Query 013342
Match_columns 445
No_of_seqs 134 out of 1425
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 08:46:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 8.1E-70 2.8E-74 535.2 34.3 425 1-445 16-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 4.5E-65 1.5E-69 511.3 33.6 431 1-444 11-477 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 2.4E-61 8.1E-66 482.7 42.6 429 1-444 9-467 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.3E-61 4.3E-66 481.6 34.8 425 1-444 10-450 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 4.6E-59 1.6E-63 464.5 36.8 417 1-444 12-461 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.7E-44 1.3E-48 354.9 26.2 386 1-440 15-416 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.1E-43 3.8E-48 348.7 25.1 354 1-444 25-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 8.9E-42 3E-46 336.8 22.3 359 1-425 3-384 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 3.7E-41 1.3E-45 332.5 18.4 365 1-440 3-395 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 6E-40 2.1E-44 323.8 23.9 371 1-442 23-410 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 8.6E-40 2.9E-44 321.3 20.7 349 1-425 3-367 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 5.2E-39 1.8E-43 315.5 23.5 370 1-441 7-394 (402)
13 2p6p_A Glycosyl transferase; X 100.0 3.3E-37 1.1E-41 301.1 29.7 347 1-441 3-375 (384)
14 2yjn_A ERYCIII, glycosyltransf 100.0 1E-37 3.6E-42 310.1 26.0 367 1-440 23-430 (441)
15 2iyf_A OLED, oleandomycin glyc 100.0 2.2E-37 7.5E-42 306.9 25.8 370 1-441 10-395 (430)
16 4fzr_A SSFS6; structural genom 100.0 2.8E-35 9.7E-40 288.7 19.6 352 1-440 18-395 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.7E-34 5.9E-39 283.1 23.1 340 1-440 23-392 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.8E-33 6E-38 275.3 16.7 346 1-440 4-383 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 9.2E-31 3.1E-35 257.7 27.9 353 1-441 23-404 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 3.7E-28 1.3E-32 234.7 24.0 306 1-407 5-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 2.4E-27 8.2E-32 203.9 14.1 160 246-425 7-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 7.2E-19 2.5E-23 169.6 20.8 307 1-417 9-331 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 5.8E-16 2E-20 136.5 8.3 133 257-404 25-197 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 7.8E-13 2.7E-17 121.4 21.7 116 259-389 156-274 (282)
25 3c48_A Predicted glycosyltrans 99.4 2E-10 6.7E-15 113.2 25.5 345 8-424 41-410 (438)
26 2jjm_A Glycosyl transferase, g 99.2 1.1E-09 3.7E-14 106.4 23.0 303 9-406 27-350 (394)
27 3fro_A GLGA glycogen synthase; 99.2 2.8E-09 9.5E-14 104.7 24.1 350 9-422 18-413 (439)
28 3okp_A GDP-mannose-dependent a 99.2 2.6E-09 8.8E-14 103.4 21.4 299 8-407 18-345 (394)
29 1vgv_A UDP-N-acetylglucosamine 99.2 1.5E-10 5.1E-15 112.0 11.8 129 259-406 204-342 (384)
30 1v4v_A UDP-N-acetylglucosamine 99.2 8.1E-11 2.8E-15 113.6 9.7 128 259-406 197-334 (376)
31 2gek_A Phosphatidylinositol ma 99.1 4.3E-08 1.5E-12 95.2 28.2 124 262-406 209-349 (406)
32 2iw1_A Lipopolysaccharide core 99.1 4.1E-09 1.4E-13 101.2 20.5 165 259-444 194-371 (374)
33 2r60_A Glycosyl transferase, g 99.1 5.7E-08 1.9E-12 97.3 27.7 134 261-406 262-424 (499)
34 3dzc_A UDP-N-acetylglucosamine 99.1 2.5E-10 8.6E-15 110.9 9.2 135 258-414 228-372 (396)
35 3ot5_A UDP-N-acetylglucosamine 99.1 8.2E-10 2.8E-14 107.5 12.2 136 258-415 222-367 (403)
36 3beo_A UDP-N-acetylglucosamine 99.0 3.9E-09 1.3E-13 101.5 12.5 131 259-406 204-342 (375)
37 2iuy_A Avigt4, glycosyltransfe 98.9 5.8E-08 2E-12 92.1 19.5 125 263-405 164-307 (342)
38 3s28_A Sucrose synthase 1; gly 98.7 8.1E-07 2.8E-11 93.0 21.2 138 259-407 570-735 (816)
39 4hwg_A UDP-N-acetylglucosamine 98.7 4.6E-08 1.6E-12 94.3 10.3 129 259-407 202-343 (385)
40 2x6q_A Trehalose-synthase TRET 98.7 5.4E-07 1.8E-11 87.8 17.9 78 319-406 292-379 (416)
41 2f9f_A First mannosyl transfer 98.6 2.6E-07 9E-12 78.8 10.6 140 262-420 24-174 (177)
42 3oy2_A Glycosyltransferase B73 98.5 1.5E-05 5.1E-10 77.4 22.2 132 260-406 183-355 (413)
43 1rzu_A Glycogen synthase 1; gl 98.4 3.5E-06 1.2E-10 83.8 14.2 127 261-406 291-443 (485)
44 2hy7_A Glucuronosyltransferase 97.9 0.00032 1.1E-08 68.0 16.8 75 319-407 264-353 (406)
45 3qhp_A Type 1 capsular polysac 97.9 9E-05 3.1E-09 61.8 10.6 126 261-406 2-140 (166)
46 2xci_A KDO-transferase, 3-deox 97.9 0.0019 6.5E-08 61.7 20.9 98 321-424 261-364 (374)
47 2vsy_A XCC0866; transferase, g 97.8 0.00062 2.1E-08 68.9 18.2 82 320-406 434-522 (568)
48 2bfw_A GLGA glycogen synthase; 97.8 0.00029 9.9E-09 60.6 12.8 77 321-406 96-181 (200)
49 3q3e_A HMW1C-like glycosyltran 97.7 0.0003 1E-08 70.6 12.2 138 260-406 440-588 (631)
50 4gyw_A UDP-N-acetylglucosamine 97.7 0.0017 5.8E-08 67.6 18.3 137 257-406 519-668 (723)
51 3rhz_A GTF3, nucleotide sugar 97.4 0.00014 4.6E-09 68.6 5.5 111 321-444 215-337 (339)
52 2qzs_A Glycogen synthase; glyc 97.1 0.0026 9E-08 62.8 11.4 128 260-406 291-444 (485)
53 3tov_A Glycosyl transferase fa 96.2 0.088 3E-06 49.5 14.5 101 1-127 11-115 (349)
54 2x0d_A WSAF; GT4 family, trans 96.1 0.0014 4.7E-08 63.6 1.1 80 319-407 294-380 (413)
55 3vue_A GBSS-I, granule-bound s 95.5 0.053 1.8E-06 54.2 10.1 133 259-405 325-476 (536)
56 1psw_A ADP-heptose LPS heptosy 95.4 0.87 3E-05 42.3 17.8 101 1-127 3-106 (348)
57 1uqt_A Alpha, alpha-trehalose- 95.4 0.18 6.3E-06 49.5 13.3 106 322-444 333-451 (482)
58 3t5t_A Putative glycosyltransf 94.1 0.63 2.1E-05 45.7 13.1 108 321-444 353-470 (496)
59 3nb0_A Glycogen [starch] synth 86.7 2.4 8.1E-05 43.1 9.1 73 326-404 499-592 (725)
60 3dfz_A SIRC, precorrin-2 dehyd 75.4 13 0.00046 31.9 8.7 150 253-426 26-186 (223)
61 2iz6_A Molybdenum cofactor car 67.9 20 0.00068 29.5 7.7 131 250-406 37-174 (176)
62 2gt1_A Lipopolysaccharide hept 66.2 8.4 0.00029 35.1 5.8 131 259-406 177-322 (326)
63 2wqk_A 5'-nucleotidase SURE; S 65.7 6.1 0.00021 34.8 4.4 25 15-40 17-41 (251)
64 2phj_A 5'-nucleotidase SURE; S 63.7 23 0.00077 31.0 7.6 26 14-40 16-41 (251)
65 3vue_A GBSS-I, granule-bound s 61.8 3.9 0.00013 40.6 2.7 22 15-36 32-53 (536)
66 2lnd_A De novo designed protei 61.1 12 0.0004 25.9 4.2 48 357-405 50-100 (112)
67 2i2c_A Probable inorganic poly 60.9 4.8 0.00016 36.0 2.9 53 336-406 35-93 (272)
68 3bgw_A DNAB-like replicative h 59.4 14 0.00047 35.6 6.0 39 1-39 200-238 (444)
69 1g5t_A COB(I)alamin adenosyltr 57.0 46 0.0016 27.8 8.2 55 1-56 31-91 (196)
70 2x0d_A WSAF; GT4 family, trans 53.5 4.6 0.00016 38.5 1.6 27 10-36 63-89 (413)
71 1qkk_A DCTD, C4-dicarboxylate 51.4 30 0.001 26.9 6.1 64 357-425 74-137 (155)
72 2qzs_A Glycogen synthase; glyc 50.4 10 0.00035 36.6 3.6 26 10-35 18-43 (485)
73 3lqk_A Dipicolinate synthase s 48.8 68 0.0023 26.9 8.0 142 260-406 8-186 (201)
74 1o4v_A Phosphoribosylaminoimid 46.8 1.2E+02 0.0041 24.9 10.7 139 261-428 14-164 (183)
75 3l7i_A Teichoic acid biosynthe 46.7 7.7 0.00026 40.1 2.1 107 326-443 605-717 (729)
76 3la6_A Tyrosine-protein kinase 46.3 1.1E+02 0.0039 27.0 9.6 34 5-38 100-133 (286)
77 3bfv_A CAPA1, CAPB2, membrane 46.0 1.5E+02 0.005 26.0 10.2 33 6-38 91-123 (271)
78 1pjq_A CYSG, siroheme synthase 41.6 2.1E+02 0.0071 27.4 11.3 148 253-426 7-168 (457)
79 1kyq_A Met8P, siroheme biosynt 41.6 66 0.0023 28.5 7.1 154 253-427 8-211 (274)
80 3euw_A MYO-inositol dehydrogen 40.8 2E+02 0.0067 26.0 10.7 109 261-389 6-123 (344)
81 2jk1_A HUPR, hydrogenase trans 39.9 51 0.0017 24.9 5.6 63 358-424 72-134 (139)
82 1ccw_A Protein (glutamate muta 39.9 28 0.00096 27.1 4.0 34 1-34 6-39 (137)
83 3qxc_A Dethiobiotin synthetase 39.8 78 0.0027 27.4 7.2 27 7-33 31-57 (242)
84 2pju_A Propionate catabolism o 39.2 23 0.00077 30.5 3.5 29 336-367 63-91 (225)
85 2vqe_B 30S ribosomal protein S 38.4 1E+02 0.0035 26.9 7.6 32 101-132 158-191 (256)
86 1xmp_A PURE, phosphoribosylami 38.2 1.6E+02 0.0054 23.9 12.9 137 260-429 11-165 (170)
87 1y80_A Predicted cobalamin bin 38.2 24 0.00083 29.8 3.6 34 1-34 91-124 (210)
88 2i2x_B MTAC, methyltransferase 38.1 31 0.001 30.3 4.3 35 1-35 126-160 (258)
89 1q1v_A DEK protein; winged-hel 37.7 33 0.0011 23.3 3.4 52 390-443 11-64 (70)
90 3mc3_A DSRE/DSRF-like family p 37.5 30 0.001 26.8 3.8 33 3-35 21-55 (134)
91 3s2u_A UDP-N-acetylglucosamine 37.3 63 0.0022 29.8 6.7 26 336-363 92-120 (365)
92 3q2i_A Dehydrogenase; rossmann 37.1 1.8E+02 0.006 26.5 9.7 124 260-405 14-149 (354)
93 1o4v_A Phosphoribosylaminoimid 37.0 1.7E+02 0.0059 23.9 10.6 119 273-425 52-172 (183)
94 2q5c_A NTRC family transcripti 37.0 18 0.00061 30.4 2.5 31 335-368 50-80 (196)
95 2yxb_A Coenzyme B12-dependent 36.8 20 0.00068 29.0 2.7 34 1-34 21-54 (161)
96 3ci9_A Heat shock factor-bindi 35.8 16 0.00053 22.9 1.4 40 392-436 3-42 (48)
97 2an1_A Putative kinase; struct 35.5 17 0.00059 32.6 2.3 33 332-366 59-95 (292)
98 3qrx_B Melittin; calcium-bindi 35.2 12 0.00043 19.2 0.7 17 347-363 1-17 (26)
99 3ia7_A CALG4; glycosysltransfe 35.2 65 0.0022 29.7 6.5 27 336-364 102-130 (402)
100 3cio_A ETK, tyrosine-protein k 34.0 2.5E+02 0.0085 24.9 10.0 32 6-37 113-144 (299)
101 1u0t_A Inorganic polyphosphate 33.9 15 0.00052 33.3 1.7 56 333-406 72-131 (307)
102 1eiw_A Hypothetical protein MT 33.9 43 0.0015 25.1 3.9 65 334-405 36-109 (111)
103 1yt5_A Inorganic polyphosphate 32.7 14 0.00046 32.7 1.1 53 336-406 41-96 (258)
104 3l4e_A Uncharacterized peptida 32.5 1E+02 0.0035 25.9 6.6 45 251-295 19-63 (206)
105 2hy5_A Putative sulfurtransfer 32.2 46 0.0016 25.5 4.0 34 2-35 5-41 (130)
106 2gk4_A Conserved hypothetical 31.7 34 0.0012 29.5 3.4 22 15-36 32-53 (232)
107 2bon_A Lipid kinase; DAG kinas 31.4 1E+02 0.0034 28.1 6.9 67 276-366 44-118 (332)
108 3qjg_A Epidermin biosynthesis 31.3 38 0.0013 27.8 3.5 34 2-36 9-42 (175)
109 3kcn_A Adenylate cyclase homol 30.8 71 0.0024 24.5 5.1 48 357-406 75-123 (151)
110 2q5c_A NTRC family transcripti 30.6 62 0.0021 26.9 4.9 110 10-135 36-173 (196)
111 3s40_A Diacylglycerol kinase; 30.4 73 0.0025 28.5 5.7 29 336-366 63-97 (304)
112 2d1p_A TUSD, hypothetical UPF0 29.6 62 0.0021 25.3 4.4 34 2-35 17-53 (140)
113 2qs7_A Uncharacterized protein 29.2 50 0.0017 26.0 3.8 33 2-34 12-44 (144)
114 2w36_A Endonuclease V; hypoxan 29.2 81 0.0028 27.0 5.3 29 101-129 103-138 (225)
115 1rcu_A Conserved hypothetical 29.0 2.2E+02 0.0075 23.6 7.9 94 250-366 50-150 (195)
116 3qjg_A Epidermin biosynthesis 28.5 1.4E+02 0.0048 24.3 6.5 114 260-385 6-143 (175)
117 3u3x_A Oxidoreductase; structu 28.4 2.4E+02 0.0082 25.7 9.0 90 261-367 28-122 (361)
118 2qv7_A Diacylglycerol kinase D 28.1 68 0.0023 29.2 5.1 29 336-366 80-114 (337)
119 1ydh_A AT5G11950; structural g 28.1 1.4E+02 0.0049 25.2 6.7 135 250-402 33-186 (216)
120 3ezx_A MMCP 1, monomethylamine 27.7 47 0.0016 28.2 3.7 35 1-35 95-129 (215)
121 3e9m_A Oxidoreductase, GFO/IDH 27.3 3.4E+02 0.011 24.3 10.1 110 261-389 7-125 (330)
122 4b4o_A Epimerase family protei 27.1 36 0.0012 30.2 3.0 27 6-34 6-32 (298)
123 4b4k_A N5-carboxyaminoimidazol 26.7 2.6E+02 0.009 22.8 8.1 118 273-423 61-181 (181)
124 1kjn_A MTH0777; hypotethical p 26.6 44 0.0015 26.5 2.9 22 14-35 24-45 (157)
125 3to5_A CHEY homolog; alpha(5)b 26.6 1.2E+02 0.004 23.4 5.5 34 101-134 57-99 (134)
126 2r8r_A Sensor protein; KDPD, P 26.5 74 0.0025 27.3 4.6 36 1-36 9-44 (228)
127 3afo_A NADH kinase POS5; alpha 26.3 39 0.0013 31.7 3.1 61 328-406 106-171 (388)
128 3tl4_X Glutaminyl-tRNA synthet 26.3 31 0.0011 28.7 2.1 49 371-425 102-154 (187)
129 3lyu_A Putative hydrogenase; t 26.2 56 0.0019 25.5 3.6 23 11-34 29-51 (142)
130 3zqu_A Probable aromatic acid 26.1 58 0.002 27.5 3.9 33 2-35 8-40 (209)
131 1v5e_A Pyruvate oxidase; oxido 26.1 2E+02 0.0068 28.5 8.5 27 339-365 69-101 (590)
132 1pno_A NAD(P) transhydrogenase 25.8 70 0.0024 25.8 3.9 24 12-35 40-63 (180)
133 1jx7_A Hypothetical protein YC 25.8 53 0.0018 24.3 3.3 34 3-36 7-44 (117)
134 2rjn_A Response regulator rece 25.8 20 0.0007 27.9 0.9 62 358-424 79-141 (154)
135 3e18_A Oxidoreductase; dehydro 25.5 3.1E+02 0.011 24.9 9.3 83 261-363 7-94 (359)
136 3m2t_A Probable dehydrogenase; 25.4 1.6E+02 0.0055 26.9 7.3 85 261-363 7-97 (359)
137 1ybh_A Acetolactate synthase, 25.4 2E+02 0.007 28.4 8.5 28 336-365 75-108 (590)
138 2gkg_A Response regulator homo 25.3 71 0.0024 23.2 4.0 47 357-406 79-125 (127)
139 1p9o_A Phosphopantothenoylcyst 25.2 41 0.0014 30.5 2.9 22 15-36 68-89 (313)
140 1sbz_A Probable aromatic acid 25.2 62 0.0021 27.1 3.8 33 2-35 4-37 (197)
141 2ho3_A Oxidoreductase, GFO/IDH 25.1 3.6E+02 0.012 23.9 10.4 105 262-387 4-118 (325)
142 1d4o_A NADP(H) transhydrogenas 25.1 73 0.0025 25.8 3.9 24 12-35 39-62 (184)
143 1q6z_A BFD, BFDC, benzoylforma 25.0 1.3E+02 0.0043 29.4 6.7 75 278-364 5-95 (528)
144 3to5_A CHEY homolog; alpha(5)b 24.8 68 0.0023 24.7 3.8 47 357-405 86-132 (134)
145 2lpm_A Two-component response 24.5 66 0.0022 24.4 3.6 29 101-129 53-86 (123)
146 4hkt_A Inositol 2-dehydrogenas 23.8 3.9E+02 0.013 23.8 10.3 107 261-389 5-121 (331)
147 3goc_A Endonuclease V; alpha-b 23.3 1.3E+02 0.0044 25.9 5.4 29 101-129 107-142 (237)
148 2a33_A Hypothetical protein; s 23.1 2E+02 0.0068 24.3 6.7 93 261-366 45-147 (215)
149 2fsv_C NAD(P) transhydrogenase 22.9 83 0.0028 26.0 3.9 24 12-35 63-86 (203)
150 3db2_A Putative NADPH-dependen 22.9 1.7E+02 0.0059 26.5 6.9 109 261-389 7-124 (354)
151 1id1_A Putative potassium chan 22.6 47 0.0016 26.0 2.5 24 10-35 12-35 (153)
152 1djl_A Transhydrogenase DIII; 22.2 87 0.003 26.0 3.9 24 12-35 62-85 (207)
153 2ejb_A Probable aromatic acid 22.1 1E+02 0.0035 25.5 4.6 33 2-35 5-37 (189)
154 3otg_A CALG1; calicheamicin, T 21.8 1.3E+02 0.0045 27.7 6.0 30 336-367 130-160 (412)
155 3sbx_A Putative uncharacterize 21.8 2.3E+02 0.0077 23.4 6.6 100 250-366 36-146 (189)
156 3tsa_A SPNG, NDP-rhamnosyltran 21.7 1.7E+02 0.0058 26.7 6.7 30 336-367 114-144 (391)
157 2d1p_B TUSC, hypothetical UPF0 21.7 1.1E+02 0.0036 23.0 4.3 34 2-35 6-41 (119)
158 2glx_A 1,5-anhydro-D-fructose 21.5 4.3E+02 0.015 23.4 9.4 62 327-389 51-120 (332)
159 3pdi_B Nitrogenase MOFE cofact 21.5 97 0.0033 29.8 4.9 80 10-128 320-399 (458)
160 2ywr_A Phosphoribosylglycinami 21.5 1.8E+02 0.0063 24.4 6.2 31 101-131 80-111 (216)
161 3kkj_A Amine oxidase, flavin-c 21.5 51 0.0017 27.9 2.8 19 15-33 14-32 (336)
162 3lqk_A Dipicolinate synthase s 21.0 86 0.003 26.3 3.9 34 4-38 13-47 (201)
163 3vot_A L-amino acid ligase, BL 20.8 1.5E+02 0.0053 27.7 6.2 25 101-125 75-101 (425)
164 3ezy_A Dehydrogenase; structur 20.7 3.6E+02 0.012 24.2 8.6 109 262-389 5-122 (344)
165 1yio_A Response regulatory pro 20.7 2.5E+02 0.0084 22.7 7.0 48 357-406 75-122 (208)
166 3ox4_A Alcohol dehydrogenase 2 20.4 1.1E+02 0.0038 28.5 5.0 42 251-294 23-64 (383)
167 1o97_C Electron transferring f 20.2 1.4E+02 0.0049 26.1 5.4 31 101-131 112-148 (264)
168 2bru_C NAD(P) transhydrogenase 20.1 80 0.0027 25.6 3.2 24 12-35 47-70 (186)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=8.1e-70 Score=535.24 Aligned_cols=425 Identities=27% Similarity=0.494 Sum_probs=351.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCCCCCCCC-----CCCCCceEEEcCCCCCCCCCCC-Ch-hHHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNG--FSITVVHTHFNPPNP-----SNHPEFNFQSIPDGLTADDVST-GI-NILITN 71 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~G--h~Vt~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~ 71 (445)
|+++|+|++||++|++.||+.|+++| +.|||++++.+.... ...++++|+.+|++++++.... +. ..+.
T Consensus 16 vv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~~~~~~~-- 93 (454)
T 3hbf_A 16 VAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGNPREPIF-- 93 (454)
T ss_dssp EEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSCTTHHHH--
T ss_pred EEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCChHHHHH--
Confidence 58999999999999999999999999 999999986433221 1135799999999988876554 54 5555
Q ss_pred HHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhc-CC
Q 013342 72 LLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEE-GS 150 (445)
Q Consensus 72 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~-~~ 150 (445)
.+...+...+.+.++++.++.. . ++||||+|.+++|+..+|+++|||++.+++++++....+.+.+..... +.
T Consensus 94 ~~~~~~~~~~~~~l~~~~~~~~-----~-~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~ 167 (454)
T 3hbf_A 94 LFIKAMQENFKHVIDEAVAETG-----K-NITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGS 167 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-----C-CCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCH
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-----C-CCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCC
Confidence 5555666667777777655432 3 899999999999999999999999999999999999888775543322 11
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCCCCCccc-ccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceee
Q 013342 151 SPLQDPNKLQDPVPGLHPLRFKDLPTYRH-EIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPI 228 (445)
Q Consensus 151 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~v 228 (445)
..... ......+|+++.++..+++.+.. +......+++.+ ...+..++.+++||+++||++.++.+++.+ +++++|
T Consensus 168 ~~~~~-~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~v 245 (454)
T 3hbf_A 168 KEVHD-VKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KLLLNV 245 (454)
T ss_dssp HHHTT-SSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEEC
T ss_pred Ccccc-ccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEEE
Confidence 00011 12223478888888888887654 344445566656 677788999999999999999999998876 799999
Q ss_pred ccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccC
Q 013342 229 GPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGID 308 (445)
Q Consensus 229 Gp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~ 308 (445)
||++...+. ...+.++++.+||+.++++++|||||||+...+.+++.+++.+|++.+++|||+++.+. ..
T Consensus 246 GPl~~~~~~----~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~------~~ 315 (454)
T 3hbf_A 246 GPFNLTTPQ----RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP------KE 315 (454)
T ss_dssp CCHHHHSCC----SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH------HH
T ss_pred CCccccccc----ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc------hh
Confidence 999865432 11334556999999888899999999999998889999999999999999999996531 23
Q ss_pred CchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeC
Q 013342 309 LLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELE 388 (445)
Q Consensus 309 ~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 388 (445)
.+|+++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|+++||+.||+++++.||+|+.++
T Consensus 316 ~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~ 395 (454)
T 3hbf_A 316 KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD 395 (454)
T ss_dssp HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG
T ss_pred cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec
Confidence 47788888889999999999999999999988899999999999999999999999999999999999998459999998
Q ss_pred c-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHhC
Q 013342 389 N-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFIN 445 (445)
Q Consensus 389 ~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 445 (445)
. .+++++|+++|+++|+|++|++||+||++|++++++++.+||++.+++++|+++++
T Consensus 396 ~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 396 NGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp GGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 7 89999999999999998556699999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=4.5e-65 Score=511.29 Aligned_cols=431 Identities=32% Similarity=0.673 Sum_probs=336.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC---------CCCceEEEcCCCCCCCC---CCC-Ch-h
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSN---------HPEFNFQSIPDGLTADD---VST-GI-N 66 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~---~~~-~~-~ 66 (445)
|+++|+|++||++|++.||++|++|||+|||++++.+...... .++++|+.+++++++.. ... ++ .
T Consensus 11 vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~~~~~ 90 (482)
T 2pq6_A 11 VVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQDVPT 90 (482)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CCHHH
T ss_pred EEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcchhHHH
Confidence 5899999999999999999999999999999998644322111 14899999998776521 112 45 6
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHhh--ccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhh
Q 013342 67 ILITNLLNVNCQAPFFECMVRMMEQ--QQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLH 144 (445)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 144 (445)
++. .+...+...+.++++.+.+. . . +||+||+|.++.|+..+|+++|||++.++++++.....+.+.+.
T Consensus 91 ~~~--~~~~~~~~~l~~ll~~l~~~~~~------~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 161 (482)
T 2pq6_A 91 LCQ--SVRKNFLKPYCELLTRLNHSTNV------P-PVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRS 161 (482)
T ss_dssp HHH--HHTTSSHHHHHHHHHHHHTCSSS------C-CCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHH
T ss_pred HHH--HHHHHhhHHHHHHHHHHhhhccC------C-CceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHH
Confidence 555 55567888888888877532 2 2 89999999999999999999999999999999887776655555
Q ss_pred hhhcCCCCCCCC--------CCCCcCCCCCCCCCCCCCCCcccc--cchHHHHHHHH-hhhccCCcEEEEcchhhhcHHH
Q 013342 145 LEEEGSSPLQDP--------NKLQDPVPGLHPLRFKDLPTYRHE--IMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESS 213 (445)
Q Consensus 145 ~~~~~~~p~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~ 213 (445)
+...++.|.... ....+.+++++.++..+++.+... ......+.+.. .+...+++.+++||+++||++.
T Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 162 FVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp HHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred HHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 555666665321 112223455545555555544321 12333444444 5667789999999999999999
Q ss_pred HHHHHhccCCCceeeccCCCC-CCC-------CCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHH
Q 013342 214 LAQLQQQCQVPIFPIGPFHKF-APF-------STSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGL 285 (445)
Q Consensus 214 ~~~~~~~~~~~~~~vGp~~~~-~~~-------~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al 285 (445)
++.+++.+ +++++|||++.. +.. ......++.+.++.+||+.++++++|||||||+...+.+.+.+++++|
T Consensus 242 ~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 320 (482)
T 2pq6_A 242 INALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGL 320 (482)
T ss_dssp HHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHH
Confidence 88888877 889999999863 111 000112345567899999878899999999999888888899999999
Q ss_pred HhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCC
Q 013342 286 VNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRP 365 (445)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P 365 (445)
++.+++|||+++.+...+. ...+|+++.++.++|+++++|+||.++|.|+++++||||||+||++|++++|||||++|
T Consensus 321 ~~~~~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P 398 (482)
T 2pq6_A 321 ANCKKSFLWIIRPDLVIGG--SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWP 398 (482)
T ss_dssp HHTTCEEEEECCGGGSTTT--GGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HhcCCcEEEEEcCCccccc--cccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecC
Confidence 9999999999964321111 12378888888899999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHH-hhheeeeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 366 CFGDQRVNARYVS-HVWRTGLELENELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 366 ~~~DQ~~na~~v~-~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+++||+.||++++ + +|+|+.++.++++++|+++|+++|+|+++++||+||+++++++++++.+||++.+++++|++.+
T Consensus 399 ~~~dQ~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 477 (482)
T 2pq6_A 399 FFADQPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 477 (482)
T ss_dssp CSTTHHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 9999999999996 7 6999999767999999999999999944447999999999999999999999999999999986
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2.4e-61 Score=482.75 Aligned_cols=429 Identities=28% Similarity=0.468 Sum_probs=322.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCCC--CCCC----C-CCCceEEEcCCCCCCCCCCC-Ch-hHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN-GFSITVVHTHFNP--PNPS----N-HPEFNFQSIPDGLTADDVST-GI-NILIT 70 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~-Gh~Vt~~~~~~~~--~~~~----~-~~~~~~~~l~~~~~~~~~~~-~~-~~~~~ 70 (445)
|+++|+|++||++|+++||++|++| ||+|||+++..+. ..+. . ..+++|+.+++...+..... ++ ..+.
T Consensus 9 vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~- 87 (480)
T 2vch_A 9 VAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSSTRIESRIS- 87 (480)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTCCHHHHHH-
T ss_pred EEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCchhHHHHHH-
Confidence 5899999999999999999999998 9999999997642 2211 1 35899999996432211111 34 3333
Q ss_pred HHHHHhcchHHHHHHHHHHhhccCCCCCCCCc-eEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcC
Q 013342 71 NLLNVNCQAPFFECMVRMMEQQQQHPAGDDQI-ACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEG 149 (445)
Q Consensus 71 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~ 149 (445)
.....+...+.++++.+.+ .. ++ |+||+|.++.++..+|+++|||++.++++++.....+.+.+......
T Consensus 88 -~~~~~~~~~l~~ll~~~~~-~~-------~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (480)
T 2vch_A 88 -LTVTRSNPELRKVFDSFVE-GG-------RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETV 158 (480)
T ss_dssp -HHHHTTHHHHHHHHHHHHH-TT-------CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHC
T ss_pred -HHHHhhhHHHHHHHHHhcc-CC-------CCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcC
Confidence 3445666777777777642 22 78 99999999988999999999999999999988776665544332222
Q ss_pred CCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhcc--CCCce
Q 013342 150 SSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQC--QVPIF 226 (445)
Q Consensus 150 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~--~~~~~ 226 (445)
..+..+. .....+|+++.+....++.....+.....+.+.. ...+.+...+++|++.++|++....+++.. .++++
T Consensus 159 ~~~~~~~-~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~ 237 (480)
T 2vch_A 159 SCEFREL-TEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 237 (480)
T ss_dssp CSCGGGC-SSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEE
T ss_pred CCccccc-CCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEE
Confidence 1111100 0011244554444445554332222233444444 555667788999999999998877776421 26899
Q ss_pred eeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCC---
Q 013342 227 PIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNA--- 303 (445)
Q Consensus 227 ~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~--- 303 (445)
+|||++..... ....+.++++.+||+.++++++|||||||+...+.+++.+++++|++.+++|||+++.....+
T Consensus 238 ~vGpl~~~~~~---~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~ 314 (480)
T 2vch_A 238 PVGPLVNIGKQ---EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSS 314 (480)
T ss_dssp ECCCCCCCSCS---CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTT
T ss_pred EEecccccccc---ccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccccc
Confidence 99999865321 000223456899999877899999999999988889999999999999999999997643211
Q ss_pred -------CCccCCchHHHHHHhcCCcEEEE-eccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHH
Q 013342 304 -------PEGIDLLPEVLAEAVQENGCIVK-WAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNAR 375 (445)
Q Consensus 304 -------~~~~~~~~~~~~~~~~~n~~~~~-~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~ 375 (445)
.+..+.+|+++.++..++.+++. |+||.+||+|+++++||||||+||++|++++|||||++|+++||+.||+
T Consensus 315 ~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~ 394 (480)
T 2vch_A 315 YFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAV 394 (480)
T ss_dssp TTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred ccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHH
Confidence 01113478888888888888886 9999999999999999999999999999999999999999999999999
Q ss_pred HH-HhhheeeeEeCc----ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 376 YV-SHVWRTGLELEN----ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 376 ~v-~~~~G~g~~~~~----~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
++ ++ +|+|+.++. .+++++|+++|+++|+++++++||+||++|++++++++.+||++.+++++|++.+
T Consensus 395 ~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~ 467 (480)
T 2vch_A 395 LLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKW 467 (480)
T ss_dssp HHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred HHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 97 68 799999965 5899999999999998554589999999999999999999999999999999875
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.3e-61 Score=481.64 Aligned_cols=425 Identities=26% Similarity=0.497 Sum_probs=323.2
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCe--EEEEeCCCCCCC-----CC-CCCCceEEEcCCCCCCCCCCC-Ch-hHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFS--ITVVHTHFNPPN-----PS-NHPEFNFQSIPDGLTADDVST-GI-NILIT 70 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~--Vt~~~~~~~~~~-----~~-~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~ 70 (445)
|+++|+|++||++|+++||+.|++|||+ ||+++++.+... .. ...+++|+.+++++++..... .. ..+.
T Consensus 10 vv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~~~~~- 88 (456)
T 2c1x_A 10 VAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQEDIE- 88 (456)
T ss_dssp EEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTHHHH-
T ss_pred EEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChHHHHH-
Confidence 5899999999999999999999999766 477877432111 10 125899999998877654322 33 4444
Q ss_pred HHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhc-C
Q 013342 71 NLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEE-G 149 (445)
Q Consensus 71 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~-~ 149 (445)
.+...+...+.++++.+.++.. . +||+||+|.++.|+..+|+++|||++.++++++.....+.+.+..... +
T Consensus 89 -~~~~~~~~~~~~~l~~l~~~~~-----~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
T 2c1x_A 89 -LFTRAAPESFRQGMVMAVAETG-----R-PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIG 161 (456)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHT-----C-CCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHC
T ss_pred -HHHHHhHHHHHHHHHHHHhccC-----C-CceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccC
Confidence 4444445556666666554321 2 899999999999999999999999999999988776655443322111 2
Q ss_pred CCCC-CCCCCCCcCCCCCCCCCCCCCCCccc--ccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhccCCCc
Q 013342 150 SSPL-QDPNKLQDPVPGLHPLRFKDLPTYRH--EIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPI 225 (445)
Q Consensus 150 ~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~ 225 (445)
+.+. .........+|++..++..+++.... .......+.+.+ .....+++.+++|++++||++..+.+++.+ +++
T Consensus 162 ~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~-~~~ 240 (456)
T 2c1x_A 162 VSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL-KTY 240 (456)
T ss_dssp SSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-SCE
T ss_pred CcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-CCE
Confidence 2111 01011122356665556666654321 111122233333 345577899999999999999888888877 789
Q ss_pred eeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCC
Q 013342 226 FPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPE 305 (445)
Q Consensus 226 ~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~ 305 (445)
++|||++..... ..++.+.++.+|++.++++++|||||||+...+.+.+.+++++|++.++++||+++...
T Consensus 241 ~~vGpl~~~~~~----~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~----- 311 (456)
T 2c1x_A 241 LNIGPFNLITPP----PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA----- 311 (456)
T ss_dssp EECCCHHHHC-------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG-----
T ss_pred EEecCcccCccc----ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc-----
Confidence 999999865432 11334456899999878899999999999987888899999999999999999995431
Q ss_pred ccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeee
Q 013342 306 GIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGL 385 (445)
Q Consensus 306 ~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~ 385 (445)
...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|++.||+.||+++++.||+|+
T Consensus 312 -~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~ 390 (456)
T 2c1x_A 312 -RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGV 390 (456)
T ss_dssp -GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEE
T ss_pred -hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEE
Confidence 2346778877788999999999999999999988899999999999999999999999999999999999999449999
Q ss_pred EeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 386 ELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 386 ~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
.++. .+++++|+++|+++|+|++|++||+||+++++++++++.+||++.+++++|++.+
T Consensus 391 ~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~ 450 (456)
T 2c1x_A 391 RIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLV 450 (456)
T ss_dssp ECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred EecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHH
Confidence 9987 8999999999999999854559999999999999999999999999999999976
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.6e-59 Score=464.48 Aligned_cols=417 Identities=25% Similarity=0.422 Sum_probs=319.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC-----C----CCCCCceEEEcCCC-CCCCCCCC-Ch-h
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN--GFSITVVHTHFNPPN-----P----SNHPEFNFQSIPDG-LTADDVST-GI-N 66 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~-----~----~~~~~~~~~~l~~~-~~~~~~~~-~~-~ 66 (445)
|+++|+|++||++|++.||+.|+++ ||+|||++++.+... + ....+++|+.+|+. +++ .... +. .
T Consensus 12 vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~-~~~~~~~~~ 90 (463)
T 2acv_A 12 LIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPP-QELLKSPEF 90 (463)
T ss_dssp EEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCC-GGGGGSHHH
T ss_pred EEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCc-ccccCCccH
Confidence 5899999999999999999999999 999999999765321 0 12258999999975 332 1111 22 2
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhh
Q 013342 67 ILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLE 146 (445)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 146 (445)
.+. .....+...+.++++.+ .. . +||+||+|.++.|+..+|+++|||++.++++++.....+.+.+...
T Consensus 91 ~~~--~~~~~~~~~~~~ll~~~--~~------~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 91 YIL--TFLESLIPHVKATIKTI--LS------N-KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp HHH--HHHHHTHHHHHHHHHHH--CC------T-TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred HHH--HHHHhhhHHHHHHHHhc--cC------C-CCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 233 33456666777777765 11 2 8999999999889999999999999999999988777665544321
Q ss_pred hcCCCCCCCCCCC---CcCCCCC-CCCCCCCCCCcccccchHHHHHHHH-hhhccCCcEEEEcchhhhcHHHHHHHHhcc
Q 013342 147 EEGSSPLQDPNKL---QDPVPGL-HPLRFKDLPTYRHEIMEHYLQLITS-MYKIRTSSAVIWNTMHYLEESSLAQLQQQC 221 (445)
Q Consensus 147 ~~~~~p~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~n~~~~le~~~~~~~~~~~ 221 (445)
.. .+... ... ...+|++ ..+...+++.....+ ...++.+.. ...+..++.+++||+++||++....+++..
T Consensus 160 ~~--~~~~~-~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~ 235 (463)
T 2acv_A 160 IE--EVFDD-SDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD 235 (463)
T ss_dssp TT--CCCCC-SSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred cc--CCCCC-ccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence 00 11111 010 1234555 454555554332222 223344434 555677888999999999998888777655
Q ss_pred --CCCceeeccCCCCCC-CCCCCCCcCCCchhchhhccCCCCceEEEEecccc-cCChhhHHHHHHHHHhCCCCEEEEEC
Q 013342 222 --QVPIFPIGPFHKFAP-FSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVA-SMDKKEPEEMAWGLVNSKQPFLWVIR 297 (445)
Q Consensus 222 --~~~~~~vGp~~~~~~-~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~v~~~~ 297 (445)
++++++|||++.... .. ....++.+.++.+|++.++++++|||||||+. ..+.+++.+++++|++.+++|||+++
T Consensus 236 ~p~~~v~~vGpl~~~~~~~~-~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 314 (463)
T 2acv_A 236 EKIPPIYAVGPLLDLKGQPN-PKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNS 314 (463)
T ss_dssp TTSCCEEECCCCCCSSCCCB-TTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred ccCCcEEEeCCCcccccccc-cccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEC
Confidence 578999999986532 10 00001233568999998888999999999999 77778899999999999999999995
Q ss_pred CCCCCCCCccCCchHHHHHHh--cCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHH
Q 013342 298 PSSNNAPEGIDLLPEVLAEAV--QENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNAR 375 (445)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~ 375 (445)
.+ .+.+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|+++||+.||+
T Consensus 315 ~~-------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~ 387 (463)
T 2acv_A 315 AE-------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAF 387 (463)
T ss_dssp CC-------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHH
T ss_pred CC-------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHH
Confidence 42 123667777666 889999999999999999998899999999999999999999999999999999999
Q ss_pred HH-HhhheeeeEe-C----c--ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 376 YV-SHVWRTGLEL-E----N--ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 376 ~v-~~~~G~g~~~-~----~--~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
++ ++ +|+|+.+ + . .+++++|+++|+++|++. ++||+||+++++++++++.+||++.+++++|++++
T Consensus 388 ~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 461 (463)
T 2acv_A 388 RLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461 (463)
T ss_dssp HHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred HHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh
Confidence 95 88 7999999 3 3 589999999999999732 68999999999999999999999999999999986
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.7e-44 Score=354.91 Aligned_cols=386 Identities=14% Similarity=0.138 Sum_probs=259.5
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCC----C-Ch-hHHHHHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVS----T-GI-NILITNLLN 74 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~-~~-~~~~~~~~~ 74 (445)
|+|+++|+.||++|+++||++|+++||+|+|++++.....+ ...|++|+.++..++..... . +. ..+. .+.
T Consensus 15 Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 91 (424)
T 2iya_A 15 ISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQV-KAAGATPVVYDSILPKESNPEESWPEDQESAMG--LFL 91 (424)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HHHTCEEEECCCCSCCTTCTTCCCCSSHHHHHH--HHH
T ss_pred EEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHH-HhCCCEEEecCccccccccchhhcchhHHHHHH--HHH
Confidence 58899999999999999999999999999999986543322 33489999998765433211 1 33 3333 333
Q ss_pred HhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCC
Q 013342 75 VNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQ 154 (445)
Q Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (445)
......+.++ .++.+. . +||+||+|.+..++..+|+.+|||++.+++.+..........+.. ...+....
T Consensus 92 ~~~~~~~~~l-~~~l~~-------~-~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 161 (424)
T 2iya_A 92 DEAVRVLPQL-EDAYAD-------D-RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV-QDPTADRG 161 (424)
T ss_dssp HHHHHHHHHH-HHHTTT-------S-CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG-SCCCC---
T ss_pred HHHHHHHHHH-HHHHhc-------c-CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc-cccccccc
Confidence 3222222222 223222 2 899999999888899999999999999887664111000000000 00000000
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCc-ccccc-hHHHHHHHHh-------hhccCCcEEEEcchhhhcHHHHHHHHhccCCCc
Q 013342 155 DPNKLQDPVPGLHPLRFKDLPTY-RHEIM-EHYLQLITSM-------YKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPI 225 (445)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-------~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~ 225 (445)
. . ...+............. ..... +...+.+.+. ......+.++++++++|+++ ...+++++
T Consensus 162 ~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~~ 232 (424)
T 2iya_A 162 E---E-AAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GDTVGDNY 232 (424)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----GGGCCTTE
T ss_pred c---c-cccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----ccCCCCCE
Confidence 0 0 00000000000000000 00000 0011111110 11125678999999999975 24577889
Q ss_pred eeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCC
Q 013342 226 FPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPE 305 (445)
Q Consensus 226 ~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~ 305 (445)
++|||+..... +..+|++..+++++|||++||......+.+..+++++++.+.+++|+++.+..
T Consensus 233 ~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~---- 296 (424)
T 2iya_A 233 TFVGPTYGDRS------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVD---- 296 (424)
T ss_dssp EECCCCCCCCG------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSC----
T ss_pred EEeCCCCCCcc------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCC----
Confidence 99999763211 02357765567889999999998656678888999999888899888754310
Q ss_pred ccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeee
Q 013342 306 GIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGL 385 (445)
Q Consensus 306 ~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~ 385 (445)
...+ +..++|+.+++|+||.++|+++++ ||||||+||++|++++|+|+|++|...||+.||+++++ +|+|+
T Consensus 297 -~~~~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~ 367 (424)
T 2iya_A 297 -PADL-----GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLGR 367 (424)
T ss_dssp -GGGG-----CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEE
T ss_pred -hHHh-----ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CCCEE
Confidence 0111 114678899999999999999998 99999999999999999999999999999999999999 69999
Q ss_pred EeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 013342 386 ELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEF 440 (445)
Q Consensus 386 ~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 440 (445)
.++. ++++++|+++|+++|+| +.|+++++++++++++. ++..++++.+
T Consensus 368 ~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i 416 (424)
T 2iya_A 368 HIPRDQVTAEKLREAVLAVASD---PGVAERLAAVRQEIREA----GGARAAADIL 416 (424)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHTS----CHHHHHHHHH
T ss_pred EcCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhc----CcHHHHHHHH
Confidence 9987 78999999999999999 89999999999999875 5555555444
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.1e-43 Score=348.67 Aligned_cols=354 Identities=16% Similarity=0.174 Sum_probs=226.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCC-------C---CC--C-Ch--
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTAD-------D---VS--T-GI-- 65 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~---~~--~-~~-- 65 (445)
|||+++|+.||++|+++||++|++|||+|||++++..... ...++.+..+....... . .. . ..
T Consensus 25 IL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (400)
T 4amg_A 25 ALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAV--AEAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSEGLGE 102 (400)
T ss_dssp EEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHH--HTTTCEEEESSTTCCSHHHHSCCC------------CH
T ss_pred EEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhH--HhcCCeeEecCCchhHhhhccccccccccccchhhhhH
Confidence 6899999999999999999999999999999998643332 22478888876432110 0 00 0 11
Q ss_pred hHHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhh
Q 013342 66 NILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHL 145 (445)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 145 (445)
..+. ..+.......+.++++.+ +.. +||+||+|.+..++..+|+.+|||++.+...+..........
T Consensus 103 ~~~~-~~~~~~~~~~~~~l~~~~-~~~--------~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~--- 169 (400)
T 4amg_A 103 GFFA-EMFARVSAVAVDGALRTA-RSW--------RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL--- 169 (400)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHH-HHH--------CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH---
T ss_pred HHHH-HHHHHHHHHHHHHHHHHH-Hhc--------CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH---
Confidence 1111 012122222222233322 221 899999999999999999999999998765443211111000
Q ss_pred hhcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH--hhhccCCcEEEEcchhhhcHHHHHHHHhccCC
Q 013342 146 EEEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS--MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQV 223 (445)
Q Consensus 146 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~ 223 (445)
..+.....+.+ ..........+....+......+ .....+
T Consensus 170 -----------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 211 (400)
T 4amg_A 170 -----------------------------------IRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEALLP---EDRRSP 211 (400)
T ss_dssp -----------------------------------HHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHTSC---GGGCCT
T ss_pred -----------------------------------HHHHHHHHHHHhCCCcccccchhhcccCchhhccCc---ccccCC
Confidence 00000000111 01111122222222221111000 000011
Q ss_pred CceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCC--hhhHHHHHHHHHhCCCCEEEEECCCCC
Q 013342 224 PIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMD--KKEPEEMAWGLVNSKQPFLWVIRPSSN 301 (445)
Q Consensus 224 ~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~v~~~~~~~~ 301 (445)
....+.+.... ....+.+|++..+++++|||||||+.... .+.+..+++++++.+.+++|..+....
T Consensus 212 ~~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~ 280 (400)
T 4amg_A 212 GAWPMRYVPYN-----------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL 280 (400)
T ss_dssp TCEECCCCCCC-----------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC
T ss_pred cccCccccccc-----------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc
Confidence 22222222211 11224568887888999999999987633 467888999999999999999865421
Q ss_pred CCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhh
Q 013342 302 NAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVW 381 (445)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~ 381 (445)
.. ... .++|+++++|+||.++|+|+++ ||||||+||++|++++|||+|++|+++||+.||+++++ +
T Consensus 281 ~~---~~~--------~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~ 346 (400)
T 4amg_A 281 AL---LGE--------LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-L 346 (400)
T ss_dssp CC---CCC--------CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-H
T ss_pred cc---ccc--------CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-C
Confidence 11 111 4678899999999999999998 99999999999999999999999999999999999999 6
Q ss_pred eeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 382 RTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 382 G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
|+|+.++. +++++ +|+++|+| ++||+||+++++++++. .+..++++ .++.+
T Consensus 347 G~g~~l~~~~~~~~----al~~lL~d---~~~r~~a~~l~~~~~~~----~~~~~~a~-~le~l 398 (400)
T 4amg_A 347 GIGFDAEAGSLGAE----QCRRLLDD---AGLREAALRVRQEMSEM----PPPAETAA-XLVAL 398 (400)
T ss_dssp TSEEECCTTTCSHH----HHHHHHHC---HHHHHHHHHHHHHHHTS----CCHHHHHH-HHHHH
T ss_pred CCEEEcCCCCchHH----HHHHHHcC---HHHHHHHHHHHHHHHcC----CCHHHHHH-HHHHh
Confidence 99999987 66654 67789999 89999999999999976 56655554 44443
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.9e-42 Score=336.80 Aligned_cols=359 Identities=11% Similarity=0.032 Sum_probs=241.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCC-C-Ch-hHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVS-T-GI-NILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~-~~-~~~~~~~~~~~~ 77 (445)
|+|++.|+.||++|+++||++|+++||+|||++++.....+ ...|++|+.++....+.... . .. ..+. .+ +
T Consensus 3 Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v-~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~--~~---~ 76 (415)
T 1iir_A 3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERL-AEVGVPHVPVGPSARAPIQRAKPLTAEDVR--RF---T 76 (415)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HHTTCCEEECCC-------CCSCCCHHHHH--HH---H
T ss_pred EEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHH-HHcCCeeeeCCCCHHHHhhcccccchHHHH--HH---H
Confidence 57889999999999999999999999999999996532222 33589999998643211111 1 11 1111 11 2
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcC-CCCc--hHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCC
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDE-IFYF--PEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQ 154 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (445)
...+.+.++.+.+... +||+||+|. +..+ +..+|+.+|||++.+++.+.... ..+.|..
T Consensus 77 ~~~~~~~~~~l~~~~~-------~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-----------~~~~p~~ 138 (415)
T 1iir_A 77 TEAIATQFDEIPAAAE-------GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-----------SPYYPPP 138 (415)
T ss_dssp HHHHHHHHHHHHHHTT-------TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSCCC
T ss_pred HHHHHHHHHHHHHHhc-------CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-----------CcccCCc
Confidence 2223334555543222 899999997 5577 88999999999999887663321 1111211
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCcccc-c----chHHHHHHHH-h--h-------hccCCcEEEEcchhhhcH-HHHHHHH
Q 013342 155 DPNKLQDPVPGLHPLRFKDLPTYRHE-I----MEHYLQLITS-M--Y-------KIRTSSAVIWNTMHYLEE-SSLAQLQ 218 (445)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~-~--~-------~~~~~~~~l~n~~~~le~-~~~~~~~ 218 (445)
. ..+ .+++ ......+.....+ . .....+.... + . ..... .+++|++++|++ + +
T Consensus 139 ~-~~~--~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~ 207 (415)
T 1iir_A 139 P-LGE--PSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----P 207 (415)
T ss_dssp C--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----C
T ss_pred c-CCc--cccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----c
Confidence 1 000 0000 0000000000000 0 0000000000 0 0 01122 689999999986 3 2
Q ss_pred hccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECC
Q 013342 219 QQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRP 298 (445)
Q Consensus 219 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~ 298 (445)
..+ ++++|||+...+. ++.+.++.+|++. ++++||||+||+. ...+..+.+++++++.+.+++|+++.
T Consensus 208 ~~~--~~~~vG~~~~~~~-------~~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~ 275 (415)
T 1iir_A 208 TDL--DAVQTGAWILPDE-------RPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGW 275 (415)
T ss_dssp CSS--CCEECCCCCCCCC-------CCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTC
T ss_pred ccC--CeEeeCCCccCcc-------cCCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 222 7999999986532 2234568899984 3579999999987 56677888999999999999998754
Q ss_pred CCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHH
Q 013342 299 SSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVS 378 (445)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~ 378 (445)
+.. . . ...++|+.+++|+||.++|+++++ ||||||+||++|++++|+|+|++|...||..||++++
T Consensus 276 ~~~------~-~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 341 (415)
T 1iir_A 276 ADL------V-L-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVA 341 (415)
T ss_dssp TTC------C-C-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred Ccc------c-c-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHH
Confidence 311 0 1 113567889999999999999888 9999999999999999999999999999999999999
Q ss_pred hhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 013342 379 HVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 379 ~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~ 425 (445)
+ +|+|+.++. ++++++|+++|+++ +| +.|++++++++++++.
T Consensus 342 ~-~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 342 E-LGVGVAHDGPIPTFDSLSAALATA-LT---PETHARATAVAGTIRT 384 (415)
T ss_dssp H-HTSEEECSSSSCCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSCS
T ss_pred H-CCCcccCCcCCCCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHhh
Confidence 9 699999987 78999999999999 88 8999999999998865
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.7e-41 Score=332.49 Aligned_cols=365 Identities=11% Similarity=-0.006 Sum_probs=248.6
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCC--CC-Chh-HHHHHHHHHh
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDV--ST-GIN-ILITNLLNVN 76 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~-~~~-~~~~~~~~~~ 76 (445)
|+|++.++.||++|+++||++|+++||+|+|++++.....+ ...|+.|+.++........ .. ... .+. .+..
T Consensus 3 Il~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 78 (416)
T 1rrv_A 3 VLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERL-AEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQ--RLAA- 78 (416)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HHHTCCEEECSCCGGGCCCTTSCCCCHHHHH--HHHH-
T ss_pred EEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHH-HHcCCeeeecCCCHHHHHhhccccchhHHHH--HHHH-
Confidence 57889999999999999999999999999999986432222 3358999999854221111 11 111 122 1211
Q ss_pred cchHHHHHHHHHHhhccCCCCCCCCceEEEEcCC-CCc--hHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCC
Q 013342 77 CQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEI-FYF--PEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPL 153 (445)
Q Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~-~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 153 (445)
..+.++++.+.+.. . +||+||+|.+ .++ +..+|+.+|||++.+++.+.... ..+.|
T Consensus 79 --~~~~~~~~~l~~~~------~-~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~-----------~~~~p- 137 (416)
T 1rrv_A 79 --MTVEMQFDAVPGAA------E-GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA-----------SPHLP- 137 (416)
T ss_dssp --HHHHHHHHHHHHHT------T-TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSC-
T ss_pred --HHHHHHHHHHHHHh------c-CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC-----------CcccC-
Confidence 12233444444322 2 8999999974 466 78899999999999877653211 11111
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCC-cccccch--------HHH-HHHHHh---------hhccCCcEEEEcchhhhcHHHH
Q 013342 154 QDPNKLQDPVPGLHPLRFKDLPT-YRHEIME--------HYL-QLITSM---------YKIRTSSAVIWNTMHYLEESSL 214 (445)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~-~~~~~~---------~~~~~~~~~l~n~~~~le~~~~ 214 (445)
.. .. ++ .....+.. ......+ ... .....+ +..... .+++|++++|+++
T Consensus 138 ~~-~~----~~----~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-- 205 (416)
T 1rrv_A 138 PA-YD----EP----TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-- 205 (416)
T ss_dssp CC-BC----SC----CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC--
T ss_pred CC-CC----CC----CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC--
Confidence 00 00 00 00000000 0000000 000 010000 111223 6899999999864
Q ss_pred HHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEeccccc-CChhhHHHHHHHHHhCCCCEE
Q 013342 215 AQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVAS-MDKKEPEEMAWGLVNSKQPFL 293 (445)
Q Consensus 215 ~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~v 293 (445)
++.+ ++++|||+...+. ++.+.++.+|++. ++++|||++||... ...+.+..+++++++.+.+++
T Consensus 206 ---~~~~--~~~~vG~~~~~~~-------~~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v 271 (416)
T 1rrv_A 206 ---QPDV--DAVQTGAWLLSDE-------RPLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVI 271 (416)
T ss_dssp ---CSSC--CCEECCCCCCCCC-------CCCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred ---CCCC--CeeeECCCccCcc-------CCCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEE
Confidence 1212 7899999986532 2234568899984 35799999999864 345667889999999999999
Q ss_pred EEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhh
Q 013342 294 WVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVN 373 (445)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~n 373 (445)
|+++.+.. . . ...++|+.+++|+||.++|+++++ ||||||+||++|++++|+|+|++|...||+.|
T Consensus 272 ~~~g~~~~------~-~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 337 (416)
T 1rrv_A 272 LSRGWTEL------V-L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYF 337 (416)
T ss_dssp EECTTTTC------C-C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHH
T ss_pred EEeCCccc------c-c-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHH
Confidence 99864411 0 1 113568899999999999999998 99999999999999999999999999999999
Q ss_pred HHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 013342 374 ARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEF 440 (445)
Q Consensus 374 a~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 440 (445)
|+++++ +|+|+.++. ++++++|+++|+++ +| ++|+++++++++++++. ++. ++++.+
T Consensus 338 a~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~~~----~~~-~~~~~i 395 (416)
T 1rrv_A 338 AGRVAA-LGIGVAHDGPTPTFESLSAALTTV-LA---PETRARAEAVAGMVLTD----GAA-AAADLV 395 (416)
T ss_dssp HHHHHH-HTSEEECSSSCCCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCCCC----HHH-HHHHHH
T ss_pred HHHHHH-CCCccCCCCCCCCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHhhc----CcH-HHHHHH
Confidence 999999 599999986 78999999999999 88 89999999999888753 444 554444
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=6e-40 Score=323.76 Aligned_cols=371 Identities=15% Similarity=0.140 Sum_probs=254.9
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCC----CC-Ch-hHHHHHH-H
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDV----ST-GI-NILITNL-L 73 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~-~~-~~~~~~~-~ 73 (445)
|+|+++++.||++|+++||++|+++||+|+|++++...+.. ...|+.+..++...+.... .. +. ..+. . +
T Consensus 23 Il~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 99 (415)
T 3rsc_A 23 LLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPV-RAAGATVVPYQSEIIDADAAEVFGSDDLGVRPH--LMY 99 (415)
T ss_dssp EEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHH-HHTTCEEEECCCSTTTCCHHHHHHSSSSCHHHH--HHH
T ss_pred EEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHH-HhcCCEEEeccccccccccchhhccccHHHHHH--HHH
Confidence 58999999999999999999999999999999975433333 3358999999865443211 00 12 2222 2 2
Q ss_pred HHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEc-CCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCC
Q 013342 74 NVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYD-EIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSP 152 (445)
Q Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 152 (445)
.......+.++.+.+ +. ++||+||+| ...+++..+|+.+|||++.+.+....... +...+....... .
T Consensus 100 ~~~~~~~~~~l~~~l-~~--------~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~~~-~ 168 (415)
T 3rsc_A 100 LRENVSVLRATAEAL-DG--------DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQDMVTLAG-T 168 (415)
T ss_dssp HHHHHHHHHHHHHHH-SS--------SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHHHHHHHT-C
T ss_pred HHHHHHHHHHHHHHH-hc--------cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccccccccc-c
Confidence 222222222233332 22 289999999 66788889999999999997754321000 000000000000 0
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHh-------hhccC-CcEEEEcchhhhcHHHHHHHHhccCCC
Q 013342 153 LQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSM-------YKIRT-SSAVIWNTMHYLEESSLAQLQQQCQVP 224 (445)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~l~n~~~~le~~~~~~~~~~~~~~ 224 (445)
..+...........+..... ..... .+..+....+.++++ +..++.+
T Consensus 169 --------------------~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~ 223 (415)
T 3rsc_A 169 --------------------IDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----GDTFDDR 223 (415)
T ss_dssp --------------------CCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----GGGCCTT
T ss_pred --------------------CChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----cccCCCc
Confidence 00000000000111111110 11122 277888888877764 4556778
Q ss_pred ceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCC
Q 013342 225 IFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAP 304 (445)
Q Consensus 225 ~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~ 304 (445)
+.++||+...... ..+|....+++++||+++||......+.+..+++++++.+.+++|.++.+..
T Consensus 224 ~~~vGp~~~~~~~------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~--- 288 (415)
T 3rsc_A 224 FVFVGPCFDDRRF------------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVD--- 288 (415)
T ss_dssp EEECCCCCCCCGG------------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSC---
T ss_pred eEEeCCCCCCccc------------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCC---
Confidence 9999998743221 2346554567889999999997766677888999999999888888754310
Q ss_pred CccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheee
Q 013342 305 EGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTG 384 (445)
Q Consensus 305 ~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g 384 (445)
.+.+ +..++|+.+.+|+|+.++|+++++ +|||||+||++|++++|+|+|++|...||+.||+++++ .|+|
T Consensus 289 ------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~g~g 358 (415)
T 3rsc_A 289 ------PAAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-LGLG 358 (415)
T ss_dssp ------GGGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-HTCE
T ss_pred ------hHHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-cCCE
Confidence 0111 124678899999999999999999 99999999999999999999999999999999999999 5999
Q ss_pred eEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 013342 385 LELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLE 442 (445)
Q Consensus 385 ~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 442 (445)
+.+.. +++++.|.++|.++|+| ++++++++++++++.+. ++.+++++.+.+
T Consensus 359 ~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ 410 (415)
T 3rsc_A 359 AVLPGEKADGDTLLAAVGAVAAD---PALLARVEAMRGHVRRA----GGAARAADAVEA 410 (415)
T ss_dssp EECCGGGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHS----CHHHHHHHHHHH
T ss_pred EEcccCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhc----CHHHHHHHHHHH
Confidence 99987 88999999999999999 89999999999999885 566666555443
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=8.6e-40 Score=321.25 Aligned_cols=349 Identities=11% Similarity=0.068 Sum_probs=237.5
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCC-C-Ch-hHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVS-T-GI-NILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~-~~-~~~~~~~~~~~~ 77 (445)
|+|++.++.||++|+++||++|+++||+|+|++++...+.+ ...|+.|..++......... . .. .+.. .+....
T Consensus 3 Ili~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v-~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 79 (404)
T 3h4t_A 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERC-AEVGVPMVPVGRAVRAGAREPGELPPGAAE--VVTEVV 79 (404)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHH-HHTTCCEEECSSCSSGGGSCTTCCCTTCGG--GHHHHH
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHH-HHcCCceeecCCCHHHHhccccCCHHHHHH--HHHHHH
Confidence 57899999999999999999999999999999985422222 34589999998543211100 0 11 2212 222222
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCch---HHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCC
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFP---EAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQ 154 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (445)
.. .++.+.+... +||+||+|..+..+ ..+|+.+|||++.+..++......+...
T Consensus 80 ~~----~~~~l~~~~~-------~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~------------ 136 (404)
T 3h4t_A 80 AE----WFDKVPAAIE-------GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQA------------ 136 (404)
T ss_dssp HH----HHHHHHHHHT-------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHH------------
T ss_pred HH----HHHHHHHHhc-------CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHH------------
Confidence 22 2223222222 89999998665444 6899999999999877764211000000
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCcccccchHHHH-HHHHh--h------hccCCcEEEEcchhhhcHHHHHHHHhccCCCc
Q 013342 155 DPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQ-LITSM--Y------KIRTSSAVIWNTMHYLEESSLAQLQQQCQVPI 225 (445)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~------~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~ 225 (445)
...... ...........+ ..... . .....+..+++..+.+.+. +.+++++
T Consensus 137 -------------~~~~~~--~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~------~~~~~~~ 195 (404)
T 3h4t_A 137 -------------ERDMYN--QGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL------RPTDLGT 195 (404)
T ss_dssp -------------HHHHHH--HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC------CTTCCSC
T ss_pred -------------HHHHHH--HHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC------CCCCCCe
Confidence 000000 000000000000 00000 0 0001233455666666543 2245678
Q ss_pred eeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCC
Q 013342 226 FPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPE 305 (445)
Q Consensus 226 ~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~ 305 (445)
+++|++..+... +.++++.+|++ +++++|||++||+.. ..+.+..+++++++.+.++||+++....
T Consensus 196 ~~~G~~~~~~~~-------~~~~~l~~~l~--~~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~---- 261 (404)
T 3h4t_A 196 VQTGAWILPDQR-------PLSAELEGFLR--AGSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGL---- 261 (404)
T ss_dssp CBCCCCCCCCCC-------CCCHHHHHHHH--TSSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTC----
T ss_pred EEeCccccCCCC-------CCCHHHHHHHh--cCCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCccc----
Confidence 999988754322 23345788987 456899999999987 6778889999999999999999854311
Q ss_pred ccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeee
Q 013342 306 GIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGL 385 (445)
Q Consensus 306 ~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~ 385 (445)
..+ . .++|+.+++|+||.++|+++++ +|||||+||++|++++|+|+|++|+.+||+.||+++++ .|+|+
T Consensus 262 --~~~-~-----~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~ 330 (404)
T 3h4t_A 262 --GRI-D-----EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGV 330 (404)
T ss_dssp --CCS-S-----CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEE
T ss_pred --ccc-c-----CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEe
Confidence 111 1 3578899999999999999999 99999999999999999999999999999999999999 59999
Q ss_pred EeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 013342 386 ELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 386 ~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~ 425 (445)
.++. +++++.|.++|+++++ ++|+++++++++.+++
T Consensus 331 ~l~~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 331 AHDGPTPTVESLSAALATALT----PGIRARAAAVAGTIRT 367 (404)
T ss_dssp ECSSSSCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCCC
T ss_pred ccCcCCCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHhh
Confidence 9987 8899999999999996 4799999999987764
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=5.2e-39 Score=315.52 Aligned_cols=370 Identities=18% Similarity=0.190 Sum_probs=251.1
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCC----CC-Ch-hHHHHHH-H
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDV----ST-GI-NILITNL-L 73 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~-~~-~~~~~~~-~ 73 (445)
|+|+++++.||++|++.||++|+++||+|+|++++...+.. ...|+.++.++...+.... .. +. ..+. . +
T Consensus 7 il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 83 (402)
T 3ia7_A 7 ILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEV-KAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLH--LVY 83 (402)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH-HHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHH--HHH
T ss_pred EEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHH-HHcCCEEEecccccccccccccccccchHHHHH--HHH
Confidence 58899999999999999999999999999999985332222 3358999999854332111 11 22 3222 2 3
Q ss_pred HHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEc-CCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCC
Q 013342 74 NVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYD-EIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSP 152 (445)
Q Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 152 (445)
.......+.++.+.+ +. ++||+||+| ....++..+|+.+|||++.+.+.......... .+....... .
T Consensus 84 ~~~~~~~~~~l~~~l-~~--------~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~~-~ 152 (402)
T 3ia7_A 84 VRENVAILRAAEEAL-GD--------NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKSNG-Q 152 (402)
T ss_dssp HHHHHHHHHHHHHHH-TT--------CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHHHT-C
T ss_pred HHHHHHHHHHHHHHH-hc--------cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-ccccccccc-c
Confidence 333323333333333 22 299999999 66688889999999999997654321100000 000000000 0
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHh-------hhccCC-cEEEEcchhhhcHHHHHHHHhccCCC
Q 013342 153 LQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSM-------YKIRTS-SAVIWNTMHYLEESSLAQLQQQCQVP 224 (445)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~l~n~~~~le~~~~~~~~~~~~~~ 224 (445)
.. +...........+..... ...... +..+....++++++ +..++.+
T Consensus 153 -~~-------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~ 207 (402)
T 3ia7_A 153 -RH-------------------PADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AETFDER 207 (402)
T ss_dssp -CC-------------------GGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GGGCCTT
T ss_pred -cC-------------------hhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cccCCCC
Confidence 00 000000000000111000 111222 66777777777754 4446678
Q ss_pred ceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCC
Q 013342 225 IFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAP 304 (445)
Q Consensus 225 ~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~ 304 (445)
+.++||+...... ..+|+...+++++||+++||......+.+..+++++++.+.+++|.++.+..
T Consensus 208 ~~~vGp~~~~~~~------------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--- 272 (402)
T 3ia7_A 208 FAFVGPTLTGRDG------------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLD--- 272 (402)
T ss_dssp EEECCCCCCC----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSC---
T ss_pred eEEeCCCCCCccc------------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCC---
Confidence 9999998744221 2336554567889999999998766678889999999988888888754310
Q ss_pred CccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCc-ccchhhhHHHHHhhhee
Q 013342 305 EGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC-FGDQRVNARYVSHVWRT 383 (445)
Q Consensus 305 ~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~-~~DQ~~na~~v~~~~G~ 383 (445)
.+.+ +..++|+.+.+|+|+.++|+++++ +|||||+||++|++++|+|+|++|. ..||..||+++++ .|+
T Consensus 273 ------~~~~-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~ 342 (402)
T 3ia7_A 273 ------PAVL-GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGL 342 (402)
T ss_dssp ------GGGG-CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTS
T ss_pred ------hhhh-CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCC
Confidence 1111 114678899999999999999999 9999999999999999999999999 9999999999999 599
Q ss_pred eeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 013342 384 GLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 384 g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 441 (445)
|+.+.. +++++.|.++|.++|+| +.++++++++++++.+. ++.+++++.+.
T Consensus 343 g~~~~~~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~ 394 (402)
T 3ia7_A 343 GSVLRPDQLEPASIREAVERLAAD---SAVRERVRRMQRDILSS----GGPARAADEVE 394 (402)
T ss_dssp EEECCGGGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHTS----CHHHHHHHHHH
T ss_pred EEEccCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHhhC----ChHHHHHHHHH
Confidence 999987 88999999999999999 89999999999998875 55555555443
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.3e-37 Score=301.06 Aligned_cols=347 Identities=14% Similarity=0.114 Sum_probs=241.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCC------------CCCCCC-Ch-h
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLT------------ADDVST-GI-N 66 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~~-~~-~ 66 (445)
|++++.++.||++|+++|+++|+++||+|++++++...... ...|+.++.++.... ...... +. .
T Consensus 3 Il~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (384)
T 2p6p_A 3 ILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVV-TGVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVAQA 81 (384)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHHHH
T ss_pred EEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHH-HhCCCEEEEeCCcchHHHHhhhcccCccccCcchHHHH
Confidence 57889999999999999999999999999999985422211 235788888875320 000011 11 1
Q ss_pred HH-HHHH-HHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhh
Q 013342 67 IL-ITNL-LNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLH 144 (445)
Q Consensus 67 ~~-~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 144 (445)
.+ . . +...+...+.++.+.+.+ . +||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 82 ~~~~--~~~~~~~~~~~~~l~~~l~~-~--------~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~---------- 140 (384)
T 2p6p_A 82 RFTG--RWFARMAASSLPRMLDFSRA-W--------RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD---------- 140 (384)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHHHH-H--------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC----------
T ss_pred HHHH--HHHHhhHHHHHHHHHHHHhc-c--------CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc----------
Confidence 11 1 1 111222223333333322 1 8999999988788889999999999986532210
Q ss_pred hhhcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHH-HHHHHH--hhhccCCcEEEEcchhhhcHHHHHHHHhcc
Q 013342 145 LEEEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHY-LQLITS--MYKIRTSSAVIWNTMHYLEESSLAQLQQQC 221 (445)
Q Consensus 145 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~l~n~~~~le~~~~~~~~~~~ 221 (445)
+ .. + ....... .+.... .......+.++.++.+.++++ ++ +
T Consensus 141 -------~----~~-------~------------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~~-~ 184 (384)
T 2p6p_A 141 -------A----DG-------I------------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPA-----NA-A 184 (384)
T ss_dssp -------C----TT-------T------------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-----TS-C
T ss_pred -------c----ch-------h------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-----CC-C
Confidence 0 00 0 0000000 011111 111122578899999888754 11 2
Q ss_pred C-CCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccC-----ChhhHHHHHHHHHhCCCCEEEE
Q 013342 222 Q-VPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASM-----DKKEPEEMAWGLVNSKQPFLWV 295 (445)
Q Consensus 222 ~-~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~v~~ 295 (445)
+ .++.+++. . . +.++.+|++..+++++||+++||.... ..+.+..+++++++.+.+++|+
T Consensus 185 ~~~~~~~~~~-~----~---------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 250 (384)
T 2p6p_A 185 PARMMRHVAT-S----R---------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVA 250 (384)
T ss_dssp CCEECCCCCC-C----C---------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEE
T ss_pred CCCceEecCC-C----C---------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEE
Confidence 2 22344421 1 0 112567887546678999999999864 4578889999999999999998
Q ss_pred ECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHH
Q 013342 296 IRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNAR 375 (445)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~ 375 (445)
++.. ..+.+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||+
T Consensus 251 ~g~~----------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~ 316 (384)
T 2p6p_A 251 APDT----------VAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPAR 316 (384)
T ss_dssp CCHH----------HHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHH
T ss_pred eCCC----------CHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHH
Confidence 7311 11222 235789999 99999999999998 9999999999999999999999999999999999
Q ss_pred HHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 013342 376 YVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 376 ~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 441 (445)
++++ .|+|+.++. ++++++|.++|+++|+| +.|+++++++++++++. ++.+++++.+.
T Consensus 317 ~~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~ 375 (384)
T 2p6p_A 317 RVAD-YGAAIALLPGEDSTEAIADSCQELQAK---DTYARRAQDLSREISGM----PLPATVVTALE 375 (384)
T ss_dssp HHHH-HTSEEECCTTCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHTS----CCHHHHHHHHH
T ss_pred HHHH-CCCeEecCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhC----CCHHHHHHHHH
Confidence 9999 599999987 78999999999999999 89999999999999986 66666665543
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1e-37 Score=310.11 Aligned_cols=367 Identities=13% Similarity=0.123 Sum_probs=235.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCC-----C-----------CC---
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTA-----D-----------DV--- 61 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~-----------~~--- 61 (445)
|+|++.++.||++|+++||++|+++||+|+|++++.....+ ...|+.|+.++..... . ..
T Consensus 23 Il~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v-~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (441)
T 2yjn_A 23 VVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDI-TAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSLDFSE 101 (441)
T ss_dssp EEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHH-HTTTCCEEECSCCCCHHHHHHHTTHHHHHHHTTCCCTT
T ss_pred EEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHH-HhCCCceeecCCccchHHHhhhhhcccccccccccccc
Confidence 57889999999999999999999999999999985432222 3468999999864210 0 00
Q ss_pred --CC--ChhHHH-H-HHHHHhcc-----h-HHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEc
Q 013342 62 --ST--GINILI-T-NLLNVNCQ-----A-PFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILR 129 (445)
Q Consensus 62 --~~--~~~~~~-~-~~~~~~~~-----~-~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~ 129 (445)
.. .++.+. . ..+...+. . .+.++++.+.+ . +||+||+|....++..+|+.+|||++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~--------~pDlVv~d~~~~~~~~aA~~lgiP~v~~~ 172 (441)
T 2yjn_A 102 RDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-W--------RPDLVIWEPLTFAAPIAAAVTGTPHARLL 172 (441)
T ss_dssp CCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-H--------CCSEEEECTTCTHHHHHHHHHTCCEEEEC
T ss_pred cCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-c--------CCCEEEecCcchhHHHHHHHcCCCEEEEe
Confidence 10 111111 0 01211111 2 34444443322 1 89999999877888999999999999986
Q ss_pred cchHHHHHHHHhhhhhhhcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhh------ccCCcEEEE
Q 013342 130 TTSAATQISRLALLHLEEEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYK------IRTSSAVIW 203 (445)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~ 203 (445)
..+.......... .....+.+... . .....+........... ....+.++.
T Consensus 173 ~~~~~~~~~~~~~--~~~~~~~~~~~----------~-----------~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 229 (441)
T 2yjn_A 173 WGPDITTRARQNF--LGLLPDQPEEH----------R-----------EDPLAEWLTWTLEKYGGPAFDEEVVVGQWTID 229 (441)
T ss_dssp SSCCHHHHHHHHH--HHHGGGSCTTT----------C-----------CCHHHHHHHHHHHHTTCCCCCGGGTSCSSEEE
T ss_pred cCCCcchhhhhhh--hhhcccccccc----------c-----------cchHHHHHHHHHHHcCCCCCCccccCCCeEEE
Confidence 6543321111000 00011111000 0 00011111111111111 012344565
Q ss_pred cchhhhcHHHHHHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccC---ChhhHHH
Q 013342 204 NTMHYLEESSLAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASM---DKKEPEE 280 (445)
Q Consensus 204 n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~---~~~~~~~ 280 (445)
+..+.++++ ..++. ..+++.... ...++.+|++..+++++|||++||+... ..+.+..
T Consensus 230 ~~~~~~~~~------~~~~~--~~~~~~~~~-----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~ 290 (441)
T 2yjn_A 230 PAPAAIRLD------TGLKT--VGMRYVDYN-----------GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEE 290 (441)
T ss_dssp CSCGGGSCC------CCCCE--EECCCCCCC-----------SSCCCCGGGSSCCSSCEEEEEC----------CCSTTT
T ss_pred ecCccccCC------CCCCC--CceeeeCCC-----------CCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHH
Confidence 555555432 01110 112221100 1122567987656778999999999763 3466778
Q ss_pred HHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCC
Q 013342 281 MAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVP 360 (445)
Q Consensus 281 ~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP 360 (445)
+++++++.+.++||+++... ...+. ..++|+.+++|+||.++|+.+++ ||||||+||++|++++|+|
T Consensus 291 ~~~al~~~~~~~v~~~g~~~------~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P 357 (441)
T 2yjn_A 291 LLGAVGDVDAEIIATFDAQQ------LEGVA-----NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVP 357 (441)
T ss_dssp THHHHHTSSSEEEECCCTTT------TSSCS-----SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEEEECCcc------hhhhc-----cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCC
Confidence 89999999999999875331 11121 13578899999999999999999 9999999999999999999
Q ss_pred cccCCcccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 013342 361 MICRPCFGDQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNE 439 (445)
Q Consensus 361 ~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 439 (445)
+|++|...||+.||+++++ .|+|+.++. +++++.|.++|.++|+| +.|+++++++++++.+. ++..++++.
T Consensus 358 ~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~ 429 (441)
T 2yjn_A 358 QVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD---PAHRAGAARMRDDMLAE----PSPAEVVGI 429 (441)
T ss_dssp EEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHTS----CCHHHHHHH
T ss_pred EEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHcC----CCHHHHHHH
Confidence 9999999999999999999 599999987 78999999999999999 89999999999998875 555555444
Q ss_pred H
Q 013342 440 F 440 (445)
Q Consensus 440 ~ 440 (445)
+
T Consensus 430 i 430 (441)
T 2yjn_A 430 C 430 (441)
T ss_dssp H
T ss_pred H
Confidence 4
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.2e-37 Score=306.88 Aligned_cols=370 Identities=15% Similarity=0.135 Sum_probs=247.9
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCC----C-Ch-hHHHHHHHH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVS----T-GI-NILITNLLN 74 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~-~~-~~~~~~~~~ 74 (445)
|+|++.++.||++|++.|+++|+++||+|+++++....... ...|+.++.++...+..... . ++ ..+. .+.
T Consensus 10 Il~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 86 (430)
T 2iyf_A 10 IAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKV-AATGPRPVLYHSTLPGPDADPEAWGSTLLDNVE--PFL 86 (430)
T ss_dssp EEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHH-HTTSCEEEECCCCSCCTTSCGGGGCSSHHHHHH--HHH
T ss_pred EEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHH-HhCCCEEEEcCCcCccccccccccchhhHHHHH--HHH
Confidence 57889999999999999999999999999999986542222 33589999998654322111 1 33 3333 222
Q ss_pred HhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCC
Q 013342 75 VNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQ 154 (445)
Q Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (445)
..+...+..+.+.+ +. ++||+||+|.+..++..+|+.+|||++.+++................ +
T Consensus 87 ~~~~~~~~~l~~~l-~~--------~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~---~---- 150 (430)
T 2iyf_A 87 NDAIQALPQLADAY-AD--------DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPM---W---- 150 (430)
T ss_dssp HHHHHHHHHHHHHH-TT--------SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHH---H----
T ss_pred HHHHHHHHHHHHHh-hc--------cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccch---h----
Confidence 22222233333332 22 28999999987778889999999999998765421000000000000 0
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHh-------hhccCCcEEEEcchhhhcHHHHHHHHhccCCC-ce
Q 013342 155 DPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSM-------YKIRTSSAVIWNTMHYLEESSLAQLQQQCQVP-IF 226 (445)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~-~~ 226 (445)
..+.+. +... .......+.+.+. ......+.+++++.+.++++ ...++++ ++
T Consensus 151 ------~~~~~~--------~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~v~ 210 (430)
T 2iyf_A 151 ------REPRQT--------ERGR-AYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-----ADRVDEDVYT 210 (430)
T ss_dssp ------HHHHHS--------HHHH-HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----GGGSCTTTEE
T ss_pred ------hhhccc--------hHHH-HHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----cccCCCccEE
Confidence 000000 0000 0000000010000 01124688999999988864 2346667 99
Q ss_pred eeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC-CCCEEEEECCCCCCCCC
Q 013342 227 PIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS-KQPFLWVIRPSSNNAPE 305 (445)
Q Consensus 227 ~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~ 305 (445)
+|||....... ..+|.+..+++++||+++||......+.+..+++++++. +.+++|+++.+..
T Consensus 211 ~vG~~~~~~~~------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~---- 274 (430)
T 2iyf_A 211 FVGACQGDRAE------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVT---- 274 (430)
T ss_dssp ECCCCC-----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---C----
T ss_pred EeCCcCCCCCC------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC----
Confidence 99986532111 123655445678999999999854567788899999886 7788888754310
Q ss_pred ccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeee
Q 013342 306 GIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGL 385 (445)
Q Consensus 306 ~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~ 385 (445)
.+.+ +..++|+.+++|+||.++|+++++ ||||||+||++|++++|+|+|++|..+||..||+++++ .|+|+
T Consensus 275 -----~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~ 345 (430)
T 2iyf_A 275 -----PAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVAR 345 (430)
T ss_dssp -----GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEE
T ss_pred -----hHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEE
Confidence 0111 124578899999999999999999 99999999999999999999999999999999999999 59999
Q ss_pred EeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 013342 386 ELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 386 ~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 441 (445)
.+.. ++++++|+++|.++++| +.++++++++++++.+. ++.+++++.+.
T Consensus 346 ~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~ 395 (430)
T 2iyf_A 346 KLATEEATADLLRETALALVDD---PEVARRLRRIQAEMAQE----GGTRRAADLIE 395 (430)
T ss_dssp ECCCC-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHH----CHHHHHHHHHH
T ss_pred EcCCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHhc----CcHHHHHHHHH
Confidence 9987 78999999999999999 89999999999998876 56555555543
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.8e-35 Score=288.74 Aligned_cols=352 Identities=14% Similarity=0.141 Sum_probs=220.5
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCC---------CCCC---CCCh-hH
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLT---------ADDV---STGI-NI 67 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~---------~~~~---~~~~-~~ 67 (445)
|+|++.++.||++|++.|+++|+++||+|++++++...+.. ...|+.+..++.... .... ..+. ..
T Consensus 18 Il~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (398)
T 4fzr_A 18 ILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTV-TGAGLPFAPTCPSLDMPEVLSWDREGNRTTMPREEKPL 96 (398)
T ss_dssp EEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHH-HHTTCCEEEEESSCCHHHHHSBCTTSCBCCCCSSHHHH
T ss_pred EEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHH-HhCCCeeEecCCccchHhhhhhhccCcccccccchhhH
Confidence 57899999999999999999999999999999974322222 335788888763110 0000 0011 11
Q ss_pred HH-H-HHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHHHHHhhhhh
Q 013342 68 LI-T-NLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQISRLALLHL 145 (445)
Q Consensus 68 ~~-~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 145 (445)
+. . ..+.......+.++.+. .+.. +||+|++|...+++..+|+.+|||++.+..............
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~-~~~~--------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~~--- 164 (398)
T 4fzr_A 97 LEHIGRGYGRLVLRMRDEALAL-AERW--------KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSAG--- 164 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHH--------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhC--------CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHHH---
Confidence 11 0 01112222222222222 2222 899999998778889999999999998765432111000000
Q ss_pred hhcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH--hhhccCCcEEEEcchhhhcHHHHHHHHhccCC
Q 013342 146 EEEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS--MYKIRTSSAVIWNTMHYLEESSLAQLQQQCQV 223 (445)
Q Consensus 146 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~ 223 (445)
.....+...+ .......+..+....+.++++. .....
T Consensus 165 ------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 203 (398)
T 4fzr_A 165 ------------------------------------VGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-----KPGTT 203 (398)
T ss_dssp ------------------------------------HHHTHHHHHTTTCSSCCCCSEEEECSCGGGC---------CCCE
T ss_pred ------------------------------------HHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-----CCCCC
Confidence 0000000000 0111223455666665555431 10001
Q ss_pred CceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccC--------ChhhHHHHHHHHHhCCCCEEEE
Q 013342 224 PIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASM--------DKKEPEEMAWGLVNSKQPFLWV 295 (445)
Q Consensus 224 ~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~al~~~~~~~v~~ 295 (445)
++.++++.. ...++.+|+...+++++||+++||.... ..+.+..+++++++.+.+++|+
T Consensus 204 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~ 270 (398)
T 4fzr_A 204 KMRYVPYNG-------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVA 270 (398)
T ss_dssp ECCCCCCCC-------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEEC
T ss_pred CeeeeCCCC-------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEE
Confidence 122222110 1112456876556788999999999753 4567888999999999898888
Q ss_pred ECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHH
Q 013342 296 IRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNAR 375 (445)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~ 375 (445)
.++.. .+.+ +..++|+.+.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|...||+.||.
T Consensus 271 ~~~~~----------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~ 337 (398)
T 4fzr_A 271 VSDKL----------AQTL-QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSAR 337 (398)
T ss_dssp CCC-------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHH
T ss_pred eCCcc----------hhhh-ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHH
Confidence 74331 1111 235788999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 013342 376 YVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEF 440 (445)
Q Consensus 376 ~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 440 (445)
++++ .|+|+.++. +++++.|.++|.++|+| +.|+++++++++++.+. .+.++.++.+
T Consensus 338 ~~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~l 395 (398)
T 4fzr_A 338 LLHA-AGAGVEVPWEQAGVESVLAACARIRDD---SSYVGNARRLAAEMATL----PTPADIVRLI 395 (398)
T ss_dssp HHHH-TTSEEECC-------CHHHHHHHHHHC---THHHHHHHHHHHHHTTS----CCHHHHHHHH
T ss_pred HHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHcC----CCHHHHHHHH
Confidence 9999 599999987 78999999999999999 89999999999998875 5555555443
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.7e-34 Score=283.14 Aligned_cols=340 Identities=14% Similarity=0.184 Sum_probs=228.6
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCC---------------------CC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLT---------------------AD 59 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~---------------------~~ 59 (445)
|+|++.++.||++|++.||++|+++||+|+++++ ...... ...|+.++.++.... ..
T Consensus 23 Il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (398)
T 3oti_A 23 VLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRA-AAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRP 100 (398)
T ss_dssp EEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHH-HTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHTGGGSC
T ss_pred EEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHH-HhCCCeeEecCCccCHHHHhhhcccCCccccccccCCh
Confidence 5789999999999999999999999999999998 322222 446899999985311 00
Q ss_pred CCCC-Ch-hHHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHHHH
Q 013342 60 DVST-GI-NILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAATQI 137 (445)
Q Consensus 60 ~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~ 137 (445)
.... .. ..+. .........+.++++++ +||+||+|...+++..+|+.+|||++...........
T Consensus 101 ~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~------------~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~ 166 (398)
T 3oti_A 101 AIDLEEWGVQIA--AVNRPLVDGTMALVDDY------------RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRG 166 (398)
T ss_dssp CCSGGGGHHHHH--HHHGGGHHHHHHHHHHH------------CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTT
T ss_pred hhhHHHHHHHHH--HHHHHHHHHHHHHHHHc------------CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccc
Confidence 0001 11 2222 22222233333344433 8999999988888889999999999986543210000
Q ss_pred HHHhhhhhhhcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH--hhhccCCcEEEEcchhhhcHHHHH
Q 013342 138 SRLALLHLEEEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS--MYKIRTSSAVIWNTMHYLEESSLA 215 (445)
Q Consensus 138 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~n~~~~le~~~~~ 215 (445)
. .............. .. ....+..+....+.+.++
T Consensus 167 ~---------------------------------------~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--- 203 (398)
T 3oti_A 167 M---------------------------------------HRSIASFLTDLMDKHQVS-LPEPVATIESFPPSLLLE--- 203 (398)
T ss_dssp H---------------------------------------HHHHHTTCHHHHHHTTCC-CCCCSEEECSSCGGGGTT---
T ss_pred h---------------------------------------hhHHHHHHHHHHHHcCCC-CCCCCeEEEeCCHHHCCC---
Confidence 0 00000000001111 11 122344555554444432
Q ss_pred HHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEecccccC--ChhhHHHHHHHHHhCCCCEE
Q 013342 216 QLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASM--DKKEPEEMAWGLVNSKQPFL 293 (445)
Q Consensus 216 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~~~~~~v 293 (445)
......++.++ |. .....+.+|+...+++++||+++||.... ..+.+..+++++++.+.+++
T Consensus 204 --~~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v 267 (398)
T 3oti_A 204 --AEPEGWFMRWV-PY-------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFV 267 (398)
T ss_dssp --SCCCSBCCCCC-CC-------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEE
T ss_pred --CCCCCCCcccc-CC-------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEE
Confidence 00000112221 00 01112345776556788999999999653 56778889999999999999
Q ss_pred EEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhh
Q 013342 294 WVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVN 373 (445)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~n 373 (445)
|+.++.. ...+. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|
T Consensus 268 ~~~g~~~------~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~ 334 (398)
T 3oti_A 268 LALGDLD------ISPLG-----TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQH 334 (398)
T ss_dssp EECTTSC------CGGGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSC
T ss_pred EEECCcC------hhhhc-----cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHH
Confidence 9875431 01111 24678899999999999999999 99999999999999999999999999999999
Q ss_pred H--HHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 013342 374 A--RYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEF 440 (445)
Q Consensus 374 a--~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 440 (445)
| .++++ .|+|+.++. +.+++.|+ ++++| +.|+++++++++++.+. .+..+.++.+
T Consensus 335 a~~~~~~~-~g~g~~~~~~~~~~~~l~----~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~l 392 (398)
T 3oti_A 335 TAREAVSR-RGIGLVSTSDKVDADLLR----RLIGD---ESLRTAAREVREEMVAL----PTPAETVRRI 392 (398)
T ss_dssp TTHHHHHH-HTSEEECCGGGCCHHHHH----HHHHC---HHHHHHHHHHHHHHHTS----CCHHHHHHHH
T ss_pred HHHHHHHH-CCCEEeeCCCCCCHHHHH----HHHcC---HHHHHHHHHHHHHHHhC----CCHHHHHHHH
Confidence 9 99999 599999987 77888777 88999 89999999999999875 5655555544
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.8e-33 Score=275.27 Aligned_cols=346 Identities=14% Similarity=0.173 Sum_probs=225.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEc-CCCCC----------CCCC-C--C---
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSI-PDGLT----------ADDV-S--T--- 63 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l-~~~~~----------~~~~-~--~--- 63 (445)
|+|++.++.||++|++.|+++|+++||+|++++++...+.. ...|+.++.+ +.... .... . .
T Consensus 4 Il~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (391)
T 3tsa_A 4 VLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATA-HGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQRDTE 82 (391)
T ss_dssp EEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHH-HHBTCEEEEC--------------CCSCCGGGGCTTSH
T ss_pred EEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHH-HhCCCceeeecCCccchhhhhhhcccccccccccccch
Confidence 57899999999999999999999999999999974322111 2357888887 32110 0000 0 0
Q ss_pred Ch-hHHHHHHHHHhc-------chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHH
Q 013342 64 GI-NILITNLLNVNC-------QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAAT 135 (445)
Q Consensus 64 ~~-~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~ 135 (445)
.. ..+. ...... ...+.++++++ +||+||+|...+.+..+|+.+|||++.+.......
T Consensus 83 ~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~------------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 83 AGRQLWE--QTASNVAQSSLDQLPEYLRLAEAW------------RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH------------CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred hHHHHHH--HHHHHHhhcchhhHHHHHHHHHhc------------CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 11 1111 111111 12222233332 89999999877778889999999999865433110
Q ss_pred HHHHHhhhhhhhcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHH--hhhccCCcEEEEcchhhhcHHH
Q 013342 136 QISRLALLHLEEEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITS--MYKIRTSSAVIWNTMHYLEESS 213 (445)
Q Consensus 136 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~n~~~~le~~~ 213 (445)
... ............... .......+..+....++++.+
T Consensus 149 ~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (391)
T 3tsa_A 149 AGP--------------------------------------FSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS- 189 (391)
T ss_dssp TTH--------------------------------------HHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-
T ss_pred ccc--------------------------------------ccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-
Confidence 000 000000000111111 111122355566665555532
Q ss_pred HHHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchhhccCCCCceEEEEeccccc--CC-hhhHHHHHHHHHhC-C
Q 013342 214 LAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVAS--MD-KKEPEEMAWGLVNS-K 289 (445)
Q Consensus 214 ~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~al~~~-~ 289 (445)
......++.++ |.. ....+.+|+...+++++|++++||... .. .+.+..++++ ++. +
T Consensus 190 ----~~~~~~~~~~~-p~~-------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~ 250 (391)
T 3tsa_A 190 ----DAPQGAPVQYV-PYN-------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPG 250 (391)
T ss_dssp ----TSCCCEECCCC-CCC-------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTT
T ss_pred ----CCCccCCeeee-cCC-------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCC
Confidence 00011112233 111 111234677655678899999999854 23 6667888888 887 6
Q ss_pred CCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccc
Q 013342 290 QPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGD 369 (445)
Q Consensus 290 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~D 369 (445)
.+++|+.++.. ...+. ..++|+.+.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|...|
T Consensus 251 ~~~v~~~~~~~------~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~ 317 (391)
T 3tsa_A 251 VEAVIAVPPEH------RALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFD 317 (391)
T ss_dssp EEEEEECCGGG------GGGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred eEEEEEECCcc------hhhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCccc
Confidence 68888764320 11111 24678899999999999999999 9999999999999999999999999999
Q ss_pred hhhhHHHHHhhheeeeEeCc---ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 013342 370 QRVNARYVSHVWRTGLELEN---ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEF 440 (445)
Q Consensus 370 Q~~na~~v~~~~G~g~~~~~---~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 440 (445)
|+.|+.++++ .|+|+.+.. +.+++.|.++|.++|+| +.++++++++++++.+. .+..++++.+
T Consensus 318 q~~~a~~~~~-~g~g~~~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i 383 (391)
T 3tsa_A 318 QFDYARNLAA-AGAGICLPDEQAQSDHEQFTDSIATVLGD---TGFAAAAIKLSDEITAM----PHPAALVRTL 383 (391)
T ss_dssp HHHHHHHHHH-TTSEEECCSHHHHTCHHHHHHHHHHHHTC---THHHHHHHHHHHHHHTS----CCHHHHHHHH
T ss_pred HHHHHHHHHH-cCCEEecCcccccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHcC----CCHHHHHHHH
Confidence 9999999999 599999874 47999999999999999 89999999999988775 5665555544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.98 E-value=9.2e-31 Score=257.69 Aligned_cols=353 Identities=19% Similarity=0.185 Sum_probs=233.9
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCC------------CCCCCC--CC---
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDG------------LTADDV--ST--- 63 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~------------~~~~~~--~~--- 63 (445)
|+|++.++.||++|++.|+++|+++||+|++++++.. .......|+.++.++.. ...... ..
T Consensus 23 Il~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (412)
T 3otg_A 23 VLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGF-AGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQ 101 (412)
T ss_dssp EEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGG-HHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTTCCHHH
T ss_pred EEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHH-HHHHHhcCCceeecCcccccchhhhhhhhhcccCCccCChhH
Confidence 5789999999999999999999999999999998532 21113358999998841 000000 00
Q ss_pred Ch-hHHHHHHHHHh----cchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHH----
Q 013342 64 GI-NILITNLLNVN----CQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAA---- 134 (445)
Q Consensus 64 ~~-~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~---- 134 (445)
.. .+.. .+... ....+.+++++. +||+||+|....++..+|+.+|||+|........
T Consensus 102 ~~~~~~~--~~~~~~~~~~~~~l~~~l~~~------------~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~ 167 (412)
T 3otg_A 102 LSELPQI--VFGRVIPQRVFDELQPVIERL------------RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDL 167 (412)
T ss_dssp HTTSHHH--HHHTHHHHHHHHHHHHHHHHH------------CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHH
T ss_pred hhHHHHH--HHhccchHHHHHHHHHHHHhc------------CCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhh
Confidence 01 1111 11111 112222333333 9999999977777888999999999986543211
Q ss_pred HHHHH-HhhhhhhhcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHH
Q 013342 135 TQISR-LALLHLEEEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESS 213 (445)
Q Consensus 135 ~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~ 213 (445)
..... .........+..+... ......+.++..+...++++.
T Consensus 168 ~~~~~~~~~~~~~~~g~~~~~~-------------------------------------~~~~~~d~~i~~~~~~~~~~~ 210 (412)
T 3otg_A 168 TRSIEEEVRGLAQRLGLDLPPG-------------------------------------RIDGFGNPFIDIFPPSLQEPE 210 (412)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSS-------------------------------------CCGGGGCCEEECSCGGGSCHH
T ss_pred hHHHHHHHHHHHHHcCCCCCcc-------------------------------------cccCCCCeEEeeCCHHhcCCc
Confidence 00000 0000000001000000 001345666777766666431
Q ss_pred HHHHHhccCCCceeeccCCCCCCCCCCCCCcCCCchhchh-hccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCE
Q 013342 214 LAQLQQQCQVPIFPIGPFHKFAPFSTSCNFLNEDTSCISW-LNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPF 292 (445)
Q Consensus 214 ~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~l~~w-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 292 (445)
..+......+-+.. .. ......+| ....+++++|++++||......+.+..+++++++.+.++
T Consensus 211 -----~~~~~~~~~~~~~~---~~--------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~ 274 (412)
T 3otg_A 211 -----FRARPRRHELRPVP---FA--------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADV 274 (412)
T ss_dssp -----HHTCTTEEECCCCC---CC--------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEE
T ss_pred -----ccCCCCcceeeccC---CC--------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEE
Confidence 11211111111111 00 11123456 232467789999999997556677888999999888899
Q ss_pred EEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhh
Q 013342 293 LWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRV 372 (445)
Q Consensus 293 v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~ 372 (445)
+|+.+.+.. .+.+.. .++|+.+.+|+|+.++|+++|+ ||+|||+||++||+++|+|+|++|...||..
T Consensus 275 ~~~~g~~~~-----~~~l~~-----~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~ 342 (412)
T 3otg_A 275 LVASGPSLD-----VSGLGE-----VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFA 342 (412)
T ss_dssp EEECCSSCC-----CTTCCC-----CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred EEEECCCCC-----hhhhcc-----CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHH
Confidence 888754421 111111 3578899999999999999999 9999999999999999999999999999999
Q ss_pred hHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 013342 373 NARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFL 441 (445)
Q Consensus 373 na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 441 (445)
|+.++++ .|+|..+.. ++++++|+++|.++++| +.+++++.+.++++.+. .+.++.++.+.
T Consensus 343 ~~~~v~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 404 (412)
T 3otg_A 343 NAQAVAQ-AGAGDHLLPDNISPDSVSGAAKRLLAE---ESYRAGARAVAAEIAAM----PGPDEVVRLLP 404 (412)
T ss_dssp HHHHHHH-HTSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHS----CCHHHHHTTHH
T ss_pred HHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHhcC----CCHHHHHHHHH
Confidence 9999999 499999987 78999999999999999 89999999999888875 56655555443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=3.7e-28 Score=234.71 Aligned_cols=306 Identities=12% Similarity=0.105 Sum_probs=189.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEEcCC-CCCCCCCCCCh-hHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPPN-PSNHPEFNFQSIPD-GLTADDVSTGI-NILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~-~~~~~~~~~~~l~~-~~~~~~~~~~~-~~~~~~~~~~~~ 77 (445)
|+|...++-||++|.++||++|+++||+|+|+++....+. .....|+.++.++. +++.......+ ..+. +....
T Consensus 5 i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~ 81 (365)
T 3s2u_A 5 VLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLE---LLKSL 81 (365)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHH---HHHHH
T ss_pred EEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHH---HHHHH
Confidence 4566666779999999999999999999999998543322 23445899998883 22221111011 1111 11111
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCC--chHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCC
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFY--FPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQD 155 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (445)
. ....++++. +||+||++.... ++..+|+.+|||++..-.
T Consensus 82 ~-~~~~~l~~~------------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~------------------------- 123 (365)
T 3s2u_A 82 F-QALRVIRQL------------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ------------------------- 123 (365)
T ss_dssp H-HHHHHHHHH------------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-------------------------
T ss_pred H-HHHHHHHhc------------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-------------------------
Confidence 1 112345554 999999997653 455789999999997311
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCC
Q 013342 156 PNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFA 235 (445)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~ 235 (445)
+.++++. .++ ..+.++.++ .++++.-+ ...+.+++|......
T Consensus 124 -----n~~~G~~------------------nr~-----l~~~a~~v~-~~~~~~~~---------~~~k~~~~g~pvr~~ 165 (365)
T 3s2u_A 124 -----NAVAGTA------------------NRS-----LAPIARRVC-EAFPDTFP---------ASDKRLTTGNPVRGE 165 (365)
T ss_dssp -----SSSCCHH------------------HHH-----HGGGCSEEE-ESSTTSSC---------C---CEECCCCCCGG
T ss_pred -----chhhhhH------------------HHh-----hccccceee-eccccccc---------CcCcEEEECCCCchh
Confidence 0011110 000 001123333 23332111 124567777665433
Q ss_pred CCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCC----CCEEEEECCCCCCCCCccCCch
Q 013342 236 PFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSK----QPFLWVIRPSSNNAPEGIDLLP 311 (445)
Q Consensus 236 ~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~----~~~v~~~~~~~~~~~~~~~~~~ 311 (445)
.. .+. ..+....++++.|++..||... ....+.+.+++.+++ ..++|+++.. ..+.+.
T Consensus 166 ~~--------~~~--~~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi~~~G~~------~~~~~~ 227 (365)
T 3s2u_A 166 LF--------LDA--HARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIRHQAGRQ------HAEITA 227 (365)
T ss_dssp GC--------CCT--TSSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEEEECCTT------THHHHH
T ss_pred hc--------cch--hhhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEEEecCcc------cccccc
Confidence 21 000 1111112566789999998764 334455677777654 3455655322 011111
Q ss_pred HHHHHHhcCCcEEEEeccH-HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcc----cchhhhHHHHHhhheeeeE
Q 013342 312 EVLAEAVQENGCIVKWAPQ-KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCF----GDQRVNARYVSHVWRTGLE 386 (445)
Q Consensus 312 ~~~~~~~~~n~~~~~~~pq-~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~----~DQ~~na~~v~~~~G~g~~ 386 (445)
+ .....+.++.+.+|+++ .++|..+|+ +|||+|.+|++|++++|+|+|++|+. .+|..||+.+++. |+|+.
T Consensus 228 ~-~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~ 303 (365)
T 3s2u_A 228 E-RYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRL 303 (365)
T ss_dssp H-HHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEE
T ss_pred c-eecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEE
Confidence 1 12334578889999997 569999999 99999999999999999999999973 6899999999994 99999
Q ss_pred eCc-ccCHHHHHHHHHHHhcCC
Q 013342 387 LEN-ELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 387 ~~~-~~t~~~l~~ai~~ll~~~ 407 (445)
++. ++|++.|.++|.++++|+
T Consensus 304 l~~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 304 LPQKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp CCTTTCCHHHHHHHHHHHHHCT
T ss_pred eecCCCCHHHHHHHHHHHHCCH
Confidence 987 899999999999999993
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.4e-27 Score=203.91 Aligned_cols=160 Identities=22% Similarity=0.376 Sum_probs=134.9
Q ss_pred CCchhchhhccCCCCceEEEEeccccc-CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEE
Q 013342 246 EDTSCISWLNNQAPESVIYVSLGSVAS-MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCI 324 (445)
Q Consensus 246 ~~~~l~~wl~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 324 (445)
.+.++.+|++..+++++||+++||... ...+.+..+++++++.+.+++|++++. .++ ..++|+.+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----------~~~----~~~~~v~~ 72 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN----------KPD----TLGLNTRL 72 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS----------CCT----TCCTTEEE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc----------Ccc----cCCCcEEE
Confidence 345689999866677899999999974 466778889999999889999998533 111 13568899
Q ss_pred EEeccHHHHh--hccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHH
Q 013342 325 VKWAPQKEVL--SHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN-ELEREVVEKAVR 401 (445)
Q Consensus 325 ~~~~pq~~lL--~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~ 401 (445)
.+|+||.++| +.+++ +|||||+||++|++++|+|+|++|...||..||+++++ .|+|+.++. +++.++|.++|.
T Consensus 73 ~~~~~~~~~l~~~~ad~--~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~ 149 (170)
T 2o6l_A 73 YKWIPQNDLLGHPKTRA--FITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALK 149 (170)
T ss_dssp ESSCCHHHHHTSTTEEE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHH
T ss_pred ecCCCHHHHhcCCCcCE--EEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHH
Confidence 9999999999 56666 99999999999999999999999999999999999999 599999987 789999999999
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHH
Q 013342 402 RLMVGEEGEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 402 ~ll~~~~~~~~~~~a~~l~~~~~~ 425 (445)
++++| +.|+++|+++++.+++
T Consensus 150 ~ll~~---~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 150 RVIND---PSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHC---HHHHHHHHHHC-----
T ss_pred HHHcC---HHHHHHHHHHHHHhhC
Confidence 99999 8999999999998864
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.82 E-value=7.2e-19 Score=169.62 Aligned_cols=307 Identities=13% Similarity=0.068 Sum_probs=186.9
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCCCCCceEEEcCCC-CCCCCCCCCh-hHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPP-NPSNHPEFNFQSIPDG-LTADDVSTGI-NILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~-~~~~~~~~~~~~l~~~-~~~~~~~~~~-~~~~~~~~~~~~ 77 (445)
|++++.+..||..+++.|+++|.++||+|++++...... ......|+.++.++.. .........+ .... ... .
T Consensus 9 Il~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~ 84 (364)
T 1f0k_A 9 LMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLR---IFN-A 84 (364)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHH---HHH-H
T ss_pred EEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHH---HHH-H
Confidence 467777777999999999999999999999999854221 1112247888877632 1111000001 1111 111 1
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCC
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQD 155 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (445)
...+..++++. +||+|+++... ..+..+++.+|+|++.......
T Consensus 85 ~~~l~~~l~~~------------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---------------------- 130 (364)
T 1f0k_A 85 WRQARAIMKAY------------KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI---------------------- 130 (364)
T ss_dssp HHHHHHHHHHH------------CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS----------------------
T ss_pred HHHHHHHHHhc------------CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC----------------------
Confidence 11222233333 89999998644 3455678889999986322110
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccCCCceeeccCCCCC
Q 013342 156 PNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQVPIFPIGPFHKFA 235 (445)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~ 235 (445)
++. ..+ ...+.++.++..+... + +++..||......
T Consensus 131 --------~~~------------------~~~-----~~~~~~d~v~~~~~~~------------~-~~~~~i~n~v~~~ 166 (364)
T 1f0k_A 131 --------AGL------------------TNK-----WLAKIATKVMQAFPGA------------F-PNAEVVGNPVRTD 166 (364)
T ss_dssp --------CCH------------------HHH-----HHTTTCSEEEESSTTS------------S-SSCEECCCCCCHH
T ss_pred --------CcH------------------HHH-----HHHHhCCEEEecChhh------------c-CCceEeCCccchh
Confidence 000 000 0113345555543211 2 2455666433211
Q ss_pred CCCCCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC--CCCEEEEECCCCCCCCCccCCchHH
Q 013342 236 PFSTSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS--KQPFLWVIRPSSNNAPEGIDLLPEV 313 (445)
Q Consensus 236 ~~~~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~~~ 313 (445)
. ..... ..+.+....++++++++.|+.. ..+....++++++.+ +.+++++++.+. .+.
T Consensus 167 ~-------~~~~~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~----------~~~ 226 (364)
T 1f0k_A 167 V-------LALPL-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGS----------QQS 226 (364)
T ss_dssp H-------HTSCC-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTC----------HHH
T ss_pred h-------cccch-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCch----------HHH
Confidence 1 00110 1112221235567878888775 344455566777665 345556654331 122
Q ss_pred HHH---Hhc-CCcEEEEeccH-HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcc---cchhhhHHHHHhhheeee
Q 013342 314 LAE---AVQ-ENGCIVKWAPQ-KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCF---GDQRVNARYVSHVWRTGL 385 (445)
Q Consensus 314 ~~~---~~~-~n~~~~~~~pq-~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~g~ 385 (445)
+.+ ... +|+.+.+|+++ ..+|..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|.
T Consensus 227 l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~ 303 (364)
T 1f0k_A 227 VEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAK 303 (364)
T ss_dssp HHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEE
T ss_pred HHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEE
Confidence 221 222 58999999954 779999999 99999989999999999999999987 7999999999995 9999
Q ss_pred EeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 013342 386 ELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAK 417 (445)
Q Consensus 386 ~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~ 417 (445)
.++. ++++++|+++|.++ | +..++++.
T Consensus 304 ~~~~~d~~~~~la~~i~~l--~---~~~~~~~~ 331 (364)
T 1f0k_A 304 IIEQPQLSVDAVANTLAGW--S---RETLLTMA 331 (364)
T ss_dssp ECCGGGCCHHHHHHHHHTC--C---HHHHHHHH
T ss_pred EeccccCCHHHHHHHHHhc--C---HHHHHHHH
Confidence 8887 67799999999988 6 45444433
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.62 E-value=5.8e-16 Score=136.48 Aligned_cols=133 Identities=13% Similarity=0.033 Sum_probs=96.3
Q ss_pred CCCCceEEEEecccccCChhhHHHH-----HHHHHhCC-CCEEEEECCCCCCCCCccCCchHHHHHHh---------c--
Q 013342 257 QAPESVIYVSLGSVASMDKKEPEEM-----AWGLVNSK-QPFLWVIRPSSNNAPEGIDLLPEVLAEAV---------Q-- 319 (445)
Q Consensus 257 ~~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~-- 319 (445)
..++++|||+.||... -.+.+..+ +++|.+.+ .+++++++..... ....+.... |
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhccccccccccc
Confidence 3567899999999742 23333333 48888877 6888888654210 001111011 1
Q ss_pred ---------------C--CcEEEEeccHH-HHhh-ccccCceeeccCchhHHHHHhhCCCcccCCcc----cchhhhHHH
Q 013342 320 ---------------E--NGCIVKWAPQK-EVLS-HVAVGGFWSHCGWNSTLECLCEGVPMICRPCF----GDQRVNARY 376 (445)
Q Consensus 320 ---------------~--n~~~~~~~pq~-~lL~-~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~----~DQ~~na~~ 376 (445)
. ++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 1 33455887774 7999 9999 99999999999999999999999974 479999999
Q ss_pred HHhhheeeeEeCcccCHHHHHHHHHHHh
Q 013342 377 VSHVWRTGLELENELEREVVEKAVRRLM 404 (445)
Q Consensus 377 v~~~~G~g~~~~~~~t~~~l~~ai~~ll 404 (445)
+++ .|+++.+ +++.|.++|.++.
T Consensus 175 l~~-~G~~~~~----~~~~L~~~i~~l~ 197 (224)
T 2jzc_A 175 FVE-LGYVWSC----APTETGLIAGLRA 197 (224)
T ss_dssp HHH-HSCCCEE----CSCTTTHHHHHHH
T ss_pred HHH-CCCEEEc----CHHHHHHHHHHHH
Confidence 999 5998765 5678888888873
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.54 E-value=7.8e-13 Score=121.43 Aligned_cols=116 Identities=11% Similarity=0.032 Sum_probs=89.6
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHh--cCCcEEEEeccHH-HHhh
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAV--QENGCIVKWAPQK-EVLS 335 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~pq~-~lL~ 335 (445)
+.+.|+|++|... .......+++++.+.. ++.++++++. ...+.+.+.. ..|+.+..|+++. ++|.
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~--------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSN--------PNLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTC--------TTHHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCc--------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 4568999999754 3345667888887654 5666665441 1223333222 2588999999875 5999
Q ss_pred ccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc
Q 013342 336 HVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 389 (445)
.+|+ +||+|| +|++|+++.|+|+|++|...+|..||+.+++ .|++..+..
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 9999 999999 8999999999999999999999999999999 599998865
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.36 E-value=2e-10 Score=113.19 Aligned_cols=345 Identities=13% Similarity=0.074 Sum_probs=176.8
Q ss_pred CccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCC---CCCCCceEEEcCCCCCCCCCCCCh-hHHHHHHHHHhcchHHHH
Q 013342 8 FQGHMTPMLQLGTILYSNGFSITVVHTHFNPPNP---SNHPEFNFQSIPDGLTADDVSTGI-NILITNLLNVNCQAPFFE 83 (445)
Q Consensus 8 ~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (445)
..|+-..+..|++.|.++||+|++++........ ....++.++.++..........++ ..+. .+. ..
T Consensus 41 ~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~--~~~-------~~ 111 (438)
T 3c48_A 41 SGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLA--AFT-------GG 111 (438)
T ss_dssp --CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSCCGGGGGGGHH--HHH-------HH
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCccccchhHHHHHHH--HHH-------HH
Confidence 3577888999999999999999999875332111 112577887776422111000012 2222 111 11
Q ss_pred HHHHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCCCCCc
Q 013342 84 CMVRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNKLQD 161 (445)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (445)
++..+.+.. . +||+|++.... ..+..+++.+++|+|.......... ..... .
T Consensus 112 ~~~~~~~~~------~-~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-----------~~~~~--~------ 165 (438)
T 3c48_A 112 MLSFTRREK------V-TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK-----------NSYRD--D------ 165 (438)
T ss_dssp HHHHHHHHT------C-CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH-----------SCC-----------
T ss_pred HHHHHHhcc------C-CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc-----------ccccc--c------
Confidence 222212222 1 59999987533 2344567788999987554432110 00000 0
Q ss_pred CCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccC---CCceeeccCCCCCCCC
Q 013342 162 PVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ---VPIFPIGPFHKFAPFS 238 (445)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~---~~~~~vGp~~~~~~~~ 238 (445)
... ......... ....+..++.++..+....+. +...++ .++..|..........
T Consensus 166 ----------~~~------~~~~~~~~~-~~~~~~~~d~ii~~s~~~~~~-----~~~~~g~~~~k~~vi~ngvd~~~~~ 223 (438)
T 3c48_A 166 ----------SDT------PESEARRIC-EQQLVDNADVLAVNTQEEMQD-----LMHHYDADPDRISVVSPGADVELYS 223 (438)
T ss_dssp -----------CC------HHHHHHHHH-HHHHHHHCSEEEESSHHHHHH-----HHHHHCCCGGGEEECCCCCCTTTSC
T ss_pred ----------cCC------cchHHHHHH-HHHHHhcCCEEEEcCHHHHHH-----HHHHhCCChhheEEecCCccccccC
Confidence 000 000000000 012345688899888654432 233232 2355555443222110
Q ss_pred CCCCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCC-----CCEE-EEECCCCCCCCCccCCchH
Q 013342 239 TSCNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSK-----QPFL-WVIRPSSNNAPEGIDLLPE 312 (445)
Q Consensus 239 ~~~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~v-~~~~~~~~~~~~~~~~~~~ 312 (445)
.........+.+-+. .+++..+++..|+... .+....++++++.+. .++- +.++.....+ .....+.+
T Consensus 224 --~~~~~~~~~~r~~~~-~~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g-~~~~~l~~ 297 (438)
T 3c48_A 224 --PGNDRATERSRRELG-IPLHTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPN-ATPDTYRH 297 (438)
T ss_dssp --CC----CHHHHHHTT-CCSSSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-------CHHHH
T ss_pred --CcccchhhhhHHhcC-CCCCCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCC-cHHHHHHH
Confidence 000000001222222 1234466778888753 344555555554431 1332 3333210001 00111111
Q ss_pred HHHHH--hcCCcEEEEeccHH---HHhhccccCceeecc---C-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhhee
Q 013342 313 VLAEA--VQENGCIVKWAPQK---EVLSHVAVGGFWSHC---G-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRT 383 (445)
Q Consensus 313 ~~~~~--~~~n~~~~~~~pq~---~lL~~~~~~~~I~Hg---G-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 383 (445)
..+. ..+++.+.+++|+. .+|..+++ +|.-. | ..+++||+++|+|+|+.+. ......+++. +.
T Consensus 298 -~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~ 369 (438)
T 3c48_A 298 -MAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ET 369 (438)
T ss_dssp -HHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TT
T ss_pred -HHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-Cc
Confidence 2222 24789999999875 48889998 77543 2 4589999999999999754 4556667773 77
Q ss_pred eeEeCcccCHHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHH
Q 013342 384 GLELENELEREVVEKAVRRLMVGEE-GEEMRQRAKNLKEEIE 424 (445)
Q Consensus 384 g~~~~~~~t~~~l~~ai~~ll~~~~-~~~~~~~a~~l~~~~~ 424 (445)
|..++. -+.++++++|.++++|++ ...+.+++++..+.+.
T Consensus 370 g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s 410 (438)
T 3c48_A 370 GLLVDG-HSPHAWADALATLLDDDETRIRMGEDAVEHARTFS 410 (438)
T ss_dssp EEEESS-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC
Confidence 887764 578999999999999832 2234455555554433
No 26
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.25 E-value=1.1e-09 Score=106.37 Aligned_cols=303 Identities=14% Similarity=0.107 Sum_probs=160.3
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcchHHHHHHHHH
Q 013342 9 QGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVSTGINILITNLLNVNCQAPFFECMVRM 88 (445)
Q Consensus 9 ~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 88 (445)
.|.-.-...|++.|.++||+|++++............++.+..++....... ....... .. ...+.+++++.
T Consensus 27 GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~--~~----~~~l~~~l~~~ 98 (394)
T 2jjm_A 27 GGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVF--QYPPYDL--AL----ASKMAEVAQRE 98 (394)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----C--CSCCHHH--HH----HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEeccccccccc--ccccccH--HH----HHHHHHHHHHc
Confidence 4566778899999999999999999853322212345677766652110000 0000000 01 11222344443
Q ss_pred HhhccCCCCCCCCceEEEEcCCCCc--hHHHHHHh---CCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCCCCCcCC
Q 013342 89 MEQQQQHPAGDDQIACIIYDEIFYF--PEAAANQL---NLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNKLQDPV 163 (445)
Q Consensus 89 ~~~~~~~~~~~~~~D~vv~D~~~~~--~~~~A~~~---giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 163 (445)
+||+|++...... ...++..+ ++|+|......... . ... .
T Consensus 99 ------------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-----~------~~~----~-------- 143 (394)
T 2jjm_A 99 ------------NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT-----V------LGS----D-------- 143 (394)
T ss_dssp ------------TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-----T------TTT----C--------
T ss_pred ------------CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-----c------cCC----C--------
Confidence 8999998754422 23344443 59988754432110 0 000 0
Q ss_pred CCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccC--CCceeeccCCCCCCCCCCC
Q 013342 164 PGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ--VPIFPIGPFHKFAPFSTSC 241 (445)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~--~~~~~vGp~~~~~~~~~~~ 241 (445)
. ......+ ..+..++.++..+....+. +...++ .++..|.........
T Consensus 144 ----~------------~~~~~~~-----~~~~~ad~ii~~s~~~~~~-----~~~~~~~~~~~~vi~ngv~~~~~---- 193 (394)
T 2jjm_A 144 ----P------------SLNNLIR-----FGIEQSDVVTAVSHSLINE-----THELVKPNKDIQTVYNFIDERVY---- 193 (394)
T ss_dssp ----T------------TTHHHHH-----HHHHHSSEEEESCHHHHHH-----HHHHTCCSSCEEECCCCCCTTTC----
T ss_pred ----H------------HHHHHHH-----HHHhhCCEEEECCHHHHHH-----HHHhhCCcccEEEecCCccHHhc----
Confidence 0 0000011 1235578888888644332 334333 356666544432211
Q ss_pred CCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC----CCCEEEEECCCCCCCCCccCCchHHHHHH
Q 013342 242 NFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS----KQPFLWVIRPSSNNAPEGIDLLPEVLAEA 317 (445)
Q Consensus 242 ~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 317 (445)
.......+.+-+. .+++..+++..|+.. ..+....++++++.+ +.++ +.++.+ ...+.+.+.
T Consensus 194 -~~~~~~~~~~~~~-~~~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l-~i~G~g---------~~~~~l~~~ 259 (394)
T 2jjm_A 194 -FKRDMTQLKKEYG-ISESEKILIHISNFR--KVKRVQDVVQAFAKIVTEVDAKL-LLVGDG---------PEFCTILQL 259 (394)
T ss_dssp -CCCCCHHHHHHTT-CC---CEEEEECCCC--GGGTHHHHHHHHHHHHHSSCCEE-EEECCC---------TTHHHHHHH
T ss_pred -CCcchHHHHHHcC-CCCCCeEEEEeeccc--cccCHHHHHHHHHHHHhhCCCEE-EEECCc---------hHHHHHHHH
Confidence 0011112222222 123445667778775 334455566666543 3333 333322 112222221
Q ss_pred -----hcCCcEEEEeccH-HHHhhccccCcee----eccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEe
Q 013342 318 -----VQENGCIVKWAPQ-KEVLSHVAVGGFW----SHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLEL 387 (445)
Q Consensus 318 -----~~~n~~~~~~~pq-~~lL~~~~~~~~I----~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~ 387 (445)
..+++.+.++..+ ..+|..+++ +| .-|..+++.||+++|+|+|+.+.. .....+++. +.|..+
T Consensus 260 ~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g~~~ 332 (394)
T 2jjm_A 260 VKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTGYLC 332 (394)
T ss_dssp HHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTEEEE
T ss_pred HHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-CceEEe
Confidence 1467888887554 569999998 77 445567899999999999998653 334445553 677777
Q ss_pred CcccCHHHHHHHHHHHhcC
Q 013342 388 ENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 388 ~~~~t~~~l~~ai~~ll~~ 406 (445)
+. -+.++++++|.++++|
T Consensus 333 ~~-~d~~~la~~i~~l~~~ 350 (394)
T 2jjm_A 333 EV-GDTTGVADQAIQLLKD 350 (394)
T ss_dssp CT-TCHHHHHHHHHHHHHC
T ss_pred CC-CCHHHHHHHHHHHHcC
Confidence 64 4789999999999998
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.21 E-value=2.8e-09 Score=104.68 Aligned_cols=350 Identities=11% Similarity=0.076 Sum_probs=172.4
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-------------------CCCCceEEEcCCCC-CCCCCCCCh--h
Q 013342 9 QGHMTPMLQLGTILYSNGFSITVVHTHFNPPNPS-------------------NHPEFNFQSIPDGL-TADDVSTGI--N 66 (445)
Q Consensus 9 ~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~-------------------~~~~~~~~~l~~~~-~~~~~~~~~--~ 66 (445)
.|--.-+..|++.|+++||+|+++++........ ...|+.++.++... ......... .
T Consensus 18 gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~ 97 (439)
T 3fro_A 18 GGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDG 97 (439)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEESGGGGCSSTTCSHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEecchhccccccccCCcch
Confidence 3444558899999999999999999753332210 23467777776411 011000011 1
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCC--chHHHHHHhCCceEEEccchHHHH--HHHHhh
Q 013342 67 ILITNLLNVNCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFY--FPEAAANQLNLQSIILRTTSAATQ--ISRLAL 142 (445)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~--~~~~~~ 142 (445)
+.. .+. .....+..++..+.... . +||+|.+..... .+..+++..++|+|.......... .....
T Consensus 98 ~~~--~~~-~~~~~~~~~~~~~~~~~------~-~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~- 166 (439)
T 3fro_A 98 LIR--KAV-TFGRASVLLLNDLLREE------P-LPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFH- 166 (439)
T ss_dssp HHH--HHH-HHHHHHHHHHHHHTTTS------C-CCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHH-
T ss_pred hhh--hhH-HHHHHHHHHHHHHhccC------C-CCeEEEecchhhhhhHHHHhhccCCCEEEEecccccccCchHHhC-
Confidence 112 111 12222233444442222 2 899999875442 245667788999988544321000 00000
Q ss_pred hhhhhcCCCCCCCCCCCCcCCCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccC
Q 013342 143 LHLEEEGSSPLQDPNKLQDPVPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ 222 (445)
Q Consensus 143 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~ 222 (445)
.. . +... .... .. ... ...+..++.++..+....+. ....+ +..+
T Consensus 167 -----~~--------~----~~~~---~~~~-------~~-~~~-----~~~~~~ad~ii~~S~~~~~~-~~~~~-~~~~ 211 (439)
T 3fro_A 167 -----EA--------G----LSEL---APYP-------DI-DPE-----HTGGYIADIVTTVSRGYLID-EWGFF-RNFE 211 (439)
T ss_dssp -----HT--------T----CGGG---CCSS-------EE-CHH-----HHHHHHCSEEEESCHHHHHH-THHHH-GGGT
T ss_pred -----cc--------c----cccc---cccc-------ee-eHh-----hhhhhhccEEEecCHHHHHH-Hhhhh-hhcC
Confidence 00 0 0000 0000 00 000 12235678888888755443 11111 1122
Q ss_pred CCceeeccCCCCCCCCCCCCCcC-----CCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC---C--CCE
Q 013342 223 VPIFPIGPFHKFAPFSTSCNFLN-----EDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS---K--QPF 292 (445)
Q Consensus 223 ~~~~~vGp~~~~~~~~~~~~~~~-----~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~--~~~ 292 (445)
.++..|..-....... ....+ ....+.+-+. .+++ .+++..|+... ..+....++++++.+ . .++
T Consensus 212 ~~i~vi~ngvd~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-~~i~~~G~~~~-~~Kg~~~li~a~~~l~~~~~~~~~ 286 (439)
T 3fro_A 212 GKITYVFNGIDCSFWN--ESYLTGSRDERKKSLLSKFG-MDEG-VTFMFIGRFDR-GQKGVDVLLKAIEILSSKKEFQEM 286 (439)
T ss_dssp TSEEECCCCCCTTTSC--GGGSCSCHHHHHHHHHHHHT-CCSC-EEEEEECCSSC-TTBCHHHHHHHHHHHHTSGGGGGE
T ss_pred CceeecCCCCCchhcC--cccccchhhhhHHHHHHHcC-CCCC-cEEEEEccccc-ccccHHHHHHHHHHHHhcccCCCe
Confidence 4555554433221110 00000 0111222222 1334 77788888761 223344455555433 1 233
Q ss_pred EEE-ECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHH---HhhccccCceeec----cCchhHHHHHhhCCCcccC
Q 013342 293 LWV-IRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKE---VLSHVAVGGFWSH----CGWNSTLECLCEGVPMICR 364 (445)
Q Consensus 293 v~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~---lL~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~ 364 (445)
-+. ++.+. +.....-....+..++++.+.+|+|+.+ ++..+++ +|.- |--++++||+++|+|+|+.
T Consensus 287 ~l~i~G~g~----~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s 360 (439)
T 3fro_A 287 RFIIIGKGD----PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIAS 360 (439)
T ss_dssp EEEEECCCC----HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEE
T ss_pred EEEEEcCCC----hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEc
Confidence 233 32220 0000001112223344455668899865 7888998 6643 3346899999999999997
Q ss_pred CcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhc-CCc-HHHHHHHHHHHHHH
Q 013342 365 PCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMV-GEE-GEEMRQRAKNLKEE 422 (445)
Q Consensus 365 P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~-~~~-~~~~~~~a~~l~~~ 422 (445)
.. ......++. |.|..++. -++++++++|.++++ |++ ...+.+++++..+.
T Consensus 361 ~~----~~~~e~~~~--~~g~~~~~-~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~ 413 (439)
T 3fro_A 361 AV----GGLRDIITN--ETGILVKA-GDPGELANAILKALELSRSDLSKFRENCKKRAMS 413 (439)
T ss_dssp SS----THHHHHCCT--TTCEEECT-TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT
T ss_pred CC----CCcceeEEc--CceEEeCC-CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Confidence 44 445555544 67877774 588999999999998 642 34455555555433
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.17 E-value=2.6e-09 Score=103.37 Aligned_cols=299 Identities=12% Similarity=0.080 Sum_probs=164.9
Q ss_pred CccChHHHHHHHHHHHhCCCeEEEEeCCCCCC---CCCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcchHHHHH
Q 013342 8 FQGHMTPMLQLGTILYSNGFSITVVHTHFNPP---NPSNHPEFNFQSIPDGLTADDVSTGINILITNLLNVNCQAPFFEC 84 (445)
Q Consensus 8 ~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (445)
..|.-.-+..|++.| +||+|++++...... ......++.+..++....- .... .. ..+..+
T Consensus 18 ~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~~-----~~l~~~ 81 (394)
T 3okp_A 18 IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVML-------PTPT--TA-----HAMAEI 81 (394)
T ss_dssp CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCC-------SCHH--HH-----HHHHHH
T ss_pred cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccc-------cchh--hH-----HHHHHH
Confidence 467888899999999 799999999854332 1113346777777742111 0001 11 111223
Q ss_pred HHHHHhhccCCCCCCCCceEEEEcCCC--CchHHHHHHhCCceEEEccchHHHHHHHHhhhhhhhcCCCCCCCCCCCCcC
Q 013342 85 MVRMMEQQQQHPAGDDQIACIIYDEIF--YFPEAAANQLNLQSIILRTTSAATQISRLALLHLEEEGSSPLQDPNKLQDP 162 (445)
Q Consensus 85 l~~~~~~~~~~~~~~~~~D~vv~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 162 (445)
+++. +||+|++.... .....+++.+++|.+.+........ . .
T Consensus 82 ~~~~------------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~-~--------------------- 125 (394)
T 3okp_A 82 IRER------------EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG--W-S--------------------- 125 (394)
T ss_dssp HHHT------------TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH--H-T---------------------
T ss_pred HHhc------------CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh--h-h---------------------
Confidence 3332 89999986554 3345567889998544322211100 0 0
Q ss_pred CCCCCCCCCCCCCCcccccchHHHHHHHHhhhccCCcEEEEcchhhhcHHHHHHHHhccC--CCceeeccCCCCCCCCCC
Q 013342 163 VPGLHPLRFKDLPTYRHEIMEHYLQLITSMYKIRTSSAVIWNTMHYLEESSLAQLQQQCQ--VPIFPIGPFHKFAPFSTS 240 (445)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~le~~~~~~~~~~~~--~~~~~vGp~~~~~~~~~~ 240 (445)
.. ...+... ......++.++..+....+. +...++ .++..|..-.......
T Consensus 126 ------------------~~-~~~~~~~-~~~~~~~d~ii~~s~~~~~~-----~~~~~~~~~~~~vi~ngv~~~~~~-- 178 (394)
T 3okp_A 126 ------------------ML-PGSRQSL-RKIGTEVDVLTYISQYTLRR-----FKSAFGSHPTFEHLPSGVDVKRFT-- 178 (394)
T ss_dssp ------------------TS-HHHHHHH-HHHHHHCSEEEESCHHHHHH-----HHHHHCSSSEEEECCCCBCTTTSC--
T ss_pred ------------------hc-chhhHHH-HHHHHhCCEEEEcCHHHHHH-----HHHhcCCCCCeEEecCCcCHHHcC--
Confidence 00 0000000 12235678888888654432 333332 3455555443222110
Q ss_pred CCCcCCCchhchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCchHHHH
Q 013342 241 CNFLNEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLLPEVLA 315 (445)
Q Consensus 241 ~~~~~~~~~l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~ 315 (445)
.........+.+-+. .+++..+++..|+.. ..+....++++++.+ +.+++++ +.+ ...+.+.
T Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g---------~~~~~l~ 245 (394)
T 3okp_A 179 PATPEDKSATRKKLG-FTDTTPVIACNSRLV--PRKGQDSLIKAMPQVIAARPDAQLLIV-GSG---------RYESTLR 245 (394)
T ss_dssp CCCHHHHHHHHHHTT-CCTTCCEEEEESCSC--GGGCHHHHHHHHHHHHHHSTTCEEEEE-CCC---------TTHHHHH
T ss_pred CCCchhhHHHHHhcC-CCcCceEEEEEeccc--cccCHHHHHHHHHHHHhhCCCeEEEEE-cCc---------hHHHHHH
Confidence 000001111222222 234446778888874 334455566665443 3344443 222 1122222
Q ss_pred ---HHhcCCcEEEEeccHHH---HhhccccCceee-----------ccCchhHHHHHhhCCCcccCCcccchhhhHHHHH
Q 013342 316 ---EAVQENGCIVKWAPQKE---VLSHVAVGGFWS-----------HCGWNSTLECLCEGVPMICRPCFGDQRVNARYVS 378 (445)
Q Consensus 316 ---~~~~~n~~~~~~~pq~~---lL~~~~~~~~I~-----------HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~ 378 (445)
....+++.+.+|+|+.+ ++..+++ +|. -|.-+++.||+++|+|+|+.+..+ ....+.
T Consensus 246 ~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i~ 319 (394)
T 3okp_A 246 RLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETVT 319 (394)
T ss_dssp HHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGCC
T ss_pred HHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHHh
Confidence 22357899999998765 7888998 776 455678999999999999976543 333344
Q ss_pred hhheeeeEeCcccCHHHHHHHHHHHhcCC
Q 013342 379 HVWRTGLELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 379 ~~~G~g~~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
+ |.|..++. -+.++++++|.++++|+
T Consensus 320 ~--~~g~~~~~-~d~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 320 P--ATGLVVEG-SDVDKLSELLIELLDDP 345 (394)
T ss_dssp T--TTEEECCT-TCHHHHHHHHHHHHTCH
T ss_pred c--CCceEeCC-CCHHHHHHHHHHHHhCH
Confidence 4 56776664 57899999999999983
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.16 E-value=1.5e-10 Score=112.00 Aligned_cols=129 Identities=13% Similarity=0.148 Sum_probs=85.7
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCchHHHHHHh--cCCcEEEEeccH-
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLLPEVLAEAV--QENGCIVKWAPQ- 330 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~pq- 330 (445)
++++++++.|+..... +.+..++++++++ +.++++..+.+ ....+.+.+.. .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~--------~~~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN--------PNVREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC--------HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC--------HHHHHHHHHHhhcCCCEEEeCCCCHH
Confidence 4567888888765321 3456666666543 23444432111 00112222222 268888777765
Q ss_pred --HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 331 --KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 331 --~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
..+|..+|+ +|+.+| |+++||+++|+|+|+.+..++... +.+. |.|+.++. ++++|+++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS--SHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC--CHHHHHHHHHHHHhC
Confidence 458999999 999885 458899999999999987444332 3453 88888864 899999999999998
No 30
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.15 E-value=8.1e-11 Score=113.57 Aligned_cols=128 Identities=12% Similarity=0.110 Sum_probs=84.7
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCchHHHHHHh--cCCcEEEEeccH-
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLLPEVLAEAV--QENGCIVKWAPQ- 330 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~pq- 330 (445)
++++|+++.|..... +.+..++++++.+ +..+++..+.+ ..+.+.+.+.. .+++.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~--k~~~~ll~a~~~l~~~~~~~~lv~~~g~~--------~~~~~~l~~~~~~~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 197 EGPYVTVTMHRRENW--PLLSDLAQALKRVAEAFPHLTFVYPVHLN--------PVVREAVFPVLKGVRNFVLLDPLEYG 266 (376)
T ss_dssp SSCEEEECCCCGGGG--GGHHHHHHHHHHHHHHCTTSEEEEECCSC--------HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccch--HHHHHHHHHHHHHHhhCCCeEEEEECCCC--------HHHHHHHHHHhccCCCEEEECCCCHH
Confidence 345777777755321 2456677777543 23444433211 01122232221 358888866555
Q ss_pred --HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 331 --KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 331 --~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
..+|..+|+ +|+.+| |.+.||+++|+|+|+.+..+++... .+. |.|+.+. .++++|+++|.++++|
T Consensus 267 ~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~--~d~~~la~~i~~ll~d 334 (376)
T 1v4v_A 267 SMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG--TDPEGVYRVVKGLLEN 334 (376)
T ss_dssp HHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC--SCHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC--CCHHHHHHHHHHHHhC
Confidence 579999999 998873 4566999999999998876666653 453 8887775 3899999999999999
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.13 E-value=4.3e-08 Score=95.17 Aligned_cols=124 Identities=10% Similarity=0.100 Sum_probs=84.7
Q ss_pred eEEEEeccc-ccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCchHHHHHH---hcCCcEEEEeccHH-
Q 013342 262 VIYVSLGSV-ASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLLPEVLAEA---VQENGCIVKWAPQK- 331 (445)
Q Consensus 262 ~v~vs~Gs~-~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~n~~~~~~~pq~- 331 (445)
.+++..|+. . ..+....++++++.+ +.+++ .++.+ .. +.+.+. ..+++.+.+++|+.
T Consensus 209 ~~i~~~G~~~~--~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~~---------~~-~~l~~~~~~~~~~v~~~g~~~~~~ 275 (406)
T 2gek_A 209 RTVLFLGRYDE--PRKGMAVLLAALPKLVARFPDVEIL-IVGRG---------DE-DELREQAGDLAGHLRFLGQVDDAT 275 (406)
T ss_dssp CEEEEESCTTS--GGGCHHHHHHHHHHHHTTSTTCEEE-EESCS---------CH-HHHHHHTGGGGGGEEECCSCCHHH
T ss_pred eEEEEEeeeCc--cccCHHHHHHHHHHHHHHCCCeEEE-EEcCC---------cH-HHHHHHHHhccCcEEEEecCCHHH
Confidence 567778877 4 234455556666543 23333 33322 11 233222 25788999999985
Q ss_pred --HHhhccccCceeec----cCc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHh
Q 013342 332 --EVLSHVAVGGFWSH----CGW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLM 404 (445)
Q Consensus 332 --~lL~~~~~~~~I~H----gG~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll 404 (445)
.+|..+++ +|.- .|+ +++.||+++|+|+|+.+. ......+.+. +.|..++. -+.+++.++|.+++
T Consensus 276 ~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-~d~~~l~~~i~~l~ 347 (406)
T 2gek_A 276 KASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV-DDADGMAAALIGIL 347 (406)
T ss_dssp HHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-CCHHHHHHHHHHHH
Confidence 58899998 6643 343 489999999999999755 5667777773 77877764 57899999999999
Q ss_pred cC
Q 013342 405 VG 406 (445)
Q Consensus 405 ~~ 406 (445)
+|
T Consensus 348 ~~ 349 (406)
T 2gek_A 348 ED 349 (406)
T ss_dssp HC
T ss_pred cC
Confidence 98
No 32
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.13 E-value=4.1e-09 Score=101.22 Aligned_cols=165 Identities=14% Similarity=0.187 Sum_probs=105.0
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCCC----CE-EEEECCCCCCCCCccCCchHHHHHH--hcCCcEEEEeccH-
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSKQ----PF-LWVIRPSSNNAPEGIDLLPEVLAEA--VQENGCIVKWAPQ- 330 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~~-v~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~pq- 330 (445)
++..+++..|+.. ..+....++++++.+.. ++ ++.++.+. ...+. ...+. .++++.+.++..+
T Consensus 194 ~~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~------~~~~~-~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 194 EQQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDK------PRKFE-ALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TTCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC------CHHHH-HHHHHHTCGGGEEEESCCSCH
T ss_pred CCCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCC------HHHHH-HHHHHcCCCCcEEECCCcccH
Confidence 4456778888764 44567778888877642 22 33443321 01111 11122 2478888888654
Q ss_pred HHHhhccccCceee----ccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 331 KEVLSHVAVGGFWS----HCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 331 ~~lL~~~~~~~~I~----HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
..++..+++ +|. -|.-+++.||+++|+|+|+... ..+...+++. +.|..++..-+.++++++|.++++|
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRKALTQ 337 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHHHHHC
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHHHHcC
Confidence 558999998 775 4567789999999999999765 4556778884 8898886335889999999999998
Q ss_pred Cc-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 407 EE-GEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 407 ~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
++ ...+.+++++..+.. .-.+..+.+.++++..
T Consensus 338 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 338 SPLRMAWAENARHYADTQ-----DLYSLPEKAADIITGG 371 (374)
T ss_dssp HHHHHHHHHHHHHHHHHS-----CCSCHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHh
Confidence 31 112333333333322 1145666777777653
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.09 E-value=5.7e-08 Score=97.32 Aligned_cols=134 Identities=13% Similarity=0.175 Sum_probs=87.3
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhCCC----C-EEEEECCCCCCCC-CccCCc-------hHHHHH---H--hcCCc
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNSKQ----P-FLWVIRPSSNNAP-EGIDLL-------PEVLAE---A--VQENG 322 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~v~~~~~~~~~~~-~~~~~~-------~~~~~~---~--~~~n~ 322 (445)
..+++..|+.. ..+....++++++.+.. . .+++++... +. .+.+.+ .+.+.+ . ..+++
T Consensus 262 ~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V 337 (499)
T 2r60_A 262 LPAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIE--NPFEDYSRAGQEEKEILGKIIELIDNNDCRGKV 337 (499)
T ss_dssp SCEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCS--BTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTE
T ss_pred CcEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCC--CcccccccccccchHHHHHHHHHHHhcCCCceE
Confidence 35667788764 45567778888877532 2 345554310 00 000001 122221 1 24789
Q ss_pred EEEEeccHHH---Hhhcc----ccCceeecc---C-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCccc
Q 013342 323 CIVKWAPQKE---VLSHV----AVGGFWSHC---G-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENEL 391 (445)
Q Consensus 323 ~~~~~~pq~~---lL~~~----~~~~~I~Hg---G-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~ 391 (445)
.+.+++|+.+ ++..+ ++ +|.-. | -.+++||+++|+|+|+... ......+... ..|..++. -
T Consensus 338 ~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~-~ 409 (499)
T 2r60_A 338 SMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP-E 409 (499)
T ss_dssp EEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT-T
T ss_pred EECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC-C
Confidence 9999998754 78888 88 76432 3 3589999999999998753 4556666663 67888765 5
Q ss_pred CHHHHHHHHHHHhcC
Q 013342 392 EREVVEKAVRRLMVG 406 (445)
Q Consensus 392 t~~~l~~ai~~ll~~ 406 (445)
+.++++++|.++++|
T Consensus 410 d~~~la~~i~~ll~~ 424 (499)
T 2r60_A 410 DPEDIARGLLKAFES 424 (499)
T ss_dssp CHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHhC
Confidence 789999999999998
No 34
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.07 E-value=2.5e-10 Score=110.91 Aligned_cols=135 Identities=13% Similarity=0.115 Sum_probs=85.7
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCchHHHHHH--hcCCcEEEEeccH
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLLPEVLAEA--VQENGCIVKWAPQ 330 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~pq 330 (445)
+++++++++.+-..... +.+..+++|++++ +.++++..+.+ ..+.+.+.+. ..+++.+.+++++
T Consensus 228 ~~~~~vlv~~hR~~~~~-~~~~~ll~A~~~l~~~~~~~~~v~~~g~~--------~~~~~~l~~~~~~~~~v~~~~~lg~ 298 (396)
T 3dzc_A 228 ASKKLILVTGHRRESFG-GGFERICQALITTAEQHPECQILYPVHLN--------PNVREPVNKLLKGVSNIVLIEPQQY 298 (396)
T ss_dssp TTSEEEEEECSCBCCCT-THHHHHHHHHHHHHHHCTTEEEEEECCBC--------HHHHHHHHHHTTTCTTEEEECCCCH
T ss_pred CCCCEEEEEECCcccch-hHHHHHHHHHHHHHHhCCCceEEEEeCCC--------hHHHHHHHHHHcCCCCEEEeCCCCH
Confidence 34667777653222222 2356777777653 33455443211 0112223222 2368888877754
Q ss_pred ---HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCC
Q 013342 331 ---KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 331 ---~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
..++..+++ +|+-+| |.+.||+++|+|+|+..-..+++. +.+. |.++.+.. ++++|.+++.++++|
T Consensus 299 ~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~~--d~~~l~~ai~~ll~d- 367 (396)
T 3dzc_A 299 LPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVGT--NQQQICDALSLLLTD- 367 (396)
T ss_dssp HHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECTT--CHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcCC--CHHHHHHHHHHHHcC-
Confidence 458899999 999988 666799999999999855555432 3453 87766543 789999999999999
Q ss_pred cHHHHHH
Q 013342 408 EGEEMRQ 414 (445)
Q Consensus 408 ~~~~~~~ 414 (445)
+..++
T Consensus 368 --~~~~~ 372 (396)
T 3dzc_A 368 --PQAYQ 372 (396)
T ss_dssp --HHHHH
T ss_pred --HHHHH
Confidence 54444
No 35
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.06 E-value=8.2e-10 Score=107.48 Aligned_cols=136 Identities=11% Similarity=0.097 Sum_probs=85.8
Q ss_pred CCCceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCchHHHHHH--hcCCcEEEEeccH
Q 013342 258 APESVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLLPEVLAEA--VQENGCIVKWAPQ 330 (445)
Q Consensus 258 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~pq 330 (445)
.++++++++.|...... +.+..++++++++ +.++++...++ ..+.+.+.+. ..+++.+++++++
T Consensus 222 ~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~--------~~~~~~l~~~~~~~~~v~l~~~l~~ 292 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLN--------PAVREKAMAILGGHERIHLIEPLDA 292 (403)
T ss_dssp TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSC--------HHHHHHHHHHHTTCTTEEEECCCCH
T ss_pred cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCC--------HHHHHHHHHHhCCCCCEEEeCCCCH
Confidence 34567777766422111 2346666666542 23455543221 0111222221 2368899998874
Q ss_pred ---HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCC
Q 013342 331 ---KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 331 ---~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~ 407 (445)
..++..+++ +|+-.| |...||..+|+|+|++|-..+++. +.+. |.|+.+.. ++++|.+++.++++|
T Consensus 293 ~~~~~l~~~ad~--vv~~SG-g~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~--d~~~l~~ai~~ll~~- 361 (403)
T 3ot5_A 293 IDFHNFLRKSYL--VFTDSG-GVQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT--NKENLIKEALDLLDN- 361 (403)
T ss_dssp HHHHHHHHHEEE--EEECCH-HHHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS--CHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCE--EEECCc-cHHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC--CHHHHHHHHHHHHcC-
Confidence 458899998 998775 223699999999999976556554 2354 88877753 899999999999999
Q ss_pred cHHHHHHH
Q 013342 408 EGEEMRQR 415 (445)
Q Consensus 408 ~~~~~~~~ 415 (445)
+..+++
T Consensus 362 --~~~~~~ 367 (403)
T 3ot5_A 362 --KESHDK 367 (403)
T ss_dssp --HHHHHH
T ss_pred --HHHHHH
Confidence 554443
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.96 E-value=3.9e-09 Score=101.52 Aligned_cols=131 Identities=9% Similarity=0.048 Sum_probs=83.4
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCccCCchHHHHHHhc--CCcEEEEeccHH--
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ--ENGCIVKWAPQK-- 331 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~n~~~~~~~pq~-- 331 (445)
++++++++.|..... .+.+..++++++++ ..++.+++..+. + ..+.+.+.+... +++.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~-~K~~~~li~a~~~l~~~~~~~~~i~~~g~----~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 276 (375)
T 3beo_A 204 NNRLVLMTAHRRENL-GEPMRNMFRAIKRLVDKHEDVQVVYPVHM----N--PVVRETANDILGDYGRIHLIEPLDVIDF 276 (375)
T ss_dssp TSEEEEEECCCGGGT-THHHHHHHHHHHHHHHHCTTEEEEEECCS----C--HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCeEEEEecccccc-hhHHHHHHHHHHHHHhhCCCeEEEEeCCC----C--HHHHHHHHHHhhccCCEEEeCCCCHHHH
Confidence 456777777765421 14466677777543 112333332221 0 111122222223 688897877764
Q ss_pred -HHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 332 -EVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 332 -~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+|..+++ +|+.+| |++.||+++|+|+|+....+..+ .+.+. |.|..++. ++++|+++|.++++|
T Consensus 277 ~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~-g~g~~v~~--d~~~la~~i~~ll~~ 342 (375)
T 3beo_A 277 HNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEA-GTLKLAGT--DEETIFSLADELLSD 342 (375)
T ss_dssp HHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHT-TSEEECCS--CHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecC-CceEEcCC--CHHHHHHHHHHHHhC
Confidence 58889998 998773 56889999999999985433332 23453 88887763 899999999999998
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.93 E-value=5.8e-08 Score=92.11 Aligned_cols=125 Identities=12% Similarity=0.084 Sum_probs=86.6
Q ss_pred EEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHH---HHhhcccc
Q 013342 263 IYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQK---EVLSHVAV 339 (445)
Q Consensus 263 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~---~lL~~~~~ 339 (445)
+++..|+.. ..+....++++++..+.+++++ +.+. . ...+ +.+.+...+++.+.+|+|+. .++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~----~-~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW----E-PEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC----C-HHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc----c-HHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 456667765 4566778888888887776555 3221 0 1111 12333344899999999986 58889998
Q ss_pred Cceeec-------------cC-chhHHHHHhhCCCcccCCcccchhhhHHHHHh--hheeeeEeCcccCHHHHHHHHHHH
Q 013342 340 GGFWSH-------------CG-WNSTLECLCEGVPMICRPCFGDQRVNARYVSH--VWRTGLELENELEREVVEKAVRRL 403 (445)
Q Consensus 340 ~~~I~H-------------gG-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~--~~G~g~~~~~~~t~~~l~~ai~~l 403 (445)
+|.- -| -+++.||+++|+|+|+... ..+...+++ . +.|..++. +.++++++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~--d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF--APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC--CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC--CHHHHHHHHHHH
Confidence 6632 23 4579999999999999865 446666666 4 56766654 999999999998
Q ss_pred hc
Q 013342 404 MV 405 (445)
Q Consensus 404 l~ 405 (445)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 86
No 38
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.73 E-value=8.1e-07 Score=93.01 Aligned_cols=138 Identities=9% Similarity=0.088 Sum_probs=83.5
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhCC-----CCEEEEECCCCCCCCCccCC--chHHHH---HH--hcCCcEEEE
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNSK-----QPFLWVIRPSSNNAPEGIDL--LPEVLA---EA--VQENGCIVK 326 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~v~~~~~~~~~~~~~~~~--~~~~~~---~~--~~~n~~~~~ 326 (445)
++..+++..|.+. ..+....+++|++++. .+++++ +.+...+....+. ..+.+. +. ..+++.+.+
T Consensus 570 ~~~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIv-G~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG 646 (816)
T 3s28_A 570 KKKPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVV-GGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWIS 646 (816)
T ss_dssp TTSCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEE-CCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEEC
T ss_pred CCCeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEE-eCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEcc
Confidence 3446778888775 4566777888887653 234333 3321000000000 001111 11 247788887
Q ss_pred ----eccHHHHhh----ccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 327 ----WAPQKEVLS----HVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 327 ----~~pq~~lL~----~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
++|+.++.. .+++ +|.- |--.++.||+++|+|+|+. |-......+++. +.|+.++. -+++
T Consensus 647 ~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-~D~e 718 (816)
T 3s28_A 647 SQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-YHGD 718 (816)
T ss_dssp CCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-TSHH
T ss_pred CccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-CCHH
Confidence 455566554 4566 6643 2345899999999999996 455566677774 77888875 5789
Q ss_pred HHHHHHHHHh----cCC
Q 013342 395 VVEKAVRRLM----VGE 407 (445)
Q Consensus 395 ~l~~ai~~ll----~~~ 407 (445)
+++++|.+++ .|+
T Consensus 719 ~LA~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 719 QAADTLADFFTKCKEDP 735 (816)
T ss_dssp HHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhccCH
Confidence 9999997776 773
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.71 E-value=4.6e-08 Score=94.33 Aligned_cols=129 Identities=13% Similarity=0.047 Sum_probs=85.2
Q ss_pred CCceEEEEecccccC-ChhhHHHHHHHHHhC----CCCEEEEECCCCCCCCCccCCchHHHHHH---h--cCCcEEEEec
Q 013342 259 PESVIYVSLGSVASM-DKKEPEEMAWGLVNS----KQPFLWVIRPSSNNAPEGIDLLPEVLAEA---V--QENGCIVKWA 328 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~--~~n~~~~~~~ 328 (445)
+++.++++.|..... ..+.+..+++++.++ +..+|+...+ .+.+.+.+. . .+|+++.+.+
T Consensus 202 ~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p----------~~~~~l~~~~~~~~~~~~v~l~~~l 271 (385)
T 4hwg_A 202 PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHP----------RTKKRLEDLEGFKELGDKIRFLPAF 271 (385)
T ss_dssp TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECH----------HHHHHHHTSGGGGGTGGGEEECCCC
T ss_pred cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECCh----------HHHHHHHHHHHHhcCCCCEEEEcCC
Confidence 356888888865432 235567777877653 4566665421 011112211 1 3577776665
Q ss_pred cH---HHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhc
Q 013342 329 PQ---KEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMV 405 (445)
Q Consensus 329 pq---~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~ 405 (445)
++ ..+|.++++ +||-.|. .+.||...|+|+|+++...+.+. ..++ |.++.+. .++++|.+++.++++
T Consensus 272 g~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~--~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 272 SFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG--FKAERVLQAVKTITE 341 (385)
T ss_dssp CHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC--SSHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC--CCHHHHHHHHHHHHh
Confidence 54 568999998 9998875 46899999999999987554222 2454 8777664 488999999999999
Q ss_pred CC
Q 013342 406 GE 407 (445)
Q Consensus 406 ~~ 407 (445)
|+
T Consensus 342 d~ 343 (385)
T 4hwg_A 342 EH 343 (385)
T ss_dssp TC
T ss_pred Ch
Confidence 84
No 40
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.70 E-value=5.4e-07 Score=87.85 Aligned_cols=78 Identities=13% Similarity=0.041 Sum_probs=61.9
Q ss_pred cCCcEEEEecc---H---HHHhhccccCceeecc----CchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeC
Q 013342 319 QENGCIVKWAP---Q---KEVLSHVAVGGFWSHC----GWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELE 388 (445)
Q Consensus 319 ~~n~~~~~~~p---q---~~lL~~~~~~~~I~Hg----G~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 388 (445)
.+++.+.+|++ + ..++..+++ +|.-. .-.++.||+++|+|+|+.+. ..+...+++. +.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 47899999876 3 347888998 77654 45689999999999999764 4566677773 7787775
Q ss_pred cccCHHHHHHHHHHHhcC
Q 013342 389 NELEREVVEKAVRRLMVG 406 (445)
Q Consensus 389 ~~~t~~~l~~ai~~ll~~ 406 (445)
+.++++++|.++++|
T Consensus 365 ---d~~~la~~i~~ll~~ 379 (416)
T 2x6q_A 365 ---DANEAVEVVLYLLKH 379 (416)
T ss_dssp ---SHHHHHHHHHHHHHC
T ss_pred ---CHHHHHHHHHHHHhC
Confidence 889999999999998
No 41
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.59 E-value=2.6e-07 Score=78.77 Aligned_cols=140 Identities=12% Similarity=0.108 Sum_probs=94.0
Q ss_pred eEEEEecccccCChhhHHHHHHHHHhCC-CCEEEEECCCCCCCCCccCCchHHH---HHHhcCCcEEEEeccH---HHHh
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVNSK-QPFLWVIRPSSNNAPEGIDLLPEVL---AEAVQENGCIVKWAPQ---KEVL 334 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~pq---~~lL 334 (445)
.+++..|+.. ..+....+++++++.+ .+++++- .+.. ...+.+-. ....++|+.+.+|+|+ ..++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G-~~~~-----~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVG-WFSK-----GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEB-CCCT-----TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEe-cCcc-----HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH
Confidence 4556778765 4556778888988874 4555543 3211 11222211 1134579999999998 4588
Q ss_pred hccccCceee---ccCch-hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcHH
Q 013342 335 SHVAVGGFWS---HCGWN-STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEGE 410 (445)
Q Consensus 335 ~~~~~~~~I~---HgG~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~ 410 (445)
..+++ +|. +.|+| +++||+++|+|+|+.. ...+...+++. +.|..+ . -+.++++++|.++++|++
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~-~d~~~l~~~i~~l~~~~~-- 164 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N-ADVNEIIDAMKKVSKNPD-- 164 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C-SCHHHHHHHHHHHHHCTT--
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C-CCHHHHHHHHHHHHhCHH--
Confidence 89998 775 33444 9999999999999874 35666677763 677777 3 588999999999998842
Q ss_pred HHHHHHHHHH
Q 013342 411 EMRQRAKNLK 420 (445)
Q Consensus 411 ~~~~~a~~l~ 420 (445)
.+++++++.+
T Consensus 165 ~~~~~~~~~a 174 (177)
T 2f9f_A 165 KFKKDCFRRA 174 (177)
T ss_dssp TTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 2355555443
No 42
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.52 E-value=1.5e-05 Score=77.42 Aligned_cols=132 Identities=11% Similarity=0.065 Sum_probs=80.1
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhC-----CCCEEEEECCCCCCCCCccCCchHHHHH---H--hcCC-------c
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNS-----KQPFLWVIRPSSNNAPEGIDLLPEVLAE---A--VQEN-------G 322 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~---~--~~~n-------~ 322 (445)
+..+++..|... ..+....+++|++.+ +.+++++-.+..... ..+.+.+.+ . ..++ +
T Consensus 183 ~~~~il~vGr~~--~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~----~~l~~~~~~~~~~~~l~~~v~~l~~vv 256 (413)
T 3oy2_A 183 DDVLFLNMNRNT--ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESK----FDLHSIALRELVASGVDNVFTHLNKIM 256 (413)
T ss_dssp TSEEEECCSCSS--GGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCS----CCHHHHHHHHHHHHTCSCHHHHHTTEE
T ss_pred CceEEEEcCCCc--hhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccch----hhHHHHHHHHHHHcCccccccccccee
Confidence 457778888864 345566666666553 456655543321110 011122221 1 2232 5
Q ss_pred EEEEeccHHH---HhhccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhhee------------
Q 013342 323 CIVKWAPQKE---VLSHVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRT------------ 383 (445)
Q Consensus 323 ~~~~~~pq~~---lL~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~------------ 383 (445)
.+.+|+|+.+ ++..+++ +|.- |.-.++.||+++|+|+|+... ......+.+. ..
T Consensus 257 ~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 257 INRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGD-CVYKIKPSAWISVD 329 (413)
T ss_dssp EECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTT-TSEEECCCEEEECT
T ss_pred eccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccC-cccccccccccccc
Confidence 5569999654 7888998 6642 234489999999999998643 3455555442 22
Q ss_pred ---ee--EeCcccCHHHHHHHHHHHhcC
Q 013342 384 ---GL--ELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 384 ---g~--~~~~~~t~~~l~~ai~~ll~~ 406 (445)
|. .+.. -+.++++++| ++++|
T Consensus 330 ~~~G~~gl~~~-~d~~~la~~i-~l~~~ 355 (413)
T 3oy2_A 330 DRDGIGGIEGI-IDVDDLVEAF-TFFKD 355 (413)
T ss_dssp TTCSSCCEEEE-CCHHHHHHHH-HHTTS
T ss_pred cccCcceeeCC-CCHHHHHHHH-HHhcC
Confidence 54 5543 4899999999 99998
No 43
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.38 E-value=3.5e-06 Score=83.80 Aligned_cols=127 Identities=13% Similarity=0.040 Sum_probs=80.5
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCccCCchHHH---HHHhcCCcE-EEEeccHH--
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEGIDLLPEVL---AEAVQENGC-IVKWAPQK-- 331 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~n~~-~~~~~pq~-- 331 (445)
..+++..|++. ..+....++++++.+ +.+++++-.+. ....+.+ .+..++++. +.++ +.+
T Consensus 291 ~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~--------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~ 359 (485)
T 1rzu_A 291 SPLFCVISRLT--WQKGIDLMAEAVDEIVSLGGRLVVLGAGD--------VALEGALLAAASRHHGRVGVAIGY-NEPLS 359 (485)
T ss_dssp SCEEEEESCBS--TTTTHHHHHTTHHHHHHTTCEEEEEECBC--------HHHHHHHHHHHHHTTTTEEEEESC-CHHHH
T ss_pred CeEEEEEccCc--cccCHHHHHHHHHHHHhcCceEEEEeCCc--------hHHHHHHHHHHHhCCCcEEEecCC-CHHHH
Confidence 34778888875 344455555555443 45555543111 0011222 223346787 5677 543
Q ss_pred -HHhhccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhh---------eeeeEeCcccCHHHHH
Q 013342 332 -EVLSHVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVW---------RTGLELENELEREVVE 397 (445)
Q Consensus 332 -~lL~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~g~~~~~~~t~~~l~ 397 (445)
.++..+++ +|.- |--.+++||+++|+|+|+... ..+...+++ - +.|..++. -++++|+
T Consensus 360 ~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la 431 (485)
T 1rzu_A 360 HLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-VTLDGLK 431 (485)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-CSHHHHH
T ss_pred HHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-CCHHHHH
Confidence 47889998 7742 334589999999999999754 345555554 3 47777764 5789999
Q ss_pred HHHHHHh---cC
Q 013342 398 KAVRRLM---VG 406 (445)
Q Consensus 398 ~ai~~ll---~~ 406 (445)
++|.+++ +|
T Consensus 432 ~~i~~ll~~~~~ 443 (485)
T 1rzu_A 432 QAIRRTVRYYHD 443 (485)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhCC
Confidence 9999999 67
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.92 E-value=0.00032 Score=68.00 Aligned_cols=75 Identities=11% Similarity=0.022 Sum_probs=58.6
Q ss_pred cCCcEEEEeccHHH---HhhccccCceee---ccC-chhHHHHH-------hhCCCcccCCcccchhhhHHHHHhhheee
Q 013342 319 QENGCIVKWAPQKE---VLSHVAVGGFWS---HCG-WNSTLECL-------CEGVPMICRPCFGDQRVNARYVSHVWRTG 384 (445)
Q Consensus 319 ~~n~~~~~~~pq~~---lL~~~~~~~~I~---HgG-~gsv~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~~G~g 384 (445)
.+|+.+.+++|+.+ ++..+|+ +|. .-| -+++.||+ ++|+|+|+... +... ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 57889999999755 7888998 663 234 35688999 99999999755 6663 667
Q ss_pred eE-eCcccCHHHHHHHHHHHhcCC
Q 013342 385 LE-LENELEREVVEKAVRRLMVGE 407 (445)
Q Consensus 385 ~~-~~~~~t~~~l~~ai~~ll~~~ 407 (445)
.. ++. -++++|+++|.++++|+
T Consensus 331 ~l~v~~-~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYTP-GNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEECT-TCHHHHHHHHHHHHHCC
T ss_pred EEEeCC-CCHHHHHHHHHHHHhCc
Confidence 76 654 57899999999999984
No 45
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.88 E-value=9e-05 Score=61.84 Aligned_cols=126 Identities=11% Similarity=0.187 Sum_probs=78.3
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhCCC--CEEEEECCCCCCCCCccCCchHHH---HHHhcCCcEEEEeccHHH---
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNSKQ--PFLWVIRPSSNNAPEGIDLLPEVL---AEAVQENGCIVKWAPQKE--- 332 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~pq~~--- 332 (445)
+++++..|++. ..+....++++++.+.. ++-+.+-++ +...+.+ .+....++.+ +|+|+.+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~--------g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGK--------GPDEKKIKLLAQKLGVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECC--------STTHHHHHHHHHHHTCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeC--------CccHHHHHHHHHHcCCeEEE-eecCHHHHHH
Confidence 56778888875 45667788888887642 333333222 1112222 2223346777 9999754
Q ss_pred HhhccccCceeec----cCchhHHHHHhhCC-CcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 333 VLSHVAVGGFWSH----CGWNSTLECLCEGV-PMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 333 lL~~~~~~~~I~H----gG~gsv~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
++..+++ +|.- |.-.++.||+++|+ |+|+....+ .....+... +. .+. .-+.+++.++|.++++|
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~-~~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFE-PNNAKDLSAKIDWWLEN 140 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EEC-TTCHHHHHHHHHHHHHC
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEc-CCCHHHHHHHHHHHHhC
Confidence 7888998 7752 33459999999996 999943211 122223332 33 222 35889999999999998
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.86 E-value=0.0019 Score=61.72 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=71.3
Q ss_pred CcEEEEeccH-HHHhhccccCceeec-----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHH
Q 013342 321 NGCIVKWAPQ-KEVLSHVAVGGFWSH-----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELERE 394 (445)
Q Consensus 321 n~~~~~~~pq-~~lL~~~~~~~~I~H-----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~ 394 (445)
++++.++... ..++..+|+ ++.- +|..+++||+++|+|+|+-|...+.......+.+. |.++... +++
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~---d~~ 334 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK---NET 334 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC---SHH
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC---CHH
Confidence 3455554443 558999998 5542 23478999999999999888777777777777674 8877663 679
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 013342 395 VVEKAVRRLMVGEEGEEMRQRAKNLKEEIE 424 (445)
Q Consensus 395 ~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~ 424 (445)
+|+++|.++++|+.-..+.+++++..+.-.
T Consensus 335 ~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 335 ELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 999999999987223567788877665543
No 47
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.84 E-value=0.00062 Score=68.91 Aligned_cols=82 Identities=12% Similarity=0.103 Sum_probs=60.2
Q ss_pred CCcEEEEeccHH---HHhhccccCceee---ccCchhHHHHHhhCCCcccCCcccchh-hhHHHHHhhheeeeEeCcccC
Q 013342 320 ENGCIVKWAPQK---EVLSHVAVGGFWS---HCGWNSTLECLCEGVPMICRPCFGDQR-VNARYVSHVWRTGLELENELE 392 (445)
Q Consensus 320 ~n~~~~~~~pq~---~lL~~~~~~~~I~---HgG~gsv~eal~~GvP~v~~P~~~DQ~-~na~~v~~~~G~g~~~~~~~t 392 (445)
+++.+.+++|+. .++..+|+ +|. .|+-.+++||+++|+|+|++|-..=.- .-+..+.. .|+.-.+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC--C
Confidence 789999999864 47888998 762 255668999999999999977531111 12345556 476655543 8
Q ss_pred HHHHHHHHHHHhcC
Q 013342 393 REVVEKAVRRLMVG 406 (445)
Q Consensus 393 ~~~l~~ai~~ll~~ 406 (445)
++++.+++.++++|
T Consensus 509 ~~~la~~i~~l~~~ 522 (568)
T 2vsy_A 509 DAAFVAKAVALASD 522 (568)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999999999
No 48
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.79 E-value=0.00029 Score=60.64 Aligned_cols=77 Identities=14% Similarity=0.138 Sum_probs=59.9
Q ss_pred CcEE-EEeccHH---HHhhccccCceeecc---C-chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccC
Q 013342 321 NGCI-VKWAPQK---EVLSHVAVGGFWSHC---G-WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELE 392 (445)
Q Consensus 321 n~~~-~~~~pq~---~lL~~~~~~~~I~Hg---G-~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t 392 (445)
++.+ .+++++. .++..+++ +|.-. | -.++.||+++|+|+|+... ..+...+ .. +.|..++. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~-~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-TC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-CC
Confidence 8899 8999864 47888998 77533 2 4688999999999988754 3555566 53 67777764 57
Q ss_pred HHHHHHHHHHHhc-C
Q 013342 393 REVVEKAVRRLMV-G 406 (445)
Q Consensus 393 ~~~l~~ai~~ll~-~ 406 (445)
.+++.++|.++++ |
T Consensus 167 ~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 167 PGELANAILKALELS 181 (200)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcC
Confidence 8999999999999 8
No 49
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.68 E-value=0.0003 Score=70.56 Aligned_cols=138 Identities=10% Similarity=0.047 Sum_probs=91.5
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEE--CCCCCCCCCccCCchHHH-HHHhcCCcEEEEeccHHH---H
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVI--RPSSNNAPEGIDLLPEVL-AEAVQENGCIVKWAPQKE---V 333 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~pq~~---l 333 (445)
..++|.||++.....++.++...+.+++.+..++|.. +.+ .+. ...+-..+ .....+++.+.+.+|..+ .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~--~g~--~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS--NGI--THPYVERFIKSYLGDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC--CGG--GHHHHHHHHHHHHGGGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC--chh--hHHHHHHHHHcCCCccEEEcCCCCHHHHHHH
Confidence 3689999999888899999999999999888777743 211 010 00011111 122446888889998766 4
Q ss_pred hhccccCceeec---cCchhHHHHHhhCCCcccCCcccch-hhhHHHHHhhheeee-EeCcccCHHHHHHHHHHHhcC
Q 013342 334 LSHVAVGGFWSH---CGWNSTLECLCEGVPMICRPCFGDQ-RVNARYVSHVWRTGL-ELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 334 L~~~~~~~~I~H---gG~gsv~eal~~GvP~v~~P~~~DQ-~~na~~v~~~~G~g~-~~~~~~t~~~l~~ai~~ll~~ 406 (445)
+..+|+ ++.- +|..|+.|||++|||+|+.+-..=- ..-+..+.. .|+.- .+ .-+.++..+...++.+|
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LI--A~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLI--ANTVDEYVERAVRLAEN 588 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGE--ESSHHHHHHHHHHHHHC
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCccee--cCCHHHHHHHHHHHhCC
Confidence 478887 6543 7789999999999999998753211 112233344 46653 12 23678888888889999
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.66 E-value=0.0017 Score=67.56 Aligned_cols=137 Identities=18% Similarity=0.206 Sum_probs=96.6
Q ss_pred CCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHH------hcCCcEEEEeccH
Q 013342 257 QAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEA------VQENGCIVKWAPQ 330 (445)
Q Consensus 257 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~n~~~~~~~pq 330 (445)
-+++.++|.||-+....+++.+..-++.|++.+.-++|...... ....++.+. .++++++.+..|.
T Consensus 519 Lp~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~--------~~~~~l~~~~~~~gi~~~r~~f~~~~~~ 590 (723)
T 4gyw_A 519 LPEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA--------VGEPNIQQYAQNMGLPQNRIIFSPVAPK 590 (723)
T ss_dssp CCTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG--------GGHHHHHHHHHHTTCCGGGEEEEECCCH
T ss_pred CCCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH--------HHHHHHHHHHHhcCCCcCeEEECCCCCH
Confidence 35667999999999889999999999999999998888875431 112233221 2477888899887
Q ss_pred HH---HhhccccCceee---ccCchhHHHHHhhCCCcccCCccc-chhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHH
Q 013342 331 KE---VLSHVAVGGFWS---HCGWNSTLECLCEGVPMICRPCFG-DQRVNARYVSHVWRTGLELENELEREVVEKAVRRL 403 (445)
Q Consensus 331 ~~---lL~~~~~~~~I~---HgG~gsv~eal~~GvP~v~~P~~~-DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~l 403 (445)
.+ .+..+|+ ++. .+|..|+.|||+.|||+|.++-.. =-..-+..+.. +|+.-.+- -|.++-.+...++
T Consensus 591 ~~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia--~~~~~Y~~~a~~l 665 (723)
T 4gyw_A 591 EEHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA--KNRQEYEDIAVKL 665 (723)
T ss_dssp HHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC--SSHHHHHHHHHHH
T ss_pred HHHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc--CCHHHHHHHHHHH
Confidence 66 4456776 665 789999999999999999999422 22333444555 57664443 4556665555577
Q ss_pred hcC
Q 013342 404 MVG 406 (445)
Q Consensus 404 l~~ 406 (445)
-+|
T Consensus 666 a~d 668 (723)
T 4gyw_A 666 GTD 668 (723)
T ss_dssp HHC
T ss_pred hcC
Confidence 778
No 51
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.41 E-value=0.00014 Score=68.56 Aligned_cols=111 Identities=15% Similarity=0.182 Sum_probs=80.1
Q ss_pred CcEEEEeccHHHH---hhccccCceeeccC---------chhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeC
Q 013342 321 NGCIVKWAPQKEV---LSHVAVGGFWSHCG---------WNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELE 388 (445)
Q Consensus 321 n~~~~~~~pq~~l---L~~~~~~~~I~HgG---------~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 388 (445)
|+.+.+|+|+.++ |..++.+++.+-+. -+-+.|++++|+|+|+. +...++..+++. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhC-CeEEEeC
Confidence 8899999999885 54556644442222 24578999999999975 456788899995 9999886
Q ss_pred cccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 389 NELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 389 ~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+.+++.+++.++..+ +...|++|+++.+++++.. --.++++.+.+.++
T Consensus 290 ---~~~e~~~~i~~l~~~-~~~~m~~na~~~a~~~~~~----~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNED-EYIELVKNVRSFNPILRKG----FFTRRLLTESVFQA 337 (339)
T ss_dssp ---SHHHHHHHHHHCCHH-HHHHHHHHHHHHTHHHHTT----HHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhcc----HHHHHHHHHHHHHh
Confidence 468888899876543 3467889999988888763 44555665555443
No 52
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.11 E-value=0.0026 Score=62.84 Aligned_cols=128 Identities=14% Similarity=0.087 Sum_probs=80.8
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCccCCchHHH---HHHhcCCcE-EEEeccHH-
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEGIDLLPEVL---AEAVQENGC-IVKWAPQK- 331 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~n~~-~~~~~pq~- 331 (445)
+..+++..|.+. ..+....+++|++.+ +.+++++-.+. ....+.+ .+...+++. +.++ +.+
T Consensus 291 ~~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~--------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~ 359 (485)
T 2qzs_A 291 KVPLFAVVSRLT--SQKGLDLVLEALPGLLEQGGQLALLGAGD--------PVLQEGFLAAAAEYPGQVGVQIGY-HEAF 359 (485)
T ss_dssp TSCEEEEEEEES--GGGCHHHHHHHHHHHHHTTCEEEEEEEEC--------HHHHHHHHHHHHHSTTTEEEEESC-CHHH
T ss_pred CCeEEEEeccCc--cccCHHHHHHHHHHHhhCCcEEEEEeCCc--------hHHHHHHHHHHHhCCCcEEEeCCC-CHHH
Confidence 446667778775 344556666666543 45555443111 0011222 223346775 6677 543
Q ss_pred --HHhhccccCceeec----cCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhh---------eeeeEeCcccCHHHH
Q 013342 332 --EVLSHVAVGGFWSH----CGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVW---------RTGLELENELEREVV 396 (445)
Q Consensus 332 --~lL~~~~~~~~I~H----gG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~g~~~~~~~t~~~l 396 (445)
.++..+++ +|.- |.-.+++||+++|+|+|+... ..+...+.. - +.|..++. -+++++
T Consensus 360 ~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~l 431 (485)
T 2qzs_A 360 SHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-SNAWSL 431 (485)
T ss_dssp HHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-SSHHHH
T ss_pred HHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-CCHHHH
Confidence 57899998 7643 234578899999999999854 345555554 2 47777764 578999
Q ss_pred HHHHHHHh---cC
Q 013342 397 EKAVRRLM---VG 406 (445)
Q Consensus 397 ~~ai~~ll---~~ 406 (445)
+++|.+++ +|
T Consensus 432 a~~i~~ll~~~~~ 444 (485)
T 2qzs_A 432 LRAIRRAFVLWSR 444 (485)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCC
Confidence 99999999 67
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.24 E-value=0.088 Score=49.48 Aligned_cols=101 Identities=11% Similarity=-0.023 Sum_probs=68.3
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCce-EEEcCCCCCCCCCCCChhHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN--GFSITVVHTHFNPPNPSNHPEFN-FQSIPDGLTADDVSTGINILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (445)
|+++-..+.|++.-+.++.+.|+++ +.+|++++.+.........+.++ ++.++.. .. .. .+.
T Consensus 11 iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~--------~~--~~--~~~--- 75 (349)
T 3tov_A 11 IVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKK--------GR--HN--SIS--- 75 (349)
T ss_dssp EEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCS--------SH--HH--HHH---
T ss_pred EEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcc--------cc--cc--cHH---
Confidence 5788889999999999999999987 99999999876665555556664 5555521 00 00 110
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCc-eEEEEcCCCCchHHHHHHhCCceEE
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQI-ACIIYDEIFYFPEAAANQLNLQSII 127 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~-D~vv~D~~~~~~~~~A~~~giP~v~ 127 (445)
.+..++..+.+. ++ |++|.-....-...++...|+|...
T Consensus 76 --~~~~l~~~Lr~~---------~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 --GLNEVAREINAK---------GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --HHHHHHHHHHHH---------CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --HHHHHHHHHhhC---------CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 111234444432 89 9999765555556678888999765
No 54
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.08 E-value=0.0014 Score=63.60 Aligned_cols=80 Identities=15% Similarity=0.062 Sum_probs=58.4
Q ss_pred cCCcEEEEeccHHH---HhhccccCceeecc---Cc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCccc
Q 013342 319 QENGCIVKWAPQKE---VLSHVAVGGFWSHC---GW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENEL 391 (445)
Q Consensus 319 ~~n~~~~~~~pq~~---lL~~~~~~~~I~Hg---G~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~ 391 (445)
.+++.+.+++|+.+ ++..+++ +|.-+ |. .+++||+++|+|+|+ -..+ ....++.. ..|+.++. -
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-~ 364 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-L 364 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-C
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-C
Confidence 35778899998765 7888998 77422 44 367999999999998 3222 12344553 56777764 5
Q ss_pred CHHHHHHHHHHHhcCC
Q 013342 392 EREVVEKAVRRLMVGE 407 (445)
Q Consensus 392 t~~~l~~ai~~ll~~~ 407 (445)
++++|+++|.++++|+
T Consensus 365 d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 365 NPENIAETLVELCMSF 380 (413)
T ss_dssp SHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCH
Confidence 8899999999999984
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.54 E-value=0.053 Score=54.23 Aligned_cols=133 Identities=14% Similarity=0.146 Sum_probs=81.2
Q ss_pred CCceEEEEecccccCChhhHHHHHHHHHhC---CCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHH---
Q 013342 259 PESVIYVSLGSVASMDKKEPEEMAWGLVNS---KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKE--- 332 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~--- 332 (445)
++.++++..|.+. ..+.+..+++|+.++ +.++++...++ ......-.......+.++.+....+...
T Consensus 325 ~~~p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 397 (536)
T 3vue_A 325 RKIPLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGK-----KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHL 397 (536)
T ss_dssp TTSCEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBC-----HHHHHHHHHHHHHSTTTEEEECSCCHHHHHH
T ss_pred CCCcEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccC-----chHHHHHHHHHhhcCCceEEEEeccHHHHHH
Confidence 3445667778765 455667777777653 44555543221 0000011122334567888887777643
Q ss_pred HhhccccCceeecc---Cch-hHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCc---------ccCHHHHHHH
Q 013342 333 VLSHVAVGGFWSHC---GWN-STLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN---------ELEREVVEKA 399 (445)
Q Consensus 333 lL~~~~~~~~I~Hg---G~g-sv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~---------~~t~~~l~~a 399 (445)
++..+++ +|.-. |+| +++||+++|+|+|+-.. ......|.+. ..|..... ..++++|+++
T Consensus 398 ~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~a 470 (536)
T 3vue_A 398 IMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAAT 470 (536)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHH
T ss_pred HHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHH
Confidence 7888888 77532 333 88999999999998744 4556666663 44543221 2467899999
Q ss_pred HHHHhc
Q 013342 400 VRRLMV 405 (445)
Q Consensus 400 i~~ll~ 405 (445)
|++++.
T Consensus 471 i~ral~ 476 (536)
T 3vue_A 471 LKRAIK 476 (536)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.44 E-value=0.87 Score=42.27 Aligned_cols=101 Identities=13% Similarity=0.073 Sum_probs=61.0
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCc-eEEEcCCCCCCCCCCCChhHHHHHHHHHhc
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSN--GFSITVVHTHFNPPNPSNHPEF-NFQSIPDGLTADDVSTGINILITNLLNVNC 77 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (445)
|+++.....|++.-+.++.++|+++ +.+|++++.+.........+.+ +++.++.. .. . . .+
T Consensus 3 ILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~--~~------~--~--~~---- 66 (348)
T 1psw_A 3 ILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--HG------A--L--EI---- 66 (348)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-------------------CH----
T ss_pred EEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCC--cc------c--c--ch----
Confidence 5778888889999999999999987 9999999986443333334445 34444311 00 0 0 00
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEE
Q 013342 78 QAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSII 127 (445)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~ 127 (445)
..+.++...+.+ . +||++|.-....-...++...|+|...
T Consensus 67 -~~~~~l~~~l~~--------~-~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 67 -GERRKLGHSLRE--------K-RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -HHHHHHHHHTTT--------T-TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -HHHHHHHHHHHh--------c-CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 111223444432 2 899999332334455678888999844
No 57
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=95.43 E-value=0.18 Score=49.54 Aligned_cols=106 Identities=14% Similarity=0.073 Sum_probs=67.3
Q ss_pred cEE-EEeccHHH---HhhccccCceeec---cCch-hHHHHHhhCC-----CcccCCcccchhhhHHHHHhhheeeeEeC
Q 013342 322 GCI-VKWAPQKE---VLSHVAVGGFWSH---CGWN-STLECLCEGV-----PMICRPCFGDQRVNARYVSHVWRTGLELE 388 (445)
Q Consensus 322 ~~~-~~~~pq~~---lL~~~~~~~~I~H---gG~g-sv~eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 388 (445)
+.+ .+++++.+ ++..+|+ +|.- =|+| ++.|++++|+ |+|+--..+--. .+ .-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~----~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN----EL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG----TC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHH----Hh----CCeEEEC
Confidence 443 47888765 7778888 6642 3565 7899999998 666544332111 11 1345565
Q ss_pred cccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 389 NELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 389 ~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
+ -+.++++++|.++|+++. +.-++..+++.+.+++. +..+.++++++.+
T Consensus 403 p-~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~~-----s~~~~a~~~l~~l 451 (482)
T 1uqt_A 403 P-YDRDEVAAALDRALTMSL-AERISRHAEMLDVIVKN-----DINHWQECFISDL 451 (482)
T ss_dssp T-TCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHHT-----CHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHH
Confidence 4 578999999999998632 22344455555555554 6777777777653
No 58
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=94.10 E-value=0.63 Score=45.65 Aligned_cols=108 Identities=10% Similarity=0.025 Sum_probs=72.3
Q ss_pred CcEEEEeccHHH---HhhccccCceee---ccCchh-HHHHHhhC---CCcccCCcccchhhhHHHHHhhheeeeEeCcc
Q 013342 321 NGCIVKWAPQKE---VLSHVAVGGFWS---HCGWNS-TLECLCEG---VPMICRPCFGDQRVNARYVSHVWRTGLELENE 390 (445)
Q Consensus 321 n~~~~~~~pq~~---lL~~~~~~~~I~---HgG~gs-v~eal~~G---vP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~ 390 (445)
.+++...+|+.+ ++..+++ ++. .=|+|. ..|++++| .|+|+--+.+ .+..+.. -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECC-
Confidence 577778888755 6777888 553 358885 58999996 5555443322 2333322 3677776
Q ss_pred cCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHh
Q 013342 391 LEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEFI 444 (445)
Q Consensus 391 ~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 444 (445)
-+.+++++||.++|+++. +.-+++.+++.+.+++. +..+-++.|+++|
T Consensus 423 ~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~~-----d~~~W~~~fl~~L 470 (496)
T 3t5t_A 423 FDLVEQAEAISAALAAGP-RQRAEAAARRRDAARPW-----TLEAWVQAQLDGL 470 (496)
T ss_dssp TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTTC-----BHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHH
Confidence 588999999999998743 34555666666666654 7777788877765
No 59
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=86.68 E-value=2.4 Score=43.14 Aligned_cols=73 Identities=15% Similarity=0.190 Sum_probs=44.4
Q ss_pred EeccH---------HHHhhccccCceeecc---Cc-hhHHHHHhhCCCcccCCcccchhhhHHHHHhh------heeeeE
Q 013342 326 KWAPQ---------KEVLSHVAVGGFWSHC---GW-NSTLECLCEGVPMICRPCFGDQRVNARYVSHV------WRTGLE 386 (445)
Q Consensus 326 ~~~pq---------~~lL~~~~~~~~I~Hg---G~-gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~------~G~g~~ 386 (445)
.|++. .+++..+++ ||.-+ |+ .+++||+++|+|+|+.-.. .....|.+. -+.|+.
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g----G~~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS----GFGSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB----HHHHHHHTTSCHHHHHHTTEE
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC----ChhhhhhccccccCCCCceEE
Confidence 77766 458999998 77543 44 4899999999999987543 333333320 134655
Q ss_pred eCc--ccCHHHHHHHHHHHh
Q 013342 387 LEN--ELEREVVEKAVRRLM 404 (445)
Q Consensus 387 ~~~--~~t~~~l~~ai~~ll 404 (445)
+.. ..+++++.+++.+.|
T Consensus 573 V~~rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 573 IVDRRFKAPDESVEQLVDYM 592 (725)
T ss_dssp EECCSSSCHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHH
Confidence 522 345555555555444
No 60
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=75.40 E-value=13 Score=31.93 Aligned_cols=150 Identities=12% Similarity=0.025 Sum_probs=83.4
Q ss_pred hhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhc-CCcEEEEeccHH
Q 013342 253 WLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ-ENGCIVKWAPQK 331 (445)
Q Consensus 253 wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~~pq~ 331 (445)
|++ -.+++++.|..|.+. ..-+..|.+.+..+.++... +.+.+.+... .++.++..--+.
T Consensus 26 fl~-L~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----------~~~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLD-LKGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----------VSAEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EEC-CTTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----------CCHHHHHHHHTTSCEEECSCCCG
T ss_pred EEE-cCCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----------CCHHHHHHHHcCCcEEEECCCCH
Confidence 555 456778989888554 55667777778887766421 2233332222 345544322234
Q ss_pred HHhhccccCceeeccCchhHHHHHhhCCCcccCCc-ccchhhhH-----HHHHhhheeeeEeCc----ccCHHHHHHHHH
Q 013342 332 EVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPC-FGDQRVNA-----RYVSHVWRTGLELEN----ELEREVVEKAVR 401 (445)
Q Consensus 332 ~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~-~~DQ~~na-----~~v~~~~G~g~~~~~----~~t~~~l~~ai~ 401 (445)
+-|..+++ +|.--|.-.+++.++.-.- ..+|+ ..|.+..+ ..+.+. ++-+.+.. ..-+..|++.|.
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie 162 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLS 162 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHH
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHH
Confidence 55777887 8888887766666554222 23332 23554433 223332 33333322 234567888887
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 402 RLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 402 ~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
+.+.. +...+.+.+.++++++++.
T Consensus 163 ~~lp~-~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 163 SNYDE-SYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHSCT-HHHHHHHHHHHHHHHHHHC
T ss_pred HHccH-HHHHHHHHHHHHHHHHHHH
Confidence 77753 2356788888888888875
No 61
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=67.86 E-value=20 Score=29.53 Aligned_cols=131 Identities=11% Similarity=0.065 Sum_probs=69.9
Q ss_pred hchhhccCCCCceEEEEecc-cccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEec
Q 013342 250 CISWLNNQAPESVIYVSLGS-VASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWA 328 (445)
Q Consensus 250 l~~wl~~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 328 (445)
+-++|.. ++...||-|. .. .+....++..+.+-+++-++... . .+.+.. .-+..++++..
T Consensus 37 lg~~La~---~g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~---~----~~~~~~----~~~~~i~~~~~ 97 (176)
T 2iz6_A 37 LGKQIAT---HGWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP---D----TSEISD----AVDIPIVTGLG 97 (176)
T ss_dssp HHHHHHH---TTCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------------CCT----TCSEEEECCCC
T ss_pred HHHHHHH---CCCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch---h----hhhhcc----CCceeEEcCCH
Confidence 4455653 2466677765 33 67777777777777776666321 0 001100 00123345666
Q ss_pred cHHH-Hhh-ccccCceeeccCchhHHHH---HhhCCCcccCCcccchhhhHHHHHhhheee-eEeCcccCHHHHHHHHHH
Q 013342 329 PQKE-VLS-HVAVGGFWSHCGWNSTLEC---LCEGVPMICRPCFGDQRVNARYVSHVWRTG-LELENELEREVVEKAVRR 402 (445)
Q Consensus 329 pq~~-lL~-~~~~~~~I~HgG~gsv~ea---l~~GvP~v~~P~~~DQ~~na~~v~~~~G~g-~~~~~~~t~~~l~~ai~~ 402 (445)
+... ++. .++. .++--||.||.-|+ +.+++|++++|.+ + .....+... ... +.+ .-|++++.+.+.+
T Consensus 98 ~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~-~--~~~gfi~~~-~~~~i~~--~~~~~e~~~~l~~ 170 (176)
T 2iz6_A 98 SARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQ-P--EAEKFFTSL-DAGLVHV--AADVAGAIAAVKQ 170 (176)
T ss_dssp SSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCC-H--HHHHHHHHH-CTTTEEE--ESSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCc-c--cccccCChh-hcCeEEE--cCCHHHHHHHHHH
Confidence 6533 333 3443 56667899986655 7799999999983 2 111122221 111 111 3477888777776
Q ss_pred HhcC
Q 013342 403 LMVG 406 (445)
Q Consensus 403 ll~~ 406 (445)
.+.+
T Consensus 171 ~~~~ 174 (176)
T 2iz6_A 171 LLAK 174 (176)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 6543
No 62
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=66.23 E-value=8.4 Score=35.12 Aligned_cols=131 Identities=11% Similarity=-0.022 Sum_probs=72.7
Q ss_pred CCceEEEEeccccc---CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEec--cH-HH
Q 013342 259 PESVIYVSLGSVAS---MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWA--PQ-KE 332 (445)
Q Consensus 259 ~~~~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~--pq-~~ 332 (445)
+++.|.+..|+... .+.+.+.++++-|.+.+.++++..++. + ....-+.+.+.. +++.+.+-. .+ .+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~-----~-e~~~~~~i~~~~-~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP-----H-EEERAKRLAEGF-AYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH-----H-HHHHHHHHHTTC-TTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH-----H-HHHHHHHHHhhC-CcccccCCCCHHHHHH
Confidence 45677777776533 456677777777766566665543211 0 000011111111 233333222 22 45
Q ss_pred HhhccccCceeeccCchhHHHHHhhCCCcccC--CcccchhhhHHHHHhhheee-eEe-----Cc-ccCHHHHHHHHHHH
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCEGVPMICR--PCFGDQRVNARYVSHVWRTG-LEL-----EN-ELEREVVEKAVRRL 403 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~--P~~~DQ~~na~~v~~~~G~g-~~~-----~~-~~t~~~l~~ai~~l 403 (445)
++.++++ +|+.- .|+++=|.+.|+|+|++ |... .+..= +|-. ..+ .. .++++++.+++.++
T Consensus 250 li~~a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p------~~~~P-~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~ 319 (326)
T 2gt1_A 250 VLAGAKF--VVSVD-TGLSHLTAALDRPNITVYGPTDP------GLIGG-YGKNQMVCRAPGNELSQLTANAVKQFIEEN 319 (326)
T ss_dssp HHHTCSE--EEEES-SHHHHHHHHTTCCEEEEESSSCH------HHHCC-CSSSEEEEECGGGCGGGCCHHHHHHHHHHT
T ss_pred HHHhCCE--EEecC-CcHHHHHHHcCCCEEEEECCCCh------hhcCC-CCCCceEecCCcccccCCCHHHHHHHHHHH
Confidence 8999999 99862 44555577799999998 4321 11111 1111 111 11 78999999999999
Q ss_pred hcC
Q 013342 404 MVG 406 (445)
Q Consensus 404 l~~ 406 (445)
|++
T Consensus 320 l~~ 322 (326)
T 2gt1_A 320 AEK 322 (326)
T ss_dssp TTT
T ss_pred HHH
Confidence 976
No 63
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=65.67 E-value=6.1 Score=34.78 Aligned_cols=25 Identities=28% Similarity=0.236 Sum_probs=19.7
Q ss_pred HHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 15 MLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
+..|+++|.+.| +|+++.+..+.+.
T Consensus 17 i~~L~~~l~~~g-~V~VvAP~~~~Sg 41 (251)
T 2wqk_A 17 INALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred HHHHHHHHHhCC-CEEEEeeCCCCcc
Confidence 678999999998 5999888655544
No 64
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=63.75 E-value=23 Score=31.04 Aligned_cols=26 Identities=27% Similarity=0.207 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 013342 14 PMLQLGTILYSNGFSITVVHTHFNPPN 40 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 40 (445)
-+..|+++|.+.| +|+++.+..+.+.
T Consensus 16 Gi~aL~~~l~~~g-~V~VVAP~~~~Sg 41 (251)
T 2phj_A 16 GINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp HHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred HHHHHHHHHHhcC-CEEEEecCCCccC
Confidence 3678999999988 9999999765554
No 65
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=61.80 E-value=3.9 Score=40.61 Aligned_cols=22 Identities=18% Similarity=0.387 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCeEEEEeCCC
Q 013342 15 MLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
.-+|+++|+++||+|+++++.+
T Consensus 32 v~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 32 LGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp HHHHHHHHHTTTCEEEEEEECC
T ss_pred HHHHHHHHHHcCCeEEEEecCc
Confidence 5689999999999999999753
No 66
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=61.11 E-value=12 Score=25.89 Aligned_cols=48 Identities=13% Similarity=0.147 Sum_probs=35.0
Q ss_pred hCCCcccCCcccchhhhH---HHHHhhheeeeEeCcccCHHHHHHHHHHHhc
Q 013342 357 EGVPMICRPCFGDQRVNA---RYVSHVWRTGLELENELEREVVEKAVRRLMV 405 (445)
Q Consensus 357 ~GvP~v~~P~~~DQ~~na---~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~ 405 (445)
+|+|+++.--.+-|...- ....++ |+...+-+..++++|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-CcchhhhccCCHHHHHHHHHHHHH
Confidence 688998887777665433 334454 777666567899999999998874
No 67
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=60.87 E-value=4.8 Score=35.99 Aligned_cols=53 Identities=17% Similarity=0.174 Sum_probs=37.9
Q ss_pred ccccCceeeccCchhHHHHHhh------CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 336 HVAVGGFWSHCGWNSTLECLCE------GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~------GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+++ +|+-||-||++++... ++|++.+|. -. +|. +. ++.++++.+++++++++
T Consensus 35 ~~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~-----------G~-lgf---l~-~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 35 EPEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT-----------GH-LGF---YA-DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SCSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES-----------SS-CCS---SC-CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC-----------CC-CCc---CC-cCCHHHHHHHHHHHHcC
Confidence 3566 9999999999999775 788888875 22 231 11 34567788888888765
No 68
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=59.44 E-value=14 Score=35.64 Aligned_cols=39 Identities=10% Similarity=0.152 Sum_probs=33.8
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNPP 39 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~ 39 (445)
+++...|+.|-..-.+.+|...+.+|..|.+++.+....
T Consensus 200 iiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ 238 (444)
T 3bgw_A 200 VLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKK 238 (444)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTT
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHH
Confidence 356778999999999999999999999999999876554
No 69
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=57.03 E-value=46 Score=27.84 Aligned_cols=55 Identities=20% Similarity=0.314 Sum_probs=40.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC-CC-----CCCCCCceEEEcCCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP-PN-----PSNHPEFNFQSIPDGL 56 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~-~~-----~~~~~~~~~~~l~~~~ 56 (445)
|++++..+.|-..-.+.+|.+...+|+.|.|+..-... .. ..+. ++.++....++
T Consensus 31 i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L-~v~~~~~g~gf 91 (196)
T 1g5t_A 31 IIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH-GVEFQVMATGF 91 (196)
T ss_dssp EEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG-TCEEEECCTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC-CcEEEEccccc
Confidence 46777788999999999999999999999999764321 11 2223 58888887644
No 70
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=53.46 E-value=4.6 Score=38.55 Aligned_cols=27 Identities=19% Similarity=0.253 Sum_probs=22.8
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013342 10 GHMTPMLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 10 GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
|=......||++|+++||+|++++...
T Consensus 63 GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 63 GGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp HHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred cHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 434568999999999999999999853
No 71
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=51.40 E-value=30 Score=26.92 Aligned_cols=64 Identities=16% Similarity=0.116 Sum_probs=40.7
Q ss_pred hCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 013342 357 EGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 357 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~ 425 (445)
..+|+|++--..+. .......+ .|+--.+.+.++.++|.++|+.++.. ..+++..+++++.+..
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~~~ 137 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK---RRLVMENRSLRRAAEA 137 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 36788877554443 34444455 37655565568999999999999976 4554544455444443
No 72
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=50.45 E-value=10 Score=36.61 Aligned_cols=26 Identities=15% Similarity=0.157 Sum_probs=21.7
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 10 GHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 10 GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
|=-.-...|+++|+++||+|+++++.
T Consensus 18 G~~~~~~~la~~L~~~G~~V~vi~~~ 43 (485)
T 2qzs_A 18 GLADVIGALPAAQIADGVDARVLLPA 43 (485)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred cHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 33456788999999999999999974
No 73
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=48.83 E-value=68 Score=26.91 Aligned_cols=142 Identities=13% Similarity=0.041 Sum_probs=78.6
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCC---chHHHHHHhcCCcEEEEe--ccHHHHh
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDL---LPEVLAEAVQENGCIVKW--APQKEVL 334 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~n~~~~~~--~pq~~lL 334 (445)
+.+++.-.|+.... +..-++++.|.+.+..+-++.+.....=....+. +.+.++ ...++-.+.++ +++-++-
T Consensus 8 k~I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~~~~~~~~~~~l~-~l~g~~v~~~~~~~~hi~~s 84 (201)
T 3lqk_A 8 KHVGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHTVQTTDTKFGESSEWINKIK-QITEEPIVDSMVKAEPFGPK 84 (201)
T ss_dssp CEEEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSCSCCTTCCTTCSCHHHHHHH-HHCCSCCBCSHHHHGGGTTT
T ss_pred CEEEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChhHHHHHHHhhchhHHHHHHH-HHhCCCeEeecCcccccccc
Confidence 44666666665431 1234566777777877666654332110000000 011222 22333222222 1233332
Q ss_pred hccccCceeeccCchhHHH----------------HHhhCCCcccCCc----ccchhhhHHHHHhhheeeeEeCc-----
Q 013342 335 SHVAVGGFWSHCGWNSTLE----------------CLCEGVPMICRPC----FGDQRVNARYVSHVWRTGLELEN----- 389 (445)
Q Consensus 335 ~~~~~~~~I~HgG~gsv~e----------------al~~GvP~v~~P~----~~DQ~~na~~v~~~~G~g~~~~~----- 389 (445)
..+|+ .+|.=|-+||+.. ++..+.|+|++|- .+..+.|-.++.+ +|+=+....
T Consensus 85 ~~aD~-mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~~~~~ 162 (201)
T 3lqk_A 85 TPLDC-MVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFGQDNP 162 (201)
T ss_dssp SCCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEEESCT
T ss_pred cccCE-EEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCCcccc
Confidence 33443 5777787776543 3567999999994 5778889999999 686554321
Q ss_pred -------ccCHHHHHHHHHHHhcC
Q 013342 390 -------ELEREVVEKAVRRLMVG 406 (445)
Q Consensus 390 -------~~t~~~l~~ai~~ll~~ 406 (445)
..+.+.|.++|.+.|++
T Consensus 163 ~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 163 QVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp TTCTTCEEECGGGHHHHHHHHHTT
T ss_pred ccCCCcccCCHHHHHHHHHHHHhc
Confidence 24558899999999876
No 74
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=46.75 E-value=1.2e+02 Score=24.89 Aligned_cols=139 Identities=13% Similarity=0.106 Sum_probs=72.7
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccC
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVG 340 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~ 340 (445)
|.|-|-+||.. +...+++....|+.++.++=..+.+- =..|+.+.+.. .+- -=..+++
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~~~~----------~~a-~~~g~~V- 71 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA--------HRTPDRMFEYA----------KNA-EERGIEV- 71 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHHHHH----------HHT-TTTTCCE-
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHHHHH----------HHH-HhCCCcE-
Confidence 46777777665 67778888888888888765554322 12454443210 000 0012334
Q ss_pred ceeeccCch----hHHHHHhhCCCcccCCcccc-hhhhHHH--HHhhh--eeeeEe---CcccCHHHHHHHHHHHhcCCc
Q 013342 341 GFWSHCGWN----STLECLCEGVPMICRPCFGD-QRVNARY--VSHVW--RTGLEL---ENELEREVVEKAVRRLMVGEE 408 (445)
Q Consensus 341 ~~I~HgG~g----sv~eal~~GvP~v~~P~~~D-Q~~na~~--v~~~~--G~g~~~---~~~~t~~~l~~ai~~ll~~~~ 408 (445)
+|.-+|.- ++..++ .-+|+|.||.... -...... +.+ + |+.+.. +...++.-++..|. -+.|
T Consensus 72 -iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~~~nAa~lAaqIl-a~~d-- 145 (183)
T 1o4v_A 72 -IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINNAKNAGILAASIL-GIKY-- 145 (183)
T ss_dssp -EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTCHHHHHHHHHHHH-HTTC--
T ss_pred -EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCchHHHHHHHHHH-hcCC--
Confidence 66555532 333333 5678888887542 1122222 233 3 533221 22344555554443 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 013342 409 GEEMRQRAKNLKEEIELCIT 428 (445)
Q Consensus 409 ~~~~~~~a~~l~~~~~~~~~ 428 (445)
+.++++.+..++.+++.+.
T Consensus 146 -~~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 146 -PEIARKVKEYKERMKREVL 164 (183)
T ss_dssp -HHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 6777777777777766543
No 75
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=46.66 E-value=7.7 Score=40.09 Aligned_cols=107 Identities=7% Similarity=-0.041 Sum_probs=75.9
Q ss_pred EeccHHHHhhccccCceeeccCchhHHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEe----C-c-ccCHHHHHHH
Q 013342 326 KWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLEL----E-N-ELEREVVEKA 399 (445)
Q Consensus 326 ~~~pq~~lL~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~----~-~-~~t~~~l~~a 399 (445)
++.+-.++|..+|+ +||=- ...+.|.+..++|+|......|+... +. .|.=..+ . + --+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~----~~-rg~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDK----GL-RGFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTS----SC-CSBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhh----cc-CCcccChhHhCCCCeECCHHHHHHH
Confidence 45567889999998 99854 56889999999999998877666432 11 1322111 1 1 4678999999
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 013342 400 VRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKSLNEFLEF 443 (445)
Q Consensus 400 i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 443 (445)
|.+...+. ..|+++.+++.+++-.. +.|.++++.++.+++.
T Consensus 677 i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~ 717 (729)
T 3l7i_A 677 LKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKD 717 (729)
T ss_dssp HTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHH
T ss_pred Hhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhc
Confidence 98887632 56788888888777654 6677788887777664
No 76
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=46.33 E-value=1.1e+02 Score=27.01 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=29.0
Q ss_pred cCCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 013342 5 PSPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP 38 (445)
Q Consensus 5 ~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~ 38 (445)
+-|+.|-..-...||..|++.|..|.++-.+...
T Consensus 100 ~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~~ 133 (286)
T 3la6_A 100 VSPSIGMTFVCANLAAVISQTNKRVLLIDCDMRK 133 (286)
T ss_dssp SSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTTT
T ss_pred CCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCCC
Confidence 3478888999999999999999999999876543
No 77
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=46.02 E-value=1.5e+02 Score=26.01 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=28.3
Q ss_pred CCCccChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 013342 6 SPFQGHMTPMLQLGTILYSNGFSITVVHTHFNP 38 (445)
Q Consensus 6 ~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~ 38 (445)
-|+.|=..-...||..|+++|..|.++-.+...
T Consensus 91 kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~~ 123 (271)
T 3bfv_A 91 APGAGKSTIAANLAVAYAQAGYKTLIVDGDMRK 123 (271)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred CCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 378888899999999999999999999776443
No 78
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=41.64 E-value=2.1e+02 Score=27.35 Aligned_cols=148 Identities=9% Similarity=0.038 Sum_probs=81.8
Q ss_pred hhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhc-CCcEEEEeccHH
Q 013342 253 WLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ-ENGCIVKWAPQK 331 (445)
Q Consensus 253 wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~~pq~ 331 (445)
|++ -.+++++.|..|... ..-+..|.+.+.++.++-.. +.+.+.+... .++.+..---+.
T Consensus 7 ~~~-l~~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~-----------~~~~~~~l~~~~~i~~~~~~~~~ 67 (457)
T 1pjq_A 7 FCQ-LRDRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT-----------FIPQFTVWANEGMLTLVEGPFDE 67 (457)
T ss_dssp EEC-CBTCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS-----------CCHHHHHHHTTTSCEEEESSCCG
T ss_pred EEE-CCCCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC-----------CCHHHHHHHhcCCEEEEECCCCc
Confidence 444 345678888888654 45566677778877666421 2223332222 344444222233
Q ss_pred HHhhccccCceeeccCchh-----HHHHHhhCCCcccCCcccchhhhHHHH-----Hhh-heeeeEeCc--ccCHHHHHH
Q 013342 332 EVLSHVAVGGFWSHCGWNS-----TLECLCEGVPMICRPCFGDQRVNARYV-----SHV-WRTGLELEN--ELEREVVEK 398 (445)
Q Consensus 332 ~lL~~~~~~~~I~HgG~gs-----v~eal~~GvP~v~~P~~~DQ~~na~~v-----~~~-~G~g~~~~~--~~t~~~l~~ 398 (445)
.-|..+++ +|.--|.-. ..+|-..|+|+-++ |++..+... .+. +-+|+.=.. ..-...|++
T Consensus 68 ~~l~~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~----d~~e~~~~~~pa~~~~~~l~iaIsT~Gksp~la~~ir~ 141 (457)
T 1pjq_A 68 TLLDSCWL--AIAATDDDTVNQRVSDAAESRRIFCNVV----DAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLRE 141 (457)
T ss_dssp GGGTTCSE--EEECCSCHHHHHHHHHHHHHTTCEEEET----TCTTSSSEECCEEEEETTEEEEEECTTSCHHHHHHHHH
T ss_pred cccCCccE--EEEcCCCHHHHHHHHHHHHHcCCEEEEC----CCcccCceEeeeEEEeCCeEEEEECCCCChHHHHHHHH
Confidence 44667777 877777654 34455678886332 333333222 121 234444222 222578888
Q ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 013342 399 AVRRLMVGEEGEEMRQRAKNLKEEIELC 426 (445)
Q Consensus 399 ai~~ll~~~~~~~~~~~a~~l~~~~~~~ 426 (445)
.|.+.+.+.- ..+.+.+.++++++++.
T Consensus 142 ~ie~~l~~~~-~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 142 KLESLLPQHL-GQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHSCTTH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHhcchhH-HHHHHHHHHHHHHHHhh
Confidence 8888886432 46777777888777765
No 79
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=41.60 E-value=66 Score=28.50 Aligned_cols=154 Identities=9% Similarity=-0.000 Sum_probs=82.2
Q ss_pred hhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHH---------------
Q 013342 253 WLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEA--------------- 317 (445)
Q Consensus 253 wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--------------- 317 (445)
+++ -.++.++.|..|.+. ...+..|.+.|.++.++-... ...+.+.+...
T Consensus 8 ~~~-l~~k~VLVVGgG~va-------~rka~~Ll~~Ga~VtViap~~-------~~~l~~~~~~l~~~~~~~~~~~~~~~ 72 (274)
T 1kyq_A 8 AHQ-LKDKRILLIGGGEVG-------LTRLYKLMPTGCKLTLVSPDL-------HKSIIPKFGKFIQNKDQPDYREDAKR 72 (274)
T ss_dssp EEC-CTTCEEEEEEESHHH-------HHHHHHHGGGTCEEEEEEEEE-------CTTHHHHHCGGGC-----------CE
T ss_pred EEE-cCCCEEEEECCcHHH-------HHHHHHHHhCCCEEEEEcCCC-------CcchhHHHHHHHhccccccccchhhc
Confidence 444 356778989888665 556677778888877664211 01111111111
Q ss_pred --------hcCCc-EEEEeccHHHHhh------ccccCceeeccCchhHHHHHh-----h---CCCcccCCcccchhhhH
Q 013342 318 --------VQENG-CIVKWAPQKEVLS------HVAVGGFWSHCGWNSTLECLC-----E---GVPMICRPCFGDQRVNA 374 (445)
Q Consensus 318 --------~~~n~-~~~~~~pq~~lL~------~~~~~~~I~HgG~gsv~eal~-----~---GvP~v~~P~~~DQ~~na 374 (445)
..+++ .++.---....|. .+++ +|.--|--.+++.++ . |+|+-++ |.+..+
T Consensus 73 ~~~~~~~~~~g~i~~~i~~~~~~~dL~~l~~~~~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~ 146 (274)
T 1kyq_A 73 FINPNWDPTKNEIYEYIRSDFKDEYLDLENENDAWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLC 146 (274)
T ss_dssp EECTTCCTTSCCCSEEECSSCCGGGGCCSSTTCCEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGB
T ss_pred ccccccccccCCeeEEEcCCCCHHHHhhcccCCCeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccC
Confidence 11233 3331111233454 6676 777777654444433 2 5555223 444444
Q ss_pred H-----HHHhh--heeeeEeCc--ccCHHHHHHHHHHHh---cCCcHHHHHHHHHHHHHHHHHHH
Q 013342 375 R-----YVSHV--WRTGLELEN--ELEREVVEKAVRRLM---VGEEGEEMRQRAKNLKEEIELCI 427 (445)
Q Consensus 375 ~-----~v~~~--~G~g~~~~~--~~t~~~l~~ai~~ll---~~~~~~~~~~~a~~l~~~~~~~~ 427 (445)
. .+.+. +-+|+.=.. ..-+..|++.|...+ .+++...+.+.+.++++.+++.+
T Consensus 147 ~f~~Pa~~~~g~~l~IaIST~Gksp~lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~~ 211 (274)
T 1kyq_A 147 DFYFGANLEIGDRLQILISTNGLSPRFGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRLLA 211 (274)
T ss_dssp SEECCEEEEETTTEEEEEEESSSCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred eeEeeeEEEeCCCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhC
Confidence 4 33332 123333222 344577888888888 53333578888888888888763
No 80
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=40.83 E-value=2e+02 Score=25.99 Aligned_cols=109 Identities=15% Similarity=0.190 Sum_probs=58.5
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhC-CCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcccc
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNS-KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAV 339 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~ 339 (445)
.+.+|..|.+. ..++.++.+. +..++.++..+ ++...+....-. ..-+-...+++..+++
T Consensus 6 rvgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~-----------~~~~~~~a~~~g-~~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 6 RIALFGAGRIG-------HVHAANIAANPDLELVVIADPF-----------IEGAQRLAEANG-AEAVASPDEVFARDDI 66 (344)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS-----------HHHHHHHHHTTT-CEEESSHHHHTTCSCC
T ss_pred EEEEECCcHHH-------HHHHHHHHhCCCcEEEEEECCC-----------HHHHHHHHHHcC-CceeCCHHHHhcCCCC
Confidence 47788888765 3466777765 44666566332 222211111111 3345567888884443
Q ss_pred CceeeccCch----hHHHHHhhCCCccc-CCccc--ch-hhhHHHHHhhheeeeEeCc
Q 013342 340 GGFWSHCGWN----STLECLCEGVPMIC-RPCFG--DQ-RVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 340 ~~~I~HgG~g----sv~eal~~GvP~v~-~P~~~--DQ-~~na~~v~~~~G~g~~~~~ 389 (445)
.+++.--... .+.+++.+|+++++ -|+.. ++ ....+.+++. |+-+.+..
T Consensus 67 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~-g~~~~v~~ 123 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDG-ASKVMLGF 123 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGG-GGGEEECC
T ss_pred CEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhc-CCeEEecc
Confidence 3366544433 36678889998876 35433 22 3334444553 66555544
No 81
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=39.95 E-value=51 Score=24.90 Aligned_cols=63 Identities=11% Similarity=0.004 Sum_probs=36.4
Q ss_pred CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 013342 358 GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIE 424 (445)
Q Consensus 358 GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~ 424 (445)
.+|+|++--..|.......+.. .|+--.+.+.++.++|.++|++++.. ....+..+++.+..+
T Consensus 72 ~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~~ 134 (139)
T 2jk1_A 72 ETVRIIITGYTDSASMMAAIND-AGIHQFLTKPWHPEQLLSSARNAARM---FTLARENERLSLEMR 134 (139)
T ss_dssp TSEEEEEESCTTCHHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHh-hchhhhccCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 4666666544444444444444 25533444468999999999999865 344444444444433
No 82
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=39.91 E-value=28 Score=27.15 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=29.9
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
+++.+.++-+|-....-++..|..+|++|..+..
T Consensus 6 vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~ 39 (137)
T 1ccw_A 6 IVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp EEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCC
Confidence 4667778889999999999999999999998876
No 83
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=39.84 E-value=78 Score=27.38 Aligned_cols=27 Identities=15% Similarity=0.105 Sum_probs=23.6
Q ss_pred CCccChHHHHHHHHHHHhCCCeEEEEe
Q 013342 7 PFQGHMTPMLQLGTILYSNGFSITVVH 33 (445)
Q Consensus 7 p~~GH~~p~l~La~~L~~~Gh~Vt~~~ 33 (445)
...|=..-.+.|++.|.++|.+|.++=
T Consensus 31 t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 31 TNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp TTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 567778888999999999999999874
No 84
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=39.20 E-value=23 Score=30.52 Aligned_cols=29 Identities=14% Similarity=0.016 Sum_probs=23.9
Q ss_pred ccccCceeeccCchhHHHHHhhCCCcccCCcc
Q 013342 336 HVAVGGFWSHCGWNSTLECLCEGVPMICRPCF 367 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~ 367 (445)
.+++ +|+.||-+...... .++|+|-++..
T Consensus 63 ~~dV--IISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 63 RCDA--IIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CCSE--EEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CCeE--EEeCChHHHHHHhh-CCCCEEEecCC
Confidence 3777 99999988888865 57999999974
No 85
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=38.43 E-value=1e+02 Score=26.94 Aligned_cols=32 Identities=22% Similarity=0.139 Sum_probs=23.4
Q ss_pred CceEEE-EcCCC-CchHHHHHHhCCceEEEccch
Q 013342 101 QIACII-YDEIF-YFPEAAANQLNLQSIILRTTS 132 (445)
Q Consensus 101 ~~D~vv-~D~~~-~~~~~~A~~~giP~v~~~~~~ 132 (445)
.||+|| .|+.. ..+..=|.++|||+|.+.-+.
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 789887 55544 456667888999999976543
No 86
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=38.24 E-value=1.6e+02 Score=23.85 Aligned_cols=137 Identities=14% Similarity=0.135 Sum_probs=80.3
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhh----
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLS---- 335 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~---- 335 (445)
+|.|-|-+||.. +.+.+++....|+.++.++=..+.+- =..|+.+. ++..
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~----------------~~~~~a~~ 64 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--------HRTPDYMF----------------EYAETARE 64 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHH----------------HHHHHTTT
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec--------cCCHHHHH----------------HHHHHHHh
Confidence 456777777765 77788889999999998765555322 12444432 1221
Q ss_pred -ccccCceeeccCchhHHHHHh---hCCCcccCCcccc-hhhhHHHH--Hh--hheeee---EeC--cccCHHHHHHHHH
Q 013342 336 -HVAVGGFWSHCGWNSTLECLC---EGVPMICRPCFGD-QRVNARYV--SH--VWRTGL---ELE--NELEREVVEKAVR 401 (445)
Q Consensus 336 -~~~~~~~I~HgG~gsv~eal~---~GvP~v~~P~~~D-Q~~na~~v--~~--~~G~g~---~~~--~~~t~~~l~~ai~ 401 (445)
..++ +|.-+|.-.-+-.+. .-+|+|.+|.... -......+ .+ . |+.+ .++ .-.++.-++..|.
T Consensus 65 ~g~~V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl 141 (170)
T 1xmp_A 65 RGLKV--IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL 141 (170)
T ss_dssp TTCCE--EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH
T ss_pred CCCcE--EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH
Confidence 1344 777666443333333 3569999998542 22222222 22 2 5542 223 1245555555553
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHhc
Q 013342 402 RLMVGEEGEEMRQRAKNLKEEIELCITE 429 (445)
Q Consensus 402 ~ll~~~~~~~~~~~a~~l~~~~~~~~~~ 429 (445)
-+.| +.++++.+..++++++.+.+
T Consensus 142 -a~~d---~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 142 -GSFH---DDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp -HTTC---HHHHHHHHHHHHHHHHHHHC
T ss_pred -ccCC---HHHHHHHHHHHHHHHHHHHh
Confidence 4467 78999999999998887554
No 87
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=38.20 E-value=24 Score=29.77 Aligned_cols=34 Identities=21% Similarity=0.137 Sum_probs=29.0
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
|++.+.++-.|-....-++..|..+|++|.++..
T Consensus 91 vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~ 124 (210)
T 1y80_A 91 IVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGV 124 (210)
T ss_dssp EEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCS
T ss_pred EEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCC
Confidence 4677788889999999999999999999998775
No 88
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=38.07 E-value=31 Score=30.34 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=31.4
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 126 vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 126 VVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 47788899999999999999999999999988764
No 89
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=37.67 E-value=33 Score=23.33 Aligned_cols=52 Identities=12% Similarity=0.132 Sum_probs=28.9
Q ss_pred ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-h-cCCChHHHHHHHHHH
Q 013342 390 ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCI-T-EGGSSYKSLNEFLEF 443 (445)
Q Consensus 390 ~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~-~-~~g~~~~~~~~~~~~ 443 (445)
..|.++|.++|+++|.+.+..+... +++++.+.+.. + .-...+..+.+.|..
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL~tvT~--K~VR~~Le~~~pg~dLs~kK~~I~~~I~~ 64 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANLEEVTM--KQICKKVYENYPTYDLTERKDFIKTTVKE 64 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGCCH--HHHHHHHHHHCSSSCCSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHhH--HHHHHHHHHHccCCCChHHHHHHHHHHHH
Confidence 5788999999999998655333222 33444444432 1 112333445555543
No 90
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=37.49 E-value=30 Score=26.80 Aligned_cols=33 Identities=15% Similarity=0.057 Sum_probs=25.9
Q ss_pred EEcCC--CccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 3 LVPSP--FQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 3 ~~~~p--~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
++..+ ........+.+|...++.||+|+++.+.
T Consensus 21 i~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 21 VVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp EECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred EEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 45555 4557778899999999999999987763
No 91
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=37.34 E-value=63 Score=29.79 Aligned_cols=26 Identities=19% Similarity=0.358 Sum_probs=20.7
Q ss_pred ccccCceeeccCchhH---HHHHhhCCCccc
Q 013342 336 HVAVGGFWSHCGWNST---LECLCEGVPMIC 363 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv---~eal~~GvP~v~ 363 (445)
++|+ +|++||.-++ ..|...|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 5787 9999998764 556778999985
No 92
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=37.15 E-value=1.8e+02 Score=26.50 Aligned_cols=124 Identities=15% Similarity=0.156 Sum_probs=64.9
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhC--CCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcc
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNS--KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHV 337 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~ 337 (445)
-.+.+|..|.+. ..++.++.+. +.+++.++..+ ++...+.... .-+..+-...++|..+
T Consensus 14 ~rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~-----------~~~~~~~~~~-~~~~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 14 IRFALVGCGRIA-------NNHFGALEKHADRAELIDVCDID-----------PAALKAAVER-TGARGHASLTDMLAQT 74 (354)
T ss_dssp EEEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSS-----------HHHHHHHHHH-HCCEEESCHHHHHHHC
T ss_pred ceEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCC-----------HHHHHHHHHH-cCCceeCCHHHHhcCC
Confidence 358889999876 3566777776 45666666332 2221111111 1124556778888754
Q ss_pred ccCceeeccCc----hhHHHHHhhCCCccc-CCccc---chhhhHHHHHhhheeeeEeCc--ccCHHHHHHHHHHHhc
Q 013342 338 AVGGFWSHCGW----NSTLECLCEGVPMIC-RPCFG---DQRVNARYVSHVWRTGLELEN--ELEREVVEKAVRRLMV 405 (445)
Q Consensus 338 ~~~~~I~HgG~----gsv~eal~~GvP~v~-~P~~~---DQ~~na~~v~~~~G~g~~~~~--~~t~~~l~~ai~~ll~ 405 (445)
++.+++--.-. -.+.+++.+|+++++ -|+.. |-....+..++. |+-+.+.. ...+ ..+.+++++.
T Consensus 75 ~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~-g~~~~v~~~~r~~p--~~~~~k~~i~ 149 (354)
T 3q2i_A 75 DADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKA-KKHLFVVKQNRRNA--TLQLLKRAMQ 149 (354)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH-TCCEEECCGGGGSH--HHHHHHHHHH
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHh-CCeEEEEEcccCCH--HHHHHHHHHh
Confidence 44336542222 235677888888776 35432 223334444553 66655544 4444 2334445544
No 93
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=37.02 E-value=1.7e+02 Score=23.95 Aligned_cols=119 Identities=14% Similarity=0.083 Sum_probs=71.8
Q ss_pred CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHH
Q 013342 273 MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTL 352 (445)
Q Consensus 273 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~ 352 (445)
..++.+.++++..++.+.++++...+. ...||.-+....+-.++=++- ..+ +-+|..+.+
T Consensus 52 R~p~~l~~~~~~a~~~g~~ViIa~AG~-------aa~LpgvvA~~t~~PVIgVP~----------~~~---~l~G~dsLl 111 (183)
T 1o4v_A 52 RTPDRMFEYAKNAEERGIEVIIAGAGG-------AAHLPGMVASITHLPVIGVPV----------KTS---TLNGLDSLF 111 (183)
T ss_dssp TCHHHHHHHHHHTTTTTCCEEEEEEES-------SCCHHHHHHHHCSSCEEEEEE----------CCT---TTTTHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEecCc-------ccccHHHHHhccCCCEEEeeC----------CCC---CCCcHHHHH
Confidence 677888888887777788888877544 345776543333333333331 110 246777888
Q ss_pred HHHhh--CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 013342 353 ECLCE--GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 353 eal~~--GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~ 425 (445)
..+.. |+|+-+ +..|-.+||..++.. = + .+...+|++++++--.+ +++..++-.+++++
T Consensus 112 SivqmP~GvpVat--V~Id~~~nAa~lAaq-I----l--a~~d~~l~~kL~~~r~~-----~~~~v~~~~~~l~~ 172 (183)
T 1o4v_A 112 SIVQMPGGVPVAT--VAINNAKNAGILAAS-I----L--GIKYPEIARKVKEYKER-----MKREVLEKAQRLEQ 172 (183)
T ss_dssp HHHTCCTTCCCEE--CCTTCHHHHHHHHHH-H----H--HTTCHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred HHhcCCCCCeeEE--EecCCchHHHHHHHH-H----H--hcCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 88888 999433 344688898888763 1 1 34557788888665543 44444444444443
No 94
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=37.01 E-value=18 Score=30.36 Aligned_cols=31 Identities=13% Similarity=0.060 Sum_probs=24.7
Q ss_pred hccccCceeeccCchhHHHHHhhCCCcccCCccc
Q 013342 335 SHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFG 368 (445)
Q Consensus 335 ~~~~~~~~I~HgG~gsv~eal~~GvP~v~~P~~~ 368 (445)
..+++ +|+.||-....... .++|+|-++..+
T Consensus 50 ~~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 35666 99999988888865 579999999853
No 95
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=36.84 E-value=20 Score=28.97 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=29.2
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
|++.+.++-.|-....-++..|..+|++|.++..
T Consensus 21 vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~ 54 (161)
T 2yxb_A 21 VLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGL 54 (161)
T ss_dssp EEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCS
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 4667778899999999999999999999998765
No 96
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=35.78 E-value=16 Score=22.85 Aligned_cols=40 Identities=15% Similarity=0.207 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 013342 392 EREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIELCITEGGSSYKS 436 (445)
Q Consensus 392 t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 436 (445)
++.+|.+.|..+|.+ +..+-..|++.+-..+++=|+.-+.
T Consensus 3 ~~~dLt~~vq~LL~q-----mq~kFq~mS~~I~~riDdM~~RIDd 42 (48)
T 3ci9_A 3 TVQDLTSVVQTLLQQ-----MQDKFQTISDQIIGRIDDMSSRIDD 42 (48)
T ss_dssp CHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 678999999999965 8888888888887776655554333
No 97
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=35.49 E-value=17 Score=32.55 Aligned_cols=33 Identities=12% Similarity=-0.017 Sum_probs=26.0
Q ss_pred HHhhccccCceeeccCchhHHHHHhh----CCCcccCCc
Q 013342 332 EVLSHVAVGGFWSHCGWNSTLECLCE----GVPMICRPC 366 (445)
Q Consensus 332 ~lL~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~ 366 (445)
+.-..+++ +|+-||-||+++++.. ++|++.++.
T Consensus 59 ~~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 59 EIGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred hcccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 34445677 9999999999999753 788888873
No 98
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=35.20 E-value=12 Score=19.22 Aligned_cols=17 Identities=29% Similarity=0.626 Sum_probs=14.1
Q ss_pred CchhHHHHHhhCCCccc
Q 013342 347 GWNSTLECLCEGVPMIC 363 (445)
Q Consensus 347 G~gsv~eal~~GvP~v~ 363 (445)
|.|+++..|..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888999999998764
No 99
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=35.19 E-value=65 Score=29.67 Aligned_cols=27 Identities=7% Similarity=-0.218 Sum_probs=20.4
Q ss_pred ccccCceeec--cCchhHHHHHhhCCCcccC
Q 013342 336 HVAVGGFWSH--CGWNSTLECLCEGVPMICR 364 (445)
Q Consensus 336 ~~~~~~~I~H--gG~gsv~eal~~GvP~v~~ 364 (445)
++|+ +|+| .+.+....+-..|+|.+.+
T Consensus 102 ~pD~--Vi~d~~~~~~~~~aA~~~giP~v~~ 130 (402)
T 3ia7_A 102 PPDL--VVYDVFPFIAGRLLAARWDRPAVRL 130 (402)
T ss_dssp CCSE--EEEESTTHHHHHHHHHHHTCCEEEE
T ss_pred CCCE--EEECchHHHHHHHHHHhhCCCEEEE
Confidence 5777 8877 5555666778899998876
No 100
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=33.96 E-value=2.5e+02 Score=24.86 Aligned_cols=32 Identities=9% Similarity=0.211 Sum_probs=28.0
Q ss_pred CCCccChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 013342 6 SPFQGHMTPMLQLGTILYSNGFSITVVHTHFN 37 (445)
Q Consensus 6 ~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~ 37 (445)
-|+-|=..-...||..|+++|..|.++-.+..
T Consensus 113 kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r 144 (299)
T 3cio_A 113 TPDSGKTFVSSTLAAVIAQSDQKVLFIDADLR 144 (299)
T ss_dssp SSSSCHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCCChHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 47888899999999999999999999987653
No 101
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=33.87 E-value=15 Score=33.28 Aligned_cols=56 Identities=13% Similarity=0.102 Sum_probs=35.9
Q ss_pred HhhccccCceeeccCchhHHHHHhh----CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 333 VLSHVAVGGFWSHCGWNSTLECLCE----GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 333 lL~~~~~~~~I~HgG~gsv~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
....+++ +|+-||-||+++++.. ++|++.++.. . +|. +. ++.++++.+++.+++++
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G-----------~-~gf---l~-~~~~~~~~~~~~~i~~g 131 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLG-----------R-IGF---LA-EAEAEAIDAVLEHVVAQ 131 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECS-----------S-CCS---SC-SEEGGGHHHHHHHHHHT
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCC-----------C-Ccc---Cc-ccCHHHHHHHHHHHHcC
Confidence 4456777 9999999999999754 8898888642 1 121 11 23456677777777654
No 102
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=33.86 E-value=43 Score=25.11 Aligned_cols=65 Identities=9% Similarity=0.039 Sum_probs=46.7
Q ss_pred hhccccCceeeccCchh---------HHHHHhhCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHh
Q 013342 334 LSHVAVGGFWSHCGWNS---------TLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLM 404 (445)
Q Consensus 334 L~~~~~~~~I~HgG~gs---------v~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll 404 (445)
+..+++ +|--+|..| +-.|...|+|+|.|=.++.+. .-..+++. +..+. .-+.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~iV---~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSEVV---GWNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSEEE---CSCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cceec---cCCHHHHHHHHHhcc
Confidence 556777 999999988 566788999999998777652 22235552 44433 367899999998876
Q ss_pred c
Q 013342 405 V 405 (445)
Q Consensus 405 ~ 405 (445)
+
T Consensus 109 ~ 109 (111)
T 1eiw_A 109 D 109 (111)
T ss_dssp C
T ss_pred C
Confidence 4
No 103
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=32.68 E-value=14 Score=32.66 Aligned_cols=53 Identities=11% Similarity=0.040 Sum_probs=38.9
Q ss_pred ccccCceeeccCchhHHHHHhh---CCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 336 HVAVGGFWSHCGWNSTLECLCE---GVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~~---GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.+|+ +|+-||-||+++++.. ++|++.++.. . +|.-. ++.++++.+++.+++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gfl~----~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGFLT----SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCSSC----CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCccC----cCCHHHHHHHHHHHHcC
Confidence 4566 9999999999999877 7888877632 2 22221 35678888888888875
No 104
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=32.45 E-value=1e+02 Score=25.85 Aligned_cols=45 Identities=11% Similarity=-0.054 Sum_probs=31.2
Q ss_pred chhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEE
Q 013342 251 ISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWV 295 (445)
Q Consensus 251 ~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~ 295 (445)
.+|+.+...+.++||..++......+..+.+.++|+++|..+.++
T Consensus 19 ~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 19 TEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 445533345679999888764334456778999999999876544
No 105
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=32.22 E-value=46 Score=25.51 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=25.7
Q ss_pred EEEcCCCcc--ChHHHHHHHHHHHhCCCeE-EEEeCC
Q 013342 2 VLVPSPFQG--HMTPMLQLGTILYSNGFSI-TVVHTH 35 (445)
Q Consensus 2 l~~~~p~~G--H~~p~l~La~~L~~~Gh~V-t~~~~~ 35 (445)
++++.+-+| .....+.+|.++.+.||+| .++-..
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 455565555 4566799999999999999 887664
No 106
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=31.66 E-value=34 Score=29.54 Aligned_cols=22 Identities=18% Similarity=0.280 Sum_probs=19.0
Q ss_pred HHHHHHHHHhCCCeEEEEeCCC
Q 013342 15 MLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
-.++|++|.++|++|++++.+.
T Consensus 32 G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 32 GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEeCCc
Confidence 4678999999999999998753
No 107
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=31.36 E-value=1e+02 Score=28.05 Aligned_cols=67 Identities=10% Similarity=-0.136 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHHHHH
Q 013342 276 KEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTLECL 355 (445)
Q Consensus 276 ~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~eal 355 (445)
+..+.+...|++.+..+.+...... +.. ..+ -...+-..+++ +|.-||-||++|++
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~~-------~~~-~~~--------------~~~~~~~~~d~--vvv~GGDGTl~~v~ 99 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWEK-------GDA-ARY--------------VEEARKFGVAT--VIAGGGDGTINEVS 99 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCST-------THH-HHH--------------HHHHHHHTCSE--EEEEESHHHHHHHH
T ss_pred chHHHHHHHHHHcCCcEEEEEecCc-------chH-HHH--------------HHHHHhcCCCE--EEEEccchHHHHHH
Confidence 4566788888888877766542210 111 111 01122234566 99999999999985
Q ss_pred h--------hCCCcccCCc
Q 013342 356 C--------EGVPMICRPC 366 (445)
Q Consensus 356 ~--------~GvP~v~~P~ 366 (445)
. .++|+.++|.
T Consensus 100 ~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 100 TALIQCEGDDIPALGILPL 118 (332)
T ss_dssp HHHHHCCSSCCCEEEEEEC
T ss_pred HHHhhcccCCCCeEEEecC
Confidence 3 5679888886
No 108
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=31.30 E-value=38 Score=27.75 Aligned_cols=34 Identities=9% Similarity=-0.047 Sum_probs=25.3
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
++.-+++.|=+ -...+.+.|+++|++|.++.++.
T Consensus 9 llgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~ 42 (175)
T 3qjg_A 9 LICLCGSVNSI-NISHYIIELKSKFDEVNVIASTN 42 (175)
T ss_dssp EEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTG
T ss_pred EEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcC
Confidence 34444554444 48899999999999999998854
No 109
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=30.78 E-value=71 Score=24.50 Aligned_cols=48 Identities=6% Similarity=-0.150 Sum_probs=30.5
Q ss_pred hCCCcccCCcccchhhhHHHHHhhhe-eeeEeCcccCHHHHHHHHHHHhcC
Q 013342 357 EGVPMICRPCFGDQRVNARYVSHVWR-TGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 357 ~GvP~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
..+|+|++--..|.... ....+ .| +--.+.+.++.++|.++|++++..
T Consensus 75 ~~~~ii~~s~~~~~~~~-~~~~~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTA-MEAVN-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECGGGHHHH-HHHHH-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHH-HHHHH-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 35666666544444333 33444 26 533444468999999999999986
No 110
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=30.56 E-value=62 Score=26.95 Aligned_cols=110 Identities=6% Similarity=0.009 Sum_probs=65.7
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCC-------------CCCC-----CCCC--ChhHHH
Q 013342 10 GHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDG-------------LTAD-----DVST--GINILI 69 (445)
Q Consensus 10 GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~-------------~~~~-----~~~~--~~~~~~ 69 (445)
|.+.-.+.+|+.+ +.|.+|.+.-+ .....+.+..++.++.++-. .... +... +.+.+.
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRG-gta~~lr~~~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~ 113 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRG-ATSDYIKKSVSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIE 113 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEH-HHHHHHHTTCSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHH
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECC-hHHHHHHHhCCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHH
Confidence 5667788899999 88999777655 22222212235667766611 0000 0000 111122
Q ss_pred HHHHHH--------hcchHHHHHHHHHHhhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEEccchHHH
Q 013342 70 TNLLNV--------NCQAPFFECMVRMMEQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIILRTTSAAT 135 (445)
Q Consensus 70 ~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~~~~~~~~ 135 (445)
.+.. .......+.++++.+. ++|+||.+.. ...+|+++|+|.+.+.++....
T Consensus 114 --~ll~~~i~~~~~~~~~e~~~~i~~l~~~---------G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 114 --AMLGVKIKEFLFSSEDEITTLISKVKTE---------NIKIVVSGKT---VTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp --HHHTCEEEEEEECSGGGHHHHHHHHHHT---------TCCEEEECHH---HHHHHHHTTCEEEECCCCHHHH
T ss_pred --HHhCCceEEEEeCCHHHHHHHHHHHHHC---------CCeEEECCHH---HHHHHHHcCCcEEEEecCHHHH
Confidence 2222 1345566778888764 8899999843 4578999999999988865443
No 111
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=30.40 E-value=73 Score=28.54 Aligned_cols=29 Identities=17% Similarity=0.204 Sum_probs=23.8
Q ss_pred ccccCceeeccCchhHHHHHh------hCCCcccCCc
Q 013342 336 HVAVGGFWSHCGWNSTLECLC------EGVPMICRPC 366 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~------~GvP~v~~P~ 366 (445)
..++ +|.-||-||++|++. .++|+-++|.
T Consensus 63 ~~d~--vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 63 KVDL--IIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp TCSE--EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CCCE--EEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 4455 999999999999864 5789999997
No 112
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=29.62 E-value=62 Score=25.32 Aligned_cols=34 Identities=21% Similarity=0.426 Sum_probs=25.3
Q ss_pred EEEcCCCccChHH--HHHHHHHHHhCCCeE-EEEeCC
Q 013342 2 VLVPSPFQGHMTP--MLQLGTILYSNGFSI-TVVHTH 35 (445)
Q Consensus 2 l~~~~p~~GH~~p--~l~La~~L~~~Gh~V-t~~~~~ 35 (445)
+++..|-+|+-.. .+.+|+++.+.||+| .++-..
T Consensus 17 ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 17 IVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp EEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred EEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 4566677775544 578899999999999 776653
No 113
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=29.21 E-value=50 Score=25.96 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=27.7
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
+++..+..-.+++.+.+|...++.|++|+++.+
T Consensus 12 II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t 44 (144)
T 2qs7_A 12 IIVFSGTIDKLMPVGILTSGAAASGYEVNLFFT 44 (144)
T ss_dssp EEECCCSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEe
Confidence 455566677788999999999999999999887
No 114
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=29.20 E-value=81 Score=26.98 Aligned_cols=29 Identities=7% Similarity=0.080 Sum_probs=22.3
Q ss_pred CceEEEEcCCCCc-------hHHHHHHhCCceEEEc
Q 013342 101 QIACIIYDEIFYF-------PEAAANQLNLQSIILR 129 (445)
Q Consensus 101 ~~D~vv~D~~~~~-------~~~~A~~~giP~v~~~ 129 (445)
+||+|++|..... |..+.-.+++|+|.+.
T Consensus 103 ~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 103 KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 8999999987643 3456667799999854
No 115
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=28.99 E-value=2.2e+02 Score=23.62 Aligned_cols=94 Identities=12% Similarity=-0.027 Sum_probs=55.1
Q ss_pred hchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEE--Ee
Q 013342 250 CISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIV--KW 327 (445)
Q Consensus 250 l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~--~~ 327 (445)
+-++|.+ ++...||-| ....+....++..+.+-+++-++..... ..+ .....++ ..
T Consensus 50 lg~~LA~---~G~~vVsGg-----~~GiM~aa~~gAl~~GG~~iGVlP~e~~--------~~~------~~~~~~~~~~~ 107 (195)
T 1rcu_A 50 LGRTLAK---KGYLVFNGG-----RDGVMELVSQGVREAGGTVVGILPDEEA--------GNP------YLSVAVKTGLD 107 (195)
T ss_dssp HHHHHHH---TTCEEEECC-----SSHHHHHHHHHHHHTTCCEEEEESTTCC--------CCT------TCSEEEECCCC
T ss_pred HHHHHHH---CCCEEEeCC-----HHHHHHHHHHHHHHcCCcEEEEeCCccc--------CCC------CcceeeecCCC
Confidence 4456653 345667644 3347777777777777777777643210 000 0222333 23
Q ss_pred ccH-HHHhh-ccccCceeeccCchhHHHH---HhhCCCcccCCc
Q 013342 328 APQ-KEVLS-HVAVGGFWSHCGWNSTLEC---LCEGVPMICRPC 366 (445)
Q Consensus 328 ~pq-~~lL~-~~~~~~~I~HgG~gsv~ea---l~~GvP~v~~P~ 366 (445)
.+. +.++. .++. .++--||.||.-|+ +.+++|+++++.
T Consensus 108 f~~Rk~~m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 108 FQMRSFVLLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHHHHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 453 33443 4444 57778999987664 779999999974
No 116
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=28.53 E-value=1.4e+02 Score=24.32 Aligned_cols=114 Identities=13% Similarity=0.124 Sum_probs=64.3
Q ss_pred CceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCc-hHHHHHHhcCCcEEE---EeccHHHHhh
Q 013342 260 ESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLL-PEVLAEAVQENGCIV---KWAPQKEVLS 335 (445)
Q Consensus 260 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~---~~~pq~~lL~ 335 (445)
+.+++.-.|+.... ...++++.|++.+.++-++.+... ...+ +..+ +...+.++.. .|+++-++-.
T Consensus 6 k~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A------~~fi~~~~l-~~l~~~v~~~~~~~~~~hi~l~~ 75 (175)
T 3qjg_A 6 ENVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNG------RKFINGEIL-KQFCDNYYDEFEDPFLNHVDIAN 75 (175)
T ss_dssp CEEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGG------GGGSCHHHH-HHHCSCEECTTTCTTCCHHHHHH
T ss_pred CEEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCH------HHHhhHHHH-HHhcCCEEecCCCCccccccccc
Confidence 34666666665532 245577778877877766654331 1112 2223 2233322211 3455666666
Q ss_pred ccccCceeeccCchhHHH-------------HHhhCCCcccCCccc----ch---hhhHHHHHhhheeee
Q 013342 336 HVAVGGFWSHCGWNSTLE-------------CLCEGVPMICRPCFG----DQ---RVNARYVSHVWRTGL 385 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~e-------------al~~GvP~v~~P~~~----DQ---~~na~~v~~~~G~g~ 385 (445)
.+|+ .+|--|-+||+.. ++..++|+|++|-.. .. ..|-.++.+ +|+=+
T Consensus 76 ~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~i 143 (175)
T 3qjg_A 76 KHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVSI 143 (175)
T ss_dssp TCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCEE
T ss_pred hhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCEE
Confidence 6665 5777788876643 477789999999432 22 345666777 57643
No 117
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=28.38 E-value=2.4e+02 Score=25.75 Aligned_cols=90 Identities=12% Similarity=0.083 Sum_probs=49.9
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccC
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVG 340 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~ 340 (445)
.+.+|..|.+. ...++.++...+.+++.++..+. .-.+.+.+... ...-|-..+++|..+++.
T Consensus 28 rvgiiG~G~~~------~~~~~~~~~~~~~~lvav~d~~~--------~~a~~~a~~~~---~~~~~~~~~~ll~~~~vD 90 (361)
T 3u3x_A 28 RFAAVGLNHNH------IYGQVNCLLRAGARLAGFHEKDD--------ALAAEFSAVYA---DARRIATAEEILEDENIG 90 (361)
T ss_dssp EEEEECCCSTT------HHHHHHHHHHTTCEEEEEECSCH--------HHHHHHHHHSS---SCCEESCHHHHHTCTTCC
T ss_pred EEEEECcCHHH------HHHHHHHhhcCCcEEEEEEcCCH--------HHHHHHHHHcC---CCcccCCHHHHhcCCCCC
Confidence 47888888653 13355556566778777774330 01112222221 122355778899876655
Q ss_pred ceeeccCch----hHHHHHhhCCCccc-CCcc
Q 013342 341 GFWSHCGWN----STLECLCEGVPMIC-RPCF 367 (445)
Q Consensus 341 ~~I~HgG~g----sv~eal~~GvP~v~-~P~~ 367 (445)
+++--.... -+.+||.+|+++++ -|+.
T Consensus 91 ~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla 122 (361)
T 3u3x_A 91 LIVSAAVSSERAELAIRAMQHGKDVLVDKPGM 122 (361)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCEEEEESCSC
T ss_pred EEEEeCChHHHHHHHHHHHHCCCeEEEeCCCC
Confidence 566433322 35677888888777 4653
No 118
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=28.10 E-value=68 Score=29.24 Aligned_cols=29 Identities=14% Similarity=0.053 Sum_probs=23.6
Q ss_pred ccccCceeeccCchhHHHHHh------hCCCcccCCc
Q 013342 336 HVAVGGFWSHCGWNSTLECLC------EGVPMICRPC 366 (445)
Q Consensus 336 ~~~~~~~I~HgG~gsv~eal~------~GvP~v~~P~ 366 (445)
.+++ +|.-||-||++|++. .++|+.++|.
T Consensus 80 ~~d~--vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 80 NYDV--LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp TCSE--EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CCCE--EEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 4566 999999999999853 4679999997
No 119
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=28.05 E-value=1.4e+02 Score=25.22 Aligned_cols=135 Identities=8% Similarity=-0.060 Sum_probs=67.8
Q ss_pred hchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEecc
Q 013342 250 CISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAP 329 (445)
Q Consensus 250 l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p 329 (445)
+-++|.. ++...|+-|.- ...+....++..+.+-+++=++... ..+.......-.+..++...+
T Consensus 33 lg~~LA~---~g~~lV~GGg~----~GlM~aa~~gA~~~GG~~iGv~p~~---------l~~~e~~~~~~~~~~~~~~~~ 96 (216)
T 1ydh_A 33 LGNELVK---RKIDLVYGGGS----VGLMGLISRRVYEGGLHVLGIIPKA---------LMPIEISGETVGDVRVVADMH 96 (216)
T ss_dssp HHHHHHH---TTCEEEECCCS----SHHHHHHHHHHHHTTCCEEEEEEGG---------GHHHHCCSSCCSEEEEESSHH
T ss_pred HHHHHHH---CCCEEEECCCc----ccHhHHHHHHHHHcCCcEEEEechh---------cCccccccCCCCcccccCCHH
Confidence 3445542 23555666532 1367777777766666665554110 011100000001244555555
Q ss_pred HHH--HhhccccCceeeccCchhHHHHH---------hhCCCcccCCc--ccchhhhH-HHHHhhheeee--EeCc---c
Q 013342 330 QKE--VLSHVAVGGFWSHCGWNSTLECL---------CEGVPMICRPC--FGDQRVNA-RYVSHVWRTGL--ELEN---E 390 (445)
Q Consensus 330 q~~--lL~~~~~~~~I~HgG~gsv~eal---------~~GvP~v~~P~--~~DQ~~na-~~v~~~~G~g~--~~~~---~ 390 (445)
... +...++. .++--||.||.-|.. .+++|++.+-. ++|....- ..+.+. |.=- ..+. .
T Consensus 97 ~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~-Gfi~~~~~~~~~~~ 174 (216)
T 1ydh_A 97 ERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEE-GFIKPGARNIVVSA 174 (216)
T ss_dssp HHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHT-TSSCHHHHTTEEEE
T ss_pred HHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHC-CCCChHHcCeEEEe
Confidence 432 3344554 577789999988876 57999999874 34432221 233332 3210 0011 3
Q ss_pred cCHHHHHHHHHH
Q 013342 391 LEREVVEKAVRR 402 (445)
Q Consensus 391 ~t~~~l~~ai~~ 402 (445)
-|++++.+.+.+
T Consensus 175 d~~ee~~~~l~~ 186 (216)
T 1ydh_A 175 PTAKELMEKMEE 186 (216)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 467777777764
No 120
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=27.71 E-value=47 Score=28.18 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=28.7
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
+++.+.++-.|-....-++..|..+|++|..+...
T Consensus 95 vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 95 AITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 46677788888888888888888889998887664
No 121
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=27.35 E-value=3.4e+02 Score=24.27 Aligned_cols=110 Identities=11% Similarity=0.038 Sum_probs=54.8
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhCC-CCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcccc
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNSK-QPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAV 339 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~ 339 (445)
.+.+|..|.+. ..++.++.+.+ ..++.++..+. .-.+.+.+... ...-+-...++|..+++
T Consensus 7 ~igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~--------~~~~~~~~~~~---~~~~~~~~~~ll~~~~~ 68 (330)
T 3e9m_A 7 RYGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRRL--------ENAQKMAKELA---IPVAYGSYEELCKDETI 68 (330)
T ss_dssp EEEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSSS--------HHHHHHHHHTT---CCCCBSSHHHHHHCTTC
T ss_pred EEEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCCH--------HHHHHHHHHcC---CCceeCCHHHHhcCCCC
Confidence 47778888765 34677777753 45555553320 01112221111 11234566778874444
Q ss_pred CceeeccCch----hHHHHHhhCCCccc-CCccc--ch-hhhHHHHHhhheeeeEeCc
Q 013342 340 GGFWSHCGWN----STLECLCEGVPMIC-RPCFG--DQ-RVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 340 ~~~I~HgG~g----sv~eal~~GvP~v~-~P~~~--DQ-~~na~~v~~~~G~g~~~~~ 389 (445)
.+++.-.-.. .+.+++.+|+++++ -|+.. ++ ....+..++. |+-+.+..
T Consensus 69 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~-g~~~~v~~ 125 (330)
T 3e9m_A 69 DIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQ-GVFLMEAQ 125 (330)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHT-TCCEEECC
T ss_pred CEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCeEEEEE
Confidence 3366433333 25677888888765 24432 22 2233344443 65555543
No 122
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=27.13 E-value=36 Score=30.21 Aligned_cols=27 Identities=22% Similarity=0.332 Sum_probs=20.6
Q ss_pred CCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 6 SPFQGHMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 6 ~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
+|+.|-+- -.|++.|.++||+|+.++-
T Consensus 6 TGatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 6 GGGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp ETTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred ECCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 35555554 4688999999999999874
No 123
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=26.71 E-value=2.6e+02 Score=22.82 Aligned_cols=118 Identities=14% Similarity=0.024 Sum_probs=0.0
Q ss_pred CChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccCceeeccCchhHH
Q 013342 273 MDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVGGFWSHCGWNSTL 352 (445)
Q Consensus 273 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~~~I~HgG~gsv~ 352 (445)
..++.+.++++..++.+.++++...+. ...||.-+.....-.++=++ .....+ .|+-+++
T Consensus 61 Rtp~~l~~~~~~a~~~g~~ViIa~AG~-------aahLpGvvAa~T~~PVIGVP-------v~s~~l------~G~DsLl 120 (181)
T 4b4k_A 61 RTPDYMFEYAETARERGLKVIIAGAGG-------AAHLPGMVAAKTNLPVIGVP-------VQSKAL------NGLDSLL 120 (181)
T ss_dssp TSHHHHHHHHHHTTTTTCCEEEEEECS-------SCCHHHHHHTTCCSCEEEEE-------CCCTTT------TTHHHHH
T ss_pred cChHHHHHHHHHHHhcCceEEEEeccc-------cccchhhHHhcCCCCEEEEe-------cCCCCc------cchhhHH
Q ss_pred HHH--hhCCCcccCCcccchhhhHHHHHhhheeeeEeCc-ccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 013342 353 ECL--CEGVPMICRPCFGDQRVNARYVSHVWRTGLELEN-ELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEI 423 (445)
Q Consensus 353 eal--~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~ 423 (445)
..+ -.|+|+..+-+...-..||..++.. . .++.++|++++++--++ +++..++-.+.+
T Consensus 121 SivQMP~GvpVaTvaig~~ga~NAallA~q--------ILa~~d~~l~~kl~~~r~~-----~~~~v~~~~e~v 181 (181)
T 4b4k_A 121 SIVQMPGGVPVATVAIGKAGSTNAGLLAAQ--------ILGSFHDDIHDALELRREA-----IEKDVREGSELV 181 (181)
T ss_dssp HHHTCCTTCCCEECCSSHHHHHHHHHHHHH--------HHTTTCHHHHHHHHHHHHH-----HHHHHHHC----
T ss_pred HHHhCCCCCceEEEecCCccHHHHHHHHHH--------HHccCCHHHHHHHHHHHHH-----HHHHHHHhcccC
No 124
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=26.61 E-value=44 Score=26.45 Aligned_cols=22 Identities=23% Similarity=0.283 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhCCCeEEEEeCC
Q 013342 14 PMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 14 p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
-.+-++..|.++||+|++++++
T Consensus 24 ~~lYl~~~Lk~~G~~v~VA~np 45 (157)
T 1kjn_A 24 LAIYTSHKLKKKGFRVTVTANP 45 (157)
T ss_dssp HHHHHHHHHHHTTCEEEEEECH
T ss_pred HHHHHHHHHHhcCCeeEEecCH
Confidence 3678899999999999999885
No 125
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=26.60 E-value=1.2e+02 Score=23.36 Aligned_cols=34 Identities=6% Similarity=0.085 Sum_probs=24.4
Q ss_pred CceEEEEcCCCC--chHHHHHHh-------CCceEEEccchHH
Q 013342 101 QIACIIYDEIFY--FPEAAANQL-------NLQSIILRTTSAA 134 (445)
Q Consensus 101 ~~D~vv~D~~~~--~~~~~A~~~-------giP~v~~~~~~~~ 134 (445)
+||+||.|...+ -|..+++.. ++|++.++.....
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~ 99 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKR 99 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCH
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCH
Confidence 899999998773 466666654 5898887665433
No 126
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=26.47 E-value=74 Score=27.31 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=31.0
Q ss_pred CEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 013342 1 MVLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 1 il~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
|++...|+-|-..-++.+|..|.++|++|.++..+.
T Consensus 9 I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 9 VFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 356667899999999999999999999999887754
No 127
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=26.33 E-value=39 Score=31.72 Aligned_cols=61 Identities=10% Similarity=0.150 Sum_probs=40.5
Q ss_pred ccHHHHhhccccCceeeccCchhHHHHHhh----CC-CcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHH
Q 013342 328 APQKEVLSHVAVGGFWSHCGWNSTLECLCE----GV-PMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRR 402 (445)
Q Consensus 328 ~pq~~lL~~~~~~~~I~HgG~gsv~eal~~----Gv-P~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ 402 (445)
.+..++-..+++ +|+-||-||++.++.. ++ |++.|... . +|.=. +++.+++.+++.+
T Consensus 106 ~~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~-lGFLt----~~~~~~~~~al~~ 167 (388)
T 3afo_A 106 GPEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------T-LGFLS----PFDFKEHKKVFQE 167 (388)
T ss_dssp CCHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------S-CCSSC----CEEGGGHHHHHHH
T ss_pred cchhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------C-cccCC----cCChHHHHHHHHH
Confidence 344555667888 9999999999999654 56 68777531 2 22211 3445677777777
Q ss_pred HhcC
Q 013342 403 LMVG 406 (445)
Q Consensus 403 ll~~ 406 (445)
++++
T Consensus 168 il~g 171 (388)
T 3afo_A 168 VISS 171 (388)
T ss_dssp HHTT
T ss_pred HhcC
Confidence 7765
No 128
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=26.28 E-value=31 Score=28.66 Aligned_cols=49 Identities=10% Similarity=0.190 Sum_probs=31.8
Q ss_pred hhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcCCc----HHHHHHHHHHHHHHHHH
Q 013342 371 RVNARYVSHVWRTGLELENELEREVVEKAVRRLMVGEE----GEEMRQRAKNLKEEIEL 425 (445)
Q Consensus 371 ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~~~----~~~~~~~a~~l~~~~~~ 425 (445)
...+..-+.. |+|+. +|+|+|.++|.++++... -++|+ |.-.+-..+|+
T Consensus 102 id~~~Fe~~c-GVGV~----VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~ 154 (187)
T 3tl4_X 102 STKMGMNENS-GVGIE----ITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKN 154 (187)
T ss_dssp CCHHHHHHTT-TTTCC----CCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHT
T ss_pred CCHHHHHHHC-CCCeE----eCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhc
Confidence 3445555664 99987 588999999999996421 13455 55555555553
No 129
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=26.20 E-value=56 Score=25.46 Aligned_cols=23 Identities=9% Similarity=0.157 Sum_probs=20.9
Q ss_pred ChHHHHHHHHHHHhCCCeEEEEeC
Q 013342 11 HMTPMLQLGTILYSNGFSITVVHT 34 (445)
Q Consensus 11 H~~p~l~La~~L~~~Gh~Vt~~~~ 34 (445)
=+.|++++++.|.++|.+|+++ .
T Consensus 29 GiaPl~sm~~~l~~~~~~v~l~-g 51 (142)
T 3lyu_A 29 GIVEVYPIAKAWQEIGNDVTTL-H 51 (142)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEE-E
T ss_pred cHHHHHHHHHHHHhcCCcEEEE-E
Confidence 3789999999999999999998 5
No 130
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=26.14 E-value=58 Score=27.54 Aligned_cols=33 Identities=15% Similarity=0.080 Sum_probs=25.7
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
++--+|+.|-+. ...|.+.|.++|++|.++.++
T Consensus 8 llgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 8 TLAMTGASGAQY-GLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp EEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECc
Confidence 344455655555 889999999999999998884
No 131
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=26.05 E-value=2e+02 Score=28.53 Aligned_cols=27 Identities=15% Similarity=0.268 Sum_probs=22.6
Q ss_pred cCceeeccC------chhHHHHHhhCCCcccCC
Q 013342 339 VGGFWSHCG------WNSTLECLCEGVPMICRP 365 (445)
Q Consensus 339 ~~~~I~HgG------~gsv~eal~~GvP~v~~P 365 (445)
.+++++|.| .+.+.+|-+.++|+|++-
T Consensus 69 ~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 69 LGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 344899999 568899999999999984
No 132
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=25.77 E-value=70 Score=25.83 Aligned_cols=24 Identities=8% Similarity=0.245 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 12 MTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 12 ~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
..+...|++.|.++|.+|.|..++
T Consensus 40 Q~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 40 QHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCeEEEEecc
Confidence 467899999999999999999884
No 133
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=25.77 E-value=53 Score=24.27 Aligned_cols=34 Identities=9% Similarity=0.005 Sum_probs=24.7
Q ss_pred EEcCCCc--cChHHHHHHHHHHHhC-CC-eEEEEeCCC
Q 013342 3 LVPSPFQ--GHMTPMLQLGTILYSN-GF-SITVVHTHF 36 (445)
Q Consensus 3 ~~~~p~~--GH~~p~l~La~~L~~~-Gh-~Vt~~~~~~ 36 (445)
+++.+-+ ......+.+|..+.+. || +|+++....
T Consensus 7 i~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~d 44 (117)
T 1jx7_A 7 VANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD 44 (117)
T ss_dssp EECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGG
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEch
Confidence 4444433 4466679999999999 99 999877643
No 134
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=25.77 E-value=20 Score=27.91 Aligned_cols=62 Identities=19% Similarity=0.132 Sum_probs=35.8
Q ss_pred CCCcccCCcccchhhhHHHHHhhhe-eeeEeCcccCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 013342 358 GVPMICRPCFGDQRVNARYVSHVWR-TGLELENELEREVVEKAVRRLMVGEEGEEMRQRAKNLKEEIE 424 (445)
Q Consensus 358 GvP~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~t~~~l~~ai~~ll~~~~~~~~~~~a~~l~~~~~ 424 (445)
.+|+|++--..+.. ......+ .| +--.+.+.++.++|.++|++++.. ..+++..+++.+..+
T Consensus 79 ~~~ii~ls~~~~~~-~~~~~~~-~g~~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~~ 141 (154)
T 2rjn_A 79 DIERVVISGYADAQ-ATIDAVN-RGKISRFLLKPWEDEDVFKVVEKGLQL---AFLREENLRLQEETE 141 (154)
T ss_dssp TSEEEEEECGGGHH-HHHHHHH-TTCCSEEEESSCCHHHHHHHHHHHHHH---HHHHHHTTSCCC---
T ss_pred CCcEEEEecCCCHH-HHHHHHh-ccchheeeeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 67777765544433 3333344 25 544454468999999999999976 445444444433433
No 135
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=25.47 E-value=3.1e+02 Score=24.90 Aligned_cols=83 Identities=14% Similarity=0.107 Sum_probs=44.7
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhC-CCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcccc
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNS-KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAV 339 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~ 339 (445)
.+.+|.+|.+. ...+.++.+. +.+++.++..+ ++........++ .-+-...++|..+++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~-----------~~~~~~a~~~g~--~~~~~~~~ll~~~~~ 66 (359)
T 3e18_A 7 QLVIVGYGGMG-------SYHVTLASAADNLEVHGVFDIL-----------AEKREAAAQKGL--KIYESYEAVLADEKV 66 (359)
T ss_dssp EEEEECCSHHH-------HHHHHHHHTSTTEEEEEEECSS-----------HHHHHHHHTTTC--CBCSCHHHHHHCTTC
T ss_pred cEEEECcCHHH-------HHHHHHHHhCCCcEEEEEEcCC-----------HHHHHHHHhcCC--ceeCCHHHHhcCCCC
Confidence 47788888765 3455667666 34555555322 222111111222 234567788885554
Q ss_pred CceeeccCch----hHHHHHhhCCCccc
Q 013342 340 GGFWSHCGWN----STLECLCEGVPMIC 363 (445)
Q Consensus 340 ~~~I~HgG~g----sv~eal~~GvP~v~ 363 (445)
.+++--.... .+.+++.+|+++++
T Consensus 67 D~V~i~tp~~~h~~~~~~al~aGkhVl~ 94 (359)
T 3e18_A 67 DAVLIATPNDSHKELAISALEAGKHVVC 94 (359)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCCEEe
Confidence 4466433322 35667778887776
No 136
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=25.45 E-value=1.6e+02 Score=26.90 Aligned_cols=85 Identities=15% Similarity=0.082 Sum_probs=44.6
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhCC-CCEEEEECCCCCCCCCccCCchHHHHHHhcCCc-EEEEeccHHHHhhccc
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNSK-QPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENG-CIVKWAPQKEVLSHVA 338 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~-~~~~~~pq~~lL~~~~ 338 (445)
.+.+|.+|.+.. ..++.++.+.+ .+++.++..+ ++.. +...... ...-+-..+++|..++
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~-----------~~~~-~~~a~~~~~~~~~~~~~~ll~~~~ 68 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSD-----------LERA-RRVHRFISDIPVLDNVPAMLNQVP 68 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSS-----------HHHH-GGGGGTSCSCCEESSHHHHHHHSC
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCC-----------HHHH-HHHHHhcCCCcccCCHHHHhcCCC
Confidence 477788887642 23667777763 4666566332 1211 1111111 1223456778888775
Q ss_pred cCceeeccCch----hHHHHHhhCCCccc
Q 013342 339 VGGFWSHCGWN----STLECLCEGVPMIC 363 (445)
Q Consensus 339 ~~~~I~HgG~g----sv~eal~~GvP~v~ 363 (445)
+.+++-..... -+.+++.+|+++++
T Consensus 69 vD~V~i~tp~~~H~~~~~~al~aGkhVl~ 97 (359)
T 3m2t_A 69 LDAVVMAGPPQLHFEMGLLAMSKGVNVFV 97 (359)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCeEEE
Confidence 54466433322 24566777777665
No 137
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=25.39 E-value=2e+02 Score=28.40 Aligned_cols=28 Identities=14% Similarity=0.293 Sum_probs=22.9
Q ss_pred ccccCceeeccCch------hHHHHHhhCCCcccCC
Q 013342 336 HVAVGGFWSHCGWN------STLECLCEGVPMICRP 365 (445)
Q Consensus 336 ~~~~~~~I~HgG~g------sv~eal~~GvP~v~~P 365 (445)
++.+ +++|.|-| .+.||-+.++|+|++-
T Consensus 75 ~p~v--~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 75 KPGI--CIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp SCEE--EEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCEE--EEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 3444 89999965 7789999999999985
No 138
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=25.33 E-value=71 Score=23.22 Aligned_cols=47 Identities=6% Similarity=0.008 Sum_probs=33.4
Q ss_pred hCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 357 EGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 357 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
..+|+|++ ..+.........+ .|+--.+.+.++.++|.++|++++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLK-AHADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHST-TCCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHH-hCcchheeCCCCHHHHHHHHHHHHcC
Confidence 46888888 4444455555566 47755565568999999999998864
No 139
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=25.22 E-value=41 Score=30.52 Aligned_cols=22 Identities=5% Similarity=0.078 Sum_probs=19.0
Q ss_pred HHHHHHHHHhCCCeEEEEeCCC
Q 013342 15 MLQLGTILYSNGFSITVVHTHF 36 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~~~~ 36 (445)
-.++|+++.++|++||+++.+.
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHCCCEEEEEecCC
Confidence 4578999999999999999854
No 140
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=25.16 E-value=62 Score=27.07 Aligned_cols=33 Identities=12% Similarity=0.021 Sum_probs=25.6
Q ss_pred EEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSN-GFSITVVHTH 35 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~-Gh~Vt~~~~~ 35 (445)
++--+++.|-+. ...|.+.|.++ |++|.++.++
T Consensus 4 llgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 4 IVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp EEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred EEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 444455655555 89999999999 9999998874
No 141
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=25.13 E-value=3.6e+02 Score=23.90 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=54.7
Q ss_pred eEEEEecccccCChhhHHHHHHHHHhCC-CCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHh-hcccc
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVNSK-QPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVL-SHVAV 339 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL-~~~~~ 339 (445)
+.+|.+|.+. ..++.++.+.+ .+++.++..+ ++...+.........-+-...++| +.+|+
T Consensus 4 vgiiG~G~~g-------~~~~~~l~~~~~~~~~~v~d~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~ 65 (325)
T 2ho3_A 4 LGVIGTGAIS-------HHFIEAAHTSGEYQLVAIYSRK-----------LETAATFASRYQNIQLFDQLEVFFKSSFDL 65 (325)
T ss_dssp EEEECCSHHH-------HHHHHHHHHTTSEEEEEEECSS-----------HHHHHHHGGGSSSCEEESCHHHHHTSSCSE
T ss_pred EEEEeCCHHH-------HHHHHHHHhCCCeEEEEEEeCC-----------HHHHHHHHHHcCCCeEeCCHHHHhCCCCCE
Confidence 5677777664 34666676654 4555555322 222211111111122344567788 45555
Q ss_pred CceeeccCch----hHHHHHhhCCCcccC-Ccccch---hhhHHHHHhhheeeeEe
Q 013342 340 GGFWSHCGWN----STLECLCEGVPMICR-PCFGDQ---RVNARYVSHVWRTGLEL 387 (445)
Q Consensus 340 ~~~I~HgG~g----sv~eal~~GvP~v~~-P~~~DQ---~~na~~v~~~~G~g~~~ 387 (445)
++.-.... -+.+++.+|+++++= |+..+- ....+..++. |+-+.+
T Consensus 66 --V~i~tp~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~-g~~~~~ 118 (325)
T 2ho3_A 66 --VYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKN-NCFIFE 118 (325)
T ss_dssp --EEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHT-TCCEEE
T ss_pred --EEEeCChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHc-CCEEEE
Confidence 66544433 456779999998875 764332 2333444553 665554
No 142
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=25.11 E-value=73 Score=25.82 Aligned_cols=24 Identities=17% Similarity=0.178 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 12 MTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 12 ~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
..+...|++.|.++|.+|.|..++
T Consensus 39 Q~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 39 QYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCeEEEEecc
Confidence 468899999999999999999884
No 143
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=24.98 E-value=1.3e+02 Score=29.44 Aligned_cols=75 Identities=9% Similarity=-0.123 Sum_probs=42.6
Q ss_pred HHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEecc-HHH---------HhhccccCceeeccC
Q 013342 278 PEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAP-QKE---------VLSHVAVGGFWSHCG 347 (445)
Q Consensus 278 ~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p-q~~---------lL~~~~~~~~I~HgG 347 (445)
-+.+++.|++.|++.+..+.++ -...+.+.+.+.+..+.-.. |.+ +-..+.+ +++|.|
T Consensus 5 a~~l~~~L~~~GV~~vfg~PG~----------~~~~l~~al~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~~v--~~~tsG 72 (528)
T 1q6z_A 5 HGTTYELLRRQGIDTVFGNPGS----------NALPFLKDFPEDFRYILALQEACVVGIADGYAQASRKPAF--INLHSA 72 (528)
T ss_dssp HHHHHHHHHHTTCCEEEECCCG----------GGHHHHTTCCTTCEEEECSSHHHHHHHHHHHHHHHTSCEE--EEEEHH
T ss_pred HHHHHHHHHHCCCCEEEECCCc----------chHHHHHHHhhcCcEEEECcHHHHHHHHHHHHHHhCCCEE--EEEcCC
Confidence 3557777777888777766432 11222222222333332221 111 1233444 778887
Q ss_pred ch------hHHHHHhhCCCcccC
Q 013342 348 WN------STLECLCEGVPMICR 364 (445)
Q Consensus 348 ~g------sv~eal~~GvP~v~~ 364 (445)
-| .+++|-+.++|+|++
T Consensus 73 pG~~N~~~~l~~A~~~~~Pll~i 95 (528)
T 1q6z_A 73 AGTGNAMGALSNAWNSHSPLIVT 95 (528)
T ss_dssp HHHHHTHHHHHHHHHTTCCEEEE
T ss_pred hHHHHHHHHHHHHhhcCCCEEEE
Confidence 54 688999999999999
No 144
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=24.80 E-value=68 Score=24.72 Aligned_cols=47 Identities=2% Similarity=0.065 Sum_probs=34.0
Q ss_pred hCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhc
Q 013342 357 EGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMV 405 (445)
Q Consensus 357 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~ 405 (445)
..+|+|++--..+.. ...+..+ .|+--.+.+.++.++|.++|++++.
T Consensus 86 ~~ipvI~lTa~~~~~-~~~~~~~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKRE-QIIEAAQ-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHH-HHHHHHH-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHH-HHHHHHH-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 357888776555544 4455556 4887677667999999999999875
No 145
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=24.46 E-value=66 Score=24.44 Aligned_cols=29 Identities=21% Similarity=0.060 Sum_probs=20.2
Q ss_pred CceEEEEcCCCC--chHHHHHH---hCCceEEEc
Q 013342 101 QIACIIYDEIFY--FPEAAANQ---LNLQSIILR 129 (445)
Q Consensus 101 ~~D~vv~D~~~~--~~~~~A~~---~giP~v~~~ 129 (445)
+||+||.|...+ -|..+++. .++|+|.++
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 899999998763 35555554 468876643
No 146
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=23.77 E-value=3.9e+02 Score=23.77 Aligned_cols=107 Identities=10% Similarity=0.054 Sum_probs=56.9
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhC-CCCEEEEECCCCCCCCCccCCchHHHHHHhc-CCcEEEEeccHHHHhhccc
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNS-KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQ-ENGCIVKWAPQKEVLSHVA 338 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~~pq~~lL~~~~ 338 (445)
.+.+|..|.+. ..++.++.+. +.+++.++..+ ++...+... -++. +-...+++..++
T Consensus 5 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~-----------~~~~~~~~~~~~~~---~~~~~~~l~~~~ 63 (331)
T 4hkt_A 5 RFGLLGAGRIG-------KVHAKAVSGNADARLVAVADAF-----------PAAAEAIAGAYGCE---VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS-----------HHHHHHHHHHTTCE---ECCHHHHHHCTT
T ss_pred EEEEECCCHHH-------HHHHHHHhhCCCcEEEEEECCC-----------HHHHHHHHHHhCCC---cCCHHHHhcCCC
Confidence 36778888665 3466677765 44666566332 222111111 1222 667788888544
Q ss_pred cCceeeccC----chhHHHHHhhCCCccc-CCccc--ch-hhhHHHHHhhheeeeEeCc
Q 013342 339 VGGFWSHCG----WNSTLECLCEGVPMIC-RPCFG--DQ-RVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 339 ~~~~I~HgG----~gsv~eal~~GvP~v~-~P~~~--DQ-~~na~~v~~~~G~g~~~~~ 389 (445)
+.+++.--. .-.+.+++.+|+++++ -|+.. ++ ......+++ .|+-+.+..
T Consensus 64 ~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~-~g~~~~v~~ 121 (331)
T 4hkt_A 64 IDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSD-TKAKLMVGF 121 (331)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH-TTCCEEECC
T ss_pred CCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHH-cCCeEEEcc
Confidence 433654222 2346677888888776 35432 22 333444455 376666654
No 147
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=23.26 E-value=1.3e+02 Score=25.93 Aligned_cols=29 Identities=14% Similarity=0.025 Sum_probs=22.6
Q ss_pred CceEEEEcCCCC-------chHHHHHHhCCceEEEc
Q 013342 101 QIACIIYDEIFY-------FPEAAANQLNLQSIILR 129 (445)
Q Consensus 101 ~~D~vv~D~~~~-------~~~~~A~~~giP~v~~~ 129 (445)
+||+|++|.... .|..+.-.+|+|+|.+.
T Consensus 107 ~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 107 PPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp CCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred CCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 899999998662 24467778899999853
No 148
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=23.09 E-value=2e+02 Score=24.28 Aligned_cols=93 Identities=12% Similarity=0.009 Sum_probs=50.1
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHH-Hhhcccc
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKE-VLSHVAV 339 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~-lL~~~~~ 339 (445)
+...||-|.- ...+....++..+.+-+++=++.... .+.......-....++...+... ++..-+-
T Consensus 45 G~~vVsGGg~----~GiM~aa~~gAl~~GG~tiGVlP~~~---------~~~e~~~~~~~~~~~~~~f~~Rk~~~~~~sd 111 (215)
T 2a33_A 45 NIDLVYGGGS----IGLMGLVSQAVHDGGRHVIGIIPKTL---------MPRELTGETVGEVRAVADMHQRKAEMAKHSD 111 (215)
T ss_dssp TCEEEECCCS----SHHHHHHHHHHHHTTCCEEEEEESSC---------C--------CCEEEEESSHHHHHHHHHHTCS
T ss_pred CCEEEECCCh----hhHhHHHHHHHHHcCCcEEEEcchHh---------cchhhccCCCCceeecCCHHHHHHHHHHhCC
Confidence 3566665532 13666666666666666665553211 11111101112234556666533 4433333
Q ss_pred CceeeccCchhHHHHHh---------hCCCcccCCc
Q 013342 340 GGFWSHCGWNSTLECLC---------EGVPMICRPC 366 (445)
Q Consensus 340 ~~~I~HgG~gsv~eal~---------~GvP~v~~P~ 366 (445)
..++--||.||.-|... +++|++.+-.
T Consensus 112 a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 112 AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 36777899999988762 4899998875
No 149
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=22.93 E-value=83 Score=26.03 Aligned_cols=24 Identities=8% Similarity=0.245 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 12 MTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 12 ~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
..+...|++.|.++|.+|.|..++
T Consensus 63 Q~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 63 QHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHcCCeEEEEecc
Confidence 467889999999999999999884
No 150
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=22.93 E-value=1.7e+02 Score=26.53 Aligned_cols=109 Identities=16% Similarity=0.076 Sum_probs=55.4
Q ss_pred ceEEEEecccccCChhhHHHHHHHHHhC-CCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhcccc
Q 013342 261 SVIYVSLGSVASMDKKEPEEMAWGLVNS-KQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAV 339 (445)
Q Consensus 261 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~ 339 (445)
.+.+|..|.+. ..++.++.+. +..++.++..+. .-.+.+.+.. ++ ..+-...+++..+++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~--------~~~~~~~~~~--g~--~~~~~~~~~l~~~~~ 67 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTE--------DKREKFGKRY--NC--AGDATMEALLAREDV 67 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSH--------HHHHHHHHHH--TC--CCCSSHHHHHHCSSC
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCH--------HHHHHHHHHc--CC--CCcCCHHHHhcCCCC
Confidence 47788888765 3567778776 456666663320 0011121111 11 125567788855443
Q ss_pred CceeeccC----chhHHHHHhhCCCccc-CCccc--ch-hhhHHHHHhhheeeeEeCc
Q 013342 340 GGFWSHCG----WNSTLECLCEGVPMIC-RPCFG--DQ-RVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 340 ~~~I~HgG----~gsv~eal~~GvP~v~-~P~~~--DQ-~~na~~v~~~~G~g~~~~~ 389 (445)
.+++.--. .-.+.+++.+|+++++ -|+.. ++ .......++. |+-+.+..
T Consensus 68 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~-~~~~~v~~ 124 (354)
T 3db2_A 68 EMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKET-GVKFLCGH 124 (354)
T ss_dssp CEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHH-CCCEEEEC
T ss_pred CEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHc-CCeEEEee
Confidence 33553222 2345677888888775 25432 22 2333444453 66555543
No 151
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=22.56 E-value=47 Score=26.04 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=19.5
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 10 GHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 10 GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
|++- ..+++.|.++||+|+++...
T Consensus 12 G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 12 SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 5444 68899999999999999763
No 152
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=22.18 E-value=87 Score=25.99 Aligned_cols=24 Identities=17% Similarity=0.178 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 12 MTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 12 ~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
..+...|++.|.++|.+|.|..++
T Consensus 62 Q~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 62 QYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hHHHHHHHHHHHHCCCeEEEEeCc
Confidence 467889999999999999999884
No 153
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=22.05 E-value=1e+02 Score=25.46 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=25.8
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 2 VLVPSPFQGHMTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 2 l~~~~p~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
++.-+++.|-+ =...|.+.|.++|++|.++.++
T Consensus 5 llgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 5 ALCITGASGVI-YGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp EEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECh
Confidence 45556666644 5789999999999999998874
No 154
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=21.79 E-value=1.3e+02 Score=27.70 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=22.2
Q ss_pred ccccCceeeccC-chhHHHHHhhCCCcccCCcc
Q 013342 336 HVAVGGFWSHCG-WNSTLECLCEGVPMICRPCF 367 (445)
Q Consensus 336 ~~~~~~~I~HgG-~gsv~eal~~GvP~v~~P~~ 367 (445)
++|+ +|+|++ .+....+-..|+|.|.....
T Consensus 130 ~pDv--Vv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 130 RPDL--VVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp CCSE--EEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred CCCE--EEECchhhHHHHHHHHcCCCEEEeccc
Confidence 6887 888853 45556677899999987654
No 155
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=21.79 E-value=2.3e+02 Score=23.40 Aligned_cols=100 Identities=8% Similarity=-0.115 Sum_probs=54.6
Q ss_pred hchhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEecc
Q 013342 250 CISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAP 329 (445)
Q Consensus 250 l~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p 329 (445)
+-++|.++ ....|+-|.- ...+....++..+.+-+++=++...-. . .+.+.. .-+..+++++..
T Consensus 36 lg~~la~~---g~~lv~GGG~----~GlM~a~~~ga~~~GG~viGv~p~~l~-~----~e~~~~----~~~~~i~~~~~~ 99 (189)
T 3sbx_A 36 VGAAIAAR---GWTLVWGGGH----VSAMGAVSSAARAHGGWTVGVIPKMLV-H----RELADH----DADELVVTETMW 99 (189)
T ss_dssp HHHHHHHT---TCEEEECCBC----SHHHHHHHHHHHTTTCCEEEEEETTTT-T----TTTBCT----TCSEEEEESSHH
T ss_pred HHHHHHHC---CCEEEECCCc----cCHHHHHHHHHHHcCCcEEEEcCchhh-h----cccCCC----CCCeeEEcCCHH
Confidence 44566532 3455655532 137777777777777666655422100 0 001100 012234555554
Q ss_pred HH-H-HhhccccCceeeccCchhHHHHH---------hhCCCcccCCc
Q 013342 330 QK-E-VLSHVAVGGFWSHCGWNSTLECL---------CEGVPMICRPC 366 (445)
Q Consensus 330 q~-~-lL~~~~~~~~I~HgG~gsv~eal---------~~GvP~v~~P~ 366 (445)
.. . ++.+++. .++--||.||.-|.. .+++|++.+-.
T Consensus 100 ~Rk~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 100 ERKQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp HHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 43 2 4445554 567789999998874 36899998854
No 156
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=21.73 E-value=1.7e+02 Score=26.72 Aligned_cols=30 Identities=10% Similarity=0.082 Sum_probs=22.2
Q ss_pred ccccCceeec-cCchhHHHHHhhCCCcccCCcc
Q 013342 336 HVAVGGFWSH-CGWNSTLECLCEGVPMICRPCF 367 (445)
Q Consensus 336 ~~~~~~~I~H-gG~gsv~eal~~GvP~v~~P~~ 367 (445)
++|+ +|++ .+......+-..|+|.+.+-..
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECCS
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEecC
Confidence 6787 7776 5666667778899999887543
No 157
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=21.71 E-value=1.1e+02 Score=22.98 Aligned_cols=34 Identities=9% Similarity=-0.043 Sum_probs=26.3
Q ss_pred EEEcCCCccCh--HHHHHHHHHHHhCCCeEEEEeCC
Q 013342 2 VLVPSPFQGHM--TPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 2 l~~~~p~~GH~--~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
+++..+-+|+- .-.+.+|.++.+.||+|.++-..
T Consensus 6 ~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 6 FVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 45666777776 55688899999999999987764
No 158
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=21.52 E-value=4.3e+02 Score=23.42 Aligned_cols=62 Identities=15% Similarity=0.176 Sum_probs=34.0
Q ss_pred eccHHHHhhccccCceeeccCch----hHHHHHhhCCCcccC-Ccccc--h-hhhHHHHHhhheeeeEeCc
Q 013342 327 WAPQKEVLSHVAVGGFWSHCGWN----STLECLCEGVPMICR-PCFGD--Q-RVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 327 ~~pq~~lL~~~~~~~~I~HgG~g----sv~eal~~GvP~v~~-P~~~D--Q-~~na~~v~~~~G~g~~~~~ 389 (445)
+-...+++..+++.+++.-.... .+.+++.+|+++++= |+..+ + .......++. |+-+.+..
T Consensus 51 ~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~-g~~~~~~~ 120 (332)
T 2glx_A 51 VTSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREA-GVVLGTNH 120 (332)
T ss_dssp BSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH-TCCEEECC
T ss_pred cCCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHc-CCEEEEee
Confidence 33566778753333366544433 456788999988774 65432 2 2333444553 66665543
No 159
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=21.50 E-value=97 Score=29.75 Aligned_cols=80 Identities=14% Similarity=0.067 Sum_probs=47.6
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHHHHHHhcchHHHHHHHHHH
Q 013342 10 GHMTPMLQLGTILYSNGFSITVVHTHFNPPNPSNHPEFNFQSIPDGLTADDVSTGINILITNLLNVNCQAPFFECMVRMM 89 (445)
Q Consensus 10 GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 89 (445)
|.-.-.+.|++.|.+-|.+|..+.+........+.. .. .. +.. .+. .+++.++..
T Consensus 320 ~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~------------~~----~v-~~~--D~~-----~le~~i~~~- 374 (458)
T 3pdi_B 320 ADPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSP------------LP----SV-RVG--DLE-----DLEHAARAG- 374 (458)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTT------------SS----CE-EES--HHH-----HHHHHHHHH-
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCc------------cC----cE-EeC--CHH-----HHHHHHHhc-
Confidence 344456788899988999999877644222111110 00 00 001 121 133344444
Q ss_pred hhccCCCCCCCCceEEEEcCCCCchHHHHHHhCCceEEE
Q 013342 90 EQQQQHPAGDDQIACIIYDEIFYFPEAAANQLNLQSIIL 128 (445)
Q Consensus 90 ~~~~~~~~~~~~~D~vv~D~~~~~~~~~A~~~giP~v~~ 128 (445)
+||++|.+.. ...+|+++|||++.+
T Consensus 375 -----------~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 375 -----------QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp -----------TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred -----------CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 8999998854 567899999999974
No 160
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=21.50 E-value=1.8e+02 Score=24.44 Aligned_cols=31 Identities=3% Similarity=0.115 Sum_probs=21.2
Q ss_pred CceEEEEcCCC-CchHHHHHHhCCceEEEccc
Q 013342 101 QIACIIYDEIF-YFPEAAANQLNLQSIILRTT 131 (445)
Q Consensus 101 ~~D~vv~D~~~-~~~~~~A~~~giP~v~~~~~ 131 (445)
++|+||+-.+. .....+-+.....++.++++
T Consensus 80 ~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 80 GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 89999988765 44445556666667776554
No 161
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.47 E-value=51 Score=27.94 Aligned_cols=19 Identities=16% Similarity=0.245 Sum_probs=16.6
Q ss_pred HHHHHHHHHhCCCeEEEEe
Q 013342 15 MLQLGTILYSNGFSITVVH 33 (445)
Q Consensus 15 ~l~La~~L~~~Gh~Vt~~~ 33 (445)
-+.+|..|+++|++|+++=
T Consensus 14 GL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 14 GLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEE
Confidence 3788999999999999973
No 162
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=21.02 E-value=86 Score=26.27 Aligned_cols=34 Identities=18% Similarity=-0.057 Sum_probs=25.6
Q ss_pred EcCCCccChH-HHHHHHHHHHhCCCeEEEEeCCCCC
Q 013342 4 VPSPFQGHMT-PMLQLGTILYSNGFSITVVHTHFNP 38 (445)
Q Consensus 4 ~~~p~~GH~~-p~l~La~~L~~~Gh~Vt~~~~~~~~ 38 (445)
--+|+ +..+ =...|.+.|+++|++|.++.++.-.
T Consensus 13 giTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 13 GLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp ECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred EEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 33444 5555 6889999999999999999885433
No 163
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=20.76 E-value=1.5e+02 Score=27.68 Aligned_cols=25 Identities=24% Similarity=0.268 Sum_probs=17.4
Q ss_pred CceEEEEc--CCCCchHHHHHHhCCce
Q 013342 101 QIACIIYD--EIFYFPEAAANQLNLQS 125 (445)
Q Consensus 101 ~~D~vv~D--~~~~~~~~~A~~~giP~ 125 (445)
++|.|+.- .....+..+++.+|+|.
T Consensus 75 ~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 75 PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 88999853 22244556789999994
No 164
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=20.70 E-value=3.6e+02 Score=24.18 Aligned_cols=109 Identities=14% Similarity=0.080 Sum_probs=56.3
Q ss_pred eEEEEecccccCChhhHHHHHHHHHhCC-CCEEEEECCCCCCCCCccCCchHHHHHHhcCCcEEEEeccHHHHhhccccC
Q 013342 262 VIYVSLGSVASMDKKEPEEMAWGLVNSK-QPFLWVIRPSSNNAPEGIDLLPEVLAEAVQENGCIVKWAPQKEVLSHVAVG 340 (445)
Q Consensus 262 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~pq~~lL~~~~~~ 340 (445)
+.+|.+|.+. ..++.++.+.+ ..++.++..+ ++...+.........-+-...+++..+++.
T Consensus 5 vgiIG~G~~g-------~~~~~~l~~~~~~~l~av~d~~-----------~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D 66 (344)
T 3ezy_A 5 IGVIGLGRIG-------TIHAENLKMIDDAILYAISDVR-----------EDRLREMKEKLGVEKAYKDPHELIEDPNVD 66 (344)
T ss_dssp EEEECCSHHH-------HHHHHHGGGSTTEEEEEEECSC-----------HHHHHHHHHHHTCSEEESSHHHHHHCTTCC
T ss_pred EEEEcCCHHH-------HHHHHHHHhCCCcEEEEEECCC-----------HHHHHHHHHHhCCCceeCCHHHHhcCCCCC
Confidence 6778888665 34677776653 4566566332 222111111101112355677888844443
Q ss_pred ceeeccCch----hHHHHHhhCCCcccC-Cccc---chhhhHHHHHhhheeeeEeCc
Q 013342 341 GFWSHCGWN----STLECLCEGVPMICR-PCFG---DQRVNARYVSHVWRTGLELEN 389 (445)
Q Consensus 341 ~~I~HgG~g----sv~eal~~GvP~v~~-P~~~---DQ~~na~~v~~~~G~g~~~~~ 389 (445)
+++--.... .+.+++.+|+++++= |+.. |-....+..++. |+-+.+..
T Consensus 67 ~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~-g~~~~v~~ 122 (344)
T 3ezy_A 67 AVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKA-DVILFTGF 122 (344)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHH-TCCEEEEC
T ss_pred EEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHh-CCcEEEee
Confidence 366544433 366788889887753 5432 223334444553 66555543
No 165
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=20.69 E-value=2.5e+02 Score=22.68 Aligned_cols=48 Identities=15% Similarity=0.175 Sum_probs=33.0
Q ss_pred hCCCcccCCcccchhhhHHHHHhhheeeeEeCcccCHHHHHHHHHHHhcC
Q 013342 357 EGVPMICRPCFGDQRVNARYVSHVWRTGLELENELEREVVEKAVRRLMVG 406 (445)
Q Consensus 357 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~t~~~l~~ai~~ll~~ 406 (445)
.++|+|++--..|... ....-+ .|+--.+.+.++.++|.++|+.++..
T Consensus 75 ~~~~ii~ls~~~~~~~-~~~a~~-~Ga~~~l~Kp~~~~~L~~~i~~~~~~ 122 (208)
T 1yio_A 75 DGIPIVFITAHGDIPM-TVRAMK-AGAIEFLPKPFEEQALLDAIEQGLQL 122 (208)
T ss_dssp CCCCEEEEESCTTSCC-CHHHHH-TTEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHH-HHHHHH-CCCcEEEeCCCCHHHHHHHHHHHHhh
Confidence 3678777765555433 334445 37765666668999999999999875
No 166
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=20.36 E-value=1.1e+02 Score=28.47 Aligned_cols=42 Identities=17% Similarity=-0.047 Sum_probs=24.1
Q ss_pred chhhccCCCCceEEEEecccccCChhhHHHHHHHHHhCCCCEEE
Q 013342 251 ISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLW 294 (445)
Q Consensus 251 ~~wl~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~ 294 (445)
.+++...+.+.++.|+-+++. .....+.+.+.|++.+..+.+
T Consensus 23 ~~~~~~~g~~~~liVtd~~~~--~~g~~~~v~~~L~~~gi~~~~ 64 (383)
T 3ox4_A 23 IKDLNGSGFKNALIVSDAFMN--KSGVVKQVADLLKAQGINSAV 64 (383)
T ss_dssp HHTTTTSCCCEEEEEEEHHHH--HTTHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHcCCCEEEEEECCchh--hCchHHHHHHHHHHcCCeEEE
Confidence 344443333456666655432 223567788888888776643
No 167
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=20.20 E-value=1.4e+02 Score=26.11 Aligned_cols=31 Identities=10% Similarity=-0.091 Sum_probs=24.9
Q ss_pred CceEEEEcCCCC------chHHHHHHhCCceEEEccc
Q 013342 101 QIACIIYDEIFY------FPEAAANQLNLQSIILRTT 131 (445)
Q Consensus 101 ~~D~vv~D~~~~------~~~~~A~~~giP~v~~~~~ 131 (445)
+||+|++-.... .+..+|..+|+|.+...+.
T Consensus 112 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 112 APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 889999776442 6788999999999986553
No 168
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=20.14 E-value=80 Score=25.61 Aligned_cols=24 Identities=13% Similarity=0.203 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeCC
Q 013342 12 MTPMLQLGTILYSNGFSITVVHTH 35 (445)
Q Consensus 12 ~~p~l~La~~L~~~Gh~Vt~~~~~ 35 (445)
..+...|++.|.++|.+|.|..++
T Consensus 47 Q~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 47 QYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCeEEEEecc
Confidence 468899999999999999999884
Done!