHHHHHHHHhCCCCEEEEECCCCCCC
Q 013342 226 FPIGPFHKFAPFST-SCNFLNEDTSCISWLNNQAPESVIYVSLGSVA-SMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNA 303 (445)
Q Consensus 226 ~~vGp~~~~~~~~~-~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~ 303 (445)
+.|||++....... ....++.+.+|.+||++++++++|||||||+. .++.+++++++.+|++++++|||+++.+.
T Consensus 238 ~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~--- 314 (448)
T PLN02562 238 LQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVW--- 314 (448)
T ss_pred EEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCc---
Confidence 99999986542100 01123455568899998888899999999986 57889999999999999999999996531
Q ss_pred CCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhhee
Q 013342 304 PEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRT 383 (445)
Q Consensus 304 ~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 383 (445)
.+.+|+++.++.++|+++++|+||.+||+|+++++||||||+||++|++++|||||++|+++||+.||+++++.+|+
T Consensus 315 ---~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~ 391 (448)
T PLN02562 315 ---REGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKI 391 (448)
T ss_pred ---hhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCc
Confidence 13478899899999999999999999999999999999999999999999999999999999999999999764699
Q ss_pred eeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 384 GLELENELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 384 g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
|+.+. +++.++|+++|+++|+| ++||+||++++++++++ ..|||+.+++++|++++
T Consensus 392 g~~~~-~~~~~~l~~~v~~~l~~---~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~ 447 (448)
T PLN02562 392 GVRIS-GFGQKEVEEGLRKVMED---SGMGERLMKLRERAMGE-EARLRSMMNFTTLKDEL 447 (448)
T ss_pred eeEeC-CCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHh
Confidence 99886 58999999999999998 89999999999999987 67899999999999986
No 4
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.2e-64 Score=490.51 Aligned_cols=415 Identities=29% Similarity=0.524 Sum_probs=331.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCC--CCCCCceEEEcCCCCCCCC-CCC-Ch-hHHHHHHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNP--SNHPEFNFQSIPDGLTADD-VST-GI-NILITNLLNV 75 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~-~~~-~~-~~~~~~~~~~ 75 (445)
|+++|+|++||++|++.||+.|+.+|+.|||++++.+.... ...++++++.+|++++++. ... ++ .++. .+..
T Consensus 8 vv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~~~~~~~~--~~~~ 85 (449)
T PLN02173 8 VLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSPISIATISDGYDQGGFSSAGSVPEYLQ--NFKT 85 (449)
T ss_pred EEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccCCCCCEEEEEcCCCCCCcccccccCHHHHHH--HHHH
Confidence 58999999999999999999999999999999998665432 1224699999999888732 333 56 6666 6666
Q ss_pred hcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCC
Q 013342 76 NCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQD 155 (445)
Q Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (445)
.+.+.+.++++++.... . ++||||+|.+..|+..+|+++|||.+.++++++.....+.+ ... ..
T Consensus 86 ~~~~~~~~~l~~~~~~~------~-Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~-~~~-~~------- 149 (449)
T PLN02173 86 FGSKTVADIIRKHQSTD------N-PITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL-SYI-NN------- 149 (449)
T ss_pred hhhHHHHHHHHHhhccC------C-CceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh-HHh-cc-------
Confidence 78888888887764321 1 34999999999999999999999999999988877655432 111 00
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccc--cchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCC
Q 013342 156 PNKLQDPVPGLHPLRFKDLPTYRHE--IMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFH 232 (445)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~ 232 (445)
......+|+++.++..+++.+... ........+.. .....+++.+++|||.+||+...+.++. . ++++.|||++
T Consensus 150 -~~~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~-~-~~v~~VGPl~ 226 (449)
T PLN02173 150 -GSLTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSK-V-CPVLTIGPTV 226 (449)
T ss_pred -CCccCCCCCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHh-c-CCeeEEcccC
Confidence 011223677777788888865432 12223333334 5566788999999999999999988865 3 4799999997
Q ss_pred CCCC------CCC--CCCCc--CCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCC
Q 013342 233 KFAP------FST--SCNFL--NEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNN 302 (445)
Q Consensus 233 ~~~~------~~~--~~~~~--~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~ 302 (445)
.... ... ....+ ..+++|.+||+.++++++|||||||+...+.+++.+++.+| .+.+|+|+++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~-- 302 (449)
T PLN02173 227 PSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASE-- 302 (449)
T ss_pred chhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccc--
Confidence 4210 000 00111 23346999999988899999999999999999999999999 5678999997431
Q ss_pred CCCccCCchHHHHHHh-cCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhh
Q 013342 303 APEGIDLLPEVLAEAV-QENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVW 381 (445)
Q Consensus 303 ~~~~~~~~~~~~~~~~-~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~ 381 (445)
...+|+++.++. ++|+++++|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.|
T Consensus 303 ----~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~ 378 (449)
T PLN02173 303 ----ESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVW 378 (449)
T ss_pred ----hhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHh
Confidence 124788888777 588999999999999999999999999999999999999999999999999999999998757
Q ss_pred eeeeEeCc-----ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 382 RTGLELEN-----ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 382 G~g~~~~~-----~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
|+|+.+.. .++.++|+++|+++|+|++|+.+|+||+++++++++++.+||++.+++++|++.+
T Consensus 379 g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~ 446 (449)
T PLN02173 379 KVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKI 446 (449)
T ss_pred CceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHh
Confidence 99988853 2699999999999999888899999999999999999999999999999999986
No 5
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=7.3e-64 Score=490.19 Aligned_cols=425 Identities=27% Similarity=0.414 Sum_probs=321.0
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-----CCCCceEEEcC----CCCCCCCCCC-Ch-----
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPS-----NHPEFNFQSIP----DGLTADDVST-GI----- 65 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~-----~~~~~~~~~l~----~~~~~~~~~~-~~----- 65 (445)
|+++|+|++||++|++.||+.|+.+|..|||++++.+..... ..++++++.+| ++++++.... ++
T Consensus 9 Vvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~~~~~~~~~~ 88 (472)
T PLN02670 9 VAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAESSTDVPYTKQ 88 (472)
T ss_pred EEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCcccccccchhhH
Confidence 689999999999999999999999999999999987653321 12368999998 6677654333 33
Q ss_pred hHHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhh
Q 013342 66 NILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHL 145 (445)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 145 (445)
.++. .....+...+.++++++ +++|||+|.+..|+..+|+++|||++.++++++...+.+.+....
T Consensus 89 ~~~~--~~~~~~~~~~~~~l~~~------------~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~ 154 (472)
T PLN02670 89 QLLK--KAFDLLEPPLTTFLETS------------KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSL 154 (472)
T ss_pred HHHH--HHHHHhHHHHHHHHHhC------------CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhh
Confidence 1333 34445566555555543 789999999999999999999999999999998887776432211
Q ss_pred hhcCCCCCCCCC--CCCcCCCCCC--CCCCCCCCCcccc--cchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHH
Q 013342 146 EEEGSSPLQDPN--KLQDPVPGLH--PLRFKDLPTYRHE--IMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQ 218 (445)
Q Consensus 146 ~~~~~~p~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~ 218 (445)
...+..+..... .....+|... .++..+++.+... ........+.+ .....+++.+++|||.+||+..++.++
T Consensus 155 ~~~~~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~ 234 (472)
T PLN02670 155 MEGGDLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLS 234 (472)
T ss_pred hhcccCCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHH
Confidence 111111111100 0111122111 2344555544321 11122233333 445567899999999999999999998
Q ss_pred hccCCCceeeccCCCCCCCCCCCCCc--CCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEE
Q 013342 219 QQCQVPIFPIGPFHKFAPFSTSCNFL--NEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVI 296 (445)
Q Consensus 219 ~~~~~~~~~vGp~~~~~~~~~~~~~~--~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~ 296 (445)
..++++++.|||+............. ..++++.+|||++++++||||||||+..++.+++.+++.+|+.++++|||++
T Consensus 235 ~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~ 314 (472)
T PLN02670 235 DLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVL 314 (472)
T ss_pred HhhCCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 86667899999997531110000000 1124699999988889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCchHHHHHHhcCCcEEE-EeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHH
Q 013342 297 RPSSNNAPEGIDLLPEVLAEAVQENGCIV-KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNAR 375 (445)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~ 375 (445)
+.......+..+.+|+++.++..++++++ +|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+
T Consensus 315 r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~ 394 (472)
T PLN02670 315 RNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTR 394 (472)
T ss_pred cCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHH
Confidence 75321111112358999999988888775 99999999999999999999999999999999999999999999999999
Q ss_pred HHHhhheeeeEeCc-----ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 376 YVSHVWRTGLELEN-----ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 376 ~v~~~~G~g~~~~~-----~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
++++ +|+|+.++. .++.++|+++|+++|.|++|++||+||+++++.+++. +...+++++|++.+
T Consensus 395 ~v~~-~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~----~~~~~~~~~~~~~l 463 (472)
T PLN02670 395 LLHG-KKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDM----DRNNRYVDELVHYL 463 (472)
T ss_pred HHHH-cCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCc----chhHHHHHHHHHHH
Confidence 9999 799999964 3899999999999999877789999999999999998 99999999998865
No 6
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1e-63 Score=494.46 Aligned_cols=422 Identities=32% Similarity=0.532 Sum_probs=329.3
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCC---CCCceEEEcCCCCCCCCCCC-Ch-hHHHHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN--GFSITVVHTHFNPPNPSN---HPEFNFQSIPDGLTADDVST-GI-NILITNLL 73 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~~~ 73 (445)
|+++|+|++||++|++.||++|+++ ||+|||++++.+...+.. .+++.|+.+|+++++..... ++ .++. .+
T Consensus 13 Vvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~~~gi~fv~lp~~~p~~~~~~~~~~~~~~--~~ 90 (459)
T PLN02448 13 VVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIPNVIPSELVRAADFPGFLE--AV 90 (459)
T ss_pred EEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCCCCCEEEEECCCCCCCccccccCHHHHHH--HH
Confidence 6899999999999999999999999 999999999866543221 24899999998666543333 55 6555 55
Q ss_pred HHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCC
Q 013342 74 NVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPL 153 (445)
Q Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 153 (445)
...+...+.++++.+. . ++||||+|.++.|+..+|+++|||++.++++++.....+.+.+.....+..+.
T Consensus 91 ~~~~~~~~~~~l~~~~---~-------~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~ 160 (459)
T PLN02448 91 MTKMEAPFEQLLDRLE---P-------PVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPV 160 (459)
T ss_pred HHHhHHHHHHHHHhcC---C-------CcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCC
Confidence 5566677777776652 2 78999999999999999999999999999999977776655432221111121
Q ss_pred CCC---CCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeec
Q 013342 154 QDP---NKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIG 229 (445)
Q Consensus 154 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vG 229 (445)
... ......+|++..++..+++.+.........+.+.. +.....++.+++|||.+||+...+.+++.++.+++.||
T Consensus 161 ~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iG 240 (459)
T PLN02448 161 ELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIG 240 (459)
T ss_pred ccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEec
Confidence 110 01112367776677777776543332232333444 55566788999999999999989998887767899999
Q ss_pred cCCCCCCC--CCCCCCc-CCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCc
Q 013342 230 PFHKFAPF--STSCNFL-NEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEG 306 (445)
Q Consensus 230 p~~~~~~~--~~~~~~~-~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~ 306 (445)
|+...... ....... +.+.++.+|++.++++++|||||||+...+.+++++++++|++.+.+|||+++..
T Consensus 241 P~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~------- 313 (459)
T PLN02448 241 PSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE------- 313 (459)
T ss_pred CcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc-------
Confidence 99753211 0000001 1223688999988889999999999988888999999999999999999987432
Q ss_pred cCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeE
Q 013342 307 IDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLE 386 (445)
Q Consensus 307 ~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~ 386 (445)
..++.+..++|+++++|+||.+||+|+++++||||||+||++|++++|||||++|+++||+.||+++++.||+|+.
T Consensus 314 ----~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~ 389 (459)
T PLN02448 314 ----ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWR 389 (459)
T ss_pred ----hhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEE
Confidence 1234444567899999999999999999999999999999999999999999999999999999999875788888
Q ss_pred eCc------ccCHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhC
Q 013342 387 LEN------ELEREVVEKAVRRLMVGE--EGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFIN 445 (445)
Q Consensus 387 ~~~------~~t~~~l~~ai~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 445 (445)
+.. .+++++|+++|+++|+|+ +|+.||+||++|++++++++.+|||+.+++++|++.++
T Consensus 390 ~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~ 456 (459)
T PLN02448 390 VKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDIS 456 (459)
T ss_pred EecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 742 479999999999999863 57899999999999999999999999999999999873
No 7
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=4.1e-63 Score=484.43 Aligned_cols=432 Identities=23% Similarity=0.400 Sum_probs=327.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCCCCCC-C----C----CCCCCceEEEcCCCCC-CCCCCC-Ch-h
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNG--FSITVVHTHFNPP-N----P----SNHPEFNFQSIPDGLT-ADDVST-GI-N 66 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~G--h~Vt~~~~~~~~~-~----~----~~~~~~~~~~l~~~~~-~~~~~~-~~-~ 66 (445)
++++|+|++||++|++.||+.|+.+| ..|||++++.+.. . . ...++++|+.+|+... +..... +. .
T Consensus 6 vv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~~~~~ 85 (468)
T PLN02207 6 LIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEEKPTLGGTQSVEA 85 (468)
T ss_pred EEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCCCCccccccCHHH
Confidence 58999999999999999999999998 9999999986541 1 1 1123699999996432 110112 44 4
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhh
Q 013342 67 ILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLE 146 (445)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 146 (445)
++. .+...+...+.+.+.++.+... ..++ +++|||+|.+..|+..+|+++|||.+.++++.+.....+.+.+...
T Consensus 86 ~~~--~~~~~~~~~~~~~~~~~l~~~~--~~~~-pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~ 160 (468)
T PLN02207 86 YVY--DVIEKNIPLVRNIVMDILSSLA--LDGV-KVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRH 160 (468)
T ss_pred HHH--HHHHhcchhHHHHHHHHHHHhc--cCCC-CeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhcc
Confidence 444 3444565544544454443210 0001 3599999999999999999999999999999998887765543221
Q ss_pred hcC-CCCCCCCCCCCcCCCCC-CCCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHh-ccC
Q 013342 147 EEG-SSPLQDPNKLQDPVPGL-HPLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQ-QCQ 222 (445)
Q Consensus 147 ~~~-~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~-~~~ 222 (445)
... ..+... .+....+|++ +.++..+++.+..... . ...+.+ .....+++.+++||+++||++.++.++. ...
T Consensus 161 ~~~~~~~~~~-~~~~~~vPgl~~~l~~~dlp~~~~~~~-~-~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~ 237 (468)
T PLN02207 161 SKDTSVFVRN-SEEMLSIPGFVNPVPANVLPSALFVED-G-YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNY 237 (468)
T ss_pred ccccccCcCC-CCCeEECCCCCCCCChHHCcchhcCCc-c-HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCC
Confidence 110 011000 1111247887 5688888886542211 1 333334 5567789999999999999998888754 233
Q ss_pred CCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCC
Q 013342 223 VPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNN 302 (445)
Q Consensus 223 ~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~ 302 (445)
++++.|||++..+....+......++++.+||++++++++|||||||...++.+++++++.||++++++|||+++.....
T Consensus 238 p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~~ 317 (468)
T PLN02207 238 PSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVT 317 (468)
T ss_pred CcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCcc
Confidence 78999999986543210000011235699999988889999999999999999999999999999999999999743211
Q ss_pred CCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhhe
Q 013342 303 APEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWR 382 (445)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G 382 (445)
..+.+|++++++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|
T Consensus 318 ---~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~g 394 (468)
T PLN02207 318 ---NDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELK 394 (468)
T ss_pred ---ccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhC
Confidence 12348899999999999999999999999999999999999999999999999999999999999999998765479
Q ss_pred eeeEeC------c--ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 383 TGLELE------N--ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 383 ~g~~~~------~--~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+|+.+. . .++.++|+++|+++|++ ++++||+||+++++++++++.+||++++++++|++++
T Consensus 395 vGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~ 463 (468)
T PLN02207 395 LAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDV 463 (468)
T ss_pred ceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 999762 1 35999999999999973 3489999999999999999999999999999999986
No 8
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=2.3e-63 Score=487.00 Aligned_cols=422 Identities=30% Similarity=0.509 Sum_probs=326.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCCCCCCC----CCCCCCceEEEcCC----CCCCCCCCCCh-hHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILY-SNGFSITVVHTHFNPPN----PSNHPEFNFQSIPD----GLTADDVSTGI-NILIT 70 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~-~~Gh~Vt~~~~~~~~~~----~~~~~~~~~~~l~~----~~~~~~~~~~~-~~~~~ 70 (445)
|+++|+|++||++|++.||+.|+ ++|+.|||++++.+... ....++++++.+|. ++++... +. ..+.
T Consensus 8 Vvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~~~~--~~~~~~~- 84 (481)
T PLN02992 8 AAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVDPSA--HVVTKIG- 84 (481)
T ss_pred EEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCCCCc--cHHHHHH-
Confidence 58999999999999999999998 78999999999876432 11223699999984 3331111 22 2233
Q ss_pred HHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCC
Q 013342 71 NLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGS 150 (445)
Q Consensus 71 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 150 (445)
.....+...+++++.++ . . +|+|||+|.++.|+..+|+++|||++.++++.+...+.+.+.+.......
T Consensus 85 -~~~~~~~~~~~~~l~~~---~------~-~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~ 153 (481)
T PLN02992 85 -VIMREAVPTLRSKIAEM---H------Q-KPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIK 153 (481)
T ss_pred -HHHHHhHHHHHHHHHhc---C------C-CCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccc
Confidence 33345556666666553 1 2 78999999999999999999999999999999988766554432111100
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhc--c----CC
Q 013342 151 SPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQ--C----QV 223 (445)
Q Consensus 151 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~--~----~~ 223 (445)
.+... ......+|+++.++..+++...........+.+.+ ...+.+++.+++|||.+||...++.++.. + .+
T Consensus 154 ~~~~~-~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~ 232 (481)
T PLN02992 154 EEHTV-QRKPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARV 232 (481)
T ss_pred ccccc-CCCCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCC
Confidence 00000 01112467777777777775322223233444445 55667899999999999999999888652 1 25
Q ss_pred CceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCC
Q 013342 224 PIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNA 303 (445)
Q Consensus 224 ~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~ 303 (445)
+++.|||+...... -..+++|.+|||.+++++||||||||+..++.+++++++.+|+.++++|||++++....+
T Consensus 233 ~v~~VGPl~~~~~~------~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~ 306 (481)
T PLN02992 233 PVYPIGPLCRPIQS------SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGS 306 (481)
T ss_pred ceEEecCccCCcCC------CcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccc
Confidence 79999999753211 123456999999888899999999999999999999999999999999999997431100
Q ss_pred -------------CCc-cCCchHHHHHHhcCCcEEE-EeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCccc
Q 013342 304 -------------PEG-IDLLPEVLAEAVQENGCIV-KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFG 368 (445)
Q Consensus 304 -------------~~~-~~~~~~~~~~~~~~n~~~~-~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~ 368 (445)
.+. .+.+|++|.++..++.+++ +|+||.+||+|+++++||||||+||++|++++|||||++|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~ 386 (481)
T PLN02992 307 ACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFA 386 (481)
T ss_pred cccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccc
Confidence 010 1247899999988776655 9999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHH-hhheeeeEeCc---ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHh--cCCChHHHHHHHHH
Q 013342 369 DQRVNARYVS-HVWRTGLELEN---ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCIT--EGGSSYKSLNEFLE 442 (445)
Q Consensus 369 DQ~~na~~v~-~~~G~g~~~~~---~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~--~~g~~~~~~~~~~~ 442 (445)
||+.||++++ + +|+|+.++. .++.++|+++|+++|.|++|+.++++|+++++++++++. +|||+.+++++|++
T Consensus 387 DQ~~na~~~~~~-~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~ 465 (481)
T PLN02992 387 EQNMNAALLSDE-LGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTK 465 (481)
T ss_pred hhHHHHHHHHHH-hCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHH
Confidence 9999999995 7 799999965 489999999999999987788999999999999999994 59999999999998
Q ss_pred Hh
Q 013342 443 FI 444 (445)
Q Consensus 443 ~~ 444 (445)
++
T Consensus 466 ~~ 467 (481)
T PLN02992 466 EC 467 (481)
T ss_pred HH
Confidence 75
No 9
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=3.4e-63 Score=487.48 Aligned_cols=420 Identities=29% Similarity=0.477 Sum_probs=324.5
Q ss_pred CEEEcCCCccChHHHHHHHHH--HHhCCCeEEEEeCCCCCCCCC----CCCCceEEEcCCCCCCCCCCCCh-hHHHHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTI--LYSNGFSITVVHTHFNPPNPS----NHPEFNFQSIPDGLTADDVSTGI-NILITNLL 73 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~--L~~~Gh~Vt~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~ 73 (445)
|+++|+|++||++|++.||+. |+++|+.|||++++.+...+. ....+.+..++++++++... +. .++. .+
T Consensus 11 vv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~-~~~~~~~--~~ 87 (456)
T PLN02210 11 VLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFFSDGLPKDDPR-APETLLK--SL 87 (456)
T ss_pred EEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccCCCCceEEEECCCCCCCCccc-CHHHHHH--HH
Confidence 689999999999999999999 559999999999987654321 12457888888877765321 33 4555 55
Q ss_pred HHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCC
Q 013342 74 NVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPL 153 (445)
Q Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 153 (445)
...+...+.++++.. +|||||+|.+..|+..+|+++|||.+.++++++.....+.+.+.. ....+.
T Consensus 88 ~~~~~~~l~~~l~~~------------~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~--~~~~~~ 153 (456)
T PLN02210 88 NKVGAKNLSKIIEEK------------RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMK--TNSFPD 153 (456)
T ss_pred HHhhhHHHHHHHhcC------------CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhc--cCCCCc
Confidence 445555555555432 899999999999999999999999999999998888766543211 111111
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHH-H-hhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccC
Q 013342 154 QDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLIT-S-MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPF 231 (445)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~ 231 (445)
.....-...+|+++.++..+++............... . ......++.+++|||.++|...++.+++ . +++++|||+
T Consensus 154 ~~~~~~~~~~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~-~~v~~VGPl 231 (456)
T PLN02210 154 LEDLNQTVELPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD-L-KPVIPIGPL 231 (456)
T ss_pred ccccCCeeeCCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh-c-CCEEEEccc
Confidence 1100011236777667777777654333332232222 3 3445678999999999999999988877 4 689999999
Q ss_pred CCCC---CCC----CC--CCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCC
Q 013342 232 HKFA---PFS----TS--CNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNN 302 (445)
Q Consensus 232 ~~~~---~~~----~~--~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~ 302 (445)
+... ... .. ...+..+++|.+||+.++++++|||||||+...+.+++++++.||+..+.+|||+++...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~-- 309 (456)
T PLN02210 232 VSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKE-- 309 (456)
T ss_pred CchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCc--
Confidence 7421 110 00 011345567899999888899999999999988999999999999999999999996431
Q ss_pred CCCccCCchHHHHHHh-cCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhh
Q 013342 303 APEGIDLLPEVLAEAV-QENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVW 381 (445)
Q Consensus 303 ~~~~~~~~~~~~~~~~-~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~ 381 (445)
....+..+.++. ++++++++|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.+
T Consensus 310 ----~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~ 385 (456)
T PLN02210 310 ----KAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVF 385 (456)
T ss_pred ----cccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHh
Confidence 011334555655 488889999999999999999999999999999999999999999999999999999998646
Q ss_pred eeeeEeCc-----ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhC
Q 013342 382 RTGLELEN-----ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFIN 445 (445)
Q Consensus 382 G~g~~~~~-----~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 445 (445)
|+|+.+.. .+++++|+++|+++|.|++|+.+|+||++|++.+++++.+|||+.+++++|++.++
T Consensus 386 g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 386 GIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred CeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 99999853 58999999999999998778899999999999999999999999999999999874
No 10
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=1.1e-62 Score=480.58 Aligned_cols=421 Identities=27% Similarity=0.451 Sum_probs=329.2
Q ss_pred CEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCC-CC-C---CCCCCceEEEcCCCCCCCCCC-C-Ch-hHHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYS-NGFSITVVHTHFNP-PN-P---SNHPEFNFQSIPDGLTADDVS-T-GI-NILITN 71 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~-~Gh~Vt~~~~~~~~-~~-~---~~~~~~~~~~l~~~~~~~~~~-~-~~-~~~~~~ 71 (445)
|+++|+|++||++|++.||+.|+. +|+.|||++++.+. .. . ...++++|+.++++++++... . +. .++.
T Consensus 6 vv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~~~~~~i~~~~i~dglp~g~~~~~~~~~~~~~-- 83 (455)
T PLN02152 6 FLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHNNVENLSFLTFSDGFDDGVISNTDDVQNRLV-- 83 (455)
T ss_pred EEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccCCCCCCEEEEEcCCCCCCccccccccHHHHHH--
Confidence 589999999999999999999996 69999999997542 21 1 112369999999888765422 3 45 5666
Q ss_pred HHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCC
Q 013342 72 LLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSS 151 (445)
Q Consensus 72 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (445)
.+...+.+.+.+++.++.... . +++|||+|.+..|+..+|+++|||.+.+++++++....+.+.....
T Consensus 84 ~~~~~~~~~l~~~l~~l~~~~------~-pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~----- 151 (455)
T PLN02152 84 NFERNGDKALSDFIEANLNGD------S-PVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGN----- 151 (455)
T ss_pred HHHHhccHHHHHHHHHhhccC------C-CceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccC-----
Confidence 666788888888888764322 1 5699999999999999999999999999999999888775532110
Q ss_pred CCCCCCCCCcCCCCCCCCCCCCCCCccccc--chHHHHHHHH-hhhcc--CCcEEEEcchhhhcHHHHHHHHhccCCCce
Q 013342 152 PLQDPNKLQDPVPGLHPLRFKDLPTYRHEI--MEHYLQLITS-MYKIR--TSSAVIWNTMHYLEESSLAQLQQQCQVPIF 226 (445)
Q Consensus 152 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~--~~~~~l~n~~~~le~~~~~~~~~~~~~~~~ 226 (445)
. ....+|+++.++..+++.+.... .....+.+.+ ..... .++.+++|||.+||+..++.++. .+++
T Consensus 152 ---~---~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~---~~v~ 222 (455)
T PLN02152 152 ---N---SVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN---IEMV 222 (455)
T ss_pred ---C---CeeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc---CCEE
Confidence 0 11237777777888888754221 2222333333 33222 24799999999999999988765 3799
Q ss_pred eeccCCCCCC--CCC-CC--CCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCC
Q 013342 227 PIGPFHKFAP--FST-SC--NFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSN 301 (445)
Q Consensus 227 ~vGp~~~~~~--~~~-~~--~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~ 301 (445)
.|||+..... ... .. ..++.+.++.+|||.+++++||||||||+..++.+++++++.+|++++.+|||+++....
T Consensus 223 ~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~ 302 (455)
T PLN02152 223 AVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLN 302 (455)
T ss_pred EEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 9999975321 100 00 001234579999998888999999999999999999999999999999999999975311
Q ss_pred CC----CCc--cCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHH
Q 013342 302 NA----PEG--IDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNAR 375 (445)
Q Consensus 302 ~~----~~~--~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~ 375 (445)
.+ .+. ...+|+++.++.++|+++++|+||.+||+|+++++||||||+||++|++++|||||++|+++||+.||+
T Consensus 303 ~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~ 382 (455)
T PLN02152 303 REAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAK 382 (455)
T ss_pred cccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHH
Confidence 00 010 112468898899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhheeeeEeC--c--ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhC
Q 013342 376 YVSHVWRTGLELE--N--ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFIN 445 (445)
Q Consensus 376 ~v~~~~G~g~~~~--~--~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 445 (445)
++++.||+|+.+. . .++.++|+++|+++|+|+ +..||+||+++++++++++.+||++++++++||+++.
T Consensus 383 ~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 383 LLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTLC 455 (455)
T ss_pred HHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhC
Confidence 9988557776663 2 469999999999999863 4569999999999999999999999999999999873
No 11
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.7e-62 Score=481.54 Aligned_cols=431 Identities=25% Similarity=0.376 Sum_probs=321.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCC----CCCCCceEEEcC----CCCCCCCCCC-Ch--hHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNP----SNHPEFNFQSIP----DGLTADDVST-GI--NILI 69 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~----~~~~~~~~~~l~----~~~~~~~~~~-~~--~~~~ 69 (445)
|+++|+|++||++|++.||+.|+.+|+.|||++++.+.... ...++++++.+| ++++++.... ++ ..+.
T Consensus 12 Vvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lPdG~~~~~~~~~~~~~ 91 (477)
T PLN02863 12 VLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIPSGVENVKDLPPSGFP 91 (477)
T ss_pred EEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCCCCCcChhhcchhhHH
Confidence 58999999999999999999999999999999998775431 122357877765 2444444332 22 2222
Q ss_pred -HHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhc
Q 013342 70 -TNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEE 148 (445)
Q Consensus 70 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 148 (445)
.......+...+.+++... . . +++|||+|.+..|+..+|+++|||++.+++++++....+.+.....+.
T Consensus 92 ~~~~a~~~~~~~~~~~l~~~---~------~-~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~ 161 (477)
T PLN02863 92 LMIHALGELYAPLLSWFRSH---P------S-PPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPT 161 (477)
T ss_pred HHHHHHHHhHHHHHHHHHhC---C------C-CCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccc
Confidence 0022234444444444432 1 2 779999999999999999999999999999999999888664321110
Q ss_pred CCCCCCCCCCC-CcCCCCCCCCCCCCCCCcccc--cchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhccC-C
Q 013342 149 GSSPLQDPNKL-QDPVPGLHPLRFKDLPTYRHE--IMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ-V 223 (445)
Q Consensus 149 ~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~-~ 223 (445)
...+....... ...+|+++.++..+++.+... ........+.+ ......++.+++|||.+||+..++.++..++ +
T Consensus 162 ~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~ 241 (477)
T PLN02863 162 KINPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHD 241 (477)
T ss_pred cccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCC
Confidence 00010000011 123677777788888764321 12223333333 3344567889999999999999999988765 6
Q ss_pred CceeeccCCCCCCCC-----CCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECC
Q 013342 224 PIFPIGPFHKFAPFS-----TSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRP 298 (445)
Q Consensus 224 ~~~~vGp~~~~~~~~-----~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~ 298 (445)
+++.|||++...... .+......++++.+||+.++++++|||||||+...+.+++++++.+|++++.+|||+++.
T Consensus 242 ~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~ 321 (477)
T PLN02863 242 RVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKE 321 (477)
T ss_pred CeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 899999997532110 000111124579999998888999999999999999999999999999999999999975
Q ss_pred CCCCCCCccCCchHHHHHHhcCCc-EEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHH
Q 013342 299 SSNNAPEGIDLLPEVLAEAVQENG-CIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYV 377 (445)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~n~-~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v 377 (445)
..... .....+|+++.++..++. ++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++
T Consensus 322 ~~~~~-~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v 400 (477)
T PLN02863 322 PVNEE-SDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLL 400 (477)
T ss_pred Ccccc-cchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHH
Confidence 32111 112357889888776554 4559999999999999999999999999999999999999999999999999997
Q ss_pred HhhheeeeEeCc----ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 378 SHVWRTGLELEN----ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 378 ~~~~G~g~~~~~----~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
++.||+|+.+.. ..+.+++.++|+++|.+ ++.||+||+++++++++++.+||++.+++++|++.+
T Consensus 401 ~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~--~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i 469 (477)
T PLN02863 401 VDELKVAVRVCEGADTVPDSDELARVFMESVSE--NQVERERAKELRRAALDAIKERGSSVKDLDGFVKHV 469 (477)
T ss_pred HHhhceeEEeccCCCCCcCHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 543899999942 46899999999999942 289999999999999999999999999999999986
No 12
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=2.9e-62 Score=476.97 Aligned_cols=419 Identities=27% Similarity=0.478 Sum_probs=318.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCC--CeEEE--EeCCCCCC-------C-CCCCCCceEEEcCCCCCCCCC--CC-Ch
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNG--FSITV--VHTHFNPP-------N-PSNHPEFNFQSIPDGLTADDV--ST-GI 65 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~G--h~Vt~--~~~~~~~~-------~-~~~~~~~~~~~l~~~~~~~~~--~~-~~ 65 (445)
|+++|+|++||++|++.||+.|+.+| +.||+ +++..+.. . ....++++++.+|+..+.... .. +.
T Consensus 6 vvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~~~~ 85 (451)
T PLN03004 6 IVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVTPYSSSSTSRHHH 85 (451)
T ss_pred EEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCCCCCCccccccCH
Confidence 58999999999999999999999998 55665 44433221 1 112246999999976542221 11 33
Q ss_pred -hHHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhh
Q 013342 66 -NILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLH 144 (445)
Q Consensus 66 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 144 (445)
.++. .+...+...+.+++.++.. . + +++|||+|.+..|+..+|+++|||++.++++++...+.+.+.+.
T Consensus 86 ~~~~~--~~~~~~~~~~~~~l~~l~~-~------~-pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~ 155 (451)
T PLN03004 86 ESLLL--EILCFSNPSVHRTLFSLSR-N------F-NVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPT 155 (451)
T ss_pred HHHHH--HHHHhhhHHHHHHHHhcCC-C------C-CceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHh
Confidence 3444 4445677777777776521 1 2 56999999999999999999999999999999998888766443
Q ss_pred hhhcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhccC-
Q 013342 145 LEEEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ- 222 (445)
Q Consensus 145 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~- 222 (445)
.....-.+... ......+|+++.++..+++.+.........+.+.. ......++.+++|||.+||...++.++..+.
T Consensus 156 ~~~~~~~~~~~-~~~~v~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~ 234 (451)
T PLN03004 156 IDETTPGKNLK-DIPTVHIPGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCF 234 (451)
T ss_pred ccccccccccc-cCCeecCCCCCCCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCC
Confidence 21110000000 11112478887788888887643333333444444 5566778899999999999999999877543
Q ss_pred CCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCC
Q 013342 223 VPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNN 302 (445)
Q Consensus 223 ~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~ 302 (445)
++++.|||+....... ......+.+|.+|||.+++++||||||||+..++.+++++++.||+.++.+|||+++.....
T Consensus 235 ~~v~~vGPl~~~~~~~--~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~ 312 (451)
T PLN03004 235 RNIYPIGPLIVNGRIE--DRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPEL 312 (451)
T ss_pred CCEEEEeeeccCcccc--ccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccc
Confidence 5899999998532210 01111234699999998889999999999988999999999999999999999999753110
Q ss_pred CC--CccC-CchHHHHHHhcCCc-EEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHH
Q 013342 303 AP--EGID-LLPEVLAEAVQENG-CIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVS 378 (445)
Q Consensus 303 ~~--~~~~-~~~~~~~~~~~~n~-~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~ 378 (445)
.. .... .+|++|+++..++. ++.+|+||.+||+|+++++||||||+||++|++++|||||++|+++||+.||++++
T Consensus 313 ~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~ 392 (451)
T PLN03004 313 EKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIV 392 (451)
T ss_pred cccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHH
Confidence 00 0112 27889999887654 55699999999999999999999999999999999999999999999999999997
Q ss_pred hhheeeeEeCc----ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 013342 379 HVWRTGLELEN----ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYK 435 (445)
Q Consensus 379 ~~~G~g~~~~~----~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 435 (445)
+.+|+|+.++. .+++++|+++|+++|+| ++|+++|++++++.+.++.+|||+++
T Consensus 393 ~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~---~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 393 DEIKIAISMNESETGFVSSTEVEKRVQEIIGE---CPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred HHhCceEEecCCcCCccCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 54799999964 47999999999999998 89999999999999999999999865
No 13
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=7.5e-62 Score=473.59 Aligned_cols=425 Identities=27% Similarity=0.444 Sum_probs=325.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCCCCC------CCC---CCCceEEEcCCCCCCCC-CC-CCh-hH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN-GFSITVVHTHFNPPN------PSN---HPEFNFQSIPDGLTADD-VS-TGI-NI 67 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~-Gh~Vt~~~~~~~~~~------~~~---~~~~~~~~l~~~~~~~~-~~-~~~-~~ 67 (445)
++++|+|++||++|++.||+.|+.+ |..|||+++..+... ... .++++++.+|....++. .. .+. ..
T Consensus 6 vvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~l~~~~~~~~~~ 85 (470)
T PLN03015 6 ALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVDNLVEPDATIFTK 85 (470)
T ss_pred EEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECCCCccccCCCCCccHHHH
Confidence 5899999999999999999999987 999999987654321 111 12599999985332221 11 123 33
Q ss_pred HHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCc-eEEEccchHHHHHHHHhhhhhh
Q 013342 68 LITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQ-SIILRTTSAATQISRLALLHLE 146 (445)
Q Consensus 68 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP-~v~~~~~~~~~~~~~~~~~~~~ 146 (445)
+. .....+...++++++++. . +++|||+|.+..|+..+|+++||| .+.++++.++....+.+.+...
T Consensus 86 ~~--~~~~~~~~~~~~~l~~l~---------~-~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~ 153 (470)
T PLN03015 86 MV--VKMRAMKPAVRDAVKSMK---------R-KPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLD 153 (470)
T ss_pred HH--HHHHhchHHHHHHHHhcC---------C-CCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhh
Confidence 33 344577777777777652 1 679999999999999999999999 5778888877776665543321
Q ss_pred hcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhcc----
Q 013342 147 EEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQC---- 221 (445)
Q Consensus 147 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~---- 221 (445)
...-........ ...+|+++.++..+++.............+.. .....+++.+++|||.+||+..++.++..+
T Consensus 154 ~~~~~~~~~~~~-~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~ 232 (470)
T PLN03015 154 TVVEGEYVDIKE-PLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNR 232 (470)
T ss_pred cccccccCCCCC-eeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhccccc
Confidence 110000001001 12378887888888886432222222223333 555788999999999999999999887752
Q ss_pred --CCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCC
Q 013342 222 --QVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPS 299 (445)
Q Consensus 222 --~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~ 299 (445)
.++++.|||+...... .+.++++.+|||.+++++||||||||+..++.+++++++.+|+.++++|||+++..
T Consensus 233 ~~~~~v~~VGPl~~~~~~------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~ 306 (470)
T PLN03015 233 VMKVPVYPIGPIVRTNVH------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRP 306 (470)
T ss_pred ccCCceEEecCCCCCccc------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecC
Confidence 2579999999842111 11234699999998889999999999999999999999999999999999999743
Q ss_pred CCC-------CCCccCCchHHHHHHhcCCcEEE-EeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchh
Q 013342 300 SNN-------APEGIDLLPEVLAEAVQENGCIV-KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQR 371 (445)
Q Consensus 300 ~~~-------~~~~~~~~~~~~~~~~~~n~~~~-~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~ 371 (445)
... ..+..+.+|+++.++..++++++ +|+||.+||+|+++++|||||||||++|++++|||||++|+++||+
T Consensus 307 ~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~ 386 (470)
T PLN03015 307 ASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQW 386 (470)
T ss_pred ccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchH
Confidence 110 00011248899999988888665 9999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhheeeeEeC----c-ccCHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 372 VNARYVSHVWRTGLELE----N-ELEREVVEKAVRRLMVG--EEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 372 ~na~~v~~~~G~g~~~~----~-~~t~~~l~~ai~~ll~~--~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
.||+++++.||+|+.+. . .++.++|+++|+++|.+ ++|+.+|+||++|++++++++.+|||+.+++++|++.+
T Consensus 387 ~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~ 466 (470)
T PLN03015 387 MNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRC 466 (470)
T ss_pred HHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhc
Confidence 99999954489999995 2 58999999999999963 56899999999999999999999999999999999874
No 14
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=7.5e-62 Score=480.94 Aligned_cols=427 Identities=29% Similarity=0.450 Sum_probs=329.2
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCC----CeEEEEeCCCCCC----C----C---C-CCCCceEEEcCCCCCCCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNG----FSITVVHTHFNPP----N----P---S-NHPEFNFQSIPDGLTADDVSTG 64 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~G----h~Vt~~~~~~~~~----~----~---~-~~~~~~~~~l~~~~~~~~~~~~ 64 (445)
|+++|+|++||++|++.||+.|+.+| +.|||++++.+.. . . . ...++.++.+|+...+.... +
T Consensus 6 VVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~e-~ 84 (480)
T PLN00164 6 VVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVEPPTDAA-G 84 (480)
T ss_pred EEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCCCCCccc-c
Confidence 68999999999999999999999997 7899999865422 1 0 0 11259999999754221111 3
Q ss_pred h-hHHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhh
Q 013342 65 I-NILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALL 143 (445)
Q Consensus 65 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 143 (445)
. .++. .+...+.+.+.+++..+ . . +++|||+|.+..|+..+|+++|||++.++++.+.....+.+.+
T Consensus 85 ~~~~~~--~~~~~~~~~l~~~L~~l---~------~-pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~ 152 (480)
T PLN00164 85 VEEFIS--RYIQLHAPHVRAAIAGL---S------C-PVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLP 152 (480)
T ss_pred HHHHHH--HHHHhhhHHHHHHHHhc---C------C-CceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhh
Confidence 3 4444 45556777777666654 1 2 5799999999999999999999999999999999888776654
Q ss_pred hhhhcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhcc-
Q 013342 144 HLEEEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQC- 221 (445)
Q Consensus 144 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~- 221 (445)
......-.+... ..-...+|+++.++..+++.......+...+.+.. .....+++.+++|||.+||+..++.++...
T Consensus 153 ~~~~~~~~~~~~-~~~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~ 231 (480)
T PLN00164 153 ALDEEVAVEFEE-MEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRC 231 (480)
T ss_pred hhcccccCcccc-cCcceecCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccc
Confidence 321110000111 00011378887788888886543332222333333 455677899999999999999999887742
Q ss_pred -----CCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEE
Q 013342 222 -----QVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVI 296 (445)
Q Consensus 222 -----~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~ 296 (445)
.++++.|||++..... ....+.+++|.+||+.++++++|||||||+..++.+++++++.||+.++++|||++
T Consensus 232 ~~~~~~~~v~~vGPl~~~~~~---~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~ 308 (480)
T PLN00164 232 TPGRPAPTVYPIGPVISLAFT---PPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVL 308 (480)
T ss_pred cccCCCCceEEeCCCcccccc---CCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 1579999999853211 01123456799999998889999999999988999999999999999999999999
Q ss_pred CCCCCCC------CCccCCchHHHHHHhcCCcEEE-EeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccc
Q 013342 297 RPSSNNA------PEGIDLLPEVLAEAVQENGCIV-KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGD 369 (445)
Q Consensus 297 ~~~~~~~------~~~~~~~~~~~~~~~~~n~~~~-~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~D 369 (445)
+.....+ .+..+.+|+++.++..++.+++ +|+||.+||+|+++++|||||||||++|++++|||||++|+++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~D 388 (480)
T PLN00164 309 RGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAE 388 (480)
T ss_pred cCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCcccc
Confidence 7542111 0111247889988888887777 99999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHhhheeeeEeCc------ccCHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 013342 370 QRVNARYVSHVWRTGLELEN------ELEREVVEKAVRRLMVGE--EGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 370 Q~~na~~v~~~~G~g~~~~~------~~t~~~l~~ai~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 441 (445)
|+.||+++.+.||+|+.+.. .+++++|+++|+++|.|+ +|+.+|++|++|++++++++.+|||+.+++++|+
T Consensus 389 Q~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v 468 (480)
T PLN00164 389 QHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLA 468 (480)
T ss_pred chhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 99999887443799999852 369999999999999864 4789999999999999999999999999999999
Q ss_pred HHh
Q 013342 442 EFI 444 (445)
Q Consensus 442 ~~~ 444 (445)
+++
T Consensus 469 ~~~ 471 (480)
T PLN00164 469 REI 471 (480)
T ss_pred HHH
Confidence 986
No 15
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.8e-61 Score=480.05 Aligned_cols=428 Identities=26% Similarity=0.478 Sum_probs=322.6
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCCCCCCC-------C---CC--CCCceEEEcCCCCCCCCCCCCh-
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNG--FSITVVHTHFNPPN-------P---SN--HPEFNFQSIPDGLTADDVSTGI- 65 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~G--h~Vt~~~~~~~~~~-------~---~~--~~~~~~~~l~~~~~~~~~~~~~- 65 (445)
|+++|+|++||++|++.||+.|+.+| ..|||++++.+... . .. .++++++.+|+..++......+
T Consensus 5 vvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~~ 84 (481)
T PLN02554 5 LVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTTEDPTFQ 84 (481)
T ss_pred EEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCcccchHHH
Confidence 68999999999999999999999998 88999999765431 1 11 2369999999765422111122
Q ss_pred hHHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhh
Q 013342 66 NILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHL 145 (445)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 145 (445)
.++ ..+...+.+.++++..... .+.+. +++|||+|.++.|+..+|+++|||++.++++.+...+.+.+.+..
T Consensus 85 ~~~------~~~~~~~~~~l~~l~~~~~-~~~~~-pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~ 156 (481)
T PLN02554 85 SYI------DNQKPKVRDAVAKLVDDSS-TPSSP-RLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQML 156 (481)
T ss_pred HHH------HHHHHHHHHHHHHHHhhhc-cCCCC-CeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhh
Confidence 222 3445555555655543210 00001 348999999999999999999999999999999998887765432
Q ss_pred hhcCCCCCC--CCCCCCcCCCCCC-CCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhc-
Q 013342 146 EEEGSSPLQ--DPNKLQDPVPGLH-PLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQ- 220 (445)
Q Consensus 146 ~~~~~~p~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~- 220 (445)
....-.+.. ........+|++. .++..+++..... +...+.+.. ...+..++.+++||+.+||......++..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~ 234 (481)
T PLN02554 157 YDEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLLS--KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSS 234 (481)
T ss_pred ccccccCccccCCCCceeECCCCCCCCCHHHCCCcccC--HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcc
Confidence 211101111 0011112367763 5677777754322 122333444 55677899999999999999888888763
Q ss_pred -cCCCceeeccCCC-CCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECC
Q 013342 221 -CQVPIFPIGPFHK-FAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRP 298 (445)
Q Consensus 221 -~~~~~~~vGp~~~-~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~ 298 (445)
..++++.|||+.. ..+.. ....+.++++.+||+.++++++|||||||+..++.+++++++.||++++++|||+++.
T Consensus 235 ~~~~~v~~vGpl~~~~~~~~--~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~ 312 (481)
T PLN02554 235 GDLPPVYPVGPVLHLENSGD--DSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRR 312 (481)
T ss_pred cCCCCEEEeCCCcccccccc--ccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcC
Confidence 2268999999943 22210 0001223469999998888899999999998899999999999999999999999975
Q ss_pred CCC------CCC--CccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccch
Q 013342 299 SSN------NAP--EGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQ 370 (445)
Q Consensus 299 ~~~------~~~--~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ 370 (445)
... .+. .....+|+++.++.++|+++++|+||.+||.|+++++|||||||||++|++++|||||++|+++||
T Consensus 313 ~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ 392 (481)
T PLN02554 313 ASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQ 392 (481)
T ss_pred CcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccc
Confidence 311 000 001236889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHH-HHHhhheeeeEeC------------cccCHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 013342 371 RVNAR-YVSHVWRTGLELE------------NELEREVVEKAVRRLMV-GEEGEEMRQRAKNLKEEIELCITEGGSSYKS 436 (445)
Q Consensus 371 ~~na~-~v~~~~G~g~~~~------------~~~t~~~l~~ai~~ll~-~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 436 (445)
+.||+ ++++ +|+|+.++ ..++.++|+++|+++|+ | ++||+||+++++++++++.+||++.++
T Consensus 393 ~~Na~~~v~~-~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~---~~~r~~a~~l~~~~~~av~~gGss~~~ 468 (481)
T PLN02554 393 KFNAFEMVEE-LGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD---SDVRKRVKEMSEKCHVALMDGGSSHTA 468 (481)
T ss_pred hhhHHHHHHH-hCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCChHHHH
Confidence 99995 5778 79999985 15899999999999997 6 899999999999999999999999999
Q ss_pred HHHHHHHh
Q 013342 437 LNEFLEFI 444 (445)
Q Consensus 437 ~~~~~~~~ 444 (445)
+++|++++
T Consensus 469 l~~lv~~~ 476 (481)
T PLN02554 469 LKKFIQDV 476 (481)
T ss_pred HHHHHHHH
Confidence 99999986
No 16
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.7e-61 Score=475.72 Aligned_cols=427 Identities=29% Similarity=0.479 Sum_probs=317.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC------C--CCCceEEEcC-----CCCCCCCCCC-Ch-
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPS------N--HPEFNFQSIP-----DGLTADDVST-GI- 65 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~------~--~~~~~~~~l~-----~~~~~~~~~~-~~- 65 (445)
++++|+|++||++|++.||+.|+.+|+.|||++++.+..... . ...++|+.+| +++|++...+ ++
T Consensus 11 vv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~~~~~ 90 (491)
T PLN02534 11 FVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENLDTLP 90 (491)
T ss_pred EEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccccccCC
Confidence 589999999999999999999999999999999987653211 1 1138999998 5777654333 22
Q ss_pred --hHHHHHHHH---HhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHH
Q 013342 66 --NILITNLLN---VNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRL 140 (445)
Q Consensus 66 --~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 140 (445)
.++. .+. ..+...+.+++... . . +++|||+|.++.|+..+|+++|||.+.+++++++....+.
T Consensus 91 ~~~~~~--~~~~~~~~l~~~l~~lL~~~---~------~-pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~ 158 (491)
T PLN02534 91 SRDLLR--KFYDAVDKLQQPLERFLEQA---K------P-PPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSH 158 (491)
T ss_pred cHHHHH--HHHHHHHHhHHHHHHHHHhc---C------C-CCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHH
Confidence 2333 222 23444444444432 1 2 6899999999999999999999999999999988876553
Q ss_pred hhhhhhhcCCCCCCCCCCCCcCCCCCCC---CCCCCCCCcccccchHHHHHHHH-hh-hccCCcEEEEcchhhhcHHHHH
Q 013342 141 ALLHLEEEGSSPLQDPNKLQDPVPGLHP---LRFKDLPTYRHEIMEHYLQLITS-MY-KIRTSSAVIWNTMHYLEESSLA 215 (445)
Q Consensus 141 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~n~~~~le~~~~~ 215 (445)
.+... ....+... ......+|+++. ++..+++...... . ....+.. +. ....++.+++|||.+||+..++
T Consensus 159 ~~~~~--~~~~~~~~-~~~~~~iPg~p~~~~l~~~dlp~~~~~~-~-~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~ 233 (491)
T PLN02534 159 NIRLH--NAHLSVSS-DSEPFVVPGMPQSIEITRAQLPGAFVSL-P-DLDDVRNKMREAESTAFGVVVNSFNELEHGCAE 233 (491)
T ss_pred HHHHh--cccccCCC-CCceeecCCCCccccccHHHCChhhcCc-c-cHHHHHHHHHhhcccCCEEEEecHHHhhHHHHH
Confidence 32111 11111111 111123566542 5666666532111 1 1122222 22 2345779999999999999999
Q ss_pred HHHhccCCCceeeccCCCCCCCCC---CCC-CcC-CCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCC
Q 013342 216 QLQQQCQVPIFPIGPFHKFAPFST---SCN-FLN-EDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQ 290 (445)
Q Consensus 216 ~~~~~~~~~~~~vGp~~~~~~~~~---~~~-~~~-~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 290 (445)
.++..++++++.|||+........ ... ... .+++|.+|||.+++++||||||||.....++++.+++.||+.++.
T Consensus 234 ~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~ 313 (491)
T PLN02534 234 AYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKK 313 (491)
T ss_pred HHHhhcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCC
Confidence 998877678999999975321100 000 011 234699999998889999999999999999999999999999999
Q ss_pred CEEEEECCCCCCCCCccCCchHHHHHHhc-CCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccc
Q 013342 291 PFLWVIRPSSNNAPEGIDLLPEVLAEAVQ-ENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGD 369 (445)
Q Consensus 291 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~D 369 (445)
+|||+++.+..........+|+++.++.. .++++.+|+||.++|+|++++|||||||+||++||+++|||||++|++.|
T Consensus 314 ~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~d 393 (491)
T PLN02534 314 PFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAE 393 (491)
T ss_pred CEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEecccccc
Confidence 99999974311110001135788887754 55556699999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHhhheeeeEeC-------------c-ccCHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHHHhcCCCh
Q 013342 370 QRVNARYVSHVWRTGLELE-------------N-ELEREVVEKAVRRLMV--GEEGEEMRQRAKNLKEEIELCITEGGSS 433 (445)
Q Consensus 370 Q~~na~~v~~~~G~g~~~~-------------~-~~t~~~l~~ai~~ll~--~~~~~~~~~~a~~l~~~~~~~~~~~g~~ 433 (445)
|+.||+++++.||+|+.+. . .+++++|+++|+++|. +++|+.+|+||++|++++++++.+|||+
T Consensus 394 q~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS 473 (491)
T PLN02534 394 QFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSS 473 (491)
T ss_pred HHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 9999999976689999873 1 2799999999999997 4568999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 013342 434 YKSLNEFLEFI 444 (445)
Q Consensus 434 ~~~~~~~~~~~ 444 (445)
.+++++|++++
T Consensus 474 ~~nl~~fv~~i 484 (491)
T PLN02534 474 HINLSILIQDV 484 (491)
T ss_pred HHHHHHHHHHH
Confidence 99999999986
No 17
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=3.6e-61 Score=478.64 Aligned_cols=427 Identities=29% Similarity=0.469 Sum_probs=312.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC--------CC----CceEEEcC---CCCCCCCCCC--
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSN--------HP----EFNFQSIP---DGLTADDVST-- 63 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~--------~~----~~~~~~l~---~~~~~~~~~~-- 63 (445)
|+++|+|++||++|++.||+.|++||++|||++++.+...+.. .+ .+.+.++| ++++++....
T Consensus 8 Vvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~~~~ 87 (482)
T PLN03007 8 ILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCENVDF 87 (482)
T ss_pred EEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCcccccc
Confidence 6899999999999999999999999999999999866532110 11 34445555 3555432211
Q ss_pred -------Ch-hHHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHH
Q 013342 64 -------GI-NILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAAT 135 (445)
Q Consensus 64 -------~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~ 135 (445)
.. .++. .+. ...+.+.+.++++.+.. ++|+||+|.++.|+..+|+++|||++.+++++++.
T Consensus 88 ~~~~~~~~~~~~~~--~~~-~~~~~l~~~l~~~l~~~--------~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~ 156 (482)
T PLN03007 88 ITSNNNDDSGDLFL--KFL-FSTKYFKDQLEKLLETT--------RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFS 156 (482)
T ss_pred cccccccchHHHHH--HHH-HHHHHHHHHHHHHHhcC--------CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHH
Confidence 12 2333 332 33344455555555432 78999999999999999999999999999998877
Q ss_pred HHHHHhhhhhhhcCCCCCCCCCCCCcCCCCCC---CCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcH
Q 013342 136 QISRLALLHLEEEGSSPLQDPNKLQDPVPGLH---PLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEE 211 (445)
Q Consensus 136 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~ 211 (445)
...+.......+....+... . ...+|+++ .++..+++.. ............ .....+.+.+++||+.+||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~-~--~~~~pg~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~ 231 (482)
T PLN03007 157 LCASYCIRVHKPQKKVASSS-E--PFVIPDLPGDIVITEEQINDA--DEESPMGKFMKEVRESEVKSFGVLVNSFYELES 231 (482)
T ss_pred HHHHHHHHhcccccccCCCC-c--eeeCCCCCCccccCHHhcCCC--CCchhHHHHHHHHHhhcccCCEEEEECHHHHHH
Confidence 76554332111111111000 0 11245543 2233333321 122222333333 45667889999999999999
Q ss_pred HHHHHHHhccCCCceeeccCCCCCCCC-----CCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHH
Q 013342 212 SSLAQLQQQCQVPIFPIGPFHKFAPFS-----TSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLV 286 (445)
Q Consensus 212 ~~~~~~~~~~~~~~~~vGp~~~~~~~~-----~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~ 286 (445)
+..+.+++..+.++++|||+....... ........+++|.+||+.++++++|||||||+...+.+.+.+++.+|+
T Consensus 232 ~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~ 311 (482)
T PLN03007 232 AYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLE 311 (482)
T ss_pred HHHHHHHhccCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHH
Confidence 988888876666899999986432210 000111123568999998888999999999998888899999999999
Q ss_pred hCCCCEEEEECCCCCCCCCccCCchHHHHHHhc-CCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCC
Q 013342 287 NSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ-ENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRP 365 (445)
Q Consensus 287 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P 365 (445)
.++.+|||+++.....+ +..+.+|+++.++.. .|+++.+|+||.+||+|+++++||||||+||++||+++|||||++|
T Consensus 312 ~~~~~flw~~~~~~~~~-~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P 390 (482)
T PLN03007 312 GSGQNFIWVVRKNENQG-EKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWP 390 (482)
T ss_pred HCCCCEEEEEecCCccc-chhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeecc
Confidence 99999999997542111 112347889888765 5566669999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHhhheeeeEe--------Cc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 013342 366 CFGDQRVNARYVSHVWRTGLEL--------EN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKS 436 (445)
Q Consensus 366 ~~~DQ~~na~~v~~~~G~g~~~--------~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 436 (445)
+++||+.||+++++.+++|+.+ +. .+++++|+++|+++|.|++|++||+||+++++.+++++.+||++.++
T Consensus 391 ~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~ 470 (482)
T PLN03007 391 VGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFND 470 (482)
T ss_pred chhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999987434555443 33 68999999999999999777899999999999999999999999999
Q ss_pred HHHHHHHh
Q 013342 437 LNEFLEFI 444 (445)
Q Consensus 437 ~~~~~~~~ 444 (445)
+++|++.+
T Consensus 471 l~~~v~~~ 478 (482)
T PLN03007 471 LNKFMEEL 478 (482)
T ss_pred HHHHHHHH
Confidence 99999876
No 18
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=3.8e-61 Score=469.92 Aligned_cols=408 Identities=21% Similarity=0.315 Sum_probs=303.2
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCceEEEc--C--CCCCCCCCCC-Ch-hHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSN----HPEFNFQSI--P--DGLTADDVST-GI-NILIT 70 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~----~~~~~~~~l--~--~~~~~~~~~~-~~-~~~~~ 70 (445)
++++|+|++||++|++.||+.|+++||+|||++++.+...+.. ..++.+..+ + ++++++...+ ++ ..+.
T Consensus 7 vv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp~g~~~~~~l~~~l~- 85 (442)
T PLN02208 7 AFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLPAGAETTSDIPISMD- 85 (442)
T ss_pred EEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCCCCcccccchhHHHH-
Confidence 5899999999999999999999999999999998755433211 124556654 3 4566554323 33 2222
Q ss_pred HHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCC
Q 013342 71 NLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGS 150 (445)
Q Consensus 71 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 150 (445)
.+.....+.+.+.++.+.+.. ++||||+| ++.|+..+|+++|||++.++++.+.... +.+.+. ..
T Consensus 86 -~~~~~~~~~~~~~l~~~L~~~--------~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~----~~ 150 (442)
T PLN02208 86 -NLLSEALDLTRDQVEAAVRAL--------RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG----GK 150 (442)
T ss_pred -HHHHHHHHHHHHHHHHHHhhC--------CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc----cc
Confidence 221222223333344443321 78999999 6789999999999999999999987654 333211 00
Q ss_pred CCCCCCCCCCcCCCCCCC----CCCCCCCCcccccchHHHHHHHH--hhhccCCcEEEEcchhhhcHHHHHHHHhccCCC
Q 013342 151 SPLQDPNKLQDPVPGLHP----LRFKDLPTYRHEIMEHYLQLITS--MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVP 224 (445)
Q Consensus 151 ~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~ 224 (445)
. ...+|+++. ++..+++.+ ...+...+.+.. .....+++.+++|||.+||+..++.+++.++++
T Consensus 151 ~--------~~~~pglp~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~ 220 (442)
T PLN02208 151 L--------GVPPPGYPSSKVLFRENDAHAL--ATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKK 220 (442)
T ss_pred c--------CCCCCCCCCcccccCHHHcCcc--cccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCC
Confidence 0 011344432 344455533 112222232222 245567899999999999999999888866688
Q ss_pred ceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCC
Q 013342 225 IFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAP 304 (445)
Q Consensus 225 ~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~ 304 (445)
++.|||++..... .-+.++++.+|||++++++||||||||+..++.+++.+++.+++..+.+++|+++.+...+
T Consensus 221 v~~vGpl~~~~~~-----~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~- 294 (442)
T PLN02208 221 VLLTGPMFPEPDT-----SKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSS- 294 (442)
T ss_pred EEEEeecccCcCC-----CCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccc-
Confidence 9999999865321 0112356999999888899999999999988999999999998888899999987431111
Q ss_pred CccCCchHHHHHHhcCCc-EEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhhee
Q 013342 305 EGIDLLPEVLAEAVQENG-CIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRT 383 (445)
Q Consensus 305 ~~~~~~~~~~~~~~~~n~-~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 383 (445)
+..+.+|++|+++..++. ++.+|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++.+.+|+
T Consensus 295 ~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~ 374 (442)
T PLN02208 295 TVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEV 374 (442)
T ss_pred chhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhce
Confidence 112358899998877554 4459999999999999999999999999999999999999999999999999987654799
Q ss_pred eeEeCc-c---cCHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 384 GLELEN-E---LEREVVEKAVRRLMVGE--EGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 384 g~~~~~-~---~t~~~l~~ai~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
|+.++. + ++.++|+++|+++|+|+ +|+.+|++|+++++++.+ +|++.+++++|++++
T Consensus 375 gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~----~gsS~~~l~~~v~~l 437 (442)
T PLN02208 375 SVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVS----PGLLTGYVDKFVEEL 437 (442)
T ss_pred eEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHH
Confidence 999976 4 89999999999999874 378899999999999854 489999999999986
No 19
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=8.8e-61 Score=464.73 Aligned_cols=408 Identities=23% Similarity=0.366 Sum_probs=311.9
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC---CC---CceEEEcC--CCCCCCCCCC-Ch--hHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSN---HP---EFNFQSIP--DGLTADDVST-GI--NILI 69 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~---~~---~~~~~~l~--~~~~~~~~~~-~~--~~~~ 69 (445)
|+++|+|++||++|++.||+.|+.+|+.|||++++.+...... .+ .+.+..+| ++++++.+.. ++ ....
T Consensus 8 vvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~~~~~~ 87 (453)
T PLN02764 8 VLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPVGTETVSEIPVTSAD 87 (453)
T ss_pred EEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCCcccccccCChhHHH
Confidence 6899999999999999999999999999999999876433211 11 26777787 6776654332 22 2222
Q ss_pred -HHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhc
Q 013342 70 -TNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEE 148 (445)
Q Consensus 70 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 148 (445)
+......+...+.++++.. ++||||+|. ..|+..+|+++|||.+.++++.+.....+.. +.
T Consensus 88 ~~~~a~~~~~~~~~~~l~~~------------~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~---- 149 (453)
T PLN02764 88 LLMSAMDLTRDQVEVVVRAV------------EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-PG---- 149 (453)
T ss_pred HHHHHHHHhHHHHHHHHHhC------------CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-cc----
Confidence 0022234455555555543 679999994 8899999999999999999999987776642 11
Q ss_pred CCCCCCCCCCCCcCCCCCC----CCCCCCCCCccc----ccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHh
Q 013342 149 GSSPLQDPNKLQDPVPGLH----PLRFKDLPTYRH----EIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQ 219 (445)
Q Consensus 149 ~~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~ 219 (445)
...+ ..+|+++ .++..+++.+.. ...+.....+.. ......++.+++|||.+||+..++.++.
T Consensus 150 ~~~~--------~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~ 221 (453)
T PLN02764 150 GELG--------VPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEK 221 (453)
T ss_pred ccCC--------CCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHh
Confidence 0000 1124443 134444443211 111112223333 3556778999999999999999998877
Q ss_pred ccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCC
Q 013342 220 QCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPS 299 (445)
Q Consensus 220 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~ 299 (445)
..+++++.|||+...... .. ..++++.+|||.+++++||||||||+..++.+++.+++.+|+..+.+++|+++.+
T Consensus 222 ~~~~~v~~VGPL~~~~~~---~~--~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~ 296 (453)
T PLN02764 222 HCRKKVLLTGPVFPEPDK---TR--ELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPP 296 (453)
T ss_pred hcCCcEEEeccCccCccc---cc--cchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 555689999999754311 01 1235699999999999999999999999999999999999999999999999853
Q ss_pred CCCCCCccCCchHHHHHHhcCCcEEE-EeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHH
Q 013342 300 SNNAPEGIDLLPEVLAEAVQENGCIV-KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVS 378 (445)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~ 378 (445)
...+.. .+.+|++|+++..++++++ +|+||.+||+|+++++|||||||||++|++++|||||++|++.||+.||++++
T Consensus 297 ~~~~~~-~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~ 375 (453)
T PLN02764 297 RGSSTI-QEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLS 375 (453)
T ss_pred CCCcch-hhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHH
Confidence 211111 2458999999988887776 99999999999999999999999999999999999999999999999999996
Q ss_pred hhheeeeEeCc----ccCHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 379 HVWRTGLELEN----ELEREVVEKAVRRLMVG--EEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 379 ~~~G~g~~~~~----~~t~~~l~~ai~~ll~~--~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+.+|+|+.+.. .++.++|+++|+++|++ ++|+.+|++|+++++++++. |++.+++++|++++
T Consensus 376 ~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~----GSS~~~l~~lv~~~ 443 (453)
T PLN02764 376 DELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASP----GLLTGYVDNFIESL 443 (453)
T ss_pred HHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhc----CCHHHHHHHHHHHH
Confidence 44799999843 48999999999999987 34788999999999999776 99999999999986
No 20
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.1e-60 Score=471.79 Aligned_cols=434 Identities=24% Similarity=0.395 Sum_probs=320.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCC---eEEEEeCCCCCC---C------CCCCCCceEEEcCCCCCC-CCCC-C-Ch
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGF---SITVVHTHFNPP---N------PSNHPEFNFQSIPDGLTA-DDVS-T-GI 65 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh---~Vt~~~~~~~~~---~------~~~~~~~~~~~l~~~~~~-~~~~-~-~~ 65 (445)
|+++|+|++||++|++.||+.|+.+|. .||++++..+.. . ....++++|+.+|+...+ .... . ..
T Consensus 6 Vv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~~~~~~~~ 85 (475)
T PLN02167 6 LIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQDPPPMELFVKAS 85 (475)
T ss_pred EEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCCCCccccccccch
Confidence 689999999999999999999999983 567766543221 0 111246999999965422 1111 1 22
Q ss_pred -hHHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhh
Q 013342 66 -NILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLH 144 (445)
Q Consensus 66 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 144 (445)
..+. .+...+...+.+.++++..... ..+.-+++|||+|.++.|+..+|+++|||.+.++++.+...+.+.+.+.
T Consensus 86 ~~~~~--~~~~~~~~~l~~~l~~l~~~~~--~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~ 161 (475)
T PLN02167 86 EAYIL--EFVKKMVPLVRDALSTLVSSRD--ESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPE 161 (475)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHhhcc--ccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHH
Confidence 2333 3445666667777776643210 0001035999999999999999999999999999999988877765433
Q ss_pred hhhcCCCCCCCCC-CCCcCCCCC-CCCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhcc
Q 013342 145 LEEEGSSPLQDPN-KLQDPVPGL-HPLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQC 221 (445)
Q Consensus 145 ~~~~~~~p~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~ 221 (445)
............. .-...+|++ ..++..+++....... ....+.. .....+++.+++|||.+||+..++.++...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~ 239 (475)
T PLN02167 162 RHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMKE--SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLP 239 (475)
T ss_pred hccccccccccCCCCCeeECCCCCCCCChhhCchhhhCcc--hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhc
Confidence 1111000000000 111236776 3466777765332211 1222333 555677899999999999999999887631
Q ss_pred --CCCceeeccCCCCCCCCCCCCCc-CCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECC
Q 013342 222 --QVPIFPIGPFHKFAPFSTSCNFL-NEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRP 298 (445)
Q Consensus 222 --~~~~~~vGp~~~~~~~~~~~~~~-~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~ 298 (445)
-++++.|||++...... ..... ..+.++.+||+.++++++|||||||+..++.+++++++.+|+.++.+|||+++.
T Consensus 240 ~~~p~v~~vGpl~~~~~~~-~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~ 318 (475)
T PLN02167 240 ENYPPVYPVGPILSLKDRT-SPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRT 318 (475)
T ss_pred ccCCeeEEecccccccccc-CCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEec
Confidence 16799999998643210 00111 123469999998888999999999998889999999999999999999999975
Q ss_pred CCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHH-H
Q 013342 299 SSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARY-V 377 (445)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~-v 377 (445)
+.....+..+.+|+++.++..+++++++|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||++ +
T Consensus 319 ~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~ 398 (475)
T PLN02167 319 NPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMV 398 (475)
T ss_pred CcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHH
Confidence 321100112347899999999999999999999999999999999999999999999999999999999999999976 6
Q ss_pred HhhheeeeEeCc--------ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 378 SHVWRTGLELEN--------ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 378 ~~~~G~g~~~~~--------~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
++ +|+|+.+.. .+++++|+++|+++|+++ +.||+||+++++++++++.+||++.+++++|++++
T Consensus 399 ~~-~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i 470 (475)
T PLN02167 399 KE-LGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDL 470 (475)
T ss_pred HH-hCeeEEeecccccccCCcccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 67 799998842 469999999999999863 58999999999999999999999999999999986
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.4e-60 Score=466.47 Aligned_cols=408 Identities=22% Similarity=0.302 Sum_probs=303.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----CCCCceEEEcC----CCCCCCCCCC-Ch-hHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPS----NHPEFNFQSIP----DGLTADDVST-GI-NILIT 70 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~----~~~~~~~~~l~----~~~~~~~~~~-~~-~~~~~ 70 (445)
|+++|+|++||++|++.||+.|+++|++|||++++.+...+. ..+++.|..++ ++++++.... ++ ..+.
T Consensus 7 VvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~~~~l~~~~~- 85 (446)
T PLN00414 7 AFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGAETASDLPNSTK- 85 (446)
T ss_pred EEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcccccccchhhHH-
Confidence 589999999999999999999999999999999976543321 11257885554 5666654333 33 2112
Q ss_pred HHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCC
Q 013342 71 NLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGS 150 (445)
Q Consensus 71 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 150 (445)
.........+.+.++.+.+.. +|||||+|. +.|+..+|+++|||++.++++.+.....+.+ +.. ....
T Consensus 86 -~~~~~a~~~l~~~l~~~L~~~--------~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~-~~~-~~~~ 153 (446)
T PLN00414 86 -KPIFDAMDLLRDQIEAKVRAL--------KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLA-PRA-ELGF 153 (446)
T ss_pred -HHHHHHHHHHHHHHHHHHhcC--------CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhC-cHh-hcCC
Confidence 122222223444444444321 789999994 8999999999999999999999988776654 110 0000
Q ss_pred CCCCCCCCCCcCCCCCCC----CCCCC--CCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhccCC
Q 013342 151 SPLQDPNKLQDPVPGLHP----LRFKD--LPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQV 223 (445)
Q Consensus 151 ~p~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~ 223 (445)
.+|+++. ++..+ ++.+... ....+.+ .....+++.+++|||.+||+...+.++..+++
T Consensus 154 -----------~~pg~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~ 218 (446)
T PLN00414 154 -----------PPPDYPLSKVALRGHDANVCSLFAN----SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQR 218 (446)
T ss_pred -----------CCCCCCCCcCcCchhhcccchhhcc----cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCC
Confidence 1222221 11111 1111111 1122333 44556789999999999999999988886667
Q ss_pred CceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCC
Q 013342 224 PIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNA 303 (445)
Q Consensus 224 ~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~ 303 (445)
+++.|||+...... ......++++.+|||.+++++||||||||+...+.+++.+++.+|+..+.+|+|++......+
T Consensus 219 ~v~~VGPl~~~~~~---~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~ 295 (446)
T PLN00414 219 KVLLTGPMLPEPQN---KSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSS 295 (446)
T ss_pred CeEEEcccCCCccc---ccCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcc
Confidence 89999999753321 001112346899999999999999999999999999999999999999999999997532111
Q ss_pred CCccCCchHHHHHHhcCCcEEE-EeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhhe
Q 013342 304 PEGIDLLPEVLAEAVQENGCIV-KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWR 382 (445)
Q Consensus 304 ~~~~~~~~~~~~~~~~~n~~~~-~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G 382 (445)
. ..+.+|++|+++..++++++ +|+||.+||+|+++++|||||||||++|++++|||||++|++.||+.||+++++.+|
T Consensus 296 ~-~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g 374 (446)
T PLN00414 296 T-VQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELE 374 (446)
T ss_pred c-chhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhC
Confidence 1 12458999999999998887 999999999999999999999999999999999999999999999999999964379
Q ss_pred eeeEeCc----ccCHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 383 TGLELEN----ELEREVVEKAVRRLMVGE--EGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 383 ~g~~~~~----~~t~~~l~~ai~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+|+.+.. .+++++|+++|+++|+|+ +|+.||++|+++++.+.+. || +...+++|++++
T Consensus 375 ~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~---gg-~ss~l~~~v~~~ 438 (446)
T PLN00414 375 VSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSP---GL-LSGYADKFVEAL 438 (446)
T ss_pred eEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcC---CC-cHHHHHHHHHHH
Confidence 9999964 389999999999999863 3778999999999997544 44 335589999875
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=6e-51 Score=405.91 Aligned_cols=386 Identities=15% Similarity=0.131 Sum_probs=271.1
Q ss_pred EEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCC---CCC----CCC-----CCC-Ch---
Q 013342 3 LVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN-PSNHPEFNFQSIPD---GLT----ADD-----VST-GI--- 65 (445)
Q Consensus 3 ~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-~~~~~~~~~~~l~~---~~~----~~~-----~~~-~~--- 65 (445)
++|.++.||+.-+.+|+++|++|||+||++++...... ..+..++..+.++. ... ... ... +.
T Consensus 26 ~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (507)
T PHA03392 26 VFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVYYASHLCGNITEIDASLSVEYFKKLVKSSAVFRKRGVVADSSTV 105 (507)
T ss_pred EcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccccccCCCCCEEEEEcCCChHHHHHHHhhhhHHHhhhhhhhHHHH
Confidence 44779999999999999999999999999988532111 11334666666541 100 000 000 11
Q ss_pred --hHHHHHHHHHhcchHHHH-HHHHHHh-hccCCCCCCCCceEEEEcCCCCchHHHHHHh-CCceEEEccchHHHHHHHH
Q 013342 66 --NILITNLLNVNCQAPFFE-CMVRMME-QQQQHPAGDDQIACIIYDEIFYFPEAAANQL-NLQSIILRTTSAATQISRL 140 (445)
Q Consensus 66 --~~~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~-giP~v~~~~~~~~~~~~~~ 140 (445)
.... .+...|...+.+ .+.++++ .. . +||+||+|.+..|+..+|+.+ ++|.|.+++..........
T Consensus 106 ~~~~~~--~~~~~~~~~l~~~~~~~~L~~~~------~-kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~ 176 (507)
T PHA03392 106 TADNYM--GLVRMISDQFDLPNVKNLIANKN------N-KFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFET 176 (507)
T ss_pred HHHHHH--HHHHHHHHHHCCHHHHHHHhcCC------C-ceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHHh
Confidence 1112 223455555543 3334433 11 2 899999998889999999999 9999888886554333222
Q ss_pred hhhhhhhcCCCCCCCC-----CCCCcCCCCCCCCCCCCCC-CcccccchHH-HHHHHH-----hhhccCCcEEEEcchhh
Q 013342 141 ALLHLEEEGSSPLQDP-----NKLQDPVPGLHPLRFKDLP-TYRHEIMEHY-LQLITS-----MYKIRTSSAVIWNTMHY 208 (445)
Q Consensus 141 ~~~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~-----~~~~~~~~~~l~n~~~~ 208 (445)
..+.+.+++|.|.... +.+..++.++.......+. .......+.. .+.++. .+..++.+.+++|+.+.
T Consensus 177 ~gg~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~ 256 (507)
T PHA03392 177 MGAVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPV 256 (507)
T ss_pred hccCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCcc
Confidence 2125556677775331 2222333332100000000 0000111111 122111 23446789999999999
Q ss_pred hcHHHHHHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEeccccc---CChhhHHHHHHHH
Q 013342 209 LEESSLAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVAS---MDKKEPEEMAWGL 285 (445)
Q Consensus 209 le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~---~~~~~~~~~~~al 285 (445)
+|+| |+ +++++++|||++.++.. ..+.++++.+|++. .++++||+||||+.. ++.+.++.+++|+
T Consensus 257 ~d~~-----rp-~~p~v~~vGgi~~~~~~-----~~~l~~~l~~fl~~-~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~ 324 (507)
T PHA03392 257 FDNN-----RP-VPPSVQYLGGLHLHKKP-----PQPLDDYLEEFLNN-STNGVVYVSFGSSIDTNDMDNEFLQMLLRTF 324 (507)
T ss_pred ccCC-----CC-CCCCeeeecccccCCCC-----CCCCCHHHHHHHhc-CCCcEEEEECCCCCcCCCCCHHHHHHHHHHH
Confidence 9997 33 77999999999975422 11234558999985 456899999999864 4678899999999
Q ss_pred HhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCC
Q 013342 286 VNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRP 365 (445)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P 365 (445)
++++.++||+++... .+ ...++|+++++|+||.++|+|+.+++||||||+||++||+++|||+|++|
T Consensus 325 ~~l~~~viw~~~~~~---------~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP 391 (507)
T PHA03392 325 KKLPYNVLWKYDGEV---------EA----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLP 391 (507)
T ss_pred HhCCCeEEEEECCCc---------Cc----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECC
Confidence 999999999985321 11 12467889999999999999988888999999999999999999999999
Q ss_pred cccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 366 CFGDQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 366 ~~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
+++||+.||+|+++ +|+|+.+++ ++++++|++||+++++| ++|++||+++++.+++.
T Consensus 392 ~~~DQ~~Na~rv~~-~G~G~~l~~~~~t~~~l~~ai~~vl~~---~~y~~~a~~ls~~~~~~ 449 (507)
T PHA03392 392 MMGDQFYNTNKYVE-LGIGRALDTVTVSAAQLVLAIVDVIEN---PKYRKNLKELRHLIRHQ 449 (507)
T ss_pred CCccHHHHHHHHHH-cCcEEEeccCCcCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHhC
Confidence 99999999999999 599999998 89999999999999999 99999999999999974
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=3.6e-52 Score=421.61 Aligned_cols=385 Identities=24% Similarity=0.335 Sum_probs=228.9
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCCCCCCCCCCC---Ch-----------
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN-PSNHPEFNFQSIPDGLTADDVST---GI----------- 65 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~---~~----------- 65 (445)
|+++| .++||+.++..|+++|++|||+||++++...... .....++++..++...+...... +.
T Consensus 3 vLv~p-~~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (500)
T PF00201_consen 3 VLVFP-MAYSHFIFMRPLAEELAERGHNVTVLTPSPSSSLNPSKPSNIRFETYPDPYPEEEFEEIFPEFISKFFSESSFA 81 (500)
T ss_dssp ----------SHHHHHHHHHHHHHH-TTSEEEHHHHHHT------S-CCEEEE-----TT------TTHHHHHHHHHCCH
T ss_pred EEEeC-CCcCHHHHHHHHHHHHHhcCCceEEEEeecccccccccccceeeEEEcCCcchHHHhhhhHHHHHHHhhhcccc
Confidence 35555 4889999999999999999999999998532211 12334677777764443221110 10
Q ss_pred ----hHHH-----HHHHHHhcchHHH--HHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHH
Q 013342 66 ----NILI-----TNLLNVNCQAPFF--ECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAA 134 (445)
Q Consensus 66 ----~~~~-----~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~ 134 (445)
..+. ...+...|...+. ++++.+.+. ++|++|+|.+..|+..+|+.+++|.+.+.++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~~---------~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~ 152 (500)
T PF00201_consen 82 NSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKSE---------KFDLVISDAFDPCGLALAHYLGIPVIIISSSTPM 152 (500)
T ss_dssp HHHHHHHHHHHCHHHS----E--EEEETTSTTHHHHH---------HHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh---------ccccceEeeccchhHHHHHHhcCCeEEEeccccc
Confidence 0110 0011122322221 122333221 8999999998899999999999999876544322
Q ss_pred HHHHHHhhhhhhhcCCCCCCCC-----CCCCcCCCCCCCC-CCCCCCCcccccchHHH-HHHH---H-hhhccCCcEEEE
Q 013342 135 TQISRLALLHLEEEGSSPLQDP-----NKLQDPVPGLHPL-RFKDLPTYRHEIMEHYL-QLIT---S-MYKIRTSSAVIW 203 (445)
Q Consensus 135 ~~~~~~~~~~~~~~~~~p~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~---~-~~~~~~~~~~l~ 203 (445)
..........+.+++|.|.... ..+..++.++... ....+........+... +.+. . .+.+.+.+.+++
T Consensus 153 ~~~~~~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 232 (500)
T PF00201_consen 153 YDLSSFSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLI 232 (500)
T ss_dssp SCCTCCTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCS
T ss_pred chhhhhccCCCCChHHhccccccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhcccccccHHHHHHHHHHhh
Confidence 1111111122334555554321 1112222221100 00000000000000000 0000 0 223345677889
Q ss_pred cchhhhcHHHHHHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEeccccc-CChhhHHHHH
Q 013342 204 NTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVAS-MDKKEPEEMA 282 (445)
Q Consensus 204 n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~ 282 (445)
|+.+.+++|. + +.+++++||+++..++. ++ +.++..|++...++++|||||||+.. ++.+..+.++
T Consensus 233 ns~~~ld~pr-----p-~~p~v~~vGgl~~~~~~-----~l--~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~ 299 (500)
T PF00201_consen 233 NSHPSLDFPR-----P-LLPNVVEVGGLHIKPAK-----PL--PEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIA 299 (500)
T ss_dssp STEEE----H-----H-HHCTSTTGCGC-S---------TC--HHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHH
T ss_pred hccccCcCCc-----c-hhhcccccCcccccccc-----cc--ccccchhhhccCCCCEEEEecCcccchhHHHHHHHHH
Confidence 9999999874 4 44899999999976554 23 34588899854688999999999987 4444578899
Q ss_pred HHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcc
Q 013342 283 WGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMI 362 (445)
Q Consensus 283 ~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v 362 (445)
++|++++++|||++++. .+.+ .++|+++++|+||.+||.|+++++||||||+||++||+++|||||
T Consensus 300 ~~~~~~~~~~iW~~~~~----------~~~~----l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l 365 (500)
T PF00201_consen 300 EAFENLPQRFIWKYEGE----------PPEN----LPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPML 365 (500)
T ss_dssp HHHHCSTTEEEEEETCS----------HGCH----HHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EE
T ss_pred HHHhhCCCccccccccc----------cccc----ccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCcc
Confidence 99999999999999432 2222 468899999999999999999999999999999999999999999
Q ss_pred cCCcccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 363 CRPCFGDQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 363 ~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
++|+++||+.||+++++. |+|+.++. ++|.++|.+||+++|+| ++|++||+++++.+++.
T Consensus 366 ~~P~~~DQ~~na~~~~~~-G~g~~l~~~~~~~~~l~~ai~~vl~~---~~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 366 GIPLFGDQPRNAARVEEK-GVGVVLDKNDLTEEELRAAIREVLEN---PSYKENAKRLSSLFRDR 426 (500)
T ss_dssp E-GCSTTHHHHHHHHHHT-TSEEEEGGGC-SHHHHHHHHHHHHHS---HHHHHHHHHHHHTTT--
T ss_pred CCCCcccCCccceEEEEE-eeEEEEEecCCcHHHHHHHHHHHHhh---hHHHHHHHHHHHHHhcC
Confidence 999999999999999995 99999998 99999999999999999 99999999999999974
No 24
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=2.4e-44 Score=353.31 Aligned_cols=375 Identities=20% Similarity=0.216 Sum_probs=256.4
Q ss_pred EcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCC-----CCh-hHHHHHHHHHhc
Q 013342 4 VPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVS-----TGI-NILITNLLNVNC 77 (445)
Q Consensus 4 ~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~-~~~~~~~~~~~~ 77 (445)
+.+|++||++|+++||++|+++||+|+|++++.....+ +..|+.|+.++......... .+. .++. .+...+
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 77 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERV-EAAGAEFVLYGSALPPPDNPPENTEEEPIDIIE--KLLDEA 77 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHH-HHcCCEEEecCCcCccccccccccCcchHHHHH--HHHHHH
Confidence 46899999999999999999999999999997655444 44689999998644321110 122 3333 333333
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCC
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPN 157 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (445)
...+.++...+ +. .+||+||+|.+++++..+|+.+|||+|.+++.+.... .+ +.. . .|...
T Consensus 78 ~~~~~~l~~~~-~~--------~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~-~~---~~~---~-~~~~~-- 138 (392)
T TIGR01426 78 EDVLPQLEEAY-KG--------DRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANE-EF---EEM---V-SPAGE-- 138 (392)
T ss_pred HHHHHHHHHHh-cC--------CCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccc-cc---ccc---c-cccch--
Confidence 33333333222 21 2899999999888899999999999998865432110 00 000 0 01100
Q ss_pred CCCcCCCCCCCCCCCCCCCcccccchHHHHHHH----Hhhh--ccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccC
Q 013342 158 KLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLIT----SMYK--IRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPF 231 (445)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~ 231 (445)
.+.... ......+.... +..+..++.++ .... ....+..+..+.+.|+++ ++.++++++++||+
T Consensus 139 ~~~~~~----~~~~~~~~~~~-~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~~~~~Gp~ 208 (392)
T TIGR01426 139 GSAEEG----AIAERGLAEYV-ARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA-----GETFDDSFTFVGPC 208 (392)
T ss_pred hhhhhh----ccccchhHHHH-HHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC-----ccccCCCeEEECCC
Confidence 000000 00000000000 11111111111 0011 122334567777777764 44577889999998
Q ss_pred CCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCch
Q 013342 232 HKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLP 311 (445)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~ 311 (445)
...+.. ...|.....++++||+|+||+.....+.++.+++++.+.+.+++|.++.+. ..
T Consensus 209 ~~~~~~------------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~---------~~ 267 (392)
T TIGR01426 209 IGDRKE------------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGV---------DP 267 (392)
T ss_pred CCCccc------------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCC---------Ch
Confidence 754321 123666567889999999998766666888899999999999998875431 01
Q ss_pred HHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc-c
Q 013342 312 EVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN-E 390 (445)
Q Consensus 312 ~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~ 390 (445)
..+ ...++|+.+.+|+||.++|+++++ +|||||+||++|++++|+|+|++|...||+.||+++++ +|+|+.+.. +
T Consensus 268 ~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~-~g~g~~l~~~~ 343 (392)
T TIGR01426 268 ADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAE-LGLGRHLPPEE 343 (392)
T ss_pred hHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHH-CCCEEEecccc
Confidence 111 124678899999999999999998 99999999999999999999999999999999999999 699999987 8
Q ss_pred cCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 391 LEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 391 ~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
+++++|.++|+++|+| ++|+++++++++.+++. ++.+++++.+.+
T Consensus 344 ~~~~~l~~ai~~~l~~---~~~~~~~~~l~~~~~~~----~~~~~aa~~i~~ 388 (392)
T TIGR01426 344 VTAEKLREAVLAVLSD---PRYAERLRKMRAEIREA----GGARRAADEIEG 388 (392)
T ss_pred CCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHc----CCHHHHHHHHHH
Confidence 9999999999999999 89999999999999987 666555544443
No 25
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=2.7e-42 Score=340.22 Aligned_cols=373 Identities=18% Similarity=0.170 Sum_probs=244.0
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCC----------C--Ch-hH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVS----------T--GI-NI 67 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~--~~-~~ 67 (445)
|+|+++|+.||++|+++||++|++|||+|+|++++.....+ ...|++|+.+++........ . .. ..
T Consensus 3 Il~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (401)
T cd03784 3 VLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLV-EAAGLEFVPVGGDPDELLASPERNAGLLLLGPGLLLGA 81 (401)
T ss_pred EEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHH-HHcCCceeeCCCCHHHHHhhhhhcccccccchHHHHHH
Confidence 68999999999999999999999999999999996444333 45689999998543211000 0 11 22
Q ss_pred HHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhh
Q 013342 68 LITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEE 147 (445)
Q Consensus 68 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 147 (445)
.. .+...+...+.++++.+. .++||+||+|.+.+++..+|+++|||++.+++++.......
T Consensus 82 ~~--~~~~~~~~~~~~~~~~~~---------~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~-------- 142 (401)
T cd03784 82 LR--LLRREAEAMLDDLVAAAR---------DWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAF-------- 142 (401)
T ss_pred HH--HHHHHHHHHHHHHHHHhc---------ccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccC--------
Confidence 22 333344444444443332 12999999999888899999999999999887664321100
Q ss_pred cCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH-hhhc--c-------CCcEEEEcchhhhcHHHHHHH
Q 013342 148 EGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS-MYKI--R-------TSSAVIWNTMHYLEESSLAQL 217 (445)
Q Consensus 148 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~-------~~~~~l~n~~~~le~~~~~~~ 217 (445)
.|... .. ........ ............+.. ...+ . ..+..+....+.+.++
T Consensus 143 ---~~~~~---------~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~----- 203 (401)
T cd03784 143 ---PPPLG---------RA-NLRLYALL-EAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPP----- 203 (401)
T ss_pred ---CCccc---------hH-HHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCC-----
Confidence 00000 00 00000000 000000000000110 0000 0 1122233222222221
Q ss_pred HhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCCh-hhHHHHHHHHHhCCCCEEEEE
Q 013342 218 QQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDK-KEPEEMAWGLVNSKQPFLWVI 296 (445)
Q Consensus 218 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~v~~~ 296 (445)
.+.++.+..++|......+. ....+.++..|++ .++++||||+||+..... .....+++++++.+.++||++
T Consensus 204 ~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~--~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~ 276 (401)
T cd03784 204 PPDWPRFDLVTGYGFRDVPY-----NGPPPPELWLFLA--AGRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSL 276 (401)
T ss_pred CCCccccCcEeCCCCCCCCC-----CCCCCHHHHHHHh--CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEc
Confidence 23355667777633322221 1233455778887 467899999999987444 567779999999999999988
Q ss_pred CCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHH
Q 013342 297 RPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARY 376 (445)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~ 376 (445)
+.... .. ...++|+++++|+||.++|+++++ ||||||+||++|++++|||+|++|+..||+.||++
T Consensus 277 g~~~~---------~~---~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~ 342 (401)
T cd03784 277 GWGGL---------GA---EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAAR 342 (401)
T ss_pred cCccc---------cc---cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHH
Confidence 54311 00 124678899999999999999999 99999999999999999999999999999999999
Q ss_pred HHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 377 VSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 377 v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
+++ +|+|+.++. ++++++|.++|++++++ + ++++++++++++++. ++ ...+.++|++
T Consensus 343 ~~~-~G~g~~l~~~~~~~~~l~~al~~~l~~---~-~~~~~~~~~~~~~~~----~g-~~~~~~~ie~ 400 (401)
T cd03784 343 VAE-LGAGPALDPRELTAERLAAALRRLLDP---P-SRRRAAALLRRIREE----DG-VPSAADVIER 400 (401)
T ss_pred HHH-CCCCCCCCcccCCHHHHHHHHHHHhCH---H-HHHHHHHHHHHHHhc----cC-HHHHHHHHhh
Confidence 999 699999987 78999999999999997 4 556677777777665 44 4555555554
No 26
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=3.5e-41 Score=341.38 Aligned_cols=388 Identities=31% Similarity=0.461 Sum_probs=254.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC-CCCc----------eEEEcCCCCCCCCCCC--Ch-h
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSN-HPEF----------NFQSIPDGLTADDVST--GI-N 66 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~-~~~~----------~~~~l~~~~~~~~~~~--~~-~ 66 (445)
++++++|++||++|++.||+.|+++||+||++++......... .... .+...++.++...... .. .
T Consensus 8 ~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (496)
T KOG1192|consen 8 NILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSKSKSIKKINPPPFEFLTIPDGLPEGWEDDDLDISE 87 (496)
T ss_pred eEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCcccceeeeeeecChHHhhhhhhhhccchHHHHHHHHH
Confidence 3678889999999999999999999999999998655443211 1111 1111111222211110 11 2
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhC-CceEEEccchHHHHHHHHhhhhh
Q 013342 67 ILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLN-LQSIILRTTSAATQISRLALLHL 145 (445)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~g-iP~v~~~~~~~~~~~~~~~~~~~ 145 (445)
... .+...|...+.+....+..... . ++|++|+|.+..+...++.... ++...+.+..+........
T Consensus 88 ~~~--~~~~~~~~~~~~~~~~~~~~~~-----~-~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~---- 155 (496)
T KOG1192|consen 88 SLL--ELNKTCEDLLRDPLEKLLLLKS-----E-KFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLP---- 155 (496)
T ss_pred HHH--HHHHHHHHHHhchHHHHHHhhc-----C-CccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCc----
Confidence 233 4556677777775555554432 1 4999999987666666666664 8888777766665543322
Q ss_pred hhcCCCCCCCC------CCCCcCCCCCCCCCCCCCCCcccc-----cchHHHHHHH-H--------hhhccCCcEEEEcc
Q 013342 146 EEEGSSPLQDP------NKLQDPVPGLHPLRFKDLPTYRHE-----IMEHYLQLIT-S--------MYKIRTSSAVIWNT 205 (445)
Q Consensus 146 ~~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~--------~~~~~~~~~~l~n~ 205 (445)
.+..+.|.... ..+..+..++ ....++..... .......... . .+...+.+..++|+
T Consensus 156 ~~~~~~p~~~~~~~~~~~~~~~~~~n~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~ 232 (496)
T KOG1192|consen 156 SPLSYVPSPFSLSSGDDMSFPERVPNL---IKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNS 232 (496)
T ss_pred CcccccCcccCccccccCcHHHHHHHH---HHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEcc
Confidence 12224433220 0111111110 00000000000 0000011110 0 13345566778888
Q ss_pred hhhhcHHHHHHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCC--ceEEEEecccc---cCChhhHHH
Q 013342 206 MHYLEESSLAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPE--SVIYVSLGSVA---SMDKKEPEE 280 (445)
Q Consensus 206 ~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~--~~v~vs~Gs~~---~~~~~~~~~ 280 (445)
.+.++++. ++ ..+++++|||++..... .... .+..|++..+.. ++|||||||+. .++.+....
T Consensus 233 ~~~~~~~~----~~-~~~~v~~IG~l~~~~~~-----~~~~--~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~ 300 (496)
T KOG1192|consen 233 NPLLDFEP----RP-LLPKVIPIGPLHVKDSK-----QKSP--LPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKE 300 (496)
T ss_pred CcccCCCC----CC-CCCCceEECcEEecCcc-----cccc--ccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHH
Confidence 77766520 11 35889999999987433 1111 256787765554 89999999998 689999999
Q ss_pred HHHHHHhC-CCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHH-hhccccCceeeccCchhHHHHHhhC
Q 013342 281 MAWGLVNS-KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEV-LSHVAVGGFWSHCGWNSTLECLCEG 358 (445)
Q Consensus 281 ~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~l-L~~~~~~~~I~HgG~gsv~eal~~G 358 (445)
++.|++++ +++|+|+++.... ..+++++.++.++|+...+|+||.++ |.|+++++||||||+||++|++++|
T Consensus 301 l~~~l~~~~~~~FiW~~~~~~~------~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~G 374 (496)
T KOG1192|consen 301 LAKALESLQGVTFLWKYRPDDS------IYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSG 374 (496)
T ss_pred HHHHHHhCCCceEEEEecCCcc------hhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcC
Confidence 99999999 7788999965410 11233322112457888899999998 5999999999999999999999999
Q ss_pred CCcccCCcccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 013342 359 VPMICRPCFGDQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 359 vP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~ 425 (445)
||||++|+++||+.||++++++ |.|..+.+ +++.+.+..++.+++++ ++|+++|+++++.+++
T Consensus 375 vP~v~~Plf~DQ~~Na~~i~~~-g~~~v~~~~~~~~~~~~~~~~~il~~---~~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 375 VPMVCVPLFGDQPLNARLLVRH-GGGGVLDKRDLVSEELLEAIKEILEN---EEYKEAAKRLSEILRD 438 (496)
T ss_pred CceecCCccccchhHHHHHHhC-CCEEEEehhhcCcHHHHHHHHHHHcC---hHHHHHHHHHHHHHHc
Confidence 9999999999999999999996 77777766 67777799999999999 8999999999999874
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=329.80 Aligned_cols=383 Identities=20% Similarity=0.174 Sum_probs=243.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCC-CCC--Ch-hHHHHHHHHHh
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADD-VST--GI-NILITNLLNVN 76 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~--~~-~~~~~~~~~~~ 76 (445)
|+++..|++||++|+++||++|.++||+|+|+|++...+.+ +..|+.|..++....+.. ... +. +.+. .....
T Consensus 4 il~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~v-e~ag~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 80 (406)
T COG1819 4 ILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFV-EAAGLAFVAYPIRDSELATEDGKFAGVKSFR--RLLQQ 80 (406)
T ss_pred EEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHH-HHhCcceeeccccCChhhhhhhhhhccchhH--HHhhh
Confidence 57888899999999999999999999999999997655555 344677887775321111 100 11 1111 11112
Q ss_pred cchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCC
Q 013342 77 CQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDP 156 (445)
Q Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 156 (445)
......+.++-+.+. .+|+|+.|...+.+ .+++..++|++.......+....... ...+....
T Consensus 81 ~~~~~~~~~~~~~e~---------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 143 (406)
T COG1819 81 FKKLIRELLELLREL---------EPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTPLPAAGL-------PLPPVGIA 143 (406)
T ss_pred hhhhhHHHHHHHHhc---------chhhhhcchhhhhh-hhhhhcccchhhhhhhhccCCccccc-------Cccccccc
Confidence 222222333333332 78999999766655 88999999999866654443322211 00000000
Q ss_pred CCCCcCCCCCCCCCCCCCCCcccccch-HHHH-HHHH-hhhccCCcEEEEcchhhhcHHHHHHH-H--hccCCCceeecc
Q 013342 157 NKLQDPVPGLHPLRFKDLPTYRHEIME-HYLQ-LITS-MYKIRTSSAVIWNTMHYLEESSLAQL-Q--QQCQVPIFPIGP 230 (445)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~-~--~~~~~~~~~vGp 230 (445)
+......-.+ ...........+.. .... .... ++.....-..+...-+.++....+.. . ..+|....++||
T Consensus 144 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 220 (406)
T COG1819 144 GKLPIPLYPL---PPRLVRPLIFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIGP 220 (406)
T ss_pred cccccccccc---ChhhccccccchhhhhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCCCCCCcCcccc
Confidence 0000000000 00000000000000 0000 0000 01000000111111122221111100 0 113345677777
Q ss_pred CCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCc
Q 013342 231 FHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLL 310 (445)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~ 310 (445)
+...+.. +...|.. .++++||+|+||.... .++++.+++++.+++.++|...... .
T Consensus 221 ~~~~~~~-----------~~~~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~--------- 276 (406)
T COG1819 221 LLGEAAN-----------ELPYWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-R--------- 276 (406)
T ss_pred ccccccc-----------cCcchhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-c---------
Confidence 7755443 1334543 6788999999999876 8889999999999999999887431 0
Q ss_pred hHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc-
Q 013342 311 PEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN- 389 (445)
Q Consensus 311 ~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~- 389 (445)
. -....++|+++++|+||.++|+++++ ||||||+||++|||++|||+|++|...||+.||.|+++ +|+|..++.
T Consensus 277 -~-~~~~~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~G~G~~l~~~ 351 (406)
T COG1819 277 -D-TLVNVPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-LGAGIALPFE 351 (406)
T ss_pred -c-ccccCCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-cCCceecCcc
Confidence 0 11225678899999999999999999 99999999999999999999999999999999999999 699999998
Q ss_pred ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 390 ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 390 ~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
.++++.|+++|+++|+| ++|+++++++++.++.. ++ .+.+.++|++
T Consensus 352 ~l~~~~l~~av~~vL~~---~~~~~~~~~~~~~~~~~----~g-~~~~a~~le~ 397 (406)
T COG1819 352 ELTEERLRAAVNEVLAD---DSYRRAAERLAEEFKEE----DG-PAKAADLLEE 397 (406)
T ss_pred cCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHhhhc----cc-HHHHHHHHHH
Confidence 89999999999999999 99999999999999998 55 5666666665
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.95 E-value=3.1e-25 Score=212.94 Aligned_cols=316 Identities=16% Similarity=0.166 Sum_probs=199.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCC-CCCCCCCCCChhHHHHHHHHHhcc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN-PSNHPEFNFQSIPD-GLTADDVSTGINILITNLLNVNCQ 78 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 78 (445)
|+|.+.++-||++|.++||++|.++||+|+|++.....+. .....|+.++.++. .+.... .+..+. .......
T Consensus 4 i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~---~~~~~~--~~~~~~~ 78 (352)
T PRK12446 4 IVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYF---DLKNIK--DPFLVMK 78 (352)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEeccCcCCCc---hHHHHH--HHHHHHH
Confidence 5778888999999999999999999999999998654443 22344788888873 221110 111111 1111111
Q ss_pred hHH--HHHHHHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCC
Q 013342 79 APF--FECMVRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQ 154 (445)
Q Consensus 79 ~~~--~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (445)
..+ ..++++. +||+|+..... .++..+|..+++|++......
T Consensus 79 ~~~~~~~i~~~~------------kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~---------------------- 124 (352)
T PRK12446 79 GVMDAYVRIRKL------------KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDM---------------------- 124 (352)
T ss_pred HHHHHHHHHHhc------------CCCEEEecCchhhHHHHHHHHHcCCCEEEECCCC----------------------
Confidence 111 1134443 99999997644 346789999999999843321
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccC-CCceeeccCCC
Q 013342 155 DPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ-VPIFPIGPFHK 233 (445)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~-~~~~~vGp~~~ 233 (445)
.+++ .+ +. ..+.++.++ .+|++- ...++ .+++++|+...
T Consensus 125 --------~~g~--------------~n----r~-----~~~~a~~v~-~~f~~~--------~~~~~~~k~~~tG~Pvr 164 (352)
T PRK12446 125 --------TPGL--------------AN----KI-----ALRFASKIF-VTFEEA--------AKHLPKEKVIYTGSPVR 164 (352)
T ss_pred --------CccH--------------HH----HH-----HHHhhCEEE-EEccch--------hhhCCCCCeEEECCcCC
Confidence 1110 00 00 011223333 333221 12233 46889998875
Q ss_pred CCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCCh-hhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchH
Q 013342 234 FAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDK-KEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPE 312 (445)
Q Consensus 234 ~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~ 312 (445)
..-. . . ..+...+-+.-.+++++|+|+.||...... +.+...+..+.. +.+++|+++... +.+
T Consensus 165 ~~~~---~--~-~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~---------~~~ 228 (352)
T PRK12446 165 EEVL---K--G-NREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN---------LDD 228 (352)
T ss_pred cccc---c--c-cchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch---------HHH
Confidence 5332 0 0 011111222223567899999999986333 223334444432 478888875430 111
Q ss_pred HHHHHhcCCcEEEEec-c-HHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcc-----cchhhhHHHHHhhheeee
Q 013342 313 VLAEAVQENGCIVKWA-P-QKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCF-----GDQRVNARYVSHVWRTGL 385 (445)
Q Consensus 313 ~~~~~~~~n~~~~~~~-p-q~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~-----~DQ~~na~~v~~~~G~g~ 385 (445)
... . ..+..+.+|+ + ..++|.++|+ +|||||.+|++|++++|+|+|++|+. .||..||+.+++ .|+|.
T Consensus 229 ~~~-~-~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~-~g~~~ 303 (352)
T PRK12446 229 SLQ-N-KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER-QGYAS 303 (352)
T ss_pred HHh-h-cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH-CCCEE
Confidence 111 1 1345666887 4 4679999999 99999999999999999999999984 589999999999 59999
Q ss_pred EeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHH
Q 013342 386 ELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKN 418 (445)
Q Consensus 386 ~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~ 418 (445)
.+.. +++++.|.+++.++++|. +.|++++++
T Consensus 304 ~l~~~~~~~~~l~~~l~~ll~~~--~~~~~~~~~ 335 (352)
T PRK12446 304 VLYEEDVTVNSLIKHVEELSHNN--EKYKTALKK 335 (352)
T ss_pred EcchhcCCHHHHHHHHHHHHcCH--HHHHHHHHH
Confidence 9977 899999999999999883 356655544
No 29
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.92 E-value=1.3e-23 Score=200.69 Aligned_cols=299 Identities=16% Similarity=0.162 Sum_probs=188.1
Q ss_pred EEEcCC-CccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCC-Ch-hHHHHHHHH---H
Q 013342 2 VLVPSP-FQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVST-GI-NILITNLLN---V 75 (445)
Q Consensus 2 l~~~~p-~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~~~~---~ 75 (445)
+|...+ +.||+.+.++||++| |||+|+|++........ .. .+.+..+++......... +. .... ... .
T Consensus 4 l~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 77 (318)
T PF13528_consen 4 LFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFL-KP-RFPVREIPGLGPIQENGRLDRWKTVR--NNIRWLA 77 (318)
T ss_pred EEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHh-cc-ccCEEEccCceEeccCCccchHHHHH--HHHHhhH
Confidence 444444 999999999999999 69999999986443333 22 256777764322222222 32 2222 111 1
Q ss_pred hcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCC
Q 013342 76 NCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQD 155 (445)
Q Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (445)
.....+.++++.+.+ ++||+||+| +.+.+..+|+..|+|++.+........... ..+
T Consensus 78 ~~~~~~~~~~~~l~~---------~~pDlVIsD-~~~~~~~aa~~~giP~i~i~~~~~~~~~~~----------~~~--- 134 (318)
T PF13528_consen 78 RLARRIRREIRWLRE---------FRPDLVISD-FYPLAALAARRAGIPVIVISNQYWFLHPNF----------WLP--- 134 (318)
T ss_pred HHHHHHHHHHHHHHh---------cCCCEEEEc-ChHHHHHHHHhcCCCEEEEEehHHcccccC----------Ccc---
Confidence 222333333333322 299999999 455567899999999999776553321000 000
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH-h-hh-ccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCC
Q 013342 156 PNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS-M-YK-IRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFH 232 (445)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~ 232 (445)
......+.... . .. +..++..+.-++. ... . ...+..++||+.
T Consensus 135 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~-------~-~~~~~~~~~p~~ 180 (318)
T PF13528_consen 135 -------------------------WDQDFGRLIERYIDRYHFPPADRRLALSFY-PPL-------P-PFFRVPFVGPII 180 (318)
T ss_pred -------------------------hhhhHHHHHHHhhhhccCCcccceecCCcc-ccc-------c-ccccccccCchh
Confidence 00001111111 1 11 2344444544443 110 0 113466788887
Q ss_pred CCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCC-CEEEEECCCCCCCCCccCCch
Q 013342 233 KFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQ-PFLWVIRPSSNNAPEGIDLLP 311 (445)
Q Consensus 233 ~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~-~~v~~~~~~~~~~~~~~~~~~ 311 (445)
..+.. +.. ..+++.|+|++|..... .+++++++.+. .+++. +...
T Consensus 181 ~~~~~--------------~~~--~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~----------- 226 (318)
T PF13528_consen 181 RPEIR--------------ELP--PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA----------- 226 (318)
T ss_pred ccccc--------------ccC--CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc-----------
Confidence 54332 011 13456899999977532 77788888774 54444 3220
Q ss_pred HHHHHHhcCCcEEEEec--cHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCc--ccchhhhHHHHHhhheeeeEe
Q 013342 312 EVLAEAVQENGCIVKWA--PQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC--FGDQRVNARYVSHVWRTGLEL 387 (445)
Q Consensus 312 ~~~~~~~~~n~~~~~~~--pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~--~~DQ~~na~~v~~~~G~g~~~ 387 (445)
.+..++|+.+.+|. ...++|..+++ +|||||+||++|++++|+|+|++|. ..||..||+++++ +|+|+.+
T Consensus 227 ---~~~~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~~~~ 300 (318)
T PF13528_consen 227 ---ADPRPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLGIVL 300 (318)
T ss_pred ---ccccCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEc
Confidence 01125788888876 45679999999 9999999999999999999999999 7899999999999 6999999
Q ss_pred Cc-ccCHHHHHHHHHHH
Q 013342 388 EN-ELEREVVEKAVRRL 403 (445)
Q Consensus 388 ~~-~~t~~~l~~ai~~l 403 (445)
+. +++++.|+++|+++
T Consensus 301 ~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 301 SQEDLTPERLAEFLERL 317 (318)
T ss_pred ccccCCHHHHHHHHhcC
Confidence 87 89999999999764
No 30
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=3.4e-22 Score=189.67 Aligned_cols=319 Identities=19% Similarity=0.188 Sum_probs=197.0
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEeCCCCCCC-CCCCCCceEEEcCCCCCCCCCCC-Ch-hHHHHHHHHHh
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGF-SITVVHTHFNPPN-PSNHPEFNFQSIPDGLTADDVST-GI-NILITNLLNVN 76 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh-~Vt~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~~~~~~ 76 (445)
|++...++-||+.|.++|+++|.++|+ +|.++.+....+. .....++.++.++.......... .+ ..+. .+ .
T Consensus 3 ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~--~~--~ 78 (357)
T COG0707 3 IVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQYGIEFELIPSGGLRRKGSLKLLKAPFK--LL--K 78 (357)
T ss_pred EEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeeccccCceEEEEecccccccCcHHHHHHHHH--HH--H
Confidence 467777899999999999999999999 5888766543333 44445899999985433322111 11 1111 11 1
Q ss_pred cchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCC
Q 013342 77 CQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQ 154 (445)
Q Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (445)
.......++++. +||+|+....+ .++..+|..+|||++..-+
T Consensus 79 ~~~~a~~il~~~------------kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEq------------------------ 122 (357)
T COG0707 79 GVLQARKILKKL------------KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQ------------------------ 122 (357)
T ss_pred HHHHHHHHHHHc------------CCCEEEecCCccccHHHHHHHhCCCCEEEEec------------------------
Confidence 112223355555 99999997655 5666888899999998322
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhcc-CCCceeeccCCC
Q 013342 155 DPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQC-QVPIFPIGPFHK 233 (445)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~-~~~~~~vGp~~~ 233 (445)
+..++... ....+....+..+|+..+. .. +.+++.+|-...
T Consensus 123 ------n~~~G~an------------------------k~~~~~a~~V~~~f~~~~~--------~~~~~~~~~tG~Pvr 164 (357)
T COG0707 123 ------NAVPGLAN------------------------KILSKFAKKVASAFPKLEA--------GVKPENVVVTGIPVR 164 (357)
T ss_pred ------CCCcchhH------------------------HHhHHhhceeeeccccccc--------cCCCCceEEecCccc
Confidence 11222100 0001111223334432110 01 134777875443
Q ss_pred CCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC--CCCEEEEECCCCCCCCCccCCch
Q 013342 234 FAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS--KQPFLWVIRPSSNNAPEGIDLLP 311 (445)
Q Consensus 234 ~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~ 311 (445)
.+-. + . +.. -..... ..++++|+|.-||+.... +-+.+.+++..+ +..+++.++.+ . .
T Consensus 165 ~~~~----~-~-~~~-~~~~~~-~~~~~~ilV~GGS~Ga~~--ln~~v~~~~~~l~~~~~v~~~~G~~---------~-~ 224 (357)
T COG0707 165 PEFE----E-L-PAA-EVRKDG-RLDKKTILVTGGSQGAKA--LNDLVPEALAKLANRIQVIHQTGKN---------D-L 224 (357)
T ss_pred HHhh----c-c-chh-hhhhhc-cCCCcEEEEECCcchhHH--HHHHHHHHHHHhhhCeEEEEEcCcc---------h-H
Confidence 3211 0 0 110 111111 236889999999997522 222233333333 35666666433 1 1
Q ss_pred HHHHHHhc-CC-cEEEEeccH-HHHhhccccCceeeccCchhHHHHHhhCCCcccCCc-c---cchhhhHHHHHhhheee
Q 013342 312 EVLAEAVQ-EN-GCIVKWAPQ-KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC-F---GDQRVNARYVSHVWRTG 384 (445)
Q Consensus 312 ~~~~~~~~-~n-~~~~~~~pq-~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~-~---~DQ~~na~~v~~~~G~g 384 (445)
+.+..... .+ +.+.+|+.+ .++|..+|+ +||++|.+|+.|++++|+|+|.+|. . .||..||+.++++ |.|
T Consensus 225 ~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-gaa 301 (357)
T COG0707 225 EELKSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-GAA 301 (357)
T ss_pred HHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-CCE
Confidence 22222222 23 667788876 559999999 9999999999999999999999997 2 4999999999995 999
Q ss_pred eEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 385 LELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 385 ~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
..++. ++|++.+.+.|.+++++ .++.++|++..++.
T Consensus 302 ~~i~~~~lt~~~l~~~i~~l~~~------~~~l~~m~~~a~~~ 338 (357)
T COG0707 302 LVIRQSELTPEKLAELILRLLSN------PEKLKAMAENAKKL 338 (357)
T ss_pred EEeccccCCHHHHHHHHHHHhcC------HHHHHHHHHHHHhc
Confidence 99998 99999999999999998 34444455555543
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.89 E-value=1.2e-21 Score=186.84 Aligned_cols=127 Identities=23% Similarity=0.251 Sum_probs=94.6
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEecc--HHHHhhc
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAP--QKEVLSH 336 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p--q~~lL~~ 336 (445)
+++.|++.+|+.. .+.+++++++.+. +.+++... +.... ..++|+.+.+|.| ..+.|+.
T Consensus 187 ~~~~iLv~~g~~~------~~~l~~~l~~~~~-~~~i~~~~--------~~~~~----~~~~~v~~~~~~~~~~~~~l~~ 247 (321)
T TIGR00661 187 GEDYILVYIGFEY------RYKILELLGKIAN-VKFVCYSY--------EVAKN----SYNENVEIRRITTDNFKELIKN 247 (321)
T ss_pred CCCcEEEECCcCC------HHHHHHHHHhCCC-eEEEEeCC--------CCCcc----ccCCCEEEEECChHHHHHHHHh
Confidence 4567778777753 3556788877764 22332211 00111 1357888999997 4668899
Q ss_pred cccCceeeccCchhHHHHHhhCCCcccCCccc--chhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHH
Q 013342 337 VAVGGFWSHCGWNSTLECLCEGVPMICRPCFG--DQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMR 413 (445)
Q Consensus 337 ~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~ 413 (445)
|++ +|||||++|++|++++|+|+|++|... ||..||+.+++ .|+|+.++. ++ ++.+++.++++| +.|+
T Consensus 248 ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~~~~~---~~~~~~~~~~~~---~~~~ 318 (321)
T TIGR00661 248 AEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALEYKEL---RLLEAILDIRNM---KRYK 318 (321)
T ss_pred CCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcChhhH---HHHHHHHhcccc---cccc
Confidence 999 999999999999999999999999854 99999999999 599999987 54 667777788888 5554
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.82 E-value=4.4e-18 Score=165.22 Aligned_cols=337 Identities=15% Similarity=0.114 Sum_probs=194.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcch
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN-PSNHPEFNFQSIPDGLTADDVSTGINILITNLLNVNCQA 79 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (445)
|+|+..+..||....+.|++.|.++||+|++++....... .....+++++.++..-.... . ....+. ..... ..
T Consensus 4 i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~-~~~~l~--~~~~~-~~ 78 (357)
T PRK00726 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPKAGIEFHFIPSGGLRRK-G-SLANLK--APFKL-LK 78 (357)
T ss_pred EEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccccCCCcEEEEeccCcCCC-C-hHHHHH--HHHHH-HH
Confidence 4666677889999999999999999999999988542211 11224777877763211111 0 111111 11000 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCC
Q 013342 80 PFFECMVRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPN 157 (445)
Q Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (445)
.+..+. ++.++. +||+|++.... ..+..+++..++|++.......
T Consensus 79 ~~~~~~-~~ik~~--------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------------ 125 (357)
T PRK00726 79 GVLQAR-KILKRF--------KPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAV------------------------ 125 (357)
T ss_pred HHHHHH-HHHHhc--------CCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCC------------------------
Confidence 111122 222221 89999999633 4455667778999986311000
Q ss_pred CCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCCCC
Q 013342 158 KLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAPF 237 (445)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~ 237 (445)
++ . ..++ ....++.++..+...+ ...-+.++.++|........
T Consensus 126 ------~~---------------~---~~r~-----~~~~~d~ii~~~~~~~--------~~~~~~~i~vi~n~v~~~~~ 168 (357)
T PRK00726 126 ------PG---------------L---ANKL-----LARFAKKVATAFPGAF--------PEFFKPKAVVTGNPVREEIL 168 (357)
T ss_pred ------cc---------------H---HHHH-----HHHHhchheECchhhh--------hccCCCCEEEECCCCChHhh
Confidence 00 0 0000 0112333333322111 00112568888876644221
Q ss_pred CCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHH-HHHHHHHhCCC--CEEEEECCCCCCCCCccCCchHHH
Q 013342 238 STSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPE-EMAWGLVNSKQ--PFLWVIRPSSNNAPEGIDLLPEVL 314 (445)
Q Consensus 238 ~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~-~~~~al~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~ 314 (445)
.....-.++ ...+++++|++..|+. ..+.+. .+.+++++... .+++.++.+ .. +.+
T Consensus 169 -------~~~~~~~~~-~~~~~~~~i~~~gg~~---~~~~~~~~l~~a~~~~~~~~~~~~~~G~g---------~~-~~~ 227 (357)
T PRK00726 169 -------ALAAPPARL-AGREGKPTLLVVGGSQ---GARVLNEAVPEALALLPEALQVIHQTGKG---------DL-EEV 227 (357)
T ss_pred -------cccchhhhc-cCCCCCeEEEEECCcH---hHHHHHHHHHHHHHHhhhCcEEEEEcCCC---------cH-HHH
Confidence 000000111 1113445666655543 222233 34477666543 344444332 11 222
Q ss_pred HHH--hcCCcEEEEecc-HHHHhhccccCceeeccCchhHHHHHhhCCCcccCCc----ccchhhhHHHHHhhheeeeEe
Q 013342 315 AEA--VQENGCIVKWAP-QKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC----FGDQRVNARYVSHVWRTGLEL 387 (445)
Q Consensus 315 ~~~--~~~n~~~~~~~p-q~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~----~~DQ~~na~~v~~~~G~g~~~ 387 (445)
.+. ..-++.+.+|+. ..++|+.+|+ +|+|+|.++++|++++|+|+|++|. .+||..|+..+.+ .|.|..+
T Consensus 228 ~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~ 304 (357)
T PRK00726 228 RAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAALLI 304 (357)
T ss_pred HHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEEEE
Confidence 211 222367789984 5789999999 9999999999999999999999997 4789999999999 4999999
Q ss_pred Cc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 388 EN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 388 ~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
.. +++++.|+++|.++++| +.+++++.+-+.++.+. .+..+.++.+++.
T Consensus 305 ~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 354 (357)
T PRK00726 305 PQSDLTPEKLAEKLLELLSD---PERLEAMAEAARALGKP----DAAERLADLIEEL 354 (357)
T ss_pred EcccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHhcCCc----CHHHHHHHHHHHH
Confidence 77 77899999999999999 67766655555444333 5565666655543
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.81 E-value=1.3e-17 Score=161.36 Aligned_cols=323 Identities=15% Similarity=0.112 Sum_probs=187.3
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHHh--c
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN-PSNHPEFNFQSIPDGLTADDVSTGINILITNLLNVN--C 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~ 77 (445)
|++.+.+..||......|++.|.++||+|++++....... .....+++++.++-.-..... .+..+. ..... .
T Consensus 2 ~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~ 77 (350)
T cd03785 2 ILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRRKG--SLKKLK--APFKLLKG 77 (350)
T ss_pred EEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhcccccCCceEEEEecCcCCCC--hHHHHH--HHHHHHHH
Confidence 5777888889999999999999999999999987533222 112235777777632111110 111111 11111 1
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCC
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQD 155 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (445)
...+..++++. +||+|++.... ..+..++...++|++......
T Consensus 78 ~~~~~~~i~~~------------~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~----------------------- 122 (350)
T cd03785 78 VLQARKILKKF------------KPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNA----------------------- 122 (350)
T ss_pred HHHHHHHHHhc------------CCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCC-----------------------
Confidence 11122233322 89999987533 345667888999998621100
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCC
Q 013342 156 PNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFA 235 (445)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~ 235 (445)
.++. ..+ .....++.++..+....++ .-+.++.++|......
T Consensus 123 -------~~~~------------------~~~-----~~~~~~~~vi~~s~~~~~~--------~~~~~~~~i~n~v~~~ 164 (350)
T cd03785 123 -------VPGL------------------ANR-----LLARFADRVALSFPETAKY--------FPKDKAVVTGNPVREE 164 (350)
T ss_pred -------CccH------------------HHH-----HHHHhhCEEEEcchhhhhc--------CCCCcEEEECCCCchH
Confidence 0000 000 0112356666655433221 0124677788655332
Q ss_pred CCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCccCCchH
Q 013342 236 PFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEGIDLLPE 312 (445)
Q Consensus 236 ~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~ 312 (445)
.. ..... .+.+....++.+|++..|+... ......+.++++.+ +..+++.++.+ + .+.+.+
T Consensus 165 ~~-------~~~~~-~~~~~~~~~~~~i~~~~g~~~~--~~~~~~l~~a~~~l~~~~~~~~~i~G~g-----~-~~~l~~ 228 (350)
T cd03785 165 IL-------ALDRE-RARLGLRPGKPTLLVFGGSQGA--RAINEAVPEALAELLRKRLQVIHQTGKG-----D-LEEVKK 228 (350)
T ss_pred Hh-------hhhhh-HHhcCCCCCCeEEEEECCcHhH--HHHHHHHHHHHHHhhccCeEEEEEcCCc-----c-HHHHHH
Confidence 11 00000 1222212344566665565532 12222233444443 33445555332 0 111222
Q ss_pred HHHHHhcCCcEEEEec-cHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCc----ccchhhhHHHHHhhheeeeEe
Q 013342 313 VLAEAVQENGCIVKWA-PQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC----FGDQRVNARYVSHVWRTGLEL 387 (445)
Q Consensus 313 ~~~~~~~~n~~~~~~~-pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~----~~DQ~~na~~v~~~~G~g~~~ 387 (445)
.+.+ ..+|+.+.+|+ +..++|..+++ +|+++|.+|+.||+.+|+|+|++|. ..+|..++..+.+ .|.|..+
T Consensus 229 ~~~~-~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v 304 (350)
T cd03785 229 AYEE-LGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-AGAAVLI 304 (350)
T ss_pred HHhc-cCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-CCCEEEE
Confidence 2211 24689999998 55779999999 9999999999999999999999986 4689999999999 4999999
Q ss_pred Cc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 388 EN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 388 ~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
+. +.++++|.++|.++++| +..++ +|++..++.
T Consensus 305 ~~~~~~~~~l~~~i~~ll~~---~~~~~---~~~~~~~~~ 338 (350)
T cd03785 305 PQEELTPERLAAALLELLSD---PERLK---AMAEAARSL 338 (350)
T ss_pred ecCCCCHHHHHHHHHHHhcC---HHHHH---HHHHHHHhc
Confidence 76 57999999999999998 44443 444444443
No 34
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.74 E-value=1.7e-15 Score=146.50 Aligned_cols=317 Identities=19% Similarity=0.181 Sum_probs=174.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCCCCCCCCCCCCh-hHHHHHHHHHhcc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN-PSNHPEFNFQSIPDGLTADDVSTGI-NILITNLLNVNCQ 78 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 78 (445)
|+|++.+..||+.....|+++|.++||+|++++.+..... ..+..+++++.++-.-.... .. ..+. ..... .
T Consensus 3 i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~~~g~~~~~i~~~~~~~~---~~~~~l~--~~~~~-~ 76 (348)
T TIGR01133 3 VVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVPKAGIEFYFIPVGGLRRK---GSFRLIK--TPLKL-L 76 (348)
T ss_pred EEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccccCCCceEEEeccCcCCC---ChHHHHH--HHHHH-H
Confidence 5788888999999888999999999999999987432221 11234777777763211111 12 2221 11111 1
Q ss_pred hHHHHHHHHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCC
Q 013342 79 APFFECMVRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDP 156 (445)
Q Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 156 (445)
..+..+ .++.+.. +||+|++.... ..+..++..+++|++...... .
T Consensus 77 ~~~~~l-~~~i~~~--------~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~-~---------------------- 124 (348)
T TIGR01133 77 KAVFQA-RRILKKF--------KPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNA-V---------------------- 124 (348)
T ss_pred HHHHHH-HHHHHhc--------CCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCC-C----------------------
Confidence 111112 2222221 89999987544 334456778899997421100 0
Q ss_pred CCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCCC
Q 013342 157 NKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAP 236 (445)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~ 236 (445)
++. ..++ ..+.++.++..+...-++ + ...+||.......
T Consensus 125 -------~~~------------------~~~~-----~~~~~d~ii~~~~~~~~~---------~--~~~~i~n~v~~~~ 163 (348)
T TIGR01133 125 -------PGL------------------TNKL-----LSRFAKKVLISFPGAKDH---------F--EAVLVGNPVRQEI 163 (348)
T ss_pred -------ccH------------------HHHH-----HHHHhCeeEECchhHhhc---------C--CceEEcCCcCHHH
Confidence 000 0000 112345555544322111 1 2355664442211
Q ss_pred CCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHH-HHHHHHh---CCCCEEEEECCCCCCCCCccCCchH
Q 013342 237 FSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEE-MAWGLVN---SKQPFLWVIRPSSNNAPEGIDLLPE 312 (445)
Q Consensus 237 ~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~-~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~ 312 (445)
. . .+.. .+++...+++++|.+..|+.. .+.+.. +.++++. .+..+++..+.+ .. +
T Consensus 164 ~----~-~~~~---~~~~~~~~~~~~i~~~gg~~~---~~~~~~~l~~a~~~l~~~~~~~~~~~g~~---------~~-~ 222 (348)
T TIGR01133 164 R----S-LPVP---RERFGLREGKPTILVLGGSQG---AKILNELVPKALAKLAEKGIQIVHQTGKN---------DL-E 222 (348)
T ss_pred h----c-ccch---hhhcCCCCCCeEEEEECCchh---HHHHHHHHHHHHHHHhhcCcEEEEECCcc---------hH-H
Confidence 1 0 0000 112221123344433334433 223222 3355543 334555433221 11 2
Q ss_pred HHHHHhcC-C-cEEEEec--cHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcc---cchhhhHHHHHhhheeee
Q 013342 313 VLAEAVQE-N-GCIVKWA--PQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCF---GDQRVNARYVSHVWRTGL 385 (445)
Q Consensus 313 ~~~~~~~~-n-~~~~~~~--pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~g~ 385 (445)
.+.+...+ + ..++.|. +..++|+.+|+ +|+++|.+|++|++++|+|+|++|.. .+|..|+..+.+ .|.|.
T Consensus 223 ~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~G~ 299 (348)
T TIGR01133 223 KVKNVYQELGIEAIVTFIDENMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGAGL 299 (348)
T ss_pred HHHHHHhhCCceEEecCcccCHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCCEE
Confidence 22222221 1 1233444 45779999999 99999988999999999999999873 478889999999 59999
Q ss_pred EeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 386 ELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 386 ~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
.++. +.++++|.+++.++++| +..+ ++|++..++.
T Consensus 300 ~~~~~~~~~~~l~~~i~~ll~~---~~~~---~~~~~~~~~~ 335 (348)
T TIGR01133 300 VIRQKELLPEKLLEALLKLLLD---PANL---EAMAEAARKL 335 (348)
T ss_pred EEecccCCHHHHHHHHHHHHcC---HHHH---HHHHHHHHhc
Confidence 8876 67899999999999998 4444 4455555554
No 35
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.68 E-value=7.8e-15 Score=133.03 Aligned_cols=328 Identities=16% Similarity=0.149 Sum_probs=193.0
Q ss_pred EEEcC--CCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCC-CCC--Ch-hHHHHHHH
Q 013342 2 VLVPS--PFQGHMTPMLQLGTILYSN--GFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADD-VST--GI-NILITNLL 73 (445)
Q Consensus 2 l~~~~--p~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~--~~-~~~~~~~~ 73 (445)
+|++. -+.||+...+.||.+|++. |.+|+++++...........|++|+.+|.....++ ... +. --+. .+
T Consensus 13 ~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gVd~V~LPsl~k~~~G~~~~~d~~~~l~--e~ 90 (400)
T COG4671 13 LFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGVDFVKLPSLIKGDNGEYGLVDLDGDLE--ET 90 (400)
T ss_pred EEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccCceEecCceEecCCCceeeeecCCCHH--HH
Confidence 44444 4789999999999999998 99999999976666654557999999995433222 111 22 1123 33
Q ss_pred HHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCC
Q 013342 74 NVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPL 153 (445)
Q Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 153 (445)
.+.....+-...+.. +||++|+|.+-+ |+ -.++ .|.. .+.. ..+..+.
T Consensus 91 ~~~Rs~lil~t~~~f------------kPDi~IVd~~P~-Gl--r~EL-~ptL-----------~yl~-----~~~t~~v 138 (400)
T COG4671 91 KKLRSQLILSTAETF------------KPDIFIVDKFPF-GL--RFEL-LPTL-----------EYLK-----TTGTRLV 138 (400)
T ss_pred HHHHHHHHHHHHHhc------------CCCEEEEecccc-ch--hhhh-hHHH-----------HHHh-----hcCCcce
Confidence 333333222233333 999999995443 41 1111 1111 0101 0010000
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhc-cCCcEEEEcchhhhcHHHHHH-HHhccCCCceeeccC
Q 013342 154 QDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKI-RTSSAVIWNTMHYLEESSLAQ-LQQQCQVPIFPIGPF 231 (445)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~n~~~~le~~~~~~-~~~~~~~~~~~vGp~ 231 (445)
...+++.+ ++. .....+ ++.+. ...+ +..|.+++...|.|--+...+ +.++...++.|+|.+
T Consensus 139 L~lr~i~D-~p~---~~~~~w-----~~~~~-------~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~v 202 (400)
T COG4671 139 LGLRSIRD-IPQ---ELEADW-----RRAET-------VRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFV 202 (400)
T ss_pred eehHhhhh-chh---hhccch-----hhhHH-------HHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEe
Confidence 00000000 000 000000 01000 1222 225777777766654331110 111122569999999
Q ss_pred CCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHh-CCCC--EEEEECCCCCCCCCccC
Q 013342 232 HKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVN-SKQP--FLWVIRPSSNNAPEGID 308 (445)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-~~~~--~v~~~~~~~~~~~~~~~ 308 (445)
...-+. .+.+ |.. .+++.-|.||-|.-. ...+.....++|-.- .+.+ .++++++
T Consensus 203 q~~~~~------~~~p-----~~~-~pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ivtGP---------- 259 (400)
T COG4671 203 QRSLPH------LPLP-----PHE-APEGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIVTGP---------- 259 (400)
T ss_pred eccCcC------CCCC-----CcC-CCccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEEeCC----------
Confidence 432221 1111 111 144457888888654 355666666666655 3333 3444432
Q ss_pred CchHHH----HHHhc--CCcEEEEeccH-HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcc---cchhhhHHHHH
Q 013342 309 LLPEVL----AEAVQ--ENGCIVKWAPQ-KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCF---GDQRVNARYVS 378 (445)
Q Consensus 309 ~~~~~~----~~~~~--~n~~~~~~~pq-~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~---~DQ~~na~~v~ 378 (445)
.+|... ....+ +++.+..|-.+ ..+|..++. +|+-||+||+.|-|.+|+|.++||.. .||..-|.|++
T Consensus 260 ~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~ 337 (400)
T COG4671 260 FMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLE 337 (400)
T ss_pred CCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHH
Confidence 255432 23344 77888899877 558888998 99999999999999999999999984 59999999999
Q ss_pred hhheeeeEeCc-ccCHHHHHHHHHHHhc
Q 013342 379 HVWRTGLELEN-ELEREVVEKAVRRLMV 405 (445)
Q Consensus 379 ~~~G~g~~~~~-~~t~~~l~~ai~~ll~ 405 (445)
+ +|+--.+-+ ++++..+++++...++
T Consensus 338 ~-LGL~dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 338 E-LGLVDVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred h-cCcceeeCcccCChHHHHHHHHhccc
Confidence 9 899988877 9999999999999987
No 36
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.68 E-value=1.5e-15 Score=148.10 Aligned_cols=345 Identities=11% Similarity=-0.033 Sum_probs=190.6
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC-CCCCCCCCceEEEcCCCCCCCCCCCCh-hHHHHHHHHHhcc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP-PNPSNHPEFNFQSIPDGLTADDVSTGI-NILITNLLNVNCQ 78 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 78 (445)
|+|++.++.||++|. +|+++|.++|++|+|++..... +...-..++.+..++-. .+ +.+. .+. ...
T Consensus 8 i~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~v~--------G~~~~l~--~~~-~~~ 75 (385)
T TIGR00215 8 IALVAGEASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAAEGCEVLYSMEELSVM--------GLREVLG--RLG-RLL 75 (385)
T ss_pred EEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHhCcCccccChHHhhhc--------cHHHHHH--HHH-HHH
Confidence 456777888999999 9999999999999999874221 11000012333333310 11 1111 111 111
Q ss_pred hHHHHHHHHHHhhccCCCCCCCCceEEEEcCCC-CchHH--HHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCC
Q 013342 79 APFFECMVRMMEQQQQHPAGDDQIACIIYDEIF-YFPEA--AANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQD 155 (445)
Q Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~-~~~~~--~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (445)
..+.+..+.+.+ . +||+||.-.+. +.... .|+.+|||++.+.+--. +.+..
T Consensus 76 ~~~~~~~~~l~~--------~-kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~~--------------waw~~--- 129 (385)
T TIGR00215 76 KIRKEVVQLAKQ--------A-KPDLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQV--------------WAWRK--- 129 (385)
T ss_pred HHHHHHHHHHHh--------c-CCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCcH--------------hhcCc---
Confidence 111222222222 1 99999964443 33333 78889999997432100 01100
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCC
Q 013342 156 PNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFA 235 (445)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~ 235 (445)
.+.+... +.++.++.....+-++ ++. .+.+..+||....+.
T Consensus 130 ------------------------~~~r~l~---------~~~d~v~~~~~~e~~~-----~~~-~g~~~~~vGnPv~~~ 170 (385)
T TIGR00215 130 ------------------------WRAKKIE---------KATDFLLAILPFEKAF-----YQK-KNVPCRFVGHPLLDA 170 (385)
T ss_pred ------------------------chHHHHH---------HHHhHhhccCCCcHHH-----HHh-cCCCEEEECCchhhh
Confidence 0000001 1223333322211111 122 235677888555332
Q ss_pred CCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCc
Q 013342 236 PFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLL 310 (445)
Q Consensus 236 ~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~ 310 (445)
.. ...+...+..+-+.-.+++++|.+-.||....-......++++++.+ +.++++..... ..
T Consensus 171 ~~----~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~---------~~ 237 (385)
T TIGR00215 171 IP----LYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNF---------KR 237 (385)
T ss_pred cc----ccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCc---------hh
Confidence 11 00011111222222224567888877877542123444566555443 22344443221 01
Q ss_pred hHHHH---HHhcCCcEEEEec-cHHHHhhccccCceeeccCchhHHHHHhhCCCcccC----Cccc---------chhhh
Q 013342 311 PEVLA---EAVQENGCIVKWA-PQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICR----PCFG---------DQRVN 373 (445)
Q Consensus 311 ~~~~~---~~~~~n~~~~~~~-pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~----P~~~---------DQ~~n 373 (445)
.+.+. +....+..+..+. ....+|..+|+ +|+-+|..|+ |++++|+|+|++ |+.. .|..|
T Consensus 238 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~ 314 (385)
T TIGR00215 238 RLQFEQIKAEYGPDLQLHLIDGDARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISL 314 (385)
T ss_pred HHHHHHHHHHhCCCCcEEEECchHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeec
Confidence 11221 1221122222221 34569999999 9999999988 999999999999 8742 38889
Q ss_pred HHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHH----HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 374 ARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGE----EMRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 374 a~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~----~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
++.++.+ ++...+.. ++|++.|.+++.++|+| + .++++.++--+++++.....|.++++++.+++
T Consensus 315 ~nil~~~-~~~pel~q~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~~ 384 (385)
T TIGR00215 315 PNILANR-LLVPELLQEECTPHPLAIALLLLLEN---GLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVLE 384 (385)
T ss_pred cHHhcCC-ccchhhcCCCCCHHHHHHHHHHHhcC---CcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhh
Confidence 9999995 99999876 89999999999999999 5 55655555555555555556788888877765
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.61 E-value=2.7e-14 Score=139.88 Aligned_cols=162 Identities=15% Similarity=0.200 Sum_probs=109.2
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhC-CCCEEEEECCCCCCCCCccCCchHHHHH---HhcCCcEEEEeccH-HH
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNS-KQPFLWVIRPSSNNAPEGIDLLPEVLAE---AVQENGCIVKWAPQ-KE 332 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~n~~~~~~~pq-~~ 332 (445)
++++++++..|+... .+.+..+++++.+. +.+++++.+.+ +.+.+.+.+ ..++|+.+.+|+++ .+
T Consensus 200 ~~~~~il~~~G~~~~--~k~~~~li~~l~~~~~~~~viv~G~~--------~~~~~~l~~~~~~~~~~v~~~g~~~~~~~ 269 (380)
T PRK13609 200 PNKKILLIMAGAHGV--LGNVKELCQSLMSVPDLQVVVVCGKN--------EALKQSLEDLQETNPDALKVFGYVENIDE 269 (380)
T ss_pred CCCcEEEEEcCCCCC--CcCHHHHHHHHhhCCCcEEEEEeCCC--------HHHHHHHHHHHhcCCCcEEEEechhhHHH
Confidence 345678777777653 23456677777654 34666665322 111122222 22358899999987 47
Q ss_pred HhhccccCceeeccCchhHHHHHhhCCCcccC-CcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcHHH
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCEGVPMICR-PCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEGEE 411 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~-P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~ 411 (445)
++..+|+ +|+.+|..|+.||+++|+|+|+. |..+.|..|+..+++ .|.|+.. -++++|.++|.++++| +.
T Consensus 270 l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~---~~~~~l~~~i~~ll~~---~~ 340 (380)
T PRK13609 270 LFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVI---RDDEEVFAKTEALLQD---DM 340 (380)
T ss_pred HHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEE---CCHHHHHHHHHHHHCC---HH
Confidence 9999998 99999988999999999999985 677778899999998 4998865 3679999999999998 54
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 412 MRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 412 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
.+++ |++..++. ....+.++.++.+++
T Consensus 341 ~~~~---m~~~~~~~-~~~~s~~~i~~~i~~ 367 (380)
T PRK13609 341 KLLQ---MKEAMKSL-YLPEPADHIVDDILA 367 (380)
T ss_pred HHHH---HHHHHHHh-CCCchHHHHHHHHHH
Confidence 4433 33444332 112344444444443
No 38
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.57 E-value=1.2e-13 Score=128.48 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=77.9
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCC--CCEEEEECCCCCCCCCccCCchHHHHHH--hcCCcEEEEeccHH-HHh
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSK--QPFLWVIRPSSNNAPEGIDLLPEVLAEA--VQENGCIVKWAPQK-EVL 334 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~pq~-~lL 334 (445)
.+.|++++|.... ......+++++.+.. .++.+++++.. ...+.+.+. ...|+.+..++++. ++|
T Consensus 170 ~~~iLi~~GG~d~--~~~~~~~l~~l~~~~~~~~i~vv~G~~~--------~~~~~l~~~~~~~~~i~~~~~~~~m~~lm 239 (279)
T TIGR03590 170 LRRVLVSFGGADP--DNLTLKLLSALAESQINISITLVTGSSN--------PNLDELKKFAKEYPNIILFIDVENMAELM 239 (279)
T ss_pred cCeEEEEeCCcCC--cCHHHHHHHHHhccccCceEEEEECCCC--------cCHHHHHHHHHhCCCEEEEeCHHHHHHHH
Confidence 3578999996653 234566778887643 46677765431 112223221 23588888999985 799
Q ss_pred hccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHH
Q 013342 335 SHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARY 376 (445)
Q Consensus 335 ~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~ 376 (445)
..+|+ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 240 ~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 240 NEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 99999 999999 9999999999999999999999999975
No 39
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.54 E-value=2.6e-16 Score=135.36 Aligned_cols=135 Identities=21% Similarity=0.232 Sum_probs=94.2
Q ss_pred eEEEEecccccC-ChhhHHHHHHHHHh--CCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEecc-HHHHhhcc
Q 013342 262 VIYVSLGSVASM-DKKEPEEMAWGLVN--SKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAP-QKEVLSHV 337 (445)
Q Consensus 262 ~v~vs~Gs~~~~-~~~~~~~~~~al~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p-q~~lL~~~ 337 (445)
+|+|+.||.... -.+....++..+.. ...+++++++.... ......+ .....|+.+.+|++ ..+++..+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~------~~~~~~~-~~~~~~v~~~~~~~~m~~~m~~a 73 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNY------EELKIKV-ENFNPNVKVFGFVDNMAELMAAA 73 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCEC------HHHCCCH-CCTTCCCEEECSSSSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcH------HHHHHHH-hccCCcEEEEechhhHHHHHHHc
Confidence 589999987642 01112222333322 24677777754310 0001111 11126788999999 78899999
Q ss_pred ccCceeeccCchhHHHHHhhCCCcccCCccc----chhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcC
Q 013342 338 AVGGFWSHCGWNSTLECLCEGVPMICRPCFG----DQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVG 406 (445)
Q Consensus 338 ~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~----DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~ 406 (445)
|+ +|||||.||++|++++|+|+|++|... ||..||..+++ .|+|..+.. ..+.+.|.++|.+++++
T Consensus 74 Dl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~~~~~~~~~L~~~i~~l~~~ 144 (167)
T PF04101_consen 74 DL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLDESELNPEELAEAIEELLSD 144 (167)
T ss_dssp SE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSECCC-SCCCHHHHHHCHCCC
T ss_pred CE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccCcccCCHHHHHHHHHHHHcC
Confidence 99 999999999999999999999999988 99999999999 599999987 77899999999999998
No 40
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.51 E-value=1.5e-12 Score=127.62 Aligned_cols=105 Identities=17% Similarity=0.125 Sum_probs=67.3
Q ss_pred HHHHhhccccCceeeccCchhHHHHHhhCCCcccCCccc--------chhhh-----HHHHHhhheeeeEeCc-ccCHHH
Q 013342 330 QKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFG--------DQRVN-----ARYVSHVWRTGLELEN-ELEREV 395 (445)
Q Consensus 330 q~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~--------DQ~~n-----a~~v~~~~G~g~~~~~-~~t~~~ 395 (445)
-..++..+|+ +|+.+|.+++ |++++|+|+|++|... +|..| +..++.. +++..+.. ..+++.
T Consensus 255 ~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~ 330 (380)
T PRK00025 255 KREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-ELVPELLQEEATPEK 330 (380)
T ss_pred HHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-CcchhhcCCCCCHHH
Confidence 3568999999 9999998887 9999999999995321 22222 3444442 44444443 689999
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 396 VEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 396 l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
|.+++.++++| +..++...+-.+.+++.. ..|+..+.++.+.+
T Consensus 331 l~~~i~~ll~~---~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~ 373 (380)
T PRK00025 331 LARALLPLLAD---GARRQALLEGFTELHQQL-RCGADERAAQAVLE 373 (380)
T ss_pred HHHHHHHHhcC---HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHH
Confidence 99999999999 544443333332233332 22555555554443
No 41
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.45 E-value=6e-12 Score=123.43 Aligned_cols=147 Identities=22% Similarity=0.246 Sum_probs=102.9
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhC--CCCEEEEECCCCCCCCCccCCchHHHHHH--hcCCcEEEEeccH-HH
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNS--KQPFLWVIRPSSNNAPEGIDLLPEVLAEA--VQENGCIVKWAPQ-KE 332 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~pq-~~ 332 (445)
+++++|+++.|+... .+.+..+++++.+. +.+++++++.+ ..+-+.+.+. ..+++.+.+|+++ .+
T Consensus 200 ~~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~--------~~l~~~l~~~~~~~~~v~~~G~~~~~~~ 269 (391)
T PRK13608 200 PDKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKS--------KELKRSLTAKFKSNENVLILGYTKHMNE 269 (391)
T ss_pred CCCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCC--------HHHHHHHHHHhccCCCeEEEeccchHHH
Confidence 456788888887752 24455566664332 34565555322 1111222222 2357888899976 46
Q ss_pred HhhccccCceeeccCchhHHHHHhhCCCcccC-CcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcHHH
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCEGVPMICR-PCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEGEE 411 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~-P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~ 411 (445)
+|..+|+ +|+..|..|+.||+++|+|+|++ |..++|..|+..+++. |+|+... +.+++.++|.++++| +.
T Consensus 270 ~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~---~~~~l~~~i~~ll~~---~~ 340 (391)
T PRK13608 270 WMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD---TPEEAIKIVASLTNG---NE 340 (391)
T ss_pred HHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC---CHHHHHHHHHHHhcC---HH
Confidence 9999999 99998888999999999999998 7777788999999995 9998764 788999999999998 32
Q ss_pred HHHHHHHHHHHHHHH
Q 013342 412 MRQRAKNLKEEIELC 426 (445)
Q Consensus 412 ~~~~a~~l~~~~~~~ 426 (445)
..++|++.+++.
T Consensus 341 ---~~~~m~~~~~~~ 352 (391)
T PRK13608 341 ---QLTNMISTMEQD 352 (391)
T ss_pred ---HHHHHHHHHHHh
Confidence 334444554443
No 42
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.45 E-value=2.3e-11 Score=119.06 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=76.9
Q ss_pred CCcEEEEeccH-HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchh-hhHHHHHhhheeeeEeCcccCHHHHH
Q 013342 320 ENGCIVKWAPQ-KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQR-VNARYVSHVWRTGLELENELEREVVE 397 (445)
Q Consensus 320 ~n~~~~~~~pq-~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~-~na~~v~~~~G~g~~~~~~~t~~~l~ 397 (445)
.++.+.+|+++ .++|..+|+ +|+.+|.+|++||+++|+|+|+.+....|. .|+..+.+. |.|+.+ -++++|.
T Consensus 265 ~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~---~~~~~la 338 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFS---ESPKEIA 338 (382)
T ss_pred CCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-Cceeec---CCHHHHH
Confidence 46788899986 559999999 999999999999999999999998765665 799999985 999865 4889999
Q ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 398 KAVRRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 398 ~ai~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
++|.++++|. .+..++|++..++.
T Consensus 339 ~~i~~ll~~~-----~~~~~~m~~~~~~~ 362 (382)
T PLN02605 339 RIVAEWFGDK-----SDELEAMSENALKL 362 (382)
T ss_pred HHHHHHHcCC-----HHHHHHHHHHHHHh
Confidence 9999999872 22334455555543
No 43
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.42 E-value=1.9e-10 Score=112.45 Aligned_cols=328 Identities=15% Similarity=0.066 Sum_probs=180.8
Q ss_pred CccChHHHHHHHHHHHh--CCCeEE---EEeCCCCCCC-CCCCCCceEEEcCC-CCCCCCCCCCh-hHHHHHHHHH-hcc
Q 013342 8 FQGHMTPMLQLGTILYS--NGFSIT---VVHTHFNPPN-PSNHPEFNFQSIPD-GLTADDVSTGI-NILITNLLNV-NCQ 78 (445)
Q Consensus 8 ~~GH~~p~l~La~~L~~--~Gh~Vt---~~~~~~~~~~-~~~~~~~~~~~l~~-~~~~~~~~~~~-~~~~~~~~~~-~~~ 78 (445)
++|-=.-.++||++|.+ .|++|. ++++....+. .....| .+..+|. ++... .+ ..+. .... ...
T Consensus 6 ghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~ip~~g-~~~~~~sgg~~~~----~~~~~~~--~~~~gl~~ 78 (396)
T TIGR03492 6 GHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQNLGIPIIG-PTKELPSGGFSYQ----SLRGLLR--DLRAGLVG 78 (396)
T ss_pred CchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhhCCCceeC-CCCCCCCCCccCC----CHHHHHH--HHHhhHHH
Confidence 45544557899999998 699999 9988644333 222234 5555553 22111 22 3332 2222 111
Q ss_pred hHHH--HHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCC
Q 013342 79 APFF--ECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDP 156 (445)
Q Consensus 79 ~~~~--~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 156 (445)
..+. .+++++.+ +||+||+-.-+. ...+|..+|+|++.+.+.-..... . +..+. +.
T Consensus 79 ~~~~~~~~~~~~~~----------~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn~~~---~----~~~~~-~~--- 136 (396)
T TIGR03492 79 LTLGQWRALRKWAK----------KGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSDYYW---E----SGPRR-SP--- 136 (396)
T ss_pred HHHHHHHHHHHHhh----------cCCEEEEECcHH-HHHHHHHcCCCceEEEeeccceee---c----CCCCC-cc---
Confidence 1111 14444422 899999875555 778899999999986553321110 0 00000 10
Q ss_pred CCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCCC
Q 013342 157 NKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAP 236 (445)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~ 236 (445)
++...+.++.....+ +..++ ..+.++.++...-. ..+++++ .+.++.+||-...+.-
T Consensus 137 ~~~~~~~~G~~~~p~------------e~n~l-----~~~~a~~v~~~~~~-----t~~~l~~-~g~k~~~vGnPv~d~l 193 (396)
T TIGR03492 137 SDEYHRLEGSLYLPW------------ERWLM-----RSRRCLAVFVRDRL-----TARDLRR-QGVRASYLGNPMMDGL 193 (396)
T ss_pred chhhhccCCCccCHH------------HHHHh-----hchhhCEEeCCCHH-----HHHHHHH-CCCeEEEeCcCHHhcC
Confidence 222223333211100 00000 11334555554421 1222333 3368999996654432
Q ss_pred CCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC----CCCEEEEECCCCCCCCCccCCchH
Q 013342 237 FSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS----KQPFLWVIRPSSNNAPEGIDLLPE 312 (445)
Q Consensus 237 ~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~v~~~~~~~~~~~~~~~~~~~ 312 (445)
. .... .-++ ++++++.+--||-.......+..++++++.+ +..+++.+.++.. . +
T Consensus 194 ~-------~~~~---~~l~--~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~--------~-~ 252 (396)
T TIGR03492 194 E-------PPER---KPLL--TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLS--------L-E 252 (396)
T ss_pred c-------cccc---cccC--CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCC--------H-H
Confidence 1 0010 0112 3456888888887553333455666666654 4567777633210 1 1
Q ss_pred HHHHHhc-------------------CCcEEEEecc-HHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhh
Q 013342 313 VLAEAVQ-------------------ENGCIVKWAP-QKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRV 372 (445)
Q Consensus 313 ~~~~~~~-------------------~n~~~~~~~p-q~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~ 372 (445)
.+.+... +++.+..+.. ..++|..+++ +|+-+|..| .|++..|+|+|++|....|.
T Consensus 253 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~- 328 (396)
T TIGR03492 253 KLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF- 328 (396)
T ss_pred HHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-
Confidence 1111111 1244555543 4669999999 999999766 99999999999999887886
Q ss_pred hHHHHHhhh----eeeeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 013342 373 NARYVSHVW----RTGLELENELEREVVEKAVRRLMVGEEGEEMRQRAK 417 (445)
Q Consensus 373 na~~v~~~~----G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~ 417 (445)
||...++ . |.++.+.. .+.+.|.+++.++++| +...++..
T Consensus 329 na~~~~~-~~~l~g~~~~l~~-~~~~~l~~~l~~ll~d---~~~~~~~~ 372 (396)
T TIGR03492 329 TYGFAEA-QSRLLGGSVFLAS-KNPEQAAQVVRQLLAD---PELLERCR 372 (396)
T ss_pred HHHHHHh-hHhhcCCEEecCC-CCHHHHHHHHHHHHcC---HHHHHHHH
Confidence 8877766 3 66666654 5569999999999998 54444333
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.42 E-value=7.5e-10 Score=107.05 Aligned_cols=334 Identities=15% Similarity=0.107 Sum_probs=174.4
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcchHHHHHHHHH
Q 013342 9 QGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVSTGINILITNLLNVNCQAPFFECMVRM 88 (445)
Q Consensus 9 ~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 88 (445)
.|+...+..|+++|.++||+|++++........... ....++....... . ...+.. .....+...++..
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~-~~~~~~------~~~~~~~~~~~~~ 82 (364)
T cd03814 14 NGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA---RVVPVPSVPLPGY-P-EIRLAL------PPRRRVRRLLDAF 82 (364)
T ss_pred cceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC---CceeecccccCcc-c-ceEecc------cchhhHHHHHHhc
Confidence 789999999999999999999999985432221111 1111111000000 0 000000 0011111222222
Q ss_pred HhhccCCCCCCCCceEEEEcCCC---CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCCCCCcCCCC
Q 013342 89 MEQQQQHPAGDDQIACIIYDEIF---YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNKLQDPVPG 165 (445)
Q Consensus 89 ~~~~~~~~~~~~~~D~vv~D~~~---~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 165 (445)
+||+|++.... ..+..+++..++|++........... . ... . .
T Consensus 83 ------------~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~------~~~----~-----~---- 128 (364)
T cd03814 83 ------------APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYL---R------YYG----L-----G---- 128 (364)
T ss_pred ------------CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHh---h------hcc----c-----c----
Confidence 89999876443 33556778899999875443211100 0 000 0 0
Q ss_pred CCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCCCCCCCCCCcC
Q 013342 166 LHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLN 245 (445)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~ 245 (445)
........+. ......++.++..+....+. .......++..+.+....... ....
T Consensus 129 ---------------~~~~~~~~~~-~~~~~~~d~i~~~s~~~~~~-----~~~~~~~~~~~~~~g~~~~~~----~~~~ 183 (364)
T cd03814 129 ---------------PLSWLAWAYL-RWFHNRADRVLVPSPSLADE-----LRARGFRRVRLWPRGVDTELF----HPRR 183 (364)
T ss_pred ---------------hHhHhhHHHH-HHHHHhCCEEEeCCHHHHHH-----HhccCCCceeecCCCcccccc----Cccc
Confidence 0000000000 12235678888887755442 122222344444433321111 0000
Q ss_pred CCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCC----CCEEEEECCCCCCCCCccCCchHHHHHHhcCC
Q 013342 246 EDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSK----QPFLWVIRPSSNNAPEGIDLLPEVLAEAVQEN 321 (445)
Q Consensus 246 ~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n 321 (445)
......+-+. ..++.+++..|++.. .+....++++++++. ..+++. +.+. ....+. ...+|
T Consensus 184 ~~~~~~~~~~--~~~~~~i~~~G~~~~--~k~~~~~i~~~~~l~~~~~~~l~i~-G~~~---------~~~~~~-~~~~~ 248 (364)
T cd03814 184 RDEALRARLG--PPDRPVLLYVGRLAP--EKNLEALLDADLPLRRRPPVRLVIV-GDGP---------ARARLE-ARYPN 248 (364)
T ss_pred ccHHHHHHhC--CCCCeEEEEEecccc--ccCHHHHHHHHHHhhhcCCceEEEE-eCCc---------hHHHHh-ccCCc
Confidence 0100111111 233466777887653 234445555555542 334333 2220 111111 24578
Q ss_pred cEEEEeccHHH---HhhccccCceeeccC----chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 322 GCIVKWAPQKE---VLSHVAVGGFWSHCG----WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 322 ~~~~~~~pq~~---lL~~~~~~~~I~HgG----~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
+.+.+|+++.+ ++..+++ +|+.+. .++++||+++|+|+|+.+..+ +...+++ .+.|...+. -+.+
T Consensus 249 v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~~~-~~~~ 320 (364)
T cd03814 249 VHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLVEP-GDAE 320 (364)
T ss_pred EEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEcCC-CCHH
Confidence 89999999766 7889998 887664 378999999999999887553 5666777 488988765 5778
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHH-HHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 395 VVEKAVRRLMVGEEGEEMRQRAKN-LKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 395 ~l~~ai~~ll~~~~~~~~~~~a~~-l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
++.++|.++++| +..+++..+ ..+.+++ -+.++.++++++-
T Consensus 321 ~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 362 (364)
T cd03814 321 AFAAALAALLAD---PELRRRMAARARAEAER-----RSWEAFLDNLLEA 362 (364)
T ss_pred HHHHHHHHHHcC---HHHHHHHHHHHHHHHhh-----cCHHHHHHHHHHh
Confidence 899999999998 443333222 2222222 4666666666653
No 45
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.28 E-value=1.9e-08 Score=99.17 Aligned_cols=80 Identities=16% Similarity=0.157 Sum_probs=61.7
Q ss_pred cCCcEEEEeccHHH---HhhccccCceee---ccCc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCccc
Q 013342 319 QENGCIVKWAPQKE---VLSHVAVGGFWS---HCGW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENEL 391 (445)
Q Consensus 319 ~~n~~~~~~~pq~~---lL~~~~~~~~I~---HgG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~ 391 (445)
.+++.+.+++|+.+ +|..+++ +|. +.|. .++.||+++|+|+|+. |...+...+... ..|..++. -
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv--~v~~s~~e~~~~~llEAmA~G~PVIas----~~~g~~e~i~~~-~~G~lv~~-~ 351 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDV--HVYLTYPFVLSWSLLEAMACGCLVVGS----DTAPVREVITDG-ENGLLVDF-F 351 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcE--EEEcCcccccchHHHHHHHCCCCEEEc----CCCCchhhcccC-CceEEcCC-C
Confidence 36788999999866 6778888 653 2232 3799999999999986 444566777773 67877764 5
Q ss_pred CHHHHHHHHHHHhcC
Q 013342 392 EREVVEKAVRRLMVG 406 (445)
Q Consensus 392 t~~~l~~ai~~ll~~ 406 (445)
++++++++|.++++|
T Consensus 352 d~~~la~~i~~ll~~ 366 (396)
T cd03818 352 DPDALAAAVIELLDD 366 (396)
T ss_pred CHHHHHHHHHHHHhC
Confidence 789999999999998
No 46
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.26 E-value=1.1e-08 Score=98.48 Aligned_cols=130 Identities=18% Similarity=0.143 Sum_probs=84.2
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHH---
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKE--- 332 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~--- 332 (445)
+++.+++..|+... .+....++++++.+ +.++++. +.+.. ...........+++.+.+++++.+
T Consensus 189 ~~~~~i~~~G~~~~--~k~~~~li~~~~~l~~~~~~l~i~-G~~~~-------~~~~~~~~~~~~~v~~~g~~~~~~~~~ 258 (359)
T cd03823 189 GGRLRFGFIGQLTP--HKGVDLLLEAFKRLPRGDIELVIV-GNGLE-------LEEESYELEGDPRVEFLGAYPQEEIDD 258 (359)
T ss_pred CCceEEEEEecCcc--ccCHHHHHHHHHHHHhcCcEEEEE-cCchh-------hhHHHHhhcCCCeEEEeCCCCHHHHHH
Confidence 44567777887653 33455566666554 3444433 22210 000000012347888999998665
Q ss_pred HhhccccCceeec----cCc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 333 VLSHVAVGGFWSH----CGW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 333 lL~~~~~~~~I~H----gG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
++..+++ +|+. .|. .++.||+++|+|+|+.+. ..+...+... +.|...+. -+.+++.+++.++++|
T Consensus 259 ~~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~-~d~~~l~~~i~~l~~~ 329 (359)
T cd03823 259 FYAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDI----GGMAELVRDG-VNGLLFPP-GDAEDLAAALERLIDD 329 (359)
T ss_pred HHHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCC----CCHHHHhcCC-CcEEEECC-CCHHHHHHHHHHHHhC
Confidence 6888998 6632 333 479999999999998754 4566677773 67887765 4689999999999998
No 47
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.26 E-value=3.1e-08 Score=99.67 Aligned_cols=127 Identities=13% Similarity=0.117 Sum_probs=84.2
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhCC-CCEEEEECCCCCCCCCccCCchHHHHHHh-cCCcEEEEeccHHH---Hhh
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNSK-QPFLWVIRPSSNNAPEGIDLLPEVLAEAV-QENGCIVKWAPQKE---VLS 335 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~~pq~~---lL~ 335 (445)
..+++..|++. ..+....+++++++.+ .+++++ +.+ ...+.+.+.. ..++.+.+++++.+ +|.
T Consensus 263 ~~~i~~vGrl~--~~K~~~~li~a~~~~~~~~l~iv-G~G---------~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~ 330 (465)
T PLN02871 263 KPLIVYVGRLG--AEKNLDFLKRVMERLPGARLAFV-GDG---------PYREELEKMFAGTPTVFTGMLQGDELSQAYA 330 (465)
T ss_pred CeEEEEeCCCc--hhhhHHHHHHHHHhCCCcEEEEE-eCC---------hHHHHHHHHhccCCeEEeccCCHHHHHHHHH
Confidence 35556778765 3445666788887764 344433 221 1122333222 35788889998655 888
Q ss_pred ccccCceeeccC----chhHHHHHhhCCCcccCCcccchhhhHHHHHh---hheeeeEeCcccCHHHHHHHHHHHhcCC
Q 013342 336 HVAVGGFWSHCG----WNSTLECLCEGVPMICRPCFGDQRVNARYVSH---VWRTGLELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 336 ~~~~~~~I~HgG----~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~---~~G~g~~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
.+|+ +|.-.. -.++.||+++|+|+|+.... .....+++ . +.|..++. -++++++++|.++++|+
T Consensus 331 ~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv~~~~~~-~~G~lv~~-~d~~~la~~i~~ll~~~ 401 (465)
T PLN02871 331 SGDV--FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDIIPPDQEG-KTGFLYTP-GDVDDCVEKLETLLADP 401 (465)
T ss_pred HCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhhhcCCCC-CceEEeCC-CCHHHHHHHHHHHHhCH
Confidence 8998 775433 34688999999999987653 23444554 4 77887764 47899999999999983
No 48
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.25 E-value=1.4e-08 Score=99.85 Aligned_cols=322 Identities=15% Similarity=0.139 Sum_probs=166.2
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC---CCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcchHHHHHH
Q 013342 9 QGHMTPMLQLGTILYSNGFSITVVHTHFNPPN---PSNHPEFNFQSIPDGLTADDVSTGINILITNLLNVNCQAPFFECM 85 (445)
Q Consensus 9 ~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (445)
-|.-..+..|++.|+++||+|++++....... .....++.++.++..... ..... .+.. .+.... ..+.
T Consensus 21 GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~--~~~~~~----~~~~ 92 (398)
T cd03800 21 GGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAE-YLPKE-ELWP--YLDEFA----DDLL 92 (398)
T ss_pred CceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEeccccccc-CCChh-hcch--hHHHHH----HHHH
Confidence 46777899999999999999999986433222 123356777766532111 00000 1111 111111 1122
Q ss_pred HHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCCCCCcCC
Q 013342 86 VRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNKLQDPV 163 (445)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 163 (445)
..+.+... +||+|++.... ..+..+++.+++|++........ .. .
T Consensus 93 ~~~~~~~~-------~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~--------------~~----~-------- 139 (398)
T cd03800 93 RFLRREGG-------RPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGA--------------VK----R-------- 139 (398)
T ss_pred HHHHhcCC-------CccEEEEecCccchHHHHHHhhcCCceEEEeecccc--------------cC----C--------
Confidence 22222222 88999987544 34556788899998863221100 00 0
Q ss_pred CCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccC---CCceeeccCCCCCCCCCC
Q 013342 164 PGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ---VPIFPIGPFHKFAPFSTS 240 (445)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~---~~~~~vGp~~~~~~~~~~ 240 (445)
... ..... .. ...........+..++.++..+....+.- ...+. .++..|.+-......
T Consensus 140 ~~~-~~~~~----~~-----~~~~~~~~~~~~~~ad~ii~~s~~~~~~~-----~~~~~~~~~~~~vi~ng~~~~~~--- 201 (398)
T cd03800 140 RHL-GAADT----YE-----PARRIEAEERLLRAADRVIASTPQEAEEL-----YSLYGAYPRRIRVVPPGVDLERF--- 201 (398)
T ss_pred ccc-ccccc----cc-----hhhhhhHHHHHHhhCCEEEEcCHHHHHHH-----HHHccccccccEEECCCCCccce---
Confidence 000 00000 00 00000000223466888888876543321 22121 224455443322111
Q ss_pred CCCcCCCch-hchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCC-----CCEEEEECCCCCCCCCccCCchH--
Q 013342 241 CNFLNEDTS-CISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSK-----QPFLWVIRPSSNNAPEGIDLLPE-- 312 (445)
Q Consensus 241 ~~~~~~~~~-l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~v~~~~~~~~~~~~~~~~~~~-- 312 (445)
........ ...+.. .++..+++..|+... .+....+++++..+. ..++++-+.. ... ......
T Consensus 202 -~~~~~~~~~~~~~~~--~~~~~~i~~~gr~~~--~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~-~~~---~~~~~~~~ 272 (398)
T cd03800 202 -TPYGRAEARRARLLR--DPDKPRILAVGRLDP--RKGIDTLIRAYAELPELRERANLVIVGGPR-DDI---LAMDEEEL 272 (398)
T ss_pred -ecccchhhHHHhhcc--CCCCcEEEEEccccc--ccCHHHHHHHHHHHHHhCCCeEEEEEECCC-Ccc---hhhhhHHH
Confidence 00000000 111111 233466778888753 334455566665432 3444443221 110 000001
Q ss_pred -HHHHH--hcCCcEEEEeccHHH---HhhccccCceeecc---C-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhhe
Q 013342 313 -VLAEA--VQENGCIVKWAPQKE---VLSHVAVGGFWSHC---G-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWR 382 (445)
Q Consensus 313 -~~~~~--~~~n~~~~~~~pq~~---lL~~~~~~~~I~Hg---G-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G 382 (445)
.+.+. ..+++.+.+|+|+.+ ++..+++ +++.+ | -.++.||+++|+|+|+.... .....+++. +
T Consensus 273 ~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~~~e~i~~~-~ 345 (398)
T cd03800 273 RELARELGVIDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVG----GPRDIVVDG-V 345 (398)
T ss_pred HHHHHhcCCCceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCC----CHHHHccCC-C
Confidence 11111 236788899999876 5888998 77442 2 35899999999999987543 356667773 7
Q ss_pred eeeEeCcccCHHHHHHHHHHHhcC
Q 013342 383 TGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 383 ~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.|...+. -+.++++++|.++++|
T Consensus 346 ~g~~~~~-~~~~~l~~~i~~l~~~ 368 (398)
T cd03800 346 TGLLVDP-RDPEALAAALRRLLTD 368 (398)
T ss_pred CeEEeCC-CCHHHHHHHHHHHHhC
Confidence 8888765 4789999999999998
No 49
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.24 E-value=1.8e-12 Score=107.85 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=78.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCC--CCCCCCCC-Ch-hHHHHHHHHHh
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDG--LTADDVST-GI-NILITNLLNVN 76 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~-~~-~~~~~~~~~~~ 76 (445)
|+|++.|+.||++|+++||++|++|||+|++++++...+.+ ...|++|+.++.. .+...... .+ .... . ...
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v-~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~ 76 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERV-EAAGLEFVPIPGDSRLPRSLEPLANLRRLAR--L-IRG 76 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHH-HHTT-EEEESSSCGGGGHHHHHHHHHHCHHH--H-HHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceecc-cccCceEEEecCCcCcCcccchhhhhhhHHH--H-hhh
Confidence 68999999999999999999999999999999986544444 5679999999865 11100000 11 1111 0 001
Q ss_pred cchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHH
Q 013342 77 CQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAA 134 (445)
Q Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~ 134 (445)
. ..+.+.+.....+.-..-.+....|+++++.....+..+|++++||++.....+.+
T Consensus 77 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 77 L-EEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp H-HHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred h-hHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 1 11112222222110000011225788888887788999999999999997766543
No 50
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.20 E-value=3.9e-08 Score=95.14 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=61.9
Q ss_pred cCCcEEEEeccHHH---HhhccccCceeecc----CchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCccc
Q 013342 319 QENGCIVKWAPQKE---VLSHVAVGGFWSHC----GWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENEL 391 (445)
Q Consensus 319 ~~n~~~~~~~pq~~---lL~~~~~~~~I~Hg----G~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~ 391 (445)
.+++.+.+++|+.+ ++..+++ +|..+ ...++.||+++|+|+|+... ...+..+++. +.|..++. -
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~~-~~g~~~~~-~ 329 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVADG-ENGFLFPP-G 329 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheecC-ceeEEeCC-C
Confidence 47888999999865 7888998 77443 34689999999999998753 4566777774 78888865 2
Q ss_pred CHHHHHHHHHHHhcCC
Q 013342 392 EREVVEKAVRRLMVGE 407 (445)
Q Consensus 392 t~~~l~~ai~~ll~~~ 407 (445)
+. ++.+++.++++|+
T Consensus 330 ~~-~~~~~i~~l~~~~ 344 (374)
T cd03817 330 DE-ALAEALLRLLQDP 344 (374)
T ss_pred CH-HHHHHHHHHHhCh
Confidence 22 9999999999983
No 51
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.20 E-value=8.2e-08 Score=92.33 Aligned_cols=335 Identities=16% Similarity=0.134 Sum_probs=178.1
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCC-CCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcchHHHHHHHH
Q 013342 9 QGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNH-PEFNFQSIPDGLTADDVSTGINILITNLLNVNCQAPFFECMVR 87 (445)
Q Consensus 9 ~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 87 (445)
.|+...+..|++.|.+.||+|++++........... ........ .......... ........+...+..
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~ 83 (374)
T cd03801 14 GGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRP-------PPLLRVRRLL---LLLLLALRLRRLLRR 83 (374)
T ss_pred CcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecC-------CcccccchhH---HHHHHHHHHHHHhhh
Confidence 689999999999999999999999985433331110 00000000 0000000000 001111111222332
Q ss_pred HHhhccCCCCCCCCceEEEEcCCCCchH--HHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCCCCCcCCCC
Q 013342 88 MMEQQQQHPAGDDQIACIIYDEIFYFPE--AAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNKLQDPVPG 165 (445)
Q Consensus 88 ~~~~~~~~~~~~~~~D~vv~D~~~~~~~--~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 165 (445)
. ++|+|++........ ..+...++|++........... . .
T Consensus 84 ~------------~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-----------~-----~---------- 125 (374)
T cd03801 84 E------------RFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRP-----------G-----N---------- 125 (374)
T ss_pred c------------CCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhcc-----------c-----c----------
Confidence 2 899999887664433 4777889999874432211100 0 0
Q ss_pred CCCCCCCCCCCcccccchHHHHHHHH--hhhccCCcEEEEcchhhhcHHHHHHHHhccCC---CceeeccCCCCCCCCCC
Q 013342 166 LHPLRFKDLPTYRHEIMEHYLQLITS--MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQV---PIFPIGPFHKFAPFSTS 240 (445)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~---~~~~vGp~~~~~~~~~~ 240 (445)
. .......... ......++.++..+....+. +...++. ++..+.........
T Consensus 126 --~-------------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~--- 182 (374)
T cd03801 126 --E-------------LGLLLKLARALERRALRRADRIIAVSEATREE-----LRELGGVPPEKITVIPNGVDTERF--- 182 (374)
T ss_pred --c-------------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHH-----HHhcCCCCCCcEEEecCccccccc---
Confidence 0 0000111111 23456778888888754442 3443433 45555543322111
Q ss_pred CCCcCCC-chhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCC---CEEEEECCCCCCCCCccCCchHHHHH
Q 013342 241 CNFLNED-TSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQ---PFLWVIRPSSNNAPEGIDLLPEVLAE 316 (445)
Q Consensus 241 ~~~~~~~-~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~ 316 (445)
... .....-.. ..++..+++.+|+.. ..+....+++++..... ++-+.+.++ +.....+..
T Consensus 183 ----~~~~~~~~~~~~-~~~~~~~i~~~g~~~--~~k~~~~~i~~~~~~~~~~~~~~l~i~G~--------~~~~~~~~~ 247 (374)
T cd03801 183 ----RPAPRAARRRLG-IPEDEPVILFVGRLV--PRKGVDLLLEALAKLRKEYPDVRLVIVGD--------GPLREELEA 247 (374)
T ss_pred ----CccchHHHhhcC-CcCCCeEEEEecchh--hhcCHHHHHHHHHHHhhhcCCeEEEEEeC--------cHHHHHHHH
Confidence 000 00011111 233446678888765 33345556666654322 233332211 111122211
Q ss_pred -----HhcCCcEEEEeccHHH---HhhccccCceee----ccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheee
Q 013342 317 -----AVQENGCIVKWAPQKE---VLSHVAVGGFWS----HCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTG 384 (445)
Q Consensus 317 -----~~~~n~~~~~~~pq~~---lL~~~~~~~~I~----HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g 384 (445)
..++++.+.+++++.+ +|..+++ +|. -|..+++.||+++|+|+|+.+. ...+..+++. +.|
T Consensus 248 ~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g 320 (374)
T cd03801 248 LAAELGLGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETG 320 (374)
T ss_pred HHHHhCCCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cce
Confidence 2457888999997654 7888998 663 2456799999999999998765 4567777764 788
Q ss_pred eEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 385 LELENELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 385 ~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
...+. .+++++.++|.++++|+ +.+++..++..+.+.+. =+.++.++++++.
T Consensus 321 ~~~~~-~~~~~l~~~i~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 372 (374)
T cd03801 321 LLVPP-GDPEALAEAILRLLDDP--ELRRRLGEAARERVAER----FSWDRVAARTEEV 372 (374)
T ss_pred EEeCC-CCHHHHHHHHHHHHcCh--HHHHHHHHHHHHHHHHh----cCHHHHHHHHHHh
Confidence 87765 56899999999999983 22333333333233333 3555666666553
No 52
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.18 E-value=2.1e-08 Score=97.46 Aligned_cols=315 Identities=15% Similarity=0.086 Sum_probs=162.1
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCC--------CCCCCceEEEcCCCCCCCCCCCCh-hHHHHHHHHHhcch
Q 013342 9 QGHMTPMLQLGTILYSNGFSITVVHTHFNPPNP--------SNHPEFNFQSIPDGLTADDVSTGI-NILITNLLNVNCQA 79 (445)
Q Consensus 9 ~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (445)
.|+-.....+++.|.++||+|++++........ ....++.+..++........ .+ .+.. .+ .....
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~-~~~~~ 88 (394)
T cd03794 14 GGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKKNG--LLKRLLN--YL-SFALS 88 (394)
T ss_pred CCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCccc--hHHHHHh--hh-HHHHH
Confidence 589999999999999999999999875333321 12246666666532211110 11 1111 11 11111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCceEEEEcCCC----CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCC
Q 013342 80 PFFECMVRMMEQQQQHPAGDDQIACIIYDEIF----YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQD 155 (445)
Q Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~----~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (445)
....+.... . +||+|++.... ..+..++...++|++............. ...
T Consensus 89 ----~~~~~~~~~------~-~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~--------~~~----- 144 (394)
T cd03794 89 ----ALLALLKRR------R-RPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVA--------LGL----- 144 (394)
T ss_pred ----HHHHHHhcc------c-CCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHH--------ccC-----
Confidence 111111111 2 89999998622 2233455666899987433211000000 000
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH--hhhccCCcEEEEcchhhhcHHHHHHHH-hcc-CCCceeeccC
Q 013342 156 PNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS--MYKIRTSSAVIWNTMHYLEESSLAQLQ-QQC-QVPIFPIGPF 231 (445)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~n~~~~le~~~~~~~~-~~~-~~~~~~vGp~ 231 (445)
.. ......+.... ...+..++.++..+....+. +. ... ..++..+...
T Consensus 145 -------------~~----------~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~-----~~~~~~~~~~~~~i~~~ 196 (394)
T cd03794 145 -------------LK----------NGSLLYRLLRKLERLIYRRADAIVVISPGMREY-----LVRRGVPPEKISVIPNG 196 (394)
T ss_pred -------------cc----------ccchHHHHHHHHHHHHHhcCCEEEEECHHHHHH-----HHhcCCCcCceEEcCCC
Confidence 00 00000011111 23346678888877644432 22 112 1345555433
Q ss_pred CCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC----CCCEEEEECCCCCCCCCcc
Q 013342 232 HKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS----KQPFLWVIRPSSNNAPEGI 307 (445)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~v~~~~~~~~~~~~~~ 307 (445)
...... ..........+.. ..+++.+++..|+... .+....++++++.+ +.++++ ++.+
T Consensus 197 ~~~~~~----~~~~~~~~~~~~~--~~~~~~~i~~~G~~~~--~k~~~~l~~~~~~l~~~~~~~l~i-~G~~-------- 259 (394)
T cd03794 197 VDLELF----KPPPADESLRKEL--GLDDKFVVLYAGNIGR--AQGLDTLLEAAALLKDRPDIRFLI-VGDG-------- 259 (394)
T ss_pred CCHHHc----CCccchhhhhhcc--CCCCcEEEEEecCccc--ccCHHHHHHHHHHHhhcCCeEEEE-eCCc--------
Confidence 322111 0000000001111 2344577788887754 33444455555443 334333 3222
Q ss_pred CCchHHHH----HHhcCCcEEEEeccHHH---HhhccccCceeeccC---------chhHHHHHhhCCCcccCCcccchh
Q 013342 308 DLLPEVLA----EAVQENGCIVKWAPQKE---VLSHVAVGGFWSHCG---------WNSTLECLCEGVPMICRPCFGDQR 371 (445)
Q Consensus 308 ~~~~~~~~----~~~~~n~~~~~~~pq~~---lL~~~~~~~~I~HgG---------~gsv~eal~~GvP~v~~P~~~DQ~ 371 (445)
...+.+. ....+|+.+.+++++.+ ++..+++ +|.... -+++.||+++|+|+|+.+..+.+.
T Consensus 260 -~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~ 336 (394)
T cd03794 260 -PEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE 336 (394)
T ss_pred -ccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh
Confidence 1112221 22347888899998765 7888998 664333 234799999999999987765433
Q ss_pred hhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 372 VNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 372 ~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+.. .+.|..++. -+.++++++|.++++|
T Consensus 337 ----~~~~-~~~g~~~~~-~~~~~l~~~i~~~~~~ 365 (394)
T cd03794 337 ----LVEE-AGAGLVVPP-GDPEALAAAILELLDD 365 (394)
T ss_pred ----hhcc-CCcceEeCC-CCHHHHHHHHHHHHhC
Confidence 4445 266766664 4789999999999988
No 53
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.17 E-value=3.6e-08 Score=97.62 Aligned_cols=128 Identities=19% Similarity=0.240 Sum_probs=80.2
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCC---------CCEEEEECCCCCCCCCccCCchHHHHHH---hc-CCcEEE
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSK---------QPFLWVIRPSSNNAPEGIDLLPEVLAEA---VQ-ENGCIV 325 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~-~n~~~~ 325 (445)
++..++++.|.+. ..+.+..+++|++.+. .++.+.+.++ +...+.+.+. .. +|+.+.
T Consensus 230 ~~~~vi~~~grl~--~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~--------G~~~~~l~~~~~~~~l~~~~~~ 299 (415)
T cd03816 230 ERPALLVSSTSWT--PDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK--------GPLKEKYLERIKELKLKKVTIR 299 (415)
T ss_pred CCceEEEEecccc--CCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec--------CccHHHHHHHHHHcCCCcEEEE
Confidence 4456667777665 3455566666665431 1233333222 1112222222 22 455554
Q ss_pred -EeccHHH---HhhccccCceee-c---cC---chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 326 -KWAPQKE---VLSHVAVGGFWS-H---CG---WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 326 -~~~pq~~---lL~~~~~~~~I~-H---gG---~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
+|+|..+ +|..+|+ +|+ + -| -.++.|++++|+|+|+... ......+++. +.|..++ +.+
T Consensus 300 ~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~~-~~G~lv~---d~~ 369 (415)
T cd03816 300 TPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKHG-ENGLVFG---DSE 369 (415)
T ss_pred cCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcCC-CCEEEEC---CHH
Confidence 6888665 6888998 663 1 12 3479999999999998643 3566777784 7888773 789
Q ss_pred HHHHHHHHHhcC
Q 013342 395 VVEKAVRRLMVG 406 (445)
Q Consensus 395 ~l~~ai~~ll~~ 406 (445)
+|+++|.++++|
T Consensus 370 ~la~~i~~ll~~ 381 (415)
T cd03816 370 ELAEQLIDLLSN 381 (415)
T ss_pred HHHHHHHHHHhc
Confidence 999999999998
No 54
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.17 E-value=2.8e-08 Score=98.19 Aligned_cols=323 Identities=13% Similarity=0.116 Sum_probs=163.0
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC---CCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcchHHHHHH
Q 013342 9 QGHMTPMLQLGTILYSNGFSITVVHTHFNPPN---PSNHPEFNFQSIPDGLTADDVSTGINILITNLLNVNCQAPFFECM 85 (445)
Q Consensus 9 ~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (445)
.|--.-...||++|+++||+|+++++...... .....++.++.++...-... ... .+.. .+.... ...+
T Consensus 20 GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~-~~~~--~~~~~~----~~~~ 91 (405)
T TIGR03449 20 GGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGL-DKE-DLPT--QLCAFT----GGVL 91 (405)
T ss_pred CCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCCcccC-CHH-HHHH--HHHHHH----HHHH
Confidence 45667789999999999999999997532211 11235777777753211110 000 1111 111111 1223
Q ss_pred HHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCCCCCcCC
Q 013342 86 VRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNKLQDPV 163 (445)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 163 (445)
..+..... . ++|+|-+.... ..+..+++.+++|+|.......... ..+...
T Consensus 92 ~~~~~~~~-----~-~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~~~~-----------~~~~~~---------- 144 (405)
T TIGR03449 92 RAEARHEP-----G-YYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAAVK-----------NAALAD---------- 144 (405)
T ss_pred HHHhhccC-----C-CCCeEEechHHHHHHHHHHHHhcCCCEEEeccchHHHH-----------HHhccC----------
Confidence 22222111 2 79999766533 3455667788999887443221100 000000
Q ss_pred CCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccC---CCceeeccCCCCCCCCCC
Q 013342 164 PGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ---VPIFPIGPFHKFAPFSTS 240 (445)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~---~~~~~vGp~~~~~~~~~~ 240 (445)
. ..+. . ..... .....+..++.++.++....+. +...++ .++..|..-......
T Consensus 145 -------~-~~~~---~---~~~~~-~e~~~~~~~d~vi~~s~~~~~~-----~~~~~~~~~~ki~vi~ngvd~~~~--- 201 (405)
T TIGR03449 145 -------G-DTPE---P---EARRI-GEQQLVDNADRLIANTDEEARD-----LVRHYDADPDRIDVVAPGADLERF--- 201 (405)
T ss_pred -------C-CCCc---h---HHHHH-HHHHHHHhcCeEEECCHHHHHH-----HHHHcCCChhhEEEECCCcCHHHc---
Confidence 0 0000 0 00000 0012346678888887654332 122222 234444322211110
Q ss_pred CCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC----CC-CEEEE-ECCCCCCCCCccCCchHHH
Q 013342 241 CNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS----KQ-PFLWV-IRPSSNNAPEGIDLLPEVL 314 (445)
Q Consensus 241 ~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~-~~v~~-~~~~~~~~~~~~~~~~~~~ 314 (445)
. ........+-+. ..++..+++..|++.. .+....++++++++ +. ++.+. ++.....+. ...+.+
T Consensus 202 -~-~~~~~~~~~~~~-~~~~~~~i~~~G~l~~--~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~----~~~~~l 272 (405)
T TIGR03449 202 -R-PGDRATERARLG-LPLDTKVVAFVGRIQP--LKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGL----ATPDAL 272 (405)
T ss_pred -C-CCcHHHHHHhcC-CCCCCcEEEEecCCCc--ccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcc----hHHHHH
Confidence 0 001111112122 1234466788887753 33345555555432 21 23333 322110110 111222
Q ss_pred H---HH--hcCCcEEEEeccHHH---HhhccccCceee---ccCc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhhe
Q 013342 315 A---EA--VQENGCIVKWAPQKE---VLSHVAVGGFWS---HCGW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWR 382 (445)
Q Consensus 315 ~---~~--~~~n~~~~~~~pq~~---lL~~~~~~~~I~---HgG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G 382 (445)
. +. ..+++.+.+++|+.+ +|..+++ +|. +-|. .++.||+++|+|+|+.... .....+.+. +
T Consensus 273 ~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i~~~-~ 345 (405)
T TIGR03449 273 IELAAELGIADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAVADG-E 345 (405)
T ss_pred HHHHHHcCCCceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhhccC-C
Confidence 1 11 236788899998754 7889998 663 2233 4899999999999987543 455566773 7
Q ss_pred eeeEeCcccCHHHHHHHHHHHhcC
Q 013342 383 TGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 383 ~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.|..++. -+.++++++|.++++|
T Consensus 346 ~g~~~~~-~d~~~la~~i~~~l~~ 368 (405)
T TIGR03449 346 TGLLVDG-HDPADWADALARLLDD 368 (405)
T ss_pred ceEECCC-CCHHHHHHHHHHHHhC
Confidence 7877764 5789999999999998
No 55
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.15 E-value=1.6e-07 Score=90.22 Aligned_cols=313 Identities=12% Similarity=0.060 Sum_probs=163.5
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcchH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVSTGINILITNLLNVNCQAP 80 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (445)
|++++....|+......++++|.++||+|++++............++.+..++...... . ....+. .. ..
T Consensus 2 Il~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~--~~-----~~ 71 (359)
T cd03808 2 ILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIPLDRRGI--N-PFKDLK--AL-----LR 71 (359)
T ss_pred eeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccccCCceEEecccccccc--C-hHhHHH--HH-----HH
Confidence 46666667889999999999999999999999986444322234567777766332100 0 111111 11 11
Q ss_pred HHHHHHHHHhhccCCCCCCCCceEEEEcCCCC--chHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCCC
Q 013342 81 FFECMVRMMEQQQQHPAGDDQIACIIYDEIFY--FPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNK 158 (445)
Q Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 158 (445)
+...++.. +||+|++..... .+..++...+.|.+.......... .. .
T Consensus 72 ~~~~~~~~------------~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------------~~-~--- 120 (359)
T cd03808 72 LYRLLRKE------------RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFV---------------FT-S--- 120 (359)
T ss_pred HHHHHHhc------------CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchh---------------hc-c---
Confidence 12223322 899999875442 233445545666555332111000 00 0
Q ss_pred CCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccC---CCceeeccCCCCC
Q 013342 159 LQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ---VPIFPIGPFHKFA 235 (445)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~---~~~~~vGp~~~~~ 235 (445)
. ........... ......++.++..+....+. +..... .....+.|...+.
T Consensus 121 ------~--------------~~~~~~~~~~~-~~~~~~~d~ii~~s~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 174 (359)
T cd03808 121 ------G--------------GLKRRLYLLLE-RLALRFTDKVIFQNEDDRDL-----ALKLGIIKKKKTVLIPGSGVDL 174 (359)
T ss_pred ------c--------------hhHHHHHHHHH-HHHHhhccEEEEcCHHHHHH-----HHHhcCCCcCceEEecCCCCCh
Confidence 0 00001111111 12234568888877644432 233221 1222232222221
Q ss_pred CCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC---CCCEE-EEECCCCCCCCCccCCch
Q 013342 236 PFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFL-WVIRPSSNNAPEGIDLLP 311 (445)
Q Consensus 236 ~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v-~~~~~~~~~~~~~~~~~~ 311 (445)
.. .... ... ..+++.+++..|++.. .+....++++++.+ +.++- ++++.+. .. ....
T Consensus 175 ~~------~~~~---~~~---~~~~~~~i~~~G~~~~--~k~~~~li~~~~~l~~~~~~~~l~i~G~~~-~~----~~~~ 235 (359)
T cd03808 175 DR------FSPS---PEP---IPEDDPVFLFVARLLK--DKGIDELLEAARILKAKGPNVRLLLVGDGD-EE----NPAA 235 (359)
T ss_pred hh------cCcc---ccc---cCCCCcEEEEEecccc--ccCHHHHHHHHHHHHhcCCCeEEEEEcCCC-cc----hhhH
Confidence 11 0000 000 1344578888888754 33344555555443 23332 3333221 10 0000
Q ss_pred HH-HHH-HhcCCcEEEEeccH-HHHhhccccCceeeccC----chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheee
Q 013342 312 EV-LAE-AVQENGCIVKWAPQ-KEVLSHVAVGGFWSHCG----WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTG 384 (445)
Q Consensus 312 ~~-~~~-~~~~n~~~~~~~pq-~~lL~~~~~~~~I~HgG----~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g 384 (445)
.. ..+ ...+++.+.++..+ ..++..+++ +|.-+. .+++.||+.+|+|+|+.... .+...+++. +.|
T Consensus 236 ~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~~i~~~-~~g 308 (359)
T cd03808 236 ILEIEKLGLEGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCREAVIDG-VNG 308 (359)
T ss_pred HHHHHhcCCcceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----CchhhhhcC-cce
Confidence 00 111 12356777777544 558999998 775443 57899999999999986544 345666763 778
Q ss_pred eEeCcccCHHHHHHHHHHHhcCC
Q 013342 385 LELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 385 ~~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
...+. -+++++.++|.+++.|+
T Consensus 309 ~~~~~-~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 309 FLVPP-GDAEALADAIERLIEDP 330 (359)
T ss_pred EEECC-CCHHHHHHHHHHHHhCH
Confidence 77764 47899999999999983
No 56
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.15 E-value=6.2e-08 Score=94.38 Aligned_cols=131 Identities=16% Similarity=0.166 Sum_probs=82.0
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhC----CCCEEEEECCCCCCCCCccCCchHHHHH-HhcCCcEEEEeccH-HHH
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNS----KQPFLWVIRPSSNNAPEGIDLLPEVLAE-AVQENGCIVKWAPQ-KEV 333 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~n~~~~~~~pq-~~l 333 (445)
+..+++.+|... ..+.+..++++++.. +.++++.- .+. + ...+-+-..+ ...+++.+.++.++ ..+
T Consensus 196 ~~~~il~~g~l~--~~K~~~~li~a~~~l~~~~~~~l~i~G-~g~----~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 267 (371)
T cd04962 196 GEKVLIHISNFR--PVKRIDDVIRIFAKVRKEVPARLLLVG-DGP----E-RSPAERLARELGLQDDVLFLGKQDHVEEL 267 (371)
T ss_pred CCeEEEEecccc--cccCHHHHHHHHHHHHhcCCceEEEEc-CCc----C-HHHHHHHHHHcCCCceEEEecCcccHHHH
Confidence 446677788765 344555555555432 34444442 221 0 1111111111 12467888888775 558
Q ss_pred hhccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 334 LSHVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 334 L~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
|..+++ +|.- |.-.++.||+.+|+|+|+... ...+..+++. ..|...+. -+.+++.++|.++++|
T Consensus 268 ~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i~~~-~~G~~~~~-~~~~~l~~~i~~l~~~ 336 (371)
T cd04962 268 LSIADL--FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVVKHG-ETGFLVDV-GDVEAMAEYALSLLED 336 (371)
T ss_pred HHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhhcCC-CceEEcCC-CCHHHHHHHHHHHHhC
Confidence 999998 6632 234599999999999998644 4566677773 67776664 5789999999999998
No 57
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.08 E-value=6.2e-07 Score=88.85 Aligned_cols=144 Identities=15% Similarity=0.105 Sum_probs=84.1
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCC--CCEEEEECCCCCCCCCccCCchHHHHHH----hcCCcEEEEeccHHH
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSK--QPFLWVIRPSSNNAPEGIDLLPEVLAEA----VQENGCIVKWAPQKE 332 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~n~~~~~~~pq~~ 332 (445)
+++.+++..|++. ..+.+..++++++.+. .++-+.+-++ +...+.+.+. .-+|+.+.+|+|+.+
T Consensus 227 ~~~~~i~~~G~l~--~~kg~~~li~a~~~l~~~~~~~l~ivG~--------g~~~~~l~~~~~~~~l~~v~f~G~~~~~~ 296 (412)
T PRK10307 227 DGKKIVLYSGNIG--EKQGLELVIDAARRLRDRPDLIFVICGQ--------GGGKARLEKMAQCRGLPNVHFLPLQPYDR 296 (412)
T ss_pred CCCEEEEEcCccc--cccCHHHHHHHHHHhccCCCeEEEEECC--------ChhHHHHHHHHHHcCCCceEEeCCCCHHH
Confidence 3446667778775 4445666777776542 1233333221 1112222211 125788899998765
Q ss_pred ---HhhccccCceeeccCc------hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHH
Q 013342 333 ---VLSHVAVGGFWSHCGW------NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRL 403 (445)
Q Consensus 333 ---lL~~~~~~~~I~HgG~------gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~l 403 (445)
++..+|+..+.+..+. +.+.|++.+|+|+|+....+.. ....++ +.|+.++. -+.++++++|.++
T Consensus 297 ~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~---~~G~~~~~-~d~~~la~~i~~l 370 (412)
T PRK10307 297 LPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE---GIGVCVEP-ESVEALVAAIAAL 370 (412)
T ss_pred HHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh---CCcEEeCC-CCHHHHHHHHHHH
Confidence 7888898444444332 2368999999999998654321 112222 45666654 5789999999999
Q ss_pred hcCCc-HHHHHHHHHH
Q 013342 404 MVGEE-GEEMRQRAKN 418 (445)
Q Consensus 404 l~~~~-~~~~~~~a~~ 418 (445)
++|++ ...+.+++++
T Consensus 371 ~~~~~~~~~~~~~a~~ 386 (412)
T PRK10307 371 ARQALLRPKLGTVARE 386 (412)
T ss_pred HhCHHHHHHHHHHHHH
Confidence 98832 2334444444
No 58
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.08 E-value=4.8e-07 Score=87.24 Aligned_cols=184 Identities=17% Similarity=0.153 Sum_probs=105.9
Q ss_pred hccCCcEEEEcchhhhcHHHHHHHHhc--cCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccc
Q 013342 194 KIRTSSAVIWNTMHYLEESSLAQLQQQ--CQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVA 271 (445)
Q Consensus 194 ~~~~~~~~l~n~~~~le~~~~~~~~~~--~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~ 271 (445)
.+..++.++..+...-+. ++.. ...++..++........ ...... .. +-+. ...+..+++..|+..
T Consensus 145 ~~~~~d~ii~~s~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~-~~-~~~~-~~~~~~~i~~~g~~~ 212 (377)
T cd03798 145 ALRRADAVIAVSEALADE-----LKALGIDPEKVTVIPNGVDTERF----SPADRA-EA-RKLG-LPEDKKVILFVGRLV 212 (377)
T ss_pred HHhcCCeEEeCCHHHHHH-----HHHhcCCCCceEEcCCCcCcccC----CCcchH-HH-Hhcc-CCCCceEEEEeccCc
Confidence 346678888877644332 2332 22456666654432211 000000 00 0011 123456778888776
Q ss_pred cCChhhHHHHHHHHHhCC---CCEEEEECCCCCCCCCccCCchHHHHH-----HhcCCcEEEEeccHHH---HhhccccC
Q 013342 272 SMDKKEPEEMAWGLVNSK---QPFLWVIRPSSNNAPEGIDLLPEVLAE-----AVQENGCIVKWAPQKE---VLSHVAVG 340 (445)
Q Consensus 272 ~~~~~~~~~~~~al~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~~pq~~---lL~~~~~~ 340 (445)
. .+....++++++... .++.+.+.+.. ...+.+.+ ...+|+.+.+++++.+ ++..+++
T Consensus 213 ~--~k~~~~li~~~~~~~~~~~~~~l~i~g~~--------~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~- 281 (377)
T cd03798 213 P--RKGIDYLIEALARLLKKRPDVHLVIVGDG--------PLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADV- 281 (377)
T ss_pred c--ccCHHHHHHHHHHHHhcCCCeEEEEEcCC--------cchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCe-
Confidence 4 334455555554432 24444442221 01111211 1347888899999754 7888888
Q ss_pred ceee----ccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCC
Q 013342 341 GFWS----HCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 341 ~~I~----HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
+|. -|..+++.||+++|+|+|+-+.. .....+++ .+.|...+. -+.+++.+++.++++|.
T Consensus 282 -~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~-~~~g~~~~~-~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 282 -FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITD-GENGLLVPP-GDPEALAEAILRLLADP 345 (377)
T ss_pred -eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcC-CcceeEECC-CCHHHHHHHHHHHhcCc
Confidence 663 24567899999999999986543 45566777 377777764 58899999999999983
No 59
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.98 E-value=1.1e-06 Score=87.48 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=74.3
Q ss_pred CcEEEEeccH-HHHhhccccCceeec-----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 321 NGCIVKWAPQ-KEVLSHVAVGGFWSH-----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 321 n~~~~~~~pq-~~lL~~~~~~~~I~H-----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
++++.+...+ ..++..+|+ ++.. +|-.+++|++++|+|+|+-|...++......+.+. |.++.. -+++
T Consensus 303 ~v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~---~d~~ 376 (425)
T PRK05749 303 DVLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQV---EDAE 376 (425)
T ss_pred cEEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEE---CCHH
Confidence 3444454433 458888887 4432 23346999999999999999988888888888774 877664 3679
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 395 VVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 395 ~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
+|+++|.++++| + +.+++|++..++.+....+..+.+.+++.+
T Consensus 377 ~La~~l~~ll~~---~---~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~ 419 (425)
T PRK05749 377 DLAKAVTYLLTD---P---DARQAYGEAGVAFLKQNQGALQRTLQLLEP 419 (425)
T ss_pred HHHHHHHHHhcC---H---HHHHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 999999999998 3 333445555555444444444444444443
No 60
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.97 E-value=1.1e-06 Score=83.80 Aligned_cols=88 Identities=23% Similarity=0.305 Sum_probs=61.3
Q ss_pred CCcEEEEecc-HHHHhhccccCceeeccC----chhHHHHHhhCCCcccCCcccchhhhHHHHHhhhe-eeeEeCcccCH
Q 013342 320 ENGCIVKWAP-QKEVLSHVAVGGFWSHCG----WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWR-TGLELENELER 393 (445)
Q Consensus 320 ~n~~~~~~~p-q~~lL~~~~~~~~I~HgG----~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~t~ 393 (445)
+++.+.++.. -..++..+++ +|.-.. -+++.||+++|+|+|+.+..+.+. .+... | .|...+. -+.
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~-~~~g~~~~~-~~~ 306 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIED-GVNGLLVPN-GDV 306 (348)
T ss_pred CeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhcc-CcceEEeCC-CCH
Confidence 5566666633 3558889998 776542 468999999999999875544332 33342 4 7877764 577
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHH
Q 013342 394 EVVEKAVRRLMVGEEGEEMRQRAKN 418 (445)
Q Consensus 394 ~~l~~ai~~ll~~~~~~~~~~~a~~ 418 (445)
++++++|.++++| +..+++..+
T Consensus 307 ~~~~~~i~~ll~~---~~~~~~~~~ 328 (348)
T cd03820 307 EALAEALLRLMED---EELRKRMGA 328 (348)
T ss_pred HHHHHHHHHHHcC---HHHHHHHHH
Confidence 9999999999999 554444433
No 61
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.97 E-value=5.1e-07 Score=87.77 Aligned_cols=80 Identities=19% Similarity=0.189 Sum_probs=63.3
Q ss_pred cCCcEEEEeccHHH---HhhccccCceeecc----------CchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeee
Q 013342 319 QENGCIVKWAPQKE---VLSHVAVGGFWSHC----------GWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGL 385 (445)
Q Consensus 319 ~~n~~~~~~~pq~~---lL~~~~~~~~I~Hg----------G~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~ 385 (445)
.+++.+.+++|+++ ++..+++ +|.-+ -.+++.||+++|+|+|+-+.. .++..+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----CchhheecC-CeeE
Confidence 57788889998765 5888898 66422 356899999999999987664 366677774 8888
Q ss_pred EeCcccCHHHHHHHHHHHhcC
Q 013342 386 ELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 386 ~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.++. -+.+++.++|.++++|
T Consensus 317 ~~~~-~d~~~l~~~i~~l~~~ 336 (367)
T cd05844 317 LVPE-GDVAALAAALGRLLAD 336 (367)
T ss_pred EECC-CCHHHHHHHHHHHHcC
Confidence 7764 5789999999999998
No 62
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.96 E-value=2.4e-06 Score=85.34 Aligned_cols=161 Identities=11% Similarity=0.110 Sum_probs=95.0
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCchH-------HH---HHH--hcCCcE
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLLPE-------VL---AEA--VQENGC 323 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~-------~~---~~~--~~~n~~ 323 (445)
..++++.|.+. ..+....+++|++.+ ..+++++.+.+.. ...+.. .+ .+. ..+++.
T Consensus 248 ~~~i~~vGrl~--~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~-----~~~l~~~~~~~~~~~~~~~~~~~l~~~V~ 320 (439)
T TIGR02472 248 KPPILAISRPD--RRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDD-----IRKMESQQREVLQKVLLLIDRYDLYGKVA 320 (439)
T ss_pred CcEEEEEcCCc--ccCCHHHHHHHHHhChhhhhhccEEEEeCCccc-----cccccHHHHHHHHHHHHHHHHcCCCceEE
Confidence 35667778764 445677788887642 1244444433211 011110 11 111 346777
Q ss_pred EEEeccHHH---Hhhcc----ccCceeecc---C-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccC
Q 013342 324 IVKWAPQKE---VLSHV----AVGGFWSHC---G-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELE 392 (445)
Q Consensus 324 ~~~~~pq~~---lL~~~----~~~~~I~Hg---G-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t 392 (445)
+.+++++.+ ++..+ |+ +|... | -.+++||+++|+|+|+... ..+...+.+. ..|..++. -+
T Consensus 321 f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~----gg~~eiv~~~-~~G~lv~~-~d 392 (439)
T TIGR02472 321 YPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDD----GGPRDIIANC-RNGLLVDV-LD 392 (439)
T ss_pred ecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCC----CCcHHHhcCC-CcEEEeCC-CC
Confidence 888888766 46655 66 77643 4 3499999999999998854 3455666663 67877765 57
Q ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 393 REVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 393 ~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
+++++++|.++++| +.. .++|++..++.+...=+-++.++++.+
T Consensus 393 ~~~la~~i~~ll~~---~~~---~~~~~~~a~~~~~~~fsw~~~~~~~~~ 436 (439)
T TIGR02472 393 LEAIASALEDALSD---SSQ---WQLWSRNGIEGVRRHYSWDAHVEKYLR 436 (439)
T ss_pred HHHHHHHHHHHHhC---HHH---HHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999999998 433 233444443332222344455555443
No 63
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.96 E-value=9.6e-07 Score=85.30 Aligned_cols=131 Identities=18% Similarity=0.161 Sum_probs=85.9
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCC-CCEEEEECCCCCCCCCccCCchHHHHH-----HhcCCcEEEEeccHHH-
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSK-QPFLWVIRPSSNNAPEGIDLLPEVLAE-----AVQENGCIVKWAPQKE- 332 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~~pq~~- 332 (445)
+..+++..|++. ..+....+++++++.. .++++.- .+ .....+.+ ...+|+.+.+|+|+.+
T Consensus 190 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G-~g---------~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~ 257 (357)
T cd03795 190 GRPFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVG-EG---------PLEAELEALAAALGLLDRVRFLGRLDDEEK 257 (357)
T ss_pred CCcEEEEecccc--cccCHHHHHHHHHhccCcEEEEEe-CC---------hhHHHHHHHHHhcCCcceEEEcCCCCHHHH
Confidence 346678888765 4456777888888877 3443332 11 11122221 2347899999999854
Q ss_pred --HhhccccCceee---ccCch-hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 333 --VLSHVAVGGFWS---HCGWN-STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 333 --lL~~~~~~~~I~---HgG~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
++..+++..+-+ +-|.| ++.||+++|+|+|+....+....+-. +. +.|...+. -+.++++++|.++++|
T Consensus 258 ~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~~-~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 258 AALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVPP-GDPAALAEAIRRLLED 332 (357)
T ss_pred HHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeCC-CCHHHHHHHHHHHHHC
Confidence 777888822223 23444 79999999999999765555443333 33 67766654 5789999999999998
Q ss_pred C
Q 013342 407 E 407 (445)
Q Consensus 407 ~ 407 (445)
+
T Consensus 333 ~ 333 (357)
T cd03795 333 P 333 (357)
T ss_pred H
Confidence 3
No 64
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.95 E-value=2.6e-08 Score=96.92 Aligned_cols=135 Identities=17% Similarity=0.157 Sum_probs=88.1
Q ss_pred CCCceEEEEecccccC-ChhhHHHHHHHHHhCCCC-EEEEECCCCCCCCCccCCchHHHHHHh--cCCcEEEEeccHH--
Q 013342 258 APESVIYVSLGSVASM-DKKEPEEMAWGLVNSKQP-FLWVIRPSSNNAPEGIDLLPEVLAEAV--QENGCIVKWAPQK-- 331 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~pq~-- 331 (445)
++++.+++++|..... ..+.+..+++++++...+ +.+++.++.. + ...+.+...+.. .+++.+.+..++.
T Consensus 196 ~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~-~---~~~l~~~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 196 LPKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR-T---RPRIREAGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC-h---HHHHHHHHHhhccCCCCEEEECCcCHHHH
Confidence 3456788888876542 356678888888776432 5444432210 0 011212111111 4677777665544
Q ss_pred -HHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 332 -EVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 332 -~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.++..+++ +|+-+| |.+.|++++|+|+|+++.. |. +..+.+. |+++.+.. +.++|.++|.++++|
T Consensus 272 ~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~~--~~~~i~~~i~~ll~~ 337 (363)
T cd03786 272 LLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVGT--DPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecCC--CHHHHHHHHHHHhcC
Confidence 46778998 999999 8888999999999998743 22 4355563 88776642 589999999999998
No 65
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.93 E-value=3.1e-06 Score=83.49 Aligned_cols=78 Identities=14% Similarity=0.152 Sum_probs=56.7
Q ss_pred cCCcEEEEeccHHH---HhhccccCceeec---cCch-hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCccc
Q 013342 319 QENGCIVKWAPQKE---VLSHVAVGGFWSH---CGWN-STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENEL 391 (445)
Q Consensus 319 ~~n~~~~~~~pq~~---lL~~~~~~~~I~H---gG~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~ 391 (445)
.+++.+.+|+|+.+ +|..+|+ +|.- -|.| ++.||+++|+|+|+....+ ....+.+ |.+.... .
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~~~--~ 318 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILLAE--P 318 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--CceeecC--C
Confidence 46688899998755 7888888 6642 2444 9999999999999977653 3344444 4343333 3
Q ss_pred CHHHHHHHHHHHhcC
Q 013342 392 EREVVEKAVRRLMVG 406 (445)
Q Consensus 392 t~~~l~~ai~~ll~~ 406 (445)
+.+++++++.+++++
T Consensus 319 ~~~~l~~~l~~~l~~ 333 (398)
T cd03796 319 DVESIVRKLEEAISI 333 (398)
T ss_pred CHHHHHHHHHHHHhC
Confidence 789999999999986
No 66
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.92 E-value=9.2e-07 Score=85.48 Aligned_cols=79 Identities=16% Similarity=0.181 Sum_probs=57.1
Q ss_pred cCCcEEEEeccH-HHHhhccccCceeecc----C-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccC
Q 013342 319 QENGCIVKWAPQ-KEVLSHVAVGGFWSHC----G-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELE 392 (445)
Q Consensus 319 ~~n~~~~~~~pq-~~lL~~~~~~~~I~Hg----G-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t 392 (445)
.+++.+.+|.+. ..+|..+++ +|+-. | -++++||+++|+|+|+.-. ......+.+. +.|..++. -+
T Consensus 245 ~~~v~~~g~~~~~~~~l~~ad~--~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-~~ 316 (355)
T cd03819 245 QDRVTFVGHCSDMPAAYALADI--VVSASTEPEAFGRTAVEAQAMGRPVIASDH----GGARETVRPG-ETGLLVPP-GD 316 (355)
T ss_pred cceEEEcCCcccHHHHHHhCCE--EEecCCCCCCCchHHHHHHhcCCCEEEcCC----CCcHHHHhCC-CceEEeCC-CC
Confidence 467888888543 458888998 55322 3 3599999999999998643 3445566663 67877764 58
Q ss_pred HHHHHHHHHHHhc
Q 013342 393 REVVEKAVRRLMV 405 (445)
Q Consensus 393 ~~~l~~ai~~ll~ 405 (445)
.+++.++|.+++.
T Consensus 317 ~~~l~~~i~~~~~ 329 (355)
T cd03819 317 AEALAQALDQILS 329 (355)
T ss_pred HHHHHHHHHHHHh
Confidence 8999999976664
No 67
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.91 E-value=4.7e-06 Score=80.49 Aligned_cols=132 Identities=15% Similarity=0.193 Sum_probs=78.9
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCC---CCEEEEE-CCCCCCCCCccCCchHHHHH--HhcCCcEEEEeccHHH
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSK---QPFLWVI-RPSSNNAPEGIDLLPEVLAE--AVQENGCIVKWAPQKE 332 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~---~~~v~~~-~~~~~~~~~~~~~~~~~~~~--~~~~n~~~~~~~pq~~ 332 (445)
++..+++..|+... .+....+++++.++. .++-+.+ +.+.. . ....-+...+ ...+++.+.+|+++.+
T Consensus 201 ~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~-~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 274 (375)
T cd03821 201 PDKRIILFLGRLHP--KKGLDLLIEAFAKLAERFPDWHLVIAGPDEG-G---YRAELKQIAAALGLEDRVTFTGMLYGED 274 (375)
T ss_pred CCCcEEEEEeCcch--hcCHHHHHHHHHHhhhhcCCeEEEEECCCCc-c---hHHHHHHHHHhcCccceEEEcCCCChHH
Confidence 34566788887753 334555566665432 2333333 22210 0 0000111101 1347788899999655
Q ss_pred ---HhhccccCceeeccC----chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhc
Q 013342 333 ---VLSHVAVGGFWSHCG----WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMV 405 (445)
Q Consensus 333 ---lL~~~~~~~~I~HgG----~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~ 405 (445)
++..+++ +|.-.- ..++.||+++|+|+|+.+.. .....+.. +.|...+. +.+++.++|.++++
T Consensus 275 ~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~~~--~~~~~~~~--~~~~~~~~i~~l~~ 344 (375)
T cd03821 275 KAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELIEY--GCGWVVDD--DVDALAAALRRALE 344 (375)
T ss_pred HHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHhhc--CceEEeCC--ChHHHHHHHHHHHh
Confidence 6888888 654322 46899999999999997543 33444443 66666654 45999999999999
Q ss_pred C
Q 013342 406 G 406 (445)
Q Consensus 406 ~ 406 (445)
|
T Consensus 345 ~ 345 (375)
T cd03821 345 L 345 (375)
T ss_pred C
Confidence 8
No 68
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.89 E-value=8.2e-06 Score=86.92 Aligned_cols=145 Identities=12% Similarity=0.192 Sum_probs=87.2
Q ss_pred hhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCC-----CCEEEEECCCCCCCCCcc---CCchHHH---HH-
Q 013342 249 SCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSK-----QPFLWVIRPSSNNAPEGI---DLLPEVL---AE- 316 (445)
Q Consensus 249 ~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~v~~~~~~~~~~~~~~---~~~~~~~---~~- 316 (445)
++..|+. .+++ .++++.|.+. ..+....+++|+..+. ..+.++++.+.... +.. +..-..+ .+
T Consensus 469 ~l~r~~~-~pdk-pvIL~VGRL~--p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d-~l~~~~~~~l~~L~~li~~ 543 (1050)
T TIGR02468 469 EIMRFFT-NPRK-PMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDID-EMSSGSSSVLTSVLKLIDK 543 (1050)
T ss_pred HHHhhcc-cCCC-cEEEEEcCCc--cccCHHHHHHHHHHhHhhccCCCEEEEEecCchhh-hhhccchHHHHHHHHHHHH
Confidence 3455654 2444 4556677665 4455677788876542 24444444321000 000 0000111 11
Q ss_pred -HhcCCcEEEEeccHHH---Hhhcc----ccCceeec---cCc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheee
Q 013342 317 -AVQENGCIVKWAPQKE---VLSHV----AVGGFWSH---CGW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTG 384 (445)
Q Consensus 317 -~~~~n~~~~~~~pq~~---lL~~~----~~~~~I~H---gG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g 384 (445)
.+.+++.+.+++++.+ ++..+ ++ ||.- =|+ .+++||+++|+|+|+-...+ ....++.. ..|
T Consensus 544 lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DV--FV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g-~nG 616 (1050)
T TIGR02468 544 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVL-DNG 616 (1050)
T ss_pred hCCCCeEEecCCCCHHHHHHHHHHhhhcCCe--eeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccC-CcE
Confidence 1346788889988866 56555 35 7764 243 48999999999999986543 44555663 678
Q ss_pred eEeCcccCHHHHHHHHHHHhcC
Q 013342 385 LELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 385 ~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
+.+++ -++++|+++|.++++|
T Consensus 617 lLVdP-~D~eaLA~AL~~LL~D 637 (1050)
T TIGR02468 617 LLVDP-HDQQAIADALLKLVAD 637 (1050)
T ss_pred EEECC-CCHHHHHHHHHHHhhC
Confidence 77775 5789999999999998
No 69
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.87 E-value=1.7e-07 Score=83.33 Aligned_cols=142 Identities=16% Similarity=0.122 Sum_probs=102.7
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhc--CCcEEEEecc-HHHHhhc
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ--ENGCIVKWAP-QKEVLSH 336 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~n~~~~~~~p-q~~lL~~ 336 (445)
+.-|+|++|... .....-.++..+.+.++.+-+++++. .+-.+++..+.. +|+.+..... ...+|..
T Consensus 158 ~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~--------~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke 227 (318)
T COG3980 158 KRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSS--------NPTLKNLRKRAEKYPNINLYIDTNDMAELMKE 227 (318)
T ss_pred hheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCC--------CcchhHHHHHHhhCCCeeeEecchhHHHHHHh
Confidence 445899999542 33355668888887775555555422 223344444333 6666665554 4569999
Q ss_pred cccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHH
Q 013342 337 VAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEGEEMRQRA 416 (445)
Q Consensus 337 ~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a 416 (445)
|++ .|+-+| .|+.|++.-|+|.+++|+...|---|...+. +|+-..+.-.++++....-+.++.+| ..-+++.
T Consensus 228 ~d~--aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~~l~~~~~~~~~~~i~~d---~~~rk~l 300 (318)
T COG3980 228 ADL--AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGYHLKDLAKDYEILQIQKD---YARRKNL 300 (318)
T ss_pred cch--heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccCCCchHHHHHHHHHhhhC---HHHhhhh
Confidence 998 998776 5899999999999999999999999999999 69988886567778888888889998 4455544
Q ss_pred HH
Q 013342 417 KN 418 (445)
Q Consensus 417 ~~ 418 (445)
-.
T Consensus 301 ~~ 302 (318)
T COG3980 301 SF 302 (318)
T ss_pred hh
Confidence 33
No 70
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.86 E-value=4e-06 Score=81.02 Aligned_cols=108 Identities=20% Similarity=0.226 Sum_probs=70.7
Q ss_pred cCCcEEEE-eccHH---HHhhccccCceeec------cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeC
Q 013342 319 QENGCIVK-WAPQK---EVLSHVAVGGFWSH------CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELE 388 (445)
Q Consensus 319 ~~n~~~~~-~~pq~---~lL~~~~~~~~I~H------gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 388 (445)
.+++.+.+ |+|+. .++..+++ +|.- |..++++||+++|+|+|+.+..+ ...+... +.|...+
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEc
Confidence 46777774 48865 48888888 6632 33568999999999999987654 3445563 7777776
Q ss_pred cccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 389 NELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 389 ~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
. -+.+++.+++.++++| +..++ ++++..++.+.. =+.++.++++.+
T Consensus 318 ~-~d~~~~~~~l~~l~~~---~~~~~---~~~~~~~~~~~~-~s~~~~~~~~~~ 363 (366)
T cd03822 318 P-GDPAALAEAIRRLLAD---PELAQ---ALRARAREYARA-MSWERVAERYLR 363 (366)
T ss_pred C-CCHHHHHHHHHHHHcC---hHHHH---HHHHHHHHHHhh-CCHHHHHHHHHH
Confidence 4 4689999999999998 32222 233333333222 355556665554
No 71
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.86 E-value=4.2e-06 Score=82.23 Aligned_cols=80 Identities=18% Similarity=0.108 Sum_probs=60.4
Q ss_pred cCCcEEEEeccHHH---HhhccccCceeecc---C-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCccc
Q 013342 319 QENGCIVKWAPQKE---VLSHVAVGGFWSHC---G-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENEL 391 (445)
Q Consensus 319 ~~n~~~~~~~pq~~---lL~~~~~~~~I~Hg---G-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~ 391 (445)
.+++.+.+++|+.+ +|..+++ ++... | -.++.||+++|+|+|+.-.. .....+... +.|...+ .
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~e~i~~~-~~g~~~~--~ 349 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPLETVVDG-ETGFLCE--P 349 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCC----CcHHHhccC-CceEEeC--C
Confidence 47899999999864 7888888 66422 2 25789999999999997443 344556663 6777665 3
Q ss_pred CHHHHHHHHHHHhcCC
Q 013342 392 EREVVEKAVRRLMVGE 407 (445)
Q Consensus 392 t~~~l~~ai~~ll~~~ 407 (445)
+.++++++|.++++|+
T Consensus 350 ~~~~~a~~i~~l~~~~ 365 (392)
T cd03805 350 TPEEFAEAMLKLANDP 365 (392)
T ss_pred CHHHHHHHHHHHHhCh
Confidence 7899999999999983
No 72
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.82 E-value=8.2e-07 Score=83.89 Aligned_cols=291 Identities=16% Similarity=0.118 Sum_probs=153.2
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCCCCCCCCCCCCh-hHHHHHHHHHhcchHHHHHHHH
Q 013342 10 GHMTPMLQLGTILYSNGFSITVVHTHFNPPN-PSNHPEFNFQSIPDGLTADDVSTGI-NILITNLLNVNCQAPFFECMVR 87 (445)
Q Consensus 10 GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 87 (445)
-|+..+-.+.++|.++||+|.+.+-+..... ..+.-|+++..+...- . +. ..+. ..... . .++++.
T Consensus 11 ~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~y~~iG~~g-~-----~~~~Kl~--~~~~R-~---~~l~~~ 78 (335)
T PF04007_consen 11 AHVHFFKNIIRELEKRGHEVLITARDKDETEELLDLYGIDYIVIGKHG-D-----SLYGKLL--ESIER-Q---YKLLKL 78 (335)
T ss_pred hHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCCeEEEcCCC-C-----CHHHHHH--HHHHH-H---HHHHHH
Confidence 4999999999999999999999887543322 2244588888887421 1 11 1111 11111 1 123333
Q ss_pred HHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCCCCCcCCCCCC
Q 013342 88 MMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNKLQDPVPGLH 167 (445)
Q Consensus 88 ~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 167 (445)
+.+ . +||++|+- ....+..+|.-+|+|+|.+.=.........+. .|+.+ .-..|..
T Consensus 79 ~~~--------~-~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e~a~~~~~Lt---------~Pla~----~i~~P~~- 134 (335)
T PF04007_consen 79 IKK--------F-KPDVAISF-GSPEAARVAFGLGIPSIVFNDTEHAIAQNRLT---------LPLAD----VIITPEA- 134 (335)
T ss_pred HHh--------h-CCCEEEec-CcHHHHHHHHHhCCCeEEEecCchhhccceee---------hhcCC----eeECCcc-
Confidence 322 1 89999975 45667789999999999976543221111100 11111 0000000
Q ss_pred CCCCCCCCCcccccchHHHHHHHHhhhccCCcEEE-EcchhhhcHHHHHHHHhccCCCceeeccCCCCCCCCCCCCCcCC
Q 013342 168 PLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVI-WNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNE 246 (445)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~ 246 (445)
++. ..++ .+.....+. ++++.++- ++=| +++
T Consensus 135 ------~~~-------~~~~------~~G~~~~i~~y~G~~E~a----------------yl~~-------------F~P 166 (335)
T PF04007_consen 135 ------IPK-------EFLK------RFGAKNQIRTYNGYKELA----------------YLHP-------------FKP 166 (335)
T ss_pred ------cCH-------HHHH------hcCCcCCEEEECCeeeEE----------------eecC-------------CCC
Confidence 000 0000 000001111 33332221 1111 223
Q ss_pred CchhchhhccCCCCceEEEEeccccc----CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCc
Q 013342 247 DTSCISWLNNQAPESVIYVSLGSVAS----MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENG 322 (445)
Q Consensus 247 ~~~l~~wl~~~~~~~~v~vs~Gs~~~----~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 322 (445)
+++..+-+. ..+++.|++-+-+..+ ........+++.+++.+..+|..-+.. ..++-+ +.. ++
T Consensus 167 d~~vl~~lg-~~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~---------~~~~~~-~~~--~~ 233 (335)
T PF04007_consen 167 DPEVLKELG-LDDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE---------DQRELF-EKY--GV 233 (335)
T ss_pred ChhHHHHcC-CCCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc---------chhhHH-hcc--Cc
Confidence 333333343 2356777777766433 333557788999999877644443221 111111 111 13
Q ss_pred EEE-EeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHH
Q 013342 323 CIV-KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVR 401 (445)
Q Consensus 323 ~~~-~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~ 401 (445)
.+. +-+....+|.++++ +|+-|| ....||...|+|.|.+ +.++-...-+.+.+ .|.-.+ ..+++++.+.|.
T Consensus 234 ~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~-~Gll~~---~~~~~ei~~~v~ 305 (335)
T PF04007_consen 234 IIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIE-KGLLYH---STDPDEIVEYVR 305 (335)
T ss_pred cccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHH-CCCeEe---cCCHHHHHHHHH
Confidence 332 55666689999999 998555 8889999999999986 33343334456667 365222 356777777655
Q ss_pred HHhc
Q 013342 402 RLMV 405 (445)
Q Consensus 402 ~ll~ 405 (445)
+.+.
T Consensus 306 ~~~~ 309 (335)
T PF04007_consen 306 KNLG 309 (335)
T ss_pred Hhhh
Confidence 5443
No 73
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.80 E-value=1.2e-05 Score=77.91 Aligned_cols=153 Identities=14% Similarity=0.164 Sum_probs=85.8
Q ss_pred EEEecccccCChhhHHHHHHHHHhCCC--CEEEEECCCCCCCCCccCCchHHHH--HHhcCCcEEEEeccHHH---Hhhc
Q 013342 264 YVSLGSVASMDKKEPEEMAWGLVNSKQ--PFLWVIRPSSNNAPEGIDLLPEVLA--EAVQENGCIVKWAPQKE---VLSH 336 (445)
Q Consensus 264 ~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~n~~~~~~~pq~~---lL~~ 336 (445)
++..|+.. ..+.+..++++++++.. +++ .++.+.. ...+-+.+. ....+++.+.+++|+.+ ++..
T Consensus 196 i~~~G~~~--~~Kg~~~li~a~~~l~~~~~l~-ivG~~~~-----~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 196 YLLVGRIV--PENNIDDLIEAFSKSNSGKKLV-IVGNADH-----NTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRY 267 (363)
T ss_pred EEEEeccc--ccCCHHHHHHHHHhhccCceEE-EEcCCCC-----cchHHHHHHHHhCCCCcEEEccccChHHHHHHHHh
Confidence 45678775 44556677888877653 433 3332210 011112222 12347888999999875 5666
Q ss_pred cccCceeeccCc-----hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcHHH
Q 013342 337 VAVGGFWSHCGW-----NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEGEE 411 (445)
Q Consensus 337 ~~~~~~I~HgG~-----gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~ 411 (445)
+++ ++.+.-. +++.||+.+|+|+|+....+. ...++.. |... +. . +.++++|.++++| +.
T Consensus 268 ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~~-g~~~--~~--~-~~l~~~i~~l~~~---~~ 332 (363)
T cd04955 268 AAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGDK-AIYF--KV--G-DDLASLLEELEAD---PE 332 (363)
T ss_pred CCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecCC-eeEe--cC--c-hHHHHHHHHHHhC---HH
Confidence 777 5554433 479999999999998765432 2223332 3332 22 1 1299999999998 32
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 412 MRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 412 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
.. +++++..++.+...=+.+..++++++
T Consensus 333 ~~---~~~~~~~~~~~~~~fs~~~~~~~~~~ 360 (363)
T cd04955 333 EV---SAMAKAARERIREKYTWEKIADQYEE 360 (363)
T ss_pred HH---HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 22 23333333332222355566666654
No 74
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.78 E-value=2.7e-08 Score=79.54 Aligned_cols=119 Identities=18% Similarity=0.108 Sum_probs=82.5
Q ss_pred ceEEEEecccccC---ChhhHHHHHHHHHhCCC-CEEEEECCCCCCCCCccCCchHHHHH-HhcCCcEE--EEeccH-HH
Q 013342 261 SVIYVSLGSVASM---DKKEPEEMAWGLVNSKQ-PFLWVIRPSSNNAPEGIDLLPEVLAE-AVQENGCI--VKWAPQ-KE 332 (445)
Q Consensus 261 ~~v~vs~Gs~~~~---~~~~~~~~~~al~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~n~~~--~~~~pq-~~ 332 (445)
..+||+.||-... +.-.-.+..+.+.+.|. +.++.++.+..-. ++.... +..+.+.+ -+|-|- .+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~-------~d~~~~~~k~~gl~id~y~f~psl~e 76 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFF-------GDPIDLIRKNGGLTIDGYDFSPSLTE 76 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCC-------CCHHHhhcccCCeEEEEEecCccHHH
Confidence 3799999998641 11123446777888887 6777787652211 111111 11122223 367776 66
Q ss_pred HhhccccCceeeccCchhHHHHHhhCCCcccCCc----ccchhhhHHHHHhhheeeeEeCc
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC----FGDQRVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~----~~DQ~~na~~v~~~~G~g~~~~~ 389 (445)
....+++ +|+|+|+||++|.|..|+|.|+|+- ..+|-..|..+++ .|.=..-.+
T Consensus 77 ~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~-egyL~~C~p 134 (170)
T KOG3349|consen 77 DIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE-EGYLYYCTP 134 (170)
T ss_pred HHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh-cCcEEEeec
Confidence 7777888 9999999999999999999999994 6899999999999 487665544
No 75
>PLN02275 transferase, transferring glycosyl groups
Probab=98.75 E-value=3.2e-05 Score=75.46 Aligned_cols=75 Identities=13% Similarity=0.215 Sum_probs=55.3
Q ss_pred CCcEEEE-eccHHH---HhhccccCceee-c-----cC-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeC
Q 013342 320 ENGCIVK-WAPQKE---VLSHVAVGGFWS-H-----CG-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELE 388 (445)
Q Consensus 320 ~n~~~~~-~~pq~~---lL~~~~~~~~I~-H-----gG-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 388 (445)
+|+.+.. |+|+.+ +|..+|+ +|. + -| -+++.||+++|+|+|+... ..+...+++. +.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv~~g-~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELVKDG-KNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHccCC-CCeEEEC
Confidence 4556554 788866 5999999 763 1 12 3479999999999999753 3366777774 7888875
Q ss_pred cccCHHHHHHHHHHHh
Q 013342 389 NELEREVVEKAVRRLM 404 (445)
Q Consensus 389 ~~~t~~~l~~ai~~ll 404 (445)
++++++++|.++|
T Consensus 359 ---~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---SSSELADQLLELL 371 (371)
T ss_pred ---CHHHHHHHHHHhC
Confidence 5799999998875
No 76
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.73 E-value=1.7e-05 Score=76.90 Aligned_cols=82 Identities=17% Similarity=0.119 Sum_probs=61.3
Q ss_pred hcCCcEEEEecc-HH---HHhhccccCceeeccC----chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc
Q 013342 318 VQENGCIVKWAP-QK---EVLSHVAVGGFWSHCG----WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 318 ~~~n~~~~~~~p-q~---~lL~~~~~~~~I~HgG----~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 389 (445)
...++.+.+|++ +. .++..+++ +|.-.. .+++.||+++|+|+|+... ......+... +.|..++.
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~----~~~~e~~~~~-~~g~~~~~ 314 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDV----GGIPDIVDHG-VTGYLAKP 314 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecC----CCChhheeCC-CceEEeCC
Confidence 356778889998 43 47888998 777543 5799999999999997644 3444455663 67776664
Q ss_pred ccCHHHHHHHHHHHhcCC
Q 013342 390 ELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 390 ~~t~~~l~~ai~~ll~~~ 407 (445)
.+.+++.+++.++++|+
T Consensus 315 -~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 315 -GDPEDLAEGIEWLLADP 331 (365)
T ss_pred -CCHHHHHHHHHHHHhCH
Confidence 57899999999999983
No 77
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.73 E-value=1.8e-05 Score=76.14 Aligned_cols=107 Identities=18% Similarity=0.168 Sum_probs=68.7
Q ss_pred CCcEEEEeccH-HHHhhccccCceeeccC----chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 320 ENGCIVKWAPQ-KEVLSHVAVGGFWSHCG----WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 320 ~n~~~~~~~pq-~~lL~~~~~~~~I~HgG----~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
+++.+.+...+ ..++..+++ +|..+. .+++.||+.+|+|+|+... ..+...+.+. |. .++. -+.+
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~~-g~--~~~~-~~~~ 320 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGDT-GF--LVPP-GDPE 320 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhcC-CE--EeCC-CCHH
Confidence 45666554443 568999998 776544 3799999999999998644 3445555552 44 3433 4689
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 395 VVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 395 ~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
++.++|.++++|+ +.+++..++..+.+++. =+..+.++++.+
T Consensus 321 ~l~~~i~~l~~~~--~~~~~~~~~~~~~~~~~----~s~~~~~~~~~~ 362 (365)
T cd03807 321 ALAEAIEALLADP--ALRQALGEAARERIEEN----FSIEAMVEAYEE 362 (365)
T ss_pred HHHHHHHHHHhCh--HHHHHHHHHHHHHHHHh----CCHHHHHHHHHH
Confidence 9999999999983 23333333444444332 466666666554
No 78
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.73 E-value=1.6e-05 Score=76.82 Aligned_cols=143 Identities=10% Similarity=0.116 Sum_probs=87.2
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCchHHHHH-----HhcCCcEEEEec
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLLPEVLAE-----AVQENGCIVKWA 328 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~~ 328 (445)
++..+++..|+.. ..+....+++++++. +.+++++- .+ ...+.+.+ ...+|+.+.++.
T Consensus 186 ~~~~~~l~~g~~~--~~kg~~~li~a~~~l~~~~~~~~l~i~G-~g---------~~~~~~~~~~~~~~~~~~v~~~g~~ 253 (360)
T cd04951 186 NDTFVILAVGRLV--EAKDYPNLLKAFAKLLSDYLDIKLLIAG-DG---------PLRATLERLIKALGLSNRVKLLGLR 253 (360)
T ss_pred CCCEEEEEEeeCc--hhcCcHHHHHHHHHHHhhCCCeEEEEEc-CC---------CcHHHHHHHHHhcCCCCcEEEeccc
Confidence 4456778888765 334455556655443 23444442 21 11122211 123678888877
Q ss_pred cH-HHHhhccccCceeeccC----chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHH
Q 013342 329 PQ-KEVLSHVAVGGFWSHCG----WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRL 403 (445)
Q Consensus 329 pq-~~lL~~~~~~~~I~HgG----~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~l 403 (445)
.+ ..+|..+++ +|.-.. -+++.||+.+|+|+|+. |...+...+++ .|..+.. -+.+++++++.++
T Consensus 254 ~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~-~g~~~~~---~~~~~~~~~i~~l 323 (360)
T cd04951 254 DDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD-SGLIVPI---SDPEALANKIDEI 323 (360)
T ss_pred ccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC-CceEeCC---CCHHHHHHHHHHH
Confidence 55 568999998 665432 56899999999999974 55556666666 3665443 4789999999999
Q ss_pred hcCCcHHHHHHHHHHHHHHHHH
Q 013342 404 MVGEEGEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 404 l~~~~~~~~~~~a~~l~~~~~~ 425 (445)
++++ +.+++...+-++.+.+
T Consensus 324 l~~~--~~~~~~~~~~~~~~~~ 343 (360)
T cd04951 324 LKMS--GEERDIIGARRERIVK 343 (360)
T ss_pred HhCC--HHHHHHHHHHHHHHHH
Confidence 9542 4555544443333433
No 79
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=98.72 E-value=9.6e-06 Score=80.39 Aligned_cols=81 Identities=17% Similarity=0.166 Sum_probs=57.4
Q ss_pred hcCCcEEEEeccHHH---HhhccccCceeecc---Cc-hhHHHHHhhCCCcccCCcccchhhhHHHHH---hhheeeeEe
Q 013342 318 VQENGCIVKWAPQKE---VLSHVAVGGFWSHC---GW-NSTLECLCEGVPMICRPCFGDQRVNARYVS---HVWRTGLEL 387 (445)
Q Consensus 318 ~~~n~~~~~~~pq~~---lL~~~~~~~~I~Hg---G~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~---~~~G~g~~~ 387 (445)
..+++.+.+++|+.+ +|..+++ +|+-. |. -++.||+++|+|+|+.-..+.- ...++ .. ..|...
T Consensus 303 l~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~g-~~G~l~ 376 (419)
T cd03806 303 LEDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPL---LDIVVPWDGG-PTGFLA 376 (419)
T ss_pred CCCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCCc---hheeeccCCC-CceEEe
Confidence 357899999998765 7888888 66421 22 3789999999999986543321 12233 43 567664
Q ss_pred CcccCHHHHHHHHHHHhcCC
Q 013342 388 ENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 388 ~~~~t~~~l~~ai~~ll~~~ 407 (445)
. ++++++++|.++++++
T Consensus 377 ~---d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 S---TAEEYAEAIEKILSLS 393 (419)
T ss_pred C---CHHHHHHHHHHHHhCC
Confidence 2 8899999999999974
No 80
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.71 E-value=1e-05 Score=79.81 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=58.3
Q ss_pred cCCcEEEEeccH-HHHhhccccCcee--ec--cCch-hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccC
Q 013342 319 QENGCIVKWAPQ-KEVLSHVAVGGFW--SH--CGWN-STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELE 392 (445)
Q Consensus 319 ~~n~~~~~~~pq-~~lL~~~~~~~~I--~H--gG~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t 392 (445)
.+++.+.+++++ ..++..+++ +| ++ .|.+ .+.||+++|+|+|+.+...+. ..+.. |.|+.+. -+
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~-----i~~~~-~~g~lv~--~~ 348 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG-----IDALP-GAELLVA--AD 348 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCccccc-----ccccC-CcceEeC--CC
Confidence 467888999986 448889998 66 32 3543 699999999999998764322 11232 6676664 48
Q ss_pred HHHHHHHHHHHhcC
Q 013342 393 REVVEKAVRRLMVG 406 (445)
Q Consensus 393 ~~~l~~ai~~ll~~ 406 (445)
+++++++|.++++|
T Consensus 349 ~~~la~ai~~ll~~ 362 (397)
T TIGR03087 349 PADFAAAILALLAN 362 (397)
T ss_pred HHHHHHHHHHHHcC
Confidence 89999999999998
No 81
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.69 E-value=1.8e-05 Score=75.57 Aligned_cols=133 Identities=16% Similarity=0.202 Sum_probs=80.3
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCC---CCEEEEECCCCCCCCCccCCchHHHHHH--hcCCcEEEEeccH-HH
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSK---QPFLWVIRPSSNNAPEGIDLLPEVLAEA--VQENGCIVKWAPQ-KE 332 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~pq-~~ 332 (445)
+++.+++..|+.. ..+....++++++.+. .++-+.+.+... . ...+ ....+. ..+++.+.++.+. .+
T Consensus 187 ~~~~~i~~~g~~~--~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~---~-~~~~-~~~~~~~~~~~~v~~~g~~~~~~~ 259 (353)
T cd03811 187 PDGPVILAVGRLS--PQKGFDTLIRAFALLRKEGPDARLVILGDGP---L-REEL-EALAKELGLADRVHFLGFQSNPYP 259 (353)
T ss_pred CCceEEEEEecch--hhcChHHHHHHHHHhhhcCCCceEEEEcCCc---c-HHHH-HHHHHhcCCCccEEEecccCCHHH
Confidence 4457778888876 3334555666665543 233333222100 0 0001 111111 2467788888775 45
Q ss_pred HhhccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHH---HHHHHHHhc
Q 013342 333 VLSHVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVV---EKAVRRLMV 405 (445)
Q Consensus 333 lL~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l---~~ai~~ll~ 405 (445)
++..+++ +|.- |.-+++.||+++|+|+|+.... .....+++. +.|...+. -+.+.+ .+++.++++
T Consensus 260 ~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~-~~~~~~~~~~~~i~~~~~ 331 (353)
T cd03811 260 YLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVPV-GDEAALAAAALALLDLLL 331 (353)
T ss_pred HHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEECC-CCHHHHHHHHHHHHhccC
Confidence 8999998 6643 2356899999999999986443 667778884 88888765 466676 566666666
Q ss_pred C
Q 013342 406 G 406 (445)
Q Consensus 406 ~ 406 (445)
+
T Consensus 332 ~ 332 (353)
T cd03811 332 D 332 (353)
T ss_pred C
Confidence 6
No 82
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.68 E-value=1e-06 Score=85.76 Aligned_cols=135 Identities=11% Similarity=0.147 Sum_probs=84.0
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCchHHHHHHh--cCCcEEEEeccHH-
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLLPEVLAEAV--QENGCIVKWAPQK- 331 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~pq~- 331 (445)
+.+++++.+-.... .+.+..++++++++ +.++++...++ ......+.+.. .+++.+.+.+++.
T Consensus 197 ~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~ 267 (365)
T TIGR00236 197 KRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLN--------PVVREPLHKHLGDSKRVHLIEPLEYLD 267 (365)
T ss_pred CCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCC--------hHHHHHHHHHhCCCCCEEEECCCChHH
Confidence 35666655432211 14467777877664 34455543221 01111122222 3578888766654
Q ss_pred --HHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcH
Q 013342 332 --EVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEG 409 (445)
Q Consensus 332 --~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~ 409 (445)
.++..+++ +|+-.|. .+.||+++|+|+|.++..++++. +... |.++.+. -++++|.+++.++++|
T Consensus 268 ~~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~--~d~~~i~~ai~~ll~~--- 334 (365)
T TIGR00236 268 FLNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVG--TDKENITKAAKRLLTD--- 334 (365)
T ss_pred HHHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeC--CCHHHHHHHHHHHHhC---
Confidence 46788888 9987764 47999999999999976555542 2333 7776653 4789999999999998
Q ss_pred HHHHHHH
Q 013342 410 EEMRQRA 416 (445)
Q Consensus 410 ~~~~~~a 416 (445)
+..+++.
T Consensus 335 ~~~~~~~ 341 (365)
T TIGR00236 335 PDEYKKM 341 (365)
T ss_pred hHHHHHh
Confidence 5555443
No 83
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.67 E-value=4.1e-06 Score=81.38 Aligned_cols=131 Identities=15% Similarity=0.178 Sum_probs=83.7
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhCCCCEEE-EECCCCCCCCCccCCchHHHHH-----HhcCCcEEEEeccH--HH
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLW-VIRPSSNNAPEGIDLLPEVLAE-----AVQENGCIVKWAPQ--KE 332 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~~pq--~~ 332 (445)
+.+++..|.+.....+.+..+++++.+...++-+ .++.+ ...+.+.+ ..++++.+.+|+++ ..
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g---------~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~ 250 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDG---------SDFEKCKAYSRELGIEQRIIWHGWQSQPWEV 250 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCC---------ccHHHHHHHHHHcCCCCeEEEecccCCcHHH
Confidence 4566788876543445677788888776433323 33222 11122221 23478889999854 33
Q ss_pred ---HhhccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhc
Q 013342 333 ---VLSHVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMV 405 (445)
Q Consensus 333 ---lL~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~ 405 (445)
.+..+++ +|.. |--.++.||+++|+|+|+.-. .......+++. ..|..++. -+.++++++|.++++
T Consensus 251 ~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~---~~g~~eiv~~~-~~G~lv~~-~d~~~la~~i~~l~~ 323 (359)
T PRK09922 251 VQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDC---MSGPRDIIKPG-LNGELYTP-GNIDEFVGKLNKVIS 323 (359)
T ss_pred HHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCC---CCChHHHccCC-CceEEECC-CCHHHHHHHHHHHHh
Confidence 4555677 6643 225799999999999998751 22233456663 67877764 588999999999999
Q ss_pred CC
Q 013342 406 GE 407 (445)
Q Consensus 406 ~~ 407 (445)
|+
T Consensus 324 ~~ 325 (359)
T PRK09922 324 GE 325 (359)
T ss_pred Cc
Confidence 85
No 84
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.63 E-value=5.5e-05 Score=72.93 Aligned_cols=81 Identities=21% Similarity=0.246 Sum_probs=61.2
Q ss_pred cCCcEEEEeccHHH---HhhccccCceeec----------cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeee
Q 013342 319 QENGCIVKWAPQKE---VLSHVAVGGFWSH----------CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGL 385 (445)
Q Consensus 319 ~~n~~~~~~~pq~~---lL~~~~~~~~I~H----------gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~ 385 (445)
++|+.+.+++|+++ ++..+++ +|.- |.-+++.|++++|+|+|+.+..+ ....++. ...|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~-~~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVED-GETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhC-CCceE
Confidence 47888999998655 7778888 6652 33468999999999999876532 3345555 25787
Q ss_pred EeCcccCHHHHHHHHHHHhcCC
Q 013342 386 ELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 386 ~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
..+. -+.++++++|.++++|+
T Consensus 308 ~~~~-~~~~~l~~~i~~~~~~~ 328 (355)
T cd03799 308 LVPP-GDPEALADAIERLLDDP 328 (355)
T ss_pred EeCC-CCHHHHHHHHHHHHhCH
Confidence 7764 48899999999999983
No 85
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.62 E-value=1e-05 Score=78.20 Aligned_cols=88 Identities=15% Similarity=0.213 Sum_probs=60.1
Q ss_pred hcCCcEEEEeccHHH---HhhccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcc
Q 013342 318 VQENGCIVKWAPQKE---VLSHVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENE 390 (445)
Q Consensus 318 ~~~n~~~~~~~pq~~---lL~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~ 390 (445)
..+++.+.+++|+.+ +|..+++ +|.- +..+++.||+++|+|+|+....+ ....+.+. |. .+..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~-~~--~~~~- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAGDA-AL--YFDP- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceecCc-ee--eeCC-
Confidence 457888889998864 7888887 5532 23458999999999999865432 22233342 33 3333
Q ss_pred cCHHHHHHHHHHHhcCCcHHHHHHHHHH
Q 013342 391 LEREVVEKAVRRLMVGEEGEEMRQRAKN 418 (445)
Q Consensus 391 ~t~~~l~~ai~~ll~~~~~~~~~~~a~~ 418 (445)
-+.+++.++|.++++| +..++.+.+
T Consensus 321 ~~~~~~~~~i~~l~~~---~~~~~~~~~ 345 (365)
T cd03809 321 LDPEALAAAIERLLED---PALREELRE 345 (365)
T ss_pred CCHHHHHHHHHHHhcC---HHHHHHHHH
Confidence 4789999999999998 555444433
No 86
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.62 E-value=1.6e-05 Score=76.05 Aligned_cols=151 Identities=17% Similarity=0.133 Sum_probs=93.3
Q ss_pred eEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHH--hcCCcEEEEeccHHH---Hhhc
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEA--VQENGCIVKWAPQKE---VLSH 336 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~pq~~---lL~~ 336 (445)
...+..|... ..+....+++++++.+.++++.-... + ...+.....+. ..+++.+.+++++.+ +++.
T Consensus 172 ~~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~-----~-~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 172 DYLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVS-----D-PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred CEEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCC-----C-HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 3445667763 44556678888888877766553221 0 01111111222 257899999999864 6888
Q ss_pred cccCceee----ccCc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcHHH
Q 013342 337 VAVGGFWS----HCGW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEGEE 411 (445)
Q Consensus 337 ~~~~~~I~----HgG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~ 411 (445)
+++ ++. +-|+ .++.||+++|+|+|+... ..+...+++. ..|...+. .+++.+++.+++.. .
T Consensus 244 ~d~--~v~ps~~~E~~~~~~lEAma~G~PvI~~~~----~~~~e~i~~~-~~g~l~~~---~~~l~~~l~~l~~~---~- 309 (335)
T cd03802 244 ARA--LLFPILWEEPFGLVMIEAMACGTPVIAFRR----GAVPEVVEDG-VTGFLVDS---VEELAAAVARADRL---D- 309 (335)
T ss_pred CcE--EEeCCcccCCcchHHHHHHhcCCCEEEeCC----CCchhheeCC-CcEEEeCC---HHHHHHHHHHHhcc---H-
Confidence 888 543 2343 479999999999998754 3444556662 46777653 89999999998765 2
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 412 MRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 412 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
++++++..+ ++ =+.++.++++++
T Consensus 310 -~~~~~~~~~--~~-----~s~~~~~~~~~~ 332 (335)
T cd03802 310 -RAACRRRAE--RR-----FSAARMVDDYLA 332 (335)
T ss_pred -HHHHHHHHH--Hh-----CCHHHHHHHHHH
Confidence 334443322 22 355566666654
No 87
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=98.54 E-value=0.00012 Score=71.79 Aligned_cols=132 Identities=16% Similarity=0.181 Sum_probs=80.5
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCC--CCEEEEECCCCCCCCCccCCchHHHHHH---h---cCCcEEE-EeccH
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSK--QPFLWVIRPSSNNAPEGIDLLPEVLAEA---V---QENGCIV-KWAPQ 330 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~---~~n~~~~-~~~pq 330 (445)
+..+++..|... ..+....++++++++. ..+++..++.. . ..+-+.+.+. . .+++... +++++
T Consensus 200 ~~~~i~~~Grl~--~~Kg~~~li~a~~~l~~~~~l~i~g~g~~--~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 271 (388)
T TIGR02149 200 SRPYILFVGRIT--RQKGVPHLLDAVHYIPKDVQVVLCAGAPD--T----PEVAEEVRQAVALLDRNRTGIIWINKMLPK 271 (388)
T ss_pred CceEEEEEcccc--cccCHHHHHHHHHHHhhcCcEEEEeCCCC--c----HHHHHHHHHHHHHhccccCceEEecCCCCH
Confidence 345667778765 3455677777777653 45444432221 0 1111112111 1 1234443 67776
Q ss_pred HH---HhhccccCceeec---cC-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc-ccC----HHHHHH
Q 013342 331 KE---VLSHVAVGGFWSH---CG-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN-ELE----REVVEK 398 (445)
Q Consensus 331 ~~---lL~~~~~~~~I~H---gG-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t----~~~l~~ 398 (445)
.+ ++..+|+ +|.- -| -.+++||+++|+|+|+... ......++.. +.|..++. +.+ .+++.+
T Consensus 272 ~~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i~~~-~~G~~~~~~~~~~~~~~~~l~~ 344 (388)
T TIGR02149 272 EELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVVVDG-ETGFLVPPDNSDADGFQAELAK 344 (388)
T ss_pred HHHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHhhCC-CceEEcCCCCCcccchHHHHHH
Confidence 54 7888998 7642 22 3467999999999998754 3466677774 77888765 221 289999
Q ss_pred HHHHHhcC
Q 013342 399 AVRRLMVG 406 (445)
Q Consensus 399 ai~~ll~~ 406 (445)
+|.++++|
T Consensus 345 ~i~~l~~~ 352 (388)
T TIGR02149 345 AINILLAD 352 (388)
T ss_pred HHHHHHhC
Confidence 99999998
No 88
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.52 E-value=0.00012 Score=71.48 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=58.2
Q ss_pred CCcEEEEeccH-HHHhhccccCceee--c--cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 320 ENGCIVKWAPQ-KEVLSHVAVGGFWS--H--CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 320 ~n~~~~~~~pq-~~lL~~~~~~~~I~--H--gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
+++.+.++..+ ..+|..+|+ +|. + |--.+++||+++|+|+|+-... .+...+++. ..|..++. -+.+
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i~~~-~~g~~~~~-~d~~ 326 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELVQHG-VTGALVPP-GDAV 326 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHhcCC-CceEEeCC-CCHH
Confidence 44555565443 568999998 663 2 3356999999999999997653 355566663 67777764 5789
Q ss_pred HHHHHHHHHhcC
Q 013342 395 VVEKAVRRLMVG 406 (445)
Q Consensus 395 ~l~~ai~~ll~~ 406 (445)
+++++|.++++|
T Consensus 327 ~la~~i~~l~~~ 338 (374)
T TIGR03088 327 ALARALQPYVSD 338 (374)
T ss_pred HHHHHHHHHHhC
Confidence 999999999998
No 89
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.50 E-value=1.6e-06 Score=82.65 Aligned_cols=157 Identities=17% Similarity=0.051 Sum_probs=94.7
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCCCC-EEEEECCCCCCCCCccCCchHHHHHHhcC--CcEEEEeccHHHHhhc
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSKQP-FLWVIRPSSNNAPEGIDLLPEVLAEAVQE--NGCIVKWAPQKEVLSH 336 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--n~~~~~~~pq~~lL~~ 336 (445)
+++|.+--||-..--...+..++++.+++..+ ..+.+... ... +.+.+.... ...+.+ .-.++|..
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a--------~~~-~~i~~~~~~~~~~~~~~--~~~~~m~~ 235 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSF--------FKG-KDLKEIYGDISEFEISY--DTHKALLE 235 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCC--------CcH-HHHHHHHhcCCCcEEec--cHHHHHHh
Confidence 36888988987652223444455666544332 22222111 001 222222221 222332 33569999
Q ss_pred cccCceeeccCchhHHHHHhhCCCcccCCc--ccchhhhHHHHH---hhheeeeEe-------------Cc-ccCHHHHH
Q 013342 337 VAVGGFWSHCGWNSTLECLCEGVPMICRPC--FGDQRVNARYVS---HVWRTGLEL-------------EN-ELEREVVE 397 (445)
Q Consensus 337 ~~~~~~I~HgG~gsv~eal~~GvP~v~~P~--~~DQ~~na~~v~---~~~G~g~~~-------------~~-~~t~~~l~ 397 (445)
+|+ +|+-+|..|+ |+..+|+|||+ ++ ..-|..||+++. . .|+.-.+ -. +.|++.|.
T Consensus 236 aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~-igL~Nii~~~~~~~~vvPEllQ~~~t~~~la 310 (347)
T PRK14089 236 AEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKH-IGLANIFFDFLGKEPLHPELLQEFVTVENLL 310 (347)
T ss_pred hhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCe-eehHHHhcCCCcccccCchhhcccCCHHHHH
Confidence 999 9999999999 99999999999 44 468899999998 5 3555333 22 68999999
Q ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 013342 398 KAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 398 ~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 441 (445)
+++.+ ... +.+++..+++.+.+. .|+++++++.+.
T Consensus 311 ~~i~~-~~~---~~~~~~~~~l~~~l~-----~~a~~~~A~~i~ 345 (347)
T PRK14089 311 KAYKE-MDR---EKFFKKSKELREYLK-----HGSAKNVAKILK 345 (347)
T ss_pred HHHHH-HHH---HHHHHHHHHHHHHhc-----CCHHHHHHHHHh
Confidence 99987 222 445555555555443 256666655443
No 90
>PLN00142 sucrose synthase
Probab=98.48 E-value=0.00011 Score=76.86 Aligned_cols=77 Identities=9% Similarity=0.145 Sum_probs=51.4
Q ss_pred CCcEEEE----eccHHHHhh----ccccCceeec---cCch-hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEe
Q 013342 320 ENGCIVK----WAPQKEVLS----HVAVGGFWSH---CGWN-STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLEL 387 (445)
Q Consensus 320 ~n~~~~~----~~pq~~lL~----~~~~~~~I~H---gG~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~ 387 (445)
+++.+.+ .++..+++. .+++ ||.- =|+| ++.||+++|+|+|+... ......|++. ..|..+
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdv----GG~~EIV~dG-~tG~LV 714 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQ----GGPAEIIVDG-VSGFHI 714 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCC----CCHHHHhcCC-CcEEEe
Confidence 5565544 334455554 2345 6643 4555 89999999999998644 4466677774 678888
Q ss_pred CcccCHHHHHHHHHHHh
Q 013342 388 ENELEREVVEKAVRRLM 404 (445)
Q Consensus 388 ~~~~t~~~l~~ai~~ll 404 (445)
++ -++++++++|.+++
T Consensus 715 ~P-~D~eaLA~aI~~lL 730 (815)
T PLN00142 715 DP-YHGDEAANKIADFF 730 (815)
T ss_pred CC-CCHHHHHHHHHHHH
Confidence 75 57788888887654
No 91
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.48 E-value=1.1e-05 Score=78.08 Aligned_cols=173 Identities=15% Similarity=0.107 Sum_probs=109.2
Q ss_pred hhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEeccccc
Q 013342 193 YKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVAS 272 (445)
Q Consensus 193 ~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~ 272 (445)
..+..++.++.+|...-+. +++.++.+...|-+-... ..|-. .+++...++..|++.
T Consensus 149 ~~~~~~d~ii~~S~~~~~~-----~~~~~~~~~~vi~~~~d~----------------~~~~~-~~~~~~~il~~G~~~- 205 (351)
T cd03804 149 RSAARVDYFIANSRFVARR-----IKKYYGRDATVIYPPVDT----------------DRFTP-AEEKEDYYLSVGRLV- 205 (351)
T ss_pred HHhcCCCEEEECCHHHHHH-----HHHHhCCCcEEECCCCCH----------------hhcCc-CCCCCCEEEEEEcCc-
Confidence 3467889999998754432 334344443333221110 11111 111122456677765
Q ss_pred CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHH---HhhccccCceee--ccC
Q 013342 273 MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKE---VLSHVAVGGFWS--HCG 347 (445)
Q Consensus 273 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~---lL~~~~~~~~I~--HgG 347 (445)
..+....+++++++++.+++++- .+ ...+.+.+...+|+.+.+++|+.+ ++..+++ +|. .-|
T Consensus 206 -~~K~~~~li~a~~~~~~~l~ivG-~g---------~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~e~ 272 (351)
T cd03804 206 -PYKRIDLAIEAFNKLGKRLVVIG-DG---------PELDRLRAKAGPNVTFLGRVSDEELRDLYARARA--FLFPAEED 272 (351)
T ss_pred -cccChHHHHHHHHHCCCcEEEEE-CC---------hhHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCE--EEECCcCC
Confidence 34557778888888887765553 22 122334445678999999999854 7888998 553 344
Q ss_pred ch-hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCC
Q 013342 348 WN-STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 348 ~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
.| ++.||+++|+|+|+....+ ....+++. +.|..++. -++++++++|.++++|+
T Consensus 273 ~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~-~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 273 FGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEE-QTVESLAAAVERFEKNE 327 (351)
T ss_pred CCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCC-CCHHHHHHHHHHHHhCc
Confidence 44 5789999999999986543 44456663 77888765 47899999999999983
No 92
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.45 E-value=0.00099 Score=69.78 Aligned_cols=78 Identities=10% Similarity=0.155 Sum_probs=54.3
Q ss_pred cCCcEEEEec-cH---HHHhhc-c---ccCceeec---cCc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeE
Q 013342 319 QENGCIVKWA-PQ---KEVLSH-V---AVGGFWSH---CGW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLE 386 (445)
Q Consensus 319 ~~n~~~~~~~-pq---~~lL~~-~---~~~~~I~H---gG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~ 386 (445)
.+++.+.++. +. .+++.+ + ++ ||.- =|+ .+++||+++|+|+|+.-. -..+..|++. ..|..
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adV--fV~PS~~EpFGLvvLEAMAcGlPVVAT~~----GG~~EiV~dg-~tGfL 690 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGI--FVQPALYEAFGLTVLEAMTCGLPTFATRF----GGPLEIIQDG-VSGFH 690 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcE--EEECCcccCCCHHHHHHHHcCCCEEEcCC----CCHHHHhcCC-CcEEE
Confidence 3677777764 32 345543 2 34 6642 233 489999999999998644 3566777774 77888
Q ss_pred eCcccCHHHHHHHHHHHh
Q 013342 387 LENELEREVVEKAVRRLM 404 (445)
Q Consensus 387 ~~~~~t~~~l~~ai~~ll 404 (445)
+++ -++++++++|.+++
T Consensus 691 Vdp-~D~eaLA~aL~~ll 707 (784)
T TIGR02470 691 IDP-YHGEEAAEKIVDFF 707 (784)
T ss_pred eCC-CCHHHHHHHHHHHH
Confidence 876 57899999999876
No 93
>PLN02949 transferase, transferring glycosyl groups
Probab=98.41 E-value=0.00027 Score=70.65 Aligned_cols=98 Identities=14% Similarity=0.103 Sum_probs=61.7
Q ss_pred cCCcEEEEeccHHH---HhhccccCceee---ccCch-hHHHHHhhCCCcccCCcccchhhhHHHHHh-hhe-eeeEeCc
Q 013342 319 QENGCIVKWAPQKE---VLSHVAVGGFWS---HCGWN-STLECLCEGVPMICRPCFGDQRVNARYVSH-VWR-TGLELEN 389 (445)
Q Consensus 319 ~~n~~~~~~~pq~~---lL~~~~~~~~I~---HgG~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~-~~G-~g~~~~~ 389 (445)
++++.+.+++|+.+ +|..+++ +|+ +=|+| ++.||+++|+|+|+....+--. ..+.. .-| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC--
Confidence 57899999998765 6788887 663 23444 7999999999999986543100 11111 002 34333
Q ss_pred ccCHHHHHHHHHHHhcCC-c-HHHHHHHHHHHHHHHH
Q 013342 390 ELEREVVEKAVRRLMVGE-E-GEEMRQRAKNLKEEIE 424 (445)
Q Consensus 390 ~~t~~~l~~ai~~ll~~~-~-~~~~~~~a~~l~~~~~ 424 (445)
. +.++++++|.++++++ + -..+.+++++-.+++.
T Consensus 407 ~-~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS 442 (463)
T PLN02949 407 T-TVEEYADAILEVLRMRETERLEIAAAARKRANRFS 442 (463)
T ss_pred C-CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC
Confidence 2 7899999999999852 1 1235555555444433
No 94
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.38 E-value=0.00012 Score=70.60 Aligned_cols=80 Identities=13% Similarity=0.093 Sum_probs=57.5
Q ss_pred cCCcEEEEeccH-HHHhhccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCH
Q 013342 319 QENGCIVKWAPQ-KEVLSHVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELER 393 (445)
Q Consensus 319 ~~n~~~~~~~pq-~~lL~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~ 393 (445)
.+++.+.++..+ .+++..+++ +|.- |-..+++||+.+|+|+|+....+ ....++. +.|..... -++
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~~-~~~ 318 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSLD-ESP 318 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeCC-CCH
Confidence 467888887544 558999998 6643 34678999999999999875544 3444455 44444432 357
Q ss_pred HHHHHHHHHHhcCC
Q 013342 394 EVVEKAVRRLMVGE 407 (445)
Q Consensus 394 ~~l~~ai~~ll~~~ 407 (445)
++++++|.++++|+
T Consensus 319 ~~~a~~i~~l~~~~ 332 (358)
T cd03812 319 EIWAEEILKLKSED 332 (358)
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999999994
No 95
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.36 E-value=1.3e-05 Score=77.67 Aligned_cols=130 Identities=16% Similarity=0.203 Sum_probs=81.2
Q ss_pred CCceEEEEecccc--c-CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHh--cCCcEEEEeccH---
Q 013342 259 PESVIYVSLGSVA--S-MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAV--QENGCIVKWAPQ--- 330 (445)
Q Consensus 259 ~~~~v~vs~Gs~~--~-~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~pq--- 330 (445)
+++.+++++=... . ...+.+..+++++.+.+.++++++..+. .+. ..+.+.+.+.. .+|+.+.+.++.
T Consensus 200 ~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~-p~~---~~i~~~i~~~~~~~~~v~l~~~l~~~~~ 275 (365)
T TIGR03568 200 DKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNAD-AGS---RIINEAIEEYVNEHPNFRLFKSLGQERY 275 (365)
T ss_pred CCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCC-CCc---hHHHHHHHHHhcCCCCEEEECCCChHHH
Confidence 3468778875433 2 3456788999999888766666653321 110 01112222212 367888866555
Q ss_pred HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeE-eCcccCHHHHHHHHHHHhc
Q 013342 331 KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLE-LENELEREVVEKAVRRLMV 405 (445)
Q Consensus 331 ~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~-~~~~~t~~~l~~ai~~ll~ 405 (445)
..++.++++ +||-++.|. .||...|+|+|.+- .-| .-++. |..+. + ..++++|.+++.++++
T Consensus 276 l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~--~R~----e~~~~--g~nvl~v--g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 276 LSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG--TRQ----KGRLR--ADSVIDV--DPDKEEIVKAIEKLLD 338 (365)
T ss_pred HHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec--CCc----hhhhh--cCeEEEe--CCCHHHHHHHHHHHhC
Confidence 458889998 998775555 99999999999774 111 11122 43333 4 3578999999999553
No 96
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.35 E-value=5.2e-06 Score=79.72 Aligned_cols=139 Identities=14% Similarity=0.214 Sum_probs=80.3
Q ss_pred CCCceEEEEecccccCC-hh---hHHHHHHHHHhC-CCCEEEEECCCCCCCCCccCCchHHHHHHhc--CCcEEEEeccH
Q 013342 258 APESVIYVSLGSVASMD-KK---EPEEMAWGLVNS-KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ--ENGCIVKWAPQ 330 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~-~~---~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~n~~~~~~~pq 330 (445)
.+++.+++++=...... ++ .+..+++++.+. +.++||...+.+ .....+.+... +|+.+++.+++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p--------~~~~~i~~~l~~~~~v~~~~~l~~ 249 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNP--------RGSDIIIEKLKKYDNVRLIEPLGY 249 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-H--------HHHHHHHHHHTT-TTEEEE----H
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCc--------hHHHHHHHHhcccCCEEEECCCCH
Confidence 67789999985554444 33 344456666665 667888875331 11122222222 58888876665
Q ss_pred ---HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCC
Q 013342 331 ---KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 331 ---~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
..+|.++++ +|+..| |-.-||.+.|+|+|.+ -|+-..=.-+.. |..+.+. .+.++|.+++.+++++
T Consensus 250 ~~~l~ll~~a~~--vvgdSs-GI~eEa~~lg~P~v~i---R~~geRqe~r~~--~~nvlv~--~~~~~I~~ai~~~l~~- 318 (346)
T PF02350_consen 250 EEYLSLLKNADL--VVGDSS-GIQEEAPSLGKPVVNI---RDSGERQEGRER--GSNVLVG--TDPEAIIQAIEKALSD- 318 (346)
T ss_dssp HHHHHHHHHESE--EEESSH-HHHHHGGGGT--EEEC---SSS-S-HHHHHT--TSEEEET--SSHHHHHHHHHHHHH--
T ss_pred HHHHHHHhcceE--EEEcCc-cHHHHHHHhCCeEEEe---cCCCCCHHHHhh--cceEEeC--CCHHHHHHHHHHHHhC-
Confidence 458889999 999999 4444999999999999 333333333333 5555543 6899999999999987
Q ss_pred cHHHHHHHHH
Q 013342 408 EGEEMRQRAK 417 (445)
Q Consensus 408 ~~~~~~~~a~ 417 (445)
..+.++.+
T Consensus 319 --~~~~~~~~ 326 (346)
T PF02350_consen 319 --KDFYRKLK 326 (346)
T ss_dssp --HHHHHHHH
T ss_pred --hHHHHhhc
Confidence 44444433
No 97
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=98.32 E-value=0.00023 Score=69.45 Aligned_cols=78 Identities=15% Similarity=0.158 Sum_probs=55.5
Q ss_pred cCCcEEEEec--cHH---HHhhccccCceeecc---C-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc
Q 013342 319 QENGCIVKWA--PQK---EVLSHVAVGGFWSHC---G-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 319 ~~n~~~~~~~--pq~---~lL~~~~~~~~I~Hg---G-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 389 (445)
.+++.+.++. ++. .+++.+++ ++.-+ | -.++.||+++|+|+|+.... .....+... ..|...+
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~----~~~~~i~~~-~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVG----GIPLQIEDG-ETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCC----CchhhcccC-CceEEeC-
Confidence 4667788776 433 47888888 77543 2 34899999999999987543 334556663 6676554
Q ss_pred ccCHHHHHHHHHHHhcC
Q 013342 390 ELEREVVEKAVRRLMVG 406 (445)
Q Consensus 390 ~~t~~~l~~ai~~ll~~ 406 (445)
+.+.++.+|.++++|
T Consensus 323 --~~~~~a~~i~~ll~~ 337 (372)
T cd03792 323 --TVEEAAVRILYLLRD 337 (372)
T ss_pred --CcHHHHHHHHHHHcC
Confidence 457788899999998
No 98
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.12 E-value=0.0063 Score=63.65 Aligned_cols=143 Identities=17% Similarity=0.112 Sum_probs=86.1
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHh----CCCCEEEEECCCCCCCCCccCCchHHHH---HH--hcCCcEEEEeccH
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVN----SKQPFLWVIRPSSNNAPEGIDLLPEVLA---EA--VQENGCIVKWAPQ 330 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~--~~~n~~~~~~~pq 330 (445)
+..++...|.+. ..+....+++++.+ .+.--++.++.+ ...+.+. +. ..+++.+.+|.++
T Consensus 516 ~~~vIg~VGRL~--~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G---------~~~~~L~~l~~~lgL~~~V~flG~~~d 584 (694)
T PRK15179 516 ARFTVGTVMRVD--DNKRPFLWVEAAQRFAASHPKVRFIMVGGG---------PLLESVREFAQRLGMGERILFTGLSRR 584 (694)
T ss_pred CCeEEEEEEeCC--ccCCHHHHHHHHHHHHHHCcCeEEEEEccC---------cchHHHHHHHHHcCCCCcEEEcCCcch
Confidence 345556667654 33445556666643 232223444332 1122222 22 3477888898876
Q ss_pred -HHHhhccccCceee---ccC-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHh
Q 013342 331 -KEVLSHVAVGGFWS---HCG-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLM 404 (445)
Q Consensus 331 -~~lL~~~~~~~~I~---HgG-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll 404 (445)
..+|..+++ +|. +.| -++++||+.+|+|+|+.... .....|++. ..|..++. +.+++++.+++.+++
T Consensus 585 v~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg-~~GlLv~~~d~~~~~La~aL~~ll 657 (694)
T PRK15179 585 VGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEG-VTGLTLPADTVTAPDVAEALARIH 657 (694)
T ss_pred HHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCC-CCEEEeCCCCCChHHHHHHHHHHH
Confidence 448889998 664 344 46899999999999997653 455667773 67888876 566677777777666
Q ss_pred cCCc-HHHHHHHHHHHH
Q 013342 405 VGEE-GEEMRQRAKNLK 420 (445)
Q Consensus 405 ~~~~-~~~~~~~a~~l~ 420 (445)
.+.. -+.+++++++..
T Consensus 658 ~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 658 DMCAADPGIARKAADWA 674 (694)
T ss_pred hChhccHHHHHHHHHHH
Confidence 4210 056666655443
No 99
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.11 E-value=0.0033 Score=60.18 Aligned_cols=299 Identities=12% Similarity=0.087 Sum_probs=164.5
Q ss_pred CCCccChHHHHHHHHHHHhC--CCeEEEEe-CCCCCCCCC-C-CCCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcchH
Q 013342 6 SPFQGHMTPMLQLGTILYSN--GFSITVVH-THFNPPNPS-N-HPEFNFQSIPDGLTADDVSTGINILITNLLNVNCQAP 80 (445)
Q Consensus 6 ~p~~GH~~p~l~La~~L~~~--Gh~Vt~~~-~~~~~~~~~-~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (445)
..+.|-++-..+|.++|.++ ++.+++-+ ++...+... . ...+..+-+|=+.+ ..
T Consensus 56 aaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~~---------------------~~ 114 (419)
T COG1519 56 AASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDLP---------------------IA 114 (419)
T ss_pred ecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCch---------------------HH
Confidence 35788999999999999999 77777765 322222211 1 11244444441110 11
Q ss_pred HHHHHHHHHhhccCCCCCCCCceEEEEcCCCCc--hHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCCC
Q 013342 81 FFECMVRMMEQQQQHPAGDDQIACIIYDEIFYF--PEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNK 158 (445)
Q Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 158 (445)
+...++.+ +||++|.-....| ...-++..|+|.+.++.-..
T Consensus 115 v~rFl~~~------------~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS------------------------- 157 (419)
T COG1519 115 VRRFLRKW------------RPKLLIIMETELWPNLINELKRRGIPLVLVNARLS------------------------- 157 (419)
T ss_pred HHHHHHhc------------CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeec-------------------------
Confidence 12245555 8998875555533 33567789999999643110
Q ss_pred CCcCCCCCCCCCCCCCCCcccccchHHHHHHHH--hhhccCCcEEEEcchhhhcHHHHHHHHhccC-CCceeeccCCCCC
Q 013342 159 LQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS--MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ-VPIFPIGPFHKFA 235 (445)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~-~~~~~vGp~~~~~ 235 (445)
++.-..++.+.. ...+.+.+.++.++..+-+- ++. ++ +++..+|-+-.+-
T Consensus 158 ---------------------~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~R-----f~~-LGa~~v~v~GNlKfd~ 210 (419)
T COG1519 158 ---------------------DRSFARYAKLKFLARLLFKNIDLILAQSEEDAQR-----FRS-LGAKPVVVTGNLKFDI 210 (419)
T ss_pred ---------------------hhhhHHHHHHHHHHHHHHHhcceeeecCHHHHHH-----HHh-cCCcceEEecceeecC
Confidence 000011111112 12345678888877644332 222 44 3477778777654
Q ss_pred CCCCCCCCcCCCc-hhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCC-CEEEEECCCCCCCCCccCCchHH
Q 013342 236 PFSTSCNFLNEDT-SCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQ-PFLWVIRPSSNNAPEGIDLLPEV 313 (445)
Q Consensus 236 ~~~~~~~~~~~~~-~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~-~~v~~~~~~~~~~~~~~~~~~~~ 313 (445)
.. .+.+. ....|-..-+....+.|..+|.. ...+..-....++++... -.++.+..++....+ . ++
T Consensus 211 ~~------~~~~~~~~~~~r~~l~~~r~v~iaaSTH~-GEeei~l~~~~~l~~~~~~~llIlVPRHpERf~~----v-~~ 278 (419)
T COG1519 211 EP------PPQLAAELAALRRQLGGHRPVWVAASTHE-GEEEIILDAHQALKKQFPNLLLILVPRHPERFKA----V-EN 278 (419)
T ss_pred CC------ChhhHHHHHHHHHhcCCCCceEEEecCCC-chHHHHHHHHHHHHhhCCCceEEEecCChhhHHH----H-HH
Confidence 33 11111 12223221111124556666643 233334445555554332 223333433211100 0 01
Q ss_pred HHHH---------------hcCCcEEEEeccH-HHHhhcccc----CceeeccCchhHHHHHhhCCCcccCCcccchhhh
Q 013342 314 LAEA---------------VQENGCIVKWAPQ-KEVLSHVAV----GGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVN 373 (445)
Q Consensus 314 ~~~~---------------~~~n~~~~~~~pq-~~lL~~~~~----~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~n 373 (445)
+... ...++++.|-+-- ..++.-+++ |-++-+||+| ..|.+++|+|+|.=|+..-|...
T Consensus 279 l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei 357 (419)
T COG1519 279 LLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDI 357 (419)
T ss_pred HHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHH
Confidence 1000 1235566665543 334444444 1134588887 67999999999999999999999
Q ss_pred HHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 374 ARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 374 a~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
++++.++ |.|+.++. .+.|.+++..+++|
T Consensus 358 ~~~l~~~-ga~~~v~~---~~~l~~~v~~l~~~ 386 (419)
T COG1519 358 AERLLQA-GAGLQVED---ADLLAKAVELLLAD 386 (419)
T ss_pred HHHHHhc-CCeEEECC---HHHHHHHHHHhcCC
Confidence 9999996 99999974 78899999988887
No 100
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=98.10 E-value=0.00096 Score=67.46 Aligned_cols=161 Identities=11% Similarity=0.093 Sum_probs=99.3
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhC---CCCEE-EEECCCCCCCCCccCCchHHHHHH-----hcCCcEEEEeccHH
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFL-WVIRPSSNNAPEGIDLLPEVLAEA-----VQENGCIVKWAPQK 331 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~n~~~~~~~pq~ 331 (445)
+.++++.|.+. ..+....+++|+... ..++- ..++.+ ...+.+.+. ..+++.+.++.+..
T Consensus 319 ~~~il~vGrl~--~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G---------~~~~~l~~~i~~~~l~~~V~f~G~~~~~ 387 (500)
T TIGR02918 319 PFSIITASRLA--KEKHIDWLVKAVVKAKKSVPELTFDIYGEG---------GEKQKLQKIINENQAQDYIHLKGHRNLS 387 (500)
T ss_pred CeEEEEEeccc--cccCHHHHHHHHHHHHhhCCCeEEEEEECc---------hhHHHHHHHHHHcCCCCeEEEcCCCCHH
Confidence 45667778765 445566677776542 12332 333322 112223221 24667888988888
Q ss_pred HHhhccccCceeec---cC-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc---ccC----HHHHHHHH
Q 013342 332 EVLSHVAVGGFWSH---CG-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN---ELE----REVVEKAV 400 (445)
Q Consensus 332 ~lL~~~~~~~~I~H---gG-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~---~~t----~~~l~~ai 400 (445)
+++..+++ +|.- =| ..+++||+++|+|+|+.-..+ .....++.. .-|..++. .-+ .++|+++|
T Consensus 388 ~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g-~nG~lv~~~~~~~d~~~~~~~la~~I 461 (500)
T TIGR02918 388 EVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDN-KNGYLIPIDEEEDDEDQIITALAEKI 461 (500)
T ss_pred HHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCC-CCEEEEeCCccccchhHHHHHHHHHH
Confidence 99999998 7752 33 358999999999999975421 244556663 56666642 122 78899999
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 401 RRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 401 ~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
.++++++....+.++|++.++.+... ...+...+++++
T Consensus 462 ~~ll~~~~~~~~~~~a~~~a~~fs~~-----~v~~~w~~ll~~ 499 (500)
T TIGR02918 462 VEYFNSNDIDAFHEYSYQIAEGFLTA-----NIIEKWKKLVRE 499 (500)
T ss_pred HHHhChHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHhh
Confidence 99996533455677777766665554 444455556554
No 101
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=98.10 E-value=2.3e-05 Score=61.84 Aligned_cols=123 Identities=17% Similarity=0.156 Sum_probs=78.5
Q ss_pred EEEEecccccCChhhHHHH-HHHHHhC-CCCEEEEECCCCCCCCCccCCch-HHHHHHhcCCcEEEEec--c-HHHHhhc
Q 013342 263 IYVSLGSVASMDKKEPEEM-AWGLVNS-KQPFLWVIRPSSNNAPEGIDLLP-EVLAEAVQENGCIVKWA--P-QKEVLSH 336 (445)
Q Consensus 263 v~vs~Gs~~~~~~~~~~~~-~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~~~--p-q~~lL~~ 336 (445)
+|||.||....-...+... ..-+.+. ..++|+.++++ +..| .+ ..+.+|. + .+.+...
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~--------d~kpvag--------l~v~~F~~~~kiQsli~d 65 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNG--------DIKPVAG--------LRVYGFDKEEKIQSLIHD 65 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCC--------Ccccccc--------cEEEeechHHHHHHHhhc
Confidence 6899998743111111110 2222233 34788888654 1222 11 1344443 3 3556767
Q ss_pred cccCceeeccCchhHHHHHhhCCCcccCCcc--------cchhhhHHHHHhhheeeeEeCc-cc-CHHHHHHHHHHHh
Q 013342 337 VAVGGFWSHCGWNSTLECLCEGVPMICRPCF--------GDQRVNARYVSHVWRTGLELEN-EL-EREVVEKAVRRLM 404 (445)
Q Consensus 337 ~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~--------~DQ~~na~~v~~~~G~g~~~~~-~~-t~~~l~~ai~~ll 404 (445)
+++ +|+|||.||++.++..++|.|++|-. .+|-..|..+++ ++.=+...+ +. =.+.++..+.+++
T Consensus 66 arI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~spte~~L~a~l~~s~~~v~ 140 (161)
T COG5017 66 ARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACSPTELVLQAGLQVSVADVL 140 (161)
T ss_pred ceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEcCCchhhHHhHhhhhhhhc
Confidence 777 99999999999999999999999953 489999999999 799888876 32 2344444444444
No 102
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.07 E-value=0.006 Score=59.58 Aligned_cols=76 Identities=17% Similarity=0.132 Sum_probs=53.7
Q ss_pred cCCcEEEEeccHHH---HhhccccCceee--------ccCc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeE
Q 013342 319 QENGCIVKWAPQKE---VLSHVAVGGFWS--------HCGW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLE 386 (445)
Q Consensus 319 ~~n~~~~~~~pq~~---lL~~~~~~~~I~--------HgG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~ 386 (445)
.+|+.+.+++|+.+ .|.++|+ +|. .++. +.+.|++++|+|+|+.++ ...++.. +.+..
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv--~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~~-~~~~~ 322 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDV--AILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRYE-DEVVL 322 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCE--EecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhhc-CcEEE
Confidence 37899999999766 6778888 432 2232 458999999999998763 2333442 43333
Q ss_pred eCcccCHHHHHHHHHHHhcC
Q 013342 387 LENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 387 ~~~~~t~~~l~~ai~~ll~~ 406 (445)
.. -+++++.++|.+++.+
T Consensus 323 ~~--~d~~~~~~ai~~~l~~ 340 (373)
T cd04950 323 IA--DDPEEFVAAIEKALLE 340 (373)
T ss_pred eC--CCHHHHHHHHHHHHhc
Confidence 33 3799999999998765
No 103
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.06 E-value=0.00014 Score=71.90 Aligned_cols=161 Identities=17% Similarity=0.167 Sum_probs=96.1
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhC---C--CCEEEEECCCCCCCCCccCCchHHHHHH-----hcCCcEEEEecc
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNS---K--QPFLWVIRPSSNNAPEGIDLLPEVLAEA-----VQENGCIVKWAP 329 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~n~~~~~~~p 329 (445)
++..+++.|.+.. .+.+..+++++.+. . .++.|++-+++ ...+.+.+. ..+++.+.+|++
T Consensus 229 ~~~~il~~Grl~~--~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g--------~~~~~l~~~~~~~~~~~~V~f~G~v~ 298 (407)
T cd04946 229 DTLRIVSCSYLVP--VKRVDLIIKALAALAKARPSIKIKWTHIGGG--------PLEDTLKELAESKPENISVNFTGELS 298 (407)
T ss_pred CCEEEEEeecccc--ccCHHHHHHHHHHHHHhCCCceEEEEEEeCc--------hHHHHHHHHHHhcCCCceEEEecCCC
Confidence 4466777887763 34455566666543 1 35666653321 111222111 235688889999
Q ss_pred HHH---HhhccccCceeeccC----chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHH
Q 013342 330 QKE---VLSHVAVGGFWSHCG----WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRR 402 (445)
Q Consensus 330 q~~---lL~~~~~~~~I~HgG----~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ 402 (445)
+.+ ++..+++.++|...- -.+++||+++|+|+|+... ......+.+. +.|..+...-+.++++++|.+
T Consensus 299 ~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~v----gg~~e~i~~~-~~G~l~~~~~~~~~la~~I~~ 373 (407)
T cd04946 299 NSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNV----GGTPEIVDNG-GNGLLLSKDPTPNELVSSLSK 373 (407)
T ss_pred hHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCC----CCcHHHhcCC-CcEEEeCCCCCHHHHHHHHHH
Confidence 875 444433333765543 4589999999999998643 4456677773 588887654588999999999
Q ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 013342 403 LMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 403 ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 441 (445)
+++| +..+ ++|++..++.+.+.=+.+....+|+
T Consensus 374 ll~~---~~~~---~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 374 FIDN---EEEY---QTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHhC---HHHH---HHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9998 3322 3344444443333344445554443
No 104
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.05 E-value=0.00021 Score=70.62 Aligned_cols=129 Identities=13% Similarity=0.157 Sum_probs=83.6
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCccCCchHHHHH---H--hcCCcEEEEeccHH
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEGIDLLPEVLAE---A--VQENGCIVKWAPQK 331 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~---~--~~~n~~~~~~~pq~ 331 (445)
++..+++.|... ..+.+..++++++.+ +.++-+.+-++ +...+.+.+ . ..+++.+.+|+|+.
T Consensus 221 ~~~~il~vGrl~--~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~--------G~~~~~l~~~~~~~~l~~~V~~~G~~~~~ 290 (406)
T PRK15427 221 TPLEIISVARLT--EKKGLHVAIEACRQLKEQGVAFRYRILGI--------GPWERRLRTLIEQYQLEDVVEMPGFKPSH 290 (406)
T ss_pred CCeEEEEEeCcc--hhcCHHHHHHHHHHHHhhCCCEEEEEEEC--------chhHHHHHHHHHHcCCCCeEEEeCCCCHH
Confidence 345667778775 334455566666543 33343333221 111222221 1 34778899999986
Q ss_pred H---HhhccccCceeec---------cCc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHH
Q 013342 332 E---VLSHVAVGGFWSH---------CGW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEK 398 (445)
Q Consensus 332 ~---lL~~~~~~~~I~H---------gG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ 398 (445)
+ ++..+|+ +|.- -|. .+++||+.+|+|+|+.... .....+++. ..|..++. -+.+++++
T Consensus 291 el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~----g~~E~v~~~-~~G~lv~~-~d~~~la~ 362 (406)
T PRK15427 291 EVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHS----GIPELVEAD-KSGWLVPE-NDAQALAQ 362 (406)
T ss_pred HHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCC----CchhhhcCC-CceEEeCC-CCHHHHHH
Confidence 5 7888998 6642 244 5689999999999987543 355566663 67877764 57899999
Q ss_pred HHHHHhc-C
Q 013342 399 AVRRLMV-G 406 (445)
Q Consensus 399 ai~~ll~-~ 406 (445)
+|.++++ |
T Consensus 363 ai~~l~~~d 371 (406)
T PRK15427 363 RLAAFSQLD 371 (406)
T ss_pred HHHHHHhCC
Confidence 9999999 7
No 105
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.01 E-value=0.0019 Score=65.32 Aligned_cols=133 Identities=19% Similarity=0.240 Sum_probs=81.2
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHh---CCCCE-EEEECCCCCCCCCccCCchHHH---HHH--hcCCcEEEEeccH
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVN---SKQPF-LWVIRPSSNNAPEGIDLLPEVL---AEA--VQENGCIVKWAPQ 330 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~-v~~~~~~~~~~~~~~~~~~~~~---~~~--~~~n~~~~~~~pq 330 (445)
++.+++..|.+. ..+....++++++. ...++ +++++.+.. + ...-+.+ .+. ..+|+.+.+...-
T Consensus 292 ~~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~-~----~~~~~e~~~li~~l~l~~~V~f~G~~~v 364 (475)
T cd03813 292 EPPVVGLIGRVV--PIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE-D----PEYAEECRELVESLGLEDNVKFTGFQNV 364 (475)
T ss_pred CCcEEEEEeccc--cccCHHHHHHHHHHHHHhCCCeEEEEECCCCc-C----hHHHHHHHHHHHHhCCCCeEEEcCCccH
Confidence 446667778776 33445555555543 22223 344433210 0 0011111 111 2477888886666
Q ss_pred HHHhhccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhh----h-eeeeEeCcccCHHHHHHHHH
Q 013342 331 KEVLSHVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHV----W-RTGLELENELEREVVEKAVR 401 (445)
Q Consensus 331 ~~lL~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~----~-G~g~~~~~~~t~~~l~~ai~ 401 (445)
.++|..+++ +|.- |--.+++||+++|+|+|+- |.......++.. + ..|..++. -++++++++|.
T Consensus 365 ~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv~~-~d~~~la~ai~ 437 (475)
T cd03813 365 KEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVVPP-ADPEALARAIL 437 (475)
T ss_pred HHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEECC-CCHHHHHHHHH
Confidence 779999998 6543 2346899999999999985 444455555551 0 26777664 67899999999
Q ss_pred HHhcC
Q 013342 402 RLMVG 406 (445)
Q Consensus 402 ~ll~~ 406 (445)
++++|
T Consensus 438 ~ll~~ 442 (475)
T cd03813 438 RLLKD 442 (475)
T ss_pred HHhcC
Confidence 99998
No 106
>PRK00654 glgA glycogen synthase; Provisional
Probab=98.00 E-value=0.0018 Score=65.17 Aligned_cols=132 Identities=15% Similarity=0.193 Sum_probs=76.0
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCccCCchHH---HHHHhcCCcEE-EEeccH--
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEGIDLLPEV---LAEAVQENGCI-VKWAPQ-- 330 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~n~~~-~~~~pq-- 330 (445)
+..+++..|.+. ..+.+..++++++++ +.+++++- .+ + ....+. +.+..+.++.+ .+|-..
T Consensus 281 ~~~~i~~vGRl~--~~KG~~~li~a~~~l~~~~~~lvivG-~g-----~--~~~~~~l~~l~~~~~~~v~~~~g~~~~~~ 350 (466)
T PRK00654 281 DAPLFAMVSRLT--EQKGLDLVLEALPELLEQGGQLVLLG-TG-----D--PELEEAFRALAARYPGKVGVQIGYDEALA 350 (466)
T ss_pred CCcEEEEeeccc--cccChHHHHHHHHHHHhcCCEEEEEe-cC-----c--HHHHHHHHHHHHHCCCcEEEEEeCCHHHH
Confidence 445667778765 344555566666543 45555552 21 0 011112 22334455544 466322
Q ss_pred HHHhhccccCceeec---cCch-hHHHHHhhCCCcccCCccc--chhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHh
Q 013342 331 KEVLSHVAVGGFWSH---CGWN-STLECLCEGVPMICRPCFG--DQRVNARYVSHVWRTGLELENELEREVVEKAVRRLM 404 (445)
Q Consensus 331 ~~lL~~~~~~~~I~H---gG~g-sv~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll 404 (445)
..++..+|+ +|.- -|+| +.+||+++|+|.|+.-..+ |.-.....-... +.|..++. -++++|.++|.+++
T Consensus 351 ~~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~~-~d~~~la~~i~~~l 426 (466)
T PRK00654 351 HRIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFDD-FNAEDLLRALRRAL 426 (466)
T ss_pred HHHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeCC-CCHHHHHHHHHHHH
Confidence 247889998 7642 3444 8889999999999875432 211111000232 77888775 57899999999988
Q ss_pred c
Q 013342 405 V 405 (445)
Q Consensus 405 ~ 405 (445)
+
T Consensus 427 ~ 427 (466)
T PRK00654 427 E 427 (466)
T ss_pred H
Confidence 6
No 107
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.97 E-value=0.00048 Score=67.43 Aligned_cols=82 Identities=11% Similarity=0.190 Sum_probs=61.9
Q ss_pred hcCCcEEEEeccHHH---HhhccccCceeec----cCc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc
Q 013342 318 VQENGCIVKWAPQKE---VLSHVAVGGFWSH----CGW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 318 ~~~n~~~~~~~pq~~---lL~~~~~~~~I~H----gG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 389 (445)
...++.+.+++|+.+ ++..+|+ +|.. -|. .++.||+++|+|+|+.... .+...+++. ..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~~-~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLEG-ITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhcccC-CceEEEeC
Confidence 456788889998755 6889998 6653 333 5778999999999997653 355566663 67765533
Q ss_pred ccCHHHHHHHHHHHhcC
Q 013342 390 ELEREVVEKAVRRLMVG 406 (445)
Q Consensus 390 ~~t~~~l~~ai~~ll~~ 406 (445)
..++++++++|.++++|
T Consensus 328 ~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 328 PMTSDSIISDINRTLAD 344 (380)
T ss_pred CCCHHHHHHHHHHHHcC
Confidence 45899999999999999
No 108
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.92 E-value=0.0002 Score=61.48 Aligned_cols=133 Identities=20% Similarity=0.262 Sum_probs=87.6
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhC----CCCE-EEEECCCCCCCCCccCCchHHHHH--HhcCCcEEEEeccH
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNS----KQPF-LWVIRPSSNNAPEGIDLLPEVLAE--AVQENGCIVKWAPQ 330 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~-v~~~~~~~~~~~~~~~~~~~~~~~--~~~~n~~~~~~~pq 330 (445)
.+++.+++..|+... .+....+++++..+ ...+ +++++.. .....+ ....+ ...+++.+.+++++
T Consensus 12 ~~~~~~il~~g~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~~-----~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 83 (172)
T PF00534_consen 12 PDKKKIILFIGRLDP--EKGIDLLIEAFKKLKEKKNPNYKLVIVGDG-----EYKKEL-KNLIEKLNLKENIIFLGYVPD 83 (172)
T ss_dssp -TTSEEEEEESESSG--GGTHHHHHHHHHHHHHHHHTTEEEEEESHC-----CHHHHH-HHHHHHTTCGTTEEEEESHSH
T ss_pred CCCCeEEEEEecCcc--ccCHHHHHHHHHHHHhhcCCCeEEEEEccc-----cccccc-ccccccccccccccccccccc
Confidence 456677788887753 34556666666543 2333 3333211 000011 11111 24578999999983
Q ss_pred ---HHHhhccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHH
Q 013342 331 ---KEVLSHVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRL 403 (445)
Q Consensus 331 ---~~lL~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~l 403 (445)
..++..+++ +|+. +...++.||+.+|+|+|+- |...+...+... +.|..++.. +.+++.++|.++
T Consensus 84 ~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~-~~g~~~~~~-~~~~l~~~i~~~ 155 (172)
T PF00534_consen 84 DELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDG-VNGFLFDPN-DIEELADAIEKL 155 (172)
T ss_dssp HHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTT-TSEEEESTT-SHHHHHHHHHHH
T ss_pred ccccccccccee--ccccccccccccccccccccccceeec----cccCCceeeccc-cceEEeCCC-CHHHHHHHHHHH
Confidence 448888998 8876 5677999999999999975 566777788884 779888864 999999999999
Q ss_pred hcC
Q 013342 404 MVG 406 (445)
Q Consensus 404 l~~ 406 (445)
+.|
T Consensus 156 l~~ 158 (172)
T PF00534_consen 156 LND 158 (172)
T ss_dssp HHH
T ss_pred HCC
Confidence 998
No 109
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.91 E-value=0.0021 Score=61.96 Aligned_cols=191 Identities=20% Similarity=0.174 Sum_probs=105.3
Q ss_pred cCCCceeec-cCCCCCCCCCCCCCcCCCchhchh-hccCCCCceEEEEecccccCChhhHHHHHHHHHh---C--CCCEE
Q 013342 221 CQVPIFPIG-PFHKFAPFSTSCNFLNEDTSCISW-LNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVN---S--KQPFL 293 (445)
Q Consensus 221 ~~~~~~~vG-p~~~~~~~~~~~~~~~~~~~l~~w-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~---~--~~~~v 293 (445)
.+.++.||| |+...... ........+. ++ .++++|-+--||-..-=...+..++++.+. . +.+++
T Consensus 151 ~g~~~~~VGHPl~d~~~~------~~~~~~~~~~~l~--~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fv 222 (373)
T PF02684_consen 151 HGVPVTYVGHPLLDEVKP------EPDRAEAREKLLD--PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFV 222 (373)
T ss_pred cCCCeEEECCcchhhhcc------CCCHHHHHHhcCC--CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 457899999 55543322 1111112222 33 677899999997654111223334555433 2 23455
Q ss_pred EEECCCCCCCCCccCCchHHHHH---HhcCCcEEE-EeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCc-cc
Q 013342 294 WVIRPSSNNAPEGIDLLPEVLAE---AVQENGCIV-KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC-FG 368 (445)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~n~~~~-~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~-~~ 368 (445)
+...+. .....+.+ ....++.+. ..-.-.++|..+++ .+.-+| ..++|+...|+|||++=- ..
T Consensus 223 vp~a~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~ 290 (373)
T PF02684_consen 223 VPVAPE---------VHEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSP 290 (373)
T ss_pred EecCCH---------HHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcH
Confidence 444221 01111111 112233333 22244668999998 665555 357899999999998742 22
Q ss_pred chhhhHHHHHhhhee------------eeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 013342 369 DQRVNARYVSHVWRT------------GLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYK 435 (445)
Q Consensus 369 DQ~~na~~v~~~~G~------------g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 435 (445)
=-...|+++.+ ... -.++-. +.|++.|.+++.++++| +..++..+...+.+++....+.....
T Consensus 291 lt~~iak~lvk-~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (373)
T PF02684_consen 291 LTYFIAKRLVK-VKYISLPNIIAGREVVPELIQEDATPENIAAELLELLEN---PEKRKKQKELFREIRQLLGPGASSRA 366 (373)
T ss_pred HHHHHHHHhhc-CCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHhhhhccCCHH
Confidence 33445555544 222 111112 68999999999999999 55566666666666666555555433
No 110
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=97.91 E-value=0.0037 Score=63.18 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=75.9
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHh---CCCCEEEEECCCCCCCCCccCCchHHH---HHHhcCCcEEEEeccHH-
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVN---SKQPFLWVIRPSSNNAPEGIDLLPEVL---AEAVQENGCIVKWAPQK- 331 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~pq~- 331 (445)
++..+++..|.+. ..+.+..+++++.+ .+.+++++-.+. ....+.+ ....++|+.+....++.
T Consensus 294 ~~~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~lvi~G~g~--------~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 363 (476)
T cd03791 294 PDAPLFGFVGRLT--EQKGIDLLLEALPELLELGGQLVILGSGD--------PEYEEALRELAARYPGRVAVLIGYDEAL 363 (476)
T ss_pred CCCCEEEEEeecc--ccccHHHHHHHHHHHHHcCcEEEEEecCC--------HHHHHHHHHHHHhCCCcEEEEEeCCHHH
Confidence 3446677788776 33445555555543 344554443211 1111222 22235677765434443
Q ss_pred --HHhhccccCceeec---cCc-hhHHHHHhhCCCcccCCcccchhhhHHHHH------hhheeeeEeCcccCHHHHHHH
Q 013342 332 --EVLSHVAVGGFWSH---CGW-NSTLECLCEGVPMICRPCFGDQRVNARYVS------HVWRTGLELENELEREVVEKA 399 (445)
Q Consensus 332 --~lL~~~~~~~~I~H---gG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~------~~~G~g~~~~~~~t~~~l~~a 399 (445)
.++..+++ ++.- -|. .+.+||+++|+|+|+....+ ....+. .. |.|..++. -+++++.++
T Consensus 364 ~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg----~~e~v~~~~~~~~~-~~G~~~~~-~~~~~l~~~ 435 (476)
T cd03791 364 AHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGG----LADTVIDYNEDTGE-GTGFVFEG-YNADALLAA 435 (476)
T ss_pred HHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCC----ccceEeCCcCCCCC-CCeEEeCC-CCHHHHHHH
Confidence 37788888 6643 123 37789999999999876532 122222 32 58888875 578999999
Q ss_pred HHHHhcC
Q 013342 400 VRRLMVG 406 (445)
Q Consensus 400 i~~ll~~ 406 (445)
+.+++++
T Consensus 436 i~~~l~~ 442 (476)
T cd03791 436 LRRALAL 442 (476)
T ss_pred HHHHHHH
Confidence 9998863
No 111
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.88 E-value=0.013 Score=58.14 Aligned_cols=123 Identities=12% Similarity=0.101 Sum_probs=75.3
Q ss_pred EEEEecccccCChhhHHHHHHHHHhCC---CCE-EEEECCCCCCCCCccCCchHHHHHHhcC---Cc-EEEEeccHHHHh
Q 013342 263 IYVSLGSVASMDKKEPEEMAWGLVNSK---QPF-LWVIRPSSNNAPEGIDLLPEVLAEAVQE---NG-CIVKWAPQKEVL 334 (445)
Q Consensus 263 v~vs~Gs~~~~~~~~~~~~~~al~~~~---~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~---n~-~~~~~~pq~~lL 334 (445)
+.+..|-+. ..+.+..++++++.+. ..+ +++++.+ ...+.+.+..++ +. .+.++.+..+++
T Consensus 230 ~~l~vGRL~--~eK~~~~Li~a~~~l~~~~~~~~l~ivGdG---------p~~~~L~~~a~~l~l~~~vf~G~~~~~~~~ 298 (462)
T PLN02846 230 GAYYIGKMV--WSKGYKELLKLLHKHQKELSGLEVDLYGSG---------EDSDEVKAAAEKLELDVRVYPGRDHADPLF 298 (462)
T ss_pred EEEEEecCc--ccCCHHHHHHHHHHHHhhCCCeEEEEECCC---------ccHHHHHHHHHhcCCcEEEECCCCCHHHHH
Confidence 344556554 4455777777776431 123 3444332 122333332221 12 344666777799
Q ss_pred hccccCceeecc----CchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCC
Q 013342 335 SHVAVGGFWSHC----GWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 335 ~~~~~~~~I~Hg----G~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
...|+ ||.-+ =-.+++||+++|+|+|+.-..+ + ..+.+. +-|...+ +.+++.+++.++|+++
T Consensus 299 ~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~-~ng~~~~---~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 299 HDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQF-PNCRTYD---DGKGFVRATLKALAEE 364 (462)
T ss_pred HhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecC-CceEecC---CHHHHHHHHHHHHccC
Confidence 99998 88763 2568999999999999986543 2 444443 5555542 6789999999999863
No 112
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.84 E-value=0.0073 Score=61.12 Aligned_cols=195 Identities=15% Similarity=0.154 Sum_probs=99.6
Q ss_pred cCCCceeec-cCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHH--hC--CCCEEEE
Q 013342 221 CQVPIFPIG-PFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLV--NS--KQPFLWV 295 (445)
Q Consensus 221 ~~~~~~~vG-p~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~--~~--~~~~v~~ 295 (445)
.+.++.||| |+....+. .+..++..+-+.-.+++++|-+--||-..-=...+..++++.+ .. +.++++.
T Consensus 379 ~gv~v~yVGHPL~d~i~~------~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp 452 (608)
T PRK01021 379 SPLRTVYLGHPLVETISS------FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVS 452 (608)
T ss_pred cCCCeEEECCcHHhhccc------CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEe
Confidence 568899999 66543221 1111112222222346678889889765422223444666666 33 3345443
Q ss_pred ECCCCCCCCCccCCchHHHHHHhc-CC---cEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCc-ccch
Q 013342 296 IRPSSNNAPEGIDLLPEVLAEAVQ-EN---GCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC-FGDQ 370 (445)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~-~n---~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~-~~DQ 370 (445)
..+. ...+.+.+... .+ +.++.--...+++..||+ .+.-+|- .++|+...|+|||++=- ..=-
T Consensus 453 ~a~~---------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lt 520 (608)
T PRK01021 453 SANP---------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQTPTIVTCQLRPFD 520 (608)
T ss_pred cCch---------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhCCCEEEEEecCHHH
Confidence 3211 01112222121 11 122211012579999998 7776774 46799999999998632 2222
Q ss_pred hhhHHHHHh--------------hheeeeEeC--c-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCCh
Q 013342 371 RVNARYVSH--------------VWRTGLELE--N-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSS 433 (445)
Q Consensus 371 ~~na~~v~~--------------~~G~g~~~~--~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~ 433 (445)
...|+++.+ + .+=.++- . +.|++.|.+++ ++|.| +.++++.++=-+++++.. |+.
T Consensus 521 y~Iak~Lvki~i~yIsLpNIIagr-~VvPEllqgQ~~~tpe~La~~l-~lL~d---~~~r~~~~~~l~~lr~~L---g~~ 592 (608)
T PRK01021 521 TFLAKYIFKIILPAYSLPNIILGS-TIFPEFIGGKKDFQPEEVAAAL-DILKT---SQSKEKQKDACRDLYQAM---NES 592 (608)
T ss_pred HHHHHHHHhccCCeeehhHHhcCC-CcchhhcCCcccCCHHHHHHHH-HHhcC---HHHHHHHHHHHHHHHHHh---cCC
Confidence 234455443 1 2222222 2 67899999997 88888 444443333333333332 333
Q ss_pred HHHHHHHH
Q 013342 434 YKSLNEFL 441 (445)
Q Consensus 434 ~~~~~~~~ 441 (445)
+-+-+|.+
T Consensus 593 ~~~~~~~~ 600 (608)
T PRK01021 593 ASTMKECL 600 (608)
T ss_pred CCCHHHHH
Confidence 34444443
No 113
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.83 E-value=0.00048 Score=67.67 Aligned_cols=136 Identities=19% Similarity=0.199 Sum_probs=79.9
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHH------hcCCcEEEEeccHH
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEA------VQENGCIVKWAPQK 331 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~n~~~~~~~pq~ 331 (445)
+++.++|.||......+++.+..-.+.|++.+...+|...... . -...+.+. .++++.+.++.|+.
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~-~-------~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ 353 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPA-S-------GEARLRRRFAAHGVDPDRIIFSPVAPRE 353 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETST-T-------HHHHHHHHHHHTTS-GGGEEEEE---HH
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCH-H-------HHHHHHHHHHHcCCChhhEEEcCCCCHH
Confidence 5667999999999999999999999999999998888875331 0 11222221 24778888888876
Q ss_pred HHh---hccccCcee---eccCchhHHHHHhhCCCcccCCccc-chhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHh
Q 013342 332 EVL---SHVAVGGFW---SHCGWNSTLECLCEGVPMICRPCFG-DQRVNARYVSHVWRTGLELENELEREVVEKAVRRLM 404 (445)
Q Consensus 332 ~lL---~~~~~~~~I---~HgG~gsv~eal~~GvP~v~~P~~~-DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll 404 (445)
+-| ..+|+ ++ ..+|..|++|||+.|||+|..|-.. =...-|..+.. +|+.-.+- .+.++-.+.-.++-
T Consensus 354 ehl~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~-lGl~ElIA--~s~~eYv~~Av~La 428 (468)
T PF13844_consen 354 EHLRRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRA-LGLPELIA--DSEEEYVEIAVRLA 428 (468)
T ss_dssp HHHHHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHH-HT-GGGB---SSHHHHHHHHHHHH
T ss_pred HHHHHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHH-cCCchhcC--CCHHHHHHHHHHHh
Confidence 644 44666 44 3578999999999999999999543 33344455566 58775443 35566555555777
Q ss_pred cC
Q 013342 405 VG 406 (445)
Q Consensus 405 ~~ 406 (445)
+|
T Consensus 429 ~D 430 (468)
T PF13844_consen 429 TD 430 (468)
T ss_dssp H-
T ss_pred CC
Confidence 77
No 114
>PLN02316 synthase/transferase
Probab=97.81 E-value=0.032 Score=60.41 Aligned_cols=161 Identities=9% Similarity=0.075 Sum_probs=87.3
Q ss_pred eEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCccCCchHH---HHHH----hcCCcEEEEeccHH
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEGIDLLPEV---LAEA----VQENGCIVKWAPQK 331 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~----~~~n~~~~~~~pq~ 331 (445)
.++...|.+. ..+.+..+++|+..+ +.++|+ ++.++. ..+-.. +... .++++.+....+..
T Consensus 841 plVg~VGRL~--~qKGvdlLi~Al~~ll~~~~qlVI-vG~Gpd------~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~ 911 (1036)
T PLN02316 841 PLVGIITRLT--HQKGIHLIKHAIWRTLERNGQVVL-LGSAPD------PRIQNDFVNLANQLHSSHHDRARLCLTYDEP 911 (1036)
T ss_pred eEEEEEeccc--cccCHHHHHHHHHHHhhcCcEEEE-EeCCCC------HHHHHHHHHHHHHhCccCCCeEEEEecCCHH
Confidence 4555566554 445566666666553 455544 333210 001111 2222 23566666555543
Q ss_pred ---HHhhccccCceeecc---Cc-hhHHHHHhhCCCcccCCccc--chhh-------hHHHHHhhheeeeEeCcccCHHH
Q 013342 332 ---EVLSHVAVGGFWSHC---GW-NSTLECLCEGVPMICRPCFG--DQRV-------NARYVSHVWRTGLELENELEREV 395 (445)
Q Consensus 332 ---~lL~~~~~~~~I~Hg---G~-gsv~eal~~GvP~v~~P~~~--DQ~~-------na~~v~~~~G~g~~~~~~~t~~~ 395 (445)
.++..+|+ |+.-+ |. .+.+||+++|+|.|+....+ |.-. .+...... +.|...+. .+++.
T Consensus 912 lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~-~tGflf~~-~d~~a 987 (1036)
T PLN02316 912 LSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLE-PNGFSFDG-ADAAG 987 (1036)
T ss_pred HHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccC-CceEEeCC-CCHHH
Confidence 47888998 77432 32 48899999999988865532 1111 11111111 46777764 68899
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 013342 396 VEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEF 440 (445)
Q Consensus 396 l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 440 (445)
|..+|.+++.+ |.+..+.+++..++++...=+-.+.+.++
T Consensus 988 La~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y 1027 (1036)
T PLN02316 988 VDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDY 1027 (1036)
T ss_pred HHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 99999999986 33334444444444433333444444444
No 115
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.74 E-value=0.0045 Score=60.28 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=66.0
Q ss_pred cCCcEEEEeccH-HHHhhccccCceeec--cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHH
Q 013342 319 QENGCIVKWAPQ-KEVLSHVAVGGFWSH--CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREV 395 (445)
Q Consensus 319 ~~n~~~~~~~pq-~~lL~~~~~~~~I~H--gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~ 395 (445)
++++.+.++.++ ..++..+++-.+.++ |...+++||+.+|+|+|+..... .....++.. ..|..++. -+.++
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~-~d~~~ 334 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPK-GDIEA 334 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCC-CcHHH
Confidence 456777777665 458999998333343 23458999999999999865432 234556663 77877764 57899
Q ss_pred HHHHHHHHhcCCc-HHHHHHHHHHHHH
Q 013342 396 VEKAVRRLMVGEE-GEEMRQRAKNLKE 421 (445)
Q Consensus 396 l~~ai~~ll~~~~-~~~~~~~a~~l~~ 421 (445)
++++|.++++|++ ...+.+++++.++
T Consensus 335 la~~i~~ll~~~~~~~~~~~~a~~~~~ 361 (372)
T cd04949 335 LAEAIIELLNDPKLLQKFSEAAYENAE 361 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 9999999999842 2234444444433
No 116
>PRK10125 putative glycosyl transferase; Provisional
Probab=97.50 E-value=0.092 Score=51.83 Aligned_cols=116 Identities=12% Similarity=0.053 Sum_probs=69.1
Q ss_pred eEEEEecccccCChhhHHHHHHHHHhCCCCEE-EEECCCCCCCCCccCCchHHHHHHhcCCcEEEEecc-H---HHHhhc
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVNSKQPFL-WVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAP-Q---KEVLSH 336 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p-q---~~lL~~ 336 (445)
.+++..|.......+....+++|+...+.++- +.++.++ +. ...++...++.. + .+++..
T Consensus 242 ~~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~----------~~-----~~~~v~~~g~~~~~~~l~~~y~~ 306 (405)
T PRK10125 242 PKIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFS----------PF-----TAGNVVNHGFETDKRKLMSALNQ 306 (405)
T ss_pred CEEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCC----------cc-----cccceEEecCcCCHHHHHHHHHh
Confidence 34455555332234556778999988765543 3333220 00 123445556553 2 336677
Q ss_pred cccCceeecc----CchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHH
Q 013342 337 VAVGGFWSHC----GWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVR 401 (445)
Q Consensus 337 ~~~~~~I~Hg----G~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~ 401 (445)
+|+ ||.-. --.+++||+++|+|+|+....+ ....+.. +.|..++. -++++|++++.
T Consensus 307 aDv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv~~--~~G~lv~~-~d~~~La~~~~ 366 (405)
T PRK10125 307 MDA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA----AREVLQK--SGGKTVSE-EEVLQLAQLSK 366 (405)
T ss_pred CCE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHHhEeC--CcEEEECC-CCHHHHHhccC
Confidence 888 77533 2458999999999999997765 2333433 56887775 46788887543
No 117
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.48 E-value=0.0019 Score=61.18 Aligned_cols=137 Identities=13% Similarity=0.150 Sum_probs=89.4
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCccCCchHHHHHHhc--CCcEEE---Eecc
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ--ENGCIV---KWAP 329 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~n~~~~---~~~p 329 (445)
+++..+.+|+=-..... +.++.+++++.+. ...+.+++..+.. +.+.+-....+. +|+.+. +|.+
T Consensus 202 ~~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~------~~v~e~~~~~L~~~~~v~li~pl~~~~ 274 (383)
T COG0381 202 KDKKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPR------PRVRELVLKRLKNVERVKLIDPLGYLD 274 (383)
T ss_pred ccCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCC------hhhhHHHHHHhCCCCcEEEeCCcchHH
Confidence 45568888775444433 5566676666442 1344455543321 011111112333 347765 6778
Q ss_pred HHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcH
Q 013342 330 QKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEG 409 (445)
Q Consensus 330 q~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~ 409 (445)
...++.++-+ ++|-+| |-.=||-..|+|++++=..-+++. +++. |.-+.+. .+.+.|.+++.+++++
T Consensus 275 f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE---~v~a--gt~~lvg--~~~~~i~~~~~~ll~~--- 341 (383)
T COG0381 275 FHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE---GVEA--GTNILVG--TDEENILDAATELLED--- 341 (383)
T ss_pred HHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc---ceec--CceEEeC--ccHHHHHHHHHHHhhC---
Confidence 8889999988 998877 456789999999999998888887 3333 5555554 5779999999999999
Q ss_pred HHHHH
Q 013342 410 EEMRQ 414 (445)
Q Consensus 410 ~~~~~ 414 (445)
+...+
T Consensus 342 ~~~~~ 346 (383)
T COG0381 342 EEFYE 346 (383)
T ss_pred hHHHH
Confidence 44444
No 118
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.44 E-value=0.026 Score=53.59 Aligned_cols=200 Identities=17% Similarity=0.165 Sum_probs=104.8
Q ss_pred cCCCceeec-cCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEE
Q 013342 221 CQVPIFPIG-PFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLW 294 (445)
Q Consensus 221 ~~~~~~~vG-p~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~ 294 (445)
++-+..||| |+....+. .+......+-+....+++++.+--||-.+--...+..+.++..++ +.++++
T Consensus 154 ~g~~~~yVGHpl~d~i~~------~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vl 227 (381)
T COG0763 154 FGLPCTYVGHPLADEIPL------LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVL 227 (381)
T ss_pred cCCCeEEeCChhhhhccc------cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEE
Confidence 556699999 66544332 112222233333346677999999987651111223344444332 346666
Q ss_pred EECCCCCCCCCccCCchHHHHHHhcCCc-EEEEec-cH--HHHhhccccCceeeccCchhHHHHHhhCCCcccCCc-ccc
Q 013342 295 VIRPSSNNAPEGIDLLPEVLAEAVQENG-CIVKWA-PQ--KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC-FGD 369 (445)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~-~~~~~~-pq--~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~-~~D 369 (445)
-+.+.. ...+-. +....+. ...-++ ++ ..++..||+ .+.-+|- -++|+..+|+|||+.=- ..=
T Consensus 228 p~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~i 295 (381)
T COG0763 228 PLVNAK------YRRIIE---EALKWEVAGLSLILIDGEKRKAFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPI 295 (381)
T ss_pred ecCcHH------HHHHHH---HHhhccccCceEEecCchHHHHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHH
Confidence 553220 000111 1111221 122222 22 337888888 6666664 46799999999998621 111
Q ss_pred hhhhHHHHHhhheee------------eEeCc-ccCHHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHhcCCChHH
Q 013342 370 QRVNARYVSHVWRTG------------LELEN-ELEREVVEKAVRRLMVGEE-GEEMRQRAKNLKEEIELCITEGGSSYK 435 (445)
Q Consensus 370 Q~~na~~v~~~~G~g------------~~~~~-~~t~~~l~~ai~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~ 435 (445)
-...|++.-. .... .++-. ..+++.|.+++..++.|+. -+.+++..++|.+.++. ++.++.
T Consensus 296 t~~iak~lvk-~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~----~~~~e~ 370 (381)
T COG0763 296 TYFIAKRLVK-LPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRE----DPASEI 370 (381)
T ss_pred HHHHHHHhcc-CCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcC----CcHHHH
Confidence 1233444433 2221 11111 6899999999999999931 12445555555555544 457777
Q ss_pred HHHHHHHH
Q 013342 436 SLNEFLEF 443 (445)
Q Consensus 436 ~~~~~~~~ 443 (445)
+++.+++-
T Consensus 371 aA~~vl~~ 378 (381)
T COG0763 371 AAQAVLEL 378 (381)
T ss_pred HHHHHHHH
Confidence 77776654
No 119
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.41 E-value=0.073 Score=48.91 Aligned_cols=104 Identities=15% Similarity=0.044 Sum_probs=65.7
Q ss_pred CccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCCCCCCCCCCCCh-hHHHHHHHHHhcchHHHHHH
Q 013342 8 FQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN-PSNHPEFNFQSIPDGLTADDVSTGI-NILITNLLNVNCQAPFFECM 85 (445)
Q Consensus 8 ~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 85 (445)
-.-|+..|-.|-+.|.++||+|.+-+-++..-. .-..-|+.+..+.+--. . .+ +.+. .... ..-.+.+++
T Consensus 9 n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~g~---~--tl~~Kl~--~~~e-R~~~L~ki~ 80 (346)
T COG1817 9 NPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSIGKHGG---V--TLKEKLL--ESAE-RVYKLSKII 80 (346)
T ss_pred CcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCCeEeecccCC---c--cHHHHHH--HHHH-HHHHHHHHH
Confidence 345888899999999999999998776543322 22334788887774210 0 12 1111 1111 112222333
Q ss_pred HHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccch
Q 013342 86 VRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTS 132 (445)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~ 132 (445)
.+. +||+.+. -..+.+..+|.-+|+|++.+.-..
T Consensus 81 ~~~------------kpdv~i~-~~s~~l~rvafgLg~psIi~~D~e 114 (346)
T COG1817 81 AEF------------KPDVAIG-KHSPELPRVAFGLGIPSIIFVDNE 114 (346)
T ss_pred hhc------------CCceEee-cCCcchhhHHhhcCCceEEecCCh
Confidence 333 9999999 467778899999999999976544
No 120
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.37 E-value=0.001 Score=63.84 Aligned_cols=111 Identities=18% Similarity=0.235 Sum_probs=79.9
Q ss_pred hcCCcEEEEeccHHHHh---hccccCceeecc-------C------chhHHHHHhhCCCcccCCcccchhhhHHHHHhhh
Q 013342 318 VQENGCIVKWAPQKEVL---SHVAVGGFWSHC-------G------WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVW 381 (445)
Q Consensus 318 ~~~n~~~~~~~pq~~lL---~~~~~~~~I~Hg-------G------~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~ 381 (445)
..+|+.+.+|+|++++. .. +.+++...- . -+-+.+.+++|+|+|+. ++...+..|++.
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~----~~~~~~~~V~~~- 278 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW----SKAAIADFIVEN- 278 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----CCccHHHHHHhC-
Confidence 35788999999998753 43 443333211 1 12367789999999985 567888999995
Q ss_pred eeeeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 382 RTGLELENELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 382 G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
++|+.++ +.+++.+++.++.. ++...|++|++++++++++- ---++++++++.
T Consensus 279 ~~G~~v~---~~~el~~~l~~~~~-~~~~~m~~n~~~~~~~~~~g----~~~~~~~~~~~~ 331 (333)
T PRK09814 279 GLGFVVD---SLEELPEIIDNITE-EEYQEMVENVKKISKLLRNG----YFTKKALVDAIK 331 (333)
T ss_pred CceEEeC---CHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHHh
Confidence 9999987 56789999988643 33467899999999999873 455666666654
No 121
>PLN02501 digalactosyldiacylglycerol synthase
Probab=97.36 E-value=0.093 Score=54.13 Aligned_cols=122 Identities=19% Similarity=0.146 Sum_probs=73.0
Q ss_pred eEEEEecccccCChhhHHHHHHHHHhCC---CCE-EEEECCCCCCCCCccCCchHHHHHHhc---CCcEEEEeccHH-HH
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVNSK---QPF-LWVIRPSSNNAPEGIDLLPEVLAEAVQ---ENGCIVKWAPQK-EV 333 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~---~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~---~n~~~~~~~pq~-~l 333 (445)
++|+ |-+. ..+.+..++++++.+. ..+ +++++.+ ..-+.+....+ -++.+.++.++. ++
T Consensus 549 iLfV--GRLa--~EKGld~LLeAla~L~~~~pnvrLvIVGDG---------P~reeLe~la~eLgL~V~FLG~~dd~~~l 615 (794)
T PLN02501 549 AYFL--GKMV--WAKGYRELIDLLAKHKNELDGFNLDVFGNG---------EDAHEVQRAAKRLDLNLNFLKGRDHADDS 615 (794)
T ss_pred eEEE--Eccc--ccCCHHHHHHHHHHHHhhCCCeEEEEEcCC---------ccHHHHHHHHHHcCCEEEecCCCCCHHHH
Confidence 5554 4433 4566777888876431 123 2333322 12223332222 235556666654 48
Q ss_pred hhccccCceeecc---C-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCC
Q 013342 334 LSHVAVGGFWSHC---G-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 334 L~~~~~~~~I~Hg---G-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
+..+++ ||.-+ | -.+++||+++|+|+|+.-..+... +... +.|... -+.+++.++|.++|+|+
T Consensus 616 yasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g-~nGll~---~D~EafAeAI~~LLsd~ 682 (794)
T PLN02501 616 LHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSF-PNCLTY---KTSEDFVAKVKEALANE 682 (794)
T ss_pred HHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eeec-CCeEec---CCHHHHHHHHHHHHhCc
Confidence 999998 77532 3 458899999999999987765321 3331 333322 36899999999999984
No 122
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.35 E-value=0.00054 Score=56.10 Aligned_cols=80 Identities=24% Similarity=0.275 Sum_probs=50.5
Q ss_pred cCCcEEEEeccH-HHHhhccccCceeec--cC-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 319 QENGCIVKWAPQ-KEVLSHVAVGGFWSH--CG-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 319 ~~n~~~~~~~pq-~~lL~~~~~~~~I~H--gG-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
.+|+.+.+|++. .+++..+++....+. .| .+++.|++.+|+|+|+.+. .....++.. +.|..+. -+++
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~-~~~~~~~--~~~~ 123 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEED-GCGVLVA--NDPE 123 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE-T--T-HH
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheeec-CCeEEEC--CCHH
Confidence 569999999964 448889999444332 22 4899999999999999765 233445553 7887773 4899
Q ss_pred HHHHHHHHHhcC
Q 013342 395 VVEKAVRRLMVG 406 (445)
Q Consensus 395 ~l~~ai~~ll~~ 406 (445)
++.++|.++++|
T Consensus 124 ~l~~~i~~l~~d 135 (135)
T PF13692_consen 124 ELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHHHHH-
T ss_pred HHHHHHHHHhcC
Confidence 999999999876
No 123
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.97 E-value=0.0081 Score=59.70 Aligned_cols=141 Identities=17% Similarity=0.217 Sum_probs=93.6
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHH--hcCCcEEEEeccHHH---
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEA--VQENGCIVKWAPQKE--- 332 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~pq~~--- 332 (445)
+++.+||.+|--....+|+.++.-++.|++.+-.++|..+... .|+ ..+....++. .|+++++.+-++-.+
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa-~ge---~rf~ty~~~~Gl~p~riifs~va~k~eHvr 831 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA-VGE---QRFRTYAEQLGLEPDRIIFSPVAAKEEHVR 831 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccc-cch---HHHHHHHHHhCCCccceeeccccchHHHHH
Confidence 5667999999999889999999999999999999999986542 111 0111111111 246677766665444
Q ss_pred --HhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhH-HHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 333 --VLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNA-RYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 333 --lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na-~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.|....+....| .|+.|.++.|+.|||||.+|...--...| ..+.. +|+|-.+.+ +.++-.+.-.++-+|
T Consensus 832 r~~LaDv~LDTplc-nGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-~Gl~hliak--~~eEY~~iaV~Latd 904 (966)
T KOG4626|consen 832 RGQLADVCLDTPLC-NGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-LGLGHLIAK--NREEYVQIAVRLATD 904 (966)
T ss_pred hhhhhhhcccCcCc-CCcccchhhhccCCceeecccHHHHHHHHHHHHHH-cccHHHHhh--hHHHHHHHHHHhhcC
Confidence 333333333555 57899999999999999999754333333 44455 699976654 445555444466666
No 124
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=96.59 E-value=0.03 Score=56.61 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=77.0
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHh---CCCCEEEEECCCCCCCCCccCCchHH---HHHHhcCCcEEEEeccHH--
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVN---SKQPFLWVIRPSSNNAPEGIDLLPEV---LAEAVQENGCIVKWAPQK-- 331 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~n~~~~~~~pq~-- 331 (445)
+..+++..|.+.. .+....+++++.+ .+.+++++- .+. ....+. +.+..+.++.+....+..
T Consensus 290 ~~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~lvi~G-~g~-------~~~~~~l~~~~~~~~~~v~~~~~~~~~~~ 359 (473)
T TIGR02095 290 DVPLFGVISRLTQ--QKGVDLLLAALPELLELGGQLVVLG-TGD-------PELEEALRELAERYPGNVRVIIGYDEALA 359 (473)
T ss_pred CCCEEEEEecCcc--ccChHHHHHHHHHHHHcCcEEEEEC-CCC-------HHHHHHHHHHHHHCCCcEEEEEcCCHHHH
Confidence 4466677787763 3344555555544 344554442 210 011122 223345666666555654
Q ss_pred -HHhhccccCceeec---cCch-hHHHHHhhCCCcccCCcccchhhhHHHHHhhh------eeeeEeCcccCHHHHHHHH
Q 013342 332 -EVLSHVAVGGFWSH---CGWN-STLECLCEGVPMICRPCFGDQRVNARYVSHVW------RTGLELENELEREVVEKAV 400 (445)
Q Consensus 332 -~lL~~~~~~~~I~H---gG~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~------G~g~~~~~~~t~~~l~~ai 400 (445)
.++..+|+ ++.- -|.| +.+||+++|+|+|+....+ ....+.+ - +.|..++. -++++++++|
T Consensus 360 ~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~-~~~~~~~~~G~l~~~-~d~~~la~~i 431 (473)
T TIGR02095 360 HLIYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVD-GDPEAESGTGFLFEE-YDPGALLAAL 431 (473)
T ss_pred HHHHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEec-CCCCCCCCceEEeCC-CCHHHHHHHH
Confidence 37888898 6643 2444 7889999999999876532 2223333 2 67877764 5789999999
Q ss_pred HHHhc
Q 013342 401 RRLMV 405 (445)
Q Consensus 401 ~~ll~ 405 (445)
.+++.
T Consensus 432 ~~~l~ 436 (473)
T TIGR02095 432 SRALR 436 (473)
T ss_pred HHHHH
Confidence 99987
No 125
>PRK14098 glycogen synthase; Provisional
Probab=96.51 E-value=0.037 Score=56.04 Aligned_cols=133 Identities=8% Similarity=0.011 Sum_probs=78.1
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCc-cCCchHHHHHHhcCCcEEEEeccHH---H
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEG-IDLLPEVLAEAVQENGCIVKWAPQK---E 332 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~pq~---~ 332 (445)
+.+++...|.+.. .+.+..+++++.++ +.++++. +.+. .. ...+ ..+.+..++++.+..+++.. .
T Consensus 306 ~~~~i~~vgRl~~--~KG~d~li~a~~~l~~~~~~lviv-G~G~----~~~~~~l-~~l~~~~~~~V~~~g~~~~~~~~~ 377 (489)
T PRK14098 306 ETPLVGVIINFDD--FQGAELLAESLEKLVELDIQLVIC-GSGD----KEYEKRF-QDFAEEHPEQVSVQTEFTDAFFHL 377 (489)
T ss_pred CCCEEEEeccccc--cCcHHHHHHHHHHHHhcCcEEEEE-eCCC----HHHHHHH-HHHHHHCCCCEEEEEecCHHHHHH
Confidence 3456667776653 34455555555443 4444443 2220 00 0011 12233456788888888875 4
Q ss_pred HhhccccCceeecc---Cc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHh
Q 013342 333 VLSHVAVGGFWSHC---GW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLM 404 (445)
Q Consensus 333 lL~~~~~~~~I~Hg---G~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll 404 (445)
+++.+|+ ++.-+ |. .+.+||+++|+|.|+....+-........++. +.|...+. -+++++.++|.+++
T Consensus 378 ~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~-~~G~l~~~-~d~~~la~ai~~~l 449 (489)
T PRK14098 378 AIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDK-GSGFIFHD-YTPEALVAKLGEAL 449 (489)
T ss_pred HHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCC-CceeEeCC-CCHHHHHHHHHHHH
Confidence 8889998 77533 22 27789999999988876643211111112233 67877764 67899999999876
No 126
>PHA01633 putative glycosyl transferase group 1
Probab=96.49 E-value=0.043 Score=52.30 Aligned_cols=129 Identities=11% Similarity=0.114 Sum_probs=76.1
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCCC-------CEEEEECCCCCCCCCccCCchHHHHH-HhcCCcEEE---Eec
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSKQ-------PFLWVIRPSSNNAPEGIDLLPEVLAE-AVQENGCIV---KWA 328 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~n~~~~---~~~ 328 (445)
+.++++..|.+. ..+....+++|++.+.. ++.+.+.+. ..+.+ ..++++.+. +++
T Consensus 147 ~~~~i~~vGRl~--~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~------------~~~~~l~l~~~V~f~g~~G~~ 212 (335)
T PHA01633 147 DTIKFGIVSGLT--KRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH------------KQFTQLEVPANVHFVAEFGHN 212 (335)
T ss_pred CCeEEEEEeCCc--cccCHHHHHHHHHHHHHhCCCccccEEEEEEcH------------HHHHHcCCCCcEEEEecCCCC
Confidence 445666667664 44556667777655321 222222111 11111 245778887 455
Q ss_pred cHH---HHhhccccCceeec---cCc-hhHHHHHhhCCCcccCCc------ccch------hhhHHHHH--hhheeeeEe
Q 013342 329 PQK---EVLSHVAVGGFWSH---CGW-NSTLECLCEGVPMICRPC------FGDQ------RVNARYVS--HVWRTGLEL 387 (445)
Q Consensus 329 pq~---~lL~~~~~~~~I~H---gG~-gsv~eal~~GvP~v~~P~------~~DQ------~~na~~v~--~~~G~g~~~ 387 (445)
++. +++..+|+ +|.- =|+ .+++||+++|+|+|+--. .+|+ ........ .. |.|...
T Consensus 213 ~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~-g~g~~~ 289 (335)
T PHA01633 213 SREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEH-GQKWKI 289 (335)
T ss_pred CHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCccc-Cceeee
Confidence 654 47888888 7753 244 478899999999998633 2333 22222222 33 677666
Q ss_pred CcccCHHHHHHHHHHHhcC
Q 013342 388 ENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 388 ~~~~t~~~l~~ai~~ll~~ 406 (445)
+ ..++++++++|.+++..
T Consensus 290 ~-~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 290 H-KFQIEDMANAIILAFEL 307 (335)
T ss_pred c-CCCHHHHHHHHHHHHhc
Confidence 6 48999999999999543
No 127
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.36 E-value=0.075 Score=53.69 Aligned_cols=74 Identities=23% Similarity=0.228 Sum_probs=52.6
Q ss_pred cCCcEEEEeccH-HHHhhccccCceeec---cC-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCH
Q 013342 319 QENGCIVKWAPQ-KEVLSHVAVGGFWSH---CG-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELER 393 (445)
Q Consensus 319 ~~n~~~~~~~pq-~~lL~~~~~~~~I~H---gG-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~ 393 (445)
.+++.+.+|..+ ..+|..+|+ +|.. -| -+++.||+++|+|+|+... ..+...+.+. ..|..++. -+.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV~dG-~nG~LVp~-~D~ 525 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECFIEG-VSGFILDD-AQT 525 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHcccC-CcEEEECC-CCh
Confidence 477888888654 448999998 8753 34 4599999999999998754 3556777774 77877765 344
Q ss_pred HHHHHHH
Q 013342 394 EVVEKAV 400 (445)
Q Consensus 394 ~~l~~ai 400 (445)
+.+.+++
T Consensus 526 ~aLa~ai 532 (578)
T PRK15490 526 VNLDQAC 532 (578)
T ss_pred hhHHHHH
Confidence 5555544
No 128
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.29 E-value=0.13 Score=50.82 Aligned_cols=177 Identities=11% Similarity=0.132 Sum_probs=103.0
Q ss_pred chhhccCCCCceEEEEecccccC------Ch----hhHHHHHHHHHhCCCCEEEEECCCCCC--CCCccCCchHHHHHHh
Q 013342 251 ISWLNNQAPESVIYVSLGSVASM------DK----KEPEEMAWGLVNSKQPFLWVIRPSSNN--APEGIDLLPEVLAEAV 318 (445)
Q Consensus 251 ~~wl~~~~~~~~v~vs~Gs~~~~------~~----~~~~~~~~al~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~ 318 (445)
..|+....++++|-+|.-..... .. +.+.++++.+.+.+.++++..-..... +.++ ......+.+.+
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD-~~~~~~l~~~~ 303 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDD-RMVALNLRQHV 303 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCch-HHHHHHHHHhc
Confidence 34554334456777776543311 11 223345555555688877664211100 0000 00112233333
Q ss_pred c--CCcEEE--EeccHH--HHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeE-eCc-c
Q 013342 319 Q--ENGCIV--KWAPQK--EVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLE-LEN-E 390 (445)
Q Consensus 319 ~--~n~~~~--~~~pq~--~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~-~~~-~ 390 (445)
+ .+..++ ++-|.+ .++++|++ +|. .=+=+..-|+..|||.+.+++ | +.....++. +|..-. .+. +
T Consensus 304 ~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig-~RlHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~-lg~~~~~~~~~~ 376 (426)
T PRK10017 304 SDPARYHVVMDELNDLEMGKILGACEL--TVG-TRLHSAIISMNFGTPAIAINY--E-HKSAGIMQQ-LGLPEMAIDIRH 376 (426)
T ss_pred ccccceeEecCCCChHHHHHHHhhCCE--EEE-ecchHHHHHHHcCCCEEEeee--h-HHHHHHHHH-cCCccEEechhh
Confidence 3 233443 333443 68999997 875 344456678899999999988 3 455555577 688755 444 7
Q ss_pred cCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 391 LEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 391 ~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
++.++|.+.+.++++|. +.+++..++--++++.. ..+.+.++++.
T Consensus 377 l~~~~Li~~v~~~~~~r--~~~~~~l~~~v~~~r~~------~~~~~~~~~~~ 421 (426)
T PRK10017 377 LLDGSLQAMVADTLGQL--PALNARLAEAVSRERQT------GMQMVQSVLER 421 (426)
T ss_pred CCHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 89999999999999985 56777766666666653 33555666554
No 129
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=96.28 E-value=0.0054 Score=46.78 Aligned_cols=52 Identities=13% Similarity=0.180 Sum_probs=43.1
Q ss_pred chhchhhccCCCCceEEEEecccccC---C--hhhHHHHHHHHHhCCCCEEEEECCC
Q 013342 248 TSCISWLNNQAPESVIYVSLGSVASM---D--KKEPEEMAWGLVNSKQPFLWVIRPS 299 (445)
Q Consensus 248 ~~l~~wl~~~~~~~~v~vs~Gs~~~~---~--~~~~~~~~~al~~~~~~~v~~~~~~ 299 (445)
..+..|+...++++.|++|+||.... . ...+..+++++..++..+|..+...
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 34677998788999999999998873 2 2478889999999999999998654
No 130
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=96.21 E-value=0.14 Score=51.21 Aligned_cols=102 Identities=17% Similarity=0.186 Sum_probs=72.1
Q ss_pred EeccHHH---HhhccccCceeec---cCch-hHHHHHhhCCC----cccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 326 KWAPQKE---VLSHVAVGGFWSH---CGWN-STLECLCEGVP----MICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 326 ~~~pq~~---lL~~~~~~~~I~H---gG~g-sv~eal~~GvP----~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
+.+++.+ ++..+|+ ++.- =|+| ++.|++++|+| +|+--+.+- +.. ++-|+.+++ -+.+
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~----l~~gllVnP-~d~~ 410 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQE----LNGALLVNP-YDID 410 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHH----hCCcEEECC-CCHH
Confidence 4566765 5788888 6653 3655 77899999999 555544332 222 234666665 6789
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 395 VVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 395 ~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
++++||.++|+++. +.-+++.+++.+.+.+. +..+-++++++++
T Consensus 411 ~lA~aI~~aL~~~~-~er~~r~~~~~~~v~~~-----~~~~W~~~~l~~l 454 (456)
T TIGR02400 411 GMADAIARALTMPL-EEREERHRAMMDKLRKN-----DVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHHHHcCCH-HHHHHHHHHHHHHHhhC-----CHHHHHHHHHHHh
Confidence 99999999998643 45667777777777764 8888899988875
No 131
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=96.05 E-value=0.055 Score=40.84 Aligned_cols=83 Identities=18% Similarity=0.181 Sum_probs=55.7
Q ss_pred ccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhhe-eeeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 013342 345 HCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWR-TGLELENELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEI 423 (445)
Q Consensus 345 HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~ 423 (445)
+|-...+.|++++|+|+|.-.. ......+.. | -++..+ +.+++.++|..+++|+ +..++-+++-.+.+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~~---~~~el~~~i~~ll~~~--~~~~~ia~~a~~~v 77 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITYN---DPEELAEKIEYLLENP--EERRRIAKNARERV 77 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEEC---CHHHHHHHHHHHHCCH--HHHHHHHHHHHHHH
Confidence 4556789999999999998755 444444433 4 444443 8999999999999994 23444444444444
Q ss_pred HHHHhcCCChHHHHHHHHH
Q 013342 424 ELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 424 ~~~~~~~g~~~~~~~~~~~ 442 (445)
++ .=+....++++++
T Consensus 78 ~~----~~t~~~~~~~il~ 92 (92)
T PF13524_consen 78 LK----RHTWEHRAEQILE 92 (92)
T ss_pred HH----hCCHHHHHHHHHC
Confidence 43 3677777777753
No 132
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=95.86 E-value=0.13 Score=51.14 Aligned_cols=105 Identities=14% Similarity=0.155 Sum_probs=78.0
Q ss_pred CCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHH------hcCCcEEEEeccH
Q 013342 257 QAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEA------VQENGCIVKWAPQ 330 (445)
Q Consensus 257 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~n~~~~~~~pq 330 (445)
-+++.+||+||+......++.+..-++-++..+-.++|...++.. ......+++. .++++++.+-.|.
T Consensus 426 lp~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~------~~~~~~l~~la~~~Gv~~eRL~f~p~~~~ 499 (620)
T COG3914 426 LPEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDD------AEINARLRDLAEREGVDSERLRFLPPAPN 499 (620)
T ss_pred CCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCc------HHHHHHHHHHHHHcCCChhheeecCCCCC
Confidence 367789999999999999999999999999999999999865411 1222333222 2366777777665
Q ss_pred H---HHhhccccCceee---ccCchhHHHHHhhCCCcccCCcccchh
Q 013342 331 K---EVLSHVAVGGFWS---HCGWNSTLECLCEGVPMICRPCFGDQR 371 (445)
Q Consensus 331 ~---~lL~~~~~~~~I~---HgG~gsv~eal~~GvP~v~~P~~~DQ~ 371 (445)
. +-+.-+|+ |.- =||+.|..|+|..|||+|..+ ++|+
T Consensus 500 ~~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~F 542 (620)
T COG3914 500 EDHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQF 542 (620)
T ss_pred HHHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHH
Confidence 4 45556776 664 489999999999999999875 5554
No 133
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=95.63 E-value=0.92 Score=43.11 Aligned_cols=131 Identities=14% Similarity=0.106 Sum_probs=75.6
Q ss_pred CCceEEEEeccccc---CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEe--ccH-HH
Q 013342 259 PESVIYVSLGSVAS---MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKW--APQ-KE 332 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~--~pq-~~ 332 (445)
+++.|.+..|+... .+.+.+.++++.+.+.+.++++..++.. + ...-..+.+..+. ..+.+- +++ .+
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~----e--~~~~~~i~~~~~~-~~l~g~~sL~el~a 250 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA----E--KQRAERIAEALPG-AVVLPKMSLAEVAA 250 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH----H--HHHHHHHHhhCCC-CeecCCCCHHHHHH
Confidence 45566666664322 5667788888888766777766543220 0 0111222222222 233332 334 44
Q ss_pred HhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheee---eEeC-c-ccCHHHHHHHHHHHh
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTG---LELE-N-ELEREVVEKAVRRLM 404 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g---~~~~-~-~~t~~~l~~ai~~ll 404 (445)
++.+|++ +|+ +-.|.++=|...|+|+|++ ++ +....+..= +|-. +.-. . .++++++.+|++++|
T Consensus 251 li~~a~l--~I~-~DSgp~HlAaa~g~P~i~l--fg--~t~p~~~~P-~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 251 LLAGADA--VVG-VDTGLTHLAAALDKPTVTL--YG--ATDPGRTGG-YGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHHcCCE--EEe-CCChHHHHHHHcCCCEEEE--EC--CCCHhhccc-CCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 8999998 997 6788999999999999986 11 112222211 1221 1111 2 799999999998875
No 134
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=95.62 E-value=0.097 Score=42.82 Aligned_cols=100 Identities=11% Similarity=0.096 Sum_probs=60.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcchH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVSTGINILITNLLNVNCQAP 80 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (445)
|++++.-...| ...+++.|.++||+|++++............++.+..++-... ..+. .+ . .. .
T Consensus 2 Il~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~~~i~~~~~~~~~k--------~~~~--~~-~-~~-~ 65 (139)
T PF13477_consen 2 ILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEIIEGIKVIRLPSPRK--------SPLN--YI-K-YF-R 65 (139)
T ss_pred EEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhHhCCeEEEEecCCCC--------ccHH--HH-H-HH-H
Confidence 34555544445 5678999999999999999954443433456888888853211 1111 11 1 11 2
Q ss_pred HHHHHHHHHhhccCCCCCCCCceEEEEcCCCC---chHHHHHHhC-CceEEE
Q 013342 81 FFECMVRMMEQQQQHPAGDDQIACIIYDEIFY---FPEAAANQLN-LQSIIL 128 (445)
Q Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~---~~~~~A~~~g-iP~v~~ 128 (445)
+..++.+. +||+|.+-.... .+..++...+ +|.+..
T Consensus 66 l~k~ik~~------------~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 66 LRKIIKKE------------KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred HHHHhccC------------CCCEEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 22233332 999998776543 2444667788 898863
No 135
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=95.61 E-value=0.19 Score=50.58 Aligned_cols=103 Identities=21% Similarity=0.236 Sum_probs=68.0
Q ss_pred EEeccHHH---HhhccccCceee---ccCch-hHHHHHhhCCC----cccCCcccchhhhHHHHHhhheeeeEeCcccCH
Q 013342 325 VKWAPQKE---VLSHVAVGGFWS---HCGWN-STLECLCEGVP----MICRPCFGDQRVNARYVSHVWRTGLELENELER 393 (445)
Q Consensus 325 ~~~~pq~~---lL~~~~~~~~I~---HgG~g-sv~eal~~GvP----~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~ 393 (445)
.+++++.+ ++..+|+ +|. +-|+| ++.||+++|+| +|+--..+ .+.. . .-|+.+++ -+.
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G----~~~~---~-~~g~lv~p-~d~ 414 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG----AAEE---L-SGALLVNP-YDI 414 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc----chhh---c-CCCEEECC-CCH
Confidence 46778766 6888888 663 34655 67899999999 44432221 1111 1 33556654 578
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 394 EVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 394 ~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
++++++|.++++++. +..++..++..+.+++. +..+-++++++++
T Consensus 415 ~~la~ai~~~l~~~~-~e~~~~~~~~~~~v~~~-----~~~~w~~~~l~~l 459 (460)
T cd03788 415 DEVADAIHRALTMPL-EERRERHRKLREYVRTH-----DVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHhC-----CHHHHHHHHHHhh
Confidence 999999999998742 23445555556666654 8888889988876
No 136
>PHA01630 putative group 1 glycosyl transferase
Probab=94.56 E-value=1.3 Score=42.50 Aligned_cols=76 Identities=9% Similarity=0.180 Sum_probs=47.3
Q ss_pred EeccHHH---HhhccccCceee--c-cC-chhHHHHHhhCCCcccCCccc--chhh---hHHHHHh-----------hhe
Q 013342 326 KWAPQKE---VLSHVAVGGFWS--H-CG-WNSTLECLCEGVPMICRPCFG--DQRV---NARYVSH-----------VWR 382 (445)
Q Consensus 326 ~~~pq~~---lL~~~~~~~~I~--H-gG-~gsv~eal~~GvP~v~~P~~~--DQ~~---na~~v~~-----------~~G 382 (445)
.++|+.+ ++..+|+ ++. + .| -.++.||+++|+|+|+.-..+ |.-. |+..++. . +
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~-~ 272 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPI-H 272 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCc-c
Confidence 4477655 6888998 653 2 33 458999999999999986543 2211 1111110 1 2
Q ss_pred eeeEeCcccCHHHHHHHHHHHhcC
Q 013342 383 TGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 383 ~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
+|..++ .+.+++.+++.+++.|
T Consensus 273 ~G~~v~--~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 273 VGYFLD--PDIEDAYQKLLEALAN 294 (331)
T ss_pred cccccC--CCHHHHHHHHHHHHhC
Confidence 444443 3678888888888886
No 137
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=94.54 E-value=0.48 Score=40.31 Aligned_cols=94 Identities=10% Similarity=-0.020 Sum_probs=55.7
Q ss_pred hCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCCCh-hHHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCc
Q 013342 24 SNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVSTGI-NILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQI 102 (445)
Q Consensus 24 ~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 102 (445)
++||+|+++|........ +|++...+...........-+ .-++ ...... ..+.+.+.+|.++. . .|
T Consensus 1 q~gh~v~fl~~~~~~~~~---~GV~~~~y~~~~~~~~~~~~~~~~~e--~~~~rg-~av~~a~~~L~~~G------f-~P 67 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP---PGVRVVRYRPPRGPTPGTHPYVRDFE--AAVLRG-QAVARAARQLRAQG------F-VP 67 (171)
T ss_pred CCCCEEEEEecCCCCCCC---CCcEEEEeCCCCCCCCCCCcccccHH--HHHHHH-HHHHHHHHHHHHcC------C-CC
Confidence 479999999953333332 588888877421111110011 2222 111111 22233566666653 3 89
Q ss_pred eEEEEcCCCCchHHHHHHh-CCceEEEcc
Q 013342 103 ACIIYDEIFYFPEAAANQL-NLQSIILRT 130 (445)
Q Consensus 103 D~vv~D~~~~~~~~~A~~~-giP~v~~~~ 130 (445)
|+|+.......++.+-+.+ ++|.+.++-
T Consensus 68 DvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 68 DVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred CEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 9999998777788888888 899998654
No 138
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=94.53 E-value=0.039 Score=45.93 Aligned_cols=94 Identities=13% Similarity=0.130 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCCC-CCCCCceEEEcCCCCCCCCCCCCh-hHHHHHHHHHhcchHHHHHHHHHHhh
Q 013342 14 PMLQLGTILYSNGFSITVVHTHFNPPNP-SNHPEFNFQSIPDGLTADDVSTGI-NILITNLLNVNCQAPFFECMVRMMEQ 91 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 91 (445)
-+..|+++|.++||+|++++........ ....++.+..++-..... .... ..+. .+ .+++ ...
T Consensus 6 ~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~--------~~~l---~~~ 70 (160)
T PF13579_consen 6 YVRELARALAARGHEVTVVTPQPDPEDDEEEEDGVRVHRLPLPRRPW--PLRLLRFLR--RL--------RRLL---AAR 70 (160)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE---GGG-SEEETTEEEEEE--S-SSS--GGGHCCHHH--HH--------HHHC---HHC
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCcccccccCCceEEeccCCccch--hhhhHHHHH--HH--------HHHH---hhh
Confidence 4678999999999999999975433321 234578887776221111 0011 1111 11 2222 111
Q ss_pred ccCCCCCCCCceEEEEcCCC-CchHHHHH-HhCCceEEEc
Q 013342 92 QQQHPAGDDQIACIIYDEIF-YFPEAAAN-QLNLQSIILR 129 (445)
Q Consensus 92 ~~~~~~~~~~~D~vv~D~~~-~~~~~~A~-~~giP~v~~~ 129 (445)
. . +||+|.+.... .....+++ ..++|+|...
T Consensus 71 ~------~-~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 103 (160)
T PF13579_consen 71 R------E-RPDVVHAHSPTAGLVAALARRRRGIPLVVTV 103 (160)
T ss_dssp T----------SEEEEEHHHHHHHHHHHHHHHT--EEEE-
T ss_pred c------c-CCeEEEecccchhHHHHHHHHccCCcEEEEE
Confidence 1 2 99999987643 22333444 7899999844
No 139
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=94.15 E-value=1.1 Score=42.38 Aligned_cols=58 Identities=12% Similarity=0.041 Sum_probs=41.1
Q ss_pred cHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhH---HHHHhhheeeeEeC
Q 013342 329 PQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNA---RYVSHVWRTGLELE 388 (445)
Q Consensus 329 pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na---~~v~~~~G~g~~~~ 388 (445)
|+...|..++. .+||-=..+.+.||+..|+|+.+++...-..... +.+++ .|+-....
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~-~g~~r~~~ 281 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEE-RGAVRPFT 281 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHH-CCCEEECC
Confidence 67789999987 5666666889999999999999999987222233 33444 25554443
No 140
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.14 E-value=0.21 Score=45.74 Aligned_cols=110 Identities=18% Similarity=0.142 Sum_probs=70.2
Q ss_pred CCcEEE-EeccHHHHhhccccCceeeccCchhHHHH-HhhCCCcccCCcccchh--hhHHHHHhhheeeeEeCcccCHHH
Q 013342 320 ENGCIV-KWAPQKEVLSHVAVGGFWSHCGWNSTLEC-LCEGVPMICRPCFGDQR--VNARYVSHVWRTGLELENELEREV 395 (445)
Q Consensus 320 ~n~~~~-~~~pq~~lL~~~~~~~~I~HgG~gsv~ea-l~~GvP~v~~P~~~DQ~--~na~~v~~~~G~g~~~~~~~t~~~ 395 (445)
+|..+. .|-...++|.++++ .| |=+||..|. +-.|||+|.+|-.+-|+ ..|.|=.+-+|+.+.+-. ..+..
T Consensus 294 dnc~l~lsqqsfadiLH~ada--al--gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-~~aq~ 368 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--AL--GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-PEAQA 368 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HH--HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-Cchhh
Confidence 454443 55555667766666 44 235565554 66899999999999995 556666665688887754 23333
Q ss_pred HHHHHHHHhcCCcHHHHHHHHH-HHHHHHHHHHhcCCChHHHHHHHH
Q 013342 396 VEKAVRRLMVGEEGEEMRQRAK-NLKEEIELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 396 l~~ai~~ll~~~~~~~~~~~a~-~l~~~~~~~~~~~g~~~~~~~~~~ 441 (445)
-..+.+++|.| +.+.++++ .=.+++-+. |...+.+|++-
T Consensus 369 a~~~~q~ll~d---p~r~~air~nGqrRiGqa----Gaa~rIAe~l~ 408 (412)
T COG4370 369 AAQAVQELLGD---PQRLTAIRHNGQRRIGQA----GAARRIAEELG 408 (412)
T ss_pred HHHHHHHHhcC---hHHHHHHHhcchhhccCc----chHHHHHHHHH
Confidence 44455559999 77777776 445566665 65555555443
No 141
>PLN02939 transferase, transferring glycosyl groups
Probab=93.63 E-value=2.1 Score=46.29 Aligned_cols=134 Identities=12% Similarity=0.110 Sum_probs=75.7
Q ss_pred eEEEEecccccCChhhHHHHHHHHHh---CCCCEEEEECCCCCCCCCccCCchHHHHHHh--cCCcEEEEeccHH---HH
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVN---SKQPFLWVIRPSSNNAPEGIDLLPEVLAEAV--QENGCIVKWAPQK---EV 333 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~pq~---~l 333 (445)
+++...|.+. ..+.+..+++|+.. .+.+++++ +.+.... ....+ ..+.+.. .+++.+..+.+.. .+
T Consensus 780 pLIg~VGRL~--~QKGiDlLleA~~~Ll~~dvqLVIv-GdGp~~~--~e~eL-~~La~~l~l~drV~FlG~~de~lah~I 853 (977)
T PLN02939 780 PLVGCITRLV--PQKGVHLIRHAIYKTAELGGQFVLL-GSSPVPH--IQREF-EGIADQFQSNNNIRLILKYDEALSHSI 853 (977)
T ss_pred eEEEEeecCC--cccChHHHHHHHHHHhhcCCEEEEE-eCCCcHH--HHHHH-HHHHHHcCCCCeEEEEeccCHHHHHHH
Confidence 4556666555 34455566666644 34455444 3221000 00001 1222233 3578888888764 48
Q ss_pred hhccccCceeecc---C-chhHHHHHhhCCCcccCCccc--chhhh--HHHH-HhhheeeeEeCcccCHHHHHHHHHHHh
Q 013342 334 LSHVAVGGFWSHC---G-WNSTLECLCEGVPMICRPCFG--DQRVN--ARYV-SHVWRTGLELENELEREVVEKAVRRLM 404 (445)
Q Consensus 334 L~~~~~~~~I~Hg---G-~gsv~eal~~GvP~v~~P~~~--DQ~~n--a~~v-~~~~G~g~~~~~~~t~~~l~~ai~~ll 404 (445)
+..+|+ ||.-. | -.+++||+++|+|.|+....+ |--.. ...+ +.. +.|...+. -+++.+.++|.+++
T Consensus 854 YAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg-~NGfLf~~-~D~eaLa~AL~rAL 929 (977)
T PLN02939 854 YAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVEL-RNGFTFLT-PDEQGLNSALERAF 929 (977)
T ss_pred HHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCC-CceEEecC-CCHHHHHHHHHHHH
Confidence 999998 87532 2 247899999999999876644 21110 1111 222 56766654 58889999998877
Q ss_pred c
Q 013342 405 V 405 (445)
Q Consensus 405 ~ 405 (445)
.
T Consensus 930 ~ 930 (977)
T PLN02939 930 N 930 (977)
T ss_pred H
Confidence 5
No 142
>PRK14099 glycogen synthase; Provisional
Probab=93.38 E-value=1.3 Score=44.86 Aligned_cols=131 Identities=14% Similarity=0.158 Sum_probs=68.2
Q ss_pred eEEEEecccccCChhhHHHHHHHHHh---CCCCEEEEECCCCCCCCCccCCchHHH---HHHhcCCc-EEEEeccHHH-H
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVN---SKQPFLWVIRPSSNNAPEGIDLLPEVL---AEAVQENG-CIVKWAPQKE-V 333 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~n~-~~~~~~pq~~-l 333 (445)
+++...|... ..+.+..+++++.. .+.+++++-.+. +.+.+.+ .+..++++ .+.+|-.... +
T Consensus 296 ~li~~VgRL~--~~KG~d~Li~A~~~l~~~~~~lvivG~G~--------~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~ 365 (485)
T PRK14099 296 LLLGVISRLS--WQKGLDLLLEALPTLLGEGAQLALLGSGD--------AELEARFRAAAQAYPGQIGVVIGYDEALAHL 365 (485)
T ss_pred cEEEEEecCC--ccccHHHHHHHHHHHHhcCcEEEEEecCC--------HHHHHHHHHHHHHCCCCEEEEeCCCHHHHHH
Confidence 4444556554 34445556666654 344554443211 0111222 22234454 4556633322 3
Q ss_pred h-hccccCceee---ccCch-hHHHHHhhCCCcccCCccc--chhhhHHHH---HhhheeeeEeCcccCHHHHHHHHHH-
Q 013342 334 L-SHVAVGGFWS---HCGWN-STLECLCEGVPMICRPCFG--DQRVNARYV---SHVWRTGLELENELEREVVEKAVRR- 402 (445)
Q Consensus 334 L-~~~~~~~~I~---HgG~g-sv~eal~~GvP~v~~P~~~--DQ~~na~~v---~~~~G~g~~~~~~~t~~~l~~ai~~- 402 (445)
+ ..+|+ ++. +=|.| +.+||+++|+|.|+....+ |--...... +.. +.|...+. -++++|+++|.+
T Consensus 366 ~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~-~~G~l~~~-~d~~~La~ai~~a 441 (485)
T PRK14099 366 IQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGV-ATGVQFSP-VTADALAAALRKT 441 (485)
T ss_pred HHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCC-CceEEeCC-CCHHHHHHHHHHH
Confidence 3 35777 774 34444 6789999998777654422 211111000 111 46777765 578999999987
Q ss_pred --HhcC
Q 013342 403 --LMVG 406 (445)
Q Consensus 403 --ll~~ 406 (445)
+++|
T Consensus 442 ~~l~~d 447 (485)
T PRK14099 442 AALFAD 447 (485)
T ss_pred HHHhcC
Confidence 6667
No 143
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=93.13 E-value=1.2 Score=37.45 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=24.0
Q ss_pred CccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 8 FQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 8 ~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
..|=-.-+..|+++|+++||+|++++.......
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~ 43 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGVKDPI 43 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccc
Confidence 445556789999999999999999988544433
No 144
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=92.72 E-value=1.6 Score=46.92 Aligned_cols=102 Identities=13% Similarity=0.108 Sum_probs=68.5
Q ss_pred eccHH---HHhhccccCceeec---cCch-hHHHHHhhCCC---cccCCcccchhhhHHHHHhhhe-eeeEeCcccCHHH
Q 013342 327 WAPQK---EVLSHVAVGGFWSH---CGWN-STLECLCEGVP---MICRPCFGDQRVNARYVSHVWR-TGLELENELEREV 395 (445)
Q Consensus 327 ~~pq~---~lL~~~~~~~~I~H---gG~g-sv~eal~~GvP---~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~t~~~ 395 (445)
++|.. +++..+++ ++.- -|+| ++.|++++|+| ++++. +--..+.. +| -|+.+++ .+.++
T Consensus 363 ~v~~~el~aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlS---e~~G~~~~----l~~~allVnP-~D~~~ 432 (797)
T PLN03063 363 SVDFNYLCALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLS---EFAGAGQS----LGAGALLVNP-WNITE 432 (797)
T ss_pred CCCHHHHHHHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEee---CCcCchhh----hcCCeEEECC-CCHHH
Confidence 44544 47888888 6644 3877 66799999999 44443 22222222 23 4777776 68899
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 396 VEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 396 l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+++||.++|+.+. +.-+++.+++.+.+++. +..+-+++|++++
T Consensus 433 lA~AI~~aL~m~~-~er~~r~~~~~~~v~~~-----~~~~Wa~~fl~~l 475 (797)
T PLN03063 433 VSSAIKEALNMSD-EERETRHRHNFQYVKTH-----SAQKWADDFMSEL 475 (797)
T ss_pred HHHHHHHHHhCCH-HHHHHHHHHHHHhhhhC-----CHHHHHHHHHHHH
Confidence 9999999999321 34556677777777765 6777777777654
No 145
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=92.13 E-value=7.2 Score=37.52 Aligned_cols=101 Identities=14% Similarity=0.080 Sum_probs=64.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCceEE-EcCCCCCCCCCCCChhHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN--GFSITVVHTHFNPPNPSNHPEFNFQ-SIPDGLTADDVSTGINILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (445)
||++-..+.|++.=..++.+.|+++ +.+|++++.+.........+.++-+ .++.. .. . . .+
T Consensus 3 ILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~P~vd~vi~~~~~--~~-----~---~--~~---- 66 (348)
T PRK10916 3 ILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--HG-----A---L--EI---- 66 (348)
T ss_pred EEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhcCCccCEEEecccc--cc-----h---h--hh----
Confidence 6888899999999999999999996 8999999986555554445555432 22211 00 0 0 00
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEE
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSII 127 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~ 127 (445)
....+++..+.+. ++|++|.=....-...++...|+|.-.
T Consensus 67 -~~~~~l~~~lr~~---------~yD~vidl~~~~~s~~l~~~~~~~~ri 106 (348)
T PRK10916 67 -GERRRLGHSLREK---------RYDRAYVLPNSFKSALVPFFAGIPHRT 106 (348)
T ss_pred -HHHHHHHHHHHhc---------CCCEEEECCCcHHHHHHHHHcCCCeEe
Confidence 0111234444432 899999765555555677777887665
No 146
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=91.81 E-value=13 Score=35.77 Aligned_cols=105 Identities=16% Similarity=0.140 Sum_probs=67.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCce-EEEcCCCCCCCCCCCChhHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN--GFSITVVHTHFNPPNPSNHPEFN-FQSIPDGLTADDVSTGINILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (445)
||++-..+.|++.-+.++.+.|.++ +.+|++++.+.........+.++ ++.++...... .. . .+.
T Consensus 2 ILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~~~~~----~~---~--~~~--- 69 (344)
T TIGR02201 2 ILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSENPDINALYGLDRKKAKA----GE---R--KLA--- 69 (344)
T ss_pred EEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhcCCCccEEEEeChhhhcc----hH---H--HHH---
Confidence 6788889999999999999999996 89999999866555444445553 34444211000 00 0 010
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEE
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIIL 128 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~ 128 (445)
.+.+++..+.+ . ++|++|.-........++...|+|.-.-
T Consensus 70 --~~~~l~~~lr~--------~-~yD~vidl~~~~~s~ll~~l~~a~~riG 109 (344)
T TIGR02201 70 --NQFHLIKVLRA--------N-RYDLVVNLTDQWMVAILVKLLNARVKIG 109 (344)
T ss_pred --HHHHHHHHHHh--------C-CCCEEEECCcchHHHHHHHhcCCCeEEe
Confidence 11123444433 2 8999997655566677888889997653
No 147
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=91.47 E-value=0.92 Score=39.91 Aligned_cols=50 Identities=18% Similarity=0.131 Sum_probs=37.8
Q ss_pred cCCcEEEEeccH-HH---HhhccccCceeeccC----chhHHHHHhhCCCcccCCcccch
Q 013342 319 QENGCIVKWAPQ-KE---VLSHVAVGGFWSHCG----WNSTLECLCEGVPMICRPCFGDQ 370 (445)
Q Consensus 319 ~~n~~~~~~~pq-~~---lL~~~~~~~~I~HgG----~gsv~eal~~GvP~v~~P~~~DQ 370 (445)
.+|+.+.++++. +. ++..+++ +++-.. .+++.||+.+|+|+|+.+..+.+
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCcc
Confidence 467888888633 22 4444888 888776 78999999999999998876543
No 148
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=90.61 E-value=14 Score=34.28 Aligned_cols=79 Identities=27% Similarity=0.368 Sum_probs=54.3
Q ss_pred CCcEEEEeccH---HHHhhccccCceeec---cCchh-HHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccC
Q 013342 320 ENGCIVKWAPQ---KEVLSHVAVGGFWSH---CGWNS-TLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELE 392 (445)
Q Consensus 320 ~n~~~~~~~pq---~~lL~~~~~~~~I~H---gG~gs-v~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t 392 (445)
+++.+.++++. ..++..+++ ++.- .|.|. +.|++++|+|+|.- +.......+... +.|. +....+
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~----~~~~~~e~~~~~-~~g~-~~~~~~ 328 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIAS----DVGGIPEVVEDG-ETGL-LVPPGD 328 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEEC----CCCChHHHhcCC-CceE-ecCCCC
Confidence 67778899883 336776776 6655 35554 59999999999665 444444444552 3466 433236
Q ss_pred HHHHHHHHHHHhcC
Q 013342 393 REVVEKAVRRLMVG 406 (445)
Q Consensus 393 ~~~l~~ai~~ll~~ 406 (445)
.+++.+++..++++
T Consensus 329 ~~~~~~~i~~~~~~ 342 (381)
T COG0438 329 VEELADALEQLLED 342 (381)
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999999998
No 149
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=88.90 E-value=12 Score=37.22 Aligned_cols=166 Identities=12% Similarity=0.115 Sum_probs=94.4
Q ss_pred cCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCCh
Q 013342 196 RTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDK 275 (445)
Q Consensus 196 ~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~ 275 (445)
.+.+.+++.|....+- ..+.+.+..+..++++|-+... +. ..+..+.++++| +.
T Consensus 238 ~~~~~iIv~T~~q~~d-i~~r~~~~~~~~~ip~g~i~~~-~~-----------------~~r~~~~~l~~t-------~s 291 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEK-IKELLDNEYQEQISQLGYLYPF-KK-----------------DNKYRKQALILT-------NS 291 (438)
T ss_pred cccCeEEeCCHHHHHH-HHHHhCcccCceEEEEEEEEee-cc-----------------ccCCcccEEEEC-------CH
Confidence 5678888888543321 1111111222346777877421 10 113444577776 24
Q ss_pred hhHHHHHHHHHhCCC-CEEEEECCCCCCCCCccCCchHHHH--HHhcCCcEEE-Eecc-H-HHHhhccccCceeeccC--
Q 013342 276 KEPEEMAWGLVNSKQ-PFLWVIRPSSNNAPEGIDLLPEVLA--EAVQENGCIV-KWAP-Q-KEVLSHVAVGGFWSHCG-- 347 (445)
Q Consensus 276 ~~~~~~~~al~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~n~~~~-~~~p-q-~~lL~~~~~~~~I~HgG-- 347 (445)
..++.+....+++|. .+=+...+ + +.+.+. +.. +|+.+. ++.+ . .+++..|++=+-|+||.
T Consensus 292 ~~I~~i~~Lv~~lPd~~f~Iga~t------e----~s~kL~~L~~y-~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~ 360 (438)
T TIGR02919 292 DQIEHLEEIVQALPDYHFHIAALT------E----MSSKLMSLDKY-DNVKLYPNITTQKIQELYQTCDIYLDINHGNEI 360 (438)
T ss_pred HHHHHHHHHHHhCCCcEEEEEecC------c----ccHHHHHHHhc-CCcEEECCcChHHHHHHHHhccEEEEccccccH
Confidence 455556665556553 22222211 1 122221 233 555554 7777 3 56999999988888876
Q ss_pred chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 348 WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 348 ~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
..++.||+.+|+|++..=...... ..+.. |-... .-+.+++.++|.++|+|
T Consensus 361 ~~al~eA~~~G~pI~afd~t~~~~---~~i~~----g~l~~-~~~~~~m~~~i~~lL~d 411 (438)
T TIGR02919 361 LNAVRRAFEYNLLILGFEETAHNR---DFIAS----ENIFE-HNEVDQLISKLKDLLND 411 (438)
T ss_pred HHHHHHHHHcCCcEEEEecccCCc---ccccC----Cceec-CCCHHHHHHHHHHHhcC
Confidence 669999999999999874432211 11111 22233 24679999999999999
No 150
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=88.58 E-value=5.6 Score=42.58 Aligned_cols=108 Identities=19% Similarity=0.175 Sum_probs=68.5
Q ss_pred EEEeccHHH---HhhccccCceeec---cCch-hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHH
Q 013342 324 IVKWAPQKE---VLSHVAVGGFWSH---CGWN-STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVV 396 (445)
Q Consensus 324 ~~~~~pq~~---lL~~~~~~~~I~H---gG~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l 396 (445)
+.+++++.+ ++..+|+ ++.- -|+| ++.|++++|+|-..+|+..+--.-+. + +.-|+.+++ -+.+++
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~---~-l~~~llv~P-~d~~~l 418 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA---E-LAEALLVNP-NDIEGI 418 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH---H-hCcCeEECC-CCHHHH
Confidence 447788775 7778888 6643 3555 77899999776333333222211121 2 233677775 578999
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 397 EKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 397 ~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+++|.++|+++. +..+++.+++.+.+++. +..+-++++++.+
T Consensus 419 a~ai~~~l~~~~-~e~~~r~~~~~~~v~~~-----~~~~w~~~~l~~l 460 (726)
T PRK14501 419 AAAIKRALEMPE-EEQRERMQAMQERLRRY-----DVHKWASDFLDEL 460 (726)
T ss_pred HHHHHHHHcCCH-HHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHH
Confidence 999999998632 34455566666666554 7777788777654
No 151
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=86.62 E-value=4 Score=34.82 Aligned_cols=110 Identities=16% Similarity=0.083 Sum_probs=56.5
Q ss_pred EcCCCccChHHHHHHHHHH-HhC-CCeEEEEeCCCCCCCC-----CC--CCCceEEEcCCCCCCCCCCCChhHHHHHHHH
Q 013342 4 VPSPFQGHMTPMLQLGTIL-YSN-GFSITVVHTHFNPPNP-----SN--HPEFNFQSIPDGLTADDVSTGINILITNLLN 74 (445)
Q Consensus 4 ~~~p~~GH~~p~l~La~~L-~~~-Gh~Vt~~~~~~~~~~~-----~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 74 (445)
+-.++-||..=++.|.+.+ .++ .++..+++.....+.. .+ .....+..++....-.. . ... ...
T Consensus 3 ~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~~~~~~~~~~~~r~r~v~q---~--~~~--~~~ 75 (170)
T PF08660_consen 3 VVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKSSSKRHKILEIPRAREVGQ---S--YLT--SIF 75 (170)
T ss_pred EEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHhccccceeeccceEEEech---h--hHh--hHH
Confidence 4457789999999999999 444 4555555553322220 00 01113444442211110 0 111 111
Q ss_pred HhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHh------CCceEEEcc
Q 013342 75 VNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQL------NLQSIILRT 130 (445)
Q Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~------giP~v~~~~ 130 (445)
......+. .+.-+.+. +||+||+..-. .+...+|..+ |.+.|-+-+
T Consensus 76 ~~l~~~~~-~~~il~r~---------rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES 129 (170)
T PF08660_consen 76 TTLRAFLQ-SLRILRRE---------RPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES 129 (170)
T ss_pred HHHHHHHH-HHHHHHHh---------CCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe
Confidence 11111111 22222221 99999999876 4455678888 888887544
No 152
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=85.66 E-value=4 Score=41.65 Aligned_cols=74 Identities=16% Similarity=0.271 Sum_probs=57.2
Q ss_pred CCcEEEEecc--H-HHHhhccccCceeecc---CchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCH
Q 013342 320 ENGCIVKWAP--Q-KEVLSHVAVGGFWSHC---GWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELER 393 (445)
Q Consensus 320 ~n~~~~~~~p--q-~~lL~~~~~~~~I~Hg---G~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~ 393 (445)
.++.+.++.. + ..++.+..+ +|.-+ |.++.+||+.+|+|+| .......|+. ..=|..+ -+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li---~d~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYII---DDI 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEe---CCH
Confidence 5677778887 3 347888887 88766 7889999999999999 3344566666 3566555 367
Q ss_pred HHHHHHHHHHhcC
Q 013342 394 EVVEKAVRRLMVG 406 (445)
Q Consensus 394 ~~l~~ai~~ll~~ 406 (445)
.+|.+||..+|++
T Consensus 476 ~~l~~al~~~L~~ 488 (519)
T TIGR03713 476 SELLKALDYYLDN 488 (519)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999998
No 153
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=85.50 E-value=5.3 Score=35.13 Aligned_cols=162 Identities=13% Similarity=0.042 Sum_probs=90.5
Q ss_pred hhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhc-CCcEEEEeccHH
Q 013342 253 WLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ-ENGCIVKWAPQK 331 (445)
Q Consensus 253 wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~~pq~ 331 (445)
|++ -.++.++.|+.|.+. ...+..|.+.+..+.++. +. +.+.+.+..+ .++.......+.
T Consensus 5 ~l~-l~~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs-~~----------~~~~l~~l~~~~~i~~~~~~~~~ 65 (202)
T PRK06718 5 MID-LSNKRVVIVGGGKVA-------GRRAITLLKYGAHIVVIS-PE----------LTENLVKLVEEGKIRWKQKEFEP 65 (202)
T ss_pred EEE-cCCCEEEEECCCHHH-------HHHHHHHHHCCCeEEEEc-CC----------CCHHHHHHHhCCCEEEEecCCCh
Confidence 444 356678889888765 445666666777665553 21 2223322223 334444444556
Q ss_pred HHhhccccCceeeccCchhHHHHHh----hCCCcccCCcccchhhh-----HHHHHhhheeeeEeCc----ccCHHHHHH
Q 013342 332 EVLSHVAVGGFWSHCGWNSTLECLC----EGVPMICRPCFGDQRVN-----ARYVSHVWRTGLELEN----ELEREVVEK 398 (445)
Q Consensus 332 ~lL~~~~~~~~I~HgG~gsv~eal~----~GvP~v~~P~~~DQ~~n-----a~~v~~~~G~g~~~~~----~~t~~~l~~ 398 (445)
.-+..+++ +|.--+.-.+++.++ .++++-+ .|.+.. -..+.+. ++-+.+.. ..-+..|++
T Consensus 66 ~~l~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g-~l~iaIsT~G~sP~la~~lr~ 138 (202)
T PRK06718 66 SDIVDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRG-KLTISVSTDGASPKLAKKIRD 138 (202)
T ss_pred hhcCCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcC-CeEEEEECCCCChHHHHHHHH
Confidence 67788888 888878777777665 3444433 344332 2334442 44444432 233466777
Q ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 013342 399 AVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 399 ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 441 (445)
.|.+++.. +...+-+.+.++++.+++.+.......+..++++
T Consensus 139 ~ie~~~~~-~~~~~~~~~~~~R~~~k~~~~~~~~R~~~~~~~~ 180 (202)
T PRK06718 139 ELEALYDE-SYESYIDFLYECRQKIKELQIEKREKQILLQEVL 180 (202)
T ss_pred HHHHHcch-hHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 78777632 2356778888888888775332233334444444
No 154
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=85.24 E-value=28 Score=35.20 Aligned_cols=107 Identities=12% Similarity=0.157 Sum_probs=73.9
Q ss_pred cEEEEeccHHH---HhhccccCceee--ccCchhHH-HHHhhCC----CcccCCcccchhhhHHHHHhhheeeeEeCccc
Q 013342 322 GCIVKWAPQKE---VLSHVAVGGFWS--HCGWNSTL-ECLCEGV----PMICRPCFGDQRVNARYVSHVWRTGLELENEL 391 (445)
Q Consensus 322 ~~~~~~~pq~~---lL~~~~~~~~I~--HgG~gsv~-eal~~Gv----P~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~ 391 (445)
.++.+.+|+.+ ++.-+|+ ++|| .-|+|-|. |.++++. |+|+=-+. -|. +. +.-++.+++ .
T Consensus 364 ~~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa-----Gaa--~~-l~~AllVNP-~ 433 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA-----GAA--VE-LKGALLTNP-Y 433 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEeccc-----cch--hh-cCCCEEECC-C
Confidence 35568888876 5667777 3443 34888554 9999877 43332221 121 44 555788876 6
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 392 EREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 392 t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+.++++++|.+.|+.+. +.=+++.++|.+.++.. +...=++.|++++
T Consensus 434 d~~~~A~ai~~AL~m~~-~Er~~R~~~l~~~v~~~-----d~~~W~~~fl~~l 480 (487)
T TIGR02398 434 DPVRMDETIYVALAMPK-AEQQARMREMFDAVNYY-----DVQRWADEFLAAV 480 (487)
T ss_pred CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhhC-----CHHHHHHHHHHHh
Confidence 88999999999999754 34577788888888875 7778888888765
No 155
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=84.84 E-value=3 Score=42.56 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=48.7
Q ss_pred cHHHHhhccccCceee---ccCch-hHHHHHhhCCCcccCCccc-chhhhHHHHHhhheeeeEeCc------ccCHHHHH
Q 013342 329 PQKEVLSHVAVGGFWS---HCGWN-STLECLCEGVPMICRPCFG-DQRVNARYVSHVWRTGLELEN------ELEREVVE 397 (445)
Q Consensus 329 pq~~lL~~~~~~~~I~---HgG~g-sv~eal~~GvP~v~~P~~~-DQ~~na~~v~~~~G~g~~~~~------~~t~~~l~ 397 (445)
+..+++..|++ +|. +=|+| +++||+++|+|+|+....+ .... -..+...-..|+.+.. .-+.++|+
T Consensus 467 ~y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v-~E~v~~~~~~gi~V~~r~~~~~~e~v~~La 543 (590)
T cd03793 467 DYEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFM-EEHIEDPESYGIYIVDRRFKSPDESVQQLT 543 (590)
T ss_pred chHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhh-HHHhccCCCceEEEecCCccchHHHHHHHH
Confidence 46778888998 665 34555 8999999999999986632 1111 1122221025666642 34678888
Q ss_pred HHHHHHhcC
Q 013342 398 KAVRRLMVG 406 (445)
Q Consensus 398 ~ai~~ll~~ 406 (445)
+++.++++.
T Consensus 544 ~~m~~~~~~ 552 (590)
T cd03793 544 QYMYEFCQL 552 (590)
T ss_pred HHHHHHhCC
Confidence 889888865
No 156
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=84.62 E-value=0.61 Score=45.38 Aligned_cols=113 Identities=13% Similarity=0.136 Sum_probs=68.6
Q ss_pred cCCcEEE-EeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHH----HHhhheeeeEeCcccCH
Q 013342 319 QENGCIV-KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARY----VSHVWRTGLELENELER 393 (445)
Q Consensus 319 ~~n~~~~-~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~----v~~~~G~g~~~~~~~t~ 393 (445)
.++++.+ +..+..++|..+|+ +||=. ...+.|.+..++|+|......|.....+- .+. ...|.. --+.
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~-~~pg~~---~~~~ 323 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEE-DLPGPI---VYNF 323 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTT-SSSS-E---ESSH
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHh-hCCCce---eCCH
Confidence 3566665 44567889999999 99977 45889999999999988766665422100 112 122222 3578
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 013342 394 EVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 394 ~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 441 (445)
++|.++|.+++++. ..++++.++..+++-. -..|.+++|.++.++
T Consensus 324 ~eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 324 EELIEAIENIIENP--DEYKEKREKFRDKFFK-YNDGNSSERIVNYIF 368 (369)
T ss_dssp HHHHHHHTTHHHHH--HHTHHHHHHHHHHHST-T--S-HHHHHHHHHH
T ss_pred HHHHHHHHhhhhCC--HHHHHHHHHHHHHhCC-CCCchHHHHHHHHHh
Confidence 99999999999873 4566667777777754 355666666666655
No 157
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=81.18 E-value=9.1 Score=35.32 Aligned_cols=43 Identities=21% Similarity=0.057 Sum_probs=34.6
Q ss_pred CcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCc
Q 013342 321 NGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC 366 (445)
Q Consensus 321 n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~ 366 (445)
.+.+.+-++-.++|.+++. +||-. ..+-.||+.+|+|++++..
T Consensus 184 ~~~~~~~~~~~~Ll~~s~~--Vvtin-StvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 184 VVIIDDDVNLYELLEQSDA--VVTIN-STVGLEALLHGKPVIVFGR 226 (269)
T ss_pred eEEECCCCCHHHHHHhCCE--EEEEC-CHHHHHHHHcCCceEEecC
Confidence 3444577888999999998 88744 4588999999999999864
No 158
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=80.31 E-value=17 Score=32.02 Aligned_cols=150 Identities=13% Similarity=0.106 Sum_probs=79.8
Q ss_pred hhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHh-cCCcEEEEeccHH
Q 013342 253 WLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAV-QENGCIVKWAPQK 331 (445)
Q Consensus 253 wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~~pq~ 331 (445)
|++ -.+++++.|..|.+. ..-+..|.+.+.++.++. +. +.+.+.+.. ..++....--.+.
T Consensus 4 ~l~-l~gk~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvs-p~----------~~~~l~~l~~~~~i~~~~~~~~~ 64 (205)
T TIGR01470 4 FAN-LEGRAVLVVGGGDVA-------LRKARLLLKAGAQLRVIA-EE----------LESELTLLAEQGGITWLARCFDA 64 (205)
T ss_pred EEE-cCCCeEEEECcCHHH-------HHHHHHHHHCCCEEEEEc-CC----------CCHHHHHHHHcCCEEEEeCCCCH
Confidence 344 345678888888665 444566667787776553 21 112222211 2355544222234
Q ss_pred HHhhccccCceeeccCchhHHHH-----HhhCCCcccC--CcccchhhhHHHHHhhheeeeEeCc----ccCHHHHHHHH
Q 013342 332 EVLSHVAVGGFWSHCGWNSTLEC-----LCEGVPMICR--PCFGDQRVNARYVSHVWRTGLELEN----ELEREVVEKAV 400 (445)
Q Consensus 332 ~lL~~~~~~~~I~HgG~gsv~ea-----l~~GvP~v~~--P~~~DQ~~na~~v~~~~G~g~~~~~----~~t~~~l~~ai 400 (445)
..+..+++ +|..-|...+++. -..|+|+-++ |-..| +..-..+.+. ++-+.+.. ..-...|++.|
T Consensus 65 ~dl~~~~l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~~~g-~l~iaisT~G~sP~la~~lr~~i 140 (205)
T TIGR01470 65 DILEGAFL--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIVDRS-PVVVAISSGGAAPVLARLLRERI 140 (205)
T ss_pred HHhCCcEE--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEEEcC-CEEEEEECCCCCcHHHHHHHHHH
Confidence 55777787 8887777655444 3467777333 22222 2222333442 34444422 23346677788
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 401 RRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 401 ~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
.+++.+.. ..+.+.+.++++.+++.
T Consensus 141 e~~l~~~~-~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 141 ETLLPPSL-GDLATLAATWRDAVKKR 165 (205)
T ss_pred HHhcchhH-HHHHHHHHHHHHHHHhh
Confidence 77775322 45666666677666654
No 159
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=76.52 E-value=13 Score=31.19 Aligned_cols=52 Identities=13% Similarity=0.306 Sum_probs=40.6
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEE-EEeCCCCCCCCCCCCCceEEEcCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSIT-VVHTHFNPPNPSNHPEFNFQSIPD 54 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt-~~~~~~~~~~~~~~~~~~~~~l~~ 54 (445)
|.+.-.|+.|-..-.+.++..|.++|+.|- |+|++-.... ...||..+++..
T Consensus 8 i~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gG--kR~GF~Ivdl~t 60 (179)
T COG1618 8 IFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGG--KRIGFKIVDLAT 60 (179)
T ss_pred EEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCC--eEeeeEEEEccC
Confidence 356677999999999999999999999998 6666544333 335888888874
No 160
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=76.25 E-value=35 Score=31.99 Aligned_cols=81 Identities=20% Similarity=0.245 Sum_probs=59.0
Q ss_pred CCcEEE-EeccHHH---HhhccccCceeec--cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc-ccC
Q 013342 320 ENGCIV-KWAPQKE---VLSHVAVGGFWSH--CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN-ELE 392 (445)
Q Consensus 320 ~n~~~~-~~~pq~~---lL~~~~~~~~I~H--gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t 392 (445)
+++.+. +++|.++ +|+.||++-|+++ =|.||+.-.++.|+|+++- .+=+.|... .+ .|+-+..+. .++
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl-~e-~gv~Vlf~~d~L~ 280 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDL-TE-QGLPVLFTGDDLD 280 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHH-Hh-CCCeEEecCCccc
Confidence 677664 7777654 9999999666654 4899999999999999876 344455554 44 388876555 788
Q ss_pred HHHHHHHHHHHhc
Q 013342 393 REVVEKAVRRLMV 405 (445)
Q Consensus 393 ~~~l~~ai~~ll~ 405 (445)
...+.++=+++..
T Consensus 281 ~~~v~e~~rql~~ 293 (322)
T PRK02797 281 EDIVREAQRQLAS 293 (322)
T ss_pred HHHHHHHHHHHHh
Confidence 8888887555543
No 161
>PRK08506 replicative DNA helicase; Provisional
Probab=75.31 E-value=6.1 Score=39.85 Aligned_cols=52 Identities=12% Similarity=0.216 Sum_probs=39.0
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-----CCCCCCceEEEc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN-----PSNHPEFNFQSI 52 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-----~~~~~~~~~~~l 52 (445)
+++...|+.|-....+.+|......|+.|.|++.+..... .+...++.+..+
T Consensus 195 ivIaarpg~GKT~fal~ia~~~~~~g~~V~~fSlEMs~~ql~~Rlla~~s~v~~~~i 251 (472)
T PRK08506 195 IIIAARPSMGKTTLCLNMALKALNQDKGVAFFSLEMPAEQLMLRMLSAKTSIPLQNL 251 (472)
T ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCcEEEEeCcCCHHHHHHHHHHHhcCCCHHHH
Confidence 3567789999999999999999888999999998765543 223345555444
No 162
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=75.10 E-value=12 Score=37.79 Aligned_cols=24 Identities=17% Similarity=0.207 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCC
Q 013342 14 PMLQLGTILYSNGFSITVVHTHFN 37 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~~~ 37 (445)
-.-.|+++|+++||+|.++++...
T Consensus 22 ~v~~L~~aL~~~G~~v~v~~p~y~ 45 (473)
T TIGR02095 22 VVGALPKALAALGHDVRVLLPAYG 45 (473)
T ss_pred HHHHHHHHHHHcCCeEEEEecCCc
Confidence 357899999999999999998543
No 163
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=73.81 E-value=11 Score=34.96 Aligned_cols=47 Identities=19% Similarity=0.200 Sum_probs=37.2
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCCCCCCCCCCCCCc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNG--FSITVVHTHFNPPNPSNHPEF 47 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~G--h~Vt~~~~~~~~~~~~~~~~~ 47 (445)
||++-..+.|++.-+.++.++|+++. -+|++++.+.........+.+
T Consensus 2 ILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~~p~i 50 (279)
T cd03789 2 ILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELMPEV 50 (279)
T ss_pred EEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhcCCcc
Confidence 57888889999999999999999974 899999996554444344444
No 164
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=72.67 E-value=5.1 Score=40.02 Aligned_cols=61 Identities=21% Similarity=0.300 Sum_probs=46.1
Q ss_pred hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHH
Q 013342 350 STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKN 418 (445)
Q Consensus 350 sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~ 418 (445)
++.||+++|+|+|++ ++-.=+..|.. .-.|...++ .-....+++++.++..| +.++.++.+
T Consensus 381 v~IEAMa~glPvvAt----~~GGP~EiV~~-~~tG~l~dp~~e~~~~~a~~~~kl~~~---p~l~~~~~~ 442 (495)
T KOG0853|consen 381 VPIEAMACGLPVVAT----NNGGPAEIVVH-GVTGLLIDPGQEAVAELADALLKLRRD---PELWARMGK 442 (495)
T ss_pred eeHHHHhcCCCEEEe----cCCCceEEEEc-CCcceeeCCchHHHHHHHHHHHHHhcC---HHHHHHHHH
Confidence 688999999999998 45555666777 477888876 33333799999999999 777665543
No 165
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=72.40 E-value=5.1 Score=31.67 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=31.5
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
+++.+.|+-.|.....-++..|..+|++|.++...
T Consensus 2 vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~ 36 (119)
T cd02067 2 VVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVD 36 (119)
T ss_pred EEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCC
Confidence 57889999999999999999999999999887653
No 166
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=72.04 E-value=9.5 Score=37.87 Aligned_cols=39 Identities=15% Similarity=0.238 Sum_probs=32.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILY-SNGFSITVVHTHFNPP 39 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~-~~Gh~Vt~~~~~~~~~ 39 (445)
+++...|+.|-..-.+.+|..++ +.|+.|.|++.+....
T Consensus 197 iviag~pg~GKT~~al~ia~~~a~~~g~~v~~fSlEm~~~ 236 (421)
T TIGR03600 197 IVIGARPSMGKTTLALNIAENVALREGKPVLFFSLEMSAE 236 (421)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHH
Confidence 35677899999999999998887 6799999999876543
No 167
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=71.05 E-value=18 Score=34.53 Aligned_cols=101 Identities=13% Similarity=0.082 Sum_probs=63.0
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCceE-EEcCCCCCCCCCCCChhHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN--GFSITVVHTHFNPPNPSNHPEFNF-QSIPDGLTADDVSTGINILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (445)
||++-..+.|++.=+.++.+.|++. +.+|++++.+.........+.++- +.++.. .. . ..+..
T Consensus 2 ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~id~v~~~~~~--~~---~-~~~~~-------- 67 (334)
T TIGR02195 2 ILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLERMPEIRQAIDMPLG--HG---A-LELTE-------- 67 (334)
T ss_pred EEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhcCchhceeeecCCc--cc---c-hhhhH--------
Confidence 6888999999999999999999997 899999998654444434444432 222211 00 0 01111
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEE
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSII 127 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~ 127 (445)
...+...+.+ . ++|++|.-....-...++...|+|.-.
T Consensus 68 ---~~~~~~~lr~--------~-~yD~vi~l~~~~~s~ll~~~~~~~~ri 105 (334)
T TIGR02195 68 ---RRRLGRSLRE--------E-RYDQAIVLPNSLKSALIPFFAGIPHRT 105 (334)
T ss_pred ---HHHHHHHHhh--------c-CCCEEEECCCCHHHHHHHHHcCCCcee
Confidence 0123334432 2 899999876555555667777877654
No 168
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=68.82 E-value=38 Score=30.98 Aligned_cols=26 Identities=19% Similarity=0.143 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 14 PMLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
-+..|+++|.+.| +|+++.+....+.
T Consensus 20 Gi~aL~~~l~~~g-~V~VvAP~~~~Sg 45 (257)
T PRK13932 20 GIHVLAASMKKIG-RVTVVAPAEPHSG 45 (257)
T ss_pred HHHHHHHHHHhCC-CEEEEcCCCCCCC
Confidence 3678999998888 7999988655543
No 169
>PRK05595 replicative DNA helicase; Provisional
Probab=68.41 E-value=9 Score=38.35 Aligned_cols=39 Identities=15% Similarity=0.283 Sum_probs=32.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILY-SNGFSITVVHTHFNPP 39 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~-~~Gh~Vt~~~~~~~~~ 39 (445)
+++...|+.|-..-.+.+|..++ +.|+.|.|++.+....
T Consensus 204 iviaarpg~GKT~~al~ia~~~a~~~g~~vl~fSlEms~~ 243 (444)
T PRK05595 204 ILIAARPSMGKTTFALNIAEYAALREGKSVAIFSLEMSKE 243 (444)
T ss_pred EEEEecCCCChHHHHHHHHHHHHHHcCCcEEEEecCCCHH
Confidence 35677899999999999998876 5699999999876543
No 170
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=66.56 E-value=9.3 Score=27.80 Aligned_cols=34 Identities=18% Similarity=0.343 Sum_probs=29.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
++++..+...|...+-.+|+.|.++|..|...=.
T Consensus 18 ~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~ 51 (79)
T PF12146_consen 18 VVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDH 51 (79)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 4788888999999999999999999999986543
No 171
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=66.41 E-value=8.8 Score=34.70 Aligned_cols=99 Identities=11% Similarity=0.057 Sum_probs=53.1
Q ss_pred CCCceEEEEeccccc---CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEE-Ee--ccH-
Q 013342 258 APESVIYVSLGSVAS---MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIV-KW--APQ- 330 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~--~pq- 330 (445)
.+++.|.+..|+... .+.+.+.++++.+.+.+.++++..++. +.....-..+.+..+.++... +- +.+
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~ 177 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPE-----EQEKEIADQIAAGLQNPVINLAGKTSLREL 177 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSH-----HHHHHHHHHHHTTHTTTTEEETTTS-HHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccch-----HHHHHHHHHHHHhcccceEeecCCCCHHHH
Confidence 456677788877554 567778889999988776665544221 000000011111112222222 22 233
Q ss_pred HHHhhccccCceeeccCchhHHHHHhhCCCcccC
Q 013342 331 KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICR 364 (445)
Q Consensus 331 ~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~ 364 (445)
..++.++++ +|+ .-.|.++=|...|+|+|++
T Consensus 178 ~ali~~a~~--~I~-~Dtg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 178 AALISRADL--VIG-NDTGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHHTSSE--EEE-ESSHHHHHHHHTT--EEEE
T ss_pred HHHHhcCCE--EEe-cCChHHHHHHHHhCCEEEE
Confidence 458889998 887 6678999999999999988
No 172
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=66.40 E-value=8.7 Score=33.48 Aligned_cols=26 Identities=27% Similarity=0.289 Sum_probs=24.5
Q ss_pred CccChHHHHHHHHHHHhCCCeEEEEe
Q 013342 8 FQGHMTPMLQLGTILYSNGFSITVVH 33 (445)
Q Consensus 8 ~~GH~~p~l~La~~L~~~Gh~Vt~~~ 33 (445)
..|+-.....|++.|.++||+|++++
T Consensus 12 ~~G~~~~~~~l~~~L~~~g~~v~v~~ 37 (229)
T cd01635 12 GGGVELVLLDLAKALARRGHEVEVVA 37 (229)
T ss_pred CCCchhHHHHHHHHHHHcCCeEEEEE
Confidence 56999999999999999999999998
No 173
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=65.79 E-value=49 Score=27.35 Aligned_cols=26 Identities=8% Similarity=0.128 Sum_probs=20.8
Q ss_pred ceeeccCch------hHHHHHhhCCCcccCCc
Q 013342 341 GFWSHCGWN------STLECLCEGVPMICRPC 366 (445)
Q Consensus 341 ~~I~HgG~g------sv~eal~~GvP~v~~P~ 366 (445)
.+++|+|-| .+.++...++|+|++.-
T Consensus 62 v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 62 VVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 388887754 67788999999999963
No 174
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=64.07 E-value=32 Score=31.24 Aligned_cols=27 Identities=22% Similarity=0.253 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 13 TPMLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 13 ~p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
--+.+|+++|. .+++|+++.++.+.+.
T Consensus 14 ~Gi~aL~~al~-~~~dV~VVAP~~~qSg 40 (252)
T COG0496 14 PGIRALARALR-EGADVTVVAPDREQSG 40 (252)
T ss_pred HHHHHHHHHHh-hCCCEEEEccCCCCcc
Confidence 33667888888 9999999999766654
No 175
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=63.72 E-value=41 Score=27.96 Aligned_cols=137 Identities=18% Similarity=0.180 Sum_probs=69.1
Q ss_pred eEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCc
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGG 341 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~ 341 (445)
.|-|-+||.. +....++....|++.+..+-+.+.+- =..|+.+.+ ++..-+- .++++
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa--------HR~p~~l~~----------~~~~~~~-~~~~v-- 58 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA--------HRTPERLLE----------FVKEYEA-RGADV-- 58 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T--------TTSHHHHHH----------HHHHTTT-TTESE--
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec--------cCCHHHHHH----------HHHHhcc-CCCEE--
Confidence 3555666654 67788889999999887655444221 012333211 1100000 23455
Q ss_pred eeeccCch----hHHHHHhhCCCcccCCcccchhh----hHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHh--cCCcHH
Q 013342 342 FWSHCGWN----STLECLCEGVPMICRPCFGDQRV----NARYVSHVWRTGLELEN-ELEREVVEKAVRRLM--VGEEGE 410 (445)
Q Consensus 342 ~I~HgG~g----sv~eal~~GvP~v~~P~~~DQ~~----na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll--~~~~~~ 410 (445)
+|.-.|.. ++..++- -+|+|.+|....+.. ....++---|+++..-. + +...-+-...++| .| +
T Consensus 59 iIa~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~-~~~nAA~~A~~ILa~~d---~ 133 (150)
T PF00731_consen 59 IIAVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGIN-NGFNAALLAARILALKD---P 133 (150)
T ss_dssp EEEEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SST-HHHHHHHHHHHHHHTT----H
T ss_pred EEEECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEcc-CchHHHHHHHHHHhcCC---H
Confidence 88877754 3333333 679999999776542 22333221155543322 1 2222222333444 45 7
Q ss_pred HHHHHHHHHHHHHHHH
Q 013342 411 EMRQRAKNLKEEIELC 426 (445)
Q Consensus 411 ~~~~~a~~l~~~~~~~ 426 (445)
.++++.+..++++++.
T Consensus 134 ~l~~kl~~~~~~~~~~ 149 (150)
T PF00731_consen 134 ELREKLRAYREKMKEK 149 (150)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcc
Confidence 8999999888888764
No 176
>PRK06321 replicative DNA helicase; Provisional
Probab=63.52 E-value=18 Score=36.51 Aligned_cols=40 Identities=15% Similarity=0.306 Sum_probs=32.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILY-SNGFSITVVHTHFNPPN 40 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~-~~Gh~Vt~~~~~~~~~~ 40 (445)
+++...|+.|-....+.+|...+ +.|..|.|++-+.....
T Consensus 229 iiiaarPgmGKTafal~ia~~~a~~~g~~v~~fSLEMs~~q 269 (472)
T PRK06321 229 MILAARPAMGKTALALNIAENFCFQNRLPVGIFSLEMTVDQ 269 (472)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhcCCeEEEEeccCCHHH
Confidence 35677899999999999999987 45999999998765543
No 177
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=63.43 E-value=88 Score=29.93 Aligned_cols=81 Identities=22% Similarity=0.195 Sum_probs=61.0
Q ss_pred CCcEE-EEeccHHH---HhhccccCceeec--cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc-ccC
Q 013342 320 ENGCI-VKWAPQKE---VLSHVAVGGFWSH--CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN-ELE 392 (445)
Q Consensus 320 ~n~~~-~~~~pq~~---lL~~~~~~~~I~H--gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t 392 (445)
+++.+ .+++|-++ +|..|+++-|.+. =|.|++.-.|+.|+|+++- .+--.-+-+++ .|+=+.-.. +++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~-~~ipVlf~~d~L~ 319 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKE-QGIPVLFYGDELD 319 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHh-CCCeEEeccccCC
Confidence 56655 47888655 9999999555543 5899999999999999875 33334455566 388776665 899
Q ss_pred HHHHHHHHHHHhc
Q 013342 393 REVVEKAVRRLMV 405 (445)
Q Consensus 393 ~~~l~~ai~~ll~ 405 (445)
...|++|=+++..
T Consensus 320 ~~~v~ea~rql~~ 332 (360)
T PF07429_consen 320 EALVREAQRQLAN 332 (360)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988875
No 178
>PRK06904 replicative DNA helicase; Validated
Probab=63.34 E-value=17 Score=36.71 Aligned_cols=53 Identities=11% Similarity=0.115 Sum_probs=38.3
Q ss_pred CEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCCCC-----CCCCCCceEEEcC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYS-NGFSITVVHTHFNPPN-----PSNHPEFNFQSIP 53 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~-~Gh~Vt~~~~~~~~~~-----~~~~~~~~~~~l~ 53 (445)
+++-..|+.|-....+.+|...+. .|+.|.|++.+..... .+..+++....+-
T Consensus 224 iiIaarPg~GKTafalnia~~~a~~~g~~Vl~fSlEMs~~ql~~Rlla~~s~v~~~~i~ 282 (472)
T PRK06904 224 IIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMLASLSRVDQTKIR 282 (472)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHhhCCCCHHHhc
Confidence 356778999999999999998875 5999999998765543 2333455544443
No 179
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=63.10 E-value=28 Score=33.48 Aligned_cols=103 Identities=19% Similarity=0.216 Sum_probs=64.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCce-EEEcCCCCCCCCCCCChhHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN--GFSITVVHTHFNPPNPSNHPEFN-FQSIPDGLTADDVSTGINILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (445)
||++-....|++.=+.++.+.|.++ +.+|++++.+.........+.++ ++.++.. .. . ... .+
T Consensus 8 ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~P~id~vi~~~~~--~~----~--~~~--~~---- 73 (352)
T PRK10422 8 ILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNK--KA----G--ASE--KI---- 73 (352)
T ss_pred EEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhccCCCceEEEEeccc--cc----c--HHH--HH----
Confidence 5788888999999999999999997 89999999866555544445553 2333321 00 0 000 01
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEE
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSII 127 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~ 127 (445)
..+..++..+.+. ++|++|.-........++...|+|...
T Consensus 74 -~~~~~l~~~lr~~---------~yD~vidl~~~~~s~ll~~l~~a~~ri 113 (352)
T PRK10422 74 -KNFFSLIKVLRAN---------KYDLIVNLTDQWMVALLVRLLNARVKI 113 (352)
T ss_pred -HHHHHHHHHHhhC---------CCCEEEEcccchHHHHHHHHhCCCeEE
Confidence 0111234444432 899999654444455667777877755
No 180
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=62.76 E-value=34 Score=29.52 Aligned_cols=61 Identities=13% Similarity=0.131 Sum_probs=43.8
Q ss_pred cCCcccchhhhHHHHHhhheeeeEeCc-------------ccCHHHHH----HHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 013342 363 CRPCFGDQRVNARYVSHVWRTGLELEN-------------ELEREVVE----KAVRRLMVGEEGEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 363 ~~P~~~DQ~~na~~v~~~~G~g~~~~~-------------~~t~~~l~----~ai~~ll~~~~~~~~~~~a~~l~~~~~~ 425 (445)
.+|.+.||...-..+-+.+.+|+.... .++++.++ +.|.++|+| +.+-+|-+|+.+.+.+
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d---~~IIRnr~KI~Avi~N 98 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQD---AGIIRHRGKIQAIIGN 98 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcC---chhHHhHHHHHHHHHH
Confidence 456688888887766443678877621 46777776 678999999 6777777777777666
Q ss_pred H
Q 013342 426 C 426 (445)
Q Consensus 426 ~ 426 (445)
+
T Consensus 99 A 99 (187)
T PRK10353 99 A 99 (187)
T ss_pred H
Confidence 5
No 181
>PRK08760 replicative DNA helicase; Provisional
Probab=62.54 E-value=9.8 Score=38.40 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=32.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYS-NGFSITVVHTHFNPPN 40 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~-~Gh~Vt~~~~~~~~~~ 40 (445)
+++...|+.|-....+.+|...+. .|+.|.|++-+.....
T Consensus 232 ivIaarPg~GKTafal~iA~~~a~~~g~~V~~fSlEMs~~q 272 (476)
T PRK08760 232 IILAARPAMGKTTFALNIAEYAAIKSKKGVAVFSMEMSASQ 272 (476)
T ss_pred EEEEeCCCCChhHHHHHHHHHHHHhcCCceEEEeccCCHHH
Confidence 366778999999999999998874 5999999998765543
No 182
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=62.02 E-value=97 Score=26.95 Aligned_cols=55 Identities=13% Similarity=0.143 Sum_probs=40.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC-C-C----CCCCCCceEEEcCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP-P-N----PSNHPEFNFQSIPDG 55 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~-~-~----~~~~~~~~~~~l~~~ 55 (445)
|.+++..+.|-....+.+|-+...+|+.|.++-.-... . . ....+++.+......
T Consensus 25 v~v~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQFlKg~~~~GE~~~l~~l~~v~~~~~g~~ 85 (191)
T PRK05986 25 LIVHTGNGKGKSTAAFGMALRAVGHGKKVGVVQFIKGAWSTGERNLLEFGGGVEFHVMGTG 85 (191)
T ss_pred EEEECCCCCChHHHHHHHHHHHHHCCCeEEEEEEecCCCccCHHHHHhcCCCcEEEECCCC
Confidence 46778889999999999999999999999998753222 1 1 223357888887754
No 183
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=59.99 E-value=64 Score=30.17 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=30.2
Q ss_pred EEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 013342 3 LVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP 38 (445)
Q Consensus 3 ~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~ 38 (445)
+.-.|+-|--.-.-.|.+.|.++||.|-++.-++..
T Consensus 56 ITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSS 91 (323)
T COG1703 56 ITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPSS 91 (323)
T ss_pred ecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCC
Confidence 455688888889999999999999999998875443
No 184
>PRK08006 replicative DNA helicase; Provisional
Probab=59.90 E-value=35 Score=34.42 Aligned_cols=53 Identities=9% Similarity=0.099 Sum_probs=38.5
Q ss_pred CEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCCCCCCC-----CCCCCCceEEEcC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILY-SNGFSITVVHTHFNPPN-----PSNHPEFNFQSIP 53 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~-~~Gh~Vt~~~~~~~~~~-----~~~~~~~~~~~l~ 53 (445)
+++-..|++|-....+.+|...+ +.|+.|.|++-+..... .+...++....+.
T Consensus 227 iiIaarPgmGKTafalnia~~~a~~~g~~V~~fSlEM~~~ql~~Rlla~~~~v~~~~i~ 285 (471)
T PRK08006 227 IIVAARPSMGKTTFAMNLCENAAMLQDKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIR 285 (471)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhcCCeEEEEeccCCHHHHHHHHHHHhcCCCHHHhh
Confidence 35677899999999999999887 46999999998765543 2233455554444
No 185
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=58.24 E-value=84 Score=28.69 Aligned_cols=26 Identities=15% Similarity=0.143 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 14 PMLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
-+.+|+++|.+ +|+|+++.+....+.
T Consensus 15 Gi~aL~~~l~~-~~~V~VvAP~~~qSg 40 (253)
T PRK13935 15 GIIILAEYLSE-KHEVFVVAPDKERSA 40 (253)
T ss_pred HHHHHHHHHHh-CCcEEEEccCCCCcc
Confidence 36788888865 689999998655544
No 186
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=57.94 E-value=33 Score=32.76 Aligned_cols=95 Identities=14% Similarity=0.102 Sum_probs=59.8
Q ss_pred CceEEEEec-cccc---CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEec--cH-HH
Q 013342 260 ESVIYVSLG-SVAS---MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWA--PQ-KE 332 (445)
Q Consensus 260 ~~~v~vs~G-s~~~---~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~--pq-~~ 332 (445)
++.|.++.| +... .+.+.+.++++.+.+.+.++++..++. + ...-+.+....+....+.+-. .+ ..
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~---e----~e~~~~i~~~~~~~~~l~~k~sL~e~~~ 247 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD---E----EERAEEIAKGLPNAVILAGKTSLEELAA 247 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH---H----HHHHHHHHHhcCCccccCCCCCHHHHHH
Confidence 678889888 4322 677889999999999885555443221 0 111122222223222244333 33 33
Q ss_pred HhhccccCceeeccCchhHHHHHhhCCCcccC
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCEGVPMICR 364 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~ 364 (445)
++.++++ +|+ .-.|-++=|.+.|+|+|.+
T Consensus 248 li~~a~l--~I~-~DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 248 LIAGADL--VIG-NDSGPMHLAAALGTPTIAL 276 (334)
T ss_pred HHhcCCE--EEc-cCChHHHHHHHcCCCEEEE
Confidence 7778887 886 6678899999999999987
No 187
>PRK09165 replicative DNA helicase; Provisional
Probab=57.77 E-value=25 Score=35.79 Aligned_cols=40 Identities=10% Similarity=0.123 Sum_probs=32.0
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC---------------CCeEEEEeCCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN---------------GFSITVVHTHFNPPN 40 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~---------------Gh~Vt~~~~~~~~~~ 40 (445)
+++...|+.|-..-.+.+|...+.+ |..|.|++.+.....
T Consensus 220 ivIaarpg~GKT~~al~ia~~~a~~~~~~~~~~~~~~~~~g~~vl~fSlEMs~~q 274 (497)
T PRK09165 220 IILAGRPSMGKTALATNIAFNAAKAYRREAQPDGSKKAVNGGVVGFFSLEMSAEQ 274 (497)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhhcccccccccccccCCCeEEEEeCcCCHHH
Confidence 3667789999999999999888653 789999998765543
No 188
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=57.25 E-value=1.2e+02 Score=25.52 Aligned_cols=27 Identities=19% Similarity=0.259 Sum_probs=20.9
Q ss_pred CceeeccCch------hHHHHHhhCCCcccCCc
Q 013342 340 GGFWSHCGWN------STLECLCEGVPMICRPC 366 (445)
Q Consensus 340 ~~~I~HgG~g------sv~eal~~GvP~v~~P~ 366 (445)
+.+++|+|-| .+.+|...++|+|++.-
T Consensus 61 gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 61 GALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred EEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 3377777755 66788999999999963
No 189
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=56.79 E-value=1.2e+02 Score=27.01 Aligned_cols=146 Identities=8% Similarity=-0.024 Sum_probs=82.8
Q ss_pred hhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHh-cCCcEEEEeccHH
Q 013342 253 WLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAV-QENGCIVKWAPQK 331 (445)
Q Consensus 253 wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~~pq~ 331 (445)
|++ ..+++++.|..|.++ .+=+..|.+.+.++.++.. .+.+.+.+.. .+++....---+.
T Consensus 20 ~l~-~~~~~VLVVGGG~VA-------~RK~~~Ll~~gA~VtVVap-----------~i~~el~~l~~~~~i~~~~r~~~~ 80 (223)
T PRK05562 20 SLL-SNKIKVLIIGGGKAA-------FIKGKTFLKKGCYVYILSK-----------KFSKEFLDLKKYGNLKLIKGNYDK 80 (223)
T ss_pred EEE-CCCCEEEEECCCHHH-------HHHHHHHHhCCCEEEEEcC-----------CCCHHHHHHHhCCCEEEEeCCCCh
Confidence 454 356678888888665 2334556667777766652 1223332222 2444444222233
Q ss_pred HHhhccccCceeeccCchhHHHHHhh-----CCCcccCCcccchhhh-----HHHHHhhheeeeEeCc----ccCHHHHH
Q 013342 332 EVLSHVAVGGFWSHCGWNSTLECLCE-----GVPMICRPCFGDQRVN-----ARYVSHVWRTGLELEN----ELEREVVE 397 (445)
Q Consensus 332 ~lL~~~~~~~~I~HgG~gsv~eal~~-----GvP~v~~P~~~DQ~~n-----a~~v~~~~G~g~~~~~----~~t~~~l~ 397 (445)
.-|..+.+ +|..-+--.+++.++. |+++.++ |++.. -+.+.+. ++-+.+.. ..-+..|+
T Consensus 81 ~dl~g~~L--ViaATdD~~vN~~I~~~a~~~~~lvn~v----d~p~~~dFi~PAiv~rg-~l~IaIST~G~sP~lar~lR 153 (223)
T PRK05562 81 EFIKDKHL--IVIATDDEKLNNKIRKHCDRLYKLYIDC----SDYKKGLCIIPYQRSTK-NFVFALNTKGGSPKTSVFIG 153 (223)
T ss_pred HHhCCCcE--EEECCCCHHHHHHHHHHHHHcCCeEEEc----CCcccCeEEeeeEEecC-CEEEEEECCCcCcHHHHHHH
Confidence 44667777 8887787777765543 5555544 44322 2334442 44444432 23346788
Q ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 398 KAVRRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 398 ~ai~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
+.|.+++.+. ..+.+.+.++++.++..
T Consensus 154 ~~ie~~l~~~--~~l~~~l~~~R~~vk~~ 180 (223)
T PRK05562 154 EKVKNFLKKY--DDFIEYVTKIRNKAKKN 180 (223)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHhh
Confidence 8898888542 57788888888877763
No 190
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=55.91 E-value=46 Score=31.49 Aligned_cols=132 Identities=14% Similarity=0.023 Sum_probs=72.0
Q ss_pred CceEE-EEeccccc--CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEe--ccH-HHH
Q 013342 260 ESVIY-VSLGSVAS--MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKW--APQ-KEV 333 (445)
Q Consensus 260 ~~~v~-vs~Gs~~~--~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~--~pq-~~l 333 (445)
++.|. +-.||... .+.+.+.++++.+.+.+.++++..++.. | ...-+.+.+.. .++.+++- +.+ .++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~----e--~~~~~~i~~~~-~~~~l~g~~sL~elaal 250 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH----E--EQRAKRLAEGF-PYVEVLPKLSLEQVARV 250 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH----H--HHHHHHHHccC-CcceecCCCCHHHHHHH
Confidence 34444 33344322 5667788888888776777655433210 0 01112221111 22333332 333 448
Q ss_pred hhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhh------HHHHHhhheeeeEeCcccCHHHHHHHHHHHhc
Q 013342 334 LSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVN------ARYVSHVWRTGLELENELEREVVEKAVRRLMV 405 (445)
Q Consensus 334 L~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~n------a~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~ 405 (445)
+.++++ +|+ .-.|.++=|...|+|+|++=-..|-..+ ...+.- .+--+. .++++.+.+++.++|+
T Consensus 251 i~~a~l--~I~-nDSGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~~---~~~cm~-~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 251 LAGAKA--VVS-VDTGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACRS---PGKSMA-DLSAETVFQKLETLIS 321 (322)
T ss_pred HHhCCE--EEe-cCCcHHHHHHHhCCCEEEEECCCCcccccCCCCCceeecC---CCcccc-cCCHHHHHHHHHHHhh
Confidence 999998 997 5678999999999999987221121111 111110 000011 7899999999988874
No 191
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=55.80 E-value=73 Score=29.19 Aligned_cols=21 Identities=24% Similarity=0.229 Sum_probs=18.0
Q ss_pred HHHHHHHHHhCCCeEEEEeCC
Q 013342 15 MLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
-..|++.|.++||+|+..+..
T Consensus 12 gr~la~~L~~~g~~v~~s~~t 32 (256)
T TIGR00715 12 SRAIAKGLIAQGIEILVTVTT 32 (256)
T ss_pred HHHHHHHHHhCCCeEEEEEcc
Confidence 678999999999999987664
No 192
>cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin.
Probab=55.43 E-value=1.3e+02 Score=25.37 Aligned_cols=55 Identities=16% Similarity=0.230 Sum_probs=38.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC--CCC----CCCCCCceEEEcCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFN--PPN----PSNHPEFNFQSIPDG 55 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~--~~~----~~~~~~~~~~~l~~~ 55 (445)
|.+++.++.|-....+.+|-+...+|+.|.++-.-.. ... ....+++.+......
T Consensus 5 i~vy~g~G~Gkt~~a~g~~~ra~~~g~~v~~vQFlKg~~~~gE~~~l~~l~~v~~~~~g~~ 65 (159)
T cd00561 5 IQVYTGNGKGKTTAALGLALRALGHGYRVGVVQFLKGGWKYGELKALERLPNIEIHRMGRG 65 (159)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEEeCCCCccCHHHHHHhCCCcEEEECCCC
Confidence 3567888999888888888888889999999543211 111 223357888877753
No 193
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=55.30 E-value=24 Score=29.90 Aligned_cols=22 Identities=23% Similarity=0.175 Sum_probs=16.8
Q ss_pred ChHHHHHHHHHHHh-CCCeEEEE
Q 013342 11 HMTPMLQLGTILYS-NGFSITVV 32 (445)
Q Consensus 11 H~~p~l~La~~L~~-~Gh~Vt~~ 32 (445)
|.....+|+++|.+ +|.++.+.
T Consensus 1 H~~aA~Al~eal~~~~~~~~~v~ 23 (169)
T PF06925_consen 1 HNSAARALAEALERRRGPDAEVE 23 (169)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEE
Confidence 78889999999988 56555544
No 194
>PRK05636 replicative DNA helicase; Provisional
Probab=54.98 E-value=12 Score=37.95 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=31.5
Q ss_pred CEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILY-SNGFSITVVHTHFNPP 39 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~-~~Gh~Vt~~~~~~~~~ 39 (445)
+++...|+.|-....+.+|...+ +.|..|.|++.+....
T Consensus 268 iiiaarpg~GKT~~al~~a~~~a~~~g~~v~~fSlEMs~~ 307 (505)
T PRK05636 268 IIVAARPGVGKSTLALDFMRSASIKHNKASVIFSLEMSKS 307 (505)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEEeeCCHH
Confidence 35677899999999999998876 4689999998876543
No 195
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=54.47 E-value=19 Score=29.39 Aligned_cols=38 Identities=18% Similarity=0.102 Sum_probs=33.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP 38 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~ 38 (445)
+++.+.++-+|-.-..-++..|.++|++|+++......
T Consensus 6 vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~ 43 (137)
T PRK02261 6 VVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQ 43 (137)
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 47888999999999999999999999999999875433
No 196
>PRK08840 replicative DNA helicase; Provisional
Probab=53.46 E-value=28 Score=35.03 Aligned_cols=53 Identities=9% Similarity=0.117 Sum_probs=38.6
Q ss_pred CEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCCCC-----CCCCCCceEEEcC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYS-NGFSITVVHTHFNPPN-----PSNHPEFNFQSIP 53 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~-~Gh~Vt~~~~~~~~~~-----~~~~~~~~~~~l~ 53 (445)
+++-..|++|-....+.+|...+. .|+.|.|++-+..... .+..+++....+.
T Consensus 220 iviaarPg~GKTafalnia~~~a~~~~~~v~~fSlEMs~~ql~~Rlla~~s~v~~~~i~ 278 (464)
T PRK08840 220 IIVAARPSMGKTTFAMNLCENAAMDQDKPVLIFSLEMPAEQLMMRMLASLSRVDQTKIR 278 (464)
T ss_pred EEEEeCCCCchHHHHHHHHHHHHHhCCCeEEEEeccCCHHHHHHHHHHhhCCCCHHHHh
Confidence 356778999999999999999874 5999999998765543 2333455554443
No 197
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=53.45 E-value=43 Score=26.17 Aligned_cols=70 Identities=9% Similarity=-0.006 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEE-------eccHHHHhh---ccccCceeec
Q 013342 276 KEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVK-------WAPQKEVLS---HVAVGGFWSH 345 (445)
Q Consensus 276 ~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-------~~pq~~lL~---~~~~~~~I~H 345 (445)
+...+++.++++++.+.+.+..+. +.....+ +..+..+..+ |+..+.++. ...+ ...|
T Consensus 12 eia~r~~ra~r~~Gi~tv~v~s~~--------d~~s~~~--~~ad~~~~~~~~~~~~~yl~~e~I~~ia~~~g~--~~i~ 79 (110)
T PF00289_consen 12 EIAVRIIRALRELGIETVAVNSNP--------DTVSTHV--DMADEAYFEPPGPSPESYLNIEAIIDIARKEGA--DAIH 79 (110)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEEGG--------GTTGHHH--HHSSEEEEEESSSGGGTTTSHHHHHHHHHHTTE--SEEE
T ss_pred HHHHHHHHHHHHhCCcceeccCch--------hcccccc--cccccceecCcchhhhhhccHHHHhhHhhhhcC--cccc
Confidence 446779999999999998887433 1122222 2456666665 566555443 3333 7789
Q ss_pred cCchhHHHHHhh
Q 013342 346 CGWNSTLECLCE 357 (445)
Q Consensus 346 gG~gsv~eal~~ 357 (445)
+|+|-..|....
T Consensus 80 pGyg~lse~~~f 91 (110)
T PF00289_consen 80 PGYGFLSENAEF 91 (110)
T ss_dssp STSSTTTTHHHH
T ss_pred cccchhHHHHHH
Confidence 999988777554
No 198
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=53.38 E-value=20 Score=28.18 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=29.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
+++.+.+..-|-.-+..|+..|.++||+|.++..
T Consensus 3 v~~~~~~~~~~~lGl~~la~~l~~~G~~v~~~d~ 36 (121)
T PF02310_consen 3 VVLACVPGEVHPLGLLYLAAYLRKAGHEVDILDA 36 (121)
T ss_dssp EEEEEBTTSSTSHHHHHHHHHHHHTTBEEEEEES
T ss_pred EEEEeeCCcchhHHHHHHHHHHHHCCCeEEEECC
Confidence 3677888899999999999999999999998855
No 199
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=53.31 E-value=1.1e+02 Score=27.90 Aligned_cols=26 Identities=19% Similarity=0.123 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 14 PMLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
-+..|+++|.+. |+|+++.+....+.
T Consensus 15 Gi~aL~~~l~~~-~~V~VvAP~~~qSg 40 (250)
T PRK00346 15 GIRALAEALREL-ADVTVVAPDRERSG 40 (250)
T ss_pred hHHHHHHHHHhC-CCEEEEeCCCCCcC
Confidence 367899999988 79999998655544
No 200
>PRK07004 replicative DNA helicase; Provisional
Probab=52.97 E-value=29 Score=34.90 Aligned_cols=40 Identities=13% Similarity=0.316 Sum_probs=32.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILY-SNGFSITVVHTHFNPPN 40 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~-~~Gh~Vt~~~~~~~~~~ 40 (445)
+++...|+.|-....+.+|..++ +.|+.|.|++-+.....
T Consensus 216 iviaarpg~GKT~~al~ia~~~a~~~~~~v~~fSlEM~~~q 256 (460)
T PRK07004 216 IIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSMEMPGTQ 256 (460)
T ss_pred EEEEeCCCCCccHHHHHHHHHHHHHcCCeEEEEeCCCCHHH
Confidence 35677899999999999999886 46999999998765543
No 201
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=52.85 E-value=28 Score=30.11 Aligned_cols=40 Identities=23% Similarity=0.203 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCC
Q 013342 15 MLQLGTILYSNGFSITVVHTHFNPPN-PSNHPEFNFQSIPD 54 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~~~~~~~-~~~~~~~~~~~l~~ 54 (445)
.-.|+..|+++||+||+.+....... .....|++...+|.
T Consensus 23 ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~ 63 (185)
T PF09314_consen 23 VEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPA 63 (185)
T ss_pred HHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCC
Confidence 45688899999999999987544422 33456888888873
No 202
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.80 E-value=94 Score=27.98 Aligned_cols=27 Identities=11% Similarity=0.089 Sum_probs=22.2
Q ss_pred CceEEEEcCCCC---chHHHHHHhCCceEE
Q 013342 101 QIACIIYDEIFY---FPEAAANQLNLQSII 127 (445)
Q Consensus 101 ~~D~vv~D~~~~---~~~~~A~~~giP~v~ 127 (445)
+-++.+.|..+. -+..+|...|+|++.
T Consensus 149 ~r~l~flDs~T~a~S~a~~iAk~~gVp~~~ 178 (250)
T COG2861 149 ERGLYFLDSGTIANSLAGKIAKEIGVPVIK 178 (250)
T ss_pred HCCeEEEcccccccchhhhhHhhcCCceee
Confidence 569999998874 356789999999987
No 203
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=52.60 E-value=1.4e+02 Score=25.08 Aligned_cols=26 Identities=12% Similarity=0.185 Sum_probs=21.6
Q ss_pred CceeeccCch------hHHHHHhhCCCcccCC
Q 013342 340 GGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 340 ~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
+.+++|+|-| .+.+|...++|+|++.
T Consensus 65 ~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 65 GVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred EEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3488888865 6788999999999996
No 204
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=51.43 E-value=23 Score=33.44 Aligned_cols=55 Identities=16% Similarity=0.209 Sum_probs=38.5
Q ss_pred hhccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 334 LSHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 334 L~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
...+++ +|+=||-||++.+.+. ++|++.|-. -+ +|. .. +.+++++.+++.+++++
T Consensus 66 ~~~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~-----------G~-lGF--Lt--~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 66 DSSMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINT-----------GH-LGF--LT--EAYLNQLDEAIDQVLAG 124 (305)
T ss_pred ccCcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeC-----------CC-Ccc--cc--cCCHHHHHHHHHHHHcC
Confidence 345677 9999999999999775 678877632 11 121 11 45678888888888876
No 205
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=51.32 E-value=1.1e+02 Score=28.07 Aligned_cols=39 Identities=13% Similarity=0.026 Sum_probs=24.1
Q ss_pred HHHHHHHHHhC---CCeEEEEeCCCCCCC----CCCCCCceEEEcC
Q 013342 15 MLQLGTILYSN---GFSITVVHTHFNPPN----PSNHPEFNFQSIP 53 (445)
Q Consensus 15 ~l~La~~L~~~---Gh~Vt~~~~~~~~~~----~~~~~~~~~~~l~ 53 (445)
+.+|+++|.+. |++|+++.++...+. +.-...++...+.
T Consensus 16 l~aL~~~l~~~~~~~~~V~VVAP~~eqSg~ghaiT~~~pl~~~~~~ 61 (261)
T PRK13931 16 LEVLEQIATELAGPDGEVWTVAPAFEQSGVGHCISYTHPMMIAELG 61 (261)
T ss_pred HHHHHHHHHHhccCCCeEEEEeCCCCCCCCcccccCCCCeEEEEeC
Confidence 55677877763 479999998755543 2222345665554
No 206
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=50.38 E-value=17 Score=28.94 Aligned_cols=23 Identities=9% Similarity=-0.005 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCC
Q 013342 13 TPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 13 ~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
.-.++|+.+.++|||+|.++...
T Consensus 18 DTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 18 DTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -HHHHHHHHHHHTT-EEEEE-GG
T ss_pred ChHHHHHHHHHHCCCEEEEEEcC
Confidence 45789999999999999999874
No 207
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=50.08 E-value=17 Score=31.44 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=20.1
Q ss_pred EcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 4 VPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 4 ~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
++..+.|.+ -..||+++..+|++||+++.+
T Consensus 23 ItN~SSG~~--G~~lA~~~~~~Ga~V~li~g~ 52 (185)
T PF04127_consen 23 ITNRSSGKM--GAALAEEAARRGAEVTLIHGP 52 (185)
T ss_dssp EEES--SHH--HHHHHHHHHHTT-EEEEEE-T
T ss_pred ecCCCcCHH--HHHHHHHHHHCCCEEEEEecC
Confidence 344444443 468999999999999999985
No 208
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=49.02 E-value=14 Score=31.56 Aligned_cols=69 Identities=14% Similarity=0.163 Sum_probs=39.5
Q ss_pred hccccCceeeccCchhHHHHHhhCCCcccCCccc-----------------------chhhhHHHHHhhheeeeEeCccc
Q 013342 335 SHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFG-----------------------DQRVNARYVSHVWRTGLELENEL 391 (445)
Q Consensus 335 ~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~-----------------------DQ~~na~~v~~~~G~g~~~~~~~ 391 (445)
..+++ +||+||......... ++|+|-+|..+ ........+++.+|+-+..-.--
T Consensus 33 ~g~dV--iIsRG~ta~~lr~~~-~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~ 109 (176)
T PF06506_consen 33 EGADV--IISRGGTAELLRKHV-SIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPYD 109 (176)
T ss_dssp TT-SE--EEEEHHHHHHHHCC--SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEES
T ss_pred cCCeE--EEECCHHHHHHHHhC-CCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEEC
Confidence 45676 999999888888877 99999999742 22223444444344444333334
Q ss_pred CHHHHHHHHHHHhcC
Q 013342 392 EREVVEKAVRRLMVG 406 (445)
Q Consensus 392 t~~~l~~ai~~ll~~ 406 (445)
+.+++...|.++..+
T Consensus 110 ~~~e~~~~i~~~~~~ 124 (176)
T PF06506_consen 110 SEEEIEAAIKQAKAE 124 (176)
T ss_dssp SHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHc
Confidence 567777777776643
No 209
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=47.84 E-value=82 Score=26.88 Aligned_cols=102 Identities=17% Similarity=0.226 Sum_probs=60.8
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHH-HHHHhcCCcEEEEeccHHHHhhc
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEV-LAEAVQENGCIVKWAPQKEVLSH 336 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~pq~~lL~~ 336 (445)
.++.+-.+.+|.+. +.+++-++.++.+++..-+.. -+.. . .. ....+.+.+++|+.
T Consensus 35 ~g~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~----------~~~~~~----~~--~~~~~~~l~ell~~ 91 (178)
T PF02826_consen 35 RGKTVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSP----------KPEEGA----DE--FGVEYVSLDELLAQ 91 (178)
T ss_dssp TTSEEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSC----------HHHHHH----HH--TTEEESSHHHHHHH
T ss_pred CCCEEEEEEEcCCc-------CeEeeeeecCCceeEEecccC----------Chhhhc----cc--ccceeeehhhhcch
Confidence 45678889999887 677777778888776554222 1111 1 11 12377789999999
Q ss_pred cccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEe-C--c--ccCHHHHHHHHH
Q 013342 337 VAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLEL-E--N--ELEREVVEKAVR 401 (445)
Q Consensus 337 ~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~-~--~--~~t~~~l~~ai~ 401 (445)
+|+ ++.|+-.+.- ..+..++..++. ++-|..+ + . -++.++|.++++
T Consensus 92 aDi--v~~~~plt~~----------------T~~li~~~~l~~-mk~ga~lvN~aRG~~vde~aL~~aL~ 142 (178)
T PF02826_consen 92 ADI--VSLHLPLTPE----------------TRGLINAEFLAK-MKPGAVLVNVARGELVDEDALLDALE 142 (178)
T ss_dssp -SE--EEE-SSSSTT----------------TTTSBSHHHHHT-STTTEEEEESSSGGGB-HHHHHHHHH
T ss_pred hhh--hhhhhccccc----------------cceeeeeeeeec-cccceEEEeccchhhhhhhHHHHHHh
Confidence 998 8777664321 345666777777 6655333 1 1 566666666654
No 210
>PRK07773 replicative DNA helicase; Validated
Probab=47.37 E-value=38 Score=37.23 Aligned_cols=40 Identities=10% Similarity=0.188 Sum_probs=32.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN-GFSITVVHTHFNPPN 40 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~-Gh~Vt~~~~~~~~~~ 40 (445)
+++...|+.|-....+.+|...+.+ |..|.|++-+.....
T Consensus 220 ivIagrPg~GKT~fal~ia~~~a~~~~~~V~~fSlEms~~q 260 (886)
T PRK07773 220 IIVAARPSMGKTTFGLDFARNCAIRHRLAVAIFSLEMSKEQ 260 (886)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHhcCCeEEEEecCCCHHH
Confidence 3567789999999999999998754 899999998765543
No 211
>PRK05748 replicative DNA helicase; Provisional
Probab=47.29 E-value=43 Score=33.58 Aligned_cols=40 Identities=8% Similarity=0.212 Sum_probs=32.9
Q ss_pred CEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILY-SNGFSITVVHTHFNPPN 40 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~-~~Gh~Vt~~~~~~~~~~ 40 (445)
+++...|+.|-..-.+.+|...+ +.|+.|.|++.+.....
T Consensus 206 ivIaarpg~GKT~~al~ia~~~a~~~g~~v~~fSlEms~~~ 246 (448)
T PRK05748 206 IIVAARPSVGKTAFALNIAQNVATKTDKNVAIFSLEMGAES 246 (448)
T ss_pred EEEEeCCCCCchHHHHHHHHHHHHhCCCeEEEEeCCCCHHH
Confidence 36677899999999999999886 46999999998765543
No 212
>TIGR00665 DnaB replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites.
Probab=46.70 E-value=39 Score=33.62 Aligned_cols=40 Identities=13% Similarity=0.223 Sum_probs=32.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYS-NGFSITVVHTHFNPPN 40 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~-~Gh~Vt~~~~~~~~~~ 40 (445)
+++...|+.|=..-.+.+|..++. .|+.|.|++.+.....
T Consensus 198 ~vi~g~pg~GKT~~~l~~a~~~a~~~g~~vl~~SlEm~~~~ 238 (434)
T TIGR00665 198 IILAARPSMGKTAFALNIAENAAIKEGKPVAFFSLEMSAEQ 238 (434)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhCCCeEEEEeCcCCHHH
Confidence 366778999999999999998875 6999999998765443
No 213
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=46.69 E-value=28 Score=32.07 Aligned_cols=53 Identities=17% Similarity=0.080 Sum_probs=36.2
Q ss_pred ccccCceeeccCchhHHHHHh------hCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 336 HVAVGGFWSHCGWNSTLECLC------EGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~------~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+++ +|+-||-||++.+++ .++|++.+-. .+ +|.= - +.+++++.+++.+++++
T Consensus 35 ~~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN~-----------G~-lGFL--~--~~~~~~~~~~l~~i~~g 93 (265)
T PRK04885 35 NPDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVHT-----------GH-LGFY--T--DWRPFEVDKLVIALAKD 93 (265)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEeC-----------CC-ceec--c--cCCHHHHHHHHHHHHcC
Confidence 4566 999999999999986 4778877642 11 1211 1 35567777777777765
No 214
>PLN02470 acetolactate synthase
Probab=46.20 E-value=86 Score=32.66 Aligned_cols=90 Identities=17% Similarity=0.133 Sum_probs=50.9
Q ss_pred EecccccCCh--hhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHh-c-CCcEEEEec-cHHHH-------
Q 013342 266 SLGSVASMDK--KEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAV-Q-ENGCIVKWA-PQKEV------- 333 (445)
Q Consensus 266 s~Gs~~~~~~--~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~-~n~~~~~~~-pq~~l------- 333 (445)
+|||-...+. ..-..+++.|++.|++.|+-+.++.. ..+.+.+ . +++.++.-- .+.+.
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~----------~~l~dal~~~~~i~~i~~rhE~~A~~~Adgya 71 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGAS----------MEIHQALTRSNCIRNVLCRHEQGEVFAAEGYA 71 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCccc----------HHHHHHHhccCCceEEEeccHHHHHHHHHHHH
Confidence 4565554222 23466888888888888887754411 1121112 1 233333211 11111
Q ss_pred hhccccCceeeccCch------hHHHHHhhCCCcccCC
Q 013342 334 LSHVAVGGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 334 L~~~~~~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
.....++++++|.|-| .+++|...++|||++.
T Consensus 72 r~tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 72 KASGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred HHhCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 1122344588999965 7888999999999995
No 215
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=45.10 E-value=34 Score=31.97 Aligned_cols=56 Identities=13% Similarity=0.082 Sum_probs=37.4
Q ss_pred HhhccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
+...+++ +|+-||-||++.+.+. ++|++.+-.. + +|. +. +.+++++.+++.+++++
T Consensus 61 ~~~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G-----------~-lGF---Lt-~~~~~~~~~~l~~i~~g 120 (287)
T PRK14077 61 LFKISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG-----------H-LGF---LT-DITVDEAEKFFQAFFQG 120 (287)
T ss_pred cccCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC-----------C-ccc---CC-cCCHHHHHHHHHHHHcC
Confidence 3445777 9999999999988663 6677665321 1 121 11 46678888888888765
No 216
>PHA02754 hypothetical protein; Provisional
Probab=45.10 E-value=34 Score=22.89 Aligned_cols=24 Identities=8% Similarity=0.378 Sum_probs=19.3
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 400 VRRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 400 i~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
|.+++.| ..|++.++++++.+..+
T Consensus 7 i~k~i~e---K~Fke~MRelkD~LSe~ 30 (67)
T PHA02754 7 IPKAIME---KDFKEAMRELKDILSEA 30 (67)
T ss_pred HHHHHHH---hHHHHHHHHHHHHHhhC
Confidence 4455566 68999999999999876
No 217
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=44.94 E-value=1.8e+02 Score=27.72 Aligned_cols=37 Identities=16% Similarity=0.047 Sum_probs=29.4
Q ss_pred EEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCC
Q 013342 3 LVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPP 39 (445)
Q Consensus 3 ~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~ 39 (445)
|.-=|+-|-..-..++|-.|++.|..|.++++++.+.
T Consensus 7 f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhs 43 (322)
T COG0003 7 FTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHS 43 (322)
T ss_pred EecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCc
Confidence 3334788888888899999999999888898865544
No 218
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=44.80 E-value=29 Score=27.88 Aligned_cols=33 Identities=18% Similarity=0.107 Sum_probs=25.3
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
++...++.+=+. ...+.+.|.++|++|.++.++
T Consensus 4 ~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~ 36 (129)
T PF02441_consen 4 LLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSP 36 (129)
T ss_dssp EEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESH
T ss_pred EEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECC
Confidence 445555555555 999999999999999998885
No 219
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=44.03 E-value=1.2e+02 Score=33.52 Aligned_cols=103 Identities=11% Similarity=0.080 Sum_probs=63.3
Q ss_pred EeccHHH---HhhccccCceee--ccCchhH-HHHHhhCCC---cccCCcccchhhhHHHHHhhhe-eeeEeCcccCHHH
Q 013342 326 KWAPQKE---VLSHVAVGGFWS--HCGWNST-LECLCEGVP---MICRPCFGDQRVNARYVSHVWR-TGLELENELEREV 395 (445)
Q Consensus 326 ~~~pq~~---lL~~~~~~~~I~--HgG~gsv-~eal~~GvP---~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~t~~~ 395 (445)
..+|+.+ ++.-+++ ++|| .-|+|-+ .|+++++.- +++++ +=-.-|. . +| -|+.+++ .+.++
T Consensus 446 ~~l~~eeL~AlY~~ADV-~lvTslrDGmNLva~Eyva~~~~~~GvLILS---EfaGaa~---~-L~~~AllVNP-~D~~~ 516 (934)
T PLN03064 446 RSLDFHALCALYAVTDV-ALVTSLRDGMNLVSYEFVACQDSKKGVLILS---EFAGAAQ---S-LGAGAILVNP-WNITE 516 (934)
T ss_pred cCCCHHHHHHHHHhCCE-EEeCccccccCchHHHHHHhhcCCCCCeEEe---CCCchHH---H-hCCceEEECC-CCHHH
Confidence 3466654 6667777 3333 3488855 599999551 22222 2122222 2 33 4677776 68899
Q ss_pred HHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 396 VEKAVRRLMV-GEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 396 l~~ai~~ll~-~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
++++|.+.|+ ++ +.-+++.+++.+.++.. +...-++.|++++
T Consensus 517 vA~AI~~AL~M~~--~Er~~r~~~~~~~V~~~-----d~~~Wa~~fl~~L 559 (934)
T PLN03064 517 VAASIAQALNMPE--EEREKRHRHNFMHVTTH-----TAQEWAETFVSEL 559 (934)
T ss_pred HHHHHHHHHhCCH--HHHHHHHHHHHhhcccC-----CHHHHHHHHHHHH
Confidence 9999999997 42 44556666666666654 6677777777664
No 220
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=43.70 E-value=40 Score=31.59 Aligned_cols=56 Identities=13% Similarity=0.164 Sum_probs=37.9
Q ss_pred HhhccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
+-..+++ +|+-||-||+++++.. ++|++.+-. .+ +| -.. +.+.+++.+++.+++++
T Consensus 60 ~~~~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~-----------G~-lG--FL~--~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 60 IGARADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINH-----------GR-LG--FIT--DIPLDDMQETLPPMLAG 119 (291)
T ss_pred hccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcC-----------CC-cc--ccc--cCCHHHHHHHHHHHHcC
Confidence 3335677 9999999999999874 567766531 12 12 111 46678888888888765
No 221
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=43.60 E-value=31 Score=21.92 Aligned_cols=26 Identities=27% Similarity=0.408 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 013342 392 EREVVEKAVRRLMVGEEGEEMRQRAKNL 419 (445)
Q Consensus 392 t~~~l~~ai~~ll~~~~~~~~~~~a~~l 419 (445)
|++.|.+||..+.++. -++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 5789999999999763 4677766654
No 222
>PRK12342 hypothetical protein; Provisional
Probab=43.23 E-value=43 Score=30.61 Aligned_cols=30 Identities=13% Similarity=0.043 Sum_probs=23.5
Q ss_pred CceEEEEcCCC------CchHHHHHHhCCceEEEcc
Q 013342 101 QIACIIYDEIF------YFPEAAANQLNLQSIILRT 130 (445)
Q Consensus 101 ~~D~vv~D~~~------~~~~~~A~~~giP~v~~~~ 130 (445)
+||+|++-... -.+..+|+.+|+|++....
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 79999975433 3377899999999998554
No 223
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=43.22 E-value=24 Score=30.82 Aligned_cols=27 Identities=19% Similarity=0.221 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 14 PMLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
-+..|+++|.+.||+|+++.+..+.+.
T Consensus 15 Gi~aL~~~L~~~g~~V~VvAP~~~~Sg 41 (196)
T PF01975_consen 15 GIRALAKALSALGHDVVVVAPDSEQSG 41 (196)
T ss_dssp HHHHHHHHHTTTSSEEEEEEESSSTTT
T ss_pred HHHHHHHHHHhcCCeEEEEeCCCCCcC
Confidence 467899999778899999999766554
No 224
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=43.14 E-value=74 Score=33.04 Aligned_cols=27 Identities=11% Similarity=0.258 Sum_probs=22.1
Q ss_pred cCceeeccCch------hHHHHHhhCCCcccCC
Q 013342 339 VGGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 339 ~~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
.+++++|.|-| .+.+|...++|+|++-
T Consensus 79 ~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 79 PGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 33489999966 5789999999999984
No 225
>PRK11519 tyrosine kinase; Provisional
Probab=43.11 E-value=4.3e+02 Score=28.44 Aligned_cols=32 Identities=13% Similarity=0.230 Sum_probs=28.1
Q ss_pred CCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013342 6 SPFQGHMTPMLQLGTILYSNGFSITVVHTHFN 37 (445)
Q Consensus 6 ~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~ 37 (445)
.|+-|-..-...||..|+..|+.|.++-.+..
T Consensus 535 ~~geGKTt~a~nLA~~la~~g~rvLlID~Dlr 566 (719)
T PRK11519 535 SPSIGKTFVCANLAAVISQTNKRVLLIDCDMR 566 (719)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 57889999999999999999999999977544
No 226
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=42.96 E-value=24 Score=31.09 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=29.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
|++..+|+.|-....-.||++|.+++|+|..++.
T Consensus 4 iIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 4 IILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred EEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 3566679999999999999999999999987765
No 227
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=42.29 E-value=43 Score=30.67 Aligned_cols=31 Identities=13% Similarity=0.006 Sum_probs=24.0
Q ss_pred CceEEEEcCCC------CchHHHHHHhCCceEEEccc
Q 013342 101 QIACIIYDEIF------YFPEAAANQLNLQSIILRTT 131 (445)
Q Consensus 101 ~~D~vv~D~~~------~~~~~~A~~~giP~v~~~~~ 131 (445)
+||+|++-... .-+..+|+.+|+|++.+...
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 79999974433 35778999999999986553
No 228
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=41.99 E-value=41 Score=31.53 Aligned_cols=57 Identities=16% Similarity=0.186 Sum_probs=39.8
Q ss_pred HHhhccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 332 EVLSHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 332 ~lL~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+...+++ +|+=||-||++.+.+. ++|++.|-.. + +| -.- +.+++++.+++.+++++
T Consensus 60 ~~~~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G-----------~-lG--FLt--~~~~~~~~~~l~~i~~g 120 (292)
T PRK01911 60 ELDGSADM--VISIGGDGTFLRTATYVGNSNIPILGINTG-----------R-LG--FLA--TVSKEEIEETIDELLNG 120 (292)
T ss_pred hcccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecC-----------C-CC--ccc--ccCHHHHHHHHHHHHcC
Confidence 34445777 9999999999999874 6787766331 1 12 111 46778888899888876
No 229
>PRK04940 hypothetical protein; Provisional
Probab=41.55 E-value=53 Score=28.21 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=26.9
Q ss_pred CceEEEEcCCC-CchHHHHHHhCCceEEEccch
Q 013342 101 QIACIIYDEIF-YFPEAAANQLNLQSIILRTTS 132 (445)
Q Consensus 101 ~~D~vv~D~~~-~~~~~~A~~~giP~v~~~~~~ 132 (445)
+++++|-.... +++..+|+++|+|.|.++|..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCCC
Confidence 45788877666 889999999999999988865
No 230
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=41.44 E-value=21 Score=32.47 Aligned_cols=22 Identities=18% Similarity=0.344 Sum_probs=17.9
Q ss_pred HHHHHHHHHhCCCeEEEEeCCC
Q 013342 15 MLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
.-.|+++|+++||+|+++++..
T Consensus 22 ~~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 22 VGSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp HHHHHHHHHHTT-EEEEEEE-T
T ss_pred HHHHHHHHHhcCCeEEEEEccc
Confidence 5679999999999999999853
No 231
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=41.21 E-value=41 Score=26.69 Aligned_cols=35 Identities=14% Similarity=0.274 Sum_probs=31.9
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
+++.+.++-.|-.-..-++.-|..+|++|.+....
T Consensus 2 vv~~~~~gd~H~lG~~~~~~~l~~~G~~vi~lG~~ 36 (122)
T cd02071 2 ILVAKPGLDGHDRGAKVIARALRDAGFEVIYTGLR 36 (122)
T ss_pred EEEEecCCChhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 57888999999999999999999999999998874
No 232
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=40.21 E-value=1.4e+02 Score=29.20 Aligned_cols=60 Identities=20% Similarity=0.196 Sum_probs=38.7
Q ss_pred eeeccCchhHHHHHhhCCCccc--CCcccch------hhhHHHHHhhheeeeEeCc--ccCHHHHHHHHHHHhcCC
Q 013342 342 FWSHCGWNSTLECLCEGVPMIC--RPCFGDQ------RVNARYVSHVWRTGLELEN--ELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 342 ~I~HgG~gsv~eal~~GvP~v~--~P~~~DQ------~~na~~v~~~~G~g~~~~~--~~t~~~l~~ai~~ll~~~ 407 (445)
+-| -|+.++..++.+|.|+-. ++..+|- -.|+.++.+. .++. -.+.+++..+|.++++|+
T Consensus 248 VEt-~~a~~f~~sl~~g~~V~lp~i~s~AdglaV~~Vg~~tf~~a~~-----~~d~vvvV~~~ei~aaI~~l~ede 317 (457)
T KOG1250|consen 248 VET-EGAHSFNASLKAGKPVTLPKITSLADGLAVKTVGENTFELAQK-----LVDRVVVVEDDEIAAAILRLFEDE 317 (457)
T ss_pred Eee-cCcHHHHHHHhcCCeeecccccchhcccccchhhHHHHHHHHh-----cCceEEEeccHHHHHHHHHHHHhh
Confidence 444 467889999999988632 2223332 2345555553 2222 578899999999999984
No 233
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=40.20 E-value=2.2e+02 Score=23.81 Aligned_cols=18 Identities=17% Similarity=0.305 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013342 410 EEMRQRAKNLKEEIELCI 427 (445)
Q Consensus 410 ~~~~~~a~~l~~~~~~~~ 427 (445)
+.++++.+..++++++.+
T Consensus 131 ~~l~~kl~~~r~~~~~~v 148 (156)
T TIGR01162 131 PELAEKLKEYRENQKEEV 148 (156)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 677887777777777653
No 234
>PRK09620 hypothetical protein; Provisional
Probab=39.65 E-value=84 Score=28.22 Aligned_cols=20 Identities=20% Similarity=0.213 Sum_probs=17.8
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 013342 16 LQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 16 l~La~~L~~~Gh~Vt~~~~~ 35 (445)
..||++|.++|++|+++...
T Consensus 33 s~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 33 RIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred HHHHHHHHHCCCeEEEEeCC
Confidence 68999999999999999764
No 235
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=39.61 E-value=21 Score=31.11 Aligned_cols=32 Identities=16% Similarity=0.037 Sum_probs=23.8
Q ss_pred CceEEEEcCCC--CchHHHHHHhCCceEEEccch
Q 013342 101 QIACIIYDEIF--YFPEAAANQLNLQSIILRTTS 132 (445)
Q Consensus 101 ~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~ 132 (445)
.||+||.-... ..+..=|.++|||+|.+.-+.
T Consensus 127 ~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 127 LPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 89999854433 455667888999999987655
No 236
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.50 E-value=47 Score=31.34 Aligned_cols=56 Identities=21% Similarity=0.223 Sum_probs=39.8
Q ss_pred HhhccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
+...+++ +|+=||-||++.+.+. ++|++.|.. -+ +|-.. +..++++.+++.+++++
T Consensus 69 ~~~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~-----------G~---lGFL~--~~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 69 AADGCEL--VLVLGGDGTILRAAELARAADVPVLGVNL-----------GH---VGFLA--EAEAEDLDEAVERVVDR 128 (306)
T ss_pred cccCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEec-----------CC---Cceec--cCCHHHHHHHHHHHHcC
Confidence 3345677 9999999999998764 778877754 12 22222 45678888888888876
No 237
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=39.49 E-value=3.8e+02 Score=28.60 Aligned_cols=95 Identities=15% Similarity=0.168 Sum_probs=56.9
Q ss_pred CCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHH-hcchHHHHHH
Q 013342 7 PFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVSTGINILITNLLNV-NCQAPFFECM 85 (445)
Q Consensus 7 p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 85 (445)
+..|=..-.+.|++.|.++|.+|.++=+-.. + | ... . .... .+.. .....+..++
T Consensus 12 t~~GKT~vslgL~~~L~~~G~~Vg~fKPi~~--------~------p--~~~-----~-~~~~--~~~~~~~~~~~~~I~ 67 (684)
T PRK05632 12 TGVGLTSVSLGLMRALERKGVKVGFFKPIAQ--------P------P--LTM-----S-EVEA--LLASGQLDELLEEIV 67 (684)
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEEEeCCccc--------C------C--CCH-----H-HHHH--HHhccCChHHHHHHH
Confidence 4678888899999999999999999754111 1 1 000 0 1101 1111 1122233344
Q ss_pred HHHHhhccCCCCCCCCceEEEEcCCCC---------chHHHHHHhCCceEEEccch
Q 013342 86 VRMMEQQQQHPAGDDQIACIIYDEIFY---------FPEAAANQLNLQSIILRTTS 132 (445)
Q Consensus 86 ~~~~~~~~~~~~~~~~~D~vv~D~~~~---------~~~~~A~~~giP~v~~~~~~ 132 (445)
+.+.+... +.|+||+|...+ ....+|+.++.|++.+....
T Consensus 68 ~~~~~l~~-------~~D~VLIEGa~~~~~~~~~~~~na~iA~~L~~pVILV~~~~ 116 (684)
T PRK05632 68 ARYHALAK-------DCDVVLVEGLDPTRKHPFEFSLNAEIAKNLGAEVVLVSSGG 116 (684)
T ss_pred HHHHHhcc-------CCCEEEEeCcCCCCcCcccCchHHHHHHHhCCCEEEEECCC
Confidence 44433222 789999887542 23567999999999988764
No 238
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=39.32 E-value=28 Score=29.95 Aligned_cols=19 Identities=11% Similarity=0.137 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCeEEEEeC
Q 013342 16 LQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 16 l~La~~L~~~Gh~Vt~~~~ 34 (445)
-.|.++..+|||+||-++-
T Consensus 14 s~i~~EA~~RGHeVTAivR 32 (211)
T COG2910 14 SRILKEALKRGHEVTAIVR 32 (211)
T ss_pred HHHHHHHHhCCCeeEEEEe
Confidence 3678999999999999876
No 239
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.23 E-value=44 Score=31.30 Aligned_cols=57 Identities=11% Similarity=0.047 Sum_probs=39.2
Q ss_pred HHhhccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 332 EVLSHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 332 ~lL~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+...+++ +|+=||-||++.+.+. ++|++.+-. .+ +|.-. +++++++.+++.+++++
T Consensus 59 ~~~~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~-----------G~-lGFl~----~~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 59 EIGQQADL--AIVVGGDGNMLGAARVLARYDIKVIGINR-----------GN-LGFLT----DLDPDNALQQLSDVLEG 119 (292)
T ss_pred hcCCCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEEC-----------CC-CCccc----ccCHHHHHHHHHHHHcC
Confidence 33345777 9999999999999753 567766532 11 22211 45678899999999876
No 240
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=39.15 E-value=1.1e+02 Score=31.91 Aligned_cols=64 Identities=14% Similarity=0.091 Sum_probs=38.3
Q ss_pred CceeeccCch------hHHHHHhhCCCcccCCc-------------ccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHH
Q 013342 340 GGFWSHCGWN------STLECLCEGVPMICRPC-------------FGDQRVNARYVSHVWRTGLELEN-ELEREVVEKA 399 (445)
Q Consensus 340 ~~~I~HgG~g------sv~eal~~GvP~v~~P~-------------~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~a 399 (445)
+++++|.|-| .+.+|.+.++|+|++.- ..||...++-+.+ ....+.. +--++.|.+|
T Consensus 65 gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~G~~~~~~~~~~~~q~~d~~~l~~~~tk---~s~~v~~~~~i~~~i~~A 141 (586)
T PRK06276 65 GVCVATSGPGATNLVTGIATAYADSSPVIALTGQVPTKLIGNDAFQEIDALGIFMPITK---HNFQIKKPEEIPEIFRAA 141 (586)
T ss_pred EEEEECCCccHHHHHHHHHHHHhcCCCEEEEeCCCCccccCCCCCccccHhhHHhhhcc---eEEecCCHHHHHHHHHHH
Confidence 3488898855 78899999999999842 1255555544443 1223332 2234556666
Q ss_pred HHHHhcC
Q 013342 400 VRRLMVG 406 (445)
Q Consensus 400 i~~ll~~ 406 (445)
++..++.
T Consensus 142 ~~~A~~~ 148 (586)
T PRK06276 142 FEIAKTG 148 (586)
T ss_pred HHHhcCC
Confidence 6655543
No 241
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=39.12 E-value=1.6e+02 Score=26.86 Aligned_cols=58 Identities=12% Similarity=0.059 Sum_probs=33.9
Q ss_pred cHHHHhhccccCceeecc----CchhHHHHHhhCCCcccCCcccchhhhHHHH-HhhheeeeEeCc
Q 013342 329 PQKEVLSHVAVGGFWSHC----GWNSTLECLCEGVPMICRPCFGDQRVNARYV-SHVWRTGLELEN 389 (445)
Q Consensus 329 pq~~lL~~~~~~~~I~Hg----G~gsv~eal~~GvP~v~~P~~~DQ~~na~~v-~~~~G~g~~~~~ 389 (445)
...+++..+|+ +|.=+ ..--+..|+.+|+|+|+-|....+....+.. +.+ ++++.+..
T Consensus 53 dl~~ll~~~Dv--Vid~t~p~~~~~~~~~al~~G~~vvigttG~s~~~~~~l~~aa~-~~~v~~s~ 115 (257)
T PRK00048 53 DLEAVLADADV--LIDFTTPEATLENLEFALEHGKPLVIGTTGFTEEQLAELEEAAK-KIPVVIAP 115 (257)
T ss_pred CHHHhccCCCE--EEECCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhc-CCCEEEEC
Confidence 44556666776 55222 2345566899999999988654433322222 223 77777654
No 242
>PRK13768 GTPase; Provisional
Probab=39.04 E-value=76 Score=28.96 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=30.9
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFN 37 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~ 37 (445)
+++...++.|-..-...++..|..+|++|.++..+..
T Consensus 5 i~v~G~~G~GKTt~~~~~~~~l~~~g~~v~~i~~D~~ 41 (253)
T PRK13768 5 VFFLGTAGSGKTTLTKALSDWLEEQGYDVAIVNLDPA 41 (253)
T ss_pred EEEECCCCccHHHHHHHHHHHHHhcCCceEEEECCCc
Confidence 3566678889888899999999999999999976543
No 243
>COG3563 KpsC Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]
Probab=38.68 E-value=1.4e+02 Score=29.89 Aligned_cols=85 Identities=16% Similarity=0.112 Sum_probs=50.0
Q ss_pred ChhhHHHHHHHHHhCCCCEEEEEC-CCCCCCCCccCCchHHHHHHhcCCcEEE-EeccHHHHhhccccC-ceeeccCchh
Q 013342 274 DKKEPEEMAWGLVNSKQPFLWVIR-PSSNNAPEGIDLLPEVLAEAVQENGCIV-KWAPQKEVLSHVAVG-GFWSHCGWNS 350 (445)
Q Consensus 274 ~~~~~~~~~~al~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~pq~~lL~~~~~~-~~I~HgG~gs 350 (445)
...++..+-.|+.+.+.--||+-. ++..-|.. .+.+..+. .+.++++. +-..--.+|.+.|-. |+-+|.|
T Consensus 165 ~~~~l~m~~~ai~enp~a~i~~kthpdvl~gkk-qg~lt~~~---~~~r~~ll~edfnpisll~~~dkvy~~ts~mg--- 237 (671)
T COG3563 165 ASTFLLMFQTAINENPQADIWVKTHPDVLCGKK-QGYLTQLS---QQHRVHLLAEDFNPISLLQNVDKVYCVTSQMG--- 237 (671)
T ss_pred hhHHHHHHHHHHhcCCcccEEEEeCCchhcCcc-cchhhhhc---cCceEEEecccCChHHHHHhcceeEEeecccc---
Confidence 345566678888888887778643 33222221 12332221 34455544 444555677776642 2344444
Q ss_pred HHHHHhhCCCcccCCc
Q 013342 351 TLECLCEGVPMICRPC 366 (445)
Q Consensus 351 v~eal~~GvP~v~~P~ 366 (445)
.|||.+|+|+++...
T Consensus 238 -feall~~~~~~~fg~ 252 (671)
T COG3563 238 -FEALLCGKPLTTFGL 252 (671)
T ss_pred -HHHHhcCCceeeecc
Confidence 699999999998765
No 244
>TIGR00624 tag DNA-3-methyladenine glycosylase I. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=38.54 E-value=1e+02 Score=26.52 Aligned_cols=61 Identities=15% Similarity=0.171 Sum_probs=44.0
Q ss_pred cCCcccchhhhHHHHHhhheeeeEeCc-------------ccCHHHHH----HHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 013342 363 CRPCFGDQRVNARYVSHVWRTGLELEN-------------ELEREVVE----KAVRRLMVGEEGEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 363 ~~P~~~DQ~~na~~v~~~~G~g~~~~~-------------~~t~~~l~----~ai~~ll~~~~~~~~~~~a~~l~~~~~~ 425 (445)
.+|.+.||......+-+.+.+|+.... .++++.++ +.|.++|+| +.+-+|=+|+.+.+.+
T Consensus 21 G~p~~dd~~LFE~L~Le~fQAGLSW~tIL~Kr~~fr~aF~~Fd~~~VA~~~e~~ie~L~~d---~~IIRnr~KI~Avi~N 97 (179)
T TIGR00624 21 GVPLRDSVALFERMSLEGFQAGLSWITVLRKRENYRRAFSGFDIVKVARMTDADVERLLQD---DGIIRNRGKIEATIAN 97 (179)
T ss_pred CCcCcCCHHHHHHHHHHHHhCcCCHHHHHHhHHHHHHHHcCCCHHHHhCCCHHHHHHHhcC---ccchhhHHHHHHHHHH
Confidence 456788998888777554577776621 35566654 578889999 6788888888888777
Q ss_pred H
Q 013342 426 C 426 (445)
Q Consensus 426 ~ 426 (445)
+
T Consensus 98 A 98 (179)
T TIGR00624 98 A 98 (179)
T ss_pred H
Confidence 6
No 245
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=38.54 E-value=62 Score=27.18 Aligned_cols=34 Identities=18% Similarity=0.063 Sum_probs=26.2
Q ss_pred eEEEEecccccCChhhHHHHHHHHHhCCCCEEEE
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWV 295 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~ 295 (445)
.+|+|+||-.....+.++..+.++.+.+.--++.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~ 36 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVA 36 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEE
Confidence 6999999998766677888888888877533333
No 246
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=38.52 E-value=43 Score=29.30 Aligned_cols=35 Identities=20% Similarity=0.160 Sum_probs=28.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
+++.+.++-.|-....-++..|..+|++|+++...
T Consensus 85 vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~ 119 (201)
T cd02070 85 VVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRD 119 (201)
T ss_pred EEEEecCCccchHHHHHHHHHHHHCCCEEEECCCC
Confidence 46777888889988888888888889999877654
No 247
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=38.44 E-value=45 Score=31.29 Aligned_cols=56 Identities=18% Similarity=0.142 Sum_probs=39.3
Q ss_pred HhhccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
+...+|+ +|+=||-||++.+.+. ++|++.+-. .+ +|. .. +++++++.+++.+++++
T Consensus 65 ~~~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~-----------G~-lGF--L~--~~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 65 LGQYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQ-----------GH-LGF--LT--QIPREYMTDKLLPVLEG 124 (296)
T ss_pred cCcCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEec-----------CC-CeE--ee--ccCHHHHHHHHHHHHcC
Confidence 3345777 9999999999999753 678877642 12 222 21 46778888888888876
No 248
>TIGR00708 cobA cob(I)alamin adenosyltransferase. Alternate name: corrinoid adenosyltransferase.
Probab=38.35 E-value=2.5e+02 Score=23.94 Aligned_cols=55 Identities=15% Similarity=0.225 Sum_probs=37.5
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC----CC--CCCCCCceEEEcCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP----PN--PSNHPEFNFQSIPDGL 56 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~----~~--~~~~~~~~~~~l~~~~ 56 (445)
|.+++..+.|-..-.+.+|-+.+.+|+.|.++-.-... +. .... ++.+.....++
T Consensus 8 i~v~~g~GkGKtt~a~g~a~ra~~~g~~v~ivQFlKg~~~~GE~~~l~~~-~~~~~~~g~g~ 68 (173)
T TIGR00708 8 IIVHTGNGKGKTTAAFGMALRALGHGKKVGVIQFIKGAWPNGERAAFEPH-GVEFQVMGTGF 68 (173)
T ss_pred EEEECCCCCChHHHHHHHHHHHHHCCCeEEEEEEecCCcccChHHHHHhc-CcEEEECCCCC
Confidence 35677789999999999999999999999876431111 11 2122 67888777543
No 249
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=38.33 E-value=98 Score=30.13 Aligned_cols=70 Identities=14% Similarity=0.129 Sum_probs=49.1
Q ss_pred HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeE-eCc-ccCHHHHHHHHHHHhcCC
Q 013342 331 KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLE-LEN-ELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 331 ~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~-~~~-~~t~~~l~~ai~~ll~~~ 407 (445)
..++.+|++ +|. .=+=++.-|+..|+|.+++-+ |+.+....++ +|+--. ++. .++.+.+.+.+.+.+++.
T Consensus 280 ~~~l~~~dl--~Vg-~R~HsaI~al~~g~p~i~i~Y---~~K~~~l~~~-~gl~~~~~~i~~~~~~~l~~~~~e~~~~~ 351 (385)
T COG2327 280 GGILAACDL--IVG-MRLHSAIMALAFGVPAIAIAY---DPKVRGLMQD-LGLPGFAIDIDPLDAEILSAVVLERLTKL 351 (385)
T ss_pred HHHhccCce--EEe-ehhHHHHHHHhcCCCeEEEee---cHHHHHHHHH-cCCCcccccCCCCchHHHHHHHHHHHhcc
Confidence 337778886 663 556688889999999999855 3444455555 455422 223 689999999999998864
No 250
>PRK10637 cysG siroheme synthase; Provisional
Probab=38.20 E-value=1.4e+02 Score=30.01 Aligned_cols=147 Identities=10% Similarity=0.034 Sum_probs=80.8
Q ss_pred hhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHh-cCCcEEEEeccHH
Q 013342 253 WLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAV-QENGCIVKWAPQK 331 (445)
Q Consensus 253 wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~~pq~ 331 (445)
|++ -.+++++.|..|.+. .+=+..|.+.+.++.++. + .+.+.+.+.. .+++....---+.
T Consensus 7 ~~~-l~~~~vlvvGgG~vA-------~rk~~~ll~~ga~v~vis-p----------~~~~~~~~l~~~~~i~~~~~~~~~ 67 (457)
T PRK10637 7 FCQ-LRDRDCLLVGGGDVA-------ERKARLLLDAGARLTVNA-L----------AFIPQFTAWADAGMLTLVEGPFDE 67 (457)
T ss_pred EEE-cCCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEEc-C----------CCCHHHHHHHhCCCEEEEeCCCCh
Confidence 455 456779999888775 233455556677766654 1 1223332222 2455444322244
Q ss_pred HHhhccccCceeeccCchhHHHHHh-----hCCCcccCCcccchhhhH-----HHHHhhheeeeEeCc----ccCHHHHH
Q 013342 332 EVLSHVAVGGFWSHCGWNSTLECLC-----EGVPMICRPCFGDQRVNA-----RYVSHVWRTGLELEN----ELEREVVE 397 (445)
Q Consensus 332 ~lL~~~~~~~~I~HgG~gsv~eal~-----~GvP~v~~P~~~DQ~~na-----~~v~~~~G~g~~~~~----~~t~~~l~ 397 (445)
.-+..+.+ +|.--+--.+++.++ .|+++-++ |++..+ ..+.+. ++-+.+.. ..-...|+
T Consensus 68 ~dl~~~~l--v~~at~d~~~n~~i~~~a~~~~~lvN~~----d~~~~~~f~~pa~~~~g-~l~iaisT~G~sP~~a~~lr 140 (457)
T PRK10637 68 SLLDTCWL--AIAATDDDAVNQRVSEAAEARRIFCNVV----DAPKAASFIMPSIIDRS-PLMVAVSSGGTSPVLARLLR 140 (457)
T ss_pred HHhCCCEE--EEECCCCHHHhHHHHHHHHHcCcEEEEC----CCcccCeEEEeeEEecC-CEEEEEECCCCCcHHHHHHH
Confidence 55677776 777666656666544 45554333 544332 334443 44444432 23446788
Q ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 398 KAVRRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 398 ~ai~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
+.|.+++..+ ...+.+.+.++++.+++.
T Consensus 141 ~~ie~~~~~~-~~~~~~~~~~~R~~~k~~ 168 (457)
T PRK10637 141 EKLESLLPQH-LGQVAKYAGQLRGRVKQQ 168 (457)
T ss_pred HHHHHhcchh-HHHHHHHHHHHHHHHHHh
Confidence 8888887532 245666677777777665
No 251
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=37.95 E-value=2.7e+02 Score=27.44 Aligned_cols=135 Identities=13% Similarity=0.149 Sum_probs=76.6
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCC-cEEEEe-------ccHH
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQEN-GCIVKW-------APQK 331 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n-~~~~~~-------~pq~ 331 (445)
+.+++.-.||.... ..-.+++.|.+.+.++-++.+... ...+.....+...++ ++...| +.|-
T Consensus 7 k~IllgvTGsiaa~---k~~~lv~~L~~~g~~V~vv~T~~A------~~fi~~~~l~~l~~~~V~~~~~~~~~~~~~~hi 77 (399)
T PRK05579 7 KRIVLGVSGGIAAY---KALELVRRLRKAGADVRVVMTEAA------KKFVTPLTFQALSGNPVSTDLWDPAAEAAMGHI 77 (399)
T ss_pred CeEEEEEeCHHHHH---HHHHHHHHHHhCCCEEEEEECHhH------HHHHhHHHHHHhhCCceEccccccccCCCcchh
Confidence 44666666766431 234467777777877655553321 011111112333444 332222 2344
Q ss_pred HHhhccccCceeeccCchhHHHH-------------HhhCCCcccCCccc----c---hhhhHHHHHhhheeeeEeC---
Q 013342 332 EVLSHVAVGGFWSHCGWNSTLEC-------------LCEGVPMICRPCFG----D---QRVNARYVSHVWRTGLELE--- 388 (445)
Q Consensus 332 ~lL~~~~~~~~I~HgG~gsv~ea-------------l~~GvP~v~~P~~~----D---Q~~na~~v~~~~G~g~~~~--- 388 (445)
++...+|+ .+|--|-+||+... +.+++|++++|-.. . -..|-.++.+ +|+-+.-.
T Consensus 78 ~l~~~aD~-~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~-~G~~ii~P~~g 155 (399)
T PRK05579 78 ELAKWADL-VLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATLRS-RGVEIIGPASG 155 (399)
T ss_pred hcccccCE-EEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHHHH-CCCEEECCCCc
Confidence 45555565 56777777766543 66799999999533 2 2345666677 57766543
Q ss_pred ----------cccCHHHHHHHHHHHhc
Q 013342 389 ----------NELEREVVEKAVRRLMV 405 (445)
Q Consensus 389 ----------~~~t~~~l~~ai~~ll~ 405 (445)
+-.++++|...+.+.+.
T Consensus 156 ~la~~~~g~gr~~~~~~I~~~~~~~~~ 182 (399)
T PRK05579 156 RLACGDVGPGRMAEPEEIVAAAERALS 182 (399)
T ss_pred cccCCCcCCCCCCCHHHHHHHHHHHhh
Confidence 13678889888887774
No 252
>PLN02929 NADH kinase
Probab=37.48 E-value=40 Score=31.62 Aligned_cols=66 Identities=14% Similarity=0.115 Sum_probs=43.6
Q ss_pred hccccCceeeccCchhHHHHHhh---CCCcccCCccc------chhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhc
Q 013342 335 SHVAVGGFWSHCGWNSTLECLCE---GVPMICRPCFG------DQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMV 405 (445)
Q Consensus 335 ~~~~~~~~I~HgG~gsv~eal~~---GvP~v~~P~~~------DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~ 405 (445)
..+|+ +|+-||-||++.+.+. ++|++.|=..- .+..+... +. .-.|-.. ..+.+++.+++.++++
T Consensus 63 ~~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~-r~lGfL~--~~~~~~~~~~L~~il~ 136 (301)
T PLN02929 63 RDVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD-AR-RSTGHLC--AATAEDFEQVLDDVLF 136 (301)
T ss_pred CCCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc-cc-cCccccc--cCCHHHHHHHHHHHHc
Confidence 45677 9999999999998553 67887775531 12333322 11 1244333 4678999999999998
Q ss_pred C
Q 013342 406 G 406 (445)
Q Consensus 406 ~ 406 (445)
+
T Consensus 137 g 137 (301)
T PLN02929 137 G 137 (301)
T ss_pred C
Confidence 6
No 253
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=37.40 E-value=85 Score=26.94 Aligned_cols=28 Identities=21% Similarity=0.162 Sum_probs=22.6
Q ss_pred CceEEEEcCC--CCchHHHHHHhCCceEEE
Q 013342 101 QIACIIYDEI--FYFPEAAANQLNLQSIIL 128 (445)
Q Consensus 101 ~~D~vv~D~~--~~~~~~~A~~~giP~v~~ 128 (445)
++|.|++=.. +..|..+|.++|+|+|.+
T Consensus 53 ~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~v 82 (179)
T COG0503 53 GIDKIVTIEARGIPLAAAVALELGVPFVPV 82 (179)
T ss_pred CCCEEEEEccccchhHHHHHHHhCCCEEEE
Confidence 6899995543 367888999999999983
No 254
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=37.18 E-value=49 Score=30.24 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=28.2
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
++|+-.|+.|-..=..+||.+|.++|+.|+|++.
T Consensus 108 l~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~ 141 (254)
T COG1484 108 LVLLGPPGVGKTHLAIAIGNELLKAGISVLFITA 141 (254)
T ss_pred EEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEH
Confidence 4667777878777788999999988999999876
No 255
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=37.00 E-value=20 Score=29.92 Aligned_cols=20 Identities=25% Similarity=0.381 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 013342 16 LQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 16 l~La~~L~~~Gh~Vt~~~~~ 35 (445)
.++|..|.++||+|++.+..
T Consensus 12 ~AlA~~la~~g~~V~l~~~~ 31 (157)
T PF01210_consen 12 TALAALLADNGHEVTLWGRD 31 (157)
T ss_dssp HHHHHHHHHCTEEEEEETSC
T ss_pred HHHHHHHHHcCCEEEEEecc
Confidence 47899999999999999885
No 256
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=36.88 E-value=57 Score=32.81 Aligned_cols=22 Identities=9% Similarity=0.176 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCeEEEEeCCC
Q 013342 15 MLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
-.+||+++..+|++||+++++.
T Consensus 285 G~alA~aa~~~GA~VtlI~Gp~ 306 (475)
T PRK13982 285 GFAIAAAAAAAGAEVTLISGPV 306 (475)
T ss_pred HHHHHHHHHHCCCcEEEEeCCc
Confidence 4689999999999999999754
No 257
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=36.81 E-value=1.3e+02 Score=28.51 Aligned_cols=96 Identities=6% Similarity=0.015 Sum_probs=59.2
Q ss_pred CCceEEEEecccc--c--CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcE-EEEe--ccH-
Q 013342 259 PESVIYVSLGSVA--S--MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGC-IVKW--APQ- 330 (445)
Q Consensus 259 ~~~~v~vs~Gs~~--~--~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~-~~~~--~pq- 330 (445)
+++.|.+.-|+.. . .+.+.+.++++-+.+.+.++++.-++. + ...-+.+.+..++++. +.+- +.+
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~-----e--~~~~~~i~~~~~~~~~~l~g~~sL~el 245 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK-----D--HPAGNEIEALLPGELRNLAGETSLDEA 245 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh-----h--HHHHHHHHHhCCcccccCCCCCCHHHH
Confidence 4678888887742 2 566778888888877666766553221 0 1111222222233322 2232 233
Q ss_pred HHHhhccccCceeeccCchhHHHHHhhCCCcccC
Q 013342 331 KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICR 364 (445)
Q Consensus 331 ~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~ 364 (445)
..++.++++ +|+ .-.|-++=|.+.|+|+|++
T Consensus 246 ~ali~~a~l--~I~-~DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 246 VDLIALAKA--VVT-NDSGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHhCCE--EEe-eCCHHHHHHHHcCCCEEEE
Confidence 448999998 997 6678899999999999875
No 258
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=36.33 E-value=69 Score=29.44 Aligned_cols=27 Identities=15% Similarity=0.107 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 13 TPMLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 13 ~p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
--+..|+++|.+.| +|+++.+....+.
T Consensus 14 pGi~aL~~al~~~g-~V~VvAP~~eqSg 40 (266)
T PRK13934 14 PGLRLLYEFVSPLG-EVDVVAPETPKSA 40 (266)
T ss_pred HHHHHHHHHHHhCC-cEEEEccCCCCcc
Confidence 34778999998888 7999988655543
No 259
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=36.33 E-value=43 Score=29.24 Aligned_cols=33 Identities=9% Similarity=-0.087 Sum_probs=24.6
Q ss_pred EcCCCccChHH-HHHHHHHHHhCCCeEEEEeCCC
Q 013342 4 VPSPFQGHMTP-MLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 4 ~~~p~~GH~~p-~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
+...+.+..+- ...|++.|.++||+|.++.++.
T Consensus 10 lgVTGsiaa~k~a~~lir~L~k~G~~V~vv~T~a 43 (196)
T PRK08305 10 FGLTGSHCTYDEVMPEIEKLVDEGAEVTPIVSYT 43 (196)
T ss_pred EEEcCHHHHHHHHHHHHHHHHhCcCEEEEEECHh
Confidence 33334445555 6899999999999999988843
No 260
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=36.19 E-value=84 Score=26.36 Aligned_cols=97 Identities=11% Similarity=0.019 Sum_probs=52.8
Q ss_pred hchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEe-c
Q 013342 250 CISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKW-A 328 (445)
Q Consensus 250 l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~-~ 328 (445)
+-+||.+. ....++-| ....+....++..+.+-+++=++..... ..+ ...+.....++ .
T Consensus 23 lg~~La~~---g~~lv~Gg-----~~GlM~a~a~ga~~~gg~viGVlp~~l~---------~~~---~~~~~~i~~~~~~ 82 (159)
T TIGR00725 23 LGKELAKK---GHILINGG-----RTGVMEAVSKGAREAGGLVVGILPDEDF---------AGN---PYLTIKVKTGMNF 82 (159)
T ss_pred HHHHHHHC---CCEEEcCC-----chhHHHHHHHHHHHCCCeEEEECChhhc---------cCC---CCceEEEECCCcc
Confidence 55667532 34556633 2237777887777777666555432100 000 00011112233 3
Q ss_pred cHHHHhhccccCceeeccCchhHHH---HHhhCCCcccCCc
Q 013342 329 PQKEVLSHVAVGGFWSHCGWNSTLE---CLCEGVPMICRPC 366 (445)
Q Consensus 329 pq~~lL~~~~~~~~I~HgG~gsv~e---al~~GvP~v~~P~ 366 (445)
+-+.+|...+-..++--||.||.-| ++.+++|+++++.
T Consensus 83 ~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 83 ARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred hHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 4455554433335666789998765 5889999999885
No 261
>COG2210 Peroxiredoxin family protein [General function prediction only]
Probab=36.13 E-value=57 Score=26.52 Aligned_cols=32 Identities=19% Similarity=0.217 Sum_probs=28.1
Q ss_pred EEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 3 LVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 3 ~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
++.++..--++|..-++...++.|++|+++.+
T Consensus 8 Il~SG~~dk~~~a~iias~A~A~G~EV~VF~T 39 (137)
T COG2210 8 ILASGTLDKAYAALIIASGAAAMGYEVTVFFT 39 (137)
T ss_pred EEeCCCHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 56667777889999999999999999999887
No 262
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.96 E-value=3.2e+02 Score=25.51 Aligned_cols=110 Identities=15% Similarity=0.140 Sum_probs=61.5
Q ss_pred cEEEEeccHHH---HhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhH--HHHHhhheeeeEeCc--ccCHH
Q 013342 322 GCIVKWAPQKE---VLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNA--RYVSHVWRTGLELEN--ELERE 394 (445)
Q Consensus 322 ~~~~~~~pq~~---lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na--~~v~~~~G~g~~~~~--~~t~~ 394 (445)
+..++|+||+. +|--||+ .+| =|--|...|..+|+|.+= +..-|..|+ +.++.. +++ ..=+.
T Consensus 240 vvklPFvpqddyd~LL~lcD~-n~V--RGEDSFVRAq~agkPflW--HIYpQdentHl~KLeaF------ldky~~~lp~ 308 (370)
T COG4394 240 VVKLPFVPQDDYDELLWLCDF-NLV--RGEDSFVRAQLAGKPFLW--HIYPQDENTHLAKLEAF------LDKYCPFLPP 308 (370)
T ss_pred EEEecCCcHhHHHHHHHhccc-cee--ecchHHHHHHHcCCCcEE--EecCCccccHHHHHHHH------HHHhCCCCCH
Confidence 34569999865 8888887 344 477899999999999863 223344444 333331 111 11222
Q ss_pred HHHHHHHHHh--------cCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 395 VVEKAVRRLM--------VGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 395 ~l~~ai~~ll--------~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
..++++++.. +++. +-+.++...+++..++..+.-+..-+.+++++..
T Consensus 309 ~~a~alrt~~~~~N~~~ls~~w-~~f~~~~~~~r~~a~~wa~~l~~~~dlaekLvaF 364 (370)
T COG4394 309 NTAKALRTFWIAWNAGRLSDDW-SYFFKNLKEWREHAKKWANHLIKNPDLAEKLVAF 364 (370)
T ss_pred HHHHHHHHHHHHhcCCcccccH-HHHHHhhHHHHHHHHHHHHHHccCccHHHHHHHH
Confidence 3334444433 1222 3456666666666666555555555566665543
No 263
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=35.73 E-value=51 Score=28.79 Aligned_cols=37 Identities=19% Similarity=0.092 Sum_probs=28.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFN 37 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~ 37 (445)
+++.+.++-.|-....-++..|..+|++|+++.....
T Consensus 87 vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp 123 (197)
T TIGR02370 87 VVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVP 123 (197)
T ss_pred EEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCC
Confidence 4677778888888888888888888888888876433
No 264
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=35.53 E-value=62 Score=30.37 Aligned_cols=54 Identities=15% Similarity=0.108 Sum_probs=39.0
Q ss_pred hccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 335 SHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 335 ~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
..+++ +|+=||-||+++++.. ++|++.+... + +|. +. +.+++++.++|.+++++
T Consensus 61 ~~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G-----------~-lGF---l~-~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 61 EVCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG-----------R-LGF---LT-DIRPDELEFKLAEVLDG 118 (295)
T ss_pred cCCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC-----------c-ccc---cc-cCCHHHHHHHHHHHHcC
Confidence 34677 9999999999999753 5677776541 2 231 11 46789999999999875
No 265
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=35.28 E-value=1.5e+02 Score=25.01 Aligned_cols=29 Identities=10% Similarity=0.164 Sum_probs=21.6
Q ss_pred ccccCceeeccCch------hHHHHHhhCCCcccCCc
Q 013342 336 HVAVGGFWSHCGWN------STLECLCEGVPMICRPC 366 (445)
Q Consensus 336 ~~~~~~~I~HgG~g------sv~eal~~GvP~v~~P~ 366 (445)
++.+ +++|.|.| ++.+|...++|+|++.-
T Consensus 64 ~~~v--~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 64 RPGV--VIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp SEEE--EEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred cceE--EEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 3555 88888744 67788999999999874
No 266
>PRK11914 diacylglycerol kinase; Reviewed
Probab=35.25 E-value=1e+02 Score=28.88 Aligned_cols=29 Identities=14% Similarity=0.093 Sum_probs=23.5
Q ss_pred ccccCceeeccCchhHHHHH----hhCCCcccCCc
Q 013342 336 HVAVGGFWSHCGWNSTLECL----CEGVPMICRPC 366 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal----~~GvP~v~~P~ 366 (445)
..++ +|.-||-||+.|++ ..++|+-++|.
T Consensus 64 ~~d~--vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 64 GTDA--LVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred CCCE--EEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 3455 89999999999986 34789999996
No 267
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional
Probab=35.08 E-value=4.1e+02 Score=27.72 Aligned_cols=52 Identities=13% Similarity=0.162 Sum_probs=29.7
Q ss_pred eccCchhHHHHHhhCCC--c--ccCCc-ccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHh
Q 013342 344 SHCGWNSTLECLCEGVP--M--ICRPC-FGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLM 404 (445)
Q Consensus 344 ~HgG~gsv~eal~~GvP--~--v~~P~-~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll 404 (445)
.+||+|+........-+ + +.+|- +.+ ......+.+.. .+|++.|.++|++++
T Consensus 524 ~~GG~gs~v~~~l~~~~~~~~~~gi~d~f~~-~g~~~~l~~~~--------Gl~~~~I~~~i~~~l 580 (581)
T PRK12315 524 LDGGFGEKIARYYGNSDMKVLNYGAKKEFND-RVPVEELYKRN--------HLTPEQIVEDILSVL 580 (581)
T ss_pred cCCCHHHHHHHHHHcCCCeEEEecCCCCCCC-CCCHHHHHHHH--------CcCHHHHHHHHHHHh
Confidence 46999887666554433 2 34443 333 23332332211 478899999888765
No 268
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=35.05 E-value=2.6e+02 Score=23.14 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=24.7
Q ss_pred cCCCccChHHHHHHHHHHHhCCCeEEEE
Q 013342 5 PSPFQGHMTPMLQLGTILYSNGFSITVV 32 (445)
Q Consensus 5 ~~p~~GH~~p~l~La~~L~~~Gh~Vt~~ 32 (445)
+-++-|-..-.+.|++.|.++|.+|.++
T Consensus 5 t~~~~GKT~va~~L~~~l~~~g~~V~~~ 32 (166)
T TIGR00347 5 TDTGVGKTVASSALAAKLKKAGYSVGYY 32 (166)
T ss_pred CCCCccHHHHHHHHHHHHHHCCCcEEEE
Confidence 3467888899999999999999999986
No 269
>PF01372 Melittin: Melittin; InterPro: IPR002116 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an Arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 3. Melittin is the principal protein component of the venom of the honeybee, Apis mellifera. It inhibits protein kinase C, Ca2+/calmodulin-dependent protein kinase II, myosin light chain kinase and Na+/K+-ATPase (synaptosomal membrane) and is a cell membrane lytic factor. Melittin is a small peptide with no disulphide bridge; the N-terminal part of the molecule is predominantly hydrophobic and the C-terminal part is hydrophilic and strongly basic. The molecular mechanisms underlying the various effects of melittin on membranes have not been completely defined and much of the evidence indicates that different molecular mechanisms may underlie different actions of the peptide []. Extensive work with melittin has shown that the venom has multiple effects, probably, as a result of its interaction with negatively changed phospholipids. It inhibits well known transport pumps such as the Na+-K+-ATPase and the H+-K+-ATPase. Melittin increases the permeability of cell membranes to ions, particularly Na+ and indirectly Ca2+, because of the Na+-Ca2+-exchange. This effect results in marked morphological and functional changes, particularly in excitable tissues such as cardiac myocytes. In some other tissues, e.g., cornea, not only Na+ but Cl- permeability is also increased by melittin. Similar effects to melittin on H+-K+-ATPase have been found with the synthetic amphipathic polypeptide Trp-3 []. The study of melittin in model membranes has been useful for the development of methodology for determination of membrane protein structures. A molecular dynamics simulation of melittin in a hydrated dipalmitoylphosphatidylcholine (DPPC) bilayer was carried out. The effect of melittin on the surrounding membrane was localised to its immediate vicinity, and its asymmetry with respect to the two layers may be a result of the fact that it is not fully transmembranal. Melittin's hydrophilic C terminus anchors it at the extracellular interface, leaving the N terminus "loose" in the lower layer of the membrane [].; GO: 0004860 protein kinase inhibitor activity, 0005576 extracellular region; PDB: 3QRX_B 2MLT_A 1BH1_A.
Probab=34.16 E-value=7.5 Score=20.91 Aligned_cols=17 Identities=29% Similarity=0.636 Sum_probs=13.3
Q ss_pred CchhHHHHHhhCCCccc
Q 013342 347 GWNSTLECLCEGVPMIC 363 (445)
Q Consensus 347 G~gsv~eal~~GvP~v~ 363 (445)
|.|+++-.|..|.|.++
T Consensus 1 gIGa~Lkvla~~LP~lI 17 (26)
T PF01372_consen 1 GIGAILKVLATGLPTLI 17 (26)
T ss_dssp -HHHHHHHHHTHHHHHH
T ss_pred ChhHHHHHHHhcChHHH
Confidence 67888899999888764
No 270
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=34.13 E-value=3e+02 Score=23.61 Aligned_cols=133 Identities=9% Similarity=0.104 Sum_probs=68.8
Q ss_pred eEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCC-cEEEEecc-------HHHH
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQEN-GCIVKWAP-------QKEV 333 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n-~~~~~~~p-------q~~l 333 (445)
+++.-.||+... ....+++.|++.+.++-++.+... ...+.....+...++ ++...|.+ |-++
T Consensus 4 Ill~vtGsiaa~---~~~~li~~L~~~g~~V~vv~T~~A------~~fi~~~~l~~l~~~~v~~~~~~~~~~~~~~hi~l 74 (182)
T PRK07313 4 ILLAVSGSIAAY---KAADLTSQLTKRGYQVTVLMTKAA------TKFITPLTLQVLSKNPVHLDVMDEHDPKLMNHIEL 74 (182)
T ss_pred EEEEEeChHHHH---HHHHHHHHHHHCCCEEEEEEChhH------HHHcCHHHHHHHhCCceEeccccccccCCcccccc
Confidence 555555555431 234566677777776655543221 011222112233333 33333332 2223
Q ss_pred hhccccCceeeccCchhHHHH-------------Hhh--CCCcccCCc----ccch---hhhHHHHHhhheeeeEeCc--
Q 013342 334 LSHVAVGGFWSHCGWNSTLEC-------------LCE--GVPMICRPC----FGDQ---RVNARYVSHVWRTGLELEN-- 389 (445)
Q Consensus 334 L~~~~~~~~I~HgG~gsv~ea-------------l~~--GvP~v~~P~----~~DQ---~~na~~v~~~~G~g~~~~~-- 389 (445)
...+|+ .+|.=|-+||+... +.. ++|+|++|- .+.. ..|-.++++ +|+=+.-..
T Consensus 75 ~~~aD~-~vIaPaTantlakiA~GiaDnllt~~~~a~~~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~-~G~~vi~p~~g 152 (182)
T PRK07313 75 AKRADL-FLVAPATANTIAKLAHGIADDLVTSVALALPATTPKLIAPAMNTKMYENPATQRNLKTLKE-DGVQEIEPKEG 152 (182)
T ss_pred ccccCE-EEEeeCCHhHHHHHHccccCcHHHHHHHHcCCCCCEEEEECCCHHHhcCHHHHHHHHHHHH-CCCEEECCCCC
Confidence 333443 46666766654332 334 899999996 3343 456677777 576554421
Q ss_pred -----------ccCHHHHHHHHHHHhc
Q 013342 390 -----------ELEREVVEKAVRRLMV 405 (445)
Q Consensus 390 -----------~~t~~~l~~ai~~ll~ 405 (445)
-.+.++|.+.|.+.+.
T Consensus 153 ~la~~~~g~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 153 LLACGDEGYGALADIETILETIENTLK 179 (182)
T ss_pred ccccCCccCCCCCCHHHHHHHHHHHhc
Confidence 3567788777776654
No 271
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=33.68 E-value=2e+02 Score=27.44 Aligned_cols=105 Identities=10% Similarity=0.062 Sum_probs=57.7
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHH-hCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhc
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLV-NSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSH 336 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~ 336 (445)
.++.+-.+.+|.+. +.+++-++ .++.+++..- .. .++.... .. -+.+.+.+++|+.
T Consensus 144 ~gktvGIiG~G~IG-------~~va~~l~~~fgm~V~~~~-~~----------~~~~~~~--~~---~~~~~~l~ell~~ 200 (323)
T PRK15409 144 HHKTLGIVGMGRIG-------MALAQRAHFGFNMPILYNA-RR----------HHKEAEE--RF---NARYCDLDTLLQE 200 (323)
T ss_pred CCCEEEEEcccHHH-------HHHHHHHHhcCCCEEEEEC-CC----------CchhhHH--hc---CcEecCHHHHHHh
Confidence 45668899999887 44555554 5677766432 11 0111000 01 1246688899999
Q ss_pred cccCceeeccCchhHH---------HHHhhCCCcccCC--cccchhhhHHHHHhh-h-eeeeEe
Q 013342 337 VAVGGFWSHCGWNSTL---------ECLCEGVPMICRP--CFGDQRVNARYVSHV-W-RTGLEL 387 (445)
Q Consensus 337 ~~~~~~I~HgG~gsv~---------eal~~GvP~v~~P--~~~DQ~~na~~v~~~-~-G~g~~~ 387 (445)
+|+ ++.|+-.+.-. +.+.-|.=+|-+- -..|+......++.. + |+|+.+
T Consensus 201 sDv--v~lh~plt~~T~~li~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDV 262 (323)
T PRK15409 201 SDF--VCIILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDV 262 (323)
T ss_pred CCE--EEEeCCCChHHhhccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeec
Confidence 999 99999876532 2233232222221 124666666666552 1 455554
No 272
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=33.62 E-value=89 Score=29.54 Aligned_cols=48 Identities=21% Similarity=0.180 Sum_probs=37.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCce
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN--GFSITVVHTHFNPPNPSNHPEFN 48 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~ 48 (445)
||++-..+.|++.=..++.+.|.++ +.+||+++.+.........+.++
T Consensus 3 ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~~~~p~vd 52 (322)
T PRK10964 3 VLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIPSWHPAVD 52 (322)
T ss_pred EEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHHhcCCCcc
Confidence 5788889999999999999999997 99999999865444433344443
No 273
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=33.51 E-value=51 Score=22.98 Aligned_cols=20 Identities=25% Similarity=0.330 Sum_probs=16.9
Q ss_pred HHHHHHHHHhCCCeEEEEeC
Q 013342 15 MLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~ 34 (445)
-+..|..|.++|++|+++=.
T Consensus 8 Gl~aA~~L~~~g~~v~v~E~ 27 (68)
T PF13450_consen 8 GLAAAYYLAKAGYRVTVFEK 27 (68)
T ss_dssp HHHHHHHHHHTTSEEEEEES
T ss_pred HHHHHHHHHHCCCcEEEEec
Confidence 36788999999999999865
No 274
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=33.45 E-value=62 Score=25.16 Aligned_cols=39 Identities=13% Similarity=-0.028 Sum_probs=26.9
Q ss_pred HHhhccccCceeecc---CchhHHHH---HhhCCCcccCCcccch
Q 013342 332 EVLSHVAVGGFWSHC---GWNSTLEC---LCEGVPMICRPCFGDQ 370 (445)
Q Consensus 332 ~lL~~~~~~~~I~Hg---G~gsv~ea---l~~GvP~v~~P~~~DQ 370 (445)
..+..|++..++-.+ +.||..|. ...|+|++++-....+
T Consensus 57 ~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d~~~ 101 (113)
T PF05014_consen 57 EGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTEDDRP 101 (113)
T ss_dssp HHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECCCCT
T ss_pred HHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcCCcc
Confidence 456777774455554 89999996 6679999988654443
No 275
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]
Probab=33.24 E-value=3.8e+02 Score=27.81 Aligned_cols=113 Identities=20% Similarity=0.252 Sum_probs=62.1
Q ss_pred CCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhc
Q 013342 257 QAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSH 336 (445)
Q Consensus 257 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~ 336 (445)
+..+.++++++|++.. .....++.|.+.|..+-++= . -...++.+++... +..+
T Consensus 499 ~~G~~vail~~G~~~~----~al~vae~L~~~Gi~~TVvd-~------rfvkPlD~~ll~~---------------La~~ 552 (627)
T COG1154 499 KEGEKVAILAFGTMLP----EALKVAEKLNAYGISVTVVD-P------RFVKPLDEALLLE---------------LAKS 552 (627)
T ss_pred ecCCcEEEEecchhhH----HHHHHHHHHHhcCCCcEEEc-C------eecCCCCHHHHHH---------------HHhh
Confidence 3556699999999975 23334555555555432221 0 0123344443211 2222
Q ss_pred cccCceee------ccCchh-HHHHHh-hC--CCcccCCc---ccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHH
Q 013342 337 VAVGGFWS------HCGWNS-TLECLC-EG--VPMICRPC---FGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRL 403 (445)
Q Consensus 337 ~~~~~~I~------HgG~gs-v~eal~-~G--vP~v~~P~---~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~l 403 (445)
-++ +|| +||.|| ++|.+. +| +|++.+.+ +.||-.-....++. .++++.|.+.|.+.
T Consensus 553 h~~--~vtlEe~~~~GG~Gs~v~efl~~~~~~~~v~~lglpd~fi~hg~~~el~~~~---------gLd~~~i~~~i~~~ 621 (627)
T COG1154 553 HDL--VVTLEENVVDGGFGSAVLEFLAAHGILVPVLNLGLPDEFIDHGSPEELLAEL---------GLDAEGIARRILEW 621 (627)
T ss_pred cCe--EEEEecCcccccHHHHHHHHHHhcCCCCceEEecCChHhhccCCHHHHHHHc---------CCCHHHHHHHHHHH
Confidence 222 332 899987 455544 34 45544433 45666666666663 47889999988877
Q ss_pred hcC
Q 013342 404 MVG 406 (445)
Q Consensus 404 l~~ 406 (445)
+..
T Consensus 622 l~~ 624 (627)
T COG1154 622 LKA 624 (627)
T ss_pred Hhh
Confidence 753
No 276
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=33.23 E-value=1.5e+02 Score=30.60 Aligned_cols=27 Identities=19% Similarity=0.287 Sum_probs=22.2
Q ss_pred cCceeeccCch------hHHHHHhhCCCcccCC
Q 013342 339 VGGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 339 ~~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
.+++++|.|-| .+++|...++|+|++.
T Consensus 65 ~gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 65 VGVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 33489998855 7889999999999994
No 277
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=32.76 E-value=3e+02 Score=25.20 Aligned_cols=31 Identities=10% Similarity=0.109 Sum_probs=25.3
Q ss_pred HHHhhccccCceeeccCchhHHHHHhhCCCcccC
Q 013342 331 KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICR 364 (445)
Q Consensus 331 ~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~ 364 (445)
..++.++++ +|+.- .|.++-|...|+|+|++
T Consensus 193 ~~li~~~~l--~I~~D-sg~~HlA~a~~~p~i~l 223 (279)
T cd03789 193 AALLARADL--VVTND-SGPMHLAAALGTPTVAL 223 (279)
T ss_pred HHHHHhCCE--EEeeC-CHHHHHHHHcCCCEEEE
Confidence 458889998 99864 47788888999999887
No 278
>PRK00784 cobyric acid synthase; Provisional
Probab=32.55 E-value=4.2e+02 Score=26.90 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=23.8
Q ss_pred CCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 7 PFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 7 p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
...|-..-...|++.|+++|++|..+=+
T Consensus 12 T~vGKT~vt~~L~~~l~~~G~~v~~~Kp 39 (488)
T PRK00784 12 SDAGKSTLVAGLCRILARRGYRVAPFKA 39 (488)
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEecccc
Confidence 4578888999999999999999987644
No 279
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=32.33 E-value=1.2e+02 Score=31.53 Aligned_cols=25 Identities=12% Similarity=0.137 Sum_probs=20.9
Q ss_pred ceeeccCch------hHHHHHhhCCCcccCC
Q 013342 341 GFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 341 ~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
++++|.|-| .+.+|...++|||++.
T Consensus 71 v~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 71 VCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred EEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 378888855 6789999999999995
No 280
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=32.16 E-value=2e+02 Score=26.76 Aligned_cols=29 Identities=17% Similarity=0.184 Sum_probs=20.6
Q ss_pred ccccCceeeccCchhHHHHHhh-----CCCccc-CCc
Q 013342 336 HVAVGGFWSHCGWNSTLECLCE-----GVPMIC-RPC 366 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~-----GvP~v~-~P~ 366 (445)
.+++ +|.-||-||+.|++.. ..|.+. +|.
T Consensus 57 ~~d~--ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 57 GVDT--VIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred CCCE--EEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 3455 9999999999996543 345454 886
No 281
>PRK06270 homoserine dehydrogenase; Provisional
Probab=32.08 E-value=3e+02 Score=26.43 Aligned_cols=58 Identities=12% Similarity=0.074 Sum_probs=35.7
Q ss_pred cHHHHhhccccCceee------ccC---chhHHHHHhhCCCccc---CCcccchhhhHHHHHhhheeeeEe
Q 013342 329 PQKEVLSHVAVGGFWS------HCG---WNSTLECLCEGVPMIC---RPCFGDQRVNARYVSHVWRTGLEL 387 (445)
Q Consensus 329 pq~~lL~~~~~~~~I~------HgG---~gsv~eal~~GvP~v~---~P~~~DQ~~na~~v~~~~G~g~~~ 387 (445)
...++|..+++..+|- |+| .--+.++|.+|+++|+ -|+...-....+..++. |+.+..
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~~-g~~~~~ 149 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKKN-GVRFRY 149 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHHc-CCEEEE
Confidence 5566775444333655 332 3456899999999999 47654334455555563 776665
No 282
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=31.97 E-value=73 Score=27.17 Aligned_cols=29 Identities=14% Similarity=0.067 Sum_probs=20.7
Q ss_pred CceEEEEcCCCCc--hHHHHHHhCCceEEEc
Q 013342 101 QIACIIYDEIFYF--PEAAANQLNLQSIILR 129 (445)
Q Consensus 101 ~~D~vv~D~~~~~--~~~~A~~~giP~v~~~ 129 (445)
+||+||....... ...--+..|||++.+.
T Consensus 69 ~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 69 KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 9999998654432 3344567999998864
No 283
>PF07565 Band_3_cyto: Band 3 cytoplasmic domain; InterPro: IPR013769 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains.; GO: 0008509 anion transmembrane transporter activity, 0006820 anion transport, 0016021 integral to membrane; PDB: 1HYN_Q.
Probab=31.84 E-value=89 Score=28.63 Aligned_cols=44 Identities=23% Similarity=0.320 Sum_probs=33.8
Q ss_pred ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 390 ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 390 ~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
..+.-+|.+++..+|+| +.|++-|.+.+.+-.-. .++++|+++.
T Consensus 203 ~~~y~eiGR~~atlmsd---~~F~~~ay~a~~r~dl~--------~~id~Fl~~~ 246 (257)
T PF07565_consen 203 DKDYHEIGRAIATLMSD---EVFHDVAYKAKSREDLL--------AGIDEFLDDS 246 (257)
T ss_dssp TB-HHHHHHHHHHHHTS---HHHHHHHHH-SSHHHHH--------HHHHHHHHT-
T ss_pred CCcccccchhhhhhhcc---HHHHHHHHHcCCHHHHH--------HHHHHHhcCc
Confidence 68889999999999999 89999888877665443 7788887753
No 284
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=31.79 E-value=92 Score=29.77 Aligned_cols=27 Identities=15% Similarity=0.229 Sum_probs=20.6
Q ss_pred CceEEEEcCCCCch----------HHHHHHhCCceEE
Q 013342 101 QIACIIYDEIFYFP----------EAAANQLNLQSII 127 (445)
Q Consensus 101 ~~D~vv~D~~~~~~----------~~~A~~~giP~v~ 127 (445)
+||++|+-+.+-.+ ..+.++++||.+.
T Consensus 80 ~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vt 116 (349)
T PF07355_consen 80 KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVT 116 (349)
T ss_pred CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEE
Confidence 99999999877321 1356789999997
No 285
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=31.74 E-value=71 Score=25.03 Aligned_cols=34 Identities=15% Similarity=0.048 Sum_probs=29.5
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
++..+.++-.|-....-++..|.++|++|.++..
T Consensus 2 ~l~~~~~~~~h~lg~~~~~~~l~~~G~~v~~l~~ 35 (125)
T cd02065 2 VLGATVGGDVHDIGKNIVAIALRDNGFEVIDLGV 35 (125)
T ss_pred EEEEEcCCchhhHHHHHHHHHHHHCCCEEEEcCC
Confidence 3567788899999999999999999999998854
No 286
>PRK08322 acetolactate synthase; Reviewed
Probab=31.72 E-value=1.5e+02 Score=30.57 Aligned_cols=27 Identities=22% Similarity=0.234 Sum_probs=22.0
Q ss_pred cCceeeccCch------hHHHHHhhCCCcccCC
Q 013342 339 VGGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 339 ~~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
.+++++|.|-| .+.+|...++|+|++.
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 33488898855 7889999999999985
No 287
>COG3245 CycB Cytochrome c5 [Energy production and conversion]
Probab=31.71 E-value=46 Score=26.08 Aligned_cols=46 Identities=17% Similarity=0.228 Sum_probs=35.2
Q ss_pred HhhCCCcccCCcccchhhhHHHHHhhheeeeEe-----------Cc----ccCHHHHHHHHHH
Q 013342 355 LCEGVPMICRPCFGDQRVNARYVSHVWRTGLEL-----------EN----ELEREVVEKAVRR 402 (445)
Q Consensus 355 l~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~-----------~~----~~t~~~l~~ai~~ 402 (445)
+.|+.++...|..+|.-.|+-|+.+ |.-..+ .+ +.|.|++..+|+-
T Consensus 60 ~CHa~~~~GAPk~GdkAaW~PRiaq--G~dtL~~hai~GfnAMPpkG~ca~cSdDe~kAaId~ 120 (126)
T COG3245 60 ACHAAGLPGAPKTGDKAAWAPRIAQ--GKDTLLDHAINGFNAMPPKGGCADCSDDEVKAAIDF 120 (126)
T ss_pred HhccCCCCCCCCCCchhhhhhHHHh--chHHHHHHHhccccCCCCCCCcCCCCHHHHHHHHHH
Confidence 4566678899999999999999987 443333 22 5899999999953
No 288
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=31.69 E-value=2.4e+02 Score=29.10 Aligned_cols=64 Identities=19% Similarity=0.099 Sum_probs=38.8
Q ss_pred CceeeccCch------hHHHHHhhCCCcccCCc-------------ccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHH
Q 013342 340 GGFWSHCGWN------STLECLCEGVPMICRPC-------------FGDQRVNARYVSHVWRTGLELEN-ELEREVVEKA 399 (445)
Q Consensus 340 ~~~I~HgG~g------sv~eal~~GvP~v~~P~-------------~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~a 399 (445)
+++++|.|-| .+.+|...++|+|++-- ..||....+-+.+ ....+.. +--++.+.+|
T Consensus 73 gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~g~~~~~~~~~~~~q~~d~~~l~~~~tk---~~~~v~~~~~~~~~~~~A 149 (557)
T PRK08199 73 GICFVTRGPGATNASIGVHTAFQDSTPMILFVGQVARDFREREAFQEIDYRRMFGPMAK---WVAEIDDAARIPELVSRA 149 (557)
T ss_pred EEEEeCCCccHHHHHHHHHHHhhcCCCEEEEecCCccccCCCCcccccCHHHhhhhhhc---eeeecCCHHHHHHHHHHH
Confidence 3389999865 67899999999998842 1255554444443 1233322 2224566666
Q ss_pred HHHHhcC
Q 013342 400 VRRLMVG 406 (445)
Q Consensus 400 i~~ll~~ 406 (445)
++..++.
T Consensus 150 ~~~A~~~ 156 (557)
T PRK08199 150 FHVATSG 156 (557)
T ss_pred HHHHhcC
Confidence 6666554
No 289
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=31.51 E-value=1.9e+02 Score=27.70 Aligned_cols=98 Identities=11% Similarity=0.150 Sum_probs=59.3
Q ss_pred CCceEEEEeccccc---CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhc-CCc-EEEEe--ccH-
Q 013342 259 PESVIYVSLGSVAS---MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ-ENG-CIVKW--APQ- 330 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~-~~~~~--~pq- 330 (445)
+++.|.+..|+... .+.+.+.++++.|.+.+.++++..+++.. + ...-..+.+... .++ -+.+- +.+
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~---e--~~~~~~i~~~~~~~~~~~l~g~~sL~el 256 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKD---D--LACVNEIAQGCQTPPVTALAGKTTFPEL 256 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChH---H--HHHHHHHHHhcCCCccccccCCCCHHHH
Confidence 35677778777533 56677888888887777777666432200 0 000112221111 122 22333 333
Q ss_pred HHHhhccccCceeeccCchhHHHHHhhCCCcccC
Q 013342 331 KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICR 364 (445)
Q Consensus 331 ~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~ 364 (445)
.+++.++++ +|+ .-.|-++=|.+.|+|+|++
T Consensus 257 ~ali~~a~l--~v~-nDSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 257 GALIDHAQL--FIG-VDSAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHHHhCCE--EEe-cCCHHHHHHHHcCCCEEEE
Confidence 448999998 997 5678899999999999876
No 290
>PF06825 HSBP1: Heat shock factor binding protein 1; InterPro: IPR009643 Heat shock factor binding protein 1 (HSBP1) appears to be a negative regulator of the heat shock response [].; PDB: 3CI9_A.
Probab=31.16 E-value=41 Score=22.47 Aligned_cols=46 Identities=17% Similarity=0.223 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 394 EVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 394 ~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
.+|...|..+|.. +..+-..|++.+-..+++=|+.-+.+|+=|.++
T Consensus 2 ~elt~~v~~lL~q-----mq~kFq~mS~~I~~riDeM~~RIDdLE~si~dl 47 (54)
T PF06825_consen 2 QELTAFVQNLLQQ-----MQDKFQTMSDQILGRIDEMSSRIDDLEKSIADL 47 (54)
T ss_dssp HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHCCHHHH---
T ss_pred hHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 5788899999965 888889999888888777777666666655543
No 291
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=30.71 E-value=71 Score=29.55 Aligned_cols=53 Identities=23% Similarity=0.302 Sum_probs=37.0
Q ss_pred ccccCceeeccCchhHHHHHhh-CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 336 HVAVGGFWSHCGWNSTLECLCE-GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~-GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+++ +|+=||-||++.+.+. ..|++.+-. -+ + |-.- +.+++++.+++.+++++
T Consensus 52 ~~D~--vi~lGGDGT~L~a~~~~~~PilGIN~-----------G~-l--GFL~--~~~~~~~~~~l~~i~~g 105 (271)
T PRK01185 52 NADV--IITIGGDGTILRTLQRAKGPILGINM-----------GG-L--GFLT--EIEIDEVGSAIKKLIRG 105 (271)
T ss_pred CCCE--EEEEcCcHHHHHHHHHcCCCEEEEEC-----------CC-C--ccCc--ccCHHHHHHHHHHHHcC
Confidence 5677 9999999999999874 446654422 11 1 2111 46778999999999986
No 292
>PF12363 DUF3647: Phage protein ; InterPro: IPR024410 Proteins in this entry are frequently annotated as phage proteins, however there is little accompanying literature to back this up or to describe the nature of these phage proteins.
Probab=30.63 E-value=1.4e+02 Score=23.38 Aligned_cols=78 Identities=17% Similarity=0.256 Sum_probs=47.9
Q ss_pred eccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 013342 344 SHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEE 422 (445)
Q Consensus 344 ~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~ 422 (445)
.-.|.+.+.-.|..|=|... +.. +-++..-.+ ..|.++|.++|.++.+++ ..+.+-...+-+.
T Consensus 34 ~g~G~~~l~~~l~~~d~~al----------~d~----i~~a~~~~~~~~s~~eIe~~ie~~~e~~--~~~~~l~~~vl~e 97 (113)
T PF12363_consen 34 FGMGLSQLVPGLLQGDPVAL----------ADI----IYAATAHEKKRPSREEIEDYIEDIIEDE--DDIEELFDEVLKE 97 (113)
T ss_pred cccCHHHHHHHHHcCCHHHH----------HHH----HHHHhcccCCCCCHHHHHHHHHHHHhcc--hhHHHHHHHHHHH
Confidence 34566666666655544422 222 334433333 679999999999988873 3366666666666
Q ss_pred HHHHHhcCCChHHHHHHHH
Q 013342 423 IELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 423 ~~~~~~~~g~~~~~~~~~~ 441 (445)
+.++ +--++++.+++
T Consensus 98 l~~s----~~~k~~~k~~~ 112 (113)
T PF12363_consen 98 LKKS----NFFKRAVKKFL 112 (113)
T ss_pred HHhC----hhHHHHHHHHh
Confidence 6665 66666666554
No 293
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=30.44 E-value=2.8e+02 Score=26.71 Aligned_cols=103 Identities=15% Similarity=0.203 Sum_probs=67.9
Q ss_pred CCcEEEEeccHHHHhh-ccccCceeecc---Cch-hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 320 ENGCIVKWAPQKEVLS-HVAVGGFWSHC---GWN-STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 320 ~n~~~~~~~pq~~lL~-~~~~~~~I~Hg---G~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
+...+++-.+--+.|+ |.|+ ||||= |.| .-.|+|+-|-|+| .|+..+.+ +|...+. ++..
T Consensus 253 gkasfegR~~~p~fla~~tD~--VvSHqWeN~lNYlY~daLyggYPLV---------HNS~~l~d---~GYYY~~-fD~~ 317 (364)
T PF10933_consen 253 GKASFEGRFDFPDFLAQHTDA--VVSHQWENPLNYLYYDALYGGYPLV---------HNSPLLKD---VGYYYPD-FDAF 317 (364)
T ss_pred CeeEEeeecChHHHHHhCCCE--EEeccccchhhHHHHHHHhcCCCcc---------cCcchhcc---cCcCCCC-ccHH
Confidence 4455667777766554 8888 99994 444 4579999999997 46777665 5666654 5555
Q ss_pred HHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 395 VVEKAVRRLMV--GEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 395 ~l~~ai~~ll~--~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
+=++++.+++. |++.+.|+++|+++=..+.- .....++.+.+.
T Consensus 318 ~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p------~n~~nv~~y~~~ 362 (364)
T PF10933_consen 318 EGARQLLRAIREHDADLDAYRARARRLLDRLSP------ENPANVRAYEAR 362 (364)
T ss_pred HHHHHHHHHHHHccccHHHHHHHHHHHHHhhCC------CCHHHHHHHHHh
Confidence 55555555554 33368899999988777664 344555555443
No 294
>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=30.38 E-value=3.1e+02 Score=22.52 Aligned_cols=35 Identities=23% Similarity=0.149 Sum_probs=30.1
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
.++..++.|--.....++..|.++|++|.++..+.
T Consensus 3 ~~~G~~GsGKTt~~~~l~~~~~~~g~~v~ii~~D~ 37 (148)
T cd03114 3 GITGVPGAGKSTLIDALITALRARGKRVAVLAIDP 37 (148)
T ss_pred EEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEeCC
Confidence 45667789999999999999999999999988653
No 295
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=30.18 E-value=3.4e+02 Score=25.30 Aligned_cols=76 Identities=11% Similarity=0.015 Sum_probs=45.4
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccc
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVA 338 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~ 338 (445)
++.+..+.+|.+. +.++..++..+.++.+.-+ . ++............+.+.+..+++..+|
T Consensus 151 gk~v~IiG~G~iG-------~avA~~L~~~G~~V~v~~R-~-----------~~~~~~~~~~g~~~~~~~~l~~~l~~aD 211 (287)
T TIGR02853 151 GSNVMVLGFGRTG-------MTIARTFSALGARVFVGAR-S-----------SADLARITEMGLIPFPLNKLEEKVAEID 211 (287)
T ss_pred CCEEEEEcChHHH-------HHHHHHHHHCCCEEEEEeC-C-----------HHHHHHHHHCCCeeecHHHHHHHhccCC
Confidence 3558889999776 5677777788876544432 1 1111111111222334444567888999
Q ss_pred cCceeeccCchhHHHHH
Q 013342 339 VGGFWSHCGWNSTLECL 355 (445)
Q Consensus 339 ~~~~I~HgG~gsv~eal 355 (445)
+ +|+|...+.+.+..
T Consensus 212 i--Vint~P~~ii~~~~ 226 (287)
T TIGR02853 212 I--VINTIPALVLTADV 226 (287)
T ss_pred E--EEECCChHHhCHHH
Confidence 9 99999877555443
No 296
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=30.18 E-value=3.6e+02 Score=23.53 Aligned_cols=126 Identities=12% Similarity=0.025 Sum_probs=78.5
Q ss_pred ceEEEEecccccCChh-hHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcccc
Q 013342 261 SVIYVSLGSVASMDKK-EPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAV 339 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~-~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~ 339 (445)
|..++.-.... +.+ .-+.+.+.+.+.+.++|+-.+ +..-+.+.|.++.+++++-. ||++
T Consensus 52 pt~~~~~k~~~--~r~~~d~~l~~~l~~~~~dlvvLAG--------yMrIL~~~fl~~~~grIlNI----------HPSL 111 (200)
T COG0299 52 PTVVLDRKEFP--SREAFDRALVEALDEYGPDLVVLAG--------YMRILGPEFLSRFEGRILNI----------HPSL 111 (200)
T ss_pred CEEEeccccCC--CHHHHHHHHHHHHHhcCCCEEEEcc--------hHHHcCHHHHHHhhcceEec----------Cccc
Confidence 34445444332 333 344589999998888776642 13446677766666654433 5777
Q ss_pred CceeeccCchhHHHHHhhCCCcccCCccc-chhhhHHHHHhhheeeeEe-------CcccCHHHHHHHHHHHhcCCcHHH
Q 013342 340 GGFWSHCGWNSTLECLCEGVPMICRPCFG-DQRVNARYVSHVWRTGLEL-------ENELEREVVEKAVRRLMVGEEGEE 411 (445)
Q Consensus 340 ~~~I~HgG~gsv~eal~~GvP~v~~P~~~-DQ~~na~~v~~~~G~g~~~-------~~~~t~~~l~~ai~~ll~~~~~~~ 411 (445)
.=.++|..+..+++.+|+..-.+-+++ | +. +..|..+ ...-|.|.|++.|.+ .+- .-
T Consensus 112 --LP~f~G~h~~~~A~~aG~k~sG~TVH~V~--------e~-vD~GpII~Q~~Vpv~~~Dt~etl~~RV~~-~Eh---~l 176 (200)
T COG0299 112 --LPAFPGLHAHEQALEAGVKVSGCTVHFVT--------EG-VDTGPIIAQAAVPVLPGDTAETLEARVLE-QEH---RL 176 (200)
T ss_pred --ccCCCCchHHHHHHHcCCCccCcEEEEEc--------cC-CCCCCeEEEEeeeecCCCCHHHHHHHHHH-HHH---HH
Confidence 777999999999999999987776542 2 22 3444333 123478888888865 333 45
Q ss_pred HHHHHHHHHH
Q 013342 412 MRQRAKNLKE 421 (445)
Q Consensus 412 ~~~~a~~l~~ 421 (445)
|-+..+.+.+
T Consensus 177 yp~~v~~~~~ 186 (200)
T COG0299 177 YPLAVKLLAE 186 (200)
T ss_pred HHHHHHHHHh
Confidence 6666655554
No 297
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=29.78 E-value=3.4e+02 Score=22.91 Aligned_cols=85 Identities=16% Similarity=0.245 Sum_probs=48.5
Q ss_pred CcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhh
Q 013342 198 SSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKE 277 (445)
Q Consensus 198 ~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~ 277 (445)
...+++-+.++.-......++..+ |+...+|-.+.... ...++++.+.++...+ .+|++++|+ |.+
T Consensus 49 ~~ifllG~~~~~~~~~~~~l~~~y-P~l~ivg~~~g~f~-------~~~~~~i~~~I~~~~p-div~vglG~-----PkQ 114 (172)
T PF03808_consen 49 KRIFLLGGSEEVLEKAAANLRRRY-PGLRIVGYHHGYFD-------EEEEEAIINRINASGP-DIVFVGLGA-----PKQ 114 (172)
T ss_pred CeEEEEeCCHHHHHHHHHHHHHHC-CCeEEEEecCCCCC-------hhhHHHHHHHHHHcCC-CEEEEECCC-----CHH
Confidence 355566665554445555667767 67777775553321 1233456677764333 499999984 434
Q ss_pred HHHHHHHHHhCCCCEEEEE
Q 013342 278 PEEMAWGLVNSKQPFLWVI 296 (445)
Q Consensus 278 ~~~~~~al~~~~~~~v~~~ 296 (445)
-..+.+-..+++..+++.+
T Consensus 115 E~~~~~~~~~l~~~v~i~v 133 (172)
T PF03808_consen 115 ERWIARHRQRLPAGVIIGV 133 (172)
T ss_pred HHHHHHHHHHCCCCEEEEE
Confidence 4445555556676744443
No 298
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.69 E-value=1.9e+02 Score=28.22 Aligned_cols=50 Identities=14% Similarity=0.196 Sum_probs=36.3
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-------CCCCCCceEEE
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN-------PSNHPEFNFQS 51 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-------~~~~~~~~~~~ 51 (445)
+|+-.=+.|-..-...||..+.++|+.+.+++.+-.... .+...++.|+.
T Consensus 105 mfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaDTFRagAfDQLkqnA~k~~iP~yg 161 (483)
T KOG0780|consen 105 MFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCADTFRAGAFDQLKQNATKARVPFYG 161 (483)
T ss_pred EEEeccCCCcceeHHHHHHHHHhcCCceeEEeecccccchHHHHHHHhHhhCCeeEe
Confidence 455555778888899999999999999999998643332 12334666665
No 299
>PF08766 DEK_C: DEK C terminal domain; InterPro: IPR014876 DEK is a chromatin associated protein that is linked with cancers and autoimmune disease. This domain is found at the C-terminal of DEK and is of clinical importance since it can reverse the characteristic abnormal DNA-mutagen sensitivity in fibroblasts from ataxia-telangiectasia (A-T) patients []. The structure of this domain shows it to be homologous to the E2F/DP transcription factor family []. This domain is also found in chitin synthase proteins like Q8TF96 from SWISSPROT, and in protein phosphatases such as Q6NN85 from SWISSPROT. ; PDB: 1Q1V_A.
Probab=29.64 E-value=1.1e+02 Score=20.17 Aligned_cols=49 Identities=18% Similarity=0.265 Sum_probs=24.5
Q ss_pred CHHHHHHHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 392 EREVVEKAVRRLMVGEEGEE--MRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 392 t~~~l~~ai~~ll~~~~~~~--~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
|.++|+++|+++|.+.+... .++=-+++.+.+.-. -...+..+.++|.+
T Consensus 1 td~~i~~~i~~iL~~~dl~~vT~k~vr~~Le~~~~~d---L~~~K~~I~~~I~~ 51 (54)
T PF08766_consen 1 TDEEIREAIREILREADLDTVTKKQVREQLEERFGVD---LSSRKKFIKELIDE 51 (54)
T ss_dssp -HHHHHHHHHHHHTTS-GGG--HHHHHHHHHHH-SS-----SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHhHhhHHHHHHHHHHHHCCC---cHHHHHHHHHHHHH
Confidence 46788999999997654222 333333444444211 12445556665554
No 300
>cd08783 Death_MALT1 Death domain similar to that found in Mucosa-associated lymphoid tissue-lymphoma-translocation gene 1. Death domain (DD) similar to that found in Malt1 (mucosa-associated lymphoid tissue-lymphoma-translocation gene 1). Malt1, together with Bcl10 (B-cell lymphoma 10), are the integral components of the CBM signalosome. They associate with CARD9 to form M-CBM (CBM complex in myeloid immune cells) and with CARMA1 to form L-CBM (CBM complex in lymphoid immune cells), to mediate activation of NF-kB and MAPK by ITAM-coupled receptors expressed on immune cells. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins
Probab=29.08 E-value=2.5e+02 Score=21.24 Aligned_cols=36 Identities=8% Similarity=-0.006 Sum_probs=29.1
Q ss_pred cchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 368 GDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 368 ~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.|+..|....+. +|.+... .+|+.++.+++.++++-
T Consensus 20 ~~~~gWr~LAe~-lg~~~~f--r~S~~el~~cslkvl~p 55 (97)
T cd08783 20 ADGKGWRKLAEL-AGSRGRF--RLSCLDLEQCSLKVLEP 55 (97)
T ss_pred CccCCHHHHHHH-HccCCcc--ccCHHHHHHHHHHHhcC
Confidence 366778888888 5888744 68999999999999985
No 301
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=28.95 E-value=1.5e+02 Score=28.88 Aligned_cols=82 Identities=13% Similarity=0.145 Sum_probs=0.0
Q ss_pred cccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHH---------------HHhcCCcEEEEeccHHH
Q 013342 268 GSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLA---------------EAVQENGCIVKWAPQKE 332 (445)
Q Consensus 268 Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~n~~~~~~~pq~~ 332 (445)
.|...-....+..+++++++.+.++.+-+..+ ...+-. .+..-.+.+.+|+||.+
T Consensus 187 vslF~Ye~~~l~~ll~~~~~~~~pv~llvp~g----------~~~~~~~~~~~~~~~~~g~~~~~g~l~l~~lPF~~Q~~ 256 (374)
T PF10093_consen 187 VSLFCYENAALASLLDAWAASPKPVHLLVPEG----------RALNSLAAWLGDALLQAGDSWQRGNLTLHVLPFVPQDD 256 (374)
T ss_pred EEEEeCCchHHHHHHHHHhcCCCCeEEEecCC----------ccHHHHHHHhccccccCccccccCCeEEEECCCCCHHH
Q ss_pred ---HhhccccCceeeccCchhHHHHHhhCCCcc
Q 013342 333 ---VLSHVAVGGFWSHCGWNSTLECLCEGVPMI 362 (445)
Q Consensus 333 ---lL~~~~~~~~I~HgG~gsv~eal~~GvP~v 362 (445)
+|-.||+ .|| =|==|..-|..+|+|.|
T Consensus 257 yD~LLw~cD~-NfV--RGEDSfVRAqwAgkPFv 286 (374)
T PF10093_consen 257 YDRLLWACDF-NFV--RGEDSFVRAQWAGKPFV 286 (374)
T ss_pred HHHHHHhCcc-ceE--ecchHHHHHHHhCCCce
No 302
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=28.80 E-value=56 Score=32.19 Aligned_cols=27 Identities=26% Similarity=0.239 Sum_probs=23.1
Q ss_pred CCCccChHHHHHHHHHHHhCCCeEEEE
Q 013342 6 SPFQGHMTPMLQLGTILYSNGFSITVV 32 (445)
Q Consensus 6 ~p~~GH~~p~l~La~~L~~~Gh~Vt~~ 32 (445)
..+.|-..-++.|.++|++||+.|.-+
T Consensus 9 ~SG~GKTTvT~glm~aL~~rg~~Vqpf 35 (451)
T COG1797 9 SSGSGKTTVTLGLMRALRRRGLKVQPF 35 (451)
T ss_pred CCCCcHHHHHHHHHHHHHhcCCccccc
Confidence 347788999999999999999999743
No 303
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=28.79 E-value=1.1e+02 Score=27.71 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCCC----CCCCCceEEEcC
Q 013342 14 PMLQLGTILYSNGFSITVVHTHFNPPNP----SNHPEFNFQSIP 53 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~~~~~~~----~~~~~~~~~~l~ 53 (445)
-+.+|+++|.+.| +|+++.+..+.+.. .-...+++..++
T Consensus 15 Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ait~~~pl~~~~~~ 57 (244)
T TIGR00087 15 GIRALYQALKELG-EVTVVAPARQRSGTGHSLTLFEPLRVGQVK 57 (244)
T ss_pred hHHHHHHHHHhCC-CEEEEeCCCCccccccCcCCCCCeEEEEec
Confidence 3678999999988 89999987555442 222335555554
No 304
>PRK07586 hypothetical protein; Validated
Probab=28.60 E-value=2.2e+02 Score=29.09 Aligned_cols=24 Identities=13% Similarity=0.005 Sum_probs=19.5
Q ss_pred eeeccCchhHH------HHHhhCCCcccCC
Q 013342 342 FWSHCGWNSTL------ECLCEGVPMICRP 365 (445)
Q Consensus 342 ~I~HgG~gsv~------eal~~GvP~v~~P 365 (445)
++.|.|-|.++ +|.+.++|+|++.
T Consensus 68 ~~~t~GPG~~N~~~gl~~A~~~~~Pvl~i~ 97 (514)
T PRK07586 68 TLLHLGPGLANGLANLHNARRARTPIVNIV 97 (514)
T ss_pred EEecccHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 77888866544 7899999999986
No 305
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=28.59 E-value=58 Score=28.20 Aligned_cols=33 Identities=9% Similarity=0.073 Sum_probs=24.8
Q ss_pred EEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 3 LVPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 3 ~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
+--+++.|=+.-.+.+.+.|.+.|++|+++.++
T Consensus 5 lgITGs~~a~~a~~~ll~~L~~~g~~V~vI~S~ 37 (187)
T TIGR02852 5 FGLTGSHCTLEAVMPQLEKLVDEGAEVTPIVSE 37 (187)
T ss_pred EEEecHHHHHHHHHHHHHHHHhCcCEEEEEEch
Confidence 334455555555569999999999999988874
No 306
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.59 E-value=84 Score=28.92 Aligned_cols=54 Identities=7% Similarity=0.035 Sum_probs=36.7
Q ss_pred ccccCceeeccCchhHHHHHhh-----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 336 HVAVGGFWSHCGWNSTLECLCE-----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~-----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+++ +|+=||-||++.+++. .+|++.+-..+ + +|. +. +.+.+++.+++.+++++
T Consensus 39 ~~D~--vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G----------~-lGF---L~-~~~~~~~~~~l~~i~~g 97 (264)
T PRK03501 39 NANI--IVSIGGDGTFLQAVRKTGFREDCLYAGISTKD----------Q-LGF---YC-DFHIDDLDKMIQAITKE 97 (264)
T ss_pred CccE--EEEECCcHHHHHHHHHhcccCCCeEEeEecCC----------C-CeE---cc-cCCHHHHHHHHHHHHcC
Confidence 3566 9999999999999875 45655543311 2 221 11 46778889999888876
No 307
>KOG4117 consensus Heat shock factor binding protein [Transcription; Posttranslational modification, protein turnover, chaperones]
Probab=28.40 E-value=1.8e+02 Score=20.02 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=40.2
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 392 EREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 392 t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
.-.+|..-|..+|.+ ...+-..|++.+-..++.-++.-+.+|+=|+++
T Consensus 13 Nmq~LTs~vQ~lLQq-----~QDkFQtMSDQII~RiDDM~~riDDLEKnIaDL 60 (73)
T KOG4117|consen 13 NMQDLTSVVQGLLQQ-----TQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADL 60 (73)
T ss_pred cHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Confidence 457788888889976 788888999999888888899888888888775
No 308
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=28.08 E-value=40 Score=30.38 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=24.3
Q ss_pred CceEEE-EcCCC-CchHHHHHHhCCceEEEccchH
Q 013342 101 QIACII-YDEIF-YFPEAAANQLNLQSIILRTTSA 133 (445)
Q Consensus 101 ~~D~vv-~D~~~-~~~~~~A~~~giP~v~~~~~~~ 133 (445)
-||+++ .|+.. --|..=|.++|||+|.++-+.+
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~ 190 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNC 190 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCC
Confidence 489886 56554 4566778999999999766543
No 309
>PRK13054 lipid kinase; Reviewed
Probab=27.98 E-value=1.8e+02 Score=27.23 Aligned_cols=30 Identities=17% Similarity=-0.002 Sum_probs=23.1
Q ss_pred hccccCceeeccCchhHHHHHhh------C--CCcccCCc
Q 013342 335 SHVAVGGFWSHCGWNSTLECLCE------G--VPMICRPC 366 (445)
Q Consensus 335 ~~~~~~~~I~HgG~gsv~eal~~------G--vP~v~~P~ 366 (445)
...++ +|..||-||++|++.. + +|+-++|.
T Consensus 55 ~~~d~--vvv~GGDGTl~evv~~l~~~~~~~~~~lgiiP~ 92 (300)
T PRK13054 55 LGVAT--VIAGGGDGTINEVATALAQLEGDARPALGILPL 92 (300)
T ss_pred cCCCE--EEEECCccHHHHHHHHHHhhccCCCCcEEEEeC
Confidence 34455 9999999999998644 3 58888996
No 310
>PF08452 DNAP_B_exo_N: DNA polymerase family B exonuclease domain, N-terminal; InterPro: IPR013660 This domain is found in viral DNA polymerases to the N terminus of DNA polymerase family B exonuclease domains (IPR006133 from INTERPRO). ; GO: 0003887 DNA-directed DNA polymerase activity
Probab=27.90 E-value=37 Score=17.63 Aligned_cols=16 Identities=31% Similarity=1.078 Sum_probs=13.1
Q ss_pred hchhhccCCCCceEEE
Q 013342 250 CISWLNNQAPESVIYV 265 (445)
Q Consensus 250 l~~wl~~~~~~~~v~v 265 (445)
+..|.++++++..+|+
T Consensus 5 CiNWFE~~ge~r~lyL 20 (22)
T PF08452_consen 5 CINWFESRGEERFLYL 20 (22)
T ss_pred EeehhhhCCceeEEEE
Confidence 6789988888888876
No 311
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=27.71 E-value=82 Score=27.26 Aligned_cols=33 Identities=9% Similarity=0.252 Sum_probs=25.5
Q ss_pred eEEEEcCCC-CchHHHHHHhCCceEEEccchHHH
Q 013342 103 ACIIYDEIF-YFPEAAANQLNLQSIILRTTSAAT 135 (445)
Q Consensus 103 D~vv~D~~~-~~~~~~A~~~giP~v~~~~~~~~~ 135 (445)
.++|-..+. +.+..+|+++++|.|.+.|+....
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPav~p~ 94 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPAVRPY 94 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCCCCHH
Confidence 466666555 778889999999999998876443
No 312
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=27.56 E-value=39 Score=30.69 Aligned_cols=28 Identities=21% Similarity=0.146 Sum_probs=22.5
Q ss_pred cccCceeeccCchhHHHHHhh----CCCcccCCc
Q 013342 337 VAVGGFWSHCGWNSTLECLCE----GVPMICRPC 366 (445)
Q Consensus 337 ~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~ 366 (445)
+++ +|+-||-||++.+++. ++|++.+-.
T Consensus 26 ~Dl--vi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 26 ADV--IVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CCE--EEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 566 9999999999988665 678877654
No 313
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=27.55 E-value=1.1e+02 Score=30.41 Aligned_cols=26 Identities=12% Similarity=0.078 Sum_probs=21.4
Q ss_pred CceEEEEcCCCCchHHHHHHhCCceEEEc
Q 013342 101 QIACIIYDEIFYFPEAAANQLNLQSIILR 129 (445)
Q Consensus 101 ~~D~vv~D~~~~~~~~~A~~~giP~v~~~ 129 (445)
+||+||.+... ..+|+++|+|++.+.
T Consensus 371 ~pdliig~~~~---~~~a~~~~ip~i~~~ 396 (428)
T cd01965 371 PVDLLIGNSHG---RYLARDLGIPLVRVG 396 (428)
T ss_pred CCCEEEECchh---HHHHHhcCCCEEEec
Confidence 89999999644 568899999998743
No 314
>PRK04328 hypothetical protein; Provisional
Probab=27.51 E-value=4.5e+02 Score=23.75 Aligned_cols=37 Identities=19% Similarity=-0.032 Sum_probs=29.7
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP 38 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~ 38 (445)
++.-.|+.|-..-.+.++..-+++|+.+.+++.+...
T Consensus 27 li~G~pGsGKT~l~~~fl~~~~~~ge~~lyis~ee~~ 63 (249)
T PRK04328 27 LLSGGPGTGKSIFSQQFLWNGLQMGEPGVYVALEEHP 63 (249)
T ss_pred EEEcCCCCCHHHHHHHHHHHHHhcCCcEEEEEeeCCH
Confidence 5667788999888888887777889999999985433
No 315
>KOG0541 consensus Alkyl hydroperoxide reductase/peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=27.49 E-value=58 Score=27.08 Aligned_cols=32 Identities=16% Similarity=0.244 Sum_probs=27.2
Q ss_pred EEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 3 LVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 3 ~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
|.|..++.|+--++.=|++|.++|.+..++.+
T Consensus 55 FtPtCs~~HvPGyi~~a~elksKGVd~iicvS 86 (171)
T KOG0541|consen 55 FTPTCSSSHVPGYIEKADELKSKGVDEIICVS 86 (171)
T ss_pred cCCccccccCchHHHHHHHHHhcCCcEEEEEe
Confidence 45666999999999999999999987776665
No 316
>TIGR00345 arsA arsenite-activated ATPase (arsA). The N-terminal 50 amino acids hits Pfam families NB-ARC and fer4_NifH. residues 4-11 of the seed alignment contain a potential ATP binding site. The function of the gene product is to catalyze the extrusion of the oxyanions arsenite, antimonite and arsenate for detoxification. Some members of this family contain a duplication so the model finds hits twice.
Probab=27.31 E-value=2.1e+02 Score=26.56 Aligned_cols=24 Identities=17% Similarity=0.079 Sum_probs=19.9
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCC
Q 013342 16 LQLGTILYSNGFSITVVHTHFNPP 39 (445)
Q Consensus 16 l~La~~L~~~Gh~Vt~~~~~~~~~ 39 (445)
.++|..++++|++|.+++.+....
T Consensus 3 ~a~a~~~a~~g~~vllv~~Dp~~~ 26 (284)
T TIGR00345 3 CATAIRLAEQGKKVLLVSTDPAHS 26 (284)
T ss_pred HHHHHHHHHCCCeEEEEECCCCCC
Confidence 468889999999999999875543
No 317
>PF03720 UDPG_MGDP_dh_C: UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; InterPro: IPR014027 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the C-terminal substrate-binding domain of these enzymes. Structural studies indicate that this domain forms an incomplete dinucleotide binding fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3GG2_D 1DLI_A 1DLJ_A 2Y0E_D 2Y0D_B 2Y0C_D 1MV8_B 1MUU_A 1MFZ_C 3TDK_B ....
Probab=27.21 E-value=75 Score=24.43 Aligned_cols=22 Identities=27% Similarity=0.382 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEeC
Q 013342 13 TPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 13 ~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
+|.+.|++.|.++|.+|.+.=+
T Consensus 17 Sp~~~l~~~L~~~g~~V~~~DP 38 (106)
T PF03720_consen 17 SPALELIEELKERGAEVSVYDP 38 (106)
T ss_dssp -HHHHHHHHHHHTT-EEEEE-T
T ss_pred CHHHHHHHHHHHCCCEEEEECC
Confidence 7899999999999999888644
No 318
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=27.03 E-value=1.5e+02 Score=25.79 Aligned_cols=28 Identities=21% Similarity=0.039 Sum_probs=22.5
Q ss_pred CceEEEEcCCC--CchHHHHHHhCCceEEE
Q 013342 101 QIACIIYDEIF--YFPEAAANQLNLQSIIL 128 (445)
Q Consensus 101 ~~D~vv~D~~~--~~~~~~A~~~giP~v~~ 128 (445)
++|+|++=... +.|..+|..+|+|++..
T Consensus 50 ~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~v 79 (189)
T PRK09219 50 GITKILTIEASGIAPAVMAALALGVPVVFA 79 (189)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEE
Confidence 78999865433 66788999999999984
No 319
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.02 E-value=2.9e+02 Score=23.32 Aligned_cols=77 Identities=16% Similarity=0.149 Sum_probs=53.1
Q ss_pred chhHHHHHhhCCCcccCC-cccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 013342 348 WNSTLECLCEGVPMICRP-CFGDQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 348 ~gsv~eal~~GvP~v~~P-~~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~ 425 (445)
.-|+.|.-.+|.=-+.== +..=+..|+++.++ .|.=-.+.- ..+.++|.++..+=|+|++...++..+.++.+..+-
T Consensus 87 a~S~~EQasAGLd~Ls~~E~a~f~~LN~aY~~r-FgfPfI~aVkg~~k~~Il~a~~~Rl~n~~e~E~~tAl~eI~rIA~~ 165 (176)
T COG3195 87 AESTSEQASAGLDRLSPEEFARFTELNAAYVER-FGFPFIIAVKGNTKDTILAAFERRLDNDREQEFATALAEIERIALL 165 (176)
T ss_pred hhhHHHHHhcCcccCCHHHHHHHHHHHHHHHHh-cCCceEEeecCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 446777777776443210 01124679999999 698755533 578999999999999987767788888877766553
No 320
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=26.97 E-value=1.2e+02 Score=28.14 Aligned_cols=49 Identities=27% Similarity=0.276 Sum_probs=37.6
Q ss_pred hcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCc-----hHHHHHHhCCceEEEccc
Q 013342 76 NCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYF-----PEAAANQLNLQSIILRTT 131 (445)
Q Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~-----~~~~A~~~giP~v~~~~~ 131 (445)
.-...+.+++++++++.+ +.=+||.|.|+.. ...+|.+.++|++++.-.
T Consensus 130 ~~~p~IKE~vR~~I~~A~-------kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLLD~ 183 (284)
T PF07894_consen 130 DGQPHIKEVVRRMIQQAQ-------KVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILLDE 183 (284)
T ss_pred CCCCCHHHHHHHHHHHhc-------ceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEech
Confidence 345567788888888876 9999999998832 335777999999986543
No 321
>PRK06932 glycerate dehydrogenase; Provisional
Probab=26.91 E-value=2.3e+02 Score=26.82 Aligned_cols=64 Identities=17% Similarity=0.258 Sum_probs=42.1
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcc
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHV 337 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~ 337 (445)
.++.+..+.+|.+. +.+++-++.++.+++.. ... . ... ....+.+.+++|+.+
T Consensus 146 ~gktvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~--------~--~~~---------~~~~~~~l~ell~~s 198 (314)
T PRK06932 146 RGSTLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHK--------G--ASV---------CREGYTPFEEVLKQA 198 (314)
T ss_pred CCCEEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCC--------c--ccc---------cccccCCHHHHHHhC
Confidence 45678899999887 55666666778776543 211 0 000 012356788999999
Q ss_pred ccCceeeccCchh
Q 013342 338 AVGGFWSHCGWNS 350 (445)
Q Consensus 338 ~~~~~I~HgG~gs 350 (445)
|+ ++.|+-.+.
T Consensus 199 Di--v~l~~Plt~ 209 (314)
T PRK06932 199 DI--VTLHCPLTE 209 (314)
T ss_pred CE--EEEcCCCCh
Confidence 99 998888654
No 322
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=26.87 E-value=6.9e+02 Score=25.43 Aligned_cols=134 Identities=17% Similarity=0.143 Sum_probs=77.4
Q ss_pred CceEEEEeccccc-CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccH-H--HHhh
Q 013342 260 ESVIYVSLGSVAS-MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQ-K--EVLS 335 (445)
Q Consensus 260 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq-~--~lL~ 335 (445)
+.+++..-|.... ...+.+...+.-+-+.+.++++.-.++ ..+.+. -.++.++.++++.+.-|... . .++.
T Consensus 293 ~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd----~~le~~-~~~la~~~~~~~~~~i~~~~~la~~i~a 367 (487)
T COG0297 293 PGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGD----PELEEA-LRALASRHPGRVLVVIGYDEPLAHLIYA 367 (487)
T ss_pred CCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCc----HHHHHH-HHHHHHhcCceEEEEeeecHHHHHHHHh
Confidence 3345455555544 233444445555555555554443221 011011 12234556677777755543 3 3566
Q ss_pred ccccCceee-----ccCchhHHHHHhhCCCcccCCccc------chhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHh
Q 013342 336 HVAVGGFWS-----HCGWNSTLECLCEGVPMICRPCFG------DQRVNARYVSHVWRTGLELENELEREVVEKAVRRLM 404 (445)
Q Consensus 336 ~~~~~~~I~-----HgG~gsv~eal~~GvP~v~~P~~~------DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll 404 (445)
.+|+ ++- -||. |=++++++|.+-|+.+..+ |-..++ .... |.|...... +++.++.++++.+
T Consensus 368 gaD~--~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~~-gtGf~f~~~-~~~~l~~al~rA~ 440 (487)
T COG0297 368 GADV--ILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQGV-GTGFLFLQT-NPDHLANALRRAL 440 (487)
T ss_pred cCCE--EEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchh--ccCc-eeEEEEecC-CHHHHHHHHHHHH
Confidence 6665 442 3554 5578999999888888753 333333 5564 899888865 9999999999887
Q ss_pred c
Q 013342 405 V 405 (445)
Q Consensus 405 ~ 405 (445)
.
T Consensus 441 ~ 441 (487)
T COG0297 441 V 441 (487)
T ss_pred H
Confidence 4
No 323
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=26.78 E-value=63 Score=28.92 Aligned_cols=24 Identities=17% Similarity=0.387 Sum_probs=18.8
Q ss_pred ChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 11 HMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 11 H~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
|+..|...|++|.++|++|+++..
T Consensus 47 ~~saMRhfa~~L~~~G~~V~Y~~~ 70 (224)
T PF04244_consen 47 FFSAMRHFADELRAKGFRVHYIEL 70 (224)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE-T
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeC
Confidence 567789999999999999999876
No 324
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=26.67 E-value=87 Score=31.66 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=38.0
Q ss_pred hccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 335 SHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 335 ~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
..+++ +|+=||-||++.+.+. ++|++.|- +-+ +|. . . +++++++.+++.+++.+
T Consensus 261 ~~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGIN-----------~G~-LGF--L-t-~i~~~e~~~~Le~il~G 318 (508)
T PLN02935 261 TKVDL--VITLGGDGTVLWAASMFKGPVPPVVPFS-----------MGS-LGF--M-T-PFHSEQYRDCLDAILKG 318 (508)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEe-----------CCC-cce--e-c-ccCHHHHHHHHHHHHcC
Confidence 45777 9999999999999774 45665541 122 222 2 1 46788999999999876
No 325
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=26.41 E-value=2.4e+02 Score=29.23 Aligned_cols=26 Identities=15% Similarity=0.245 Sum_probs=21.5
Q ss_pred CceeeccCch------hHHHHHhhCCCcccCC
Q 013342 340 GGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 340 ~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
+++++|.|-| .+.+|.+.++|+|++-
T Consensus 72 ~v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 103 (561)
T PRK06048 72 GVCVATSGPGATNLVTGIATAYMDSVPIVALT 103 (561)
T ss_pred eEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3488998855 6789999999999984
No 326
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=26.35 E-value=88 Score=27.74 Aligned_cols=34 Identities=24% Similarity=0.227 Sum_probs=22.8
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
++.+.++-.|-....-++..|..+|++|+++...
T Consensus 92 vl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 125 (213)
T cd02069 92 VLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVM 125 (213)
T ss_pred EEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCC
Confidence 5566666677777777777777777777776653
No 327
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=26.21 E-value=75 Score=26.09 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=28.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
|++.+.+.-||=.-.--+++.|++.|.+|.....
T Consensus 15 vlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~ 48 (143)
T COG2185 15 VLVAKLGLDGHDRGAKVIARALADAGFEVINLGL 48 (143)
T ss_pred EEEeccCccccccchHHHHHHHHhCCceEEecCC
Confidence 4677788889999999999999999999987654
No 328
>PRK07574 formate dehydrogenase; Provisional
Probab=25.93 E-value=5.3e+02 Score=25.30 Aligned_cols=107 Identities=15% Similarity=0.132 Sum_probs=59.3
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcc
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHV 337 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~ 337 (445)
.++.+-.+.+|.+. +.+++-++..+.+++. +.... .+..... ..+ +..+..-.++++.+
T Consensus 191 ~gktVGIvG~G~IG-------~~vA~~l~~fG~~V~~-~dr~~---------~~~~~~~--~~g--~~~~~~l~ell~~a 249 (385)
T PRK07574 191 EGMTVGIVGAGRIG-------LAVLRRLKPFDVKLHY-TDRHR---------LPEEVEQ--ELG--LTYHVSFDSLVSVC 249 (385)
T ss_pred CCCEEEEECCCHHH-------HHHHHHHHhCCCEEEE-ECCCC---------CchhhHh--hcC--ceecCCHHHHhhcC
Confidence 34568899999887 5566666677777643 32221 1111110 011 22345678899999
Q ss_pred ccCceeeccCchhHHHHH---------hhCCCcccCC--cccchhhhHHHHHhh-h-eeeeEe
Q 013342 338 AVGGFWSHCGWNSTLECL---------CEGVPMICRP--CFGDQRVNARYVSHV-W-RTGLEL 387 (445)
Q Consensus 338 ~~~~~I~HgG~gsv~eal---------~~GvP~v~~P--~~~DQ~~na~~v~~~-~-G~g~~~ 387 (445)
|+ ++.|+..+.-.+.+ ..|.=+|-+- -..|+....+.++.. + |+|+.+
T Consensus 250 Dv--V~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV 310 (385)
T PRK07574 250 DV--VTIHCPLHPETEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDV 310 (385)
T ss_pred CE--EEEcCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEec
Confidence 99 99999976544443 2232222111 234666666666552 1 555555
No 329
>PRK13604 luxD acyl transferase; Provisional
Probab=25.91 E-value=1.1e+02 Score=28.96 Aligned_cols=31 Identities=32% Similarity=0.481 Sum_probs=26.9
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVV 32 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~ 32 (445)
++++.+..++-..+..+|+.|.++|..|.-+
T Consensus 40 vIi~HGf~~~~~~~~~~A~~La~~G~~vLrf 70 (307)
T PRK13604 40 ILIASGFARRMDHFAGLAEYLSSNGFHVIRY 70 (307)
T ss_pred EEEeCCCCCChHHHHHHHHHHHHCCCEEEEe
Confidence 5777888888777999999999999999876
No 330
>PRK13059 putative lipid kinase; Reviewed
Probab=25.87 E-value=2.6e+02 Score=26.10 Aligned_cols=29 Identities=10% Similarity=0.016 Sum_probs=22.7
Q ss_pred ccccCceeeccCchhHHHHH---h---hCCCcccCCc
Q 013342 336 HVAVGGFWSHCGWNSTLECL---C---EGVPMICRPC 366 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal---~---~GvP~v~~P~ 366 (445)
.+++ +|.-||-||++|++ . .++|+-++|.
T Consensus 56 ~~d~--vi~~GGDGTv~evv~gl~~~~~~~~lgviP~ 90 (295)
T PRK13059 56 SYKY--ILIAGGDGTVDNVVNAMKKLNIDLPIGILPV 90 (295)
T ss_pred CCCE--EEEECCccHHHHHHHHHHhcCCCCcEEEECC
Confidence 3455 99999999998884 2 3588999996
No 331
>PRK13337 putative lipid kinase; Reviewed
Probab=25.85 E-value=2.7e+02 Score=26.12 Aligned_cols=28 Identities=11% Similarity=-0.009 Sum_probs=21.9
Q ss_pred cccCceeeccCchhHHHHHhh------CCCcccCCc
Q 013342 337 VAVGGFWSHCGWNSTLECLCE------GVPMICRPC 366 (445)
Q Consensus 337 ~~~~~~I~HgG~gsv~eal~~------GvP~v~~P~ 366 (445)
.++ +|.-||-||+.|++.. ..|+-++|.
T Consensus 58 ~d~--vvv~GGDGTl~~vv~gl~~~~~~~~lgiiP~ 91 (304)
T PRK13337 58 FDL--VIAAGGDGTLNEVVNGIAEKENRPKLGIIPV 91 (304)
T ss_pred CCE--EEEEcCCCHHHHHHHHHhhCCCCCcEEEECC
Confidence 455 9999999999998752 347888886
No 332
>COG2818 Tag 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]
Probab=25.82 E-value=2.2e+02 Score=24.54 Aligned_cols=62 Identities=21% Similarity=0.274 Sum_probs=38.5
Q ss_pred ccCCcccchhhhHHHHHhhheeeeEeCc-------------ccCHHHHH----HHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 013342 362 ICRPCFGDQRVNARYVSHVWRTGLELEN-------------ELEREVVE----KAVRRLMVGEEGEEMRQRAKNLKEEIE 424 (445)
Q Consensus 362 v~~P~~~DQ~~na~~v~~~~G~g~~~~~-------------~~t~~~l~----~ai~~ll~~~~~~~~~~~a~~l~~~~~ 424 (445)
-.+|...||......+-+....|+.... .++++.++ +-|.++|+| ..+-+|-.|+...+.
T Consensus 22 WG~p~~Dd~~LFE~l~Le~fQAGLSW~tVL~KRe~freaF~~Fd~~kVA~~~~~dverLl~d---~gIIR~r~KI~A~i~ 98 (188)
T COG2818 22 WGVPLHDDQRLFELLCLEGFQAGLSWLTVLKKREAFREAFHGFDPEKVAAMTEEDVERLLAD---AGIIRNRGKIKATIN 98 (188)
T ss_pred cCCCCCChHHHHHHHHHHHHhccchHHHHHHhHHHHHHHHhcCCHHHHHcCCHHHHHHHHhC---cchhhhHHHHHHHHH
Confidence 3466788888888777654467766521 24455553 357788888 555555556655555
Q ss_pred HH
Q 013342 425 LC 426 (445)
Q Consensus 425 ~~ 426 (445)
++
T Consensus 99 NA 100 (188)
T COG2818 99 NA 100 (188)
T ss_pred HH
Confidence 54
No 333
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=25.72 E-value=1e+02 Score=22.04 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCCeEEEEeCC
Q 013342 14 PMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
--+.+|..|.+.|.+||++...
T Consensus 10 ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 10 IGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp HHHHHHHHHHHTTSEEEEEESS
T ss_pred HHHHHHHHHHHhCcEEEEEecc
Confidence 4578999999999999999874
No 334
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=25.41 E-value=1.1e+02 Score=23.08 Aligned_cols=28 Identities=14% Similarity=0.414 Sum_probs=20.9
Q ss_pred EEcCCCcc--Ch--HHHHHHHHHHHhCCCeEE
Q 013342 3 LVPSPFQG--HM--TPMLQLGTILYSNGFSIT 30 (445)
Q Consensus 3 ~~~~p~~G--H~--~p~l~La~~L~~~Gh~Vt 30 (445)
+++.|..| +. ..|...++.|.++||.|.
T Consensus 2 YIaGPmtG~~~~N~~~f~~~a~~L~~~G~~vv 33 (92)
T PF14359_consen 2 YIAGPMTGLPDYNRPAFNAAAKRLRAKGYEVV 33 (92)
T ss_pred eEeCCcCCCcchHHHHHHHHHHHHHHCCCEEe
Confidence 45666666 44 448899999999998776
No 335
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain is found in methionyl and leucyl tRNA synthetases. ; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 2D5B_A 1A8H_A 1WOY_A 2D54_A 4DLP_A 2CT8_B 2CSX_A 1MED_A 1PFU_A 1PFW_A ....
Probab=25.40 E-value=54 Score=32.18 Aligned_cols=32 Identities=25% Similarity=0.307 Sum_probs=22.7
Q ss_pred CCccChHHHH---HHHHHHHhCCCeEEEEeCCCCC
Q 013342 7 PFQGHMTPML---QLGTILYSNGFSITVVHTHFNP 38 (445)
Q Consensus 7 p~~GH~~p~l---~La~~L~~~Gh~Vt~~~~~~~~ 38 (445)
|-.||+.|++ .+++-++.+||+|.++|+...+
T Consensus 14 lHlGH~~~~l~ADv~aR~~r~~G~~v~~~tGtDeh 48 (391)
T PF09334_consen 14 LHLGHLYPYLAADVLARYLRLRGHDVLFVTGTDEH 48 (391)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHTT-EEEEEEEEE-S
T ss_pred CCCChhHHHHHHHHHHHHHhhcccceeeEEecchh
Confidence 4579999765 5777777899999999974433
No 336
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=25.11 E-value=86 Score=27.69 Aligned_cols=29 Identities=14% Similarity=0.031 Sum_probs=20.8
Q ss_pred CceEEEEcCCCCc-------hHHHHHHhCCceEEEc
Q 013342 101 QIACIIYDEIFYF-------PEAAANQLNLQSIILR 129 (445)
Q Consensus 101 ~~D~vv~D~~~~~-------~~~~A~~~giP~v~~~ 129 (445)
.||+|++|..... |..+.-.+++|+|.+.
T Consensus 93 ~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGVA 128 (208)
T cd06559 93 KPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGVA 128 (208)
T ss_pred CCCEEEEeCCccccCCCcchhheeeeecCCCEEEEE
Confidence 7999999987633 3345556778988853
No 337
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=25.00 E-value=4.5e+02 Score=27.39 Aligned_cols=27 Identities=11% Similarity=0.145 Sum_probs=22.0
Q ss_pred cCceeeccCch------hHHHHHhhCCCcccCC
Q 013342 339 VGGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 339 ~~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
.+++++|.|-| .+.+|...++|+|++.
T Consensus 69 ~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 69 MGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34489998855 6778899999999996
No 338
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=24.89 E-value=6.4e+02 Score=24.40 Aligned_cols=144 Identities=14% Similarity=0.209 Sum_probs=85.6
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhC---------CC-CEEEEECCCCCCCCCccCCchHHHHHHh---c-CCcE
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNS---------KQ-PFLWVIRPSSNNAPEGIDLLPEVLAEAV---Q-ENGC 323 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---------~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~-~n~~ 323 (445)
..++.++||--|- .+.|.+..+++|+..- +. +.+++++++ +.+.+...+.. . .++.
T Consensus 252 ~~~pallvsSTsw--TpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGK--------GPlkE~Y~~~I~~~~~~~v~ 321 (444)
T KOG2941|consen 252 PERPALLVSSTSW--TPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGK--------GPLKEKYSQEIHEKNLQHVQ 321 (444)
T ss_pred cCCCeEEEecCCC--CCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCC--------CchhHHHHHHHHHhccccee
Confidence 4556777765433 4667788888888721 22 456666543 34444432211 1 3344
Q ss_pred EE-Eecc---HHHHhhccccCceeeccCch-----hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 324 IV-KWAP---QKEVLSHVAVGGFWSHCGWN-----STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 324 ~~-~~~p---q~~lL~~~~~~~~I~HgG~g-----sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
+. .|+. +.-+|..+|+|...|-...| -|..-.-+|+|++.+-+ ...-..|++. --|+.. -+.+
T Consensus 322 ~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f----kcl~ELVkh~-eNGlvF---~Ds~ 393 (444)
T KOG2941|consen 322 VCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF----KCLDELVKHG-ENGLVF---EDSE 393 (444)
T ss_pred eeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecc----hhHHHHHhcC-CCceEe---ccHH
Confidence 43 7764 45599999997777666555 35555667888777643 3344455553 455554 3678
Q ss_pred HHHHHHHHHhcC----Cc-HHHHHHHHHHH
Q 013342 395 VVEKAVRRLMVG----EE-GEEMRQRAKNL 419 (445)
Q Consensus 395 ~l~~ai~~ll~~----~~-~~~~~~~a~~l 419 (445)
+|++.+.-+++| .+ ..++|+|+++-
T Consensus 394 eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 394 ELAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 999999888873 21 34555555544
No 339
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=24.83 E-value=5.3e+02 Score=23.48 Aligned_cols=31 Identities=10% Similarity=0.086 Sum_probs=26.1
Q ss_pred cCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 5 PSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 5 ~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
+.|+.|=-.-...||..|++.|+.|.++=..
T Consensus 111 ~~~g~Gktt~a~nLA~~la~~g~~VllID~D 141 (274)
T TIGR03029 111 AKSGEGCSYIAANLAIVFSQLGEKTLLIDAN 141 (274)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 3468888888999999999999999998553
No 340
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=24.65 E-value=1.9e+02 Score=26.95 Aligned_cols=23 Identities=17% Similarity=0.078 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCC
Q 013342 13 TPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 13 ~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
..-+.|++.|.++|++|..+..+
T Consensus 11 ~r~~~~~~~l~~~g~~v~~~g~~ 33 (287)
T TIGR02853 11 ARQLELIRKLEELDAKISLIGFD 33 (287)
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 34678999999999999999875
No 341
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=24.60 E-value=2.6e+02 Score=25.26 Aligned_cols=102 Identities=13% Similarity=0.120 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHhCC-CeEEEEeCCCCCCC------CCCCCCceEEEcCC-CCCCCCCCCChhHHHHHHHHHhcchHHHH
Q 013342 12 MTPMLQLGTILYSNG-FSITVVHTHFNPPN------PSNHPEFNFQSIPD-GLTADDVSTGINILITNLLNVNCQAPFFE 83 (445)
Q Consensus 12 ~~p~l~La~~L~~~G-h~Vt~~~~~~~~~~------~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (445)
++|..++.++|.+.| ..|.++|+ +..+. .-...||+...+.. +...+.. +...-...+.+
T Consensus 105 tt~~~A~~~AL~alg~~RIalvTP-Y~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~-----------ia~i~p~~i~~ 172 (239)
T TIGR02990 105 VTPSSAAVDGLAALGVRRISLLTP-YTPETSRPMAQYFAVRGFEIVNFTCLGLTDDRE-----------MARISPDCIVE 172 (239)
T ss_pred eCHHHHHHHHHHHcCCCEEEEECC-CcHHHHHHHHHHHHhCCcEEeeeeccCCCCCce-----------eeecCHHHHHH
Confidence 467889999999988 77777777 43322 11335788777642 2111111 11112222222
Q ss_pred HHHHHHhhccCCCCCCCCceEEEEcCCCCchHH----HHHHhCCceEEEccchHH
Q 013342 84 CMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEA----AANQLNLQSIILRTTSAA 134 (445)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~----~A~~~giP~v~~~~~~~~ 134 (445)
.+.++.. + .+|.|+..-....... +=+.+|+|++.......+
T Consensus 173 ~~~~~~~--------~-~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNqat~W 218 (239)
T TIGR02990 173 AALAAFD--------P-DADALFLSCTALRAATCAQRIEQAIGKPVVTSNQATAW 218 (239)
T ss_pred HHHHhcC--------C-CCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHHHHHH
Confidence 3333311 2 7899986655544443 334579999885444433
No 342
>PLN02683 pyruvate dehydrogenase E1 component subunit beta
Probab=24.60 E-value=6.3e+02 Score=24.42 Aligned_cols=16 Identities=19% Similarity=0.162 Sum_probs=13.5
Q ss_pred cCHHHHHHHHHHHhcC
Q 013342 391 LEREVVEKAVRRLMVG 406 (445)
Q Consensus 391 ~t~~~l~~ai~~ll~~ 406 (445)
.+++.|.++++++++.
T Consensus 337 p~~~~i~~a~~~~~~~ 352 (356)
T PLN02683 337 PQVEDIVRAAKRACYR 352 (356)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 4889999999999853
No 343
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=24.21 E-value=1.5e+02 Score=32.01 Aligned_cols=21 Identities=24% Similarity=0.115 Sum_probs=15.9
Q ss_pred HHHHHHHHHhCCCeEEEEeCC
Q 013342 15 MLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
....++.|.++|-+..++...
T Consensus 86 ~~~a~~~L~~~~Id~LvvIGG 106 (762)
T cd00764 86 RLQAAYNLIQRGITNLCVIGG 106 (762)
T ss_pred HHHHHHHHHHcCCCEEEEeCC
Confidence 467788888888888777653
No 344
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=23.90 E-value=1.4e+02 Score=23.98 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=22.3
Q ss_pred EEEcCCCccCh--HHHHHHHHHHHhCCCeE-EEEeC
Q 013342 2 VLVPSPFQGHM--TPMLQLGTILYSNGFSI-TVVHT 34 (445)
Q Consensus 2 l~~~~p~~GH~--~p~l~La~~L~~~Gh~V-t~~~~ 34 (445)
+++..+-+|+- .-.+.+|+++.++||+| +++-.
T Consensus 5 iv~~~~Py~~~~~~~al~~A~aa~~~gh~v~~vFf~ 40 (128)
T PRK00207 5 IAVTGPAYGTQQASSAYQFAQALLAEGHELVSVFFY 40 (128)
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHHhCCCCeeEEEEe
Confidence 34444545544 45788999999999994 65544
No 345
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=23.82 E-value=3.7e+02 Score=21.22 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=29.8
Q ss_pred hchhhccCCCCceEEEEecccccC-ChhhHHHHHHHHHhCCCCEEEE
Q 013342 250 CISWLNNQAPESVIYVSLGSVASM-DKKEPEEMAWGLVNSKQPFLWV 295 (445)
Q Consensus 250 l~~wl~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~v~~ 295 (445)
..+|+.. + -+.+|.|-.... +++.+..+++.+.+.+.-.+.+
T Consensus 36 ~~~~l~~--g--Elvlttg~~~~~~~~~~~~~~i~~L~~~~~agL~i 78 (123)
T PF07905_consen 36 PSDWLRG--G--ELVLTTGYALRDDDEEELREFIRELAEKGAAGLGI 78 (123)
T ss_pred HHHhCCC--C--eEEEECCcccCCCCHHHHHHHHHHHHHCCCeEEEE
Confidence 4568762 2 477888877665 5666888999999988765544
No 346
>COG2109 BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism]
Probab=23.81 E-value=3.6e+02 Score=23.49 Aligned_cols=95 Identities=16% Similarity=0.211 Sum_probs=50.3
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC----C-C-CCC-CCCceEEEcCCCCCCCCCCCChhHHHHHHHH
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP----P-N-PSN-HPEFNFQSIPDGLTADDVSTGINILITNLLN 74 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~----~-~-~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 74 (445)
.+++..+.|-....+.+|-+-+-+|..|.++..-... + . ... ..++.|+..++++.-... +.+- + .
T Consensus 32 ~V~TG~GKGKTTAAlG~alRa~GhG~rv~vvQFiKg~~~~GE~~~~~~~~~~v~~~~~~~g~tw~~~--~~~~-d--~-- 104 (198)
T COG2109 32 IVFTGNGKGKTTAALGLALRALGHGLRVGVVQFIKGGWKYGEEAALEKFGLGVEFHGMGEGFTWETQ--DREA-D--I-- 104 (198)
T ss_pred EEEecCCCChhHHHHHHHHHHhcCCCEEEEEEEeecCcchhHHHHHHhhccceeEEecCCceeCCCc--CcHH-H--H--
Confidence 4667778887777766666666667777766531111 1 1 111 135788888765432211 1100 1 1
Q ss_pred HhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCC
Q 013342 75 VNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFY 112 (445)
Q Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~ 112 (445)
..+...+....+.+. + . ++|+||.|.+..
T Consensus 105 ~aa~~~w~~a~~~l~-~-------~-~ydlviLDEl~~ 133 (198)
T COG2109 105 AAAKAGWEHAKEALA-D-------G-KYDLVILDELNY 133 (198)
T ss_pred HHHHHHHHHHHHHHh-C-------C-CCCEEEEehhhH
Confidence 233333333333332 2 2 899999998764
No 347
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=23.77 E-value=77 Score=28.45 Aligned_cols=20 Identities=20% Similarity=0.295 Sum_probs=17.4
Q ss_pred HHHHHHHHHhCCCeEEEEeC
Q 013342 15 MLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~ 34 (445)
-.+||+.|.++||+|+++..
T Consensus 29 G~aLA~~L~~~G~~V~li~r 48 (229)
T PRK06732 29 GKIIAETFLAAGHEVTLVTT 48 (229)
T ss_pred HHHHHHHHHhCCCEEEEEEC
Confidence 36789999999999999875
No 348
>PF09001 DUF1890: Domain of unknown function (DUF1890); InterPro: IPR012033 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. The structure of the Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) protein has been determined but no evidence as to the function is available yet.; PDB: 1KJN_B.
Probab=23.70 E-value=60 Score=26.32 Aligned_cols=22 Identities=27% Similarity=0.359 Sum_probs=18.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeCC
Q 013342 14 PMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
-.+-|+..|.++||+|++++++
T Consensus 15 ~alYl~~~Lk~~G~~v~Va~np 36 (139)
T PF09001_consen 15 SALYLSYKLKKKGFEVVVAGNP 36 (139)
T ss_dssp HHHHHHHHHHCTTEEEEEEE-H
T ss_pred HHHHHHHHHHhcCCeEEEecCH
Confidence 3678899999999999999884
No 349
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.68 E-value=62 Score=29.94 Aligned_cols=58 Identities=10% Similarity=0.048 Sum_probs=38.0
Q ss_pred HHHHhhccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhc
Q 013342 330 QKEVLSHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMV 405 (445)
Q Consensus 330 q~~lL~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~ 405 (445)
+.++...+++ +|+=||-||++.+.+. ++|++.+-.. + +|-.. +.+++++.+++.++++
T Consensus 36 ~~~~~~~~d~--vi~iGGDGT~L~aa~~~~~~~~PilgIn~G-----------~---lGFL~--~~~~~~~~~~l~~~~~ 97 (272)
T PRK02231 36 LEEIGQRAQL--AIVIGGDGNMLGRARVLAKYDIPLIGINRG-----------N---LGFLT--DIDPKNAYEQLEACLE 97 (272)
T ss_pred hHHhCcCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeCC-----------C---Ccccc--cCCHHHHHHHHHHHHh
Confidence 3445456777 9999999999988653 5787766321 1 22111 3566777777777776
No 350
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=23.53 E-value=1.5e+02 Score=23.46 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=27.4
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVH 33 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~ 33 (445)
+++..+..++-.-+..+++.|+++|+.|..+.
T Consensus 2 vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~ 33 (145)
T PF12695_consen 2 VVLLHGWGGSRRDYQPLAEALAEQGYAVVAFD 33 (145)
T ss_dssp EEEECTTTTTTHHHHHHHHHHHHTTEEEEEES
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 56777777788889999999999999999883
No 351
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=23.50 E-value=1.5e+02 Score=21.37 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=26.8
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVH 33 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~ 33 (445)
++...++.|=-.-...|+..|++.|++|.++.
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 44555678888889999999999999998876
No 352
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated
Probab=23.35 E-value=1.5e+02 Score=29.83 Aligned_cols=28 Identities=21% Similarity=0.208 Sum_probs=23.9
Q ss_pred CCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 7 PFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 7 p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
...|-..-...|++.|+++|++|..+-+
T Consensus 13 s~~GKT~it~~L~~~L~~~G~~V~~fK~ 40 (451)
T PRK01077 13 SGSGKTTVTLGLMRALRRRGLRVQPFKV 40 (451)
T ss_pred CCCcHHHHHHHHHHHHHhCCCCcceeec
Confidence 4567788889999999999999998855
No 353
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=23.30 E-value=1.2e+02 Score=27.59 Aligned_cols=37 Identities=16% Similarity=0.003 Sum_probs=31.9
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP 38 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~ 38 (445)
++..-|+.|...-...+|..++++|+.|.++..+...
T Consensus 4 ~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~~~ 40 (254)
T cd00550 4 FFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDPAH 40 (254)
T ss_pred EEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCCcc
Confidence 4555689999999999999999999999999987643
No 354
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=23.24 E-value=96 Score=26.43 Aligned_cols=110 Identities=11% Similarity=0.137 Sum_probs=56.8
Q ss_pred cChHHHHHHHHHH-HhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCC-----------CCCCC-------CCC--ChhHH
Q 013342 10 GHMTPMLQLGTIL-YSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDG-----------LTADD-------VST--GINIL 68 (445)
Q Consensus 10 GH~~p~l~La~~L-~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~-------~~~--~~~~~ 68 (445)
+.+.-.+..|+.| .+.|.+|.+.-+. ....+.+..++..+.++-. ...+. ... ++..+
T Consensus 17 ~~~e~~v~~a~~~~~~~g~dViIsRG~-ta~~lr~~~~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~ 95 (176)
T PF06506_consen 17 ASLEEAVEEARQLLESEGADVIISRGG-TAELLRKHVSIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESI 95 (176)
T ss_dssp --HHHHHHHHHHHHTTTT-SEEEEEHH-HHHHHHCC-SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHH
T ss_pred ecHHHHHHHHHHhhHhcCCeEEEECCH-HHHHHHHhCCCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHH
Confidence 4566778899999 7899999997763 2222212225666666510 00000 000 12111
Q ss_pred HHHHHHH--------hcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHH
Q 013342 69 ITNLLNV--------NCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAA 134 (445)
Q Consensus 69 ~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~ 134 (445)
. .+.. .....+...+.++.++ +.|+||.+.. ....|+++|+|++.+.++..+
T Consensus 96 ~--~ll~~~i~~~~~~~~~e~~~~i~~~~~~---------G~~viVGg~~---~~~~A~~~gl~~v~i~sg~es 155 (176)
T PF06506_consen 96 E--ELLGVDIKIYPYDSEEEIEAAIKQAKAE---------GVDVIVGGGV---VCRLARKLGLPGVLIESGEES 155 (176)
T ss_dssp H--HHHT-EEEEEEESSHHHHHHHHHHHHHT---------T--EEEESHH---HHHHHHHTTSEEEESS--HHH
T ss_pred H--HHhCCceEEEEECCHHHHHHHHHHHHHc---------CCcEEECCHH---HHHHHHHcCCcEEEEEecHHH
Confidence 1 1111 1334444566666553 8899999953 457899999999998775544
No 355
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=23.22 E-value=3.1e+02 Score=27.72 Aligned_cols=104 Identities=16% Similarity=0.138 Sum_probs=65.2
Q ss_pred EeccHHH---HhhccccCceeec--cCchhHH-HHHhhCCC----cccCCcccchhhhHHHHHhhheeeeEeCcccCHHH
Q 013342 326 KWAPQKE---VLSHVAVGGFWSH--CGWNSTL-ECLCEGVP----MICRPCFGDQRVNARYVSHVWRTGLELENELEREV 395 (445)
Q Consensus 326 ~~~pq~~---lL~~~~~~~~I~H--gG~gsv~-eal~~GvP----~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~ 395 (445)
.-+|+.+ ++..+|+ ++||- -|+|-|. |-+++-.| ++++-- .|=..++ |+-++.+++ .+.++
T Consensus 338 ~~~~~~~l~alyr~ADv-~lVTplRDGMNLVAkEyva~q~~~~~GvLILSe------fAGaA~~-L~~AllVNP-~d~~~ 408 (474)
T PRK10117 338 QHFDRKLLMKIFRYSDV-GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQ------FAGAANE-LTSALIVNP-YDRDE 408 (474)
T ss_pred CCCCHHHHHHHHHhccE-EEecccccccccccchheeeecCCCCccEEEec------ccchHHH-hCCCeEECC-CCHHH
Confidence 3456654 5667777 55553 4777554 66665443 122211 1112233 455677776 78899
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 396 VEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 396 l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+++||.+.|+-+. +.=+++.++|.+.+++. +..+=++.|++++
T Consensus 409 ~A~Ai~~AL~Mp~-~Er~~R~~~l~~~v~~~-----dv~~W~~~fL~~L 451 (474)
T PRK10117 409 VAAALDRALTMPL-AERISRHAEMLDVIVKN-----DINHWQECFISDL 451 (474)
T ss_pred HHHHHHHHHcCCH-HHHHHHHHHHHHHhhhC-----CHHHHHHHHHHHH
Confidence 9999999998543 45677777777777775 7777778777764
No 356
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated
Probab=23.20 E-value=3.4e+02 Score=28.14 Aligned_cols=26 Identities=15% Similarity=0.271 Sum_probs=21.7
Q ss_pred CceeeccCch------hHHHHHhhCCCcccCC
Q 013342 340 GGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 340 ~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
+++++|.|-| .+.+|...++|+|++-
T Consensus 69 gv~~vt~GPG~~N~l~gl~~A~~~~~Pvl~i~ 100 (574)
T PRK06466 69 GVVLVTSGPGATNAITGIATAYMDSIPMVVLS 100 (574)
T ss_pred EEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 3488898855 7889999999999995
No 357
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=23.14 E-value=5.2e+02 Score=24.17 Aligned_cols=113 Identities=10% Similarity=-0.109 Sum_probs=59.0
Q ss_pred CCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCC
Q 013342 223 VPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNN 302 (445)
Q Consensus 223 ~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~ 302 (445)
.+-.|+|....++.. .-....++..+..+.+-+++-.-........+...+..+.++++++|..+++=++.+...
T Consensus 96 ~pdrf~~~~~v~p~~-----~~~a~~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~ 170 (293)
T COG2159 96 YPDRFVGFARVDPRD-----PEAAAEELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGG 170 (293)
T ss_pred CCcceeeeeeeCCCc-----hHHHHHHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCC
Confidence 455666766665543 111122455555433333343333333333455567889999999999998865433111
Q ss_pred CCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccC--chhHHHH
Q 013342 303 APEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCG--WNSTLEC 354 (445)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG--~gsv~ea 354 (445)
. . +... ......=.+.+-..++++-++.|+| ..=..|+
T Consensus 171 ~-~----~~~~---------~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 171 A-G----LEKG---------HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred c-c----cccC---------CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHH
Confidence 0 0 0000 0001111233555778888999999 5444444
No 358
>cd01421 IMPCH Inosine monophosphate cyclohydrolase domain. This is the N-terminal domain in the purine biosynthesis pathway protein ATIC (purH). The bifunctional ATIC protein contains a C-terminal ATIC formylase domain that formylates 5-aminoimidazole-4-carboxamide-ribonucleotide. The IMPCH domain then converts the formyl-5-aminoimidazole-4-carboxamide-ribonucleotide to inosine monophosphate. This is the final step in de novo purine production.
Probab=23.04 E-value=1.7e+02 Score=25.39 Aligned_cols=42 Identities=12% Similarity=0.159 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCC--CCCC
Q 013342 14 PMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPD--GLTA 58 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~--~~~~ 58 (445)
-+..+|+.|.+.|.++. .|. .-.... +..|+.+..+.+ ++|+
T Consensus 12 ~l~~lAk~L~~lGf~I~-AT~-GTAk~L-~e~GI~v~~V~k~TgfpE 55 (187)
T cd01421 12 GLVEFAKELVELGVEIL-STG-GTAKFL-KEAGIPVTDVSDITGFPE 55 (187)
T ss_pred cHHHHHHHHHHCCCEEE-Ecc-HHHHHH-HHcCCeEEEhhhccCCcH
Confidence 46789999999999994 443 222222 334787777763 4554
No 359
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=22.96 E-value=2.4e+02 Score=27.14 Aligned_cols=36 Identities=8% Similarity=0.216 Sum_probs=21.7
Q ss_pred cCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCE
Q 013342 256 NQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPF 292 (445)
Q Consensus 256 ~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 292 (445)
+.+++.+||++-|--. ..+.....+.+|-++....+
T Consensus 127 ~nP~k~vVF~avGFET-TaP~~A~~i~~A~~~~~~Nf 162 (364)
T PRK15062 127 ENPDKEVVFFAIGFET-TAPATAATLLQAKAEGLKNF 162 (364)
T ss_pred HCCCCeEEEEecCchh-ccHHHHHHHHHHHHcCCCCE
Confidence 4578889999888443 34444555555555543443
No 360
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.87 E-value=1.6e+02 Score=24.59 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=25.8
Q ss_pred CceEEEEcCCC----------CchHHHHHHhCCceEEEccchHH
Q 013342 101 QIACIIYDEIF----------YFPEAAANQLNLQSIILRTTSAA 134 (445)
Q Consensus 101 ~~D~vv~D~~~----------~~~~~~A~~~giP~v~~~~~~~~ 134 (445)
+||+|++-.-. .-+..+|+++|+|++-.+....+
T Consensus 124 ~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETSA~tg~ 167 (219)
T KOG0081|consen 124 NPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETSACTGT 167 (219)
T ss_pred CCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeeccccCc
Confidence 99999986544 13567899999999987666544
No 361
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.86 E-value=48 Score=30.77 Aligned_cols=53 Identities=21% Similarity=0.133 Sum_probs=34.9
Q ss_pred ccccCceeeccCchhHHHHHhh---CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 336 HVAVGGFWSHCGWNSTLECLCE---GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~---GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+++ +|+-||-||+++++.. ++|++.++... +|.- . .++++++.+++.+++++
T Consensus 57 ~~d~--vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~------------lGFl---~-~~~~~~~~~~l~~i~~g 112 (277)
T PRK03708 57 DVDF--IIAIGGDGTILRIEHKTKKDIPILGINMGT------------LGFL---T-EVEPEETFFALSRLLEG 112 (277)
T ss_pred CCCE--EEEEeCcHHHHHHHHhcCCCCeEEEEeCCC------------CCcc---c-cCCHHHHHHHHHHHHcC
Confidence 4566 9999999999999853 45777776421 1111 1 34567777777777765
No 362
>PF12500 TRSP: TRSP domain C terminus to PRTase_2 ; InterPro: IPR022537 This domain is found in bacteria, and is typically between 174 and 217 amino acids in length. There is a conserved TRSP sequence motif.
Probab=22.77 E-value=1.7e+02 Score=24.54 Aligned_cols=30 Identities=20% Similarity=0.016 Sum_probs=24.6
Q ss_pred CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013342 7 PFQGHMTPMLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 7 p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
++-=++++-+.||++|.++|.+|.|=++..
T Consensus 64 GTgEfMy~Pl~lA~~Le~~g~~V~~qSTTR 93 (155)
T PF12500_consen 64 GTGEFMYLPLLLAEELEQAGADVRYQSTTR 93 (155)
T ss_pred ccchHHHHHHHHHHHHHhcCCceEEeCCCC
Confidence 334478899999999999999999987743
No 363
>PRK06487 glycerate dehydrogenase; Provisional
Probab=22.72 E-value=3.1e+02 Score=25.98 Aligned_cols=63 Identities=17% Similarity=0.164 Sum_probs=41.6
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcc
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHV 337 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~ 337 (445)
.++.+-.+.+|.+. +.+++-++.++.+++..-... -+. ...++.-+++|+.+
T Consensus 147 ~gktvgIiG~G~IG-------~~vA~~l~~fgm~V~~~~~~~----------~~~-----------~~~~~~l~ell~~s 198 (317)
T PRK06487 147 EGKTLGLLGHGELG-------GAVARLAEAFGMRVLIGQLPG----------RPA-----------RPDRLPLDELLPQV 198 (317)
T ss_pred CCCEEEEECCCHHH-------HHHHHHHhhCCCEEEEECCCC----------Ccc-----------cccccCHHHHHHhC
Confidence 45678999999887 556666666787775442111 000 12345778899999
Q ss_pred ccCceeeccCchh
Q 013342 338 AVGGFWSHCGWNS 350 (445)
Q Consensus 338 ~~~~~I~HgG~gs 350 (445)
|+ ++.|+-.+.
T Consensus 199 Di--v~l~lPlt~ 209 (317)
T PRK06487 199 DA--LTLHCPLTE 209 (317)
T ss_pred CE--EEECCCCCh
Confidence 98 888888653
No 364
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=22.65 E-value=5.6e+02 Score=24.18 Aligned_cols=71 Identities=11% Similarity=0.003 Sum_probs=42.3
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccc
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVA 338 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~ 338 (445)
++.+.++.+|++. +.+++-++..|.+++..-... ... +++. .+.....-.++|+.+|
T Consensus 136 g~tvgIvG~G~IG-------~~vA~~l~afG~~V~~~~~~~--------~~~-~~~~-------~~~~~~~l~e~l~~aD 192 (312)
T PRK15469 136 DFTIGILGAGVLG-------SKVAQSLQTWGFPLRCWSRSR--------KSW-PGVQ-------SFAGREELSAFLSQTR 192 (312)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEEeCCC--------CCC-CCce-------eecccccHHHHHhcCC
Confidence 4568899999887 556666667788765432111 000 0110 1112234567899999
Q ss_pred cCceeeccCchhHHHH
Q 013342 339 VGGFWSHCGWNSTLEC 354 (445)
Q Consensus 339 ~~~~I~HgG~gsv~ea 354 (445)
+ ++.|+-.+.-.+.
T Consensus 193 v--vv~~lPlt~~T~~ 206 (312)
T PRK15469 193 V--LINLLPNTPETVG 206 (312)
T ss_pred E--EEECCCCCHHHHH
Confidence 9 9999887654443
No 365
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=22.65 E-value=87 Score=26.97 Aligned_cols=30 Identities=17% Similarity=0.295 Sum_probs=22.2
Q ss_pred CCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013342 6 SPFQGHMTPMLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 6 ~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
+++.|-+. ...|.+.|.++|++|.++.++.
T Consensus 7 tGsiaa~k-a~~lir~L~~~g~~V~vv~T~~ 36 (181)
T TIGR00421 7 TGASGVIY-GIRLLEVLKEAGVEVHLVISDW 36 (181)
T ss_pred ECHHHHHH-HHHHHHHHHHCCCEEEEEECcc
Confidence 34444443 4789999999999999988843
No 366
>PRK05920 aromatic acid decarboxylase; Validated
Probab=22.60 E-value=1e+02 Score=27.07 Aligned_cols=29 Identities=10% Similarity=0.039 Sum_probs=23.3
Q ss_pred CccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013342 8 FQGHMTPMLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 8 ~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
+-...+=...+.+.|.+.||+|+++.++.
T Consensus 12 Gsiaa~ka~~lvr~L~~~g~~V~vi~T~~ 40 (204)
T PRK05920 12 GASGAIYGVRLLECLLAADYEVHLVISKA 40 (204)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEChh
Confidence 33444678899999999999999998853
No 367
>PRK13055 putative lipid kinase; Reviewed
Probab=22.43 E-value=3.7e+02 Score=25.62 Aligned_cols=29 Identities=14% Similarity=0.059 Sum_probs=22.4
Q ss_pred ccccCceeeccCchhHHHHHhh------CCCcccCCc
Q 013342 336 HVAVGGFWSHCGWNSTLECLCE------GVPMICRPC 366 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~------GvP~v~~P~ 366 (445)
..++ +|--||-||++|++.. .+|+-++|.
T Consensus 59 ~~d~--vvv~GGDGTl~evvngl~~~~~~~~LgiiP~ 93 (334)
T PRK13055 59 GFDL--IIAAGGDGTINEVVNGIAPLEKRPKMAIIPA 93 (334)
T ss_pred CCCE--EEEECCCCHHHHHHHHHhhcCCCCcEEEECC
Confidence 3455 8889999999998743 467888896
No 368
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=22.33 E-value=1.2e+02 Score=27.22 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=30.8
Q ss_pred EEEcC--CCccChHHHHHHHHHHHhCCCeEEEEeCCCCCC
Q 013342 2 VLVPS--PFQGHMTPMLQLGTILYSNGFSITVVHTHFNPP 39 (445)
Q Consensus 2 l~~~~--p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~ 39 (445)
.++++ ++-|-..-...|+.+|+.+|+.|.++-.+....
T Consensus 5 IVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~DiGLR 44 (272)
T COG2894 5 IVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDIGLR 44 (272)
T ss_pred EEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCcCch
Confidence 34555 488899999999999999999999998764443
No 369
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=22.29 E-value=1.1e+02 Score=26.20 Aligned_cols=29 Identities=21% Similarity=0.120 Sum_probs=22.8
Q ss_pred CccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013342 8 FQGHMTPMLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 8 ~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
+-+...-...+.+.|.++|++|.++.++.
T Consensus 9 Gs~~a~~~~~ll~~L~~~g~~V~vi~T~~ 37 (177)
T TIGR02113 9 GSIAAYKAADLTSQLTKLGYDVTVLMTQA 37 (177)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEChH
Confidence 34455566799999999999999988853
No 370
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=22.28 E-value=6.3e+02 Score=23.39 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=29.6
Q ss_pred EeccHHHHhhccccCceeecc-CchhHHHHHhhCCCcccC
Q 013342 326 KWAPQKEVLSHVAVGGFWSHC-GWNSTLECLCEGVPMICR 364 (445)
Q Consensus 326 ~~~pq~~lL~~~~~~~~I~Hg-G~gsv~eal~~GvP~v~~ 364 (445)
++=|+.+.|..++. +|+-. ..+...||+..|+|+-+.
T Consensus 234 g~NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 234 GYNPYIDMLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CCCchHHHHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 45589999999998 66554 577889999999998654
No 371
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=22.26 E-value=2.8e+02 Score=26.92 Aligned_cols=10 Identities=40% Similarity=0.859 Sum_probs=8.8
Q ss_pred CCCcccCCcc
Q 013342 358 GVPMICRPCF 367 (445)
Q Consensus 358 GvP~v~~P~~ 367 (445)
++|+|+||..
T Consensus 122 ~~P~i~IPTt 131 (375)
T cd08194 122 GLPLIAIPTT 131 (375)
T ss_pred CCCEEEECCC
Confidence 6899999985
No 372
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=22.22 E-value=1.1e+02 Score=26.80 Aligned_cols=32 Identities=13% Similarity=0.109 Sum_probs=24.4
Q ss_pred CceEEE-EcCCC-CchHHHHHHhCCceEEEccch
Q 013342 101 QIACII-YDEIF-YFPEAAANQLNLQSIILRTTS 132 (445)
Q Consensus 101 ~~D~vv-~D~~~-~~~~~~A~~~giP~v~~~~~~ 132 (445)
.||+|| .|+.. .-+..=|.++|||+|.++-+.
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn 141 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCDTD 141 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEeeCC
Confidence 688886 56555 557777999999999976654
No 373
>PRK00090 bioD dithiobiotin synthetase; Reviewed
Probab=22.22 E-value=5.3e+02 Score=22.53 Aligned_cols=27 Identities=19% Similarity=0.205 Sum_probs=24.3
Q ss_pred CCccChHHHHHHHHHHHhCCCeEEEEe
Q 013342 7 PFQGHMTPMLQLGTILYSNGFSITVVH 33 (445)
Q Consensus 7 p~~GH~~p~l~La~~L~~~Gh~Vt~~~ 33 (445)
...|-..-.+.|++.|.++|++|.++=
T Consensus 9 t~~GKT~vs~~L~~~l~~~g~~v~~~K 35 (222)
T PRK00090 9 TDVGKTVVTAALAQALREAGYSVAGYK 35 (222)
T ss_pred CCcCHHHHHHHHHHHHHHcCCceEEEe
Confidence 578899999999999999999998865
No 374
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=22.17 E-value=1.6e+02 Score=28.98 Aligned_cols=48 Identities=10% Similarity=0.137 Sum_probs=0.0
Q ss_pred HHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchH----------HHHHHhCCceEE
Q 013342 71 NLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPE----------AAANQLNLQSII 127 (445)
Q Consensus 71 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~----------~~A~~~giP~v~ 127 (445)
+++.+...+....+++-+.+. +||++|+-+.+-.+. .+.++++||.+.
T Consensus 55 nYf~en~eea~~~i~~mv~k~---------~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt 112 (431)
T TIGR01917 55 SFFGENLEEAKAKVLEMIKGA---------NPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFT 112 (431)
T ss_pred hhhhhCHHHHHHHHHHHHHhc---------CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEE
No 375
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=22.02 E-value=1.6e+02 Score=28.93 Aligned_cols=28 Identities=14% Similarity=0.202 Sum_probs=20.8
Q ss_pred CceEEEEcCCCCch----------HHHHHHhCCceEEE
Q 013342 101 QIACIIYDEIFYFP----------EAAANQLNLQSIIL 128 (445)
Q Consensus 101 ~~D~vv~D~~~~~~----------~~~A~~~giP~v~~ 128 (445)
+||++|+-+.+-.+ ..+.++++||.+.-
T Consensus 76 ~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~ 113 (431)
T TIGR01918 76 EPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTS 113 (431)
T ss_pred CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 99999998876321 13567799999984
No 376
>PRK03094 hypothetical protein; Provisional
Probab=21.98 E-value=82 Score=22.97 Aligned_cols=20 Identities=10% Similarity=0.380 Sum_probs=16.3
Q ss_pred HHHHHHHHHhCCCeEEEEeC
Q 013342 15 MLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~ 34 (445)
+-.|.+.|.++||+|.=+..
T Consensus 10 Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 10 LTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred cHHHHHHHHHCCCEEEecCc
Confidence 45689999999999986654
No 377
>PF14626 RNase_Zc3h12a_2: Zc3h12a-like Ribonuclease NYN domain
Probab=21.96 E-value=88 Score=24.67 Aligned_cols=29 Identities=7% Similarity=0.124 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 12 MTPMLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 12 ~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
+.|++.+.-.+.-+||.+|++.+......
T Consensus 9 Vk~L~eIll~FilrGHKT~vyLP~yY~~~ 37 (122)
T PF14626_consen 9 VKALVEILLHFILRGHKTVVYLPKYYKNY 37 (122)
T ss_pred HHHHHHHHHHHHhccCeeEEEChHHHhcc
Confidence 46777788888889999999999755543
No 378
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=21.92 E-value=1e+02 Score=30.24 Aligned_cols=28 Identities=21% Similarity=0.393 Sum_probs=23.2
Q ss_pred CCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 7 PFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 7 p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
.-.||+-|+..|. .|+++||+|+++...
T Consensus 46 lHlGhlv~l~kL~-~fQ~aGh~~ivLigd 73 (401)
T COG0162 46 LHLGHLVPLMKLR-RFQDAGHKPIVLIGD 73 (401)
T ss_pred cchhhHHHHHHHH-HHHHCCCeEEEEecc
Confidence 3568999988875 588999999999874
No 379
>PF02780 Transketolase_C: Transketolase, C-terminal domain; InterPro: IPR005476 Transketolase 2.2.1.1 from EC (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources [, ] show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Pichia angusta (Yeast) (Hansenula polymorpha), there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) 2.2.1.3 from EC (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates. 1-deoxyxylulose-5-phosphate synthase (DXP synthase) [] is an enzyme so far found in bacteria (gene dxs) and plants (gene CLA1) which catalyzes the thiamine pyrophosphoate-dependent acyloin condensation reaction between carbon atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (dxp), a precursor in the biosynthetic pathway to isoprenoids, thiamine (vitamin B1), and pyridoxol (vitamin B6). DXP synthase is evolutionary related to TK. The N-terminal section, contains a histidine residue which appears to function in proton transfer during catalysis []. In the central section there are conserved acidic residues that are part of the active cleft and may participate in substrate-binding []. This family includes transketolase enzymes 2.2.1.1 from EC and also partially matches to 2-oxoisovalerate dehydrogenase beta subunit P37941 from SWISSPROT 1.2.4.4 from EC. Both these enzymes utilise thiamine pyrophosphate as a cofactor, suggesting there may be common aspects in their mechanism of catalysis.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1NGS_B 1TKA_A 1TRK_B 1TKB_A 1GPU_B 1AY0_B 1TKC_B 2E6K_A 3JU3_A 2R8P_B ....
Probab=21.79 E-value=1.3e+02 Score=23.64 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=23.1
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
+++++++. +...+..++.|.+.|.+++++..
T Consensus 13 ~iia~G~~--~~~al~A~~~L~~~Gi~~~vi~~ 43 (124)
T PF02780_consen 13 TIIAYGSM--VEEALEAAEELEEEGIKAGVIDL 43 (124)
T ss_dssp EEEEETTH--HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEeehHH--HHHHHHHHHHHHHcCCceeEEee
Confidence 55666655 35678888899888988888765
No 380
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=21.74 E-value=3.4e+02 Score=28.07 Aligned_cols=90 Identities=14% Similarity=0.112 Sum_probs=49.5
Q ss_pred EecccccCCh-hhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEec-cHHH---------Hh
Q 013342 266 SLGSVASMDK-KEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWA-PQKE---------VL 334 (445)
Q Consensus 266 s~Gs~~~~~~-~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~-pq~~---------lL 334 (445)
|.||...+.. ..-+.+++.|++.|.+.+.-+.++.. ..+-..+.+ .+++.++.-. .+.+ +-
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~L~~~GV~~vFgvpG~~~------~~l~dal~~--~~~i~~i~~~hE~~A~~~Adgyar~t 74 (564)
T PRK08155 3 SSGTTSTRKRFTGAELIVRLLERQGIRIVTGIPGGAI------LPLYDALSQ--STQIRHILARHEQGAGFIAQGMARTT 74 (564)
T ss_pred CCCCCccCCcccHHHHHHHHHHHcCCCEEEeCCCccc------HHHHHHHhc--cCCceEEEeccHHHHHHHHHHHHHHc
Confidence 3454444332 34566888888888888777744311 011112210 1233333211 1111 11
Q ss_pred hccccCceeeccCch------hHHHHHhhCCCcccCC
Q 013342 335 SHVAVGGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 335 ~~~~~~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
..+.+ +++|.|-| .+.+|...++|+|++.
T Consensus 75 g~~gv--~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 75 GKPAV--CMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCCeE--EEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 23444 88888855 7889999999999985
No 381
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=21.72 E-value=1.4e+02 Score=26.75 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=25.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCe
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFS 28 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~ 28 (445)
|+|...|+.|--.....|.++|+++||.
T Consensus 4 Vvi~G~P~SGKstrA~~L~~~l~~~~~K 31 (281)
T KOG3062|consen 4 VVICGLPCSGKSTRAVELREALKERGTK 31 (281)
T ss_pred EEEeCCCCCCchhHHHHHHHHHHhhccc
Confidence 4677779999999999999999999975
No 382
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=21.62 E-value=5e+02 Score=21.92 Aligned_cols=86 Identities=15% Similarity=0.176 Sum_probs=44.4
Q ss_pred CcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhh
Q 013342 198 SSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKE 277 (445)
Q Consensus 198 ~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~ 277 (445)
....++-+-++.-......++..+ |++..+|..+..... ..+.++.+.++...+ -+|+|++|+ |.+
T Consensus 47 ~~v~llG~~~~~~~~~~~~l~~~y-p~l~i~g~~~g~~~~-------~~~~~i~~~I~~~~p-div~vglG~-----PkQ 112 (171)
T cd06533 47 LRVFLLGAKPEVLEKAAERLRARY-PGLKIVGYHHGYFGP-------EEEEEIIERINASGA-DILFVGLGA-----PKQ 112 (171)
T ss_pred CeEEEECCCHHHHHHHHHHHHHHC-CCcEEEEecCCCCCh-------hhHHHHHHHHHHcCC-CEEEEECCC-----CHH
Confidence 344455555444334444566666 777777754433221 122235666664332 399999993 334
Q ss_pred HHHHHHHHHhCCCCEEEEEC
Q 013342 278 PEEMAWGLVNSKQPFLWVIR 297 (445)
Q Consensus 278 ~~~~~~al~~~~~~~v~~~~ 297 (445)
-..+.+-....+..++..++
T Consensus 113 E~~~~~~~~~l~~~v~~~vG 132 (171)
T cd06533 113 ELWIARHKDRLPVPVAIGVG 132 (171)
T ss_pred HHHHHHHHHHCCCCEEEEec
Confidence 44444444455556555553
No 383
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=21.51 E-value=4.1e+02 Score=25.07 Aligned_cols=64 Identities=13% Similarity=0.093 Sum_probs=40.4
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcc
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHV 337 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~ 337 (445)
.++.+-.+.+|.+. +.+++-++.++.+++.. .+.. . .. . ....+.+.+++|+.+
T Consensus 144 ~gktvGIiG~G~IG-------~~vA~~~~~fgm~V~~~-d~~~-------~--~~-------~--~~~~~~~l~ell~~s 197 (311)
T PRK08410 144 KGKKWGIIGLGTIG-------KRVAKIAQAFGAKVVYY-STSG-------K--NK-------N--EEYERVSLEELLKTS 197 (311)
T ss_pred CCCEEEEECCCHHH-------HHHHHHHhhcCCEEEEE-CCCc-------c--cc-------c--cCceeecHHHHhhcC
Confidence 45679999999887 44555555667776543 2210 0 00 0 012456788999999
Q ss_pred ccCceeeccCch
Q 013342 338 AVGGFWSHCGWN 349 (445)
Q Consensus 338 ~~~~~I~HgG~g 349 (445)
|+ ++.|+-.+
T Consensus 198 Dv--v~lh~Plt 207 (311)
T PRK08410 198 DI--ISIHAPLN 207 (311)
T ss_pred CE--EEEeCCCC
Confidence 98 88887755
No 384
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.49 E-value=1.1e+02 Score=31.71 Aligned_cols=53 Identities=23% Similarity=0.320 Sum_probs=38.1
Q ss_pred ccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 336 HVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+++ +|+-||-||++.+.+. ++|++.|-+ -+ +|. +. +.+++++.+++.+++++
T Consensus 348 ~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGin~-----------G~-lGF---L~-~~~~~~~~~~l~~~~~g 404 (569)
T PRK14076 348 EISH--IISIGGDGTVLRASKLVNGEEIPIICINM-----------GT-VGF---LT-EFSKEEIFKAIDSIISG 404 (569)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcC-----------CC-CCc---Cc-ccCHHHHHHHHHHHHcC
Confidence 4566 9999999999999774 678776643 12 232 11 46778888888888876
No 385
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.43 E-value=61 Score=30.57 Aligned_cols=29 Identities=10% Similarity=0.138 Sum_probs=23.9
Q ss_pred ccccCceeeccCchhHHHHHhh----CCCcccCCc
Q 013342 336 HVAVGGFWSHCGWNSTLECLCE----GVPMICRPC 366 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~ 366 (445)
++++ +|+-||-||+++++.. ++|++.+..
T Consensus 57 ~~d~--vi~~GGDGT~l~~~~~~~~~~~pv~gin~ 89 (305)
T PRK02645 57 LIDL--AIVLGGDGTVLAAARHLAPHDIPILSVNV 89 (305)
T ss_pred CcCE--EEEECCcHHHHHHHHHhccCCCCEEEEec
Confidence 4666 9999999999999864 778887765
No 386
>PRK08674 bifunctional phosphoglucose/phosphomannose isomerase; Validated
Probab=21.39 E-value=7.1e+02 Score=23.67 Aligned_cols=55 Identities=11% Similarity=0.195 Sum_probs=37.8
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGL 56 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~ 56 (445)
+++...-.|...-++..++.+.++|..|..+|........+...+..+..+|.+.
T Consensus 81 lvI~iS~SG~T~e~~~a~~~a~~~ga~vIaIT~~~~L~~~a~~~~~~~i~ip~~~ 135 (337)
T PRK08674 81 LVIAVSYSGNTEETLSAVEQALKRGAKIIAITSGGKLKEMAKEHGLPVIIVPGGY 135 (337)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHCCCeEEEECCCchHHHHHHhcCCeEEEeCCCC
Confidence 3445556778888999999999999998888863321222233467788888554
No 387
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=21.38 E-value=95 Score=26.73 Aligned_cols=33 Identities=24% Similarity=0.237 Sum_probs=24.4
Q ss_pred EEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013342 3 LVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 3 ~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
+.-+++.|=+ -...+.+.|.++|++|.++.++.
T Consensus 6 l~vtGsiaa~-~~~~li~~L~~~g~~V~vv~T~~ 38 (182)
T PRK07313 6 LAVSGSIAAY-KAADLTSQLTKRGYQVTVLMTKA 38 (182)
T ss_pred EEEeChHHHH-HHHHHHHHHHHCCCEEEEEEChh
Confidence 3344444444 47899999999999999988853
No 388
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=21.38 E-value=4.7e+02 Score=24.93 Aligned_cols=66 Identities=18% Similarity=0.275 Sum_probs=40.9
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccc
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVA 338 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~ 338 (445)
.+.+=.+.+|.+. +.++.-++..+.+++.--... .|+.. +. .-..|++.+++|..+|
T Consensus 146 gktvGIiG~GrIG-------~avA~r~~~Fgm~v~y~~~~~----------~~~~~-~~-----~~~~y~~l~ell~~sD 202 (324)
T COG1052 146 GKTLGIIGLGRIG-------QAVARRLKGFGMKVLYYDRSP----------NPEAE-KE-----LGARYVDLDELLAESD 202 (324)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhcCCCEEEEECCCC----------ChHHH-hh-----cCceeccHHHHHHhCC
Confidence 4557778888776 445555555666765543221 11111 00 1267888999999999
Q ss_pred cCceeeccCch
Q 013342 339 VGGFWSHCGWN 349 (445)
Q Consensus 339 ~~~~I~HgG~g 349 (445)
+ ++-||..+
T Consensus 203 i--i~l~~Plt 211 (324)
T COG1052 203 I--ISLHCPLT 211 (324)
T ss_pred E--EEEeCCCC
Confidence 8 88888754
No 389
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=21.37 E-value=3.2e+02 Score=26.40 Aligned_cols=11 Identities=27% Similarity=0.612 Sum_probs=9.4
Q ss_pred CCCcccCCccc
Q 013342 358 GVPMICRPCFG 368 (445)
Q Consensus 358 GvP~v~~P~~~ 368 (445)
++|+|+||...
T Consensus 122 ~~p~i~VPTt~ 132 (370)
T cd08551 122 ALPLIAIPTTA 132 (370)
T ss_pred CCCEEEecCCC
Confidence 79999999853
No 390
>PRK08617 acetolactate synthase; Reviewed
Probab=21.22 E-value=2.9e+02 Score=28.54 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=21.2
Q ss_pred CceeeccCch------hHHHHHhhCCCcccCC
Q 013342 340 GGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 340 ~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
+++++|.|-| .+.+|...++|+|++.
T Consensus 69 gv~~vt~GpG~~N~l~gl~~A~~~~~Pvlvis 100 (552)
T PRK08617 69 GVVLVTSGPGVSNLATGLVTATAEGDPVVAIG 100 (552)
T ss_pred EEEEECCCCcHhHhHHHHHHHhhcCCCEEEEe
Confidence 3388888855 7888999999999985
No 391
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=21.13 E-value=3.1e+02 Score=27.75 Aligned_cols=104 Identities=16% Similarity=0.144 Sum_probs=60.3
Q ss_pred EeccHHH---HhhccccCceee--ccCchhH-HHHHhhCCC---cccCCcccchhhhHHHHHhhhe-eeeEeCcccCHHH
Q 013342 326 KWAPQKE---VLSHVAVGGFWS--HCGWNST-LECLCEGVP---MICRPCFGDQRVNARYVSHVWR-TGLELENELEREV 395 (445)
Q Consensus 326 ~~~pq~~---lL~~~~~~~~I~--HgG~gsv-~eal~~GvP---~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~t~~~ 395 (445)
+-+|+.+ ++..+|+ ++|| ..|+|.+ .|-+++..+ ++++ =++.-| .+. |+ .++.+++ .+.++
T Consensus 359 ~~~~~~~~~aly~~aDv-~lvTslrDGmNLva~Eyva~q~~~~GvLiL----SefaGa--a~~-L~~~al~VNP-~d~~~ 429 (474)
T PF00982_consen 359 RSLSFEELLALYRAADV-ALVTSLRDGMNLVAKEYVACQDDNPGVLIL----SEFAGA--AEQ-LSEAALLVNP-WDIEE 429 (474)
T ss_dssp S---HHHHHHHHHH-SE-EEE--SSBS--HHHHHHHHHS-TS--EEEE----ETTBGG--GGT--TTS-EEE-T-T-HHH
T ss_pred cCCCHHHHHHHHHhhhh-EEecchhhccCCcceEEEEEecCCCCceEe----eccCCH--HHH-cCCccEEECC-CChHH
Confidence 5566655 6667887 5554 5788855 577777665 2222 122222 233 55 4477776 68899
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 396 VEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 396 l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+++||.+.|+=+. +.-+++.+++.+.++.. +...=+++++++|
T Consensus 430 ~A~ai~~AL~M~~-~Er~~r~~~~~~~v~~~-----~~~~W~~~~l~~L 472 (474)
T PF00982_consen 430 VADAIHEALTMPP-EERKERHARLREYVREH-----DVQWWAESFLRDL 472 (474)
T ss_dssp HHHHHHHHHT--H-HHHHHHHHHHHHHHHHT------HHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCH-HHHHHHHHHHHHHhHhC-----CHHHHHHHHHHHh
Confidence 9999999998432 45677777888888875 8888889888876
No 392
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=21.08 E-value=4.3e+02 Score=22.86 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=16.9
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
+|+..+..-|-.-+..+++.|.+.|-.|.+++-
T Consensus 112 i~v~S~~~~d~~~i~~~~~~lkk~~I~v~vI~~ 144 (187)
T cd01452 112 AFVGSPIEEDEKDLVKLAKRLKKNNVSVDIINF 144 (187)
T ss_pred EEEecCCcCCHHHHHHHHHHHHHcCCeEEEEEe
Confidence 444444444444444555555555555555544
No 393
>TIGR00313 cobQ cobyric acid synthase CobQ.
Probab=21.01 E-value=8.7e+02 Score=24.54 Aligned_cols=29 Identities=21% Similarity=0.290 Sum_probs=24.5
Q ss_pred CCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 7 PFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 7 p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
...|-..-...|++.|+++|.+|..+=+.
T Consensus 8 t~vGKT~v~~~L~~~l~~~G~~v~~fKp~ 36 (475)
T TIGR00313 8 SSAGKSTLTAGLCRILARRGYRVAPFKSQ 36 (475)
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEEEECCc
Confidence 35777888999999999999999987663
No 394
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=21.00 E-value=86 Score=22.91 Aligned_cols=21 Identities=10% Similarity=0.313 Sum_probs=17.5
Q ss_pred HHHHHHHHHhCCCeEEEEeCC
Q 013342 15 MLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
+-.+.++|.++||+|+=+...
T Consensus 10 Ls~v~~~L~~~GyeVv~l~~~ 30 (80)
T PF03698_consen 10 LSNVKEALREKGYEVVDLENE 30 (80)
T ss_pred chHHHHHHHHCCCEEEecCCc
Confidence 457889999999999987754
No 395
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=20.87 E-value=1.9e+02 Score=27.90 Aligned_cols=10 Identities=20% Similarity=0.587 Sum_probs=8.9
Q ss_pred CCCcccCCcc
Q 013342 358 GVPMICRPCF 367 (445)
Q Consensus 358 GvP~v~~P~~ 367 (445)
++|+|+||..
T Consensus 124 ~~P~i~VPTt 133 (357)
T cd08181 124 ALPVVAIPTT 133 (357)
T ss_pred CCCEEEEeCC
Confidence 7899999985
No 396
>COG4566 TtrR Response regulator [Signal transduction mechanisms]
Probab=20.79 E-value=4.3e+02 Score=23.04 Aligned_cols=50 Identities=18% Similarity=0.142 Sum_probs=36.1
Q ss_pred HhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 355 LCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 355 l~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.-...|+|.+--++|=++--+.+.. |+-=.+.+.++...|.++|.+.+..
T Consensus 73 ~~~~~PVIfiTGhgDIpmaV~AmK~--GAvDFLeKP~~~q~Lldav~~Al~~ 122 (202)
T COG4566 73 RGIRLPVIFLTGHGDIPMAVQAMKA--GAVDFLEKPFSEQDLLDAVERALAR 122 (202)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHc--chhhHHhCCCchHHHHHHHHHHHHH
Confidence 3446788888888888775555444 5554555578889999999999875
No 397
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=20.78 E-value=1.2e+02 Score=30.10 Aligned_cols=26 Identities=4% Similarity=-0.118 Sum_probs=21.7
Q ss_pred CceEEEEcCCCCchHHHHHHhCCceEEEc
Q 013342 101 QIACIIYDEIFYFPEAAANQLNLQSIILR 129 (445)
Q Consensus 101 ~~D~vv~D~~~~~~~~~A~~~giP~v~~~ 129 (445)
+||++|.... ...+|+++|||++.+.
T Consensus 369 ~pDliig~~~---~~~~a~k~giP~~~~~ 394 (421)
T cd01976 369 KPDLIGSGIK---EKYVFQKMGIPFRQMH 394 (421)
T ss_pred CCCEEEecCc---chhhhhhcCCCeEeCC
Confidence 9999998865 5568999999998754
No 398
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=20.77 E-value=1.4e+02 Score=26.40 Aligned_cols=32 Identities=9% Similarity=0.105 Sum_probs=23.1
Q ss_pred CceEEEEcCCC--CchHHHHHHhCCceEEEccch
Q 013342 101 QIACIIYDEIF--YFPEAAANQLNLQSIILRTTS 132 (445)
Q Consensus 101 ~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~ 132 (445)
+||+||..... .....-....+||++.+....
T Consensus 60 ~PDlIi~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 93 (238)
T PF01497_consen 60 KPDLIIGSSFYGQSEEIEKLLEAGIPVVVFDSSS 93 (238)
T ss_dssp --SEEEEETTSSCHHHHHHHHHTTSEEEEESSTT
T ss_pred CCCEEEEeccccchHHHHHHhcccceEEEeeccc
Confidence 99999988766 344556667899999987765
No 399
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=20.70 E-value=7.9e+02 Score=25.63 Aligned_cols=143 Identities=13% Similarity=0.124 Sum_probs=74.9
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccc
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVA 338 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~ 338 (445)
+++.|-|-+||.. +...+++....|++++..+-..+.+- -..|+.+.+ |+-+-. -...+
T Consensus 409 ~~~~v~i~~gs~s--d~~~~~~~~~~l~~~g~~~~~~v~sa--------hr~~~~~~~----------~~~~~~-~~~~~ 467 (577)
T PLN02948 409 GTPLVGIIMGSDS--DLPTMKDAAEILDSFGVPYEVTIVSA--------HRTPERMFS----------YARSAH-SRGLQ 467 (577)
T ss_pred CCCeEEEEECchh--hHHHHHHHHHHHHHcCCCeEEEEECC--------ccCHHHHHH----------HHHHHH-HCCCC
Confidence 3456777777764 77788899999999998765544222 123444321 111111 11233
Q ss_pred cCceeeccCchhHHHHHh---hCCCcccCCcccchh-hhHH--HHHhhh--eeeeEe---CcccCHHHHHHHHHHHhcCC
Q 013342 339 VGGFWSHCGWNSTLECLC---EGVPMICRPCFGDQR-VNAR--YVSHVW--RTGLEL---ENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 339 ~~~~I~HgG~gsv~eal~---~GvP~v~~P~~~DQ~-~na~--~v~~~~--G~g~~~---~~~~t~~~l~~ai~~ll~~~ 407 (445)
+ +|.-.|.-.-+-... .-+|+|.||....-. .... -+.+ + |+.+.. +....+.-++..| --+.|
T Consensus 468 v--~i~~ag~~~~l~~~~a~~t~~pvi~vp~~~~~~~g~~~l~s~~~-~p~g~pv~~v~i~~~~~aa~~a~~i-~~~~~- 542 (577)
T PLN02948 468 V--IIAGAGGAAHLPGMVASMTPLPVIGVPVKTSHLDGLDSLLSIVQ-MPRGVPVATVAIGNATNAGLLAVRM-LGASD- 542 (577)
T ss_pred E--EEEEcCccccchHHHhhccCCCEEEcCCCCCCCCcHHHHHHHhc-CCCCCeEEEEecCChHHHHHHHHHH-HhcCC-
Confidence 4 777666443333332 246999999853211 1122 2333 4 532221 2233444444333 12235
Q ss_pred cHHHHHHHHHHHHHHHHHHHhc
Q 013342 408 EGEEMRQRAKNLKEEIELCITE 429 (445)
Q Consensus 408 ~~~~~~~~a~~l~~~~~~~~~~ 429 (445)
+.++++.+..++.+++.+..
T Consensus 543 --~~~~~~~~~~~~~~~~~~~~ 562 (577)
T PLN02948 543 --PDLLDKMEAYQEDMRDMVLE 562 (577)
T ss_pred --HHHHHHHHHHHHHHHHHHHh
Confidence 67888888887777776443
No 400
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=20.66 E-value=1.4e+02 Score=26.00 Aligned_cols=45 Identities=18% Similarity=0.169 Sum_probs=30.4
Q ss_pred HHHHHHHhhccCCCCCCCCceEEEEcCCCC--chHHHHHHhCCceEEEccchHH
Q 013342 83 ECMVRMMEQQQQHPAGDDQIACIIYDEIFY--FPEAAANQLNLQSIILRTTSAA 134 (445)
Q Consensus 83 ~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~--~~~~~A~~~giP~v~~~~~~~~ 134 (445)
++++.+.+... ++.-+|.|+|.. -.+.+|..+|..++.+-....+
T Consensus 179 ~l~~~lI~~~t-------~~gdiVlDpF~GSGTT~~aa~~l~R~~ig~E~~~~y 225 (231)
T PF01555_consen 179 ELIERLIKAST-------NPGDIVLDPFAGSGTTAVAAEELGRRYIGIEIDEEY 225 (231)
T ss_dssp HHHHHHHHHHS--------TT-EEEETT-TTTHHHHHHHHTT-EEEEEESSHHH
T ss_pred HHHHHHHHhhh-------ccceeeehhhhccChHHHHHHHcCCeEEEEeCCHHH
Confidence 47777777765 777889999983 3457899999999987655443
No 401
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=20.64 E-value=2.1e+02 Score=25.70 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=30.5
Q ss_pred CCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 7 PFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 7 p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
|+-|-..-.+.||-+|+++|-.|+++=.+++...
T Consensus 11 GGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~pl 44 (231)
T PF07015_consen 11 GGAGKTTAAMALASELAARGARVALIDADPNQPL 44 (231)
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCcH
Confidence 7899999999999999999999999988776654
No 402
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=20.50 E-value=6.8e+02 Score=23.32 Aligned_cols=70 Identities=13% Similarity=0.055 Sum_probs=45.7
Q ss_pred ccCchhHHHHHhhCCCcccCCccc--chhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 013342 345 HCGWNSTLECLCEGVPMICRPCFG--DQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEGEEMRQRAKNLKE 421 (445)
Q Consensus 345 HgG~gsv~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~ 421 (445)
+.|.+.+..++.+|+....+-++. +..+-+..+.+. - +.+.+.-|.++|.+.+.+ ++- +-|-+..+.+.+
T Consensus 201 ~rG~~~~~~ai~~G~~~tG~TvH~v~~~~D~G~Ii~Q~-~--v~I~~~dt~~~L~~r~~~-~E~---~~~~~ai~~~~~ 272 (286)
T PRK13011 201 FKGAKPYHQAYERGVKLIGATAHYVTDDLDEGPIIEQD-V--ERVDHAYSPEDLVAKGRD-VEC---LTLARAVKAHIE 272 (286)
T ss_pred CCCCcHHHHHHHCCCCeEEEEEEEEcCCCcCCCcEEEE-E--EEcCCCCCHHHHHHHHHH-HHH---HHHHHHHHHHHh
Confidence 468899999999999988777642 333334444442 2 233335689999999977 443 567776666553
No 403
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=20.49 E-value=8e+02 Score=23.89 Aligned_cols=46 Identities=17% Similarity=0.278 Sum_probs=35.5
Q ss_pred HhcCCcEEEEeccHHH---HhhccccCceeeccC----chhHHHHHhhCCCcccC
Q 013342 317 AVQENGCIVKWAPQKE---VLSHVAVGGFWSHCG----WNSTLECLCEGVPMICR 364 (445)
Q Consensus 317 ~~~~n~~~~~~~pq~~---lL~~~~~~~~I~HgG----~gsv~eal~~GvP~v~~ 364 (445)
.+.+++.+.+-+|++. +|.+.++ |++-.= .-++.||..+|.|+|..
T Consensus 249 ~l~~rV~~lG~v~h~~Vr~vl~~G~I--FlntSlTEafc~~ivEAaScGL~VVsT 301 (426)
T KOG1111|consen 249 FLQDRVVMLGTVPHDRVRDVLVRGDI--FLNTSLTEAFCMVIVEAASCGLPVVST 301 (426)
T ss_pred hccCceEEecccchHHHHHHHhcCcE--EeccHHHHHHHHHHHHHHhCCCEEEEe
Confidence 3578999999999976 7888887 775332 22678999999999865
No 404
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=20.45 E-value=5.7e+02 Score=27.79 Aligned_cols=116 Identities=9% Similarity=0.011 Sum_probs=64.6
Q ss_pred cCCcEEE-EeccHHH--HhhccccCceeec-----cCchhHHHHHhhCCCcccCCcc-cchhhhHHHHHhhheeeeEe--
Q 013342 319 QENGCIV-KWAPQKE--VLSHVAVGGFWSH-----CGWNSTLECLCEGVPMICRPCF-GDQRVNARYVSHVWRTGLEL-- 387 (445)
Q Consensus 319 ~~n~~~~-~~~pq~~--lL~~~~~~~~I~H-----gG~gsv~eal~~GvP~v~~P~~-~DQ~~na~~v~~~~G~g~~~-- 387 (445)
++++.++ +|=-..+ +.+.+|+=+..+. ||.+.+ -|+.+|++.+.+--. ++...+. . .|-++--
T Consensus 546 ~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgM-KA~~NG~LnlSvlDGww~E~~~g----~-nGwaig~~~ 619 (778)
T cd04299 546 RGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGM-KAALNGGLNLSVLDGWWDEGYDG----E-NGWAIGDGD 619 (778)
T ss_pred CCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchH-HHHHcCCeeeecccCccccccCC----C-CceEeCCCc
Confidence 4566655 5544433 7888999777788 887554 555599999999862 2222222 1 1222211
Q ss_pred ---C---c-ccCHHHHHHHHHHHhcCCcHHHHHHH-----HHHHHHHHHHHHhc---CCChHHHHHHHHHHh
Q 013342 388 ---E---N-ELEREVVEKAVRRLMVGEEGEEMRQR-----AKNLKEEIELCITE---GGSSYKSLNEFLEFI 444 (445)
Q Consensus 388 ---~---~-~~t~~~l~~ai~~ll~~~~~~~~~~~-----a~~l~~~~~~~~~~---~g~~~~~~~~~~~~~ 444 (445)
+ . ..+++.|-+.+.+.+- +.|-++ -.++-+.+++++.. .=+..|.+.++++.+
T Consensus 620 ~~~~~~~~d~~da~~Ly~~Le~~i~----p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 620 EYEDDEYQDAEEAEALYDLLENEVI----PLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred cccChhhcchhhHHHHHHHHHHHHH----HHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 1 1 4667777677744332 344332 23455555554443 446667777777653
No 405
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=20.44 E-value=2e+02 Score=23.47 Aligned_cols=39 Identities=15% Similarity=0.190 Sum_probs=29.3
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECC
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRP 298 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~ 298 (445)
...+|++++||-.....+.++.+++.+.. +.+++++...
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~~-~~~ivlv~~~ 88 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALGP-DRQVYLVNPH 88 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcCC-CCEEEEEECC
Confidence 34589999999888777888888888753 5677776543
No 406
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=20.40 E-value=87 Score=32.40 Aligned_cols=94 Identities=17% Similarity=0.210 Sum_probs=46.9
Q ss_pred cHHHHhhccccCceeecc-Cch-hHHHHHhhCCCcccCCccc-chhhhHH--HHHhhheeeeEeCcccCHHHHHHHHHHH
Q 013342 329 PQKEVLSHVAVGGFWSHC-GWN-STLECLCEGVPMICRPCFG-DQRVNAR--YVSHVWRTGLELENELEREVVEKAVRRL 403 (445)
Q Consensus 329 pq~~lL~~~~~~~~I~Hg-G~g-sv~eal~~GvP~v~~P~~~-DQ~~na~--~v~~~~G~g~~~~~~~t~~~l~~ai~~l 403 (445)
++.+++..|+++.|-|== -|| |-+||+..|||.|.-=+.+ -++.+-. .-.. .|+-+.=+...+.++..+.+.+.
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~-~GV~VvdR~~~n~~e~v~~la~~ 540 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEE-YGVYVVDRRDKNYDESVNQLADF 540 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGG-GTEEEE-SSSS-HHHHHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcC-CcEEEEeCCCCCHHHHHHHHHHH
Confidence 555566666663332210 133 8899999999999876532 2221110 1123 36655544466777777777776
Q ss_pred hcC----C--cHHHHHHHHHHHHHHH
Q 013342 404 MVG----E--EGEEMRQRAKNLKEEI 423 (445)
Q Consensus 404 l~~----~--~~~~~~~~a~~l~~~~ 423 (445)
|.+ . +-...|++|+++++.+
T Consensus 541 l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 541 LYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 632 1 0134566666666543
No 407
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.24 E-value=1.6e+02 Score=26.58 Aligned_cols=31 Identities=6% Similarity=-0.076 Sum_probs=20.7
Q ss_pred CceEEEEcCCCCc--hH-HHHHHhCCceEEEccc
Q 013342 101 QIACIIYDEIFYF--PE-AAANQLNLQSIILRTT 131 (445)
Q Consensus 101 ~~D~vv~D~~~~~--~~-~~A~~~giP~v~~~~~ 131 (445)
+||+||....... .. .+.+.+|||++.+...
T Consensus 74 ~PDLIi~~~~~~~~~~~~~l~~~~gipvv~~~~~ 107 (262)
T cd01147 74 KPDVVIDVGSDDPTSIADDLQKKTGIPVVVLDGG 107 (262)
T ss_pred CCCEEEEecCCccchhHHHHHHhhCCCEEEEecC
Confidence 9999998755432 12 2334589999887653
No 408
>PRK06436 glycerate dehydrogenase; Provisional
Probab=20.21 E-value=4e+02 Score=25.11 Aligned_cols=65 Identities=6% Similarity=0.024 Sum_probs=40.4
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcc
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHV 337 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~ 337 (445)
.++.+-++.+|.+. +.++.-++..|.+++..-... .+.+. ...+.+.+++++.+
T Consensus 121 ~gktvgIiG~G~IG-------~~vA~~l~afG~~V~~~~r~~----------~~~~~---------~~~~~~l~ell~~a 174 (303)
T PRK06436 121 YNKSLGILGYGGIG-------RRVALLAKAFGMNIYAYTRSY----------VNDGI---------SSIYMEPEDIMKKS 174 (303)
T ss_pred CCCEEEEECcCHHH-------HHHHHHHHHCCCEEEEECCCC----------cccCc---------ccccCCHHHHHhhC
Confidence 45668899999887 344455556677764432111 00110 11245678899999
Q ss_pred ccCceeeccCchh
Q 013342 338 AVGGFWSHCGWNS 350 (445)
Q Consensus 338 ~~~~~I~HgG~gs 350 (445)
|+ ++.|+..+.
T Consensus 175 Di--v~~~lp~t~ 185 (303)
T PRK06436 175 DF--VLISLPLTD 185 (303)
T ss_pred CE--EEECCCCCc
Confidence 99 999998664
No 409
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=20.09 E-value=1.1e+02 Score=29.72 Aligned_cols=66 Identities=20% Similarity=0.270 Sum_probs=44.7
Q ss_pred cCceeeccCchhHHHHHhh------------C-----CCcccCCcccchhhhHHHHHhhheeeeEeCc-----ccCHHHH
Q 013342 339 VGGFWSHCGWNSTLECLCE------------G-----VPMICRPCFGDQRVNARYVSHVWRTGLELEN-----ELEREVV 396 (445)
Q Consensus 339 ~~~~I~HgG~gsv~eal~~------------G-----vP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-----~~t~~~l 396 (445)
.++++|.||..+.+.|+.+ | .|+|.++-.. +.-+.+.+.. +|+|+..-+ .++.++|
T Consensus 104 ~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa~~-lGlg~~~I~~~~~~~md~~~L 181 (373)
T PF00282_consen 104 AGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAARI-LGLGVRKIPTDEDGRMDIEAL 181 (373)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHHHH-TTSEEEEE-BBTTSSB-HHHH
T ss_pred CceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhcce-eeeEEEEecCCcchhhhHHHh
Confidence 5579999998888777533 2 4566665444 4666677777 799966522 6888999
Q ss_pred HHHHHHHhcC
Q 013342 397 EKAVRRLMVG 406 (445)
Q Consensus 397 ~~ai~~ll~~ 406 (445)
+++|.+..++
T Consensus 182 ~~~l~~~~~~ 191 (373)
T PF00282_consen 182 EKALEKDIAN 191 (373)
T ss_dssp HHHHHHHHHT
T ss_pred hhhhcccccc
Confidence 9999887654
No 410
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif. They are found associated with IS21 family insertion sequences []. Functionally they have not been characterised, but they may be involved in transposition [].; GO: 0005524 ATP binding; PDB: 3EC2_A 3ECC_A 2W58_A 2QGZ_A.
Probab=20.05 E-value=1.3e+02 Score=25.62 Aligned_cols=33 Identities=15% Similarity=0.315 Sum_probs=23.2
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
+|+..++.|-..=..++++++..+|+.|.|++.
T Consensus 51 ~l~G~~G~GKThLa~ai~~~~~~~g~~v~f~~~ 83 (178)
T PF01695_consen 51 ILYGPPGTGKTHLAVAIANEAIRKGYSVLFITA 83 (178)
T ss_dssp EEEESTTSSHHHHHHHHHHHHHHTT--EEEEEH
T ss_pred EEEhhHhHHHHHHHHHHHHHhccCCcceeEeec
Confidence 456666777666788888888888888887764
Done!