Query 013344
Match_columns 445
No_of_seqs 250 out of 1835
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 08:49:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013344.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013344hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wu9_A 3-ketoacyl-COA thiolase 100.0 3.3E-69 1.1E-73 556.1 37.3 411 32-444 12-441 (442)
2 2iik_A 3-ketoacyl-COA thiolase 100.0 2.9E-65 1E-69 524.4 39.9 370 49-422 29-416 (418)
3 3goa_A 3-ketoacyl-COA thiolase 100.0 8.7E-65 3E-69 516.3 39.5 365 49-421 1-386 (387)
4 4dd5_A Acetyl-COA acetyltransf 100.0 2.4E-64 8.1E-69 514.7 40.8 364 48-421 5-396 (396)
5 3ss6_A Acetyl-COA acetyltransf 100.0 2.5E-64 8.6E-69 514.3 40.3 364 48-421 3-393 (394)
6 1ulq_A Putative acetyl-COA ace 100.0 1.2E-63 4E-68 510.4 40.9 365 49-422 1-400 (401)
7 3svk_A Acetyl-COA acetyltransf 100.0 2.9E-64 1E-68 515.1 35.5 363 49-421 6-406 (407)
8 1afw_A 3-ketoacetyl-COA thiola 100.0 1E-63 3.5E-68 509.2 36.9 359 49-421 9-392 (393)
9 4e1l_A Acetoacetyl-COA thiolas 100.0 2.7E-63 9.1E-68 506.9 39.0 365 48-421 3-395 (395)
10 2vu1_A Acetyl-COA acetyltransf 100.0 2.1E-62 7E-67 499.9 39.7 363 49-421 2-391 (392)
11 1wl4_A Acetyl-coenzyme A acety 100.0 3.2E-62 1.1E-66 499.2 40.6 364 49-422 5-397 (397)
12 1wdk_C 3-ketoacyl-COA thiolase 100.0 1.2E-61 4E-66 494.0 37.8 367 48-421 3-389 (390)
13 2ib8_A Acetyl-COA acetyltransf 100.0 2.7E-59 9.4E-64 477.3 37.0 362 48-421 6-394 (395)
14 4egv_A Acetyl-COA acetyltransf 100.0 5.3E-48 1.8E-52 405.4 20.4 347 50-407 18-407 (520)
15 4dfe_A 3-oxoacyl-[acyl-carrier 100.0 6.1E-29 2.1E-33 247.6 18.5 262 51-422 44-333 (333)
16 3il3_A 3-oxoacyl-[acyl-carrier 100.0 4.8E-28 1.6E-32 240.0 21.0 261 51-422 37-323 (323)
17 1e5m_A KAS II, beta ketoacyl a 100.0 3.9E-27 1.3E-31 241.5 25.8 248 76-397 78-365 (416)
18 4ewp_A 3-oxoacyl-[acyl-carrier 100.0 5.5E-28 1.9E-32 242.2 17.7 258 50-423 40-350 (350)
19 3gwa_A 3-oxoacyl-(acyl-carrier 100.0 1.2E-27 4E-32 241.2 19.6 264 51-422 59-365 (365)
20 3kzu_A 3-oxoacyl-(acyl-carrier 100.0 2E-26 6.8E-31 236.9 27.3 250 74-396 86-375 (428)
21 4efi_A 3-oxoacyl-(acyl-carrier 100.0 1.1E-27 3.8E-32 240.3 17.4 263 53-425 47-346 (354)
22 3s21_A 3-oxoacyl-[ACP] synthas 99.9 5.9E-27 2E-31 234.3 18.3 271 52-422 48-345 (345)
23 3ho9_A 3-oxoacyl-[acyl-carrier 99.9 1.5E-26 5.1E-31 237.9 21.2 248 75-396 88-375 (427)
24 3h78_A PQS biosynthetic enzyme 99.9 8.9E-27 3E-31 234.1 18.2 259 51-423 53-352 (359)
25 3o04_A LMO2201 protein, beta-k 99.9 1.1E-25 3.7E-30 230.5 25.1 249 74-396 73-360 (413)
26 1zow_A 3-oxoacyl-[acyl-carrier 99.9 1.9E-26 6.5E-31 227.2 17.7 257 58-422 35-311 (313)
27 1hnj_A Beta-ketoacyl-acyl carr 99.9 3.5E-26 1.2E-30 225.8 18.1 255 58-422 35-317 (317)
28 1j3n_A 3-oxoacyl-(acyl-carrier 99.9 9.1E-26 3.1E-30 230.7 21.2 250 74-396 70-358 (408)
29 1u6e_A 3-oxoacyl-[acyl-carrier 99.9 2.3E-26 8E-31 228.7 15.8 256 58-422 45-332 (335)
30 2gqd_A 3-oxoacyl-[acyl-carrier 99.9 4.4E-25 1.5E-29 227.5 24.6 249 74-397 97-385 (437)
31 3s3l_A CERJ; acyltransferase, 99.9 4.3E-26 1.5E-30 229.0 15.6 257 58-427 36-343 (357)
32 1mzj_A Beta-ketoacylsynthase I 99.9 6.2E-26 2.1E-30 226.3 16.0 257 58-423 44-332 (339)
33 3led_A 3-oxoacyl-acyl carrier 99.9 1.2E-25 4E-30 228.3 17.5 238 74-422 116-391 (392)
34 1u0m_A Putative polyketide syn 99.9 2.7E-26 9.1E-31 232.7 12.5 244 72-423 81-355 (382)
35 2x3e_A 3-oxoacyl-[acyl-carrier 99.9 1.1E-25 3.9E-30 223.6 16.5 258 58-424 38-325 (331)
36 2iwz_A 3-oxoacyl-[acyl-carrier 99.9 7.5E-25 2.6E-29 225.8 22.2 249 74-397 96-385 (438)
37 1ted_A PKS18; thiolase fold, s 99.9 2.4E-25 8.1E-30 226.5 18.1 250 73-423 111-391 (393)
38 1ub7_A 3-oxoacyl-[acyl-carrier 99.9 2.8E-25 9.7E-30 219.7 18.1 257 58-423 34-320 (322)
39 2h84_A Steely1; thiolase-fold, 99.9 1.1E-25 3.8E-30 227.4 15.4 244 73-423 93-373 (374)
40 1ox0_A Beta ketoacyl-acyl carr 99.9 5.6E-24 1.9E-28 218.8 27.5 246 75-397 93-377 (430)
41 2ebd_A 3-oxoacyl-[acyl-carrier 99.9 2.1E-25 7.3E-30 219.2 16.0 256 58-422 35-309 (309)
42 2gp6_A 3-oxoacyl-[acyl-carrier 99.9 9E-24 3.1E-28 217.4 28.8 245 75-397 99-384 (434)
43 3il6_A 3-oxoacyl-[acyl-carrier 99.9 9E-25 3.1E-29 216.3 19.9 258 51-421 32-320 (321)
44 1tqy_B Actinorhodin polyketide 99.9 6.8E-24 2.3E-28 217.3 26.8 242 74-396 78-360 (415)
45 2ix4_A 3-oxoacyl-[acyl-carrier 99.9 2.2E-24 7.4E-29 221.9 22.6 250 74-397 87-380 (431)
46 1tqy_A Beta-ketoacyl synthase/ 99.9 1.2E-24 4E-29 223.5 20.6 248 75-396 73-366 (424)
47 2wge_A 3-oxoacyl-[acyl-carrier 99.9 9.1E-24 3.1E-28 216.3 26.9 242 75-396 83-365 (416)
48 4ddo_A 3-oxoacyl-[acyl-carrier 99.9 8.5E-24 2.9E-28 218.7 26.6 248 74-396 101-390 (451)
49 3mqd_A Beta-ketoacyl synthase; 99.9 1E-23 3.5E-28 216.7 25.1 245 74-396 91-374 (428)
50 3ov2_A Curcumin synthase; type 99.9 2.5E-24 8.6E-29 218.7 18.6 247 74-423 101-387 (393)
51 3oit_A OS07G0271500 protein; t 99.9 1.3E-24 4.3E-29 220.5 15.8 243 74-422 95-381 (387)
52 4ewg_A Beta-ketoacyl synthase; 99.9 2.1E-23 7.3E-28 213.4 24.6 246 74-396 76-359 (412)
53 3euo_A Type III pentaketide sy 99.9 4.6E-24 1.6E-28 215.9 16.9 252 74-423 80-379 (379)
54 3e1h_A PKSIIINC, putative unch 99.9 1.6E-23 5.4E-28 216.3 19.1 251 76-424 111-409 (465)
55 3v7i_A Putative polyketide syn 99.9 5.6E-24 1.9E-28 216.8 15.5 254 52-422 118-412 (413)
56 2d3m_A Pentaketide chromone sy 99.9 8.7E-24 3E-28 215.9 15.7 246 73-423 113-403 (406)
57 1i88_A CHS2, chalcone synthase 99.9 3.6E-23 1.2E-27 210.2 18.2 243 73-423 100-387 (389)
58 3awk_A Chalcone synthase-like 99.9 3.6E-23 1.2E-27 210.9 16.9 246 73-423 113-400 (402)
59 2vba_A 3-oxoacyl-[acyl-carrier 99.9 5E-22 1.7E-26 202.8 24.3 245 74-397 70-354 (406)
60 2p0u_A Stilbenecarboxylate syn 99.9 2E-23 7E-28 213.4 13.5 246 73-423 118-405 (413)
61 3a5r_A Benzalacetone synthase; 99.9 2.7E-23 9.1E-28 211.0 13.6 252 73-423 96-383 (387)
62 2qo3_A Eryaii erythromycin pol 99.9 8.9E-22 3E-26 218.9 26.6 244 74-396 94-372 (915)
63 1ee0_A 2-pyrone synthase; poly 99.9 4.5E-23 1.5E-27 210.3 14.5 253 73-424 105-393 (402)
64 3tsy_A Fusion protein 4-coumar 99.9 1E-22 3.6E-27 229.4 17.9 253 75-424 689-975 (979)
65 1xes_A Dihydropinosylvin synth 99.9 1.9E-22 6.6E-27 206.2 17.9 242 74-423 124-410 (413)
66 2hg4_A DEBS, 6-deoxyerythronol 99.9 1.7E-21 5.8E-26 216.7 25.7 243 75-396 116-394 (917)
67 1xpm_A 3-hydroxy-3-methylgluta 99.9 9.3E-23 3.2E-27 207.5 6.4 264 58-430 35-327 (396)
68 3v4n_A HMG-COA synthase; hydro 99.9 2.5E-22 8.5E-27 203.4 6.3 254 59-427 41-330 (388)
69 3sqz_A Putative hydroxymethylg 99.8 6.4E-22 2.2E-26 202.2 6.6 254 59-427 70-360 (425)
70 2f82_A HMG-COA synthase; HMGS1 99.8 6.7E-21 2.3E-25 196.8 12.0 245 71-423 48-370 (450)
71 2v4w_A Hydroxymethylglutaryl-C 99.8 7.8E-21 2.7E-25 194.9 10.8 242 71-416 50-371 (460)
72 3hhd_A Fatty acid synthase; tr 99.8 1.7E-19 5.7E-24 201.5 22.1 239 75-396 80-353 (965)
73 3zen_D Fatty acid synthase; tr 99.8 2.5E-19 8.5E-24 216.0 21.0 249 75-396 2647-2953(3089)
74 2p8u_A Hydroxymethylglutaryl-C 99.8 1.2E-19 3.9E-24 188.5 10.7 258 59-422 58-396 (478)
75 3lma_A Stage V sporulation pro 99.8 1.2E-19 4.2E-24 178.0 9.3 237 72-414 52-312 (347)
76 2wya_A Hydroxymethylglutaryl-C 99.8 1.8E-19 6.2E-24 186.6 7.6 104 51-158 33-138 (460)
77 2uv8_A Fatty acid synthase sub 99.7 7.6E-17 2.6E-21 186.4 16.2 251 75-395 1211-1602(1887)
78 2uv9_A Fatty acid synthase alp 99.7 1.3E-15 4.4E-20 175.9 23.6 249 76-395 1187-1583(1878)
79 2pff_A Fatty acid synthase sub 99.6 1.7E-16 5.7E-21 178.3 8.1 251 75-396 1012-1404(1688)
80 2vz8_A Fatty acid synthase; tr 99.6 2.8E-15 9.7E-20 181.3 17.2 238 76-396 79-351 (2512)
81 4ewp_A 3-oxoacyl-[acyl-carrier 93.1 0.18 6.3E-06 49.2 7.6 78 321-407 67-149 (350)
82 3euo_A Type III pentaketide sy 88.7 0.79 2.7E-05 45.4 7.2 43 322-364 87-133 (379)
83 3v7i_A Putative polyketide syn 88.5 0.88 3E-05 45.7 7.5 43 321-363 142-188 (413)
84 3e1h_A PKSIIINC, putative unch 87.2 1.1 3.6E-05 45.8 7.2 44 321-364 115-162 (465)
85 3oit_A OS07G0271500 protein; t 86.4 1.1 3.8E-05 44.5 6.7 70 321-398 101-176 (387)
86 3ov2_A Curcumin synthase; type 86.4 1.2 4.2E-05 44.2 7.0 44 321-364 107-154 (393)
87 4efi_A 3-oxoacyl-(acyl-carrier 85.7 1.7 5.8E-05 42.4 7.6 42 321-362 71-117 (354)
88 3il6_A 3-oxoacyl-[acyl-carrier 85.5 1.6 5.4E-05 42.0 7.1 42 321-362 57-103 (321)
89 3h78_A PQS biosynthetic enzyme 85.4 1.8 6.3E-05 42.3 7.7 42 321-362 79-125 (359)
90 3il3_A 3-oxoacyl-[acyl-carrier 85.3 1.8 6.3E-05 41.6 7.5 41 321-361 63-108 (323)
91 3led_A 3-oxoacyl-acyl carrier 85.0 1.5 5.1E-05 43.6 6.9 69 321-398 122-195 (392)
92 3s21_A 3-oxoacyl-[ACP] synthas 84.8 2.6 9E-05 40.8 8.5 43 321-363 73-120 (345)
93 3tsy_A Fusion protein 4-coumar 84.6 2.4 8.2E-05 47.1 9.1 77 321-406 694-776 (979)
94 3awk_A Chalcone synthase-like 84.6 1.9 6.4E-05 43.0 7.4 43 321-363 120-166 (402)
95 4dfe_A 3-oxoacyl-[acyl-carrier 84.4 2.1 7.3E-05 41.2 7.6 43 321-363 70-117 (333)
96 3gwa_A 3-oxoacyl-(acyl-carrier 83.9 1.9 6.5E-05 42.3 7.0 43 321-363 85-132 (365)
97 1i88_A CHS2, chalcone synthase 83.4 2.3 7.9E-05 42.0 7.5 43 321-363 107-153 (389)
98 2p0u_A Stilbenecarboxylate syn 83.3 2.1 7.4E-05 42.7 7.2 43 321-363 125-171 (413)
99 3a5r_A Benzalacetone synthase; 83.3 1.9 6.3E-05 42.7 6.7 43 321-363 103-149 (387)
100 1ee0_A 2-pyrone synthase; poly 83.2 2 6.9E-05 42.7 7.0 43 321-363 112-158 (402)
101 4e1l_A Acetoacetyl-COA thiolas 82.8 3.3 0.00011 40.9 8.4 68 321-394 34-106 (395)
102 3lma_A Stage V sporulation pro 82.1 2.5 8.5E-05 41.2 6.9 41 321-361 60-102 (347)
103 4dd5_A Acetyl-COA acetyltransf 82.1 4.1 0.00014 40.3 8.7 69 321-395 36-109 (396)
104 3s3l_A CERJ; acyltransferase, 81.8 2.7 9.1E-05 41.1 7.1 42 321-362 59-106 (357)
105 2d3m_A Pentaketide chromone sy 81.6 2.5 8.7E-05 42.0 7.0 43 321-363 120-166 (406)
106 1xes_A Dihydropinosylvin synth 80.9 2.3 7.7E-05 42.5 6.3 43 321-363 130-176 (413)
107 2h84_A Steely1; thiolase-fold, 79.4 3.2 0.00011 40.5 6.8 42 322-363 101-146 (374)
108 3ss6_A Acetyl-COA acetyltransf 78.3 4.9 0.00017 39.7 7.8 69 321-395 34-107 (394)
109 1u0m_A Putative polyketide syn 77.8 4.5 0.00015 39.8 7.3 43 321-363 89-135 (382)
110 2wya_A Hydroxymethylglutaryl-C 74.9 5.8 0.0002 40.1 7.4 41 321-361 59-104 (460)
111 1ted_A PKS18; thiolase fold, s 74.2 5.7 0.00019 39.2 7.0 43 321-363 118-164 (393)
112 2gel_A Putative GRAM negative 74.2 2.9 9.9E-05 38.3 4.5 58 76-136 35-94 (231)
113 3goa_A 3-ketoacyl-COA thiolase 73.2 9 0.00031 37.7 8.1 68 321-394 32-106 (387)
114 1zow_A 3-oxoacyl-[acyl-carrier 72.9 7.3 0.00025 36.7 7.2 68 321-395 56-128 (313)
115 2ebd_A 3-oxoacyl-[acyl-carrier 72.9 7.9 0.00027 36.4 7.4 68 321-395 55-127 (309)
116 3r6m_A YEAZ, resuscitation pro 72.8 3.2 0.00011 37.6 4.3 30 76-105 36-65 (213)
117 2f82_A HMG-COA synthase; HMGS1 71.7 5.4 0.00018 40.3 6.2 40 321-360 57-101 (450)
118 1hnj_A Beta-ketoacyl-acyl carr 71.6 10 0.00035 35.8 7.9 68 321-395 56-128 (317)
119 2v4w_A Hydroxymethylglutaryl-C 71.4 5.2 0.00018 40.6 5.9 41 321-361 59-104 (460)
120 1ub7_A 3-oxoacyl-[acyl-carrier 71.0 6 0.0002 37.6 6.1 40 321-360 55-99 (322)
121 3svk_A Acetyl-COA acetyltransf 70.8 3.2 0.00011 41.3 4.2 69 321-395 37-112 (407)
122 2a6a_A Hypothetical protein TM 69.8 2.9 0.0001 38.0 3.3 59 75-136 45-105 (218)
123 1ulq_A Putative acetyl-COA ace 69.5 9.4 0.00032 37.7 7.3 69 321-395 31-105 (401)
124 1mzj_A Beta-ketoacylsynthase I 68.4 9.9 0.00034 36.4 7.1 42 321-362 65-111 (339)
125 1u6e_A 3-oxoacyl-[acyl-carrier 66.7 11 0.00039 35.8 7.1 41 321-361 66-111 (335)
126 3ho9_A 3-oxoacyl-[acyl-carrier 66.3 5.8 0.0002 39.6 5.1 78 77-156 292-376 (427)
127 2p8u_A Hydroxymethylglutaryl-C 65.5 9.4 0.00032 38.9 6.5 39 321-359 78-121 (478)
128 2x3e_A 3-oxoacyl-[acyl-carrier 64.8 7.8 0.00027 37.0 5.5 71 77-156 224-298 (331)
129 3kzu_A 3-oxoacyl-(acyl-carrier 63.0 16 0.00055 36.4 7.6 75 77-156 293-376 (428)
130 2iik_A 3-ketoacyl-COA thiolase 61.6 19 0.00065 35.7 7.9 69 321-395 60-133 (418)
131 2wu9_A 3-ketoacyl-COA thiolase 61.3 19 0.00064 36.2 7.7 69 321-395 60-134 (442)
132 1j3n_A 3-oxoacyl-(acyl-carrier 61.1 8.9 0.0003 37.9 5.3 78 77-156 275-359 (408)
133 1wl4_A Acetyl-coenzyme A acety 60.9 20 0.00067 35.3 7.7 69 321-395 35-108 (397)
134 2ivn_A O-sialoglycoprotein end 56.2 10 0.00036 36.4 4.6 28 77-104 49-76 (330)
135 2vu1_A Acetyl-COA acetyltransf 55.7 23 0.00079 34.7 7.2 69 321-395 32-105 (392)
136 1wdk_C 3-ketoacyl-COA thiolase 55.5 21 0.00072 35.0 6.9 69 321-395 35-110 (390)
137 1afw_A 3-ketoacetyl-COA thiola 55.0 29 0.001 34.0 7.9 69 321-395 40-117 (393)
138 2ib8_A Acetyl-COA acetyltransf 54.6 28 0.00095 34.1 7.6 69 321-395 37-110 (395)
139 1tqy_A Beta-ketoacyl synthase/ 51.6 24 0.00083 34.9 6.7 78 77-156 283-367 (424)
140 4ewg_A Beta-ketoacyl synthase; 49.0 19 0.00065 35.5 5.4 77 76-156 278-360 (412)
141 3eno_A Putative O-sialoglycopr 49.0 8.2 0.00028 37.3 2.6 29 76-104 53-81 (334)
142 1xho_A Chorismate mutase; sout 48.8 19 0.00066 30.2 4.4 51 82-136 56-106 (148)
143 4egv_A Acetyl-COA acetyltransf 48.4 44 0.0015 34.2 8.1 77 78-160 318-403 (520)
144 2iwz_A 3-oxoacyl-[acyl-carrier 48.0 29 0.001 34.6 6.6 78 77-156 301-385 (438)
145 1e5m_A KAS II, beta ketoacyl a 47.9 61 0.0021 31.8 8.9 18 322-339 83-100 (416)
146 3hhd_A Fatty acid synthase; tr 47.2 60 0.0021 36.0 9.5 80 76-157 268-355 (965)
147 4ddo_A 3-oxoacyl-[acyl-carrier 46.1 15 0.00053 36.8 4.2 78 78-157 309-392 (451)
148 2gqd_A 3-oxoacyl-[acyl-carrier 45.1 63 0.0021 32.1 8.6 18 322-339 104-121 (437)
149 1tqy_B Actinorhodin polyketide 44.4 19 0.00064 35.6 4.4 77 78-157 280-362 (415)
150 2qo3_A Eryaii erythromycin pol 44.2 91 0.0031 34.3 10.3 79 76-157 285-374 (915)
151 1ox0_A Beta ketoacyl-acyl carr 42.5 90 0.0031 30.8 9.2 18 322-339 99-116 (430)
152 2gp6_A 3-oxoacyl-[acyl-carrier 42.1 34 0.0012 34.0 6.0 79 77-157 302-385 (434)
153 1ufy_A Chorismate mutase; shik 40.8 31 0.001 28.1 4.3 51 82-136 26-77 (122)
154 1dbf_A Protein (chorismate mut 39.9 25 0.00086 28.8 3.7 52 82-136 27-78 (127)
155 3ven_A O-carbamoyltransferase 38.7 13 0.00043 38.8 2.1 28 319-346 51-78 (576)
156 3o04_A LMO2201 protein, beta-k 37.4 1.1E+02 0.0037 29.9 8.9 18 322-339 80-97 (413)
157 3onr_A Protein transport prote 35.8 14 0.00047 27.3 1.4 26 320-345 18-43 (72)
158 2hg4_A DEBS, 6-deoxyerythronol 34.9 97 0.0033 34.1 8.6 100 52-156 286-395 (917)
159 2cc6_A VNG1446H, dodecin; flav 34.4 14 0.00046 27.0 1.1 27 320-346 16-42 (68)
160 2w6k_A COBE; biosynthetic prot 33.9 60 0.0021 27.1 5.3 49 72-126 21-70 (145)
161 2ux9_A Dodecin; flavoprotein; 33.6 14 0.0005 26.9 1.2 26 320-345 18-43 (69)
162 3v4n_A HMG-COA synthase; hydro 33.0 19 0.00067 35.4 2.4 40 321-362 61-105 (388)
163 2vxa_A Dodecin; flavoprotein, 32.7 15 0.00052 27.0 1.2 26 320-345 19-44 (72)
164 3sqz_A Putative hydroxymethylg 32.7 18 0.00063 36.1 2.2 40 321-362 90-134 (425)
165 2yiz_A Dodecin; flavoprotein, 30.7 15 0.00052 26.8 0.9 27 320-346 18-44 (69)
166 2ix4_A 3-oxoacyl-[acyl-carrier 28.4 1.3E+02 0.0044 29.6 7.7 18 322-339 94-112 (431)
167 3zyy_X Iron-sulfur cluster bin 25.7 44 0.0015 35.1 3.6 43 322-364 519-562 (631)
168 3ven_A O-carbamoyltransferase 25.0 31 0.001 35.9 2.3 46 52-103 31-76 (576)
169 2gel_A Putative GRAM negative 23.3 47 0.0016 30.0 3.0 25 320-344 38-62 (231)
170 3mqd_A Beta-ketoacyl synthase; 23.3 1.3E+02 0.0045 29.6 6.6 18 322-339 98-115 (428)
171 2wge_A 3-oxoacyl-[acyl-carrier 22.7 33 0.0011 33.9 1.9 76 77-156 285-366 (416)
172 3eno_A Putative O-sialoglycopr 21.5 46 0.0016 31.9 2.7 25 321-345 57-81 (334)
No 1
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=100.00 E-value=3.3e-69 Score=556.12 Aligned_cols=411 Identities=87% Similarity=1.280 Sum_probs=344.5
Q ss_pred cccccCCcccccccCCCCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcc
Q 013344 32 SACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ 111 (445)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~ 111 (445)
.+.+.+++....+....|++|||||++||||+++.+|.++++++.+|+.+|+++||+++|+++++||.|++|++.++...
T Consensus 12 ~~~~~~~~~~~~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~ 91 (442)
T 2wu9_A 12 DDKMAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQ 91 (442)
T ss_dssp --------------CCGGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHH
T ss_pred cccccCCcccCCcchhcCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCC
Confidence 34455666667777778889999999999999854478999999999999999999999999999999999998775432
Q ss_pred cchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc-cch------hh----hhhhc
Q 013344 112 RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP-KVK------AF----EQAQN 174 (445)
Q Consensus 112 ~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~-~~~------~~----~~~~~ 174 (445)
++++++.++..+|++..+|+++|+++|+|+++||..|+++|++|+++++ + ++. .+. ++ .....
T Consensus 92 ~~~~a~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~ 171 (442)
T 2wu9_A 92 RASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQN 171 (442)
T ss_dssp HHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHH
T ss_pred CChHHHHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhcccccc
Confidence 4567888989999976799999999999999999999999999999998 2 211 000 00 00112
Q ss_pred cccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHH
Q 013344 175 CLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVS 254 (445)
Q Consensus 175 ~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e 254 (445)
...+|++++|+|+++||+|||++|.+++++|++|.+||.+|+|++||+|++++.++++.+.+...+++.|+++|+++|+|
T Consensus 172 ~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e 251 (442)
T 2wu9_A 172 CLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLA 251 (442)
T ss_dssp TTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHH
T ss_pred chhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHH
Confidence 23579999999999999999999999999999999999999999999999886544322222236789999999999999
Q ss_pred HHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCC
Q 013344 255 ELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQ 334 (445)
Q Consensus 255 ~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~ 334 (445)
+|.++||+|+++|++|.+|||+++|||+++||++++.|++++.+|++++.+++..+..|..++.++..+++++|+++||+
T Consensus 252 ~~~~~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~ 331 (442)
T 2wu9_A 252 SLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLE 331 (442)
T ss_dssp HHHTSCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCC
T ss_pred HHhcCCCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999988888888999999999999999999
Q ss_pred CCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC--CCCceeeEEEeeccc
Q 013344 335 LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--RDCRFGVISMCIGTG 412 (445)
Q Consensus 335 ~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~--~~~~~G~~~~~~G~G 412 (445)
++|||+||+|++|+.+++.+++.||++++++|++||++++|||+|++|++++++++++|+++. . ++|++++|+|+|
T Consensus 332 ~~DId~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~~~~--~~glas~~~GGG 409 (442)
T 2wu9_A 332 LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDC--RFGVVSMCIGTG 409 (442)
T ss_dssp GGGCCEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHCTTC--CEEEEEEEETTT
T ss_pred HHHCCEEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccCCCC--CEEEEEeecccc
Confidence 999999999999999999999999999999999999999999999999999999999999987 5 899999999999
Q ss_pred ceeEEEEEEccccccccccccccccccccccC
Q 013344 413 MGAAAVFERGDCADELCNVRKVESNNFLSKDV 444 (445)
Q Consensus 413 ~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (445)
++.+++|++.+.++.+.++++++..-++|||.
T Consensus 410 ~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (442)
T 2wu9_A 410 MGAAAVFERGDGVDELRNARKVEAQGLLSKDA 441 (442)
T ss_dssp EEEEEEEEECSHHHHHHTC-------------
T ss_pred hheEEEEEeccccccCCCccchhhcccccccC
Confidence 99999999999999999999999999999984
No 2
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=100.00 E-value=2.9e-65 Score=524.40 Aligned_cols=370 Identities=60% Similarity=0.977 Sum_probs=333.9
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|+++||+|+.||||+++++|.++++++.+|+.+|+++||+++|+++++||.|++|++++++. ++++++.++..+|++.+
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~-~~~~a~~~a~~lGl~~~ 107 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA-GAIMARIAQFLSDIPET 107 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTTCCTT
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccc-cccHHHHHHHHcCCCCC
Confidence 57899999999999987667888999999999999999999999999999999999887764 56788888889999767
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccc------------hhhhhhhccccchhHhHHHHHHHhC
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKV------------KAFEQAQNCLLPMGVTSENVAHRFG 191 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~------------~~~~~~~~~~~~mg~~ae~~a~~~g 191 (445)
+|+++|+++|+|+++||..|+++|++|++|++ +..+.. .......+...+|++++++++++||
T Consensus 108 ~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~g 187 (418)
T 2iik_A 108 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFG 187 (418)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTT
T ss_pred ceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhC
Confidence 99999999999999999999999999999998 211110 0011112344679999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCcccc
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 271 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~ 271 (445)
+|||++|.+++++|++|.+||.+|+|++||+|+++..++++ |+++.++++.|+.+|+.+|+|+|.++||+|+++|++|.
T Consensus 188 itre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~-~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~ 266 (418)
T 2iik_A 188 ISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTA 266 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTT-SCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCS
T ss_pred CCHHHHHHHHHHHHHHHHhChhcCccccceeeeeecccccc-CcccceeeecccCcCCCCCHHHHhhCCCcccCCCceee
Confidence 99999999999999999999999999999999987655543 33334678999999999999999999999999999999
Q ss_pred CCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 013344 272 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 351 (445)
Q Consensus 272 ~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~ 351 (445)
+|+++++|||+++||++++.|++++.+|++++.+++..+..|..++.++..+++++|+++||+++|||+||+|++|+.+.
T Consensus 267 ~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~ 346 (418)
T 2iik_A 267 GNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQA 346 (418)
T ss_dssp TTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHH
T ss_pred ccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHH
Confidence 99999999999999999999999999999999999988888888999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCc-eeeEEEeecccceeEEEEEEc
Q 013344 352 VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCR-FGVISMCIGTGMGAAAVFERG 422 (445)
Q Consensus 352 ~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~-~G~~~~~~G~G~~~a~~l~~~ 422 (445)
+..++.||++++++|++||++++|||+|+||++++++++++|+++++ + +|++++|+|+|++.+++|++.
T Consensus 347 ~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~~--~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 347 AYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGK--RAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp HHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTS--CEEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcCC--CeeeEEEEeeccchhheEEEecc
Confidence 99999999999999999999999999999999999999999999887 7 999999999999999999975
No 3
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=100.00 E-value=8.7e-65 Score=516.29 Aligned_cols=365 Identities=43% Similarity=0.642 Sum_probs=331.0
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~A-gi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
|++|+|||++||||+++.+|.+++.++.+|+.+|+++||+++ ||+|++||.+++|++++++.+++++++.++..+|++.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 678999999999999865488999999999999999999999 9999999999999998887556788999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCcc---c--------hhhhhhhccccchhHhHHHHHHHhC
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPK---V--------KAFEQAQNCLLPMGVTSENVAHRFG 191 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~---~--------~~~~~~~~~~~~mg~~ae~~a~~~g 191 (445)
.+|+++|+++|+|+++||.+|+++|++|+++++ +..+. . .+..... ...+||+++++|+++||
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~-~~~~~g~~a~~~~~~~g 159 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAK-AAGMMGLTAEMLSRLHG 159 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC--------CCCHHHHHHHHHHTT
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCccccccccc-ccccHHHHHHHHHHHhC
Confidence 899999999999999999999999999999999 21111 0 0000011 14579999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC-CCccc
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTT 270 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~-~G~~t 270 (445)
++||++|.+++++|++|.+|+.+|+|++||+|++++.+. | +..+++.|+.+|+++|+|+|.+++|+|++ +|++|
T Consensus 160 ~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~---~--~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t 234 (387)
T 3goa_A 160 ISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDAD---G--VLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVT 234 (387)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTT---S--CEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeecccc---C--cccccccccccCCCCCHHHHhcCCCcccCCCCcee
Confidence 999999999999999999999999999999999886432 2 22578999999999999999999999999 99999
Q ss_pred cCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH
Q 013344 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 350 (445)
Q Consensus 271 ~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~ 350 (445)
.+|+|+++||++++||++++.|++++.++++++.+++.....|..++.++..+++++|+++||+++|||++|+||+|+.+
T Consensus 235 ~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~~ 314 (387)
T 3goa_A 235 AGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQ 314 (387)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHH
T ss_pred cccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchHH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC---CCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 351 FVYCRNKLGL---DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 351 ~~~~~e~LGl---~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
.+.+.+.||+ ...|+|++||++++|||+|++|++++++++++|+++++ ++|++++|+|+|++.+++|++
T Consensus 315 ~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 315 ILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDA--QFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp HHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhcCC--CEEEEEeccCcCceEEEEEEe
Confidence 9999999999 55689999999999999999999999999999999877 999999999999999999986
No 4
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=100.00 E-value=2.4e-64 Score=514.70 Aligned_cols=364 Identities=40% Similarity=0.634 Sum_probs=330.2
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
+|++|||||++||||+++ .|.++++++.+|+.+|+++||+++|++++|||.+++|++++++. ++++++.++..+|++.
T Consensus 5 ~m~~v~Ivg~~rT~~~~~-~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~-~~~~a~~v~~~lGl~~ 82 (396)
T 4dd5_A 5 NMREVVIASAARTAVGSF-GGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL-GQNIARQIALGAGIPV 82 (396)
T ss_dssp -CCCEEEEEEEECCCEET-TSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCT
T ss_pred cCCcEEEEEcccCCeeec-CCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCC-CchHHHHHHHHcCCCC
Confidence 478999999999999985 46889999999999999999999999999999999999988875 6789999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cch---hh--------------hh---hhccccch
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KVK---AF--------------EQ---AQNCLLPM 179 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~~---~~--------------~~---~~~~~~~m 179 (445)
++|+++|+++|+|+++||..|+++|++|.++++ + ++. ... .+ .+ .+.....|
T Consensus 83 ~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (396)
T 4dd5_A 83 EKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHM 162 (396)
T ss_dssp TSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEH
T ss_pred CceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchH
Confidence 799999999999999999999999999999998 1 111 100 00 00 01112479
Q ss_pred hHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcC
Q 013344 180 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 259 (445)
Q Consensus 180 g~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~ 259 (445)
++++++|+++||+|||++|.+++++|++|.+|+.+|+|++||+||+++.++ | ..++++|+++|+++|+|+|.++
T Consensus 163 ~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~---~---~~~~~~d~~~r~~~t~e~l~~~ 236 (396)
T 4dd5_A 163 GITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRK---G---DTVVDKDEYIKPGTTMEKLAKL 236 (396)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----------CEEECSCSCCCTTCCHHHHHHC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCC---C---ceeecCcccccCCCCHHHHhhC
Confidence 999999999999999999999999999999999999999999999875432 2 2678999999999999999999
Q ss_pred CCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 013344 260 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 260 ~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID 339 (445)
+|+|+|+|++|.+|+|+++||++++||++++.|++++.++++++.+++.....|..++.++..+++++|+++|++++|||
T Consensus 237 ~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 316 (396)
T 4dd5_A 237 RPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDID 316 (396)
T ss_dssp CBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCS
T ss_pred CCccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999988888888899999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEE
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l 419 (445)
+||+||+|+...+.+.+.||++++++|++||++++|||+|++|++++++++++|+++++ ++|++++|+|+|++.+++|
T Consensus 317 ~ve~~d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~ 394 (396)
T 4dd5_A 317 LVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDA--KTGLATLCIGGGMGTTLIV 394 (396)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--SEEEEEEEETTTEEEEEEE
T ss_pred EEEecChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEcccCCceeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999988 9999999999999999999
Q ss_pred EE
Q 013344 420 ER 421 (445)
Q Consensus 420 ~~ 421 (445)
++
T Consensus 395 e~ 396 (396)
T 4dd5_A 395 KR 396 (396)
T ss_dssp EC
T ss_pred eC
Confidence 85
No 5
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=2.5e-64 Score=514.27 Aligned_cols=364 Identities=40% Similarity=0.662 Sum_probs=332.9
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
.|++|+|||++||||+++ .|.++++++.+|+.+|+++||+++|++|++||.+++|++++++. ++++++.++..+|++.
T Consensus 3 ~m~~v~Ivg~~rT~~~~~-~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~-~~~~a~~i~~~lGl~~ 80 (394)
T 3ss6_A 3 AMHNVVITAAVRSPIGTF-GGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD-EANTARTAALAAGFPD 80 (394)
T ss_dssp CCCCEEEEEEEECCCEET-TSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGG-GCSHHHHHHHHTTCCT
T ss_pred CCceEEEEEcccCCcccc-CCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCc-cchHHHHHHHHcCCCC
Confidence 378999999999999985 47889999999999999999999999999999999999998874 7789999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cch---hh----------------hhhhccccchh
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KVK---AF----------------EQAQNCLLPMG 180 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~~---~~----------------~~~~~~~~~mg 180 (445)
++|+++|+++|+|++++|..|+++|++|.++++ + ++. ... .+ ...+....+||
T Consensus 81 ~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 160 (394)
T 3ss6_A 81 TVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMG 160 (394)
T ss_dssp TCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHH
T ss_pred CceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHH
Confidence 799999999999999999999999999999998 1 111 100 00 00112245799
Q ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCC
Q 013344 181 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 260 (445)
Q Consensus 181 ~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~ 260 (445)
+++++|+++||+|||++|.+++++|++|.+||++|+|++||+|++++.++ | ..++++|+++|+++|+|++.+++
T Consensus 161 ~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~---~---~~~~~~d~~~R~~~t~e~~~~~~ 234 (394)
T 3ss6_A 161 ETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERR---K---EVVFSKDEHPRADITAEKLAGLK 234 (394)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSS---C---EEEECSCCCCCTTCCHHHHHTCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCC---C---ceeecccccccCCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999886432 2 25789999999999999999999
Q ss_pred CcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 013344 261 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 261 p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~ 340 (445)
|+|+|+|++|.+|+|+++||++++||++++.|++++.++++++.+++.....|..++.++..+++++|+++|++++|||+
T Consensus 235 pvf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ 314 (394)
T 3ss6_A 235 PAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADL 314 (394)
T ss_dssp BSSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSE
T ss_pred CccCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999988888889999999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEE
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~ 420 (445)
+|+||+|+.....+.+.||++++++|++||++++|||.|++|++++++++++|++++. ++|++++|+|+|++.+++|+
T Consensus 315 ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e 392 (394)
T 3ss6_A 315 LEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGL--EKGIASLCVGGGIGVALFIE 392 (394)
T ss_dssp EEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEETTTEEEEEEEE
T ss_pred EEeCCchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccCcCceeEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999987 99999999999999999998
Q ss_pred E
Q 013344 421 R 421 (445)
Q Consensus 421 ~ 421 (445)
+
T Consensus 393 ~ 393 (394)
T 3ss6_A 393 A 393 (394)
T ss_dssp E
T ss_pred c
Confidence 7
No 6
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=1.2e-63 Score=510.44 Aligned_cols=365 Identities=43% Similarity=0.657 Sum_probs=326.2
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||||++||||+++ .|.++++++.+|+.+|+++||+++|+++++||.|++|++.+++.++++++..++..+|++.+
T Consensus 1 m~~v~Ivg~~rT~~~~~-~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 79 (401)
T 1ulq_A 1 MPEAWIVEAVRTPIGKH-GGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVE 79 (401)
T ss_dssp --CEEEEEEEECCCEET-TSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTT
T ss_pred CCceEEEEcccCCcccc-CCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCC
Confidence 56899999999999985 57889999999999999999999999999999999999887754356789999999999767
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--ccch------------hhhh---------hh--cc--
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PKVK------------AFEQ---------AQ--NC-- 175 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~~~------------~~~~---------~~--~~-- 175 (445)
+|+++++++|+|+++||..|+++|++|++|++ + ++ +... .+.+ .. +.
T Consensus 80 ~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~ 159 (401)
T 1ulq_A 80 VAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYG 159 (401)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSC
T ss_pred ccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccc
Confidence 99999999999999999999999999999998 2 21 1100 0000 00 11
Q ss_pred ccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHH
Q 013344 176 LLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE 255 (445)
Q Consensus 176 ~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~ 255 (445)
..+|++++++|+++||+|||++|.++++||++|.+||.+|+|++||+|++++.++ | .+++++|+++|+++|+|+
T Consensus 160 ~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~---~---~~~~~~d~~~r~~~t~e~ 233 (401)
T 1ulq_A 160 TESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGK---E---EILVEQDEGPRRDTSLEK 233 (401)
T ss_dssp CCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT---E---EEEECSCSCCCTTCCHHH
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCC---C---ceeeccccccCCCCCHHH
Confidence 2458999999999999999999999999999999999999999999999875432 2 257899999999999999
Q ss_pred HhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCC
Q 013344 256 LAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQL 335 (445)
Q Consensus 256 l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~ 335 (445)
|.++||+|+++|++|.+|||+++|||+++||++++.|++++.++++++.+++.....|..++.++..+++++|+++|+++
T Consensus 234 ~~~~rpif~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~ 313 (401)
T 1ulq_A 234 LAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSF 313 (401)
T ss_dssp HHHSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCG
T ss_pred HhhCCCccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999999999999999999999999888888889999999999999999999
Q ss_pred CCccEEEecCCChHHHHHHHHHcCC--CCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccc
Q 013344 336 DDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGM 413 (445)
Q Consensus 336 ~DID~~e~h~~~~~~~~~~~e~LGl--~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~ 413 (445)
+|||+||+||+|+.+.+.++|.||+ +.+|+|++||++++|||+|++|++++++++++|++++. ++|++++|.|+|+
T Consensus 314 ~dId~ie~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~ 391 (401)
T 1ulq_A 314 SDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQ 391 (401)
T ss_dssp GGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTE
T ss_pred HHcCEEEEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhcCC--CEEEEEeecCCcc
Confidence 9999999999999999999999999 55789999999999999999999999999999999877 9999999999999
Q ss_pred eeEEEEEEc
Q 013344 414 GAAAVFERG 422 (445)
Q Consensus 414 ~~a~~l~~~ 422 (445)
+.+++|++.
T Consensus 392 ~~a~v~~~~ 400 (401)
T 1ulq_A 392 GIAVVVEGM 400 (401)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEeC
Confidence 999999873
No 7
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=100.00 E-value=2.9e-64 Score=515.08 Aligned_cols=363 Identities=37% Similarity=0.598 Sum_probs=311.8
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~-Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
+++|||||++||||+|++.|.++++++.+|+.+|+++||++ +||+|+|||.+++|+++++..+++++++.++..+|+|.
T Consensus 6 ~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~ 85 (407)
T 3svk_A 6 SEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPE 85 (407)
T ss_dssp -CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCT
T ss_pred CCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCC
Confidence 36899999999999976678999999999999999999999 99999999999999998876445678999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCcc---ch---hh-----hhhhccccchhHhHHHHHHHhC
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPK---VK---AF-----EQAQNCLLPMGVTSENVAHRFG 191 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~---~~---~~-----~~~~~~~~~mg~~ae~~a~~~g 191 (445)
.+|+++|+++|+|++++|..|+++|++|+++++ +..+. .. .+ ........+||+++|+++++|+
T Consensus 86 ~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~ 165 (407)
T 3svk_A 86 TTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEG 165 (407)
T ss_dssp TCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred CCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhC
Confidence 899999999999999999999999999999998 21111 00 00 0112233579999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCcc--
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT-- 269 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~-- 269 (445)
++||++|.|++.+|++|..+.++|+|++||+|++.+ + | ..++++|+++|+++|+|+|.+++|+|+|+|.+
T Consensus 166 i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~----~-g---~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~ 237 (407)
T 3svk_A 166 FSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQ----N-G---LVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGG 237 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECT----T-S---CEEECSCTTCCTTCCHHHHHTSCBSCC-------
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecC----C-C---ceeeCCccccCCCCCHHHHhhCCCeecCCCcccc
Confidence 999999999999999999999999999999999732 1 2 25688999999999999999999999987764
Q ss_pred -------------------ccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHH
Q 013344 270 -------------------TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKS 330 (445)
Q Consensus 270 -------------------t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~ 330 (445)
|.+|||+++||++++||++++.|++++.++++++.+++..+.+|..++.++..+++++|++
T Consensus 238 ~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~ 317 (407)
T 3svk_A 238 FDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPATRKVLDR 317 (407)
T ss_dssp ------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888888999999999999999
Q ss_pred cCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeec
Q 013344 331 AGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIG 410 (445)
Q Consensus 331 aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G 410 (445)
+||+++|||+||+||+|+.+.+.+.+.||++++++|++||++++|||+|++|+++++++++||++++. ++|++++|+|
T Consensus 318 Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~g 395 (407)
T 3svk_A 318 AGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERRNA--RRALITLCIG 395 (407)
T ss_dssp HTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHHTC--CEEEEEEECS
T ss_pred cCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 9999999999
Q ss_pred ccceeEEEEEE
Q 013344 411 TGMGAAAVFER 421 (445)
Q Consensus 411 ~G~~~a~~l~~ 421 (445)
+|++.+++|++
T Consensus 396 gG~g~a~~~e~ 406 (407)
T 3svk_A 396 GGMGVATIIER 406 (407)
T ss_dssp SSCEEEEEEEE
T ss_pred CcceEEEEEEc
Confidence 99999999987
No 8
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=100.00 E-value=1e-63 Score=509.24 Aligned_cols=359 Identities=51% Similarity=0.818 Sum_probs=322.5
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcC----CCCCCCCcEEEEeccCCCcccchHHHHHHHHcC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN----VDPSEVGDIVVGTVLAPGSQRASECRMAAFYAG 124 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Ag----i~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lG 124 (445)
|++|||||++||||+++++|.++++++.+|+.+|+++||+++| |++++||.|++|++.+++. ++++++.++..+|
T Consensus 9 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~-~~~~a~~va~~lG 87 (393)
T 1afw_A 9 PEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAACLASG 87 (393)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHcC
Confidence 4889999999999998535789999999999999999999999 9999999999999887764 5678899999999
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc-cchh----------h---hhhhccccchhHhHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP-KVKA----------F---EQAQNCLLPMGVTSE 184 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~-~~~~----------~---~~~~~~~~~mg~~ae 184 (445)
++.++|+++|+++|+|+++||..|+++|++|++|++ + ++. .+.. + ...+....+|+++++
T Consensus 88 l~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~ 167 (393)
T 1afw_A 88 IPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNE 167 (393)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHH
T ss_pred CCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHH
Confidence 976799999999999999999999999999999998 1 111 0000 0 001112356999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCccc
Q 013344 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 264 (445)
Q Consensus 185 ~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~ 264 (445)
+|+++||+|||++|.+++++|++|.+||++|+|++||+|++++. | + ++++|+.+|+++|+|+|.++||+|+
T Consensus 168 ~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~-----~---~-~~~~d~~~r~~~t~e~~~~~rpvf~ 238 (393)
T 1afw_A 168 NVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD-----G---S-ICQSDEGPRPNVTAESLSSIRPAFI 238 (393)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT-----S---C-EECSCSSCCSCCCHHHHHHCCBSCC
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC-----C---c-eeccccccCCCCCHHHHhcCCCccc
Confidence 99999999999999999999999999999999999999997632 2 1 6899999999999999999999998
Q ss_pred CC-CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 013344 265 KD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343 (445)
Q Consensus 265 ~~-G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~ 343 (445)
++ |++|.+|+|+++|||+++||++++.|++++.++++++.+++..+..|..++.++..+++++|+++||+++|||+||+
T Consensus 239 ~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~ 318 (393)
T 1afw_A 239 KDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEI 318 (393)
T ss_dssp ---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred CCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 88 99999999999999999999999999999999999999999988888888889999999999999999999999999
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 344 h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
|++|+.+.+.+++.||++++++|++||++++|||+|++|++++++++++|+++++ |++++|+|+|++.+++|++
T Consensus 319 h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~----gl~~~c~ggg~g~a~~~~~ 392 (393)
T 1afw_A 319 NEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQI----GVVSMCIGTGMGAAAIFIK 392 (393)
T ss_dssp CCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTCE----EEEEEEETTTEEEEEEEEE
T ss_pred eccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcCC----cEEEEeecccceEEEEEEe
Confidence 9999999999999999999999999999999999999999999999999987643 9999999999999999987
No 9
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=100.00 E-value=2.7e-63 Score=506.93 Aligned_cols=365 Identities=41% Similarity=0.641 Sum_probs=331.7
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
.|++|||||++||||+++ .|.++++++.+|+.+|+++||+++|++|++||.+++|++++++. ++++++.++..+|++.
T Consensus 3 ~m~~v~Ivg~~rT~~g~~-~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~-~~~~a~~~~~~lGl~~ 80 (395)
T 4e1l_A 3 AMKDVVIVSAVRTPIGSF-GGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL-GQNVARQIAINAGIPN 80 (395)
T ss_dssp CCCCEEEEEEEECCCEET-TSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSST-TCCHHHHHHHHTTCCT
T ss_pred CCCeEEEEECccCCcccc-CCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cchHHHHHHHHcCCCC
Confidence 478999999999999985 57889999999999999999999999999999999999988775 6789999999999987
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cch---hh--------------hh---hhccccch
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KVK---AF--------------EQ---AQNCLLPM 179 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~~---~~--------------~~---~~~~~~~m 179 (445)
++|+++|+++|+|++++|..|+++|++|.++++ + ++. ... .+ .+ .+.....|
T Consensus 81 ~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T 4e1l_A 81 SVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHM 160 (395)
T ss_dssp TSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHH
T ss_pred CceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchH
Confidence 899999999999999999999999999999998 2 211 000 00 00 01112468
Q ss_pred hHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcC
Q 013344 180 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 259 (445)
Q Consensus 180 g~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~ 259 (445)
|+++++|+++||++||++|.+++++|++|.+|+.+|+|++||+||+++.++ | +..++++|+.+|+++|+|+|.++
T Consensus 161 g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~---g--~~~~~~~d~~~r~~~t~e~l~~~ 235 (395)
T 4e1l_A 161 GITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRR---G--KIETIDKDEYPKLGMTFEGLSKL 235 (395)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEET---T--EEEEECSCSCCCTTCCHHHHHHC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCC---C--cceEECCccccCCCCCHHHHhhC
Confidence 999999999999999999999999999999999999999999999876532 1 12468899999999999999999
Q ss_pred CCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 013344 260 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 260 ~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID 339 (445)
+|+|+++|++|.+|+|+++||++++||++++.|++++.++++++.+++.....|..++.++..+++++|+++|++++|||
T Consensus 236 ~~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId 315 (395)
T 4e1l_A 236 KPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDID 315 (395)
T ss_dssp CBSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCS
T ss_pred CCccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999998888888999999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEE
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l 419 (445)
+||+||+|+.....+.+.||++++++|++||++++|||+|++|++++++++++|++++. ++|++++|+|+|++.+++|
T Consensus 316 ~ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~ 393 (395)
T 4e1l_A 316 LIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKV--ETGLATLCIGGGQGISMVV 393 (395)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTC--SEEEEEEESSTTEEEEEEE
T ss_pred EEEecChhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccCCCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999988 9999999999999999999
Q ss_pred EE
Q 013344 420 ER 421 (445)
Q Consensus 420 ~~ 421 (445)
++
T Consensus 394 e~ 395 (395)
T 4e1l_A 394 SR 395 (395)
T ss_dssp EC
T ss_pred eC
Confidence 75
No 10
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=100.00 E-value=2.1e-62 Score=499.91 Aligned_cols=363 Identities=43% Similarity=0.664 Sum_probs=327.7
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|+|||++||||++ +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+++. +.++++.++..+|++.+
T Consensus 2 m~~v~Ivg~~~t~~g~-~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 79 (392)
T 2vu1_A 2 TPSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQE 79 (392)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCCEEEEEeeecCccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CcHHHHHHHHHcCCCCC
Confidence 6789999999999998 457889999999999999999999999999999999999887664 66889999999999755
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cc--------------hhh--hhh---hccccchhH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KV--------------KAF--EQA---QNCLLPMGV 181 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~--------------~~~--~~~---~~~~~~mg~ 181 (445)
.|+++++++|+|++.||..|+++|++|++|++ + ++. .. .+. ... ......|++
T Consensus 80 ~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (392)
T 2vu1_A 80 ATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGT 159 (392)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHH
T ss_pred ceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHH
Confidence 89999999999999999999999999999998 1 211 10 000 000 001135999
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
.+++|+++||+|||++|.+++++|++|.+||++|+|++||+|++++.+ +| ...++.|+++|+++|+|+|.+++|
T Consensus 160 ~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~---~~---~~~f~~d~~~r~~~t~e~~~~~~~ 233 (392)
T 2vu1_A 160 TAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGR---KG---DITVDADEYIRHGATLDSMAKLRP 233 (392)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCT---TC---CEEECSCSSCCTTCCHHHHHTCCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccC---CC---ceeeccccccCCCCCHHHHhcCCC
Confidence 999999999999999999999999999999999999999999987432 12 257899999999999999999999
Q ss_pred cccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 013344 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 341 (445)
Q Consensus 262 ~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~ 341 (445)
+|+++|++|.+|||+++|||+++||++++.|++++.++++++.+++.....|..++.++..+++++|+++|++++|||+|
T Consensus 234 v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~i 313 (392)
T 2vu1_A 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLV 313 (392)
T ss_dssp SSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEE
T ss_pred ccCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEE
Confidence 99889999999999999999999999999999999999999999999888888889999999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 342 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 342 e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
|+||+|+.+.+.+.+.||++++++|++||++++|||+|++|++++++++++|+++++ ++|++++|+|+|++.+++|++
T Consensus 314 e~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 314 EANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp EECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHHTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred EeccccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhccCC--CEEEEEEecccchheEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999887 999999999999999999886
No 11
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=100.00 E-value=3.2e-62 Score=499.21 Aligned_cols=364 Identities=41% Similarity=0.670 Sum_probs=328.2
Q ss_pred CCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC
Q 013344 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (445)
Q Consensus 49 ~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~ 128 (445)
|++|||||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+++. ++++++.++..+|++.+
T Consensus 5 ~~~v~Ivg~~~tp~g~-~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 82 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGS-FNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGC-GQNPVRQASVGAGIPYS 82 (397)
T ss_dssp CSCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCcEEEEEcccCCcee-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CCHHHHHHHHHcCCCCC
Confidence 4689999999999997 457888999999999999999999999999999999999887654 56789999999999767
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecC--ccchh--h---------hh-----h-hcc--ccchhH
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVN--PKVKA--F---------EQ-----A-QNC--LLPMGV 181 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~--~~~~~--~---------~~-----~-~~~--~~~mg~ 181 (445)
+|+++++++|+|++.||..|+++|++|++|++ .++ +.... + .+ . .+. ...|++
T Consensus 83 ~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~ 162 (397)
T 1wl4_A 83 VPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGI 162 (397)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHH
T ss_pred ccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHH
Confidence 99999999999999999999999999999998 222 11100 0 00 0 011 145999
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
.+|+|+++||+|||++|.+++++|++|.+|+.+|+|++||+||+++.++ | ++++++|+.+|+++|+|+|.++||
T Consensus 163 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~---~---~~~~~~d~~~r~~~t~e~~~~~rp 236 (397)
T 1wl4_A 163 TAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRK---G---LIEVKTDEFPRHGSNIEAMSKLKP 236 (397)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT---E---EEEECSCSCCCTTCCHHHHHTSCC
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCC---C---ceeeccccccCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999875432 2 256788999999999999999999
Q ss_pred cccCC--CccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 013344 262 VFKKD--GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 262 ~~~~~--G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID 339 (445)
+|+++ |++|.+|||+++|||+++||++++.|++++.++++++.+++.....|..++.++..+++++|+++||+++|||
T Consensus 237 vfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 316 (397)
T 1wl4_A 237 YFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVD 316 (397)
T ss_dssp SSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCC
T ss_pred ccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCC
Confidence 99885 8999999999999999999999999999999999999999998888888899999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEE
Q 013344 340 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 419 (445)
Q Consensus 340 ~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l 419 (445)
+||+||+|+.+.+.+.+.||++++++|++||++++|||+|++|++++++++++|++++. ++|++++|.|+|++.+++|
T Consensus 317 ~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~ 394 (397)
T 1wl4_A 317 IFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGR--SRGVAALCIGGGMGIAMCV 394 (397)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEETTTEEEEEEE
T ss_pred EEEEecccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhcCC--CEEEEEEecccchheEEEE
Confidence 99999999999999999999999999999999999999999999999999999999877 9999999999999999999
Q ss_pred EEc
Q 013344 420 ERG 422 (445)
Q Consensus 420 ~~~ 422 (445)
+++
T Consensus 395 e~~ 397 (397)
T 1wl4_A 395 QRE 397 (397)
T ss_dssp EEC
T ss_pred EeC
Confidence 873
No 12
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=100.00 E-value=1.2e-61 Score=493.96 Aligned_cols=367 Identities=43% Similarity=0.619 Sum_probs=328.2
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~A-gi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~ 126 (445)
+|++|||||++||||++..+|.++++++.+|+.+|+++||+++ |+++++||.+++|++.+++..+.++++.++..+|++
T Consensus 3 ~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~ 82 (390)
T 1wdk_C 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIP 82 (390)
T ss_dssp CTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSC
T ss_pred CCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCC
Confidence 4789999999999999742578889999999999999999999 999999999999998877643467899999999997
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cC--cc-chhh-----h-hhhccccchhHhHHHHHHHhC
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VN--PK-VKAF-----E-QAQNCLLPMGVTSENVAHRFG 191 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~--~~-~~~~-----~-~~~~~~~~mg~~ae~~a~~~g 191 (445)
.++|.++++++|+|++.||..|+++|++|++|++ + ++ +. ...+ . +..+...+|++++++|+++||
T Consensus 83 ~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 162 (390)
T 1wdk_C 83 HTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHG 162 (390)
T ss_dssp TTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHT
T ss_pred CCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhC
Confidence 7899999999999999999999999999999998 2 21 11 0000 0 011223459999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccC-CCccc
Q 013344 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTT 270 (445)
Q Consensus 192 isre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~-~G~~t 270 (445)
+|||++|.+++++|++|.+|+++|+|.+||+|++++.+. + +...+++|+++|+++|+|+|.+++|+|+| +|++|
T Consensus 163 ~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~---~--~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt 237 (390)
T 1wdk_C 163 ISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDEN---G--FLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVT 237 (390)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTT---C--CEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCC---C--cceeeccccccCCCCCHHHHhcCCCcccCCCCcEe
Confidence 999999999999999999999999999999999763211 1 11368899999999999999999999999 99999
Q ss_pred cCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH
Q 013344 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 350 (445)
Q Consensus 271 ~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~ 350 (445)
.+|||+++|||+++||++++.|++++.++++++.+++..+..|..++.++..+++++|+++|++++|||+||+||+|+.+
T Consensus 238 ~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~~ 317 (390)
T 1wdk_C 238 AGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQ 317 (390)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHH
T ss_pred chhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCHHH
Confidence 99999999999999999999999999999999999999888888888999999999999999999999999999999999
Q ss_pred HHHHHHHcCCC---CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEEE
Q 013344 351 FVYCRNKLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421 (445)
Q Consensus 351 ~~~~~e~LGl~---~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~~ 421 (445)
.+.+.+.||++ .+++|++||++++|||+|++|++++++++++|+++++ ++|++++|.|+|++.+++|++
T Consensus 318 ~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 318 ALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG--TFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp HHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhcCC--CEEEEEecccchheEEEEEEe
Confidence 99999999999 6799999999999999999999999999999999877 999999999999999999886
No 13
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=100.00 E-value=2.7e-59 Score=477.35 Aligned_cols=362 Identities=33% Similarity=0.554 Sum_probs=322.7
Q ss_pred CCCcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCC
Q 013344 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (445)
Q Consensus 48 ~~~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~ 127 (445)
.|++|||||++||||+++ .|.++++++.+|+.+|+++||+++|+++++||.+++|++.+++. +++++..++..+|++.
T Consensus 6 ~~~~v~Ivg~~rTp~g~~-~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~va~~lgl~~ 83 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGSF-LGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGE-GQAPTRQAVLGAGLPI 83 (395)
T ss_dssp BCCCEEEEEEEECCCEET-TSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCT
T ss_pred CCCCeEEEeccccccccc-CCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CchHHHHHHHHcCCCC
Confidence 468899999999999974 57888999999999999999999999999999999999987765 6788999999999976
Q ss_pred CCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----e-cCc--cch-h----hh----------hh---hccccchhH
Q 013344 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----S-VNP--KVK-A----FE----------QA---QNCLLPMGV 181 (445)
Q Consensus 128 ~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~-~~~--~~~-~----~~----------~~---~~~~~~mg~ 181 (445)
++|+++++++|+|++.||..|+++|++|++|++ + ++. ... . +. .. .....+|++
T Consensus 84 ~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~ 163 (395)
T 2ib8_A 84 STPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGS 163 (395)
T ss_dssp TCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHH
T ss_pred CceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHH
Confidence 799999999999999999999999999999998 1 111 100 0 00 00 011246999
Q ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCC
Q 013344 182 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261 (445)
Q Consensus 182 ~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p 261 (445)
++++|+++||+|||++|.+++++|++|.+|+.+++|++||+|+++..+ . ..+.+++.|+.+| ++++|+|.+++|
T Consensus 164 ~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~----~-~p~~~~~~D~~~r-~~~~~~l~~l~~ 237 (395)
T 2ib8_A 164 CAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK----G-QPDVVVKEDEEYK-RVDFSKVPKLKT 237 (395)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT----T-SCCEEECSCSGGG-SCCTTTGGGSCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc----C-Ccceeeccccccc-cCCHHHHhcCCc
Confidence 999999999999999999999999999999999999999999987431 0 1125788999999 588999999999
Q ss_pred cccC-CCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 013344 262 VFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340 (445)
Q Consensus 262 ~~~~-~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~~~~~~ai~~aL~~aGl~~~DID~ 340 (445)
+|.+ +|++|.+|||+++|||+++||++++.|++++.++++++.+++....+|..++.++..+++++|+++|++++|||+
T Consensus 238 ~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ 317 (395)
T 2ib8_A 238 VFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAM 317 (395)
T ss_dssp TTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEE
T ss_pred cccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCE
Confidence 9954 899999999999999999999999999999999999999999877788888888999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccceeEEEEE
Q 013344 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420 (445)
Q Consensus 341 ~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~~a~~l~ 420 (445)
||+||+|+.+.+...|.||++++++|++||++++|||+|++|++++++++++|++ + ++|++++|.|+|++.+++|+
T Consensus 318 ie~~D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~--~--~~gl~~~~~ggG~g~a~~~~ 393 (395)
T 2ib8_A 318 WEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ--G--EYGLASICNGGGGASAMLIQ 393 (395)
T ss_dssp EEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT--T--CEEEEEEEETTTEEEEEEEE
T ss_pred EEEccccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh--C--CceEEEEecccCHhheEEEE
Confidence 9999999999999999999999999999999999999999999999999999987 4 78999999999999999998
Q ss_pred E
Q 013344 421 R 421 (445)
Q Consensus 421 ~ 421 (445)
+
T Consensus 394 ~ 394 (395)
T 2ib8_A 394 K 394 (395)
T ss_dssp E
T ss_pred c
Confidence 7
No 14
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=100.00 E-value=5.3e-48 Score=405.37 Aligned_cols=347 Identities=15% Similarity=0.150 Sum_probs=275.7
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCc-----------ccchHHHH
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS-----------QRASECRM 118 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~-----------~~~~~a~~ 118 (445)
+..||||+++|++.+ .+|.+++.++.||+.+|+++||+|+||++++||.+|.|++..... +..++++.
T Consensus 18 RtPVIVGvG~t~~r~-~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 96 (520)
T 4egv_A 18 RTPVIVGVGQFTERI-DLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRS 96 (520)
T ss_dssp TCEEEEEEEEEEC---------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHH
T ss_pred CCeEEEEeeeccccC-CCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHH
Confidence 567899999999975 457888999999999999999999999999999888776532221 13457788
Q ss_pred HHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeE------ecCc--cchh------hh-----hhhccccch
Q 013344 119 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------SVNP--KVKA------FE-----QAQNCLLPM 179 (445)
Q Consensus 119 ~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v------~~~~--~~~~------~~-----~~~~~~~~m 179 (445)
++..+|++ ..+.+.++.+|+|++++|..|++.|++|++|++ .++. .+.. +. ...+..+.|
T Consensus 97 va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (520)
T 4egv_A 97 VARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGY 175 (520)
T ss_dssp HHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-----------------------------
T ss_pred HHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCcccccccccccccccc
Confidence 88899997 478889999999999999999999999999999 2221 1110 10 112234567
Q ss_pred hHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcC
Q 013344 180 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 259 (445)
Q Consensus 180 g~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~ 259 (445)
+..+++++.+||+++++++.+...++.++..+...+.|++||+||.++... ....++++.+|+++|+|++.++
T Consensus 176 ~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~-------~a~~np~a~~r~~~t~E~l~~l 248 (520)
T 4egv_A 176 DGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSK-------VAAKNPYSSAPTERSVEELLTV 248 (520)
T ss_dssp -----CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-------HHHHCTTSSSCCCCCHHHHHSC
T ss_pred chhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEeccc-------ccccCccccccCCCCHHHhccc
Confidence 788899999999999999999999999999999999999999999765321 1234567788999999999999
Q ss_pred CCcccC--CCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCC--------CccHHHHHHHHHH
Q 013344 260 KPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM--------GVGPAVAIPAAVK 329 (445)
Q Consensus 260 ~p~~~~--~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~--------~~~~~~ai~~aL~ 329 (445)
+|.|.+ ++.+|.+|||+++|||+|+||++++.|+++|+++++++..++.....|..+ +.++..+++++|+
T Consensus 249 ~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~ 328 (520)
T 4egv_A 249 TASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALR 328 (520)
T ss_dssp CSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHH
T ss_pred CcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHH
Confidence 998864 677789999999999999999999999999999998888887776655443 3456789999999
Q ss_pred HcCCCCCCccEEEecCCChHHHHHHHHHcCCCC---CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEE
Q 013344 330 SAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 406 (445)
Q Consensus 330 ~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~---~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~ 406 (445)
++||+++|||+||+||+|+.+.+.+++.|||++ .++|++||++++|||+|++|+..++++++||+++.+ ++|+..
T Consensus 329 ~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~--~~~L~~ 406 (520)
T 4egv_A 329 VAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPG--QFALVG 406 (520)
T ss_dssp HHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTT--CEEEEE
T ss_pred HhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCC--CceEEe
Confidence 999999999999999999999999999999964 589999999999999999999999999999999888 888876
Q ss_pred E
Q 013344 407 M 407 (445)
Q Consensus 407 ~ 407 (445)
-
T Consensus 407 ~ 407 (520)
T 4egv_A 407 A 407 (520)
T ss_dssp E
T ss_pred C
Confidence 4
No 15
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.96 E-value=6.1e-29 Score=247.56 Aligned_cols=262 Identities=24% Similarity=0.205 Sum_probs=196.1
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.||. .||++.+|+ ...++++..+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++.+++
T Consensus 44 ~~~i~--~rtgi~~r~-~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lgl~~~~~ 119 (333)
T 4dfe_A 44 DEWIV--ARTGIHARY-FAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFV-FPSTACLLQNKLGIRNHGA 119 (333)
T ss_dssp HHHHH--HHHCCSEEE-ECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHTTCCSCCE
T ss_pred HHHhH--HhcCceEEE-EcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHhCCCCCCc
Confidence 45555 689998765 3667899999999999999999999999999999999988775 4567888999999976899
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++++++|+|++.||..|+++|++|.++++.+
T Consensus 120 ~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLv------------------------------------------------ 151 (333)
T 4dfe_A 120 AFDVQAVCSGFAYAVATADSFIRSGQHRTALV------------------------------------------------ 151 (333)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEE------------------------------------------------
T ss_pred EEEeCcccHHHHHHHHHHHHHHHcCCCCEEEE------------------------------------------------
Confidence 99999999999999999999999999887711
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
+..|.. + ..++.+ ....+..++|||+|+||.+.+
T Consensus 152 ------------------------------vg~e~~------------s-~~~~~~---d~~~~~lfGDGA~A~vl~~~~ 185 (333)
T 4dfe_A 152 ------------------------------IGAETF------------S-RILDFK---DRTTCVLFGDGAGAVILQASD 185 (333)
T ss_dssp ------------------------------EEEEEG------------G-GGCCTT---CTTTTTTBCEEEEEEEEEEES
T ss_pred ------------------------------EEeecc------------c-cccCcc---cccceeeeccccEEEEEEEcC
Confidence 000000 0 000000 011234489999999998754
Q ss_pred HHHhcCCCeeEEEEEe-EEe---ecCC-----------CC--C-C--------ccHHHHHHHHHHHcCCCCCCccEEEec
Q 013344 291 VAMRKGLPILGVFRTF-AAV---GVDP-----------AI--M-G--------VGPAVAIPAAVKSAGLQLDDIDLFEIN 344 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~-~~~---~~~p-----------~~--~-~--------~~~~~ai~~aL~~aGl~~~DID~~e~h 344 (445)
. ..++...... +.. -..| .. | + .....+++++|+++|++++|||+|++|
T Consensus 186 ~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~H 260 (333)
T 4dfe_A 186 E-----PGVLASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSAEQIDWLIPH 260 (333)
T ss_dssp S-----CSEEEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEEC
T ss_pred C-----CCeEEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 1 1222211110 000 0000 00 0 0 112478999999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 345 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 345 ~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
+++..+...+.+.||++++++..+. +.+|||++++++.+|.++.+++.. +.|+.+++ +|+|++|+.+++++
T Consensus 261 q~~~~i~~~~~~~lgl~~~~~~~~l------~~~GNt~sasi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 261 QANIRIMQSTCRKLGLPQERMIVTV------GEHGNTSAASIPLALDVAVRDGRI-KRGQNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp CSCHHHHHHHHHHTTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHTTCS-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCHHHHHHHHHHhCCCHHHhhhhH------HhcCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEchhheeEEEEEEC
Confidence 9999999999999999999998765 789999999999999999887655 66754443 89999999888875
No 16
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.96 E-value=4.8e-28 Score=240.03 Aligned_cols=261 Identities=19% Similarity=0.185 Sum_probs=194.7
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.||. .+|++.+|+. +.+++++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++ +++
T Consensus 37 ~~~i~--~~tGi~~R~~-a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~ 111 (323)
T 3il3_A 37 DEWIV--TRSGIRERRI-AAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHA-YPSAACQVQGLLNID-DAI 111 (323)
T ss_dssp HHHHH--HHTCCCEEEC-CCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHTTCS-SCE
T ss_pred HHHHH--HhcCCcEEEE-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CccHHHHHHHHhCCC-Ccc
Confidence 44565 6899987653 556899999999999999999999999999999999988765 456788888999996 699
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++++++|+|+++||..|.++|++|.++++.+
T Consensus 112 ~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLv------------------------------------------------ 143 (323)
T 3il3_A 112 SFDLAAACTGFVYALSVADQFIRAGKVKKALV------------------------------------------------ 143 (323)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTSCSEEEE------------------------------------------------
T ss_pred EEEECCccHHHHHHHHHHHHHHHCCCCCEEEE------------------------------------------------
Confidence 99999999999999999999999999887611
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
+..|... ..+++.. ...+..++|||+|+||...+
T Consensus 144 ------------------------------vg~e~~s-------------~~~~~~d---~~~~~lfGDGA~A~vl~~~~ 177 (323)
T 3il3_A 144 ------------------------------IGSDLNS-------------RKLDETD---RSTVVLFGDGAGAVILEASE 177 (323)
T ss_dssp ------------------------------EEEEEGG-------------GSCCTTC---TTTTTTBCEEEEEEEEEEES
T ss_pred ------------------------------EEeeccc-------------cccCccc---cccccccccceEEEEEEEcC
Confidence 0000000 0000000 01233479999999998754
Q ss_pred HHHhcCCCeeEEEEEe-EEe----ecC----C----CCCC-cc----------HHHHHHHHHHHcCCCCCCccEEEecCC
Q 013344 291 VAMRKGLPILGVFRTF-AAV----GVD----P----AIMG-VG----------PAVAIPAAVKSAGLQLDDIDLFEINEA 346 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~-~~~----~~~----p----~~~~-~~----------~~~ai~~aL~~aGl~~~DID~~e~h~~ 346 (445)
...++...... +.. ..+ | ..+. .+ ...+++++|+++|++++|||+|.+|++
T Consensus 178 -----~~~i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~ 252 (323)
T 3il3_A 178 -----QEGIISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQA 252 (323)
T ss_dssp -----SCCEEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCS
T ss_pred -----CCCeEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC
Confidence 11222211111 000 011 0 0000 01 136788999999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 347 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 347 ~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
+..+...+.+.||++++++..+. +.+|||++++++.+|.++.+++.. +.|+.+++ +|+|++|+.+++++
T Consensus 253 ~~~i~~~~~~~lgl~~ek~~~~l------~~~GNt~sasi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 253 NLRIITATAKKLEMDMSQVVVTL------DKYANNSAATVPVALDEAIRDGRI-QRGQLLLLEAFGGGWTWGSALVRF 323 (323)
T ss_dssp CHHHHHHHHHHTTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHTTSS-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHHHHHHHHcCcCHHHhhccH------hhcCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEehhheeEEEEEEC
Confidence 99999999999999999998765 789999999999999999887665 66764443 89999999888875
No 17
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.96 E-value=3.9e-27 Score=241.45 Aligned_cols=248 Identities=18% Similarity=0.232 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-----------c--------------cchHHHHHHHHcCCC
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFP 126 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-----------~--------------~~~~a~~~~~~lGl~ 126 (445)
.+|+.+|+++||+++|+++++|| .|++|+..++.. . ...++..++..+|+
T Consensus 78 ~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl- 156 (416)
T 1e5m_A 78 CHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA- 156 (416)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC-
Confidence 38999999999999999999999 799998765410 0 01357778889999
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
+.|+++|+++|+|++.||..|+++|++|++|++.... .. -+++..+..+..
T Consensus 157 -~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~------------------------~~~~~~~~~~~~--- 208 (416)
T 1e5m_A 157 -KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEA------------------------AITPLSYAGFAS--- 208 (416)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC------------------------CCSHHHHHHHHH---
T ss_pred -CCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecc------------------------cCCHHHHHHHHH---
Confidence 4799999999999999999999999999999981100 00 000000001100
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvv 285 (445)
.+.+.. ... +++. ..+| |+. ..++..++||++++|
T Consensus 209 --------~~~ls~-------~~~------------~p~~------------~~rp-fd~-----~~~G~v~geGaaavv 243 (416)
T 1e5m_A 209 --------ARALSF-------RND------------DPLH------------ASRP-FDK-----DRDGFVMGEGSGILI 243 (416)
T ss_dssp --------TTCBCC-------CTT------------CGGG------------TCCT-TBT-----TCCSBCBBCEEEEEE
T ss_pred --------cCCccC-------CCC------------CCcc------------cccc-Ccc-----CCCCceeeeeEEEEE
Confidence 011000 000 0111 1334 432 234556899999999
Q ss_pred eeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HHHH
Q 013344 286 LMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VYCR 355 (445)
Q Consensus 286 L~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~~~ 355 (445)
|++.+.|++.+.++++++.+++..... |...+.++..+++++|+++|++++||||+++|++++... ..+.
T Consensus 244 L~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~ 323 (416)
T 1e5m_A 244 LEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIK 323 (416)
T ss_dssp EEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHH
T ss_pred ECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHH
Confidence 999999999999999999998876533 444566778999999999999999999999999998742 2344
Q ss_pred HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 356 e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+.+|....+++.++.+..+||+.|++|+.++++++.+|+++.
T Consensus 324 ~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ 365 (416)
T 1e5m_A 324 QALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDK 365 (416)
T ss_dssp HHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCC
Confidence 556665567777777777999999999999999999999753
No 18
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=99.95 E-value=5.5e-28 Score=242.18 Aligned_cols=258 Identities=19% Similarity=0.235 Sum_probs=190.5
Q ss_pred CcEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCC
Q 013344 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (445)
Q Consensus 50 ~~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~ 129 (445)
.+.||. .||++.+|+. +.++++..+|+++|+++||+++|++|+|||.||++++++++. .+..+..++..||++ ..
T Consensus 40 ~~e~I~--~rtGI~~R~~-a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~v~~~LGl~-~~ 114 (350)
T 4ewp_A 40 SDEWIR--QRTGIVTRQR-ATAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHA-TPSAAALVAHEIGAT-PA 114 (350)
T ss_dssp CHHHHH--HHHCCSEEEC-CCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCS-SSCHHHHHHHHTTCT-TS
T ss_pred CHHHHH--hccCceEEEE-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CCchHHHHHHHhCCC-Cc
Confidence 356676 6899987664 557899999999999999999999999999999999999875 456677788899996 57
Q ss_pred ceEEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 130 ~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
++|+++.+|+++++||..|..+|++|.++.+ +..+.+.++.+
T Consensus 115 ~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~~d~~~--------------------------------- 161 (350)
T 4ewp_A 115 PAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSDVVDPTD--------------------------------- 161 (350)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCCTTC---------------------------------
T ss_pred eEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeeceecccccc---------------------------------
Confidence 8999999999999999999999999988776 11111110000
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
...+..++|||+|+
T Consensus 162 ------------------------------------------------------------------~~~~~lfgDGA~A~ 175 (350)
T 4ewp_A 162 ------------------------------------------------------------------RSISFLLGDGAGAV 175 (350)
T ss_dssp ------------------------------------------------------------------TTTGGGBCEEEEEE
T ss_pred ------------------------------------------------------------------cccccccccchhee
Confidence 00112267888888
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeE-----Eeec------------------CC------------CC-C-C--------cc
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFA-----AVGV------------------DP------------AI-M-G--------VG 319 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~-----~~~~------------------~p------------~~-~-~--------~~ 319 (445)
||...+. .+. .....+.. .... +. .. | + ..
T Consensus 176 vl~~~~~---~~~--~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~ 250 (350)
T 4ewp_A 176 IVAASDE---PGI--SPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWS 250 (350)
T ss_dssp EEEEESS---CCB--CCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHT
T ss_pred eeecccC---CCc--cceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHh
Confidence 8865431 111 10011000 0000 00 00 0 0 01
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCC-CCChhcccChhhhHHHHHHHHHHHHHHhcCC
Q 013344 320 PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINV-NGGALAIGHPLGTTGARCVATLLHEMKRRGR 398 (445)
Q Consensus 320 ~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~-~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~ 398 (445)
...+++++|+++|++++|||+|.+||++..+...+.+.||++++++.+ +. +.+|||++++++.+|+++.+++.
T Consensus 251 ~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~~l------~~~GNtssasi~~~L~~~~~~g~ 324 (350)
T 4ewp_A 251 MAKVAREALDAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVARDI------ADAGNTSAASIPLAMHRLLEENP 324 (350)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECCTH------HHHCBCGGGHHHHHHHHHHHHCG
T ss_pred hhHHHHHHHHhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEeccc------ccccchHHHHHHHHHHHHHHhCC
Confidence 236889999999999999999999999999999999999999998754 44 78999999999999999988765
Q ss_pred CCceeeEEE-e-ecccceeEEEEEEcc
Q 013344 399 DCRFGVISM-C-IGTGMGAAAVFERGD 423 (445)
Q Consensus 399 ~~~~G~~~~-~-~G~G~~~a~~l~~~~ 423 (445)
. +.|..++ + +|+|++|+++++|+.
T Consensus 325 ~-~~Gd~vll~~fG~G~t~~~~vlr~P 350 (350)
T 4ewp_A 325 E-LSGGLALQIGFGAGLVYGAQVVRLP 350 (350)
T ss_dssp G-GTTSEEEEEEEETTTEEEEEEEECC
T ss_pred C-CCcCEEEEEEEchhhEeEEEEEEeC
Confidence 5 6665433 3 899999999998863
No 19
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.95 E-value=1.2e-27 Score=241.16 Aligned_cols=264 Identities=17% Similarity=0.152 Sum_probs=193.9
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.+|. .+|++.+|+. ..+++++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++.+++
T Consensus 59 ~~~i~--~~tGI~~R~~-a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~ 134 (365)
T 3gwa_A 59 AEKIL--AKTGIRERRI-AAPRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYV-LPTSACMLQHRLGIPTHAG 134 (365)
T ss_dssp HHHHH--HHHCCCEEEE-CCTTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCS-BSCHHHHHHHHTTCCTTSE
T ss_pred HHHHH--HhcCccEEEE-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCCCCce
Confidence 34444 5788886654 456789999999999999999999999999999999988775 5567788888999986799
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++++.+|+|+++||..|+++|++|.++++.+
T Consensus 135 ~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLv------------------------------------------------ 166 (365)
T 3gwa_A 135 ALDVNLGCSGYVYGLSLAKGLVETGAARCVLL------------------------------------------------ 166 (365)
T ss_dssp EEEEECSTTHHHHHHHHHHHHHHTTSCSEEEE------------------------------------------------
T ss_pred EEEecccChHHHHHHHHHHHHHHcCCCCEEEE------------------------------------------------
Confidence 99999999999999999999999999887711
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
+..|... + .++++. ...+..++|||+|+||.+.+
T Consensus 167 ------------------------------vg~e~~s------------~-~~~~~d---r~~~~lfGDGAaA~vl~~~~ 200 (365)
T 3gwa_A 167 ------------------------------LTADTYS------------K-YLHPLD---KSVRTLFGDGASATAVIAEH 200 (365)
T ss_dssp ------------------------------EEEECGG------------G-GSCTTC---HHHHTTBCCEEEEEEEEEEC
T ss_pred ------------------------------EEEchhh------------c-cCCccc---ccccccccceeEEEEEEecC
Confidence 0000000 0 000000 00122378999999998654
Q ss_pred HHHhcCCCeeEEEEEeE-E----eec------CCC-------------------CC---C--------ccHHHHHHHHHH
Q 013344 291 VAMRKGLPILGVFRTFA-A----VGV------DPA-------------------IM---G--------VGPAVAIPAAVK 329 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~~-~----~~~------~p~-------------------~~---~--------~~~~~ai~~aL~ 329 (445)
... ..++....... . ... .|. .+ + .....+++++|+
T Consensus 201 ~~~---~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~ 277 (365)
T 3gwa_A 201 GEL---ERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLA 277 (365)
T ss_dssp SSS---CSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC---CceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHH
Confidence 210 01111111110 0 000 010 00 0 001367899999
Q ss_pred HcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe-
Q 013344 330 SAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC- 408 (445)
Q Consensus 330 ~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~- 408 (445)
++|++++|||+|.+|+++..+...+.++||++++++..+. +.+|||++++++.+|.++.+++.. +.|+.+++
T Consensus 278 ~~gl~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~l------~~~GNtssAsipl~L~~~~~~g~~-~~Gd~vll~ 350 (365)
T 3gwa_A 278 LAGEPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVLM------EHCGNTVSSTLPLALETMRANGTL-ARGMRLMLL 350 (365)
T ss_dssp HHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCCC------TTTCBCGGGHHHHHHHHHHHTTCC-CTTCEEEEE
T ss_pred HcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHHH------hcccchHHHHHHHHHHHHHHcCCC-CCCCEEEEE
Confidence 9999999999999999999999999999999999998776 889999999999999999887765 66764443
Q ss_pred -ecccceeEEEEEEc
Q 013344 409 -IGTGMGAAAVFERG 422 (445)
Q Consensus 409 -~G~G~~~a~~l~~~ 422 (445)
+|+|++|+.+++++
T Consensus 351 ~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 351 GFGVGYSWAGCLVNF 365 (365)
T ss_dssp EEETTTEEEEEEEEC
T ss_pred EEehhheeEEEEEEC
Confidence 89999999888875
No 20
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.95 E-value=2e-26 Score=236.90 Aligned_cols=250 Identities=19% Similarity=0.257 Sum_probs=185.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCC-CC----cEEEEeccCC--------------------------CcccchHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSE-VG----DIVVGTVLAP--------------------------GSQRASECRMAAFY 122 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~d-Id----~vi~g~~~~~--------------------------~~~~~~~a~~~~~~ 122 (445)
+..+|+.+|+++||++||+++++ || .+++|+.... .. ....+..++..
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~is~~ 164 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRL-INLASGHVSIK 164 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTC-TTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccch-hhhHHHHHHHH
Confidence 35789999999999999999998 88 5888875321 11 22456677889
Q ss_pred cCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 123 lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
+|+ +.|+++|+++|+|++.||..|+++|++|++|++..... + .-+++..+..+..
T Consensus 165 lgl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~--------e---------------~~~~~~~~~~~~~ 219 (428)
T 3kzu_A 165 HKL--RGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGT--------E---------------SPVSRISLAGFAA 219 (428)
T ss_dssp HTC--CSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE--------E---------------CCCSHHHHHHHHH
T ss_pred cCC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeee--------c---------------CcCCHHHHHHHHH
Confidence 999 46999999999999999999999999999999811000 0 0011111122211
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
.+. ++.+. .+-+ -...+| |+. ..++..++|||+
T Consensus 220 -----------~~~------------------------ls~~~-----~~~~-~~~~~p-fd~-----~~~G~v~gdGAa 252 (428)
T 3kzu_A 220 -----------CKA------------------------LSTER-----NDDP-TAASRP-YDE-----DRDGFVMGEGAG 252 (428)
T ss_dssp -----------TTC------------------------BCCSC-----TTSG-GGTCCT-TBT-----TCCSBCBBCEEE
T ss_pred -----------ccc------------------------cccCc-----cCCc-ccccCC-ccc-----CCCceeecCceE
Confidence 000 11110 0000 011334 322 234556899999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCh----HHHHH
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA----SQFVY 353 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~----~~~~~ 353 (445)
++||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+|+|++++ .....
T Consensus 253 avvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~d~~e~~a 332 (428)
T 3kzu_A 253 IVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTSTMADTIELGA 332 (428)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSSTTHHHHHHH
T ss_pred EEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcchhhHHHHHH
Confidence 9999999999999999999999888765 34566677888999999999999999999999996665 33445
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.+.+|.+.+++|+++++..+||++|++|+.++++++.+|+++
T Consensus 333 l~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~ 375 (428)
T 3kzu_A 333 VERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDN 375 (428)
T ss_dssp HHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccC
Confidence 5666788888999999999999999999999999999999875
No 21
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.95 E-value=1.1e-27 Score=240.34 Aligned_cols=263 Identities=14% Similarity=0.064 Sum_probs=193.6
Q ss_pred EEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceE
Q 013344 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 53 ~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~ 132 (445)
+|. .+|++.+|+. ..+++++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++.+++++
T Consensus 47 ~i~--~~tGI~~R~~-a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~ 122 (354)
T 4efi_A 47 DVV--KMIGVNRRRW-ADAQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYR-LPATAFVLQAELDLPASCLAL 122 (354)
T ss_dssp HHH--HHHCCSEEEC-CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCCTTSEEE
T ss_pred HHH--HhcCCeEEEE-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCcCCCccEE
Confidence 454 5788887654 456889999999999999999999999999999999988765 567788899999997679999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~ 212 (445)
+++.+|+|++.||..|.++|++|.++++.+
T Consensus 123 ~v~~aC~s~~~al~~A~~~i~~g~~~~vLv-------------------------------------------------- 152 (354)
T 4efi_A 123 DINLGCSGYPQALWLGMNLIQTGAAKRVLL-------------------------------------------------- 152 (354)
T ss_dssp EECCCTTHHHHHHHHHHHHHHTTSCSEEEE--------------------------------------------------
T ss_pred eeCcccHHHHHHHHHHHHHHHCCCCCEEEE--------------------------------------------------
Confidence 999999999999999999999999887711
Q ss_pred HcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHH
Q 013344 213 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 292 (445)
Q Consensus 213 ~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a 292 (445)
+..|.. ...++++. ...+..++|||+|+||.+.+..
T Consensus 153 ----------------------------vg~e~~-------------s~~~~~~d---~~~~~lfGDGA~A~vl~~~~~~ 188 (354)
T 4efi_A 153 ----------------------------AVGDTI-------------SKMIDPTD---RSTSLLFGDAGTMTALETSNGD 188 (354)
T ss_dssp ----------------------------EEEECG-------------GGGCCTTC---HHHHTTBCCEEEEEEEEECCSC
T ss_pred ----------------------------EEechh-------------cccCCccc---cccccccccceeEEEEeecCCC
Confidence 000000 00000000 0012337899999999865321
Q ss_pred HhcCCCeeEEEE-EeEE----eecC-----CC--------------CC---Cc--------cHHHHHHHHHHHcCCCCCC
Q 013344 293 MRKGLPILGVFR-TFAA----VGVD-----PA--------------IM---GV--------GPAVAIPAAVKSAGLQLDD 337 (445)
Q Consensus 293 ~~~g~~~~~~i~-~~~~----~~~~-----p~--------------~~---~~--------~~~~ai~~aL~~aGl~~~D 337 (445)
..+.... ..+. ...+ |. .+ +. ....+++++|+++|++++|
T Consensus 189 -----~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~d 263 (354)
T 4efi_A 189 -----AAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDKDS 263 (354)
T ss_dssp -----CEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred -----CceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 1111111 1100 0000 10 00 00 1136788999999999999
Q ss_pred ccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--eccccee
Q 013344 338 IDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGA 415 (445)
Q Consensus 338 ID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~ 415 (445)
||+|.+||++..+...+.+.||++++++..+. +.+||||+++++.+|.++.+++.. +.|+.+++ +|+|++|
T Consensus 264 id~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~l------~~~GNt~sasi~~~L~~~~~~g~~-~~Gd~vll~~fG~G~t~ 336 (354)
T 4efi_A 264 YDAFLFHQANLFMLKHLAKKAGLPAERVPVNI------GEYGNTSCASIPLLITTELKDRLK-EETLQLGMFGFGVGYSW 336 (354)
T ss_dssp CSEEEECCCCHHHHHHHHHHTTCCGGGSCCCH------HHHCBCGGGHHHHHHHHHSHHHHH-HSCEEEEEEEEETTTEE
T ss_pred CCEEEeCCCCHHHHHHHHHHhCcCHHHHHHHH------hhhCcHHHHHHHHHHHHHHHhCCC-CCCCEEEEEEEchhhhh
Confidence 99999999999999999999999999998765 889999999999999998766543 55654333 8999999
Q ss_pred EEEEEEcccc
Q 013344 416 AAVFERGDCA 425 (445)
Q Consensus 416 a~~l~~~~~~ 425 (445)
+.+++++...
T Consensus 337 ~~~ll~~~~~ 346 (354)
T 4efi_A 337 ASAALAVGPL 346 (354)
T ss_dssp EEEEEEECCC
T ss_pred eeeEEEECCc
Confidence 9999988654
No 22
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.95 E-value=5.9e-27 Score=234.33 Aligned_cols=271 Identities=15% Similarity=0.165 Sum_probs=195.9
Q ss_pred EEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCce
Q 013344 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (445)
Q Consensus 52 v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~ 131 (445)
-+|. .+|++.+|+. ..+++++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++.++++
T Consensus 48 ~~i~--~~tGi~~R~~-~~~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~ 123 (345)
T 3s21_A 48 DVLG--DVAGIHARRL-WDQDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYL-EPSTASIVSGNLGVSDHCMT 123 (345)
T ss_dssp CHHH--HTTCCSEEEE-CSSCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCS-SSCHHHHHHHHHTCCTTCEE
T ss_pred HHHH--HhhCceeEEE-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CChHHHHHHHHhCCCCCceE
Confidence 4554 5888887654 446789999999999999999999999999999999988775 45678888889999767999
Q ss_pred EEecCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHH
Q 013344 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHR 206 (445)
Q Consensus 132 ~~v~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~ 206 (445)
++++++|+|++.||..|+++|++|.++++ +..+...++.. +.
T Consensus 124 ~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~~--------------------------~~------- 170 (345)
T 3s21_A 124 FDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKTL--------------------------ER------- 170 (345)
T ss_dssp EECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHHHHH--------------------------HH-------
T ss_pred EeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhcccc--------------------------cc-------
Confidence 99999999999999999999999999988 22111111000 00
Q ss_pred HHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEe
Q 013344 207 KAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLL 286 (445)
Q Consensus 207 ~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL 286 (445)
+ ..|+ .+.+. |+. ..+...++|||+|+||
T Consensus 171 ---------~-------------------------~~~~-----~~~~~-------f~~-----~~~~~~~GdGA~A~vl 199 (345)
T 3s21_A 171 ---------M-------------------------TSPD-----VTEEE-------FRN-----ELAALTLGCGAAAMVM 199 (345)
T ss_dssp ---------H-------------------------TCTT-----CCHHH-------HHH-----HHGGGGBCCEEEEEEE
T ss_pred ---------c-------------------------cCCc-----cchhh-------hhh-----hccceeeccceeEEEE
Confidence 0 0000 00000 000 0112237999999999
Q ss_pred eCHHHHHhcCCCeeEEEEEeEEeecC-------C--C--CC-Cc--------cHHHHHHHHHHHcCCCCCCccEEEecCC
Q 013344 287 MKRSVAMRKGLPILGVFRTFAAVGVD-------P--A--IM-GV--------GPAVAIPAAVKSAGLQLDDIDLFEINEA 346 (445)
Q Consensus 287 ~s~~~a~~~g~~~~~~i~~~~~~~~~-------p--~--~~-~~--------~~~~ai~~aL~~aGl~~~DID~~e~h~~ 346 (445)
.+.+... .+. ++.+......+ + . .| +. ....+++++|+++|++++|||+|.+|++
T Consensus 200 ~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~ 274 (345)
T 3s21_A 200 ARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQV 274 (345)
T ss_dssp EEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCS
T ss_pred ecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC
Confidence 8765311 011 23322221100 0 0 01 11 1136788999999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 347 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 347 ~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
+..+...+.++||++++++..+. +.+|||++++++.+|.++.+++.. +.|..+++ +|+|+++++++++|
T Consensus 275 ~~~i~~~~~~~lgl~~ek~~~~l------~~~GNt~sasi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 275 SRPHTAAFVKSFGIDPAKVMTIF------GEHGNIGPASVPIVLSKLKELGRL-KKGDRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp CHHHHHHHHHHHTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHHTCC-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHHHHHHHHcCcCHHHceeeH------hhcCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEChhhhheEEEEEC
Confidence 99999999999999999987665 789999999999999999887655 66664443 89999999988875
No 23
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.95 E-value=1.5e-26 Score=237.85 Aligned_cols=248 Identities=17% Similarity=0.218 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~lGl 125 (445)
...|+.+|+++||+++|+++++|| .+++|+...... .....+..++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 467999999999999999999999 588887643210 011345667789999
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+.|+++|+++|+|++.||..|+++|++|++|++.... ... . +...+..+..
T Consensus 168 --~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~---------~---------------~p~~~~~~~~-- 219 (427)
T 3ho9_A 168 --RGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKA---------S---------------TPLGVGGFGA-- 219 (427)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC---------C---------------SHHHHHHHHH--
T ss_pred --CCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc---------C---------------CHHHHHHHHh--
Confidence 4799999999999999999999999999999981100 000 0 0000011100
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
.+. +..+. .+.+. ..+| |+. ..+...++|||+++
T Consensus 220 ---------~~~------------------------ls~~~-----~~~~~--~~~p-fd~-----~~~G~v~geGAaav 253 (427)
T 3ho9_A 220 ---------ARA------------------------LSTRN-----DNPQA--ASRP-WDK-----ERDGFVLGDGAGML 253 (427)
T ss_dssp ---------TTC------------------------BCCCT-----TCHHH--HCCT-TBT-----TCCSBCBBCEEEEE
T ss_pred ---------ccC------------------------cccCC-----CCCCc--ccCC-ccC-----CCCCceeeeeEEEE
Confidence 000 00000 00011 1344 322 22444589999999
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChH-----HHHHH
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS-----QFVYC 354 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~-----~~~~~ 354 (445)
||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+|+|.+++. ....+
T Consensus 254 vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~ 333 (427)
T 3ho9_A 254 VLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAV 333 (427)
T ss_dssp EEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHH
T ss_pred EEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHH
Confidence 99999999999999999999988765 345556777889999999999999999999999966554 45667
Q ss_pred HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.+|...+++|+++++..+||+.|++|++++++++.+|+++
T Consensus 334 ~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~ 375 (427)
T 3ho9_A 334 KTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQ 375 (427)
T ss_dssp HHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcC
Confidence 778898888999999999999999999999999999999875
No 24
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.94 E-value=8.9e-27 Score=234.10 Aligned_cols=259 Identities=20% Similarity=0.177 Sum_probs=192.8
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.+|. .+|++.+|+. ..+++++.+|+.+|+++||+++|++|++||.|++++++++.. .+..+..++..+|++ +++
T Consensus 53 ~~~i~--~~tGi~~R~~-a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~ 127 (359)
T 3h78_A 53 DEFIV--ERTGVRTRYH-VEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHH-DPSQACLIQPLLGLR-HIP 127 (359)
T ss_dssp HHHHH--HHHCCCEEEE-CCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHHTCC-SCC
T ss_pred HHHHH--HhcCceEEEE-cCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCC-CCc
Confidence 34554 5788887653 556789999999999999999999999999999999988765 456788899999997 699
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEe-----cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGS-----VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~-----~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
+++++.+|+|++.||..|+++|++|.++++. ..+...++.
T Consensus 128 ~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~~~~----------------------------------- 172 (359)
T 3h78_A 128 VLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDCS----------------------------------- 172 (359)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGCCCS-----------------------------------
T ss_pred EEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccCCcc-----------------------------------
Confidence 9999999999999999999999999988771 111110000
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvv 285 (445)
|+ ....+..++|||+|+|
T Consensus 173 --------------------------------------d~------------------------~~~t~~lfGDGAaA~v 190 (359)
T 3h78_A 173 --------------------------------------DR------------------------GRNLSILLGDGAGAVV 190 (359)
T ss_dssp --------------------------------------TT------------------------THHHHTTBCEEEEEEE
T ss_pred --------------------------------------cc------------------------cccccceecceeEEEE
Confidence 00 0001233799999999
Q ss_pred eeCHHHHHhcCCCeeEEEEEeE-E----eecC-------C--------C---CCC-cc----------HHHHHHHHHHHc
Q 013344 286 LMKRSVAMRKGLPILGVFRTFA-A----VGVD-------P--------A---IMG-VG----------PAVAIPAAVKSA 331 (445)
Q Consensus 286 L~s~~~a~~~g~~~~~~i~~~~-~----~~~~-------p--------~---~~~-~~----------~~~ai~~aL~~a 331 (445)
|...+. .+..++....... . ...+ | . .+. .+ ...+++++|+++
T Consensus 191 l~~~~~---~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~ 267 (359)
T 3h78_A 191 VSAGES---LEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAH 267 (359)
T ss_dssp EECCSC---SSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCC---CCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHc
Confidence 987531 0111221111110 0 0011 0 0 000 01 136889999999
Q ss_pred CCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--e
Q 013344 332 GLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--I 409 (445)
Q Consensus 332 Gl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~ 409 (445)
|++++|||+|.+|+++..+...+.++||++++++..+. ..+|||++++++.+|+++.++ . +.|..+++ +
T Consensus 268 gl~~~did~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~l------~~~GNt~sAsi~l~L~~~~~~-l--~~Gd~vll~~f 338 (359)
T 3h78_A 268 ELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVTV------DRLGNMASASTPVTLAMFWPD-I--QPGQRVLVLTY 338 (359)
T ss_dssp TCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHGGG-S--CTTCEEEEEEE
T ss_pred CCCHHHCCEEEECCCCHHHHHHHHHHhCcCHHHhhhhh------hcccchHHHHHHHHHHHHHHh-C--CCCCEEEEEEE
Confidence 99999999999999999999999999999999998765 789999999999999999877 3 66654433 8
Q ss_pred cccceeEEEEEEcc
Q 013344 410 GTGMGAAAVFERGD 423 (445)
Q Consensus 410 G~G~~~a~~l~~~~ 423 (445)
|+|++|+.+++++.
T Consensus 339 G~G~t~~~~ll~~~ 352 (359)
T 3h78_A 339 GSGATWGAALYRKP 352 (359)
T ss_dssp ETTTEEEEEEEECC
T ss_pred chhhhheeeeEEeh
Confidence 99999999999873
No 25
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.94 E-value=1.1e-25 Score=230.48 Aligned_cols=249 Identities=17% Similarity=0.218 Sum_probs=181.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCC-----------------c--------ccchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPG-----------------S--------QRASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~-----------------~--------~~~~~a~~~~~~lG 124 (445)
...+|+.+|+++||+++|+++++|| .|++|+..+.. . ....++..++..+|
T Consensus 73 ~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 152 (413)
T 3o04_A 73 RFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFG 152 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhC
Confidence 3567999999999999999999999 89999864211 0 00123667888999
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+ +.|+++|+++|+|+++||..|+++|++|++|++..... + .-++......+..
T Consensus 153 l--~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~--------e---------------~~~~~~~~~~~~~-- 205 (413)
T 3o04_A 153 A--KGINSTTVTACATATNSIGDAFKVIERGDADAMITGGA--------E---------------APITKMSLAGFTA-- 205 (413)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE--------E---------------CCCSHHHHHHHHH--
T ss_pred C--CCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEE--------c---------------ccCCHHHHHHHHh--
Confidence 9 46999999999999999999999999999999811000 0 0000000011100
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
.+.+.. ...++.. .+| |+. ..++..++|||+++
T Consensus 206 ---------~~~ls~--------------------~~~p~~~------------~~p-fd~-----~~~g~~~gdGAaav 238 (413)
T 3o04_A 206 ---------NKALSL--------------------NPDPETA------------CRP-FDK-----DRDGFIIGEGAGIV 238 (413)
T ss_dssp ---------TTCBCC--------------------CCCTTTS------------CCT-TBT-----TCCSBCBBCEEEEE
T ss_pred ---------cccccC--------------------CCCCCCC------------cCC-CcC-----CCCCceEeccEEEE
Confidence 000000 0001111 233 322 23445589999999
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----H-HH
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----V-YC 354 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~-~~ 354 (445)
||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+++|.+++... . .+
T Consensus 239 vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al 318 (413)
T 3o04_A 239 ILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAI 318 (413)
T ss_dssp EEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHH
T ss_pred EEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHH
Confidence 99999999999999999999888764 23445566678999999999999999999999999998742 2 23
Q ss_pred HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.++...+++++++++..+||+.|++|++++++++.+|+++
T Consensus 319 ~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~ 360 (413)
T 3o04_A 319 KTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDN 360 (413)
T ss_dssp HHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhC
Confidence 334566667899999999999999999999999999999875
No 26
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.94 E-value=1.9e-26 Score=227.20 Aligned_cols=257 Identities=20% Similarity=0.168 Sum_probs=181.3
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+ ...++++..+|+.+|+++||+++|+++++||.|++|++++++. .+..+..++..+|++ .+|+++++++
T Consensus 35 ~~~gi~~r~-~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~a 111 (313)
T 1zow_A 35 KMTGIKERH-WADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMP-FPTVANMLQERLGTG-KVASMDQLAA 111 (313)
T ss_dssp HHHCCSEEE-CCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHHTCC-SCCEEEEECG
T ss_pred HhhCceEEE-ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEEEECCc
Confidence 588998754 4667899999999999999999999999999999999887764 445688888899996 4899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++...
T Consensus 112 Cas~~~al~~A~~~i~~g~~~~vLv~------------------------------------------------------ 137 (313)
T 1zow_A 112 CSGFMYSMITAKQYVQSGDYHNILVV------------------------------------------------------ 137 (313)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSCEEEE------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEE------------------------------------------------------
Confidence 99999999999999999998876110
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
..|...+ . .+| ++ ..++..++|||+|+||.+.+. +.
T Consensus 138 ------------------------g~e~~s~-~--------~~~-~d------~~~~~~~gdGa~A~vl~~~~~----~~ 173 (313)
T 1zow_A 138 ------------------------GADKLSK-I--------TDL-TD------RSTAVLFGDGAGAVIIGEVSE----GR 173 (313)
T ss_dssp ------------------------EEEEGGG-T--------CCT-TC------HHHHTTBCEEEEEEEEEECST----TC
T ss_pred ------------------------EEccccc-c--------cCc-cc------ccceeeeccceEEEEEEecCC----CC
Confidence 0000000 0 000 00 012234799999999987643 12
Q ss_pred CeeEEE-EEeEEee---cCCC-----CC-C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcC
Q 013344 298 PILGVF-RTFAAVG---VDPA-----IM-G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG 359 (445)
Q Consensus 298 ~~~~~i-~~~~~~~---~~p~-----~~-~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LG 359 (445)
++++.. .+.+... ..|. .+ + .....+++++|+++|++++|||+|++|+++..+...+.+.||
T Consensus 174 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg 253 (313)
T 1zow_A 174 GIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLG 253 (313)
T ss_dssp EEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHT
T ss_pred ceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhC
Confidence 233321 1211100 0011 01 1 134579999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 360 LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 360 l~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
++++++..+ +-.+||+.++++. ..|.++.+++.. +.|..+++ +|+|++++.+++++
T Consensus 254 ~~~~~~~~~--~~~~Gh~~~as~~----~~L~~~~~~~~~-~~g~~vl~~~~G~G~t~~~~~l~~ 311 (313)
T 1zow_A 254 ISKDKMSVS--VNKYGNTSAASIP----LSIDQELKNGKL-KDDDTIVLVGFGGGLTWGAMTIKW 311 (313)
T ss_dssp CCGGGBCCC--HHHHCBCGGGHHH----HHHHHHHHTTCC-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCHHHHHHh--HhhhCchHHHHHH----HHHHHHHHcCCC-CCCCEEEEEEEchhhhheEEEEEe
Confidence 999887654 3345666666554 445555444433 44543333 88999999888886
No 27
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.94 E-value=3.5e-26 Score=225.81 Aligned_cols=255 Identities=21% Similarity=0.215 Sum_probs=186.1
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..++.+..+|+.+|+++||+++|++|++||.|++|++++++. .+.++..++..+|++. +|+++++++
T Consensus 35 ~~~Gi~~r~~-~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~-~~~~a~~v~~~lgl~~-~~~~~v~~a 111 (317)
T 1hnj_A 35 TRTGIRERHI-AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIKG-CPAFDVAAA 111 (317)
T ss_dssp HHHCCCEEEE-CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCCS-SCEEEECCG
T ss_pred HHhCceEEEe-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCC-CeEEeeCcc
Confidence 4677766543 346788999999999999999999999999999999988764 4567888999999963 899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecC-ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVN-PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 216 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~-~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~ 216 (445)
|+|++.||..|+++|++|.++++... .... ..
T Consensus 112 Cas~~~al~~A~~~i~~g~~~~vlv~g~e~~---------------------------------s~-------------- 144 (317)
T 1hnj_A 112 CAGFTYALSVADQYVKSGAVKYALVVGSDVL---------------------------------AR-------------- 144 (317)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEEEEECH---------------------------------HH--------------
T ss_pred cHHHHHHHHHHHHHHHCCCCCEEEEEEechh---------------------------------cc--------------
Confidence 99999999999999999999887110 0000 00
Q ss_pred cccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcC
Q 013344 217 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 296 (445)
Q Consensus 217 ~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g 296 (445)
. .+| +. ..+...++|||+|+||.+.+.
T Consensus 145 -----------------------~------------------~~~----~d---~~~~~~~GdGA~A~vL~~~~~----- 171 (317)
T 1hnj_A 145 -----------------------T------------------CDP----TD---RGTIIIFGDGAGAAVLAASEE----- 171 (317)
T ss_dssp -----------------------H------------------SCT----TC---HHHHTTBCCEEEEEEEEEESS-----
T ss_pred -----------------------c------------------CCc----hh---cccceeeccccEEEEEEecCC-----
Confidence 0 000 00 001123799999999987642
Q ss_pred CCeeEEEEE-eEEe---ecCCC-------------CCCc--------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 013344 297 LPILGVFRT-FAAV---GVDPA-------------IMGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 351 (445)
Q Consensus 297 ~~~~~~i~~-~~~~---~~~p~-------------~~~~--------~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~ 351 (445)
..+++.+.+ .+.. -..|. ..+. ....+++++|+++|++++|||+|++|+++..+.
T Consensus 172 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~ 251 (317)
T 1hnj_A 172 PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRII 251 (317)
T ss_dssp CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHHH
T ss_pred CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH
Confidence 235554443 1110 00111 0111 345799999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 352 VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 352 ~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
..+.+.||++++++..+. ..+||+++++++..|.++.+++.. +.|..+++ +|+|++++.+++++
T Consensus 252 d~i~~~lg~~~~~~~~~~------~~~Gn~~~As~~~~L~~~~~~~~~-~~G~~vll~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 252 SATAKKLGMSMDNVVVTL------DRHGNTSAASVPCALDEAVRDGRI-KPGQLVLLEAFGGGFTWGSALVRF 317 (317)
T ss_dssp HHHHHHTTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHTTCS-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHcCCCHHHhHhhH------hhhCcHHHHHHHHHHHHHHHhCCC-CCCCEEEEEEEchhheeEEEEEEC
Confidence 999999999998876443 456777777788888888776654 55654443 89999998888764
No 28
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.94 E-value=9.1e-26 Score=230.68 Aligned_cols=250 Identities=20% Similarity=0.286 Sum_probs=184.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCcc-------------------------cchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ-------------------------RASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~~-------------------------~~~~a~~~~~~lG 124 (445)
+..+|+.+|+++||+++|+++++||. +++|+..+++.. ...++..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 45789999999999999999999995 777876554210 0135677778899
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+. .|+++|+++|+|++.||..|+++|++|++|++..... + ..++...+..+..
T Consensus 150 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~--------e---------------~~~~~~~~~~~~~-- 202 (408)
T 1j3n_A 150 FT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGT--------E---------------AAITPMAIGAFAV-- 202 (408)
T ss_dssp CC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE--------E---------------CCCSHHHHHHHHH--
T ss_pred CC--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeee--------c---------------ccCCHHHHHHHHh--
Confidence 94 6999999999999999999999999999999811000 0 0000000011100
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeE
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAV 284 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAv 284 (445)
.+.+ +.. +.+.+. ..+| |+. ..++..++||++++
T Consensus 203 ---------~~~l------------------------s~~-----~~~p~~--~~~p-fd~-----~~dg~v~geGaaav 236 (408)
T 1j3n_A 203 ---------MRAL------------------------STR-----NEEPEK--ASRP-FTL-----SRDGFVMGEGAGVL 236 (408)
T ss_dssp ---------TTCB------------------------CCC-----TTCHHH--HCCT-TBT-----TCCCBCBBCEEEEE
T ss_pred ---------cccc------------------------cCC-----CCCCCc--Cccc-CcC-----CCCceEEeeeEEEE
Confidence 0010 000 001111 1334 322 23455589999999
Q ss_pred EeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH-----HHHH
Q 013344 285 LLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ-----FVYC 354 (445)
Q Consensus 285 vL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~-----~~~~ 354 (445)
||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+++|++++.. ...+
T Consensus 237 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al 316 (408)
T 1j3n_A 237 VLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAI 316 (408)
T ss_dssp EEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHH
T ss_pred EEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHH
Confidence 99999999999999999999888764 3345566677899999999999999999999999999985 4556
Q ss_pred HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.||.+.+++++++++..+||+.|++|+.+++.++.+|+++
T Consensus 317 ~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~ 358 (408)
T 1j3n_A 317 KRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHG 358 (408)
T ss_dssp HHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcC
Confidence 777888778899999999999999999999999999999874
No 29
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.94 E-value=2.3e-26 Score=228.69 Aligned_cols=256 Identities=18% Similarity=0.198 Sum_probs=184.9
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+ ...++++..+|+.+|+++||+++|+++++||.|++++.++++. .+.++..++..+|++ ++|+++++++
T Consensus 45 ~~~gi~~r~-~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~a 121 (335)
T 1u6e_A 45 TRTGIKTRR-FAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQ-TPPAAPMVAASLGAK-GILGFDLSAG 121 (335)
T ss_dssp HHHCCSEEE-ECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCS-SSCHHHHHHHHHTCT-TSEEEEEECG
T ss_pred HhcCCceEe-ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEeeeccc
Confidence 477887654 2556789999999999999999999999999999999888765 456788888899996 5899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++..
T Consensus 122 C~s~~~al~~A~~~i~~g~~~~vLv------------------------------------------------------- 146 (335)
T 1u6e_A 122 AAGFGYALGAAADMIRGGGAATMLV------------------------------------------------------- 146 (335)
T ss_dssp GGHHHHHHHHHHHHHHHTSCSSEEE-------------------------------------------------------
T ss_pred cHHHHHHHHHHHHHHHcCCCCEEEE-------------------------------------------------------
Confidence 9999999999999999999877611
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
+..|... +.+++ ....++..++|||+|+||.+.+. .+
T Consensus 147 -----------------------~g~e~~s-------------~~~~~---~d~~~~~~~gDGA~A~vl~~~~~---~~- 183 (335)
T 1u6e_A 147 -----------------------VGTEKLS-------------PTIDM---YDRGNCFIFADGAAAVVVGETPF---QG- 183 (335)
T ss_dssp -----------------------EEEEECG-------------GGCCT---TCTTTTTTBCEEEEEEEEEECSS---CC-
T ss_pred -----------------------EEEcccc-------------cccCc---cccccceEeccccEEEEEEecCC---CC-
Confidence 0000000 00000 01123455899999999987542 12
Q ss_pred CeeEEEEE-eEE----eec---------CCC------CC-C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 013344 298 PILGVFRT-FAA----VGV---------DPA------IM-G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 348 (445)
Q Consensus 298 ~~~~~i~~-~~~----~~~---------~p~------~~-~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~ 348 (445)
+...+.+ .+. ... .|. .+ + .....+++++|+++|++++|||+|++|+++.
T Consensus 184 -i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~ 262 (335)
T 1u6e_A 184 -IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANS 262 (335)
T ss_dssp -BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCH
T ss_pred -eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH
Confidence 1112221 110 000 110 01 1 1234789999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC-CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 349 SQFVYCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 349 ~~~~~~~e~LGl~~~-~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
.+...+.+.||++++ ++..+. ..+|||++++++.+|+++.+++.. +.|..+++ +|+|++++.+++++
T Consensus 263 ~~~~~~~~~lg~~~~~~~~~~~------~~~Gnt~sAs~~~~L~~~~~~~~~-~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 263 RINELLVKNLQLRPDAVVANDI------EHTGNTSAASIPLAMAELLTTGAA-KPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp HHHHHHHHHHTCCTTCEECCTH------HHHCBCGGGHHHHHHHHHHHHTSS-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHcCCCchhhhhhhh------hhhCcHHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEehhheeEEEEEEe
Confidence 999999999999998 665443 445666666788899998876543 44544433 78899998888887
No 30
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.94 E-value=4.4e-25 Score=227.50 Aligned_cols=249 Identities=17% Similarity=0.242 Sum_probs=182.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~lG 124 (445)
...+|+.+|+++||+++|+++++|| .|++|+..++.. .....+..++..+|
T Consensus 97 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (437)
T 2gqd_A 97 RFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLG 176 (437)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhC
Confidence 3468999999999999999999999 999998766410 01135677888999
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~ 203 (445)
+ +.|+++|+++|+|++.||..|+++|++|++|++.... .. -+++..+..+..
T Consensus 177 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~------------------------~~~~~~~~~~~~- 229 (437)
T 2gqd_A 177 A--KGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEA------------------------PITHMAIAGFSA- 229 (437)
T ss_dssp C--CSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC------------------------CCSHHHHHHHHH-
T ss_pred C--CCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeecc------------------------ccCHHHHHHHHh-
Confidence 9 4699999999999999999999999999999981100 00 000000001100
Q ss_pred HHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCee
Q 013344 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 204 s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaA 283 (445)
.+. ++.++.+. ...+| |+. ..+++.++||+++
T Consensus 230 ----------~~~------------------------ls~~~~p~--------~~~~p-fd~-----~~~G~v~geGaaa 261 (437)
T 2gqd_A 230 ----------SRA------------------------LSTNDDIE--------TACRP-FQE-----GRDGFVMGEGAGI 261 (437)
T ss_dssp ----------TTC------------------------BCCCCCTT--------TSSCT-TCT-----TCCSBCBBCEEEE
T ss_pred ----------ccC------------------------ccCCCCCc--------cccCC-CCC-----CCCCceeeceEEE
Confidence 011 11111010 01344 442 2345568999999
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HH
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VY 353 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~ 353 (445)
+||++.+.|++.+.++++++.+++..... |...+.++..+++++|+++||+++||||+++|++++... ..
T Consensus 262 vvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~a 341 (437)
T 2gqd_A 262 LVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKA 341 (437)
T ss_dssp EEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHH
T ss_pred EEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHH
Confidence 99999999999999999999998876532 333455677999999999999999999999999998852 23
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+.+.+|....+++.++.+..+||+.|++|+.++++++.+|+++.
T Consensus 342 l~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ 385 (437)
T 2gqd_A 342 IKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSK 385 (437)
T ss_dssp HHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCC
Confidence 44556666667877777777999999999999999999999743
No 31
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.93 E-value=4.3e-26 Score=229.02 Aligned_cols=257 Identities=18% Similarity=0.128 Sum_probs=188.3
Q ss_pred eeeccccCCCCCCCCC--CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEecc---CCCcccchHHHHHHHHcCCCCCCceE
Q 013344 58 YRTALCKSKRGGFKDT--YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVL---APGSQRASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~--~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~---~~~~~~~~~a~~~~~~lGl~~~~~~~ 132 (445)
.+|++.+|+. +..++ ++.+|+.+|+++||+++|++|++||.|++++++ ++. ..++..++..+|++ +++++
T Consensus 36 ~~tGi~~r~~-a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~---~~~a~~v~~~lG~~-~~~~~ 110 (357)
T 3s3l_A 36 KLRGIESVTV-ASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDL---WPAASYVAHEAVGR-HVPAF 110 (357)
T ss_dssp HHHCCCEEEC-CCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSS---SCHHHHHHHHHTCS-SSCEE
T ss_pred HHcCceEEEe-cCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCccc---ccHHHHHHHHhCCC-CCcEE
Confidence 6899987654 33445 899999999999999999999999999999984 443 36788888899996 79999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCC--eEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYD--IGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~--~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++.+|+|+++||..|.++|++|.++ ++.
T Consensus 111 ~v~~aC~~~~~al~~A~~~i~sg~~~~~~vL------------------------------------------------- 141 (357)
T 3s3l_A 111 GLAQRCNGGMGAIELAGAYLGSGIGAGHAAL------------------------------------------------- 141 (357)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSSSSSEEE-------------------------------------------------
T ss_pred EEcCccHHHHHHHHHHHHHHHcCCCCCCEEE-------------------------------------------------
Confidence 99999999999999999999999987 651
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
++..|.. +.+.++.+. ...+..++|||+|+||...+
T Consensus 142 -----------------------------vvg~e~~------------s~~~~~~~~---~~~~~lfGDGA~A~vl~~~~ 177 (357)
T 3s3l_A 142 -----------------------------LTTGDRF------------AGPRIDRWN---SVDVTMYGDGAAALVLSTRD 177 (357)
T ss_dssp -----------------------------EEEEECC------------CTTTCCTTT---SSSSCCBCCEEEEEEEESSC
T ss_pred -----------------------------EEEEecc------------ccccccccc---ccCCcccccccEEEEEecCC
Confidence 1111110 000011000 01244589999999998753
Q ss_pred HHHhcCCCeeEEEEEeEEe--e------------cCCC-----CC---C----------------c---cHHHHHHHHHH
Q 013344 291 VAMRKGLPILGVFRTFAAV--G------------VDPA-----IM---G----------------V---GPAVAIPAAVK 329 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~~~~--~------------~~p~-----~~---~----------------~---~~~~ai~~aL~ 329 (445)
. . ..+.++... + .+|. .+ + . ....+++++|+
T Consensus 178 ~----~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~L~ 249 (357)
T 3s3l_A 178 G----F----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAAKTQALE 249 (357)
T ss_dssp C----S----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHH
T ss_pred C----C----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHHHHHHHHHHHH
Confidence 1 1 122222111 0 0110 00 0 0 12368899999
Q ss_pred HcCCCCCCccEEEe-cCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe
Q 013344 330 SAGLQLDDIDLFEI-NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC 408 (445)
Q Consensus 330 ~aGl~~~DID~~e~-h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~ 408 (445)
++|++++|||+|.+ |+++.. ...+.++||++++++.. .+++.+||||+++++.+|.++.+++.. +.|+.+++
T Consensus 250 ~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~-----~~~~~~GNt~aAsipl~L~~~~~~g~l-~~Gd~vll 322 (357)
T 3s3l_A 250 DAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSW-----AYGRTTGHVGAGDQYAGLAHLVENALV-QPGDRVLL 322 (357)
T ss_dssp HTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTH-----HHHHHHCBCTTCHHHHHHHHHHHTTCC-CTTCEEEE
T ss_pred HcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHH-----HhccccccchHhHHHHHHHHHHHcCCC-CCCCEEEE
Confidence 99999999999996 999988 88899999999999764 345789999999999999999887765 67764443
Q ss_pred --ecccceeEEEEEEcccccc
Q 013344 409 --IGTGMGAAAVFERGDCADE 427 (445)
Q Consensus 409 --~G~G~~~a~~l~~~~~~~~ 427 (445)
+|+|++|+.+++++.....
T Consensus 323 ~~fG~G~t~~a~ll~~~~~p~ 343 (357)
T 3s3l_A 323 FGGGAGYTCTAAVVEILRMPA 343 (357)
T ss_dssp ECCBTTTEEEEEEEEECCCC-
T ss_pred EEEchhhhheeeeEEeccCCC
Confidence 8999999999988866533
No 32
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.93 E-value=6.2e-26 Score=226.29 Aligned_cols=257 Identities=20% Similarity=0.170 Sum_probs=186.2
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..++++..+|+.+|+++||+++|+++++||.|++|+.++++. .+..+..++..+|++ .+|+++++++
T Consensus 44 ~~~Gi~~R~~-~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~a 120 (339)
T 1mzj_A 44 TRTGIRSRRI-AEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAA 120 (339)
T ss_dssp HHHCCSEEEC-CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECG
T ss_pred HhcCceEEEE-eCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHhCCC-CccEEEcccc
Confidence 4677776543 345789999999999999999999999999999999988764 445788888899996 3899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++...
T Consensus 121 Cas~~~Al~~A~~~i~~G~~~~vLv~------------------------------------------------------ 146 (339)
T 1mzj_A 121 CAGFCHALSIAADAVESGGSRHVLVV------------------------------------------------------ 146 (339)
T ss_dssp GGHHHHHHHHHHHHHHHSSCSCEEEE------------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHCCCCCEEEEE------------------------------------------------------
Confidence 99999999999999999998876110
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
..|. .. +.++++. ..++..++|||+|+||.+.+. .
T Consensus 147 ------------------------g~e~-~s------------~~~~~~d---~~~~~~~GdGA~A~vL~~~~~-----~ 181 (339)
T 1mzj_A 147 ------------------------ATER-MT------------DVIDLAD---RSLSFLFGDGAGAAVVGPSDV-----P 181 (339)
T ss_dssp ------------------------EEEE-GG------------GGSCSSC---TTTTTTBCEEEEEEEEEEESS-----C
T ss_pred ------------------------EEcc-cc------------cccCccc---cccceEeccCceEEEEEecCC-----C
Confidence 0000 00 0000000 112234799999999987542 1
Q ss_pred CeeEEEE-EeEE----eecC---CCC-------------CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 013344 298 PILGVFR-TFAA----VGVD---PAI-------------MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 348 (445)
Q Consensus 298 ~~~~~i~-~~~~----~~~~---p~~-------------~~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~ 348 (445)
.+++..+ +.+. ...+ |.. .+ .....+++++|+++|++++|||+|++|+.+.
T Consensus 182 ~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~ 261 (339)
T 1mzj_A 182 GIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANL 261 (339)
T ss_dssp CBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCH
T ss_pred CeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH
Confidence 2332222 1110 0010 110 01 2345789999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCC-CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEcc
Q 013344 349 SQFVYCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 349 ~~~~~~~e~LGl~~~-~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
.+...+.+.||++++ ++..+. +.+||+++++++..|.++.+++.. +.|..+++ +|+|++++++++++.
T Consensus 262 ~~~d~i~~~lg~~~~~~~~~~~------~~~Gn~~sAs~~~~L~~~~~~g~~-~~G~~vll~~~G~G~t~~~~~l~~~ 332 (339)
T 1mzj_A 262 RIIDVLVDRLGVPEHVVVSRDA------EDTGNTSSASVALALDRLVRSGAV-PGGGPALMIGFGAGLSYAGQALLLP 332 (339)
T ss_dssp HHHHHHHHHHTCCTTSEECCTH------HHHCBCTTHHHHHHHHHHHHHTSS-CTTCEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHHHHhCCCccceeeehh------hhcCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEEchhheeEEEEEEeC
Confidence 999999999999998 876442 467888888888888888776654 55654443 899999998888874
No 33
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.93 E-value=1.2e-25 Score=228.31 Aligned_cols=238 Identities=13% Similarity=0.063 Sum_probs=172.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~ 153 (445)
++.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|+ ++++++++.+|+|+++||..|.++|+
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~-~p~~a~~v~~~LGl--~~~~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRA-YPAMAIEVQNALGL--GGFAFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCS-BSCHHHHHHHHTTC--CSEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-ccHHHHHHHHHhCC--CCeEEEECCccHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999988775 45667888889999 48999999999999999999999999
Q ss_pred cCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCCC
Q 013344 154 AGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKT 233 (445)
Q Consensus 154 sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~ 233 (445)
+|.++++.+
T Consensus 193 ~g~~~~vLv----------------------------------------------------------------------- 201 (392)
T 3led_A 193 GGSVDAVLM----------------------------------------------------------------------- 201 (392)
T ss_dssp TTSCSEEEE-----------------------------------------------------------------------
T ss_pred CCCCCEEEE-----------------------------------------------------------------------
Confidence 999887611
Q ss_pred CCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeec--
Q 013344 234 GDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-- 311 (445)
Q Consensus 234 g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~-- 311 (445)
+..|. +...++... ...+..++|||+|+||...+... ....+.+......
T Consensus 202 -------vg~E~-------------~S~~~d~~d---r~t~~lFGDGA~A~vl~~~~~~~-----~~~~i~~~~~~s~~~ 253 (392)
T 3led_A 202 -------VNPEI-------------CSGHLNFRD---RDSHFIFGDVATAAIVERADDAQ-----GGWSILGTKLKTQFS 253 (392)
T ss_dssp -------EEEEE-------------GGGGCCTTC---TTTTTTBCEEEEEEEEEEGGGCC-----SSEEEEEEEEEECCC
T ss_pred -------Eeehh-------------cCCcCCcCc---ccCCcccccccEEEEEEecCCCC-----CCCeEEEEEEEEccc
Confidence 00000 000000000 01234489999999998764210 1112332221100
Q ss_pred -------------CCCCCC--------cc----------HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHc-C
Q 013344 312 -------------DPAIMG--------VG----------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKL-G 359 (445)
Q Consensus 312 -------------~p~~~~--------~~----------~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~L-G 359 (445)
.+..+. .+ ...+++++|+++|++++|||+|.+||++..+...+.++| |
T Consensus 254 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hqan~~i~~~~~~~llg 333 (392)
T 3led_A 254 NNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGLKRMWLHQANINMNEIIGRKVLG 333 (392)
T ss_dssp SSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECSSCHHHHHHHHHHHHT
T ss_pred cccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEcCCCHHHHHHHHHHhcC
Confidence 010000 01 125789999999999999999999999999999999996 6
Q ss_pred --CCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 360 --LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 360 --l~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
++.+++..+. ..+|||++++++.+|+++.+ .. +.|..+++ +|+|++|+++++++
T Consensus 334 l~~~~~k~~~~l------~~~GNtssAsipl~L~~~~~--~~-~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 334 RDPTRDENVIIL------DDYANTSSAGSIIAFHKHQD--DM-AQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp SCCCTTTBCCCH------HHHCBCGGGHHHHHHHHCCT--TC-CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred CCCCHHHHHHHH------hhhCccHHHHHHHHHHHHhC--CC-CCCCEEEEEEEChhhEeEEEEEEE
Confidence 5677876666 88999999999999998733 22 55654433 99999998888875
No 34
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=99.93 E-value=2.7e-26 Score=232.67 Aligned_cols=244 Identities=14% Similarity=0.121 Sum_probs=178.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe-cCcCcHHHHHHHHHHH
Q 013344 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAA 150 (445)
Q Consensus 72 ~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-~~~CsSgl~Al~~A~~ 150 (445)
+++..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..++++++ +++|+|++.||..|++
T Consensus 81 ~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~ 158 (382)
T 1u0m_A 81 EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM--MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHD 158 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCC--SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCC--CCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999988732 45677888889999755899999 9999999999999999
Q ss_pred HHHcCCCCeEec-----CccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce
Q 013344 151 AIKAGFYDIGSV-----NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225 (445)
Q Consensus 151 ~I~sG~~~~v~~-----~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~ 225 (445)
+|++|.++++.+ .+...++ ++-.+
T Consensus 159 ~i~~g~~~~vLv~g~e~~s~~~~~--------------------~d~~~------------------------------- 187 (382)
T 1u0m_A 159 FCTAYPEANALIVACEFCSLCYQP--------------------TDLGV------------------------------- 187 (382)
T ss_dssp HHHHSTTCEEEEEEEEEGGGGCCT--------------------TCCSH-------------------------------
T ss_pred HHHcCCCCEEEEEEEeccchhcCc--------------------ccCCH-------------------------------
Confidence 999999988711 0000000 00000
Q ss_pred ecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEE
Q 013344 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRT 305 (445)
Q Consensus 226 ~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~ 305 (445)
+ +..++..++|||+|+||.+.+. .+. ++.+
T Consensus 188 ----------------------------~---------------~~~~~~lfGDGA~A~vL~~~~~---~g~----~i~~ 217 (382)
T 1u0m_A 188 ----------------------------G---------------SLLCNGLFGDGIAAAVVRGRGG---TGV----RLER 217 (382)
T ss_dssp ----------------------------H---------------HHHHHHHBCEEEEEEEEETTTC---SEE----EEEE
T ss_pred ----------------------------H---------------HhhccchhcCCcEEEEEeccCC---CCc----EEEE
Confidence 0 0000122789999999987542 111 2333
Q ss_pred eEEeec--------------------CCCC---CCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCC
Q 013344 306 FAAVGV--------------------DPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP 362 (445)
Q Consensus 306 ~~~~~~--------------------~p~~---~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~ 362 (445)
+..... .+.. ...... +++++|+++|++++|||+|++|+++..+...+.+.||+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i~d~~~~~lgl~~ 296 (382)
T 1u0m_A 218 NGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDP 296 (382)
T ss_dssp EEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCG
T ss_pred eeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCH
Confidence 222100 0001 112234 8999999999999999999999999999999999999999
Q ss_pred CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEE--eecccceeEEEEEEcc
Q 013344 363 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM--CIGTGMGAAAVFERGD 423 (445)
Q Consensus 363 ~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~--~~G~G~~~a~~l~~~~ 423 (445)
++++++. ...+.+|||++++++.+|.++.+++.. +.|..++ .+|+|++++++++++.
T Consensus 297 ~k~~~s~---~~~~~~Gnt~sAsi~~~L~~~~~~g~~-~~Gd~vll~~~G~G~t~~~~vl~~~ 355 (382)
T 1u0m_A 297 HAFRFSR---ATLTEYGNIASAVVLDALRRLFDEGGV-EEGARGLLAGFGPGITAEMSLGCWQ 355 (382)
T ss_dssp GGGHHHH---HHHHHTCBCTTHHHHHHHHHHHHSCCC-CSSCCCEEEEEETTTEEEEEEEEEE
T ss_pred HHHHHHH---HHHHHhCCchhhHHHHHHHHHHHhcCC-CCCCEEEEEEEcccceeEEEEEEEe
Confidence 9987542 122889999999999999999887754 5665333 3899999988888774
No 35
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=99.93 E-value=1.1e-25 Score=223.64 Aligned_cols=258 Identities=19% Similarity=0.154 Sum_probs=184.0
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..+++..+|+.+|+++||+++|+ ++||.|++++.++++. .+..+..++..+|++. +|+++++++
T Consensus 38 ~~~Gi~~R~~--~~~~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~-~p~~a~~v~~~lgl~~-~~~~~v~~a 111 (331)
T 2x3e_A 38 SRTGVRQRHI--AGDLGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFC-CPATAPRVAARLGLVG-ALAFDLSAA 111 (331)
T ss_dssp HHHCCCEEEC--CTTCCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEE-ESCSHHHHHHHTTCTT-SEEEEEECG
T ss_pred HhhCceEEEe--cCCCCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCC-CChHHHHHHHHhCCCC-CcEEEEcCc
Confidence 4778876643 22378899999999999999999 8999999999888764 3456788888999964 899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++...
T Consensus 112 Cas~~~Al~~A~~~i~~g~~~~vLv~------------------------------------------------------ 137 (331)
T 2x3e_A 112 ATGFVYGLASVGSLISAGLADSALLV------------------------------------------------------ 137 (331)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEE------------------------------------------------------
T ss_pred ChHHHHHHHHHHHHHHcCCCCEEEEE------------------------------------------------------
Confidence 99999999999999999998887110
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
..|. .. +.++++. ..++..++|||+|+||.+.+.+ .+.
T Consensus 138 ------------------------g~e~-~s------------~~~~~~d---~~~~~~~GdGA~A~vL~~~~~a--~~~ 175 (331)
T 2x3e_A 138 ------------------------GVDT-FS------------HTLDPAD---RSTRALFGDGAGAVVLRAGDAE--EEG 175 (331)
T ss_dssp ------------------------EEEC-GG------------GGSCTTC---HHHHHHBCCEEEEEEEEEECTT--STT
T ss_pred ------------------------Eeec-cc------------cCCCccc---cccceeeccccEEEEEEecCCC--CCC
Confidence 0000 00 0000000 0011127899999999876533 122
Q ss_pred CeeEEEEE-eEE----eecC------C------CC---CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 013344 298 PILGVFRT-FAA----VGVD------P------AI---MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 349 (445)
Q Consensus 298 ~~~~~i~~-~~~----~~~~------p------~~---~~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~ 349 (445)
.+++.... .+. ...+ | .+ .+ .....+++++|+++|++++|||+|++|+++..
T Consensus 176 ~i~~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~ 255 (331)
T 2x3e_A 176 ALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTR 255 (331)
T ss_dssp BEEEEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH
T ss_pred ceEEEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH
Confidence 33333221 110 0011 0 00 01 23357899999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEccc
Q 013344 350 QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGDC 424 (445)
Q Consensus 350 ~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~~ 424 (445)
+...+.+.||++++++..+. +.+|||++++++..|.++.+++.. +.|..+++ +|+|++++++++++..
T Consensus 256 ~~d~~~~~lg~~~~~~~~~~------~~~Gnt~sAs~~~~L~~~~~~~~~-~~G~~vll~~~G~G~~~~~~~l~~~~ 325 (331)
T 2x3e_A 256 ILAAVADQLDLPVERVVSNI------AEVGNTVAASIPLALAHGLRQGIL-RDGGNMVLTGFGAGLTWGSVALRWPK 325 (331)
T ss_dssp HHHHHHHHHTCCGGGBCCCH------HHHCBCGGGHHHHHHHHHHHTTCS-CTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHHHHHcCCCHHHHhhhH------hhhCcHHHHHHHHHHHHHHHhCCC-CCCCEEEEEEEeHHhhheeeEEEECC
Confidence 99999999999999887543 467778888888899888776654 55654443 8999999988888743
No 36
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.93 E-value=7.5e-25 Score=225.79 Aligned_cols=249 Identities=18% Similarity=0.206 Sum_probs=180.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCC-CCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHc
Q 013344 74 YPDDLLAPVLKAVIEKTNVDP-SEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYA 123 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~-~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~l 123 (445)
...+|+.+|+++||+++|+++ ++|| .|++|+..++.. ....++..++..+
T Consensus 96 ~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (438)
T 2iwz_A 96 SPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence 356899999999999999998 8888 599998765420 0124677788899
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
|+ +.|+++|+++|+|++.||..|+++|++|++|++.... .. -+++..+..+..
T Consensus 176 gl--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~------------------------~~~p~~~~~~~~ 229 (438)
T 2iwz_A 176 KL--KGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDS------------------------CISPLSLAGFSR 229 (438)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEC------------------------CCSHHHHHHHHH
T ss_pred CC--CCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeeh------------------------hcCHHHHHHHHh
Confidence 99 4699999999999999999999999999999881100 00 000000001100
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
.+.+... .+ ++. ..+| |+. ..+...++||++
T Consensus 230 -----------~~~ls~~--------~~------------p~~------------~~~p-fd~-----~~~G~~~geGAa 260 (438)
T 2iwz_A 230 -----------ARALSTN--------SD------------PKL------------ACRP-FHP-----KRDGFVMGEGAA 260 (438)
T ss_dssp -----------TTCBCCC--------SC------------TTT------------SCCT-TCT-----TCCSBCBBCEEE
T ss_pred -----------cCCcCCC--------CC------------CCc------------cccc-CCC-----CCCCEEeeceEE
Confidence 0111000 00 011 1344 443 224456899999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----H-H
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----F-V 352 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~-~ 352 (445)
++||++.+.|++.+.++++++.+++..... |...+.+...+++++|+++|++++||||+|+|++++.. + .
T Consensus 261 avvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~ 340 (438)
T 2iwz_A 261 VLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENK 340 (438)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHH
T ss_pred EEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccCHHHHH
Confidence 999999999999999999999998876532 44456677899999999999999999999999999875 2 2
Q ss_pred HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 353 YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 353 ~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
.+.+.+|....+++.++.+..+||+.|++|+.++++++.+|+++.
T Consensus 341 al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ 385 (438)
T 2iwz_A 341 AIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQK 385 (438)
T ss_dssp HHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCc
Confidence 333445655567777777777899999999999999999998743
No 37
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.93 E-value=2.4e-25 Score=226.53 Aligned_cols=250 Identities=15% Similarity=0.120 Sum_probs=181.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe-cCcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-~~~CsSgl~Al~~A~~~ 151 (445)
++..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..++++++ +++|+|++.||..|+++
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~ 188 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFI--APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY 188 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCc--cChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999988843 45678888889999765778998 99999999999999999
Q ss_pred HHcCCCCeEe-----cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 152 IKAGFYDIGS-----VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 152 I~sG~~~~v~-----~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
|++|.++++. ..+...+ |+-.|.+
T Consensus 189 i~~G~~~~vLv~g~e~~s~~~~---------------------~~~~r~~------------------------------ 217 (393)
T 1ted_A 189 VRAHPAMKALVVCIELCSVNAV---------------------FADDIND------------------------------ 217 (393)
T ss_dssp HHHSTTCEEEEEEEEECGGGCC---------------------CCSSHHH------------------------------
T ss_pred HHcCCCCEEEEEEEEeccccCC---------------------CCCCHHH------------------------------
Confidence 9999998871 1110000 0000000
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
...+..++|||+|+||.+.+.+...+. .+.++.++
T Consensus 218 --------------------------------------------~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~ 252 (393)
T 1ted_A 218 --------------------------------------------VVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSS 252 (393)
T ss_dssp --------------------------------------------HHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEE
T ss_pred --------------------------------------------hhhhhhhcCccEEEEEecCCCccccCc-ceeeeecc
Confidence 001122789999999987643211111 23455554
Q ss_pred EEeec-CC-C------------C-CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC
Q 013344 307 AAVGV-DP-A------------I-MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 307 ~~~~~-~p-~------------~-~~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~ 363 (445)
+.... +. . . .+ .....+++++|+++|++++|||+|++|+++..+...+.+.||++++
T Consensus 253 ~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i~d~~~~~lgl~~~ 332 (393)
T 1ted_A 253 FSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAE 332 (393)
T ss_dssp EEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGG
T ss_pred ceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHHHHHHHHHcCCCHH
Confidence 33211 10 0 0 11 1234688999999999999999999999999999999999999999
Q ss_pred CcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEcc
Q 013344 364 KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 364 ~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
++..+.- ..+.+|||++++++.+|.++.+++...+.|..+++ +|+|++++++++++-
T Consensus 333 k~~~s~~---~~~~~GNt~sAsi~~~L~~~~~~g~~~~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 333 LAAQSWD---VLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp GGHHHHH---HHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHH---HHHhhCCchHhHHHHHHHHHHhcCccCCCCCeEEEEEeccchhhhhhheeec
Confidence 9864311 12889999999999999999877653125654433 899999988888764
No 38
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=99.93 E-value=2.8e-25 Score=219.75 Aligned_cols=257 Identities=19% Similarity=0.199 Sum_probs=180.4
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ..++.+..+|+.+|+++||+++|++|++||.|++|+.+++.. .+.++..++..+|+ ++|+++++++
T Consensus 34 ~~~Gi~~r~~-~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl--~~~~~~v~~a 109 (322)
T 1ub7_A 34 TRTGIKERRV-AAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAG 109 (322)
T ss_dssp HHTCCCEEEE-CCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECS
T ss_pred HhcCceEEee-cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCC--CCEEEeeCcc
Confidence 4677776543 345789999999999999999999999999999999887764 44578888899999 5899999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++...
T Consensus 110 Cas~~~al~~A~~~i~~g~~~~vlv~------------------------------------------------------ 135 (322)
T 1ub7_A 110 CPGWIYALAQAHALVEAGLAQKVLAV------------------------------------------------------ 135 (322)
T ss_dssp TTHHHHHHHHHHHHHHTTSCSEEEEE------------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHcCCCCEEEEE------------------------------------------------------
Confidence 99999999999999999999887110
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
..|. .. +.++++. ..++..++|||+|+||.+.+. +.
T Consensus 136 ------------------------g~e~-~s------------~~~~~~d---~~~~~~~GdGA~A~vL~~~~~----~~ 171 (322)
T 1ub7_A 136 ------------------------GAEA-LS------------KIIDWND---RATAVLFGDGGGAAVVGKVRE----GY 171 (322)
T ss_dssp ------------------------EEEC-GG------------GTSCTTC---HHHHTTBCCEEEEEEEECCCT----TC
T ss_pred ------------------------Eech-hc------------cccChhh---cccceeeccccEEEEEEecCC----CC
Confidence 0000 00 0000000 011234799999999987643 22
Q ss_pred CeeEEEE-EeEEe----ecC------CCC---------CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 013344 298 PILGVFR-TFAAV----GVD------PAI---------MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 349 (445)
Q Consensus 298 ~~~~~i~-~~~~~----~~~------p~~---------~~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~ 349 (445)
.+++... +.+.. ..+ |.. .+ .....+++++|+++|++++|||+|++|+++..
T Consensus 172 ~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~ 251 (322)
T 1ub7_A 172 GFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLR 251 (322)
T ss_dssp EEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH
T ss_pred ceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH
Confidence 3343332 11110 000 211 01 23457999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEcc
Q 013344 350 QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 350 ~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
+...+.+.||++++++..+ +-.+||..++++...+.+++ +++.. +.|..+++ +|.|++++.+++++.
T Consensus 252 ~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~l~~~l----~~g~~-~~g~~~l~~~~G~G~~~~~~vl~~~ 320 (322)
T 1ub7_A 252 IIDAARERLGLPWERVAVN--VDRYGNTSTASIPLALKEAV----DAGRI-REGDHVLLVSFGAGLTWAAAVLTWG 320 (322)
T ss_dssp HHHHHHHTTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHH----HHTSS-CTTCEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHHHcCCCHHHHHHH--HHhhCcHHHHHHHHHHHHHH----HhCCC-CCCCEEEEEEEChhheeEEEEEEeC
Confidence 9999999999999888644 33577887777766544443 33332 33433332 788889888888763
No 39
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=99.93 E-value=1.1e-25 Score=227.38 Aligned_cols=244 Identities=16% Similarity=0.151 Sum_probs=178.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEec-CcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~-~~CsSgl~Al~~A~~~ 151 (445)
.+..+|+.+|+++||+++|++|++||.|+++++++.. .+..+..++..+|++..+++++++ ++|+|++.||..|+++
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~ 170 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGII--IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASL 170 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCC--CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999988643 356778888899997557999997 8999999999999999
Q ss_pred HHcCCCCeEe-----cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 152 IKAGFYDIGS-----VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 152 I~sG~~~~v~-----~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
|++|.++++. ..+.... .
T Consensus 171 i~~g~~~~vLv~g~e~~s~~~~----------------------~----------------------------------- 193 (374)
T 2h84_A 171 AKASPRNRILVVCTEVCSLHFS----------------------N----------------------------------- 193 (374)
T ss_dssp HTTCTTCEEEEEEEECCGGGCC----------------------C-----------------------------------
T ss_pred HHcCCCCEEEEEEEEecchhhc----------------------C-----------------------------------
Confidence 9999998871 1110000 0
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
+.+.+ +..++..++|||+|+||.+.+.++..+ +. ++.++
T Consensus 194 -----------------------~~dr~---------------~~~~~~lfGDGA~A~vL~~~~~~~~~~--~~-~l~~~ 232 (374)
T 2h84_A 194 -----------------------TDGGD---------------QMVASSIFADGSAAYIIGCNPRIEETP--LY-EVMCS 232 (374)
T ss_dssp -----------------------SSSHH---------------HHHHHHHBCCEEEEEEEESSCCTTCCC--CE-EEEEE
T ss_pred -----------------------CCCHH---------------HHhhhhhhccCcEEEEEecCCCcccCC--ce-eEEee
Confidence 00000 000112278999999998765432112 22 44444
Q ss_pred EEeecC-----------CCC----CC--------ccHHHHHHHHHHHcC------CCCCCccEEEecCCChHHHHHHHHH
Q 013344 307 AAVGVD-----------PAI----MG--------VGPAVAIPAAVKSAG------LQLDDIDLFEINEAFASQFVYCRNK 357 (445)
Q Consensus 307 ~~~~~~-----------p~~----~~--------~~~~~ai~~aL~~aG------l~~~DID~~e~h~~~~~~~~~~~e~ 357 (445)
+....+ +.- ++ .....+++++|+++| ++++|||+| +|+++..+...+.+.
T Consensus 233 g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~~~~~ 311 (374)
T 2h84_A 233 INRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMNIENS 311 (374)
T ss_dssp EEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHHHHHH
T ss_pred eeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHHHHHH
Confidence 332111 000 01 123478899999999 999999999 999999999999999
Q ss_pred cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceee--EEEeecccceeEEEEEEcc
Q 013344 358 LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGV--ISMCIGTGMGAAAVFERGD 423 (445)
Q Consensus 358 LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~--~~~~~G~G~~~a~~l~~~~ 423 (445)
||++++++..+. ...+.+|||++++++.+|+++.+++. .|. ..+++|+|++|+++++++-
T Consensus 312 lgl~~~k~~~s~---~~~~~~Gnt~sasi~~~L~~~~~~~~---~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 312 LGIDPKQTKNTW---DVYHAYGNMSSASVIFVMDHARKSKS---LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp TTCCGGGGHHHH---HHHHHHCBCTTHHHHHHHHHHHTCSC---CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCCHHHHHHHH---HHHHHhCCchhhHHHHHHHHHHhhcC---CCCeEEEEEeccchhhhhhhheec
Confidence 999999987431 12388999999999999999987654 353 3344999999988888763
No 40
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.93 E-value=5.6e-24 Score=218.83 Aligned_cols=246 Identities=19% Similarity=0.218 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc--------------------c-----cchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS--------------------Q-----RASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~--------------------~-----~~~~a~~~~~~lGl 125 (445)
..+|+.+|+++||+++|+++++|| .|++|+..++.. . ...++..++..+|+
T Consensus 93 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 172 (430)
T 1ox0_A 93 YSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA 172 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC
Confidence 458999999999999999999999 589988765420 0 01345667778999
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
. .|+++|+++|+|++.||..|+++|++|++|++..... +.. +++..+..+..
T Consensus 173 ~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~--------e~~---------------~~p~~~~~~~~--- 224 (430)
T 1ox0_A 173 N--GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGT--------EAS---------------ITPFAIAGFQA--- 224 (430)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE--------ECC---------------CSHHHHHHHHH---
T ss_pred C--CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeee--------ccc---------------cCHHHHHHHHh---
Confidence 4 6999999999999999999999999999999811000 000 00000000000
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvv 285 (445)
.+ .++.++.++. ..+| |+. ..+.+.++|||+++|
T Consensus 225 --------~~------------------------~ls~~~~p~~--------~~~p-Fd~-----~~~g~~~geGAaavv 258 (430)
T 1ox0_A 225 --------LT------------------------ALSTTEDPTR--------ASIP-FDK-----DRNGFVMGEGSGMLV 258 (430)
T ss_dssp --------TT------------------------CBCCCSSTTS--------SSCT-TBT-----TCCSBCBCCEEEEEE
T ss_pred --------CC------------------------CccCCCCCCC--------CCCC-CCC-----CCCCccccceEEEEE
Confidence 01 1111111111 1233 432 246677999999999
Q ss_pred eeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH-----HHH
Q 013344 286 LMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV-----YCR 355 (445)
Q Consensus 286 L~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~-----~~~ 355 (445)
|++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+++|++++.... .+.
T Consensus 259 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~ 338 (430)
T 1ox0_A 259 LESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIV 338 (430)
T ss_dssp EEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHH
T ss_pred ECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHH
Confidence 9999999999999999999887653 234445667789999999999999999999999999998642 233
Q ss_pred HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 356 e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+.+|- .-+++..++. +||+.|++|+.++++++.+|+++.
T Consensus 339 ~~~g~-~~~v~s~k~~--~GH~~gAaG~~~~i~~~~~l~~~~ 377 (430)
T 1ox0_A 339 AVLGK-EVPVSSTKSF--TGHLLGAAGAVEAIVTIEAMRHNF 377 (430)
T ss_dssp HHHCS-SSEEECTHHH--HCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHhCC-Cceecccccc--cccchhhHHHHHHHHHHHHHhcCc
Confidence 44554 2356666655 699999999999999999999753
No 41
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.93 E-value=2.1e-25 Score=219.22 Aligned_cols=256 Identities=18% Similarity=0.181 Sum_probs=179.3
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. . .+.+..+|+.+|+++||+++|+++++||.|++|+.++++. .+.++..++..+|++. +|+++++++
T Consensus 35 ~~~Gi~~r~~-~-~~~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~-~~~~a~~v~~~lgl~~-~~~~~v~~~ 110 (309)
T 2ebd_A 35 TRTGIKERRI-A-KEETITYMATQAAKEALREANLSPEELDLIILATLTPQKR-FPSTACLVQAQLKAKG-VYAFDISAA 110 (309)
T ss_dssp HHHCCCEEEE-C-SSCCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSS-SSCHHHHHHHHHTCTT-CEEEEEECG
T ss_pred HHhCceeeee-c-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCC-ceEEecCcc
Confidence 3566665442 1 2378899999999999999999999999999999987764 4567888999999964 799999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+|++.||..|+++|++|.++++...
T Consensus 111 C~s~~~al~~A~~~i~~g~~~~vlv~------------------------------------------------------ 136 (309)
T 2ebd_A 111 CSGFIYALDIADSFIKSGKAKNVLVI------------------------------------------------------ 136 (309)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEE------------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHCCCCCEEEEE------------------------------------------------------
Confidence 99999999999999999999887110
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
..|. .. +.++++ ...++..++|||+|+||.+.+.+ .
T Consensus 137 ------------------------g~e~-~s------------~~~~~~---~~~~~~~~gdGaaA~vL~~~~~~----~ 172 (309)
T 2ebd_A 137 ------------------------GAEK-LS------------EAVDWE---DRSTCVLFGDGAGAVVVTRSEDK----S 172 (309)
T ss_dssp ------------------------EEEE-GG------------GTCCTT---CTTTTTTBCEEEEEEEEEECSSS----C
T ss_pred ------------------------Eecc-cc------------cccCcc---chhhccccccccEEEEEEecCCC----C
Confidence 0000 00 000000 01123458999999999876532 1
Q ss_pred CeeEEEEEeEEe---e-cCC-----CCCCc--------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCC
Q 013344 298 PILGVFRTFAAV---G-VDP-----AIMGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL 360 (445)
Q Consensus 298 ~~~~~i~~~~~~---~-~~p-----~~~~~--------~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl 360 (445)
.+++...+.... . ..| ...+. ....+++++|+++|++++|||+|++|+++..+...+.+.||+
T Consensus 173 ~i~~~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~lg~ 252 (309)
T 2ebd_A 173 DILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNI 252 (309)
T ss_dssp EEEEEEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHHTTC
T ss_pred ceeEEEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCC
Confidence 133332221000 0 011 00111 345799999999999999999999999999999999999999
Q ss_pred CCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 361 DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 361 ~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
+++++..+ +-.+||+.++++...+.+++. ++.. +.|..+++ +|.|++++.+++++
T Consensus 253 ~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~----~g~~-~~G~~~l~~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 253 PKEKVFVN--IQKYGNTSAASIPIALHEAIK----EGKV-KRGDLILMTAMGGGLTWGAVLLRY 309 (309)
T ss_dssp CGGGBCCC--HHHHCBCGGGHHHHHHHHHHH----TTCC-CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHhhhh--HhhhcchHHHHHHHHHHHHHH----cCCC-CCCCEEEEEEEchhhhhEEEEEEC
Confidence 99887644 345788888877666655543 3322 33443332 78899998888764
No 42
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=9e-24 Score=217.38 Aligned_cols=245 Identities=18% Similarity=0.211 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHHcCCC---CCCCCcEEEEeccCCCcc-------------------------cchHHHHHHHHcCCC
Q 013344 75 PDDLLAPVLKAVIEKTNVD---PSEVGDIVVGTVLAPGSQ-------------------------RASECRMAAFYAGFP 126 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~---~~dId~vi~g~~~~~~~~-------------------------~~~~a~~~~~~lGl~ 126 (445)
..+|+.+|+++||+++|++ +++| .|++|+..+++.. ....+..++..+|+
T Consensus 99 ~~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl- 176 (434)
T 2gp6_A 99 LQRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA- 176 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC-
Confidence 3689999999999999983 3344 5888887665410 01246677789999
Q ss_pred CCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEec---CccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHH
Q 013344 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSV---NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203 (445)
Q Consensus 127 ~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~---~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~ 203 (445)
+.|+++|+++|+|++.||..|+++|++|++|++.. .... +. +.+...
T Consensus 177 -~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~--------------------------~~---~~~~~~ 226 (434)
T 2gp6_A 177 -KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRI--------------------------EA---VPIAGF 226 (434)
T ss_dssp -CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCC--------------------------CH---HHHHHH
T ss_pred -CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeecccc--------------------------CH---HHHHHH
Confidence 47999999999999999999999999999999811 1000 00 011110
Q ss_pred HHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCee
Q 013344 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 204 s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaA 283 (445)
++.+ + .... +.+ .++.. .+| |+. ..+...++||+++
T Consensus 227 ~~~~------~-~ls~------------~~~-------~p~~~------------~~p-fd~-----~~~g~v~gdGAaa 262 (434)
T 2gp6_A 227 AQMR------I-VMST------------NND-------DPAGA------------CRP-FDR-----DRDGFVFGEGGAL 262 (434)
T ss_dssp HTTT------S-SCCC------------CTT-------CTTTS------------CCS-SBT-----TCCCCCBBCCEEE
T ss_pred HHHH------H-HhcC------------CCC-------CCCCc------------eec-ccc-----cCCCcceecceEE
Confidence 0000 0 0000 000 01111 233 321 2345568999999
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HH-H
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV-Y 353 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~-~ 353 (445)
+||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+++|...+.. +. .
T Consensus 263 vvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~a 342 (434)
T 2gp6_A 263 LLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRA 342 (434)
T ss_dssp EEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHHHHHH
T ss_pred EEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHHHHHH
Confidence 999999999988999999999888764 3444556677899999999999999999999999665543 11 1
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+.+.+| .+++|+++++..+||+.|++|+.++++++.+|+++.
T Consensus 343 l~~~fg--~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ 384 (434)
T 2gp6_A 343 INNALG--GNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQV 384 (434)
T ss_dssp HHHHHT--TCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSC
T ss_pred HHHHhc--cCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCc
Confidence 222233 337999999999999999999999999999999753
No 43
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.93 E-value=9e-25 Score=216.33 Aligned_cols=258 Identities=20% Similarity=0.199 Sum_probs=182.5
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~ 130 (445)
+.||. .+|++.+|+. +..++ +.+|+.+|+++||+++|++|++||.|+++++++++. .+..+..++..+|++. ++
T Consensus 32 ~~~i~--~~~Gi~~R~~-a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~-~~ 105 (321)
T 3il6_A 32 AAWIH--SRTGISERRI-VTQEN-TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFN-MPSVACQVQGAIGATE-AF 105 (321)
T ss_dssp HHHHH--HHHSCSEEEC-CSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCTT-CE
T ss_pred hhhhh--hhcCceEEEE-CCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcC-CCcHHHHHHHHcCCCC-ce
Confidence 34554 6889987654 33445 999999999999999999999999999999988775 5667888999999974 99
Q ss_pred eEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013344 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210 (445)
Q Consensus 131 ~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~ 210 (445)
+++++.+|+|+++||..|+++|++|.++++..
T Consensus 106 ~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv------------------------------------------------ 137 (321)
T 3il6_A 106 AFDISAACSGFVYALSMAEKLVLSGRYQTGLV------------------------------------------------ 137 (321)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTSSCCCEEE------------------------------------------------
T ss_pred EEEeCcccHHHHHHHHHHHHHHHCCCCCEEEE------------------------------------------------
Confidence 99999999999999999999999998877611
Q ss_pred HHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHH
Q 013344 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 290 (445)
Q Consensus 211 a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~ 290 (445)
+..|.. ...+++.. ...+..++|||+|+||.+.+
T Consensus 138 ------------------------------vg~e~~-------------s~~~~~~d---r~~~~lfGDGA~A~vl~~~~ 171 (321)
T 3il6_A 138 ------------------------------IGGETF-------------SKMLDWTD---RSTAVLFGDGAAGVLIEAAE 171 (321)
T ss_dssp ------------------------------EEEECG-------------GGGSCTTC---TTTGGGBCCEEEEEEEEEES
T ss_pred ------------------------------EEEccc-------------cccCCccc---cccceeeccccEEEEEEEcC
Confidence 000000 00000000 01123479999999998754
Q ss_pred HHHhcCCCeeEEEEEe-EE----eecC------CC---------CCCc-c---H---HHHHHHHHHHcCCCCCCccEEEe
Q 013344 291 VAMRKGLPILGVFRTF-AA----VGVD------PA---------IMGV-G---P---AVAIPAAVKSAGLQLDDIDLFEI 343 (445)
Q Consensus 291 ~a~~~g~~~~~~i~~~-~~----~~~~------p~---------~~~~-~---~---~~ai~~aL~~aGl~~~DID~~e~ 343 (445)
. ..++...... +. ...+ |. .+.. + + ...+++++++. +.++|||+|.+
T Consensus 172 ~-----~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~did~~v~ 245 (321)
T 3il6_A 172 T-----PHFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDETVDYLLL 245 (321)
T ss_dssp S-----CCEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGGGCSEEEE
T ss_pred C-----CCEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCcccCCEEEE
Confidence 2 1122211111 00 0000 00 0100 1 1 12333334332 33899999999
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--eEEEe--ecccceeEEEE
Q 013344 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--VISMC--IGTGMGAAAVF 419 (445)
Q Consensus 344 h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--~~~~~--~G~G~~~a~~l 419 (445)
||++..+...+.+.||++++++..+. +.+||||+++++.+|+++.+++.. +.| +.+++ +|+|++|+.++
T Consensus 246 Hq~~~~i~~~~~~~lgl~~ek~~~~l------~~~GNt~sasi~~~L~~~~~~g~~-~~G~~d~vll~~fG~G~t~~~~~ 318 (321)
T 3il6_A 246 HQANVRIIDKIARKTKISREKFLTNM------DKYGNTSAASIPILLDEAVENGTL-ILGSQQRVVLTGFGGGLTWGSLL 318 (321)
T ss_dssp CCSCHHHHHHHHHHHTCCGGGBCCCG------GGTCBCGGGHHHHHHHHHHHTTSS-CTTSCCEEEEEEEETTTEEEEEE
T ss_pred cCCCHHHHHHHHHHcCcCHHHhhhhH------hhcccHHHHHHHHHHHHHHHhCCC-CCCCCCEEEEEEEehhheeEEEE
Confidence 99999999999999999999998766 899999999999999999887765 667 54333 99999998887
Q ss_pred EE
Q 013344 420 ER 421 (445)
Q Consensus 420 ~~ 421 (445)
++
T Consensus 319 l~ 320 (321)
T 3il6_A 319 LT 320 (321)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 44
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.93 E-value=6.8e-24 Score=217.26 Aligned_cols=242 Identities=17% Similarity=0.177 Sum_probs=172.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~lG 124 (445)
...+|+.+++++||+++|+++++|| .|++|+..+++. ....++..++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 4578999999999999999999999 799998755431 01346777888999
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 204 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s 204 (445)
+. .|+++|+++|+|++.||..|+++|++| +|++..... + .-+++..+..+..
T Consensus 158 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~--------e---------------~~~~~~~~~~~~~-- 209 (415)
T 1tqy_B 158 MR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGV--------D---------------SALDPWGWVSQIA-- 209 (415)
T ss_dssp CC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEE--------E---------------CCCSHHHHHHHHT--
T ss_pred CC--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeee--------c---------------CcCCHHHHHHHHh--
Confidence 94 699999999999999999999999999 999811000 0 0000000000000
Q ss_pred HHHHHHHHHcCCcccccccceecccCCCCCCCCCeeec----cCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCC
Q 013344 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTIS----VDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDG 280 (445)
Q Consensus 205 ~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~----~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DG 280 (445)
.+ .++ +++. .+| |+. ..+.+.++||
T Consensus 210 ---------~~------------------------~ls~~~~~~~~------------~~p-fd~-----~~~G~~~geG 238 (415)
T 1tqy_B 210 ---------SG------------------------RISTATDPDRA------------YLP-FDE-----RAAGYVPGEG 238 (415)
T ss_dssp ---------TS------------------------CBCCCSCGGGS------------CCT-TST-----TCCCBCBBCE
T ss_pred ---------cc------------------------CccCCCCCCCC------------cCC-CCC-----CCCCcceeee
Confidence 00 111 1111 233 332 2356678999
Q ss_pred CeeEEeeCHHHHHhcCC-CeeEEEEEeEEeecCCCCCCc--cHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHH
Q 013344 281 AGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVDPAIMGV--GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVY 353 (445)
Q Consensus 281 AaAvvL~s~~~a~~~g~-~~~~~i~~~~~~~~~p~~~~~--~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~ 353 (445)
++++||++.+.|++.+. ++++++.+++........... ++..+++++|+++|++++||||+++|.+++.. +..
T Consensus 239 aaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~ 318 (415)
T 1tqy_B 239 GAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEAR 318 (415)
T ss_dssp EEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHH
T ss_pred EEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHH
Confidence 99999999999999999 999999998876432211111 77899999999999999999999999999853 333
Q ss_pred HHHH-cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 354 CRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 354 ~~e~-LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.++. +|-. ++..+..+..+||+.|++|+++++.++.+|+++
T Consensus 319 al~~~~g~~--~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~ 360 (415)
T 1tqy_B 319 AIGRVFGRE--GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREG 360 (415)
T ss_dssp HHHHHHCTT--CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCC--CceEeccchhhccChHHHHHHHHHHHHHHHhcC
Confidence 3333 3432 244444444579999999999999999999874
No 45
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.93 E-value=2.2e-24 Score=221.95 Aligned_cols=250 Identities=16% Similarity=0.214 Sum_probs=178.7
Q ss_pred CHHHHHHHHHHHHHHHcCC-CCCCCC----cEEEEeccCCCc-----------c--------------cchHHHHHHHHc
Q 013344 74 YPDDLLAPVLKAVIEKTNV-DPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYA 123 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi-~~~dId----~vi~g~~~~~~~-----------~--------------~~~~a~~~~~~l 123 (445)
...+|+.+|+++||+++|+ ++++|| .|++|+..++.. . ...++..++..+
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 3568999999999999999 999888 599998765310 0 013567788899
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecC--ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHH
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVN--PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 201 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~--~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a 201 (445)
|+. .|+++|+++|+|++.||..|+++|++|++|++... .... +...+..+.
T Consensus 167 gl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~-------------------------~~~~~~~~~ 219 (431)
T 2ix4_A 167 GFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSI-------------------------DALSVAGFS 219 (431)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC-------------------------SHHHHHHHH
T ss_pred CCC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeecccc-------------------------CHHHHHHHH
Confidence 994 69999999999999999999999999999998110 0000 000000000
Q ss_pred HHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCC
Q 013344 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 281 (445)
Q Consensus 202 ~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGA 281 (445)
. .+.+ ... ...+.+. ..+| |+. ..+++.++|||
T Consensus 220 ~-----------~~~l------------------------s~~----~~~~~~~--~~~p-fd~-----~~~g~~~gdGA 252 (431)
T 2ix4_A 220 R-----------SRAL------------------------STK----FNSSPQE--ASRP-FDC-----DRDGFVIGEGS 252 (431)
T ss_dssp H-----------TTCB------------------------CCT----TTTCGGG--SCCT-TBT-----TCCSBCBBCEE
T ss_pred h-----------cccc------------------------Ccc----ccCCccc--cccc-CCC-----CCCCceeecce
Confidence 0 0110 000 0001111 1233 321 23455699999
Q ss_pred eeEEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HH
Q 013344 282 GAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV 352 (445)
Q Consensus 282 aAvvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~ 352 (445)
+++||++.+.|++.+.++++++.+++... ..|...+.++..+++++|+++|++++||||+++|.+++.. +.
T Consensus 253 aavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~~D~~E~ 332 (431)
T 2ix4_A 253 GVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEA 332 (431)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHH
T ss_pred EEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHH
Confidence 99999999999999999999999888765 3455566778899999999999999999999999998764 22
Q ss_pred -HHHHHcCCC--CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 353 -YCRNKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 353 -~~~e~LGl~--~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
.+.+.++.. ..+++.++++..+||+.|++|+.++++++.+|+++.
T Consensus 333 ~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ 380 (431)
T 2ix4_A 333 RAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGV 380 (431)
T ss_dssp HHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCC
Confidence 222333322 256778888889999999999999999999999753
No 46
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.93 E-value=1.2e-24 Score=223.53 Aligned_cols=248 Identities=19% Similarity=0.262 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-------------c-----------cchH---HH----HH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------Q-----------RASE---CR----MA 119 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-------------~-----------~~~~---a~----~~ 119 (445)
..+|+.+++++||+++|+++++|| .|++|+..+++. . ...+ +. .+
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 468999999999999999999999 599998766431 0 0112 23 67
Q ss_pred HHHcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHH
Q 013344 120 AFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 198 (445)
Q Consensus 120 ~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d 198 (445)
+..+|+. .|+++|+++|+|++.||..|+++|++|++|++.... ... +++..+.
T Consensus 153 a~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~------------------------~~~~~~~ 206 (424)
T 1tqy_A 153 AWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP------------------------ITPIVVA 206 (424)
T ss_dssp HHHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC------------------------CSHHHHH
T ss_pred HHhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeeccc------------------------CCHHHHH
Confidence 7789994 699999999999999999999999999999981100 000 0000000
Q ss_pred HHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCC
Q 013344 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVS 278 (445)
Q Consensus 199 ~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~ 278 (445)
.+. ..+.+.. + ..++|.. .+| |+. ..++..++
T Consensus 207 ~~~-----------~~~~ls~------------~-------~~~p~~~------------~rp-fd~-----~~~G~v~g 238 (424)
T 1tqy_A 207 CFD-----------AIRATTA------------R-------NDDPEHA------------SRP-FDG-----TRDGFVLA 238 (424)
T ss_dssp HHH-----------HTTCBCC------------C-------CSCGGGC------------CCT-TBT-----TCCCBCEE
T ss_pred HHH-----------hhccccC------------C-------CCCCCCC------------ccC-CCC-----CCCceeee
Confidence 000 0011100 0 0011111 333 332 23455689
Q ss_pred CCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH---
Q 013344 279 DGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ--- 350 (445)
Q Consensus 279 DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~--- 350 (445)
||++++||++.+.|++.+.++++++.+++..... |...+.+...+++++|+++|++++||||+|+|++++..
T Consensus 239 eGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~ 318 (424)
T 1tqy_A 239 EGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDR 318 (424)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHH
T ss_pred cceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCH
Confidence 9999999999999999999999999988876432 44455667899999999999999999999999999874
Q ss_pred -HH-HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 351 -FV-YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 351 -~~-~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+. .+.+.++....+++.++.+..+||+.|++|+.++++++.+|+++
T Consensus 319 ~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~ 366 (424)
T 1tqy_A 319 HETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHG 366 (424)
T ss_dssp HHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcC
Confidence 22 33444555555666666666689999999999999999999875
No 47
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.92 E-value=9.1e-24 Score=216.30 Aligned_cols=242 Identities=21% Similarity=0.233 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCcc-------------------------cchHHHHHHHHcCC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ-------------------------RASECRMAAFYAGF 125 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~~-------------------------~~~~a~~~~~~lGl 125 (445)
..+|+.+|+++||+++|+ +++|. |++|+..+++.. ....+..++..+|+
T Consensus 83 ~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 160 (416)
T 2wge_A 83 VQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA 160 (416)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc
Confidence 457999999999999998 56664 999988765410 01245667778999
Q ss_pred CCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEe---cCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGS---VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 126 ~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~---~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
+.|+++++++|+|+++||..|+++|++|++|++. ...... + ..+..
T Consensus 161 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~----------~-------------------~~~~~ 209 (416)
T 2wge_A 161 --RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIE----------A-------------------LPIAA 209 (416)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCC----------H-------------------HHHHH
T ss_pred --CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccc----------h-------------------HHHHH
Confidence 4799999999999999999999999999999981 110000 0 00000
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
+. ..+.+ ... +.+.+. ..+| |+. ..++..++||++
T Consensus 210 --~~------~~~~l------------------------~~~-----~~~~~~--~~~p-fd~-----~~dg~v~geGaa 244 (416)
T 2wge_A 210 --FS------MMRAM------------------------STR-----NDEPER--ASRP-FDK-----DRDGFVFGEAGA 244 (416)
T ss_dssp --HH------TTTCB------------------------CCC-----TTSGGG--SCCT-TBT-----TCCCBCBBCEEE
T ss_pred --HH------hcchh------------------------hcc-----ccCCcc--cccc-ccc-----CCCCccccCceE
Confidence 00 00000 000 000011 1233 332 235566899999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEee-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHH
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVY 353 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~-----~~p~~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~ 353 (445)
++||++.+.|++.+.++++++.+++... ..|..++.++..+++++|+++|++++||||||+|++++.. +..
T Consensus 245 avvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~gD~~E~~ 324 (416)
T 2wge_A 245 LMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEAN 324 (416)
T ss_dssp EEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHH
T ss_pred EEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCCCHHHHH
Confidence 9999999999999999999999887764 3455667788899999999999999999999999998875 455
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.++.++. .+++.+..+..+||++|++|+.++++++.+|+++
T Consensus 325 al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~ 365 (416)
T 2wge_A 325 AIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDG 365 (416)
T ss_dssp HHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcC
Confidence 5566643 3677788888999999999999999999999874
No 48
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.92 E-value=8.5e-24 Score=218.71 Aligned_cols=248 Identities=16% Similarity=0.200 Sum_probs=175.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCC-C----cEEEEeccCCCc-------------------------ccchHHHHHHHHc
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEV-G----DIVVGTVLAPGS-------------------------QRASECRMAAFYA 123 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dI-d----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~l 123 (445)
+..+|+.+|+++||+++|+++++| | .|++|+...... .....+..++..+
T Consensus 101 ~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 180 (451)
T 4ddo_A 101 RFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH 180 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence 356799999999999999999999 7 688887643210 0123456677899
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
|+ +.|+++|+++|+|+++||..|+++|++|++|++.... .. . .+...+..+..
T Consensus 181 gl--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~---------~---------------~~~~~~~~~~~ 234 (451)
T 4ddo_A 181 RF--RGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEA---------A---------------FDKVSLGGFAA 234 (451)
T ss_dssp TC--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEC---------C---------------CSHHHHHHHHH
T ss_pred cC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEecccc---------c---------------cCHHHHHHHHH
Confidence 99 4699999999999999999999999999999981100 00 0 00000011110
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
.+.+ +.+ .+.+.....+| |+. ..+++.++|||+
T Consensus 235 -----------~~~l------------------------s~~------~~~~~~~~~~p-fd~-----~~~g~v~gdGAa 267 (451)
T 4ddo_A 235 -----------ARAL------------------------STG------FSEEPVRASRP-FDR-----DRDGFVMGEGAA 267 (451)
T ss_dssp -----------TTCB------------------------CCS------CTTSGGGSCCT-TBT-----TCCSBCBBCEEE
T ss_pred -----------Hhhh------------------------ccC------CCcCccccccc-ccc-----CCCCcEEeceEE
Confidence 0000 000 00111112344 332 234556899999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCC------CccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----H
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM------GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----V 352 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~------~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~ 352 (445)
++||++.+.|++++.++++++.+++... ++..+ +.+...+++++|+++|++++||||+++|.+++... .
T Consensus 268 avvL~~~~~A~~~g~~i~a~i~g~~~~~-d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~ 346 (451)
T 4ddo_A 268 MVVVESLDHALARGARPIAEIIGYGTTA-DAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEI 346 (451)
T ss_dssp EEEEEEHHHHHHTTCCCSEEEEEEEEEE-CCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHH
T ss_pred EEEEeeHHHHHhCCCceEEEEEEEEEec-CCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHH
Confidence 9999999999999999999999988765 33322 23457899999999999999999999999998742 2
Q ss_pred -HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 353 -YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 353 -~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.+.++. ..+++.++.+..+||++|++|+++++.++.+|+++
T Consensus 347 ~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~ 390 (451)
T 4ddo_A 347 EALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDG 390 (451)
T ss_dssp HHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcC
Confidence 23334555 44667777778899999999999999999999875
No 49
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.92 E-value=1e-23 Score=216.72 Aligned_cols=245 Identities=16% Similarity=0.163 Sum_probs=177.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHcC
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~lG 124 (445)
+..+|+.+|+++||+++|+++++|| .|++|+..+++. ....++..++..+|
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 170 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFK 170 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcC
Confidence 3568999999999999999999998 688988755421 01235677888999
Q ss_pred CCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc--cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHH
Q 013344 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP--KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202 (445)
Q Consensus 125 l~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~--~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~ 202 (445)
+ +.|+++|+++|+|+++||..|+++|++|++|++...- .+.. ...-.+
T Consensus 171 l--~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~--------------------------~~~~~~-- 220 (428)
T 3mqd_A 171 I--KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDW--------------------------TLSVLF-- 220 (428)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--------------------------HHHHHH--
T ss_pred C--CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccch--------------------------HHHHHH--
Confidence 9 4799999999999999999999999999999981100 0000 000000
Q ss_pred HHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCe
Q 013344 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAG 282 (445)
Q Consensus 203 ~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAa 282 (445)
. ..+. +..+... + .-...+| |+. ..+...++|||+
T Consensus 221 ---~------~~~~------------------------ls~~~~~----~--p~~~~rp-fd~-----~~~G~v~gEGAa 255 (428)
T 3mqd_A 221 ---D------AMGA------------------------MSSKYND----T--PSTASRA-YDK-----NRDGFVIAGGAG 255 (428)
T ss_dssp ---H------HTTC------------------------BCCTTTT----S--GGGSCCT-TBT-----TCCSBCBBCEEE
T ss_pred ---H------Hhhh------------------------hcccccC----C--cccccCc-ccC-----CCCCcccccceE
Confidence 0 0000 0000000 0 0011344 332 234445899999
Q ss_pred eEEeeCHHHHHhcCCCeeEEEEEeEEeecCCC---CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HHH
Q 013344 283 AVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VYC 354 (445)
Q Consensus 283 AvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~---~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~~ 354 (445)
++||++.+.|++.+.++++++.+++....... .++.++..+++++|+ |++ +||||+|.|.+++... ..+
T Consensus 256 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~~D~~E~~al 332 (428)
T 3mqd_A 256 VLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKIDYINPHATSTPAGDAPEIEAI 332 (428)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCHHHHHHHHHHH
T ss_pred EEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCCCcCHHHHHHH
Confidence 99999999999999999999999988762221 256778899999999 999 9999999999988642 234
Q ss_pred HHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 355 ~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
.+.++...+.++.+..+..+||+.|++|+++++.++.+|+++
T Consensus 333 ~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~ 374 (428)
T 3mqd_A 333 RQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNN 374 (428)
T ss_dssp HHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhC
Confidence 455675555577778888899999999999999999999864
No 50
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=99.92 E-value=2.5e-24 Score=218.72 Aligned_cols=247 Identities=16% Similarity=0.158 Sum_probs=175.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~I 152 (445)
+..+|+.+|+++||+++|+++++||.|+++++++ .. .+..+..++..||++..++ +++++.+|+|+++||..|..+|
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i 178 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-ID-MPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLA 178 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CC-BSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CC-CCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999988 43 5677888888999975454 8999999999999999999999
Q ss_pred HcCCCCeEe-----cCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 153 KAGFYDIGS-----VNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 153 ~sG~~~~v~-----~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
++|.++++. ..+ .+.++.
T Consensus 179 ~sg~~~~vLvvg~E~~s~~~~~~~-------------------------------------------------------- 202 (393)
T 3ov2_A 179 ENNRGARVLVVACEITVLSFRGPN-------------------------------------------------------- 202 (393)
T ss_dssp HHSTTCEEEEEEEECGGGTCCCCC--------------------------------------------------------
T ss_pred HcCCCCEEEEEEEeccchhccCCc--------------------------------------------------------
Confidence 999988771 110 110000
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
+ -+.+.+ ..+..++|||+|+||...+.. .. ..+.-++...
T Consensus 203 ------------------d-----~~~~~~---------------~~~~lFGDGAaA~vl~~~~~~-~~-~~~~~~~~~~ 242 (393)
T 3ov2_A 203 ------------------E-----GDFEAL---------------AGQAGFGDGAGAVVVGADPLE-GI-EKPIYEIAAA 242 (393)
T ss_dssp ------------------T-----TCHHHH---------------HHHHHBCCEEEEEEEESSCCT-TT-CCCSEEEEEE
T ss_pred ------------------c-----cchhhh---------------cccccccCccEEEEEEecCCC-cc-cCceeEEEec
Confidence 0 000100 112237899999999865421 10 1111223322
Q ss_pred EEeecCCCC---------------CCc--------cHHHHHHHHHHHcCCCC-CCccEEEecCCChHHHHHHHHHcCCCC
Q 013344 307 AAVGVDPAI---------------MGV--------GPAVAIPAAVKSAGLQL-DDIDLFEINEAFASQFVYCRNKLGLDP 362 (445)
Q Consensus 307 ~~~~~~p~~---------------~~~--------~~~~ai~~aL~~aGl~~-~DID~~e~h~~~~~~~~~~~e~LGl~~ 362 (445)
+....+... |+. ....+++++|+++|+++ +|| +|.+||++..+...+.++||+++
T Consensus 243 ~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~n~~i~~~v~~~Lgl~~ 321 (393)
T 3ov2_A 243 MQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPGNWAIIDAIEAKLQLSP 321 (393)
T ss_dssp EEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCCCHHHHHHHHHHHTCCT
T ss_pred CcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCCChHHHHHHHHHcCCCH
Confidence 211111100 111 11368999999999997 888 99999999999999999999999
Q ss_pred CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc----CCCCcee---e-EEEe-ecccceeEEEEEEcc
Q 013344 363 EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR----GRDCRFG---V-ISMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 363 ~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~----~~~~~~G---~-~~~~-~G~G~~~a~~l~~~~ 423 (445)
+++..+.-. .+.+|||++++++.+|+++.++ +.. +.| . ++++ +|+|++|+++++++-
T Consensus 322 ek~~~s~~~---l~~~GNtssAsip~~L~~~~~~~~~~g~~-~~G~~~d~vll~~fG~G~t~~~~ll~~~ 387 (393)
T 3ov2_A 322 DKLSTARHV---FTEYGNMQSATVYFVMDELRKRSAVEGRS-TTGDGLQWGVLLGFGPGLSIETVVLRSM 387 (393)
T ss_dssp TTTHHHHHH---HHHHCBCGGGHHHHHHHHHHHHHHHTTCS-BTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHH---HHHhCChHHhHHHHHHHHHHHhhhhcCCc-CCCCCCCeEEEEEECccceeeeeeeEEc
Confidence 998765111 1789999999999999998864 443 555 3 3333 999999988888764
No 51
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=99.92 E-value=1.3e-24 Score=220.50 Aligned_cols=243 Identities=16% Similarity=0.105 Sum_probs=167.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~I 152 (445)
+..+|+.+|+++||+++|++++|||.|+++++++ .. .+..+..++..||++..++ +++++.+|+|+++||..|..+|
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i 172 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AH-VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLA 172 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CE-ESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CC-cccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999988 43 5667888888999975453 8999999999999999999999
Q ss_pred HcCCCCeEe-----cCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 153 KAGFYDIGS-----VNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 153 ~sG~~~~v~-----~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
++|.++++. ..+ .+.++
T Consensus 173 ~sg~~~~vLvvg~E~~s~~~~~~--------------------------------------------------------- 195 (387)
T 3oit_A 173 ENSRGARVLVVAAELTLMYFTGP--------------------------------------------------------- 195 (387)
T ss_dssp HSSTTCEEEEEEEECGGGTCCCC---------------------------------------------------------
T ss_pred hcCCCCEEEEEEEeccchhccCc---------------------------------------------------------
Confidence 999988771 110 00000
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
++ -+.+. ...+..++|||+|+||...+. . ...+..++.+.
T Consensus 196 -----------------~d-----~~~~~---------------~~~~~lFGDGAaA~vl~~~~~--~-~~~~~~~~~~~ 235 (387)
T 3oit_A 196 -----------------DE-----GCFRT---------------LLVQGLFGDGAAAVIVGADAD--D-VERPLFEIVSA 235 (387)
T ss_dssp -----------------CS-----SSCHH---------------HHHHHHBCCEEEEEEEESSCC--S-SCCCCEEEEEE
T ss_pred -----------------cc-----cchHh---------------hhcccccccceEEEEEecCCC--c-ccCCceEEEec
Confidence 00 00000 011233799999999987541 1 11122244433
Q ss_pred EEeecCCCC---------------CCc--------cHHHHHHHHHHHc----CCCCCCcc--EEEecCCChHHHHHHHHH
Q 013344 307 AAVGVDPAI---------------MGV--------GPAVAIPAAVKSA----GLQLDDID--LFEINEAFASQFVYCRNK 357 (445)
Q Consensus 307 ~~~~~~p~~---------------~~~--------~~~~ai~~aL~~a----Gl~~~DID--~~e~h~~~~~~~~~~~e~ 357 (445)
.....+... +.. ....+++++|+++ |++ |+| +|.+||++..+...+.++
T Consensus 236 ~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~Hq~n~~il~~v~~~ 313 (387)
T 3oit_A 236 AQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVHPGSSTIMDQVDAA 313 (387)
T ss_dssp EEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEEEECCCCHHHHHHHHHH
T ss_pred ccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEEEECCCCHHHHHHHHHH
Confidence 322111100 000 1135778888898 988 666 999999999999999999
Q ss_pred cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee------e-EEEe-ecccceeEEEEEEc
Q 013344 358 LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG------V-ISMC-IGTGMGAAAVFERG 422 (445)
Q Consensus 358 LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G------~-~~~~-~G~G~~~a~~l~~~ 422 (445)
||++++++..+--.+ +.+|||++++++.+|++++++. . +.| . .+++ +|+|++|++++++.
T Consensus 314 Lgl~~ek~~~s~~~l---~~~GNtssAsip~~L~~~~~~~-~-~~G~~g~~~d~vll~~fG~G~t~~~~ll~~ 381 (387)
T 3oit_A 314 LGLEPGKLAASRRVL---SDYGNMSGATVIFALDELRRQR-K-EAAAAGEWPELGVMMAFGPGMTVDAMLLHA 381 (387)
T ss_dssp HTCCTTTTHHHHHHH---HHHCBCGGGHHHHHHHHHHHC------------CCEEEEEEEETTTEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHH---HHhCchHHhHHHHHHHHHHHhh-h-ccCCCCCCCCEEEEEEecccceeeeeeeEe
Confidence 999999987651111 7899999999999999987652 2 444 2 3333 99999998877765
No 52
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.92 E-value=2.1e-23 Score=213.35 Aligned_cols=246 Identities=14% Similarity=0.138 Sum_probs=172.7
Q ss_pred CHHHHHHHHHHHHHHHcCC-CCCCCC----cEEEEeccCCCc-------------------------ccchHHHHHHHHc
Q 013344 74 YPDDLLAPVLKAVIEKTNV-DPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYA 123 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi-~~~dId----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~l 123 (445)
...+|+.+|+++||+++|+ ++++|| .+++|+...... ....++..++..+
T Consensus 76 ~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (412)
T 4ewg_A 76 RVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFW 155 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHh
Confidence 3567999999999999999 888888 888887653210 0124567788899
Q ss_pred CCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHH
Q 013344 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203 (445)
Q Consensus 124 Gl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~ 203 (445)
|+ +.|+++|+++|+|+++||..|+++|++|++|++..... +. +++.....
T Consensus 156 gl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~--------e~----------------~s~~~~~~---- 205 (412)
T 4ewg_A 156 DL--KGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGA--------EE----------------LSGPAVAV---- 205 (412)
T ss_dssp TC--CSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE--------EC----------------CCHHHHHH----
T ss_pred CC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecc--------cc----------------CCHHHHHH----
Confidence 99 46999999999999999999999999999999811000 00 00000000
Q ss_pred HHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCee
Q 013344 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283 (445)
Q Consensus 204 s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaA 283 (445)
+.+ .+.+.. ...+++. ..+| |+. ..++..++|||++
T Consensus 206 -~~~------~~~l~~-------------------~~~~p~~------------~~rp-fd~-----~~~G~~~geGAaa 241 (412)
T 4ewg_A 206 -FDT------LYATST-------------------RNDEPHL------------TPRP-FDA-----KRDGLVVGEGAAT 241 (412)
T ss_dssp -HHT------TTCBCC-------------------CTTCGGG------------CCCT-TBT-----TCCCBCBBCEEEE
T ss_pred -HHH------hhcccc-------------------CCCCCCC------------CCCC-CCC-----CCCCCceECeEEE
Confidence 000 000000 0000111 1333 332 2355668999999
Q ss_pred EEeeCHHHHHhcCCCeeEEEEEeEEeecCCC---CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH----HHHH-
Q 013344 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF----VYCR- 355 (445)
Q Consensus 284 vvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~---~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~----~~~~- 355 (445)
+||++.+.|++.+.++++++.+++....... ..+.++..+++++|+++|++++||||+|+|..++... ...+
T Consensus 242 vvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~ 321 (412)
T 4ewg_A 242 LVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATA 321 (412)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHH
T ss_pred EEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHH
Confidence 9999999999999999999999887653211 1345677999999999999999999999999988743 2222
Q ss_pred HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 356 e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+.++ ++++.+..+..+||+.|++|+++++.++.+|+++
T Consensus 322 ~~~~---~~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~ 359 (412)
T 4ewg_A 322 RTFG---ERMPISSLKSYVGHTLGACGALEAWWTIEMMKRN 359 (412)
T ss_dssp HHHC---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHcC---CCCeeeCccccccccHHHHHHHHHHHHHHHHhcC
Confidence 3333 2355555566679999999999999999999874
No 53
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=99.91 E-value=4.6e-24 Score=215.85 Aligned_cols=252 Identities=15% Similarity=0.151 Sum_probs=175.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe-cCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-~~~CsSgl~Al~~A~~~I 152 (445)
+..+|+.+|+++||+++|++|+|||.|++++++ +.. .+..+..++..||++....++++ +.+|+|+++||..|.++|
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t-~~~-~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i 157 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSA-NPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLC 157 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCC-SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecC-CCC-CCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHH
Confidence 457999999999999999999999999999988 443 45677888889999754458999 799999999999999999
Q ss_pred Hc----CCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccc
Q 013344 153 KA----GFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223 (445)
Q Consensus 153 ~s----G~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~p 223 (445)
++ |.++++ +..+.+.+++. +... ..
T Consensus 158 ~a~~~~G~~~~vLvv~~E~~s~~~~~~~--------------------------~~~~---------~~----------- 191 (379)
T 3euo_A 158 LGHTARGKPARILVLALEVSTTMVRSEL--------------------------ESID---------AL----------- 191 (379)
T ss_dssp HHHHHTTCCCEEEEEEEECCGGGHHHHH--------------------------HHHH---------HH-----------
T ss_pred HhccccCCCCEEEEEEEEeehhhhcCcc--------------------------cccc---------cc-----------
Confidence 98 988887 22222221100 0000 00
Q ss_pred ceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEE
Q 013344 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVF 303 (445)
Q Consensus 224 v~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i 303 (445)
.++ ...+..++|||+|+||...+... .......++
T Consensus 192 -------------------~~d-------------------------~~~~~LFGDGAaAvvl~~~~~~~-~~~~~~~~~ 226 (379)
T 3euo_A 192 -------------------QET-------------------------RIGIALFSDCASAVILSNGIGEA-PGKPAIYDL 226 (379)
T ss_dssp -------------------CCC-------------------------CCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEE
T ss_pred -------------------HHH-------------------------hhcceeecCccEEEEEecCCCCc-cccccceee
Confidence 000 01122379999999998754211 011122334
Q ss_pred EEeEEeecCC-----------C---CC-Cc--------cHHHHHHHHHHH-------cCCCCCCccEEEecCCChHHHHH
Q 013344 304 RTFAAVGVDP-----------A---IM-GV--------GPAVAIPAAVKS-------AGLQLDDIDLFEINEAFASQFVY 353 (445)
Q Consensus 304 ~~~~~~~~~p-----------~---~~-~~--------~~~~ai~~aL~~-------aGl~~~DID~~e~h~~~~~~~~~ 353 (445)
+++.....+. . .+ +. ....+++++|++ +|++++|||++ +||++..+...
T Consensus 227 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~~l~~~gl~~~did~~-~Hq~n~~il~~ 305 (379)
T 3euo_A 227 LGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-MHPGGATILSG 305 (379)
T ss_dssp EEEEEEECTTCGGGEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-ECCSSHHHHHH
T ss_pred eceeEEEecCchhhcCceecCCCcEEEeChHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHeeEE-eCCCChHHHHH
Confidence 4332211110 0 00 11 123678888886 58999999977 99999999999
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC--CCCcee----e-EEEe-ecccceeEEEEEEcc
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--RDCRFG----V-ISMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~--~~~~~G----~-~~~~-~G~G~~~a~~l~~~~ 423 (445)
+.++||++++++..+.-.+ +.+|||++++++.+|+++.+++ .. +.| . ++++ +|+|++++++++++.
T Consensus 306 v~~~Lgl~~ek~~~s~~~l---~~~GNtssAsi~~~L~~~~~~g~~~l-~~Gg~~~d~vll~~fG~G~t~~~~ll~~~ 379 (379)
T 3euo_A 306 AESAMGLTPEHMRASYDRY---INHGNSSSATIFSVLNRLREKDMDAL-APGGKVKEYVVGCAFGPGINVEMCMLKRR 379 (379)
T ss_dssp HHHHHTCCGGGGHHHHHHH---HHHCBCGGGHHHHHHHHHTSHHHHTT-CGGGCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHhCCCHHHHHHHHHHH---HhcCccHHHHHHHHHHHHHhhccccc-CCCCCCCCeEEEEEECcccEeEEEEEEeC
Confidence 9999999999986654111 4679999999999999998764 22 333 3 3333 999999999998863
No 54
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=99.91 E-value=1.6e-23 Score=216.28 Aligned_cols=251 Identities=15% Similarity=0.166 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe-cCcCcHHHHHHHHHHHHHHc
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAIKA 154 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-~~~CsSgl~Al~~A~~~I~s 154 (445)
.+|+.+|+++||+++|++|+|||.||+++++ +.. .+..+..++..||++....+++| +.+|+++++||..|.++|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~-~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a 188 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSA-NPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLG 188 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCC-SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCC-CCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Confidence 5999999999999999999999999999988 443 45678888889999754448999 79999999999999999997
Q ss_pred ----CCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce
Q 013344 155 ----GFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225 (445)
Q Consensus 155 ----G~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~ 225 (445)
|.++++ +..+.+.++.. +... .+
T Consensus 189 ~~~~G~~~~vLVvg~E~~S~~~~~~~--------------------------~~~~---------~~------------- 220 (465)
T 3e1h_A 189 HTARGKPARILVLALEVSTTMVRSEL--------------------------ESID---------AL------------- 220 (465)
T ss_dssp HHHTTCCCEEEEEEEECCGGGHHHHH--------------------------HHHH---------HH-------------
T ss_pred ccccCCCCEEEEEEEeecchhcCccc--------------------------cccc---------cc-------------
Confidence 988887 22222221100 0000 00
Q ss_pred ecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEE
Q 013344 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRT 305 (445)
Q Consensus 226 ~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~ 305 (445)
.++ ...+..++|||+|+||...+... .......++.+
T Consensus 221 -----------------~~d-------------------------~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~ 257 (465)
T 3e1h_A 221 -----------------QET-------------------------RIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLG 257 (465)
T ss_dssp -----------------TCC-------------------------CCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEE
T ss_pred -----------------ccc-------------------------cccccccccceeEEEEEccCCCc-cccccceeecc
Confidence 000 01122379999999998753210 00112223443
Q ss_pred eEEeecCCC--C-------------CCc--------cHHHHHHHHHHH-------cCCCCCCccEEEecCCChHHHHHHH
Q 013344 306 FAAVGVDPA--I-------------MGV--------GPAVAIPAAVKS-------AGLQLDDIDLFEINEAFASQFVYCR 355 (445)
Q Consensus 306 ~~~~~~~p~--~-------------~~~--------~~~~ai~~aL~~-------aGl~~~DID~~e~h~~~~~~~~~~~ 355 (445)
+.....+.. . .+. ....+++++|++ +|++++|||+| +||++..+...+.
T Consensus 258 ~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~Hqan~rIl~~v~ 336 (465)
T 3e1h_A 258 WENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-MHPGGATILSGAE 336 (465)
T ss_dssp EEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-ECCSSHHHHHHHH
T ss_pred ceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHceEE-ecCCChHHHHHHH
Confidence 332211110 0 010 123678888887 67999999988 9999999999999
Q ss_pred HHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc--CCCCcee----e-EEEe-ecccceeEEEEEEccc
Q 013344 356 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR--GRDCRFG----V-ISMC-IGTGMGAAAVFERGDC 424 (445)
Q Consensus 356 e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~--~~~~~~G----~-~~~~-~G~G~~~a~~l~~~~~ 424 (445)
++|||+++++..+.-.+ +.+|||++++++.+|+++.++ +.. +.| . ++++ ||+|++|+++++++..
T Consensus 337 ~~Lgl~~ek~~~s~~~l---~~yGNtsSASip~aL~~~~~~~~g~l-~~Gg~~~d~vll~gfG~Glt~~~~llr~~~ 409 (465)
T 3e1h_A 337 SAMGLTPEHMRASYDRY---INHGNSSSATIFSVLNRLREKDMDAL-APGGKVKEYVVGCAFGPGINVEMCMLKRRM 409 (465)
T ss_dssp HHHTCCGGGGHHHHHHH---HHHCBCGGGHHHHHHHHHTSTTTTSC-SSSSCCCSEEEEEEEETTTEEEEEEEEECC
T ss_pred HHhCcCHHHhHHHHHHH---hcceechHhHHHHHHHHHHHhccccc-CCCCCCCCEEEEEEEhHHHhhhheeeEEec
Confidence 99999999986543111 567999999999999999876 332 333 3 3333 9999999999998855
No 55
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=99.91 E-value=5.6e-24 Score=216.76 Aligned_cols=254 Identities=11% Similarity=0.064 Sum_probs=183.0
Q ss_pred EEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCce
Q 013344 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (445)
Q Consensus 52 v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~ 131 (445)
.||. .+|+|.+|+. .+. .+..+|+.+|+++||+++|++++|||.|+++++++.. .+..+..++..+|++.+++.
T Consensus 118 e~i~--~rtgi~~R~~-~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~--~P~~a~~v~~~LGl~~~~~~ 191 (413)
T 3v7i_A 118 KAVP--ASQTVQERTA-PAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPA--LPGLDVALANRLPLRGDTML 191 (413)
T ss_dssp HTSC--CCCCHHHHHH-HHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCC--SSCHHHHHHHHTTCCTTCEE
T ss_pred ccee--cCCCHHHhCc-ccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCC--cCHHHHHHHHHhCCCCCceE
Confidence 3554 6999987642 333 4688999999999999999999999999999998743 46678888899999866889
Q ss_pred EEe-cCcCcHHHHHHHHHHHHHHcCCCCeE-----ecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHH
Q 013344 132 RTV-NRQCSSGLQAVADVAAAIKAGFYDIG-----SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205 (445)
Q Consensus 132 ~~v-~~~CsSgl~Al~~A~~~I~sG~~~~v-----~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~ 205 (445)
+++ +.+|+||++||..|+.+|++|.++++ +..+...++
T Consensus 192 ~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~~~------------------------------------ 235 (413)
T 3v7i_A 192 LPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQP------------------------------------ 235 (413)
T ss_dssp EEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGCCS------------------------------------
T ss_pred EEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccccCc------------------------------------
Confidence 999 99999999999999999999998877 111111000
Q ss_pred HHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEE
Q 013344 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 285 (445)
Q Consensus 206 ~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvv 285 (445)
++ -+.+.+ -.+..++|||+|+|
T Consensus 236 --------------------------------------~d-----~~~~~l---------------v~~~LFGDGAaAvv 257 (413)
T 3v7i_A 236 --------------------------------------AD-----DTLESL---------------IVRLLFADTAVAAV 257 (413)
T ss_dssp --------------------------------------SC-----CSTTHH---------------HHHHHBCCEEEEEE
T ss_pred --------------------------------------cc-----cchhhh---------------hcceeeccccEEEE
Confidence 00 000000 01223799999999
Q ss_pred eeCHHHHHhcCCCeeEEEEEeEEeecCCC--C-------------C-Ccc------HHHHHHHHHH------HcCCCCCC
Q 013344 286 LMKRSVAMRKGLPILGVFRTFAAVGVDPA--I-------------M-GVG------PAVAIPAAVK------SAGLQLDD 337 (445)
Q Consensus 286 L~s~~~a~~~g~~~~~~i~~~~~~~~~p~--~-------------~-~~~------~~~ai~~aL~------~aGl~~~D 337 (445)
|...+.. .+.-++.+......+.. . | +.. ...+++++|+ ++|++
T Consensus 258 l~~~~~~-----~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~~gl~--- 329 (413)
T 3v7i_A 258 VTGRPRP-----ESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDPSSWH--- 329 (413)
T ss_dssp EESSCCT-----TEEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSCTTCC---
T ss_pred EEecCCC-----CCCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhccccccCCCc---
Confidence 9875421 11112222221111100 0 0 000 2367889999 89997
Q ss_pred ccEEEecCCChHHHHHHHHHcC--CCCCCc---CCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEE-Ee-ec
Q 013344 338 IDLFEINEAFASQFVYCRNKLG--LDPEKI---NVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS-MC-IG 410 (445)
Q Consensus 338 ID~~e~h~~~~~~~~~~~e~LG--l~~~~v---n~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~-~~-~G 410 (445)
||+|.+|+.+..+...+.++|| ++++++ ..+. + +||||+++++.+|+++.+ +.. +.|..+ ++ +|
T Consensus 330 id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l------~-~GNtssAsi~~~L~~~~~-~~~-~~Gd~vll~~fG 400 (413)
T 3v7i_A 330 PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSY------T-SGNRGGAAVFDILRRAHD-AGQ-KTGSRAVLYAAA 400 (413)
T ss_dssp CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHH------T-TCBCGGGHHHHHHHHHHH-HCC-CTTCEEEEEEEE
T ss_pred eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEe------c-eeChHHHHHHHHHHHHHh-CCC-CCCCEEEEEEEC
Confidence 9999999999999999999999 999998 3344 8 999999999999999983 332 555533 33 99
Q ss_pred ccceeEEEEEEc
Q 013344 411 TGMGAAAVFERG 422 (445)
Q Consensus 411 ~G~~~a~~l~~~ 422 (445)
+|+++++++++|
T Consensus 401 ~Glt~~~~ll~w 412 (413)
T 3v7i_A 401 PGLTATALEGEW 412 (413)
T ss_dssp TTTEEEEEEEEE
T ss_pred HHHhHhhhheEe
Confidence 999999998876
No 56
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=99.90 E-value=8.7e-24 Score=215.85 Aligned_cols=246 Identities=17% Similarity=0.100 Sum_probs=175.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~ 151 (445)
++..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..++ +++++.+|+|++.||..|.++
T Consensus 113 ~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 190 (406)
T 2d3m_A 113 PGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVD--MPSADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDL 190 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCE--ESCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCC--CCCHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988732 4567888888999975566 899999999999999999999
Q ss_pred HHcCCCCeEec-----Ccc-chhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce
Q 013344 152 IKAGFYDIGSV-----NPK-VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225 (445)
Q Consensus 152 I~sG~~~~v~~-----~~~-~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~ 225 (445)
|++|.++++.+ .+. +.++
T Consensus 191 i~~g~~~~vLvvg~E~~s~~~~~~-------------------------------------------------------- 214 (406)
T 2d3m_A 191 AENNRGARVLVVCAELTIMMLRAP-------------------------------------------------------- 214 (406)
T ss_dssp HHTSTTCEEEEEEEECGGGTCCCC--------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEEecchheeCC--------------------------------------------------------
Confidence 99999888711 000 0000
Q ss_pred ecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcC-CCeeEEEE
Q 013344 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG-LPILGVFR 304 (445)
Q Consensus 226 ~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g-~~~~~~i~ 304 (445)
++ .+.+. ...+..++|||+|+||.+.+.. + ..+..++.
T Consensus 215 ------------------~d-----~~~~~---------------~~~~~lfGDGAaA~vL~~~~~~---~~~~~~~~l~ 253 (406)
T 2d3m_A 215 ------------------NE-----THLDN---------------AIGISLFGDGAAALIIGSDPII---GVEKPMFEIV 253 (406)
T ss_dssp ------------------CS-----TTHHH---------------HHHHTTBCCEEEEEEEESSCCT---TTCCCCEEEE
T ss_pred ------------------cc-----cchhh---------------hhccceeccceEEEEEecCCCC---ccCCCceEEE
Confidence 00 00000 0112337999999999865421 2 11123444
Q ss_pred EeEEeecCCCC---------------CC--------ccHHHHHHHHHHHcCCCCCCccE----EEecCCChHHHHHHHHH
Q 013344 305 TFAAVGVDPAI---------------MG--------VGPAVAIPAAVKSAGLQLDDIDL----FEINEAFASQFVYCRNK 357 (445)
Q Consensus 305 ~~~~~~~~p~~---------------~~--------~~~~~ai~~aL~~aGl~~~DID~----~e~h~~~~~~~~~~~e~ 357 (445)
+.+....+... ++ .....+++++|+++|++++ ||+ |.+|+++..+...+.+.
T Consensus 254 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~~~~i~~~~~~~ 332 (406)
T 2d3m_A 254 CTKQTVIPNTEDVIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPGGRAILDQVEAK 332 (406)
T ss_dssp EEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCSCHHHHHHHHHH
T ss_pred ecccEEcCCCchhcceeeccCceEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCCCHHHHHHHHHH
Confidence 44332221100 11 1134788999999999999 999 99999999999999999
Q ss_pred cCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--------e-EEEe-ecccceeEEEEEEcc
Q 013344 358 LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--------V-ISMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 358 LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--------~-~~~~-~G~G~~~a~~l~~~~ 423 (445)
||++++++..+-- ..+.+|||++++++.+|+++.+++. +.| . +.++ +|+|++++++++++.
T Consensus 333 lgl~~~k~~~s~~---~l~~~GNt~sAsi~~~L~~~~~~g~--~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~ 403 (406)
T 2d3m_A 333 LKLRPEKFRAART---VLWDYGNMVSASVGYILDEMRRKSA--AKGLETYGEGLEWGVLLGFGPGITVETILLHSL 403 (406)
T ss_dssp TTCCTTTTHHHHH---HHHHHCBCGGGHHHHHHHHHHHHHH--HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCCHHHHHHHHH---HHHHcCCchhhHHHHHHHHHHHhcc--ccCCCccCCCcceEEEEEeccchhhhhHHhhhc
Confidence 9999999875310 1177899999999999998876542 223 3 3333 899999988887763
No 57
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=99.90 E-value=3.6e-23 Score=210.16 Aligned_cols=243 Identities=16% Similarity=0.122 Sum_probs=173.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~ 151 (445)
++..+|+.+|+++||+++|++|++||.|+++++++.. .+..+..++..+|++..++ +++++.+|+|++.||..|.++
T Consensus 100 ~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~ 177 (389)
T 1i88_A 100 VEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD--MPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDL 177 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCC--CchHHHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988743 4567788888999975566 899999999999999999999
Q ss_pred HHcCCCCeEe-----cCcc-chhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce
Q 013344 152 IKAGFYDIGS-----VNPK-VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225 (445)
Q Consensus 152 I~sG~~~~v~-----~~~~-~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~ 225 (445)
|++|.++++. ..+. +.++.
T Consensus 178 i~~g~~~~vLvvg~E~~s~~~~~~~------------------------------------------------------- 202 (389)
T 1i88_A 178 AENNKGARVLVVCSEVTAVTFRGPS------------------------------------------------------- 202 (389)
T ss_dssp HHTSTTCEEEEEEEECGGGTCCCCC-------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEecccHhHcCcc-------------------------------------------------------
Confidence 9999988871 1110 00000
Q ss_pred ecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcC-CCeeEEEE
Q 013344 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG-LPILGVFR 304 (445)
Q Consensus 226 ~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g-~~~~~~i~ 304 (445)
| .+.+. ...+..++|||+|+||.+.+.. + .....++.
T Consensus 203 ------------------d------~~~~~---------------~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~ 240 (389)
T 1i88_A 203 ------------------D------THLDS---------------LVGQALFGDGAAALIVGSDPVP---EIEKPIFEMV 240 (389)
T ss_dssp ------------------T------TCHHH---------------HHHHHHBCCEEEEEEEESSCCT---TTSCCCEEEE
T ss_pred ------------------c------ccccc---------------ccccceEecceEEEEEecCCCC---ccCCCceEEE
Confidence 0 00000 0011227899999999765421 1 11112333
Q ss_pred EeEEeecCCC---------------CCCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCChHHHHHHHHHcCC
Q 013344 305 TFAAVGVDPA---------------IMGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGL 360 (445)
Q Consensus 305 ~~~~~~~~p~---------------~~~~--------~~~~ai~~aL~~aGl~-~~DID~~e~h~~~~~~~~~~~e~LGl 360 (445)
+......+.. .++. ....+++++|+++|++ .+|| +|.+|+++..+...+.+.||+
T Consensus 241 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl 319 (389)
T 1i88_A 241 WTAQTIAPDSEGAIDVHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSI-FWIAHPGGPAILDQVEQKLAL 319 (389)
T ss_dssp EEEEEECTTCTTSEEEEEETTEEEEEECSCHHHHHHHHHHHHHHHHHGGGTCCCTTSS-EEEECCSCHHHHHHHHHHHTC
T ss_pred eeeeEEcCCCcccceeEEecCceEEEeccHHHHHHHHHHHHHHHHHHHhcCCCchhhc-eEEECCCcHHHHHHHHHHcCC
Confidence 2222111110 0111 1236788999999998 8889 999999999999999999999
Q ss_pred CCCCcCCC---CChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--------e-EEEe-ecccceeEEEEEEcc
Q 013344 361 DPEKINVN---GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--------V-ISMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 361 ~~~~vn~~---gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--------~-~~~~-~G~G~~~a~~l~~~~ 423 (445)
+++++..+ . +.+|||++++++.+|+++.+++. +.| . +.++ +|+|++++++++++.
T Consensus 320 ~~ek~~~~~~~l------~~~GNtssAsi~~~L~~~~~~g~--~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~ 387 (389)
T 1i88_A 320 KPEKMNATREVL------SEYGNMSSACVLFILDEMRKKST--QNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387 (389)
T ss_dssp CGGGGHHHHHHH------HHHCBCGGGHHHHHHHHHHHHHH--HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CHHHHHHHHHHH------HHhCCchhhHHHHHHHHHHHhcc--ccCCcccCCCCceEEEEEecCccEEEEEEEEec
Confidence 99988653 4 78999999999999999876653 333 3 3333 999999988888764
No 58
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.90 E-value=3.6e-23 Score=210.92 Aligned_cols=246 Identities=13% Similarity=0.109 Sum_probs=173.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~ 151 (445)
+++.+|+.+|+++||+++|++|++||.|+++++++.. .+..+..++..+|++..++ +++++.+|+|++.||..|.++
T Consensus 113 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 190 (402)
T 3awk_A 113 LEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVD--MPGADFQLAKLLGLRPTVKRVMLYQQGAYAGATVLRVAKDL 190 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCc--CChHHHHHHHHcCCCCccceeeEECCccHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988732 4567888888999975566 899999999999999999999
Q ss_pred HHcCCCCeE-----ecCcc-chhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce
Q 013344 152 IKAGFYDIG-----SVNPK-VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225 (445)
Q Consensus 152 I~sG~~~~v-----~~~~~-~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~ 225 (445)
|++|.++++ +..+. +.++.
T Consensus 191 i~sg~~~~vLvvg~E~~s~~~~~~~------------------------------------------------------- 215 (402)
T 3awk_A 191 AENNKGARVLVACSEVTAVTFRAPS------------------------------------------------------- 215 (402)
T ss_dssp HHTSTTCEEEEEEEECTTTTCCCCC-------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEeccchhhcCCC-------------------------------------------------------
Confidence 999998877 11110 00000
Q ss_pred ecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcC-CCeeEEEE
Q 013344 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG-LPILGVFR 304 (445)
Q Consensus 226 ~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g-~~~~~~i~ 304 (445)
| -+.+. ...+..++|||+|+||.+.+.. + .....++.
T Consensus 216 ------------------d------~~~~~---------------~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~ 253 (402)
T 3awk_A 216 ------------------E------THLDG---------------LVGSALFGDGAAALIVGSDPVP---QEEKPLFEIH 253 (402)
T ss_dssp ------------------T------TCHHH---------------HHHHHHBCCEEEEEEEESSCCT---TTCCCCEEEE
T ss_pred ------------------c------cCHHH---------------hhccccccCceEEEEEecCCCc---cccCCceEEE
Confidence 0 00000 0011237899999999765421 1 11112333
Q ss_pred EeEEeecCCC--C-------------CCcc--------HHHHHHHHHHHcCCC-CCCccEEEecCCChHHHHHHHHHcCC
Q 013344 305 TFAAVGVDPA--I-------------MGVG--------PAVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGL 360 (445)
Q Consensus 305 ~~~~~~~~p~--~-------------~~~~--------~~~ai~~aL~~aGl~-~~DID~~e~h~~~~~~~~~~~e~LGl 360 (445)
+......+.. . ++.. ...+++++|+++|++ .+|| +|.+|+.+..+...+.+.||+
T Consensus 254 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl 332 (402)
T 3awk_A 254 WAGEAVLPDSDGAINGHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFPSYNDM-FWAVHPGGPAILDQIEAKLGL 332 (402)
T ss_dssp EEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHTHHHHHHTTCCCGGGE-EEEECCSCHHHHHHHHHHTTC
T ss_pred eeeEEeeCCCchhcceEEecCceEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCcHHHHHHHHHHcCC
Confidence 3222111110 0 1111 236788999999998 7888 899999999999999999999
Q ss_pred CCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--------e-EEEe-ecccceeEEEEEEcc
Q 013344 361 DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--------V-ISMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 361 ~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--------~-~~~~-~G~G~~~a~~l~~~~ 423 (445)
+++++..+--. -+.+|||++++++.+|+++.+++. +.| + ++++ +|+|+++++++++.-
T Consensus 333 ~~ek~~~s~~~---l~~~GNtssAsi~~~L~~~~~~g~--~~G~~~~g~g~d~vll~~fG~G~t~~~~ll~~~ 400 (402)
T 3awk_A 333 STDKMQASRDV---LASYGNMSSASVLFVLDQIRKNSE--ELHLPTTGEGFEWGFVIGFGPGLTVETLLLRSI 400 (402)
T ss_dssp CTTTTHHHHHH---HHHHCBCGGGHHHHHHHHHHHHHH--HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CHHHHHHHHHH---HHHcCCchhhHHHHHHHHHHhhcc--ccCCCcCCCCcceEEEEEecccceeeeheeeec
Confidence 99998754100 178999999999999999876543 323 3 3333 999999988777653
No 59
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.90 E-value=5e-22 Score=202.82 Aligned_cols=245 Identities=13% Similarity=0.162 Sum_probs=170.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCc-----EEEEeccCCCc------------c--------------cchHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGD-----IVVGTVLAPGS------------Q--------------RASECRMAAFY 122 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~-----vi~g~~~~~~~------------~--------------~~~~a~~~~~~ 122 (445)
...+|+.+++++||+++|+++++||. |++|+..++.. . ...++..++..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 35789999999999999999988886 99998866530 0 12356677778
Q ss_pred cCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHH
Q 013344 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 201 (445)
Q Consensus 123 lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a 201 (445)
+|+ +.|+++|+++|+|++.||..|+++|++|++|++.... ... . ....
T Consensus 150 lgl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~---------~--------------------~~~~ 198 (406)
T 2vba_A 150 FKI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL---------C--------------------WEMA 198 (406)
T ss_dssp TTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC---------C--------------------HHHH
T ss_pred ccC--CCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccc---------c--------------------ChHH
Confidence 999 4799999999999999999999999999999981100 000 0 0000
Q ss_pred HHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCC
Q 013344 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 281 (445)
Q Consensus 202 ~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGA 281 (445)
.. +. ..+.+..+ ++ -+++. ..+| |+. ..+...++||+
T Consensus 199 ~~-~~------~~~~ls~~--------~~----------~~p~~------------~~~p-fd~-----~~~G~v~gEGa 235 (406)
T 2vba_A 199 CE-FD------AMGALSTK--------YN----------DTPEK------------ASRT-YDA-----HRDGFVIAGGG 235 (406)
T ss_dssp HH-HH------HTTCBCCS--------CT----------TSGGG------------SCCT-TBT-----TCCSBCBBCEE
T ss_pred HH-Hh------hccccccc--------cC----------CCCcc------------ccCc-CcC-----CCCceEeeceE
Confidence 00 00 00111000 00 00011 1333 332 23445589999
Q ss_pred eeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCC---CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HH
Q 013344 282 GAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VY 353 (445)
Q Consensus 282 aAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~---~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~ 353 (445)
+++||++.+.|++.+.++++++.+++....... ..+.++..+++++|+++| +||||+|.|++++... ..
T Consensus 236 aavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~dId~ve~HgtgT~~gD~~E~~a 312 (406)
T 2vba_A 236 GMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDVKELAA 312 (406)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---SCCCEEECCCCSCHHHHHHHHHH
T ss_pred EEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---CCccEEEeeCccCcccCHHHHHH
Confidence 999999999999999999999999887653211 115567899999999999 9999999999998752 22
Q ss_pred HHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcC
Q 013344 354 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 397 (445)
Q Consensus 354 ~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~ 397 (445)
+.+.+|... ++.++-+-.+||+.|++|+.+++.++.+|+++.
T Consensus 313 l~~~fg~~~--~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ 354 (406)
T 2vba_A 313 IREVFGDKS--PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGF 354 (406)
T ss_dssp HHHHHTTCC--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHHhCcCC--CceeCchhhhcccHHHHHHHHHHHHHHHHhcCc
Confidence 334455433 333333445899999999999999999999753
No 60
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=99.89 E-value=2e-23 Score=213.44 Aligned_cols=246 Identities=14% Similarity=0.114 Sum_probs=174.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~ 151 (445)
++..+|+.+|+++||+++|++|++||.|+++++++. . .+..+..++..+|++..++ +++++.+|+|++.||..|.++
T Consensus 118 ~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~~-~-~p~~a~~v~~~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~ 195 (413)
T 2p0u_A 118 AQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSGV-N-MPGAELATAKLLGLRPNVRRVMMYQQGAFAGATVLRVAKDL 195 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCC-C-BSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCCc-c-cCcHHHHHHHHhCCCCCcceEeEECCccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998873 2 4567888888999975565 899999999999999999999
Q ss_pred HHcCCCCeE-----ecCcc-chhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce
Q 013344 152 IKAGFYDIG-----SVNPK-VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 225 (445)
Q Consensus 152 I~sG~~~~v-----~~~~~-~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~ 225 (445)
|++|.++++ +..+. +.++
T Consensus 196 i~sg~~~~vLvvg~E~~s~~~~~~-------------------------------------------------------- 219 (413)
T 2p0u_A 196 AENNAGARVLAICSEVTAVTFRAP-------------------------------------------------------- 219 (413)
T ss_dssp HHHSTTCEEEEEEEECSTTTCCCC--------------------------------------------------------
T ss_pred HHhCCCCEEEEEEEhhcchhccCC--------------------------------------------------------
Confidence 999998877 11110 0000
Q ss_pred ecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC-CeeEEEE
Q 013344 226 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFR 304 (445)
Q Consensus 226 ~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~-~~~~~i~ 304 (445)
++ .+.+. ...+..++|||+|+||.+.+.. +. ....++.
T Consensus 220 ------------------~d-----~~~~~---------------~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~ 258 (413)
T 2p0u_A 220 ------------------SE-----THIDG---------------LVGSALFGDGAAAVIVGSDPRP---GIERPIYEMH 258 (413)
T ss_dssp ------------------CT-----TCHHH---------------HHHHHHBCCEEEEEEEESSCCT---TTCCCSEEEE
T ss_pred ------------------Cc-----cChhh---------------hcccceeecccEEEEEecCCCc---cccCCceEEE
Confidence 00 00000 0011237899999999765421 11 1112333
Q ss_pred EeEEeecCCC---------------CCCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCChHHHHHHHHHcCC
Q 013344 305 TFAAVGVDPA---------------IMGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGL 360 (445)
Q Consensus 305 ~~~~~~~~p~---------------~~~~--------~~~~ai~~aL~~aGl~-~~DID~~e~h~~~~~~~~~~~e~LGl 360 (445)
+.+....+.. .++. ....+++++|+++|++ .+|| +|.+|+++..+...+.+.||+
T Consensus 259 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lgl 337 (413)
T 2p0u_A 259 WAGEMVLPESDGAIDGHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNLVGASSWNEL-FWAVHPGGPAILDQVEAKLEL 337 (413)
T ss_dssp EEEEEECTTCTTSSEEEEETTEEEEECCSCHHHHHHHHHHHHHHHHHHHTTCCSGGGS-EEEECCSSHHHHHHHHHHTTC
T ss_pred ecccEEeCCChhhcCceEecCceEEEeccHHHHHHHHHHHHHHHHHHHHcCCCCccce-EEEECCCCHHHHHHHHHHhCC
Confidence 3322211110 0111 1236888999999998 8888 899999999999999999999
Q ss_pred CCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--------e-EEEe-ecccceeEEEEEEcc
Q 013344 361 DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--------V-ISMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 361 ~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--------~-~~~~-~G~G~~~a~~l~~~~ 423 (445)
+++++..+-- ..+.+|||++++++.+|.++.+++. +.| . ++++ +|+|++++++++++.
T Consensus 338 ~~ek~~~s~~---~l~~~GNtssAsi~~~L~~~~~~g~--~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~ 405 (413)
T 2p0u_A 338 EKGKFQASRD---ILSDYGNMSSASVLFVLDRVRERSL--ESNKSTFGEGSEWGFLIGFGPGLTVETLLLRAL 405 (413)
T ss_dssp CGGGGHHHHH---HHHHHCBCGGGHHHHHHHHHHHHHH--HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CHHHHHHHHH---HHHHcCcchhhHHHHHHHHHHHhcc--ccCCcccCCCcceEEEEEeCccceeeeeeEEEe
Confidence 9999865310 0177999999999999999876542 223 3 3333 999999998888874
No 61
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=99.89 E-value=2.7e-23 Score=210.96 Aligned_cols=252 Identities=12% Similarity=0.087 Sum_probs=174.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~ 151 (445)
++..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..++ +++++.+|+|++.||..|.++
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 173 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD--MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDI 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCE--ESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCC--CCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988632 4567888889999975554 899999999999999999999
Q ss_pred HHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCC
Q 013344 152 IKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDP 231 (445)
Q Consensus 152 I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~ 231 (445)
|++|.++++.+
T Consensus 174 i~~g~~~~vLv--------------------------------------------------------------------- 184 (387)
T 3a5r_A 174 AENNKGARVLI--------------------------------------------------------------------- 184 (387)
T ss_dssp HHHSTTCEEEE---------------------------------------------------------------------
T ss_pred HHhCCCCEEEE---------------------------------------------------------------------
Confidence 99999887711
Q ss_pred CCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcC-CCeeEEEEEeEEee
Q 013344 232 KTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG-LPILGVFRTFAAVG 310 (445)
Q Consensus 232 ~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g-~~~~~~i~~~~~~~ 310 (445)
+..|...+ .+ ..| ++. ..-....+..++|||+|+||.+.+.. + ..+..++.+.....
T Consensus 185 ---------vg~e~~s~-~~-------~~~-~d~-~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~ 242 (387)
T 3a5r_A 185 ---------VCSEMTTT-CF-------RGP-SET-HLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTI 242 (387)
T ss_dssp ---------EEEECCTT-TC-------CCC-CSS-CCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEE
T ss_pred ---------EEEeccch-hh-------cCC-Ccc-chhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEE
Confidence 00000000 00 000 000 00001122347999999999865421 2 11112333332221
Q ss_pred cCCC--C-------------CCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCChHHHHHHHHHcCCCCCCcC
Q 013344 311 VDPA--I-------------MGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGLDPEKIN 366 (445)
Q Consensus 311 ~~p~--~-------------~~~--------~~~~ai~~aL~~aGl~-~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn 366 (445)
.+.. . ++. ....+++++|+++|++ ++|| +|.+|+++..+...+.+.||++++++.
T Consensus 243 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~ 321 (387)
T 3a5r_A 243 VPESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAILDQVTAKVGLEKEKLK 321 (387)
T ss_dssp CTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHHTCCGGGGH
T ss_pred eCCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHHHHHHHHHcCCChHHhH
Confidence 1110 0 111 1236788999999998 8899 899999999999999999999999886
Q ss_pred CCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--------eE-EEe-ecccceeEEEEEEcc
Q 013344 367 VNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--------VI-SMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 367 ~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--------~~-~~~-~G~G~~~a~~l~~~~ 423 (445)
.+-- .-+.+|||++++++.+|+++.+++. +.| +. .++ +|+|++++++++++.
T Consensus 322 ~s~~---~l~~~GNtssAsi~~~L~~~~~~g~--~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~ 383 (387)
T 3a5r_A 322 VTRQ---VLKDYGNMSSATVFFIMDEMRKKSL--ENGQATTGEGLEWGVLFGFGPGITVETVVLRSV 383 (387)
T ss_dssp HHHH---HHHHHCBCGGGHHHHHHHHHHHHHH--HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHH---HHHhcCCcchhHHHHHHHHHHHhcc--ccCCCCCCCCcceEEEEEecCcceeeehhheec
Confidence 5310 0177999999999999999876542 223 33 333 899999988887764
No 62
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.89 E-value=8.9e-22 Score=218.89 Aligned_cols=244 Identities=21% Similarity=0.262 Sum_probs=180.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCcc-----------------cchHHHHHHHHcCCCCCCceE
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ-----------------RASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~~-----------------~~~~a~~~~~~lGl~~~~~~~ 132 (445)
+..+|+.+++++||+++|+++++||. |++|+..+++.. ....+..++..+|+ +.|++
T Consensus 94 p~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 171 (915)
T 2qo3_A 94 PQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGL--EGPSI 171 (915)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTB--CSCEE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCC--CCCEE
Confidence 34689999999999999999999995 899988766531 11356677889999 46999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCCeEecC-ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGSVN-PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~-~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a 211 (445)
+|+++|+|++.||.+|+++|++|++|++... ..... .|.. + ..+.
T Consensus 172 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~--------~p~~---------~-------~~~~---------- 217 (915)
T 2qo3_A 172 SVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMA--------TPGV---------F-------VDFS---------- 217 (915)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCS--------STHH---------H-------HHHH----------
T ss_pred EECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhc--------CHHH---------H-------HHHh----------
Confidence 9999999999999999999999999988110 00000 0000 0 0000
Q ss_pred HHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHH
Q 013344 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 291 (445)
Q Consensus 212 ~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~ 291 (445)
..+ .+++|.. .+| |+. ..++..++||++++||.+.+.
T Consensus 218 -~~~------------------------~ls~~g~------------~~~-Fd~-----~adG~v~gEGagavVL~~~~~ 254 (915)
T 2qo3_A 218 -RQR------------------------ALAADGR------------SKA-FGA-----GADGFGFSEGVTLVLLERLSE 254 (915)
T ss_dssp -TTT------------------------CBCSSCC------------CCT-TBT-----TCCCBCBBCEEEEEEEEEHHH
T ss_pred -hhc------------------------ccCCCCC------------ccc-ccC-----CCCceeecCceEEEEEeEhHH
Confidence 000 1222322 222 332 235556899999999999999
Q ss_pred HHhcCCCeeEEEEEeEEeecCCC-----CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHH-----HHHHHHHcCCC
Q 013344 292 AMRKGLPILGVFRTFAAVGVDPA-----IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ-----FVYCRNKLGLD 361 (445)
Q Consensus 292 a~~~g~~~~~~i~~~~~~~~~p~-----~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~-----~~~~~e~LGl~ 361 (445)
|++.+.++++.+.+++....... ..+.+...+++++|+++|++++||||+|+|++++.. ...+.+.++..
T Consensus 255 A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~ 334 (915)
T 2qo3_A 255 ARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRD 334 (915)
T ss_dssp HHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTSSS
T ss_pred hhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhccc
Confidence 99999999999999887642211 123456789999999999999999999999988754 23455667754
Q ss_pred ---CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 362 ---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 362 ---~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
..++|+++++..+||+.|++|++.++.++.+|+++
T Consensus 335 ~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~ 372 (915)
T 2qo3_A 335 RDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNG 372 (915)
T ss_dssp CCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCCcccccCcccceeCCccccchHHHHHHHHHHhcC
Confidence 35788999999999999999999999999999874
No 63
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=99.89 E-value=4.5e-23 Score=210.29 Aligned_cols=253 Identities=12% Similarity=0.079 Sum_probs=175.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHH
Q 013344 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 73 ~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~ 151 (445)
++..+|+.+|+++||+++|++|++||.|+++++++.. .+..+..++..+|++..++ +++++.+|+|++.||..|.++
T Consensus 105 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~ 182 (402)
T 1ee0_A 105 TGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVD--MPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDL 182 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCCE--ESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCC--CChHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988632 4567888888999976564 999999999999999999999
Q ss_pred HHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCC
Q 013344 152 IKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDP 231 (445)
Q Consensus 152 I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~ 231 (445)
|++|.++++.+
T Consensus 183 i~~g~~~~vLv--------------------------------------------------------------------- 193 (402)
T 1ee0_A 183 AENNKGSRVLI--------------------------------------------------------------------- 193 (402)
T ss_dssp HHHSTTCCEEE---------------------------------------------------------------------
T ss_pred HHcCCCCEEEE---------------------------------------------------------------------
Confidence 99999887611
Q ss_pred CCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcC-CCeeEEEEEeEEee
Q 013344 232 KTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG-LPILGVFRTFAAVG 310 (445)
Q Consensus 232 ~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g-~~~~~~i~~~~~~~ 310 (445)
+..|...+. + ..| ++. ..-+...+..++|||+|+||.+.+. .+ .....++.+.....
T Consensus 194 ---------vg~E~~s~~-~-------~~~-~d~-~~~~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~ 251 (402)
T 1ee0_A 194 ---------VCSEITAIL-F-------HGP-NEN-HLDSLVAQALFGDGAAALIVGSGPH---LAVERPIFEIVSTDQTI 251 (402)
T ss_dssp ---------EEEECGGGG-C-------CCC-CTT-CHHHHHHTTTBCCEEEEEEEESSCC---TTTCCCCEEEEEEEEEE
T ss_pred ---------EEEeccchh-h-------cCC-ccc-chhhhccceeEecceEEEEEecCCC---ccccCCceEEEeeeeEE
Confidence 000000000 0 000 000 0000112334799999999986542 12 11112333332221
Q ss_pred cCCC---------------CCCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCChHHHHHHHHHcCCCCCCcC
Q 013344 311 VDPA---------------IMGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGLDPEKIN 366 (445)
Q Consensus 311 ~~p~---------------~~~~--------~~~~ai~~aL~~aGl~-~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn 366 (445)
.+.. .++. ....+++++|+++|++ .+|| +|.+|+++..+...+.+.||++++++.
T Consensus 252 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~ 330 (402)
T 1ee0_A 252 LPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSV-FWMVHPGGRAILDQVERKLNLKEDKLR 330 (402)
T ss_dssp CTTCGGGEEEEEETTEECCEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSSHHHHHHHHHHTTCCTTTTH
T ss_pred cCCchHhcCceeccCceEEEecchHHHHHHHHHHHHHHHHHHHcCCCccccc-eEEECCCCHHHHHHHHHHcCCChHHhH
Confidence 1110 0111 1236888999999998 8899 899999999999999999999999987
Q ss_pred CCCChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--------eE-EEe-ecccceeEEEEEEccc
Q 013344 367 VNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--------VI-SMC-IGTGMGAAAVFERGDC 424 (445)
Q Consensus 367 ~~gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--------~~-~~~-~G~G~~~a~~l~~~~~ 424 (445)
.+-- ..+.+|||++++++.+|+++.+++. +.| .. .++ +|+|++++++++++..
T Consensus 331 ~s~~---~l~~~GNtssAsi~~~L~~~~~~g~--~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~ 393 (402)
T 1ee0_A 331 ASRH---VLSEYGNLISACVLFIIDEVRKRSM--AEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVR 393 (402)
T ss_dssp HHHH---HHHHHCBCGGGHHHHHHHHHHHHHH--HTTCSBTBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHH---HHHhcCCchhhHHHHHHHHHHHhcc--ccCCCCCCCCcceEEEEEecCCcEEEEEEEEEec
Confidence 5310 1177999999999999999876542 223 33 333 8999999988888743
No 64
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.89 E-value=1e-22 Score=229.41 Aligned_cols=253 Identities=13% Similarity=0.098 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCC-CceEEecCcCcHHHHHHHHHHHHHH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET-VPVRTVNRQCSSGLQAVADVAAAIK 153 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~-~~~~~v~~~CsSgl~Al~~A~~~I~ 153 (445)
..+|+.+|+++||+++|+++++||.|+++++.+.. .+..+..++..+|++.. +++++++.+|+|+++||..|.++|+
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~ 766 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVE--MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAE 766 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCC--CCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHH
Confidence 56699999999999999999999999999965433 45677888889999632 4689999999999999999999999
Q ss_pred cCCCCeEec-CccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceecccCCC
Q 013344 154 AGFYDIGSV-NPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK 232 (445)
Q Consensus 154 sG~~~~v~~-~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~ 232 (445)
+|.++++-+ ...... .
T Consensus 767 sG~~~~vLvvg~e~~~---------------------~------------------------------------------ 783 (979)
T 3tsy_A 767 NNAGARVLVVCSEITV---------------------V------------------------------------------ 783 (979)
T ss_dssp TSTTCEEEEEEEECTT---------------------T------------------------------------------
T ss_pred hCCCCEEEEEEEEecc---------------------h------------------------------------------
Confidence 999988711 000000 0
Q ss_pred CCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC
Q 013344 233 TGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 312 (445)
Q Consensus 233 ~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~ 312 (445)
+...+...+.+.+ .+++.++|||+|+||.+.+.+...+........++......
T Consensus 784 -----------~~~~~~~~~~~~~---------------~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (979)
T 3tsy_A 784 -----------TFRGPSEDALDSL---------------VGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNS 837 (979)
T ss_dssp -----------TCCCCCSSCHHHH---------------HHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTC
T ss_pred -----------heeCCCccCHHHH---------------hhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCc
Confidence 0000000011111 12334799999999998665433333333222233221111
Q ss_pred CCCC-----Cc----------------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCC---
Q 013344 313 PAIM-----GV----------------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVN--- 368 (445)
Q Consensus 313 p~~~-----~~----------------~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl~~~~vn~~--- 368 (445)
...+ .. ....+++++|+++|++++|||+|++|+++..+...+.++||++++++..+
T Consensus 838 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~~~ 917 (979)
T 3tsy_A 838 AGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATRHV 917 (979)
T ss_dssp TTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHH
T ss_pred hhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHHHHHcCCChHHHHHHHHH
Confidence 1000 00 13579999999999999999999999999999999999999999998876
Q ss_pred CChhcccChhhhHHHHHHHHHHHHHHhcC--CC-Ccee----e-EEEeecccceeEEEEEEccc
Q 013344 369 GGALAIGHPLGTTGARCVATLLHEMKRRG--RD-CRFG----V-ISMCIGTGMGAAAVFERGDC 424 (445)
Q Consensus 369 gG~la~Gh~~GatG~~~i~~~l~~L~~~~--~~-~~~G----~-~~~~~G~G~~~a~~l~~~~~ 424 (445)
. +.+|||++++++.+|+++.++. +. .+.| . ....+|+|++|+++++++..
T Consensus 918 l------~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~ 975 (979)
T 3tsy_A 918 L------SEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIP 975 (979)
T ss_dssp H------HHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCB
T ss_pred H------HHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHhcc
Confidence 5 8899999999999998876531 11 0111 1 33339999999999888753
No 65
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=99.89 E-value=1.9e-22 Score=206.21 Aligned_cols=242 Identities=13% Similarity=0.133 Sum_probs=172.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEecCcCcHHHHHHHHHHHHH
Q 013344 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 74 ~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~~~CsSgl~Al~~A~~~I 152 (445)
+..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..++ +++++.+|+|+++||..|.++|
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i 201 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPD--LPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLA 201 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCE--ESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCc--cchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999988732 4567788888999975564 8999999999999999999999
Q ss_pred HcCCCCeE-----ecCcc-chhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 153 KAGFYDIG-----SVNPK-VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 153 ~sG~~~~v-----~~~~~-~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
++|.++++ +..+. +.++
T Consensus 202 ~~G~~~~vLvvg~E~~s~~~~~~--------------------------------------------------------- 224 (413)
T 1xes_A 202 ENNRGARVLVICSETTAVTFRGP--------------------------------------------------------- 224 (413)
T ss_dssp HTSTTCCEEEEEEECTTTTCCCC---------------------------------------------------------
T ss_pred HcCCCCEEEEEEehhhhhhhcCC---------------------------------------------------------
Confidence 99998776 11110 0000
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC-CeeEEEEE
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFRT 305 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~-~~~~~i~~ 305 (445)
++ -..+. ...+..++|||+|+||.+.+.. ++ ....++.+
T Consensus 225 -----------------~d-----~~~~~---------------~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~ 264 (413)
T 1xes_A 225 -----------------SE-----THLDS---------------LVGQALFGDGASALIVGADPIP---QVEKACFEIVW 264 (413)
T ss_dssp -----------------CT-----TCHHH---------------HHHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEE
T ss_pred -----------------Cc-----cchhh---------------cccceeEecccEEEEEecCCCc---cccCCceEEEe
Confidence 00 00000 0112237899999999865421 21 11123333
Q ss_pred eEEeecCCC---------------CCC--------ccHHHHHHHHHHHcCCC-CCCccEEEecCCChHHHHHHHHHcCCC
Q 013344 306 FAAVGVDPA---------------IMG--------VGPAVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGLD 361 (445)
Q Consensus 306 ~~~~~~~p~---------------~~~--------~~~~~ai~~aL~~aGl~-~~DID~~e~h~~~~~~~~~~~e~LGl~ 361 (445)
.+....+.. .++ .....+++++|+++|++ ++|| +|.+|+++..+...+.+.||++
T Consensus 265 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lgl~ 343 (413)
T 1xes_A 265 TAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPGGRAILDRVEAKLNLD 343 (413)
T ss_dssp EEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHTTCC
T ss_pred eeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCCHHHHHHHHHHcCCC
Confidence 332211110 011 11236888999999998 8888 8999999999999999999999
Q ss_pred CCCcCCC---CChhcccChhhhHHHHHHHHHHHHHHhcCCCCcee--------e-EEEe-ecccceeEEEEEEcc
Q 013344 362 PEKINVN---GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG--------V-ISMC-IGTGMGAAAVFERGD 423 (445)
Q Consensus 362 ~~~vn~~---gG~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G--------~-~~~~-~G~G~~~a~~l~~~~ 423 (445)
++++..+ . +.+|||++++++.+|.++.+++. +.| + ++++ +|+|++|+++++++.
T Consensus 344 ~ek~~~s~~~l------~~~GNtssAsi~~~L~~~~~~g~--~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~ 410 (413)
T 1xes_A 344 PTKLIPTRHVM------SEYGNMSSACVHFILDQTRKASL--QNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSV 410 (413)
T ss_dssp TTTTHHHHHHH------HHHCBCGGGHHHHHHHHHHHHHH--HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred hHHhHHHHHHH------HhcCcCchhhHHHHHHHHHHhcc--ccCCCCCCCCcceEEEEEecCCcEEeEEEEEec
Confidence 9998653 3 77999999999999999876542 223 3 3333 999999988888764
No 66
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.88 E-value=1.7e-21 Score=216.68 Aligned_cols=243 Identities=21% Similarity=0.298 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeccCCCcc------------------cchHHHHHHHHcCCCCCCceE
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ------------------RASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~----vi~g~~~~~~~~------------------~~~~a~~~~~~lGl~~~~~~~ 132 (445)
...|+.+++++||+++|+++++||. |++|+..+++.. ....+..++..+|+ +.|++
T Consensus 116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 193 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL--EGPAM 193 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCC--CCCeE
Confidence 3579999999999999999999995 899988776531 01345677789999 46999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a 211 (445)
+|+++|+|++.||.+|++.|++|++|++.... .... .+ ..+.. +.
T Consensus 194 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~--------~p-------------------~~~~~--~~----- 239 (917)
T 2hg4_A 194 TVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMS--------SP-------------------GAFTE--FR----- 239 (917)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC--------ST-------------------HHHHH--HT-----
T ss_pred eecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEecccc--------Ch-------------------hhhHh--hh-----
Confidence 99999999999999999999999999981100 0000 00 00000 00
Q ss_pred HHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHH
Q 013344 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 291 (445)
Q Consensus 212 ~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~ 291 (445)
.. -.+++|.. .+| |+ +..|++.++||++++||.+.+.
T Consensus 240 -~~------------------------~~ls~~g~------------~~p-Fd-----~~adG~~~gEGagavVL~~l~~ 276 (917)
T 2hg4_A 240 -SQ------------------------GGLAADGR------------CKP-FS-----KAADGFGLAEGAGVLVLQRLSA 276 (917)
T ss_dssp -TS------------------------SCBCTTSC------------CCT-TB-----TTCCCBCBBCEEEEEEEEEHHH
T ss_pred -hc------------------------cCcCCccc------------cCc-cc-----ccccCCCCcceEEEEEEeeHHH
Confidence 00 01233322 333 33 2456777999999999999999
Q ss_pred HHhcCCCeeEEEEEeEEeecCCCC-----CCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HHHHHHcCCC
Q 013344 292 AMRKGLPILGVFRTFAAVGVDPAI-----MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VYCRNKLGLD 361 (445)
Q Consensus 292 a~~~g~~~~~~i~~~~~~~~~p~~-----~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~~~e~LGl~ 361 (445)
|++.+.++++.+.+++........ .+.+...+++++|+++|++++||||+|+|++++... ..+.+.+|..
T Consensus 277 A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~fg~~ 356 (917)
T 2hg4_A 277 ARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAE 356 (917)
T ss_dssp HHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTTTTTS
T ss_pred HHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHHhccc
Confidence 999999999999999876543322 123456899999999999999999999999998642 2334445543
Q ss_pred ---CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 362 ---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 362 ---~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
..++++++++..+||+.|++|+..+++++.+|+++
T Consensus 357 ~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~ 394 (917)
T 2hg4_A 357 RDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHG 394 (917)
T ss_dssp SCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHT
T ss_pred cCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcC
Confidence 34688888999999999999999999999999874
No 67
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=99.86 E-value=9.3e-23 Score=207.51 Aligned_cols=264 Identities=13% Similarity=0.066 Sum_probs=184.0
Q ss_pred eeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCc
Q 013344 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (445)
Q Consensus 58 ~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~ 137 (445)
.+|++.+|+. ...+++..+|+..|+++||++ ++|++||.|++|+.+++.. .+..+..++..+|++.++++++++++
T Consensus 35 ~~~Gi~~r~~-~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~a 110 (396)
T 1xpm_A 35 IGIGQTEMAV-SPVNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEA 110 (396)
T ss_dssp TTTCCSEEEE-CCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEEST
T ss_pred hhcCceEEEe-CCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCceEEEeccc
Confidence 3667765443 335789999999999999988 7899999999999988764 55678888889999766999999999
Q ss_pred CcHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 013344 138 CSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 217 (445)
Q Consensus 138 CsSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~ 217 (445)
|+||+.||..|.++|++|.++++.
T Consensus 111 C~sg~~Al~~A~~~I~sg~~~~vL-------------------------------------------------------- 134 (396)
T 1xpm_A 111 CYAATPAIQLAKDYLATRPNEKVL-------------------------------------------------------- 134 (396)
T ss_dssp TTTHHHHHHHHHHHHTTCTTCEEE--------------------------------------------------------
T ss_pred cHHHHHHHHHHHHHHHcCCCCEEE--------------------------------------------------------
Confidence 999999999999999999887651
Q ss_pred ccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCC
Q 013344 218 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 297 (445)
Q Consensus 218 ~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~ 297 (445)
++..|. .+ . .++. .++..++|||+|+||.+.+
T Consensus 135 ----------------------vvg~e~-s~--~----------~~~~------~~~~~~GdGA~A~vl~~~~------- 166 (396)
T 1xpm_A 135 ----------------------VIATDT-AR--Y----------GLNS------GGEPTQGAGAVAMVIAHNP------- 166 (396)
T ss_dssp ----------------------EEEEEE-EC--C----------CTTC------SSGGGCEEEEEEEEEEESC-------
T ss_pred ----------------------EEeehh-hc--c----------ccCC------CCCcccccceEEEEeccCC-------
Confidence 111110 00 0 0000 1223479999999998642
Q ss_pred CeeEEEEEeEEee------cCCCC------CCcc--------HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHH
Q 013344 298 PILGVFRTFAAVG------VDPAI------MGVG--------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNK 357 (445)
Q Consensus 298 ~~~~~i~~~~~~~------~~p~~------~~~~--------~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~~~~e~ 357 (445)
.++....+.+... ..|.. .+.. ...+++++|+++|++++|||+|.+|+++..+.....+.
T Consensus 167 ~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~~~~~~~~ 246 (396)
T 1xpm_A 167 SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALES 246 (396)
T ss_dssp SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHT
T ss_pred ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHHHHHHHHH
Confidence 1222222222111 12211 1111 34789999999999999999999999999998888888
Q ss_pred c-----CCCCCCcCCCC-ChhcccChhhhHHHHHHHHHHHHHHhcCCCCceeeEEEe--ecccceeEEEEEE-ccccccc
Q 013344 358 L-----GLDPEKINVNG-GALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC--IGTGMGAAAVFER-GDCADEL 428 (445)
Q Consensus 358 L-----Gl~~~~vn~~g-G~la~Gh~~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~--~G~G~~~a~~l~~-~~~~~~~ 428 (445)
| +++++++..+. =.+.+.+.+||+++++++..|.++.+++.. +.|..+++ +|+|+++.+.+.+ .+.+++.
T Consensus 247 l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l-~~Gd~ill~s~GsG~~~~~~~~~v~~~~~~~ 325 (396)
T 1xpm_A 247 IIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDL-QAGETIGLFSYGSGSVGEFYSATLVEGYKDH 325 (396)
T ss_dssp TGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCC-CTTCEEEEEEEETTTEEEEEEEEECTTGGGG
T ss_pred HHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCC-CCCCEEEEEEECcchhheEEEEEEcccHHHH
Confidence 8 77766542110 001223678999999999999998877654 56665444 7888887554444 4555544
Q ss_pred cc
Q 013344 429 CN 430 (445)
Q Consensus 429 ~~ 430 (445)
..
T Consensus 326 ~~ 327 (396)
T 1xpm_A 326 LD 327 (396)
T ss_dssp CC
T ss_pred hh
Confidence 33
No 68
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=99.85 E-value=2.5e-22 Score=203.45 Aligned_cols=254 Identities=12% Similarity=0.035 Sum_probs=177.2
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcC
Q 013344 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (445)
Q Consensus 59 rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~C 138 (445)
+|++.+++. ...+++..+|+.+|+++||++++ |++||.|++++.+++.. .+..+..++..+|++.++++++++.+|
T Consensus 41 ~~Gi~~r~~-~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~-~ps~a~~v~~~LGl~~~~~~~dv~~aC 116 (388)
T 3v4n_A 41 GIGQDQMAV-NPISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDE-SKAAAVVLHRLMGIQPFARSFEIKEAX 116 (388)
T ss_dssp TTCCCEEEC-CCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESGG
T ss_pred HhCceEEEE-CCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCc-CccHHHHHHHHcCCCCCceEeehhhhh
Confidence 566665432 34578999999999999999997 99999999999998875 556788888899997668999999999
Q ss_pred cHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc
Q 013344 139 SSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFK 218 (445)
Q Consensus 139 sSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~ 218 (445)
+|++.||..|.++|++|.++++.
T Consensus 117 ~gg~~AL~~A~~~i~sg~~~~vL--------------------------------------------------------- 139 (388)
T 3v4n_A 117 YGATAGLQLAKNHVALHPDKKVL--------------------------------------------------------- 139 (388)
T ss_dssp GHHHHHHHHHHHHHHHCTTCEEE---------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHhcCCCCEEE---------------------------------------------------------
Confidence 99999999999999999887661
Q ss_pred cccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCC
Q 013344 219 DEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLP 298 (445)
Q Consensus 219 ~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~ 298 (445)
++..|.. . ..++. .+...++|||+|+||...+.
T Consensus 140 ---------------------Vvg~e~~-s------------~~~~~------~~~~lfGDGA~A~ll~~~~~------- 172 (388)
T 3v4n_A 140 ---------------------VVAADIA-K------------YGLNS------GGEPTQGAGAVAMLVSSEPR------- 172 (388)
T ss_dssp ---------------------EEEEEEE-C------------CCTTC------TTGGGCEEEEEEEEEEESCS-------
T ss_pred ---------------------EEEehhh-c------------ccCCC------CCCCccccceeEEEeecCCC-------
Confidence 1111100 0 00000 01233789999999987431
Q ss_pred eeEEEEE-eEEe-e----cCCCCC------C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-------
Q 013344 299 ILGVFRT-FAAV-G----VDPAIM------G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF------- 351 (445)
Q Consensus 299 ~~~~i~~-~~~~-~----~~p~~~------~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~------- 351 (445)
++..... .... . ..|... + .....+++++|+++|++++|||+|.+|++|..+.
T Consensus 173 il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~ka~~ri 252 (388)
T 3v4n_A 173 ILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKKALLAK 252 (388)
T ss_dssp SEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHHHHHHH
T ss_pred ceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHHHHHHH
Confidence 1111000 0100 0 112110 1 0123688999999999999999999999886532
Q ss_pred -----HHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc-CCCCceeeEEEe--ecccceeEEEE-EEc
Q 013344 352 -----VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR-GRDCRFGVISMC--IGTGMGAAAVF-ERG 422 (445)
Q Consensus 352 -----~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~-~~~~~~G~~~~~--~G~G~~~a~~l-~~~ 422 (445)
..+.+.|+++.+++..+. ..+||+++++++..|.++.++ +.. +.|..+++ +|+|+++.+.. ...
T Consensus 253 l~~~~~~~~~~l~~~~e~~~~~~------~~~GN~~sASi~l~L~~~l~~~g~~-~~Gd~ill~s~GsG~~ae~~~~~v~ 325 (388)
T 3v4n_A 253 ISDQTEAEQERILARYEESIIYS------RRVGNLYTGSLYLGLISLLENATTL-TAGNQIGLFSYGSGAVAEFFTGELV 325 (388)
T ss_dssp STTSCHHHHHHHHHHHHHHTTTG------GGTCCCGGGHHHHHHHHHHHHCSSC-CTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred HhcccHHHHHHhCCCHHHHhhHH------HhcCchHHHHHHHHHHHHHHhcCcC-CCCCEEEEEEecCcceeEEEEEEEc
Confidence 345677888888876555 788999999999999998877 444 66765444 78888875433 333
Q ss_pred ccccc
Q 013344 423 DCADE 427 (445)
Q Consensus 423 ~~~~~ 427 (445)
+.+++
T Consensus 326 ~~~~~ 330 (388)
T 3v4n_A 326 AGYQN 330 (388)
T ss_dssp TTGGG
T ss_pred cCHHH
Confidence 44443
No 69
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=99.84 E-value=6.4e-22 Score=202.19 Aligned_cols=254 Identities=13% Similarity=0.008 Sum_probs=174.3
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcC
Q 013344 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (445)
Q Consensus 59 rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~C 138 (445)
+|++.+++. ...+++..+|+.+|+++||++++ |++||.|++++.+++.. .+..+..++..||++.++++++++.+|
T Consensus 70 ~~Gi~~r~~-a~~~e~~~~La~~Aa~~aL~~ag--~~dId~li~~t~t~~~~-~ps~a~~v~~~LGl~~~~~~~dv~~aC 145 (425)
T 3sqz_A 70 GLLLNALSI-APITDDVVTLAAGSANEILTAED--KEKIDMVILATESSVDQ-SKAGAVYVHSLLGIQPFARSFEMKEAA 145 (425)
T ss_dssp TTCCCEEEE-CCTTSCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSCCSCS-SSCHHHHHHHHTTCCSSCEEEEECCC-
T ss_pred HcCeEEEEE-CCCCCCHHHHHHHHHHHHHHhCC--hhhCCEEEEEecccccc-cchHHHHHHHHhCCCCCeeEEEEcCHh
Confidence 455554432 34578999999999999999997 99999999999988765 456778888899997569999999999
Q ss_pred cHHHHHHHHHHHHHHcCCCCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc
Q 013344 139 SSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFK 218 (445)
Q Consensus 139 sSgl~Al~~A~~~I~sG~~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~ 218 (445)
+|++.||..|.++|++|.++.+.
T Consensus 146 ~gg~~AL~~A~~~i~sg~~~~vL--------------------------------------------------------- 168 (425)
T 3sqz_A 146 YSATAALNYAKLHVEKHPDTRVL--------------------------------------------------------- 168 (425)
T ss_dssp CHHHHHHHHHHHHHHHSTTCEEE---------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCCCeEE---------------------------------------------------------
Confidence 99999999999999999877651
Q ss_pred cccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCC
Q 013344 219 DEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLP 298 (445)
Q Consensus 219 ~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~ 298 (445)
++..|-. .. .++. .++..++|||+|+||...+ .
T Consensus 169 ---------------------Vvgae~~-s~------------~~~~------~~~~lfGDGA~A~ll~~~~-------~ 201 (425)
T 3sqz_A 169 ---------------------VLASDIA-KY------------GIGT------PGESTQGAGSIAMLVKKDP-------R 201 (425)
T ss_dssp ---------------------EEEEEEE-CC------------CTTS------GGGGGCEEEEEEEEEEESC-------S
T ss_pred ---------------------EEEEehh-cc------------cCCC------CCCCcccceeeEEEeecCC-------c
Confidence 1111110 00 0000 0123379999999998743 1
Q ss_pred eeEEEE---EeEEee---cCCCC---C---C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH------
Q 013344 299 ILGVFR---TFAAVG---VDPAI---M---G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV------ 352 (445)
Q Consensus 299 ~~~~i~---~~~~~~---~~p~~---~---~--------~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~~------ 352 (445)
++.... ++.... ..|.. . + .....+++++|+++|++++|||+|.+|++|..+..
T Consensus 202 il~~~~~s~~~~~d~~df~~p~~~~~~~~dG~~~~~~~~~~l~~~~~~~l~~~gl~~~Did~~v~Hqp~~k~~~ka~~ri 281 (425)
T 3sqz_A 202 ILILHDETLAQTRDIMDFWRPNYTTTPYVNGMYSTKQYLDMLKTTWAEYQKRFDVSLTDFAAFCFHLPFPKLALKGFNKI 281 (425)
T ss_dssp SEEECSCCEEEECCCCSEECCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHHH
T ss_pred eEEEEeecccchhhcccccccCCCcceeeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEECCCcchhHHHHHHHH
Confidence 111100 111000 11211 0 1 01237889999999999999999999998866432
Q ss_pred -------HHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc-CCCCceeeEEEe--ecccceeEEEEEEc
Q 013344 353 -------YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR-GRDCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 353 -------~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~-~~~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
.+.+.|+++.+++..+. ..+||+++++++..|.++.++ +.. +.|..+++ +|+|+++.+...+.
T Consensus 282 l~~~~~~~~~~~l~~~~e~~~~~~------~~~GNt~sASi~l~L~~~l~~~g~l-~~Gd~ill~s~GsG~~ae~~s~~v 354 (425)
T 3sqz_A 282 MDKQVPSDLQEKLKVNFEASILYS------KQIGNIYTGSLFLGLLSLLENSQNL-VAGDKIALFSYGSGAVAEIFTGTL 354 (425)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHTTH------HHHBCCGGGHHHHHHHHHHHHCSSC-CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred HhccchHHHHHHhCCCHHHHhhHH------hccCccHHHHHHHHHHHHHHhcCCC-CCCCEEEEEcccCCcceEEEEEEE
Confidence 45567777777765555 789999999999999998877 443 66765544 78887765444433
Q ss_pred -ccccc
Q 013344 423 -DCADE 427 (445)
Q Consensus 423 -~~~~~ 427 (445)
+.+++
T Consensus 355 ~~~~~~ 360 (425)
T 3sqz_A 355 VKGFKE 360 (425)
T ss_dssp CTTGGG
T ss_pred cccHHH
Confidence 44433
No 70
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=99.84 E-value=6.7e-21 Score=196.75 Aligned_cols=245 Identities=15% Similarity=0.165 Sum_probs=170.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCC--CCCCceEEecCcCcHHHHHHHHH
Q 013344 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADV 148 (445)
Q Consensus 71 ~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl--~~~~~~~~v~~~CsSgl~Al~~A 148 (445)
.++++.+|+.+|+++||+++|++|++||.|++|+.+++.. .+..+..++..+|+ +.++++++++++|+||+.||..|
T Consensus 48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A 126 (450)
T 2f82_A 48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNC 126 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCS-SSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCC-CCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHH
Confidence 5789999999999999999999999999999999987764 55678888888888 44789999999999999999999
Q ss_pred HHHHHcCCC--CeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 149 AAAIKAGFY--DIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 149 ~~~I~sG~~--~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
.++|++|.+ +++.
T Consensus 127 ~~~I~sg~~~~~~vL----------------------------------------------------------------- 141 (450)
T 2f82_A 127 VNWVESNSWDGRYGL----------------------------------------------------------------- 141 (450)
T ss_dssp HHHHHSTTCCSCEEE-----------------------------------------------------------------
T ss_pred HHHHHcCCCcCCeEE-----------------------------------------------------------------
Confidence 999999986 5541
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
++..|- .. +. +. .....++|||+|+||.+.+. ........+.
T Consensus 142 -------------Vvg~e~-~~--------------~~-~~----~~~~~fGDGA~A~ll~~~~~-----~~~~~~~~g~ 183 (450)
T 2f82_A 142 -------------VICTDS-AV--------------YA-EG----PARPTGGAAAIAMLIGPDAP-----IVFESKLRGS 183 (450)
T ss_dssp -------------EEEEEE-EC--------------CS-SS----TTGGGCEEEEEEEEEESSCS-----EEEEEEEEEE
T ss_pred -------------EEEeee-cc--------------cc-CC----CCCcccccceEEEEeccCCc-----eEEEecccee
Confidence 111110 00 00 00 01223799999999986531 1111111222
Q ss_pred EEee----cCCC-------CCCc--------cHHHHHHHHHH------HcCCCCCCccEEEecCCChHHHHHHHHHcCC-
Q 013344 307 AAVG----VDPA-------IMGV--------GPAVAIPAAVK------SAGLQLDDIDLFEINEAFASQFVYCRNKLGL- 360 (445)
Q Consensus 307 ~~~~----~~p~-------~~~~--------~~~~ai~~aL~------~aGl~~~DID~~e~h~~~~~~~~~~~e~LGl- 360 (445)
.... ..|. ..+. ....+++.+|+ ++|++++|||+|.+|+++..+...+.+.|++
T Consensus 184 ~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~did~~v~Hq~~~~i~~~~~~~L~~~ 263 (450)
T 2f82_A 184 HMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLYN 263 (450)
T ss_dssp EECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred ehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhcCEEEecCChHHHHHHHHHHhccc
Confidence 2111 1121 0111 12257777886 8999999999999999999999999999983
Q ss_pred -----------------CC---------------C-------------CcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 361 -----------------DP---------------E-------------KINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 361 -----------------~~---------------~-------------~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
++ + ++.++. ...+.+||+++++++..|..+.+
T Consensus 264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~---~~~~~~GN~~saSi~l~L~~~l~ 340 (450)
T 2f82_A 264 DFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTT---LVPKQVGNMYTASLYAAFASLVH 340 (450)
T ss_dssp HHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGC---HHHHHHCCCGGGHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHH---HHHHhcCchHHHHHHHHHHHHHH
Confidence 32 1 222211 11267899999999999998876
Q ss_pred cCC-CCceeeEEEe--ecccceeEEEEEEcc
Q 013344 396 RGR-DCRFGVISMC--IGTGMGAAAVFERGD 423 (445)
Q Consensus 396 ~~~-~~~~G~~~~~--~G~G~~~a~~l~~~~ 423 (445)
++. . +.|..+++ +|+|+++++++.++.
T Consensus 341 ~~~~~-~~Gd~ill~s~GsG~~~~~~~l~~~ 370 (450)
T 2f82_A 341 NKHSD-LAGKRVVMFSYGSGSTATMFSLRLC 370 (450)
T ss_dssp HHGGG-CTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred hCccC-CCCCEEEEEeecCCcccEEEEEEEe
Confidence 542 2 44554433 899999877777663
No 71
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=99.83 E-value=7.8e-21 Score=194.90 Aligned_cols=242 Identities=14% Similarity=0.124 Sum_probs=163.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCC--CCCCceEEecCcCcHHHHHHHHH
Q 013344 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADV 148 (445)
Q Consensus 71 ~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl--~~~~~~~~v~~~CsSgl~Al~~A 148 (445)
.+++..+|+.+|+++||+++|++|++||.|++++.+++.. .+..+..++..||+ ..++++++++.+|+|++.||..|
T Consensus 50 ~~E~~~~La~~Aa~~AL~~agi~~~dId~IivaT~t~~~~-~ps~A~~v~~~LGl~g~~~~~a~Dv~~ACsGg~~AL~~A 128 (460)
T 2v4w_A 50 VQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDK-SKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNA 128 (460)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CCcHHHHHHHHhCCCCCCCcEEEEecchhHHHHHHHHHH
Confidence 4688999999999999999999999999999999988875 44566677778998 34689999999999999999999
Q ss_pred HHHHHcCCC--CeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCccccccccee
Q 013344 149 AAAIKAGFY--DIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 226 (445)
Q Consensus 149 ~~~I~sG~~--~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~ 226 (445)
.++|++|.+ +.+
T Consensus 129 ~~~I~sg~~~~~~a------------------------------------------------------------------ 142 (460)
T 2v4w_A 129 ANWMESSSWDGRYA------------------------------------------------------------------ 142 (460)
T ss_dssp HHHHTSTTCCSCEE------------------------------------------------------------------
T ss_pred HHHHHhCCccCCEE------------------------------------------------------------------
Confidence 999999974 443
Q ss_pred cccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEe
Q 013344 227 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTF 306 (445)
Q Consensus 227 ~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~ 306 (445)
.+|..|- . . ..+.....| .+|||+|+||..... -...+...+.....
T Consensus 143 ------------LVVgaE~-~------------s-~~~~~~r~t------~GDGA~A~ll~~~~~-l~~~~~~~Gs~~~~ 189 (460)
T 2v4w_A 143 ------------MVVCGDI-A------------V-YPSGNARPT------GGAGAVAMLIGPKAP-LALERGLRGTHMEN 189 (460)
T ss_dssp ------------EEEEEEE-E------------C-CCSSTTGGG------CEEEEEEEEEESSCS-EEECTTCCEEEECC
T ss_pred ------------EEEeccc-c------------c-ccCCCCCcc------cccceeEEEeecCCC-ceEEEcceecceee
Confidence 1122211 0 0 000000011 389999999986421 00000011111100
Q ss_pred EEeecCCCC------C-Cc--------cHHHH-------HHHHHHH----cCCCCCCccEEEecCCChHHHHHHHHHcCC
Q 013344 307 AAVGVDPAI------M-GV--------GPAVA-------IPAAVKS----AGLQLDDIDLFEINEAFASQFVYCRNKLGL 360 (445)
Q Consensus 307 ~~~~~~p~~------~-~~--------~~~~a-------i~~aL~~----aGl~~~DID~~e~h~~~~~~~~~~~e~LGl 360 (445)
......|.. | |. ....+ ++++|++ +|++++|||+|.+||+|..+.....++|++
T Consensus 190 l~d~~~p~~~~~~~~mdG~~v~~~av~~l~~~~~~y~~~~~~~l~~~~~~~gl~~~did~~v~Hqan~rii~~~~~rL~~ 269 (460)
T 2v4w_A 190 VYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQKSLARLMF 269 (460)
T ss_dssp CCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGCSEEEECCSSHHHHHHHHHHHHH
T ss_pred eeccCCCCCCCCCeEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCHHHhceEeecCCchHHHHHHHHHcCC
Confidence 000011211 1 10 01245 6777777 999999999999999999999999999998
Q ss_pred C----------------------------------------------CCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 361 D----------------------------------------------PEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 361 ~----------------------------------------------~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
+ .+++.++. .+-+-+|||++++|+.+|..+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ekv~~~l---~~~~~~GNt~aASiplaL~s~l 346 (460)
T 2v4w_A 270 NDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASL---YLSTHNGNMYTSSLYGCLASLL 346 (460)
T ss_dssp HHHHHSCHHHHHHHCGGGGGGTTCCGGGGTTCHHHHHHHHHHHHHHHHHHTGGGG---HHHHHHCCCGGGHHHHHHHHHH
T ss_pred CcccccccccccccccchhhhccccccccccchhHHHHHHhhhhhhhHhhccccc---chhhccCccHHHHHHHHHHHHH
Confidence 7 24444332 1126789999999999999988
Q ss_pred hcCC--CCceeeEEEe--ecccceeE
Q 013344 395 RRGR--DCRFGVISMC--IGTGMGAA 416 (445)
Q Consensus 395 ~~~~--~~~~G~~~~~--~G~G~~~a 416 (445)
+++. . +.|..+++ +|+|+++.
T Consensus 347 ~~~~~~~-~~G~rill~syGsG~~s~ 371 (460)
T 2v4w_A 347 SHHSAQE-LAGSRIGAFSYGSGLAAS 371 (460)
T ss_dssp HHSCHHH-HTTCEEEEEEEETTTEEE
T ss_pred HhCCccc-CCCCEEEEEEecCCccee
Confidence 7753 2 34554444 77777653
No 72
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.83 E-value=1.7e-19 Score=201.51 Aligned_cols=239 Identities=23% Similarity=0.265 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCc------------------ccchHHHHHHHHcCCCCCCceE
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPVR 132 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~------------------~~~~~a~~~~~~lGl~~~~~~~ 132 (445)
...|+.+++++||++||+++++|| +|++|+...++. .....+..++..+|+ +.|++
T Consensus 80 ~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~GPs~ 157 (965)
T 3hhd_A 80 QLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF--RGPSI 157 (965)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCC--CCCee
Confidence 356999999999999999999999 788887665431 012456778889999 47999
Q ss_pred EecCcCcHHHHHHHHHHHHHHcCCCCeEecC-ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 013344 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGSVN-PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211 (445)
Q Consensus 133 ~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~-~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a 211 (445)
+|+++|+|++.||.+|++.|++|++|++... .... .+. ..+.. +.+.
T Consensus 158 tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~------------------------~~p---~~~~~--~~~~--- 205 (965)
T 3hhd_A 158 ALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVL------------------------LKP---NTSVQ--FLRL--- 205 (965)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC------------------------CCH---HHHHH--HHHH---
T ss_pred eecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccc------------------------cCH---HHHHH--HHhc---
Confidence 9999999999999999999999999998110 0000 000 00000 0000
Q ss_pred HHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHH
Q 013344 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 291 (445)
Q Consensus 212 ~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~ 291 (445)
+ .+++|..+ +| |+. ..+...++||++++||.+.+.
T Consensus 206 ---~------------------------~ls~~g~~------------~~-Fd~-----~adG~~~gEGagavvL~~l~~ 240 (965)
T 3hhd_A 206 ---G------------------------MLSPEGTC------------KA-FDT-----AGNGYCRSEGVVAVLLTKKSL 240 (965)
T ss_dssp ---T------------------------CBCTTCCC------------CT-TBT-----TCCSBCBBCEEEEEEEEEGGG
T ss_pred ---c------------------------CcCCCCcc------------cc-chh-----ccCCccccceEEEEEEecHHH
Confidence 0 12223222 22 332 122333799999999999887
Q ss_pred HHhcCCCeeEEEEEeEEeecCCCCC------CccHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHH-HHHHcCC
Q 013344 292 AMRKGLPILGVFRTFAAVGVDPAIM------GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVY-CRNKLGL 360 (445)
Q Consensus 292 a~~~g~~~~~~i~~~~~~~~~p~~~------~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~----~~~-~~e~LGl 360 (445)
|+ ++++.+.+++......... +.+...+++++|+++|++++||||+|.|.+++.. +.. +.+.++-
T Consensus 241 A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~ 316 (965)
T 3hhd_A 241 AR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCA 316 (965)
T ss_dssp CS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHCS
T ss_pred cC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhcc
Confidence 75 4788999988875443322 2346789999999999999999999999998853 333 3344553
Q ss_pred C-CCCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 361 D-PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 361 ~-~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
. ..++....-+-.+||+.|++|++.++.++.+|+++
T Consensus 317 ~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~ 353 (965)
T 3hhd_A 317 TRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHG 353 (965)
T ss_dssp SCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCceeeeccccccccchhhhhHHHHHHHHHHHhcC
Confidence 2 23454444455579999999999999999999874
No 73
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.82 E-value=2.5e-19 Score=216.04 Aligned_cols=249 Identities=16% Similarity=0.171 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC--------cEEEEeccCCCcc------------------------cchHHHHHHHH
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVG--------DIVVGTVLAPGSQ------------------------RASECRMAAFY 122 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId--------~vi~g~~~~~~~~------------------------~~~~a~~~~~~ 122 (445)
...|+.+++++||+++|+++++|+ +|++|+..+.... ....++.+...
T Consensus 2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D 2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence 467999999999999999999885 5888886432100 01123333345
Q ss_pred cCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEe---cCccchhhhhhhccccchhHhH-HHHHHHhCCCHHHHH
Q 013344 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGS---VNPKVKAFEQAQNCLLPMGVTS-ENVAHRFGVTRKEQD 198 (445)
Q Consensus 123 lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~---~~~~~~~~~~~~~~~~~mg~~a-e~~a~~~gisre~~d 198 (445)
+|+ ++|+++|+++|+|+++||.+|+++|++|++|++. ... +... .......|+..+ ..++..++
T Consensus 2727 lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~--~~~~f~~~~als~~~~~~~~~------- 2794 (3089)
T 3zen_D 2727 VGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLE--AIIGFGDMAATADTEMMRAKG------- 2794 (3089)
T ss_dssp TCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHH--HHHHHHHHTCBCCHHHHHHTT-------
T ss_pred cCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHH--HHHHHHHhhhhhcchhhhhcc-------
Confidence 698 5799999999999999999999999999999981 110 0000 000000000000 00000000
Q ss_pred HHHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCC
Q 013344 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVS 278 (445)
Q Consensus 199 ~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~ 278 (445)
.+++.. ++| |+. ..+...++
T Consensus 2795 ------------------------------------------~sp~~~------------crp-Fd~-----~~dG~v~G 2814 (3089)
T 3zen_D 2795 ------------------------------------------ISDSKF------------SRA-NDR-----RRLGFLEA 2814 (3089)
T ss_dssp ------------------------------------------CCTTTS------------CCS-SBT-----TCCCBCBB
T ss_pred ------------------------------------------CCcccc------------cCc-ccc-----CCCCEEEe
Confidence 011111 333 332 12233379
Q ss_pred CCCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCCCCC-------------ccHHHHHHHHHHHcCCCCCCccEEEecC
Q 013344 279 DGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG-------------VGPAVAIPAAVKSAGLQLDDIDLFEINE 345 (445)
Q Consensus 279 DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~~~~-------------~~~~~ai~~aL~~aGl~~~DID~~e~h~ 345 (445)
||++++||++.+.|++.|.++++.+.+.+.. .++..++ .+...+++++|+++|++++||||+|.|.
T Consensus 2815 EGAgavVL~~~e~A~~~G~~I~avI~g~~~n-~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaHG 2893 (3089)
T 3zen_D 2815 QGGGTILLARGDLALKMGLPVLAVVGYAQSF-ADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGADDIAVISKHD 2893 (3089)
T ss_dssp CEEEEEEEEEHHHHHHHTCCCCEEEEEEEEE-CCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECCC
T ss_pred ccceEEEEeeHHHHHhCCCceEEEEEEEEEe-cCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEec
Confidence 9999999999999999999999955555543 2222111 1334689999999999999999999999
Q ss_pred CChHH----HH----HHHHHcCCCC-CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 346 AFASQ----FV----YCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 346 ~~~~~----~~----~~~e~LGl~~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
+++.. +. .+.+.+|... .+++.++++..+||+.|++|+++++.++.+|+++
T Consensus 2894 TGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g 2953 (3089)
T 3zen_D 2894 TSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDG 2953 (3089)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHC
T ss_pred CCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcC
Confidence 98863 22 3566788775 6799999999999999999999999999999874
No 74
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=99.79 E-value=1.2e-19 Score=188.50 Aligned_cols=258 Identities=15% Similarity=0.096 Sum_probs=168.2
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHH---HcCCCCCCceEEec
Q 013344 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAF---YAGFPETVPVRTVN 135 (445)
Q Consensus 59 rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~---~lGl~~~~~~~~v~ 135 (445)
++++.+++. ...+++..+|+.+|+++||+++|++|++||.|++++.+++.. .+..+..++. .+|++ ++++++++
T Consensus 58 ~~Gi~~r~~-~~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~v~~~L~~lG~~-~~~~~dv~ 134 (478)
T 2p8u_A 58 GLGQAKMGF-CTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDK-SKSVKTNLMQLFEESGNT-DIEGIDTT 134 (478)
T ss_dssp CCCCCEEEC-CCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTTTTTCC-CCBCCEEE
T ss_pred ccCceEEEe-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCccc-CccHHHHHHHHHhhcCCC-CceEEEEc
Confidence 455544322 234788999999999999999999999999999999988764 3445666663 45554 68999999
Q ss_pred CcCcHHHHHHHHHHHHHHcCC--CCeEecCccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 013344 136 RQCSSGLQAVADVAAAIKAGF--YDIGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 213 (445)
Q Consensus 136 ~~CsSgl~Al~~A~~~I~sG~--~~~v~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ 213 (445)
.+|+||+.||..|.++|++|. .+.+.
T Consensus 135 ~aC~gg~~AL~~A~~~i~sg~~~~~~aL---------------------------------------------------- 162 (478)
T 2p8u_A 135 NACYGGTAAVFNAVNWIESSSWDGRYAL---------------------------------------------------- 162 (478)
T ss_dssp SGGGHHHHHHHHHHHHHTSTTCCSCEEE----------------------------------------------------
T ss_pred chhHHHHHHHHHHHHHHHcCCccCCEEE----------------------------------------------------
Confidence 999999999999999999998 66551
Q ss_pred cCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHH
Q 013344 214 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 293 (445)
Q Consensus 214 ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~ 293 (445)
++..|- .+ +. ++. ....++|||+|+||...+. .
T Consensus 163 --------------------------VV~~Ei-a~--------------~~-~~~----~~~~fGdGA~A~Ll~~~~~-~ 195 (478)
T 2p8u_A 163 --------------------------VVAGDI-AV--------------YA-TGN----ARPTGGVGAVALLIGPNAP-L 195 (478)
T ss_dssp --------------------------EEEEEE-EC--------------CC-SST----TGGGCEEEEEEEEEESSCS-E
T ss_pred --------------------------EEEeee-ec--------------cc-CCC----CCCcccceeEEEEEecCCC-c
Confidence 111110 00 00 000 1223789999999986431 0
Q ss_pred hcCCCeeEEEEEeEEeecCCC------CC-Cc--------c---HHHHHHHHHH--------HcCCCCCCccEEEecCCC
Q 013344 294 RKGLPILGVFRTFAAVGVDPA------IM-GV--------G---PAVAIPAAVK--------SAGLQLDDIDLFEINEAF 347 (445)
Q Consensus 294 ~~g~~~~~~i~~~~~~~~~p~------~~-~~--------~---~~~ai~~aL~--------~aGl~~~DID~~e~h~~~ 347 (445)
.+.....+....-...-..|. .+ +. . ....+.+.++ ++|++++|||+|.+|+++
T Consensus 196 ~l~~~~~gs~~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~~~~did~~v~H~~~ 275 (478)
T 2p8u_A 196 IFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPY 275 (478)
T ss_dssp EECTTCCEEEECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCGGGCSEEEECCSS
T ss_pred eEeeccceecccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCCChHHcCEEEecCCc
Confidence 001000111100000001121 01 10 0 0134566666 789999999999999999
Q ss_pred hHHHHHHHHHcC------------------------CCC---------C-------------CcCCCCChhcccChhhhH
Q 013344 348 ASQFVYCRNKLG------------------------LDP---------E-------------KINVNGGALAIGHPLGTT 381 (445)
Q Consensus 348 ~~~~~~~~e~LG------------------------l~~---------~-------------~vn~~gG~la~Gh~~Gat 381 (445)
..+...+.+.|+ +++ + ++-++- ...+.+||+
T Consensus 276 ~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~~~---~~~~~~GN~ 352 (478)
T 2p8u_A 276 CKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASL---LVSNQNGNM 352 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTGGG---HHHHHHCCC
T ss_pred HHHHHHHHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHHHH---HHHHhcCch
Confidence 999999999998 444 2 222221 122678999
Q ss_pred HHHHHHHHHHHHHhcCC--CCceeeEEEe--ecccceeEEEEEEc
Q 013344 382 GARCVATLLHEMKRRGR--DCRFGVISMC--IGTGMGAAAVFERG 422 (445)
Q Consensus 382 G~~~i~~~l~~L~~~~~--~~~~G~~~~~--~G~G~~~a~~l~~~ 422 (445)
++++++..|..+.+++. . +.|..+++ +|+|+++++.++++
T Consensus 353 ~saSi~l~L~~ll~~~~~~~-~~Gdrill~s~GsG~~~~~~~l~~ 396 (478)
T 2p8u_A 353 YTSSVYGSLASVLAQYSPQQ-LAGKRIGVFSYGSGLAATLYSLKV 396 (478)
T ss_dssp GGGHHHHHHHHHHHHSCHHH-HTTCEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCccC-CCCCEEEEEEEcchhhhEEEEEEE
Confidence 99999999999877653 2 34543333 89999987777665
No 75
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.79 E-value=1.2e-19 Score=177.96 Aligned_cols=237 Identities=18% Similarity=0.224 Sum_probs=153.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecCcCcHHHHHHHHHHHH
Q 013344 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (445)
Q Consensus 72 ~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~ 151 (445)
++...+|+.+|+++||+++|++|+|||.|++|+.++.. .++..++..+| +|+++|+.+|+|+++||..|+++
T Consensus 52 e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~----~~A~~va~~Lg----ipafdV~~ACsg~~~AL~~Aa~~ 123 (347)
T 3lma_A 52 EMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN----VTANYVARHLK----IPFLCLFGACSTSMESIAISSAL 123 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS----TTHHHHHHHHC----CCEEEBCCSTTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch----hHHHHHHHHhC----CCEEEecChhHHHHHHHHHHHHH
Confidence 44668899999999999999999999999999998832 25666666775 46999999999999999999999
Q ss_pred HHcCCCCeEe-cC-ccchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceeccc
Q 013344 152 IKAGFYDIGS-VN-PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIV 229 (445)
Q Consensus 152 I~sG~~~~v~-~~-~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~ 229 (445)
|++|.++++. .. +++....
T Consensus 124 I~sG~~~~VLVVGaE~~S~ae----------------------------------------------------------- 144 (347)
T 3lma_A 124 IDGGFAKRALAATSSHNATAE----------------------------------------------------------- 144 (347)
T ss_dssp HHTTSCSEEEEEEEECGGGTT-----------------------------------------------------------
T ss_pred HhcCCCCEEEEEEeccccchh-----------------------------------------------------------
Confidence 9999999881 11 0110000
Q ss_pred CCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHHHhcCCCeeEEEEEeEEe
Q 013344 230 DPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAV 309 (445)
Q Consensus 230 ~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a~~~g~~~~~~i~~~~~~ 309 (445)
.+.|.+. ++...+|.+. .-+.|||+|+||.+... .+ ++.+...-
T Consensus 145 ---------------rq~r~p~---e~g~q~p~ta----------~~t~dGAGA~VL~~~g~------~p--~I~~~t~G 188 (347)
T 3lma_A 145 ---------------RQFRYPT---EYGGQKPGTA----------TSTVTGSGAVVLSQQPG------GI--KITSATVG 188 (347)
T ss_dssp ---------------CCC-----------------------------CCCEEEEEEEESSCC------SE--EEEEEECC
T ss_pred ---------------hhccCcc---hhcccCCchh----------cEEccceeEEEEEecCC------CC--ceeeeeee
Confidence 0000000 0001112111 11458999999986431 12 22221110
Q ss_pred ------ecCCCCCCcc--H--HHHHHHHHHHcCCCCCCccEEE---ecCCChHHHHHHHHHcCCCCCCcCCCCChhcccC
Q 013344 310 ------GVDPAIMGVG--P--AVAIPAAVKSAGLQLDDIDLFE---INEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 376 (445)
Q Consensus 310 ------~~~p~~~~~~--~--~~ai~~aL~~aGl~~~DID~~e---~h~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh 376 (445)
..+|..|+.. | ...|.+.|+++|++++|+|+|. +|+.+..+...+++++|++.++....=|.+-++.
T Consensus 189 kvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~ 268 (347)
T 3lma_A 189 RVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKEEGINVGTKHNDCGLMIYTP 268 (347)
T ss_dssp CCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC
T ss_pred eeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHHcCCChhHCccccceEEecC
Confidence 1234455532 2 3678999999999999999999 7788888999999999999887666555555543
Q ss_pred h---------hhhHHHHHHHHHHHHHHhcCCCCceeeEEEeecccce
Q 013344 377 P---------LGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 414 (445)
Q Consensus 377 ~---------~GatG~~~i~~~l~~L~~~~~~~~~G~~~~~~G~G~~ 414 (445)
. .|++.....-.++.+|++... ++-+.+. .|+.++
T Consensus 269 ~~~~~~ggsg~~csa~v~~~~~~~~~~~g~~--~ril~~~-tGalls 312 (347)
T 3lma_A 269 DQQVFAGGSGCACSAVVTFAHIFKEIEAGRL--NRVLVVA-TGALLS 312 (347)
T ss_dssp ---------CCCCHHHHHHHTHHHHHHTTSC--SEEEEEE-EEECCC
T ss_pred CCcccCCCCccccHHHHHHHHHHHHHhcCcc--cEEEEEe-cccccC
Confidence 3 155555556666677764333 4423222 565554
No 76
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=99.77 E-value=1.8e-19 Score=186.59 Aligned_cols=104 Identities=12% Similarity=0.057 Sum_probs=85.3
Q ss_pred cEEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCC--CCC
Q 013344 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF--PET 128 (445)
Q Consensus 51 ~v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl--~~~ 128 (445)
+.||. .+|++.+|+. +..+++..+|+++|+++||+++|++|++||.|++++.+++.. .+..+..++..+|+ ..+
T Consensus 33 ~~~i~--~~~Gi~~r~~-~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~-~ps~a~~v~~~l~~~g~~~ 108 (460)
T 2wya_A 33 AGKYT--VGLGQTRMGF-CSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDK-SKAVKTVLMELFQDSGNTD 108 (460)
T ss_dssp TTCCC--CCCCCCEEEC-CCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTGGGTCCC
T ss_pred HHHHH--HhhCcEEEEE-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCchHHHHHHHHhccCCCC
Confidence 44555 5788877654 456899999999999999999999999999999999998876 34445555556754 235
Q ss_pred CceEEecCcCcHHHHHHHHHHHHHHcCCCC
Q 013344 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYD 158 (445)
Q Consensus 129 ~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~ 158 (445)
+.+++++.+|+++++||..|.++|++|.++
T Consensus 109 ~~a~D~~~aC~g~~~al~~A~~~i~~g~~~ 138 (460)
T 2wya_A 109 IEGIDTTNACYGGTASLFNAANWMESSSWD 138 (460)
T ss_dssp CBCCEEESGGGHHHHHHHHHHHHHTSTTCC
T ss_pred eeEechhhhhhhHHHHHHHHHHHHHhcccc
Confidence 789999999999999999999999999754
No 77
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.70 E-value=7.6e-17 Score=186.40 Aligned_cols=251 Identities=18% Similarity=0.219 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHHHcCC-CCCC----CC----cEEEEeccCCCc--------------------c---cchHHHHHHH-
Q 013344 75 PDDLLAPVLKAVIEKTNV-DPSE----VG----DIVVGTVLAPGS--------------------Q---RASECRMAAF- 121 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi-~~~d----Id----~vi~g~~~~~~~--------------------~---~~~~a~~~~~- 121 (445)
...|+.+++.+||+++|| +|.+ |+ ++++|+..+... + ....+..+..
T Consensus 1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A 1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence 356899999999999999 4776 55 566666543210 0 1122334444
Q ss_pred HcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc--cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHH
Q 013344 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP--KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQ 199 (445)
Q Consensus 122 ~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~--~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~ 199 (445)
.+|+ ++|+++++++|+|++.||..|++.|++|+++++.... .+.. ........|+.+++. . +.
T Consensus 1291 ~lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~--~~~~~f~~m~als~~--------~---~e 1355 (1887)
T 2uv8_A 1291 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE--EGSFEFGNMKATSNT--------L---EE 1355 (1887)
T ss_dssp TTCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--HHHHHHHHTTCBCCH--------H---HH
T ss_pred HcCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCCh--HHHHHHHHhhhhccc--------h---hh
Confidence 4888 5799999999999999999999999999999981100 0000 000000011111100 0 00
Q ss_pred HHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCC
Q 013344 200 AAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSD 279 (445)
Q Consensus 200 ~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~D 279 (445)
++ .| .++++. ++| |+. ..+....+|
T Consensus 1356 ~~------------~g-------------------------~~p~~~------------~RP-fd~-----~r~Gfv~gE 1380 (1887)
T 2uv8_A 1356 FE------------HG-------------------------RTPAEM------------SRP-ATT-----TRNGFMEAQ 1380 (1887)
T ss_dssp HH------------TT-------------------------CCGGGS------------CCT-TBT-----TCCSBCBBC
T ss_pred hc------------cc-------------------------CCCccC------------cCC-Ccc-----cCCCccccc
Confidence 00 00 012222 334 322 122233799
Q ss_pred CCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecCCC-----CC-Cc-----------------------------------
Q 013344 280 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-----IM-GV----------------------------------- 318 (445)
Q Consensus 280 GAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~p~-----~~-~~----------------------------------- 318 (445)
|++++||++.+.|.++|.++++.+.++++...... .. |.
T Consensus 1381 Gag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~~~i~ 1460 (1887)
T 2uv8_A 1381 GAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIK 1460 (1887)
T ss_dssp EEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998887643211 10 00
Q ss_pred -------------------------c-------------------------------HHHHHHHHHHHcCCCCCCccEEE
Q 013344 319 -------------------------G-------------------------------PAVAIPAAVKSAGLQLDDIDLFE 342 (445)
Q Consensus 319 -------------------------~-------------------------------~~~ai~~aL~~aGl~~~DID~~e 342 (445)
. ...+++++|+++||+++||||++
T Consensus 1461 ~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DId~ve 1540 (1887)
T 2uv8_A 1461 DWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVAS 1540 (1887)
T ss_dssp HHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGEEEEE
T ss_pred HHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHceEEE
Confidence 0 02689999999999999999999
Q ss_pred ecCCChHHHH--------HHHHHcCCCC-CCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 343 INEAFASQFV--------YCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 343 ~h~~~~~~~~--------~~~e~LGl~~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
+|.+++.... .....+|-.. .++....-+-.+|||.|++|+.+++.++..|++
T Consensus 1541 aHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~ 1602 (1887)
T 2uv8_A 1541 FHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNS 1602 (1887)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTT
T ss_pred ecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHh
Confidence 9999986421 1222334443 234333223336999999999999999999986
No 78
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.69 E-value=1.3e-15 Score=175.95 Aligned_cols=249 Identities=19% Similarity=0.254 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHcCCC-CCC----CC----cEEEEeccCCC--------------------cccc---hHHHHHHH-H
Q 013344 76 DDLLAPVLKAVIEKTNVD-PSE----VG----DIVVGTVLAPG--------------------SQRA---SECRMAAF-Y 122 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~-~~d----Id----~vi~g~~~~~~--------------------~~~~---~~a~~~~~-~ 122 (445)
..|+.+++.+||+++||+ |.+ |+ ++++|+..++. .++. ..+..+.. .
T Consensus 1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence 568999999999999997 766 44 57777765431 0011 12334444 4
Q ss_pred cCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc--cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHH
Q 013344 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP--KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQA 200 (445)
Q Consensus 123 lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~--~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~ 200 (445)
+|+ ++|+++++++|+|++.||..|++.|++|+++++.... .+.. ........|+.+++. .|++
T Consensus 1267 lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~--~~~~~f~~m~als~~-----------~de~ 1331 (1878)
T 2uv9_A 1267 LSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQE--EGSYEFANMGATSNA-----------KEEF 1331 (1878)
T ss_dssp CCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCH--HHHHHHHHHTCBCCH-----------HHHH
T ss_pred cCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCCh--HHHHHHHHhhhhccc-----------hhhh
Confidence 788 5799999999999999999999999999999981100 0000 000000001111100 0111
Q ss_pred HHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCC
Q 013344 201 AVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDG 280 (445)
Q Consensus 201 a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DG 280 (445)
+ .| .++++. ++| |+. ..+....+||
T Consensus 1332 a------------~g-------------------------~~p~~~------------~RP-fd~-----~r~Gfv~gEG 1356 (1878)
T 2uv9_A 1332 A------------RG-------------------------REPGEM------------SRP-TST-----TRNGFMESQG 1356 (1878)
T ss_dssp T------------TT-------------------------CCTTSS------------CCS-SBT-----TCCCBCBBCE
T ss_pred h------------cC-------------------------CCcccC------------cCC-Ccc-----CCCCCcccce
Confidence 1 00 112232 333 322 2233347999
Q ss_pred CeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC-----CCCCCccH-----------------------------------
Q 013344 281 AGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGP----------------------------------- 320 (445)
Q Consensus 281 AaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~-----p~~~~~~~----------------------------------- 320 (445)
++++||++.+.|.++|.++++.+.++++.... |.. +.+.
T Consensus 1357 ag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paP-g~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~ 1435 (1878)
T 2uv9_A 1357 CGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAP-GQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQW 1435 (1878)
T ss_dssp EEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCC-CSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCC-CcchhhhhhhccccCCCcccchHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999988875421 111 1110
Q ss_pred ----------------------------------------------------------------HHHHHHHHHHcCCCCC
Q 013344 321 ----------------------------------------------------------------AVAIPAAVKSAGLQLD 336 (445)
Q Consensus 321 ----------------------------------------------------------------~~ai~~aL~~aGl~~~ 336 (445)
..+++++|+++||+++
T Consensus 1436 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~ 1515 (1878)
T 2uv9_A 1436 KESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTID 1515 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGG
T ss_pred hhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHH
Confidence 1689999999999999
Q ss_pred CccEEEecCCChHHHH--------HHHHHcCCCCC-CcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 337 DIDLFEINEAFASQFV--------YCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 337 DID~~e~h~~~~~~~~--------~~~e~LGl~~~-~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
||||+++|.+++.... .....++-... ++...--+-.+|||.|++|+.+++.++..|++
T Consensus 1516 DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~ 1583 (1878)
T 2uv9_A 1516 DLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNT 1583 (1878)
T ss_dssp GEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTT
T ss_pred HeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhc
Confidence 9999999999986421 22223343322 23322222236999999999999999999986
No 79
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.7e-16 Score=178.28 Aligned_cols=251 Identities=19% Similarity=0.243 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHHHHHcCCC-CCC----CC----cEEEEeccCCCcc-----------------------cchHHHHHHH-
Q 013344 75 PDDLLAPVLKAVIEKTNVD-PSE----VG----DIVVGTVLAPGSQ-----------------------RASECRMAAF- 121 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~-~~d----Id----~vi~g~~~~~~~~-----------------------~~~~a~~~~~- 121 (445)
...|+.+++.+||++|||+ |.+ |+ ++++|+..++... ....+..++.
T Consensus 1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A 1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence 3579999999999999997 655 33 5666665444210 0112333444
Q ss_pred HcCCCCCCceEEecCcCcHHHHHHHHHHHHHHcCCCCeEecCc--cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHH
Q 013344 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNP--KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQ 199 (445)
Q Consensus 122 ~lGl~~~~~~~~v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~--~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~ 199 (445)
.+|+ ++|+++++++|+|++.||..|++.|++|+++++.... .+.. ........|+.++. +
T Consensus 1092 ~LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp--~~~~~Fa~mgaLS~--------~------ 1153 (1688)
T 2pff_A 1092 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE--EGSFEFGNMKATSN--------T------ 1153 (1688)
T ss_dssp SCCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCT--TTTTTTTTTSCSCC--------T------
T ss_pred HcCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCH--HHHHHHHhcccccc--------C------
Confidence 5787 5799999999999999999999999999999981110 0000 00000000000000 0
Q ss_pred HHHHHHHHHHHHHHcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCC
Q 013344 200 AAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSD 279 (445)
Q Consensus 200 ~a~~s~~~A~~a~~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~D 279 (445)
.+|+ ..| .++++. ++| |+. ..+...++|
T Consensus 1154 ------------------~~e~----------a~G------~~Pd~~------------cRP-Fd~-----~rdGfv~GE 1181 (1688)
T 2pff_A 1154 ------------------LEEF----------EHG------RTPAEM------------SRP-ATT-----TRNGFMEAQ 1181 (1688)
T ss_dssp ------------------TTTT----------TSS------CCSSSS------------CCS-SSS-----SCCCCCCCS
T ss_pred ------------------hhhh----------hcC------CChhhc------------cCc-Ccc-----CCCCCcccc
Confidence 0000 000 011222 344 322 123334899
Q ss_pred CCeeEEeeCHHHHHhcCCCeeEEEEEeEEeecC-------CCCCCc----------------------------------
Q 013344 280 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-------PAIMGV---------------------------------- 318 (445)
Q Consensus 280 GAaAvvL~s~~~a~~~g~~~~~~i~~~~~~~~~-------p~~~~~---------------------------------- 318 (445)
|++++||++.+.|.++|.++++.+.+++..... |. .|.
T Consensus 1182 GAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg-~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i 1260 (1688)
T 2pff_A 1182 GAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPG-KGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQI 1260 (1688)
T ss_dssp CCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCC-SSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHH
T ss_pred ceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCC-CCccchhhhcccccCCCCcccChHHHHHHHHHHHHHH
Confidence 999999999999999999999998887654321 21 111
Q ss_pred --------------------------c-------------------------------HHHHHHHHHHHcCCCCCCccEE
Q 013344 319 --------------------------G-------------------------------PAVAIPAAVKSAGLQLDDIDLF 341 (445)
Q Consensus 319 --------------------------~-------------------------------~~~ai~~aL~~aGl~~~DID~~ 341 (445)
. ...+++++|+++||+++|||++
T Consensus 1261 ~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyV 1340 (1688)
T 2pff_A 1261 KDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVA 1340 (1688)
T ss_dssp HHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCC
T ss_pred HHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEE
Confidence 0 0367899999999999999999
Q ss_pred EecCCChHHH----H-HHHHH---cCCCC-CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 342 EINEAFASQF----V-YCRNK---LGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 342 e~h~~~~~~~----~-~~~e~---LGl~~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
++|.+++... . .+.+. ++-.. .++...--+-.+|||.|++|+.+++.++.+|++.
T Consensus 1341 EaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G 1404 (1688)
T 2pff_A 1341 SFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSG 1404 (1688)
T ss_dssp CCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTC
T ss_pred EEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcC
Confidence 9998887431 1 11222 23322 1232221222369999999999999999999863
No 80
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.62 E-value=2.8e-15 Score=181.29 Aligned_cols=238 Identities=20% Similarity=0.223 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC----cEEEEeccCCCcc------------------cchHHHHHHHHcCCCCCCceEE
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ------------------RASECRMAAFYAGFPETVPVRT 133 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId----~vi~g~~~~~~~~------------------~~~~a~~~~~~lGl~~~~~~~~ 133 (445)
..|+.+++.+||++||+++++++ +|++|+...++.. ....+..++..+|+ ++|+++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 46899999999999999987665 6888876544310 12356778889999 699999
Q ss_pred ecCcCcHHHHHHHHHHHHHHcCCCCeEecCc-cchhhhhhhccccchhHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 013344 134 VNRQCSSGLQAVADVAAAIKAGFYDIGSVNP-KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212 (445)
Q Consensus 134 v~~~CsSgl~Al~~A~~~I~sG~~~~v~~~~-~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~s~~~A~~a~ 212 (445)
|+++|+|++.||.+|++.|++|++|.+-... .+. ++....-.+..
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~------------------------~~p~~~~~~~~---------- 202 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVL------------------------LKPNSSLQFMK---------- 202 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECC------------------------CCHHHHHHHHH----------
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccc------------------------cCHHHHHHHcc----------
Confidence 9999999999999999999999999981100 000 00000011110
Q ss_pred HcCCcccccccceecccCCCCCCCCCeeeccCCCCCCCCCHHHHhcCCCcccCCCccccCCCCCCCCCCeeEEeeCHHHH
Q 013344 213 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 292 (445)
Q Consensus 213 ~ag~~~~ei~pv~~~~~~~~~g~~~~~~v~~d~~~r~~~t~e~l~~~~p~~~~~G~~t~~~~~~~~DGAaAvvL~s~~~a 292 (445)
. -.+++|..+ +| |+. ..|....+||++++||.+.+.|
T Consensus 203 -~------------------------~~ls~~g~c------------~~-Fd~-----~adG~~~gEG~~~~vLk~l~~A 239 (2512)
T 2vz8_A 203 -L------------------------GMLSQDGTC------------RS-FDA-----EGTGYCRAEAVVAVLLTKKSLA 239 (2512)
T ss_dssp -T------------------------TCBCTTCSC------------CS-SST-----TCCCBCBBCEEEEEEEEEGGGC
T ss_pred -C------------------------CCCCCCCCC------------CC-CCC-----CCCCcceeeeEEEEEEEEHHHC
Confidence 0 123444333 33 443 1223337999999999998887
Q ss_pred HhcCCCeeEEEEEeEEeecCCC------CCCccHHHHHHHHHHHcCCCCCCccEEEecCCChHHH-----HHHHHHcCCC
Q 013344 293 MRKGLPILGVFRTFAAVGVDPA------IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-----VYCRNKLGLD 361 (445)
Q Consensus 293 ~~~g~~~~~~i~~~~~~~~~p~------~~~~~~~~ai~~aL~~aGl~~~DID~~e~h~~~~~~~-----~~~~e~LGl~ 361 (445)
+ ++++.+.+++....... ..+.+...+|+++|+++|++|+||||+|.|...+... ..+.+.+|-.
T Consensus 240 ~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~~E~~al~~~f~~~ 315 (2512)
T 2vz8_A 240 R----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGIVNALCAT 315 (2512)
T ss_dssp S----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHHHHHHHHHHHHCSC
T ss_pred C----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCHHHHHHHHHHhccc
Confidence 5 58899999887643211 1234557899999999999999999999999887643 2344556633
Q ss_pred C-CCcCCCCChhcccChhhhHHHHHHHHHHHHHHhc
Q 013344 362 P-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 396 (445)
Q Consensus 362 ~-~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~~ 396 (445)
. .++....-+-.+||..|++|+..++.++..|+++
T Consensus 316 ~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~ 351 (2512)
T 2vz8_A 316 RREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHG 351 (2512)
T ss_dssp SSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTT
T ss_pred CCCCceeecccccccccccccchhHHHHHHHHHHCC
Confidence 2 2333333344589999999999999999999764
No 81
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=93.10 E-value=0.18 Score=49.18 Aligned_cols=78 Identities=21% Similarity=0.248 Sum_probs=52.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h-----~~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|++++|||++.+. .........+.++||+.+.... . + ..|++|...-+.....+.+
T Consensus 67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~a~-d-----i--~~~C~g~~~aL~~A~~~i~ 138 (350)
T 4ewp_A 67 VGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAPAY-D-----V--SAACAGYCYGVAQADALVR 138 (350)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSCEE-E-----E--ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCceEE-E-----e--ecchhhHHHHHHHhhhhhh
Confidence 489999999999999999988763 2234556788899999764321 1 1 1367776666666666666
Q ss_pred cCCCCceeeEEE
Q 013344 396 RGRDCRFGVISM 407 (445)
Q Consensus 396 ~~~~~~~G~~~~ 407 (445)
.+.. ++.+++.
T Consensus 139 ~g~~-~~~Lvv~ 149 (350)
T 4ewp_A 139 SGTA-RHVLVVG 149 (350)
T ss_dssp TTSC-SEEEEEE
T ss_pred CCCc-cceeEee
Confidence 6553 5555443
No 82
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=88.71 E-value=0.79 Score=45.35 Aligned_cols=43 Identities=21% Similarity=0.123 Sum_probs=34.9
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK 364 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~ 364 (445)
.|++++|+++|++++|||++.+--. .......+.++||+.+..
T Consensus 87 ~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~ 133 (379)
T 3euo_A 87 EASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 133 (379)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCe
Confidence 7999999999999999999887432 334567888999998764
No 83
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=88.50 E-value=0.88 Score=45.65 Aligned_cols=43 Identities=28% Similarity=0.325 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-. ........+.+.||++++
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~ 188 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGD 188 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCCC
Confidence 3899999999999999999988732 223456688899999874
No 84
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=87.25 E-value=1.1 Score=45.79 Aligned_cols=44 Identities=20% Similarity=0.121 Sum_probs=35.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK 364 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~ 364 (445)
..|++++|+++|++++|||++.+--. .......+.++||+.+..
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~ 162 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 162 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCe
Confidence 37999999999999999999987432 334567888999998754
No 85
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=86.42 E-value=1.1 Score=44.46 Aligned_cols=70 Identities=19% Similarity=0.162 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|++++|+++|++++|||++.+-.. .......+.+.||+++.. .... ..|++|....+.....+.
T Consensus 101 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~--------~~~C~~~~~al~~A~~~i 172 (387)
T 3oit_A 101 AEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLH--------LNGCFAGCAALRLAKDLA 172 (387)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEE--------CCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEE--------CchhHHHHHHHHHHHHHH
Confidence 37999999999999999999887422 233456788899998753 2211 135555555555555555
Q ss_pred hcCC
Q 013344 395 RRGR 398 (445)
Q Consensus 395 ~~~~ 398 (445)
+.+.
T Consensus 173 ~sg~ 176 (387)
T 3oit_A 173 ENSR 176 (387)
T ss_dssp HSST
T ss_pred hcCC
Confidence 5443
No 86
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=86.39 E-value=1.2 Score=44.23 Aligned_cols=44 Identities=18% Similarity=0.083 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK 364 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~~ 364 (445)
..|++++|+++|++++|||++.+--. .......+.+.||++...
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~ 154 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTV 154 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCc
Confidence 37999999999999999999887322 234566788999998754
No 87
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=85.74 E-value=1.7 Score=42.45 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||.+.+-.. .......+.+.||+++
T Consensus 71 ~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~ 117 (354)
T 4efi_A 71 RKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPA 117 (354)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCC
Confidence 48999999999999999999887422 2335677889999964
No 88
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=85.51 E-value=1.6 Score=42.03 Aligned_cols=42 Identities=14% Similarity=0.223 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||.+.+-.. .......+.+.||+++
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~ 103 (321)
T 3il6_A 57 HQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE 103 (321)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC
Confidence 47999999999999999999887422 2335677888999975
No 89
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=85.37 E-value=1.8 Score=42.34 Aligned_cols=42 Identities=36% Similarity=0.395 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||++.+-.. .......+.+.||++.
T Consensus 79 ~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~~ 125 (359)
T 3h78_A 79 VPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRH 125 (359)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCCS
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCC
Confidence 48999999999999999999887422 2334678888999963
No 90
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=85.28 E-value=1.8 Score=41.65 Aligned_cols=41 Identities=22% Similarity=0.326 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLD 361 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~ 361 (445)
..|++++|+++|++++|||.+.+-.. .......+.+.||++
T Consensus 63 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~ 108 (323)
T 3il3_A 63 FEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID 108 (323)
T ss_dssp HHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC
Confidence 48999999999999999999887321 233466788899995
No 91
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=84.96 E-value=1.5 Score=43.58 Aligned_cols=69 Identities=17% Similarity=0.150 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..|++++|+++|++++|||++.+-. ........+.+.||+.. + ++--..+++|....+....++.+
T Consensus 122 ~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~~-~--------~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 122 VTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLGG-F--------AFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCCS-E--------EEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCCC-e--------EEEECCccHHHHHHHHHHHHHHH
Confidence 4799999999999999999988732 22334567788999932 1 11112355655555555555555
Q ss_pred cCC
Q 013344 396 RGR 398 (445)
Q Consensus 396 ~~~ 398 (445)
.+.
T Consensus 193 ~g~ 195 (392)
T 3led_A 193 GGS 195 (392)
T ss_dssp TTS
T ss_pred CCC
Confidence 443
No 92
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=84.82 E-value=2.6 Score=40.81 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~-----~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||.+.+-... ......+.+.||+++.
T Consensus 73 ~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~ 120 (345)
T 3s21_A 73 TQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDH 120 (345)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCC
Confidence 489999999999999999998764221 2346678888999753
No 93
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=84.64 E-value=2.4 Score=47.13 Aligned_cols=77 Identities=16% Similarity=0.114 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCCC--cCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h----~~~~~~~~~~~e~LGl~~~~--vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..|+++||+++|++++|||++.+- .........+.+.||+.... ..... .+++|....+....++.
T Consensus 694 ~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~--------~aCsg~~~Al~~A~~~i 765 (979)
T 3tsy_A 694 KEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYH--------QGCYAGGTVLRTAKDLA 765 (979)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEES--------CCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeec--------cccHhHHHHHHHHHHHH
Confidence 368999999999999999998863 22334566788899997644 22111 24444444444445555
Q ss_pred hcCCCCceeeEE
Q 013344 395 RRGRDCRFGVIS 406 (445)
Q Consensus 395 ~~~~~~~~G~~~ 406 (445)
+.+.. +..+++
T Consensus 766 ~sG~~-~~vLvv 776 (979)
T 3tsy_A 766 ENNAG-ARVLVV 776 (979)
T ss_dssp HTSTT-CEEEEE
T ss_pred HhCCC-CEEEEE
Confidence 55442 554443
No 94
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=84.57 E-value=1.9 Score=42.96 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-. .+......+.+.||++..
T Consensus 120 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 166 (402)
T 3awk_A 120 KEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLGLRPT 166 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcCCCCc
Confidence 3799999999999999999887632 233456778889999764
No 95
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=84.37 E-value=2.1 Score=41.20 Aligned_cols=43 Identities=28% Similarity=0.430 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||.+.+-.. .......+.+.||+++.
T Consensus 70 ~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~ 117 (333)
T 4dfe_A 70 FIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNH 117 (333)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCC
Confidence 48999999999999999999876322 23346678889999543
No 96
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=83.86 E-value=1.9 Score=42.31 Aligned_cols=43 Identities=12% Similarity=0.218 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||.+.+-. ........+.+.||+++.
T Consensus 85 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~ 132 (365)
T 3gwa_A 85 YEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTH 132 (365)
T ss_dssp HHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCC
Confidence 4899999999999999999987731 123345678889999843
No 97
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=83.36 E-value=2.3 Score=42.00 Aligned_cols=43 Identities=21% Similarity=0.152 Sum_probs=33.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-. .+......+.+.||++..
T Consensus 107 ~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 153 (389)
T 1i88_A 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPY 153 (389)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcCcCCC
Confidence 3799999999999999999987632 233456678889999764
No 98
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=83.29 E-value=2.1 Score=42.69 Aligned_cols=43 Identities=21% Similarity=0.214 Sum_probs=33.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-. .+......+.+.||++..
T Consensus 125 ~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LGl~~~ 171 (413)
T 2p0u_A 125 KEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPN 171 (413)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhCCCCC
Confidence 3799999999999999999988632 233445688889999764
No 99
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=83.26 E-value=1.9 Score=42.68 Aligned_cols=43 Identities=21% Similarity=0.130 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-.. +......+.+.||++..
T Consensus 103 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 149 (387)
T 3a5r_A 103 KEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPS 149 (387)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCC
Confidence 37999999999999999998876322 22345678889999764
No 100
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=83.20 E-value=2 Score=42.69 Aligned_cols=43 Identities=21% Similarity=0.180 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-.. +......+.+.||++..
T Consensus 112 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 158 (402)
T 1ee0_A 112 KEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPS 158 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcCcCCC
Confidence 37999999999999999998876422 23346678889999764
No 101
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=82.85 E-value=3.3 Score=40.91 Aligned_cols=68 Identities=18% Similarity=0.197 Sum_probs=45.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++|++++|||.+.+-.. .......+...||+++.....+. +...+++...+..+...++
T Consensus 34 ~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v------~~~Css~~~al~~A~~~I~ 106 (395)
T 4e1l_A 34 TIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTV------NKLCGSGLKSVQLAAQSIT 106 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEEE------CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceEEEc------cccchHHHHHHHHHHHHHh
Confidence 48999999999999999998877422 12345667788999754222222 3345566666666665555
No 102
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=82.12 E-value=2.5 Score=41.19 Aligned_cols=41 Identities=22% Similarity=0.367 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC--hHHHHHHHHHcCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLD 361 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~--~~~~~~~~e~LGl~ 361 (445)
..|++++|+++|++++|||++.+-... ......+.+.||++
T Consensus 60 ~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~~A~~va~~Lgip 102 (347)
T 3lma_A 60 EDAVQSALSKQNLKKEDIDIFLAGDLLNQNVTANYVARHLKIP 102 (347)
T ss_dssp HHHHHHHHHTTTCCGGGCSEEEEEESSSSSTTHHHHHHHHCCC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCchhHHHHHHHHhCCC
Confidence 489999999999999999999874321 11344566778665
No 103
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=82.12 E-value=4.1 Score=40.31 Aligned_cols=69 Identities=19% Similarity=0.071 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+++++|+++|++++|||.+.+-.. .......+...||+++.....+. +...+++...+..+...++.
T Consensus 36 ~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v------~~aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 36 VTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTI------NIVCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEE------CCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceEEEe------ccccHHHHHHHHHHHHHHhc
Confidence 48999999999999999999887422 12345677788999753222222 23355666566666665553
No 104
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=81.77 E-value=2.7 Score=41.10 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC------ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA------FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~------~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++|++++|||++.+-.. .......+.+.||+..
T Consensus 59 ~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~ 106 (357)
T 3s3l_A 59 ARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRH 106 (357)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCC
Confidence 48999999999999999999887432 1123567778899853
No 105
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=81.63 E-value=2.5 Score=41.98 Aligned_cols=43 Identities=21% Similarity=0.255 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-.. +......+.+.||++..
T Consensus 120 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 166 (406)
T 2d3m_A 120 TEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLGLHAN 166 (406)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCcCCC
Confidence 37999999999999999999876322 22345678889999764
No 106
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=80.87 E-value=2.3 Score=42.54 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||++.+-.. +......+.+.||++..
T Consensus 130 ~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 176 (413)
T 1xes_A 130 KEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPS 176 (413)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCc
Confidence 37999999999999999998875322 23345678889999764
No 107
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=79.39 E-value=3.2 Score=40.53 Aligned_cols=42 Identities=21% Similarity=0.110 Sum_probs=32.6
Q ss_pred HHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~ 363 (445)
.|++++|+++|++++|||.+.+-. ........+.+.||+...
T Consensus 101 ~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 146 (374)
T 2h84_A 101 QACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKD 146 (374)
T ss_dssp HHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCC
Confidence 799999999999999999987521 223345677888999763
No 108
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=78.31 E-value=4.9 Score=39.71 Aligned_cols=69 Identities=12% Similarity=0.159 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~-----~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+++++|+++|++++|||.+.+-... ......+...||++......+. +...+++...+..+...++.
T Consensus 34 ~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~~v------~~aCss~~~al~~A~~~I~~ 107 (394)
T 3ss6_A 34 VPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTI------QRQCSSGMQAIMSAAMQIQL 107 (394)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEEEE------ECGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEEEe------cCcchHHHHHHHHHHHHHhC
Confidence 489999999999999999998774321 1245567788999753222221 23345565556555555543
No 109
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=77.80 E-value=4.5 Score=39.76 Aligned_cols=43 Identities=26% Similarity=0.350 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~----~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||.+.+-.. +......+.+.||+...
T Consensus 89 ~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 135 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDST 135 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCC
Confidence 37999999999999999999876322 23345678889999763
No 110
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=74.89 E-value=5.8 Score=40.11 Aligned_cols=41 Identities=7% Similarity=0.056 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLD 361 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h-----~~~~~~~~~~~e~LGl~ 361 (445)
..|++++|+++|++++|||++++- +.+......+.+.||+.
T Consensus 59 ~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~ 104 (460)
T 2wya_A 59 LTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDS 104 (460)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGG
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhcc
Confidence 489999999999999999998862 34555666777778754
No 111
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=74.24 E-value=5.7 Score=39.16 Aligned_cols=43 Identities=19% Similarity=0.185 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 363 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~----~~~~~~~~~~e~LGl~~~ 363 (445)
..|++++|+++|++++|||.+.+-. ........+.+.||+...
T Consensus 118 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 164 (393)
T 1ted_A 118 VDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPS 164 (393)
T ss_dssp HHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCC
Confidence 3799999999999999999987521 223345678889999764
No 112
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=74.20 E-value=2.9 Score=38.29 Aligned_cols=58 Identities=12% Similarity=0.166 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHH--HcCCCCCCceEEecC
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAF--YAGFPETVPVRTVNR 136 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~--~lGl~~~~~~~~v~~ 136 (445)
.+....+++++|+++|++++|||.|+++.- |..+.|.-.+...+. .+++ ++|.+.|+.
T Consensus 35 ~~~l~~~i~~~L~~a~~~~~did~Iav~~G-PGsftglRig~~~ak~la~~~--~~Pl~~V~~ 94 (231)
T 2gel_A 35 TQRILPMVQEILAASGASLNEIDALAFGRG-PGSFTGVRIGIGIAQGLALGA--NLPMIGVST 94 (231)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEECC-SSCHHHHHHHHHHHHHHHHTT--TCCEEEECH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcC-CChhHhHHHHHHHHHHHHHHc--CCCEEEecc
Confidence 455678999999999999999999999763 322211111112222 3344 467777764
No 113
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=73.16 E-value=9 Score=37.69 Aligned_cols=68 Identities=7% Similarity=-0.093 Sum_probs=42.8
Q ss_pred HHHHHHHHHHc-CCCCCCccEEEecCC------ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSA-GLQLDDIDLFEINEA------FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 393 (445)
Q Consensus 321 ~~ai~~aL~~a-Gl~~~DID~~e~h~~------~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L 393 (445)
..+++++|+++ |++++|||.+.+-.. .......+...+|++......+. +...++|...+..+...+
T Consensus 32 ~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v------~~aCss~l~Al~~A~~~I 105 (387)
T 3goa_A 32 AHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTV------NRLCGSSMQALHDAARMI 105 (387)
T ss_dssp HHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEE------ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEe------cCcchHHHHHHHHHHHHH
Confidence 48999999999 999999998876321 22345566777898643221222 223445555555555555
Q ss_pred H
Q 013344 394 K 394 (445)
Q Consensus 394 ~ 394 (445)
+
T Consensus 106 ~ 106 (387)
T 3goa_A 106 M 106 (387)
T ss_dssp H
T ss_pred h
Confidence 4
No 114
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=72.94 E-value=7.3 Score=36.74 Aligned_cols=68 Identities=19% Similarity=0.167 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+++++|+++|++++|||.+.+-.. .......+.+.||+...+.. +. ....++|...+..+...++.
T Consensus 56 ~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~~~~~-~v------~~aCas~~~al~~A~~~i~~ 128 (313)
T 1zow_A 56 YEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVASM-DQ------LAACSGFMYSMITAKQYVQS 128 (313)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCSCCEE-EE------ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCcEE-EE------CCcCHHHHHHHHHHHHHHHC
Confidence 47999999999999999998765321 22345677888999742211 11 22244555555555555543
No 115
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=72.86 E-value=7.9 Score=36.39 Aligned_cols=68 Identities=15% Similarity=0.079 Sum_probs=43.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+++++|+++|++++|||.+.+-.. .......+.+.||+...+.. +. ....++|...+..+...++.
T Consensus 55 ~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~~~~~-~v------~~~C~s~~~al~~A~~~i~~ 127 (309)
T 2ebd_A 55 TQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVYAF-DI------SAACSGFIYALDIADSFIKS 127 (309)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTTCEEE-EE------ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCceEE-ec------CccchHHHHHHHHHHHHHHC
Confidence 47999999999999999998776322 22245677888999763211 11 12244555555555555543
No 116
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=72.84 E-value=3.2 Score=37.59 Aligned_cols=30 Identities=10% Similarity=0.337 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEec
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTV 105 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~ 105 (445)
.+.....++++|+++|++++|||.|.++.-
T Consensus 36 s~~L~p~i~~~L~~a~~~~~dld~Iav~~G 65 (213)
T 3r6m_A 36 TKKVLPMVDEVLKEAGLTLQDLDALAFGRG 65 (213)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEEecC
Confidence 445567899999999999999999999764
No 117
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=71.65 E-value=5.4 Score=40.27 Aligned_cols=40 Identities=10% Similarity=0.067 Sum_probs=31.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGL 360 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~~~~~~~~~~e~LGl 360 (445)
..|++++|+++|++++|||++.+-- .+......+.+.||+
T Consensus 57 ~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl 101 (450)
T 2f82_A 57 FNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEK 101 (450)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHT
T ss_pred HHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCC
Confidence 4899999999999999999998632 233456677788888
No 118
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=71.55 E-value=10 Score=35.81 Aligned_cols=68 Identities=19% Similarity=0.154 Sum_probs=42.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+++++|+++|++++|||.+.+-. ........+.+.||+...+.. +. ....++|...+..+...++.
T Consensus 56 ~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~~~-~v------~~aCas~~~al~~A~~~i~~ 128 (317)
T 1hnj_A 56 FEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAF-DV------AAACAGFTYALSVADQYVKS 128 (317)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSCEE-EE------CCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCeEE-ee------CcccHHHHHHHHHHHHHHHC
Confidence 4799999999999999999866521 122345677888999743221 11 22234444445555555543
No 119
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=71.40 E-value=5.2 Score=40.58 Aligned_cols=41 Identities=7% Similarity=0.056 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLD 361 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h-----~~~~~~~~~~~e~LGl~ 361 (445)
..|++++|+++|++++|||++.+- +.+......+.+.||++
T Consensus 59 ~~Aa~~AL~~agi~~~dId~IivaT~t~~~~~ps~A~~v~~~LGl~ 104 (460)
T 2v4w_A 59 LTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDS 104 (460)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGG
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCC
Confidence 489999999999999999999873 22344566788899984
No 120
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=70.98 E-value=6 Score=37.59 Aligned_cols=40 Identities=15% Similarity=0.269 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGL 360 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl 360 (445)
..+++++|+++|++++|||.+.+-.. .......+.+.||+
T Consensus 55 ~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl 99 (322)
T 1ub7_A 55 FKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL 99 (322)
T ss_dssp HHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC
Confidence 47999999999999999997664211 12245677888999
No 121
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=70.85 E-value=3.2 Score=41.34 Aligned_cols=69 Identities=12% Similarity=0.022 Sum_probs=41.8
Q ss_pred HHHHHHHHHH-cCCCCCCccEEEecCCC------hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKS-AGLQLDDIDLFEINEAF------ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 393 (445)
Q Consensus 321 ~~ai~~aL~~-aGl~~~DID~~e~h~~~------~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L 393 (445)
..+++++|++ +||+++|||.+.+-... ......+...+|++......+. +...++|...+..+...+
T Consensus 37 ~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v------~~~Css~~~Al~~A~~~I 110 (407)
T 3svk_A 37 VGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQL------NRFCASGLEAVNTAAQKV 110 (407)
T ss_dssp HHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCEEEEE------C---CBSCCHHHHHHHHH
T ss_pred HHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCceEEe------cCcChhHHHHHHHHHHHH
Confidence 4899999999 99999999988774321 2234567788999654222221 223444444555555555
Q ss_pred Hh
Q 013344 394 KR 395 (445)
Q Consensus 394 ~~ 395 (445)
+.
T Consensus 111 ~s 112 (407)
T 3svk_A 111 RS 112 (407)
T ss_dssp HH
T ss_pred Hc
Confidence 43
No 122
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=69.81 E-value=2.9 Score=37.96 Aligned_cols=59 Identities=15% Similarity=0.280 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHH--HcCCCCCCceEEecC
Q 013344 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAF--YAGFPETVPVRTVNR 136 (445)
Q Consensus 75 ~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~--~lGl~~~~~~~~v~~ 136 (445)
-.+.....++++|+++|++++|||.|.++.- |..+-|.-.+...+. .+++ ++|.+.|+.
T Consensus 45 Hse~L~p~i~~~L~~a~~~~~dld~Iav~~G-PGsfTGlRiG~~~Ak~La~~~--~iPl~gVs~ 105 (218)
T 2a6a_A 45 HAEILPVVVKKLLDELDLKVKDLDVVGVGIG-PGGLTGLRVGIATVVGLVSPY--DIPVAPLNS 105 (218)
T ss_dssp GGGHHHHHHHHHHHHHTCCGGGCSEEEEECC-SSCHHHHHHHHHHHHHHHGGG--TCCEEEECH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC-CCchHhHHHHHHHHHHHHHHc--CCCEEEeCc
Confidence 3466678899999999999999999999763 322211111222222 2333 467887764
No 123
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=69.48 E-value=9.4 Score=37.72 Aligned_cols=69 Identities=16% Similarity=0.093 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC------ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA------FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~------~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++|++++|||.+.+-.. .......+...||++......+. ....++|...+..+...++
T Consensus 31 ~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v------~~aCas~~~Al~~A~~~I~ 104 (401)
T 1ulq_A 31 AHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTV------NRLCGSGLEAVAQAARAIW 104 (401)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEE------ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCccEeec------cccchHHHHHHHHHHHHHH
Confidence 47899999999999999998766311 23445677788999643222222 2335566666666666665
Q ss_pred h
Q 013344 395 R 395 (445)
Q Consensus 395 ~ 395 (445)
.
T Consensus 105 ~ 105 (401)
T 1ulq_A 105 A 105 (401)
T ss_dssp T
T ss_pred C
Confidence 3
No 124
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=68.38 E-value=9.9 Score=36.42 Aligned_cols=42 Identities=26% Similarity=0.316 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~ 362 (445)
..+++++|+++|++++|||.+.+-.. .......+...||+..
T Consensus 65 ~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~ 111 (339)
T 1mzj_A 65 VAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADN 111 (339)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCC
Confidence 47999999999999999997765211 2224567788899974
No 125
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=66.65 E-value=11 Score=35.79 Aligned_cols=41 Identities=24% Similarity=0.230 Sum_probs=31.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLD 361 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~ 361 (445)
..+++++|+++|++++|||.+.+-.. .......+.+.||+.
T Consensus 66 ~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~ 111 (335)
T 1u6e_A 66 TEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK 111 (335)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC
Confidence 47999999999999999998876322 223456778889995
No 126
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=66.32 E-value=5.8 Score=39.62 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCC-CCceEE----e-cCcCcHHHHHHHHHH
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPE-TVPVRT----V-NRQCSSGLQAVADVA 149 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~-~~~~~~----v-~~~CsSgl~Al~~A~ 149 (445)
+-...++++||+++||+|+|||.|.. |+.++... ......+...+|.+. .++... + ...+++|+..+..+.
T Consensus 292 ~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d--~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~ 369 (427)
T 3ho9_A 292 AGAALAMANALRDAGIEASQIGYVNAHGTSTPAGD--KAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSI 369 (427)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHH--HHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcC--HHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHH
Confidence 44567899999999999999998774 33332221 122333444555431 122211 1 245689999999999
Q ss_pred HHHHcCC
Q 013344 150 AAIKAGF 156 (445)
Q Consensus 150 ~~I~sG~ 156 (445)
..++.|.
T Consensus 370 ~~l~~~~ 376 (427)
T 3ho9_A 370 LALRDQA 376 (427)
T ss_dssp HHHHHTE
T ss_pred HHHhcCC
Confidence 9999875
No 127
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=65.52 E-value=9.4 Score=38.86 Aligned_cols=39 Identities=13% Similarity=0.083 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLG 359 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LG 359 (445)
..|++++|+++|++++|||++.+.-. .......+.+.|+
T Consensus 78 ~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~ 121 (478)
T 2p8u_A 78 MTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFE 121 (478)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHh
Confidence 48999999999999999999987422 2334455554444
No 128
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=64.78 E-value=7.8 Score=37.00 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEe----cCcCcHHHHHHHHHHHHH
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAAI 152 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v----~~~CsSgl~Al~~A~~~I 152 (445)
+...++++++|+++|++++|||.++.-. .+ ......+...+|++.+....++ |..++|...+|..+ +
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~---~~---~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~ 294 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQ---AN---TRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---L 294 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC---CC---HHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC---CC---HHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---H
Confidence 4567789999999999999999887622 11 1233445668898643222222 34555666666543 4
Q ss_pred HcCC
Q 013344 153 KAGF 156 (445)
Q Consensus 153 ~sG~ 156 (445)
+.|.
T Consensus 295 ~~~~ 298 (331)
T 2x3e_A 295 RQGI 298 (331)
T ss_dssp HTTC
T ss_pred HhCC
Confidence 5554
No 129
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=62.96 E-value=16 Score=36.38 Aligned_cols=75 Identities=15% Similarity=0.141 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCCCCceEEec--------CcCcHHHHHHHH
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPVRTVN--------RQCSSGLQAVAD 147 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~--------~~CsSgl~Al~~ 147 (445)
+-...++++||+++||+|+|||.+.. |+.+ .. .......+...+|.+. .+ +.++ ..+++|+..+..
T Consensus 293 ~~~~~ai~~al~~Agl~~~dId~ve~HgtgT-~~--d~~e~~al~~~~g~~~-~~-~~v~s~k~~~GH~~gAsG~~~~i~ 367 (428)
T 3kzu_A 293 EGAQRCMVAALKRAGIVPDEIDYINAHGTST-MA--DTIELGAVERVVGEAA-AK-ISMSSTKSSIGHLLGAAGAAEAVF 367 (428)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSS-TT--HHHHHHHHHHHHGGGG-GG-CEEECTHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHeeEEEecCCcc-hh--hHHHHHHHHHHhccCC-Cc-eeeCCchhhhCCCchhhHHHHHHH
Confidence 34568899999999999999998763 3333 21 1122233333455531 11 2222 346788888889
Q ss_pred HHHHHHcCC
Q 013344 148 VAAAIKAGF 156 (445)
Q Consensus 148 A~~~I~sG~ 156 (445)
+..+++.|.
T Consensus 368 ~~~~l~~~~ 376 (428)
T 3kzu_A 368 STLAIRDNI 376 (428)
T ss_dssp HHHHHHHTE
T ss_pred HHHHhccCc
Confidence 999998875
No 130
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=61.64 E-value=19 Score=35.74 Aligned_cols=69 Identities=10% Similarity=0.107 Sum_probs=42.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~-----~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+++++|+++|++++|||.+.+-... ..........||++......+. ....++|...+..+...++.
T Consensus 60 ~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p~~~v------~~aCss~~~Al~~A~~~I~~ 133 (418)
T 2iik_A 60 SAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTV------NRQCSSGLQAVASIAGGIRN 133 (418)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEE------ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCceEEEe------CCCCHHHHHHHHHHHHHHHC
Confidence 479999999999999999977763221 1233345567898532211111 23345666666666555543
No 131
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=61.26 E-value=19 Score=36.19 Aligned_cols=69 Identities=14% Similarity=0.152 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCh------HHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAFA------SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 394 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~~------~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~ 394 (445)
..+++++|+++|++++|||.+.+-.... .....+...||++......+. ....++|...+..+...++
T Consensus 60 ~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v------~~aCaSg~~Al~~A~~~I~ 133 (442)
T 2wu9_A 60 APVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTV------NRQCSSGLQAVADVAAAIK 133 (442)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSCEEEE------ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCceEEEe------CCcCHHHHHHHHHHHHHHH
Confidence 4799999999999999999776633221 234456678999633211111 2234566666666666665
Q ss_pred h
Q 013344 395 R 395 (445)
Q Consensus 395 ~ 395 (445)
.
T Consensus 134 s 134 (442)
T 2wu9_A 134 A 134 (442)
T ss_dssp T
T ss_pred C
Confidence 3
No 132
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=61.07 E-value=8.9 Score=37.91 Aligned_cols=78 Identities=18% Similarity=0.200 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCC-CCceEE----e-cCcCcHHHHHHHHHH
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPE-TVPVRT----V-NRQCSSGLQAVADVA 149 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~-~~~~~~----v-~~~CsSgl~Al~~A~ 149 (445)
+-...++++||+++|++|+|||.|.. ++.++.+ .......+...+|.+. .++... + +..+++|+..+..+.
T Consensus 275 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~g--D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~ 352 (408)
T 1j3n_A 275 KGAALAMARALKDAGIAPEQVGYINAHGTSTPVG--DRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATV 352 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH--HHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccc--CHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHH
Confidence 44567899999999999999997764 2211110 0011233333445421 122221 1 245678999999999
Q ss_pred HHHHcCC
Q 013344 150 AAIKAGF 156 (445)
Q Consensus 150 ~~I~sG~ 156 (445)
..++.|.
T Consensus 353 l~l~~~~ 359 (408)
T 1j3n_A 353 QALYHGV 359 (408)
T ss_dssp HHHHHTE
T ss_pred HHHhcCC
Confidence 9999875
No 133
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=60.87 E-value=20 Score=35.28 Aligned_cols=69 Identities=10% Similarity=0.108 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~-----~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+++++|+++|++++|||.+.+-... ......+...||++......+. ....++|...+..+...++.
T Consensus 35 ~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v------~~aCaSg~~Ai~~A~~~I~~ 108 (397)
T 1wl4_A 35 STVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSC------QMICGSGLKAVCLAVQSIGI 108 (397)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEE------CCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCccEEEe------cCcChhHHHHHHHHHHHHHC
Confidence 479999999999999999987763221 2345566778998533222222 23456676667777666654
No 134
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=56.18 E-value=10 Score=36.37 Aligned_cols=28 Identities=18% Similarity=0.439 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEe
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGT 104 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~g~ 104 (445)
+.+..+++++|+++|++++|||.|+++.
T Consensus 49 ~~l~~~i~~~L~~agi~~~did~Ia~~~ 76 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQ 76 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 4566799999999999999999998754
No 135
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=55.68 E-value=23 Score=34.67 Aligned_cols=69 Identities=19% Similarity=0.250 Sum_probs=45.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~~-----~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+++++|+++|++++|||.+.+-... ......+...+|+.+.....+. ....++|...+..+...++.
T Consensus 32 ~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v------~~aCaSgl~Al~~A~~~I~~ 105 (392)
T 2vu1_A 32 ATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGM------NQLCGSGLRAVALGMQQIAT 105 (392)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEE------ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCceEEEe------cccchHHHHHHHHHHHHHHC
Confidence 479999999999999999987653211 2345667788999753222221 23455666667777666654
No 136
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=55.45 E-value=21 Score=34.95 Aligned_cols=69 Identities=6% Similarity=-0.073 Sum_probs=43.9
Q ss_pred HHHHHHHHHHc-CCCCCCccEEEecCCC------hHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSA-GLQLDDIDLFEINEAF------ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 393 (445)
Q Consensus 321 ~~ai~~aL~~a-Gl~~~DID~~e~h~~~------~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L 393 (445)
..+++++|+++ |++++|||.+.+-... ......+...||+++.....+. ....++|...+..+...+
T Consensus 35 ~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v------~~aCaS~~~Al~~A~~~I 108 (390)
T 1wdk_C 35 AHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTV------SRLCGSSMSALHTAAQAI 108 (390)
T ss_dssp HHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEE------ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCccEEEE------cccchhHHHHHHHHHHHH
Confidence 47999999999 9999999877663221 2344566777888643222221 234556666666666666
Q ss_pred Hh
Q 013344 394 KR 395 (445)
Q Consensus 394 ~~ 395 (445)
+.
T Consensus 109 ~~ 110 (390)
T 1wdk_C 109 MT 110 (390)
T ss_dssp HT
T ss_pred Hc
Confidence 53
No 137
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=55.04 E-value=29 Score=34.00 Aligned_cols=69 Identities=12% Similarity=0.007 Sum_probs=43.8
Q ss_pred HHHHHHHHHHcC----CCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHH
Q 013344 321 AVAIPAAVKSAG----LQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLH 391 (445)
Q Consensus 321 ~~ai~~aL~~aG----l~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~ 391 (445)
..+++++|+++| ++++|||.+.+-.. .......+...||++......+. ....++|...+..+..
T Consensus 40 ~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~v------~~aCasg~~Al~~A~~ 113 (393)
T 1afw_A 40 YNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVAL------NRQCSSGLTAVNDIAN 113 (393)
T ss_dssp HHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEE------ECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCceEEEE------cCcCHHHHHHHHHHHH
Confidence 478999999999 99999997766322 12345567778999643222221 2234566666666666
Q ss_pred HHHh
Q 013344 392 EMKR 395 (445)
Q Consensus 392 ~L~~ 395 (445)
.++.
T Consensus 114 ~I~~ 117 (393)
T 1afw_A 114 KIKV 117 (393)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 6653
No 138
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=54.57 E-value=28 Score=34.08 Aligned_cols=69 Identities=12% Similarity=0.123 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCChhcccChhhhHHHHHHHHHHHHHHh
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 395 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~~-----~~~~~~~~~e~LGl~~~~vn~~gG~la~Gh~~GatG~~~i~~~l~~L~~ 395 (445)
..+++++|+++|++++|||.+.+-.. .......+...||++......+. ....++|...+..+...++.
T Consensus 37 ~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p~~~v------~~aCaS~~~Al~~A~~~I~~ 110 (395)
T 2ib8_A 37 SIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPCTTI------NKVCASGMKAIMMASQSLMC 110 (395)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCCEEEE------ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCceEEEe------cccccHHHHHHHHHHHHHHC
Confidence 47899999999999999998765321 12234566677898533222221 22355666666666666653
No 139
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=51.63 E-value=24 Score=34.88 Aligned_cols=78 Identities=15% Similarity=0.236 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCC-CCceEEe-----cCcCcHHHHHHHHHH
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPE-TVPVRTV-----NRQCSSGLQAVADVA 149 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~-~~~~~~v-----~~~CsSgl~Al~~A~ 149 (445)
+-...++++||+++||+|+|||.|.. ++.++.. .......+...+|.+. .++...+ ....++|+..+..+.
T Consensus 283 ~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~g--D~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~ 360 (424)
T 1tqy_A 283 REMAETIRVALDESRTDATDIDYINAHGSGTRQN--DRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACV 360 (424)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHH--HHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCc--CHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHH
Confidence 34578899999999999999998774 2211110 0112223333444311 1333221 234678999999999
Q ss_pred HHHHcCC
Q 013344 150 AAIKAGF 156 (445)
Q Consensus 150 ~~I~sG~ 156 (445)
..++.|.
T Consensus 361 l~l~~~~ 367 (424)
T 1tqy_A 361 LALEHGV 367 (424)
T ss_dssp HHHHHCE
T ss_pred HHHHcCC
Confidence 9999875
No 140
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=49.04 E-value=19 Score=35.54 Aligned_cols=77 Identities=16% Similarity=0.247 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCCCCceEEe-----cCcCcHHHHHHHHHH
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPVRTV-----NRQCSSGLQAVADVA 149 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-----~~~CsSgl~Al~~A~ 149 (445)
.+-...++++||+++||+|+|||.|.. |+.++.. .......+...+|- ..+...+ ....++|+..+..+.
T Consensus 278 ~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~--D~~E~~al~~~~~~--~~~v~s~K~~~GH~~gAsG~~~~~~~~ 353 (412)
T 4ewg_A 278 ASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRG--DVAESQATARTFGE--RMPISSLKSYVGHTLGACGALEAWWTI 353 (412)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHH--HHHHHHHHHHHHCT--TCEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccc--cHHHHHHHHHHcCC--CCeeeCccccccccHHHHHHHHHHHHH
Confidence 456678999999999999999998774 2222111 11223333334442 2332221 134678888888889
Q ss_pred HHHHcCC
Q 013344 150 AAIKAGF 156 (445)
Q Consensus 150 ~~I~sG~ 156 (445)
..++.|.
T Consensus 354 ~~l~~~~ 360 (412)
T 4ewg_A 354 EMMKRNW 360 (412)
T ss_dssp HHHHHTE
T ss_pred HHHhcCC
Confidence 9998875
No 141
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=49.04 E-value=8.2 Score=37.27 Aligned_cols=29 Identities=14% Similarity=0.320 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEe
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId~vi~g~ 104 (445)
.+....+++++|+++|++++|||.|.++.
T Consensus 53 ~~~l~~~i~~~L~~ag~~~~did~Iav~~ 81 (334)
T 3eno_A 53 SEVIDTVISRALEKAKISIHDIDLIGFSM 81 (334)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 34667899999999999999999999864
No 142
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=48.82 E-value=19 Score=30.17 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=37.2
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecC
Q 013344 82 VLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNR 136 (445)
Q Consensus 82 Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~ 136 (445)
-..+.+++.+|+++||-.|+| ++++|.. ..+|+..+- .+|+. .+|.+....
T Consensus 56 Ll~eii~~N~l~~eDIvSv~F-TvT~DL~-A~FPA~aaR-~~Gw~-~VPLmc~qE 106 (148)
T 1xho_A 56 LLKEMAEKNGLEEDDIISIIF-TVTKDLD-AAFPAIAAR-NMGWT-STALMCMNE 106 (148)
T ss_dssp HHHHHHHHTTCCGGGEEEEEE-EECTTCC-SSCTHHHHH-HTTCT-TSEEEEEEC
T ss_pred HHHHHHHHcCCCHHHEEEEEE-EeCCccC-ccChHHHHH-HcCCC-ccchhhccc
Confidence 345556788999999988888 5677765 567887665 45995 688887553
No 143
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=48.40 E-value=44 Score=34.21 Aligned_cols=77 Identities=6% Similarity=0.015 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCc-eEEec--------CcCcHHHHHHHHH
Q 013344 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVN--------RQCSSGLQAVADV 148 (445)
Q Consensus 78 La~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~-~~~v~--------~~CsSgl~Al~~A 148 (445)
-...|++++|+++|++++|||.+=+- +-| ..........+|++...+ .+.++ ...++|+..|..+
T Consensus 318 ~~~~a~~~al~~agl~~~did~~E~~----dAF--~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~ 391 (520)
T 4egv_A 318 ASVTAVNEALRVAGIGLDDVAAFDLY----SCF--PFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEA 391 (520)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEEC----CSS--SHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEEe----CCc--HHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHH
Confidence 34678999999999999999976652 332 122333444788853221 12222 2467889999999
Q ss_pred HHHHHcCCCCeE
Q 013344 149 AAAIKAGFYDIG 160 (445)
Q Consensus 149 ~~~I~sG~~~~v 160 (445)
...++.+..+..
T Consensus 392 v~~lr~~~~~~~ 403 (520)
T 4egv_A 392 VNEMRDKPGQFA 403 (520)
T ss_dssp HHHHHHSTTCEE
T ss_pred HHHHhcCCCCce
Confidence 999998766655
No 144
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=47.99 E-value=29 Score=34.57 Aligned_cols=78 Identities=17% Similarity=0.096 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCC-CCCceEEe-----cCcCcHHHHHHHHHH
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP-ETVPVRTV-----NRQCSSGLQAVADVA 149 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~-~~~~~~~v-----~~~CsSgl~Al~~A~ 149 (445)
+-...++++||+++||+|+|||.|.. ++.++.. .......+...+|.. ..++.-.+ ....++|+..+..+.
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~g--D~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~ 378 (438)
T 2iwz_A 301 EGALRCMAAALKDAGVQPEEISYINAHATSTPLG--DAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTT 378 (438)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH--HHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEecCCCCccc--CHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHH
Confidence 44577899999999999999998764 2221110 011222333334432 12333221 234678888888899
Q ss_pred HHHHcCC
Q 013344 150 AAIKAGF 156 (445)
Q Consensus 150 ~~I~sG~ 156 (445)
..++.|.
T Consensus 379 l~l~~~~ 385 (438)
T 2iwz_A 379 LACYYQK 385 (438)
T ss_dssp HHHHHTE
T ss_pred HHHhcCc
Confidence 9998874
No 145
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=47.86 E-value=61 Score=31.83 Aligned_cols=18 Identities=22% Similarity=0.436 Sum_probs=16.9
Q ss_pred HHHHHHHHHcCCCCCCcc
Q 013344 322 VAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID 339 (445)
.++.++|+++|++++|||
T Consensus 83 ~aa~~Al~dAg~~~~~i~ 100 (416)
T 1e5m_A 83 CASQQAINDAKLVINELN 100 (416)
T ss_dssp HHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHcCCChhhcC
Confidence 789999999999999998
No 146
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=47.18 E-value=60 Score=35.97 Aligned_cols=80 Identities=20% Similarity=0.296 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCCCCceE--Ee-----cCcCcHHHHHHHH
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPVR--TV-----NRQCSSGLQAVAD 147 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~--~v-----~~~CsSgl~Al~~ 147 (445)
.+-...++++||+++||+|+|||.|-. |+.++-+. +.....+...++-....|.. .+ ...+++|+..+..
T Consensus 268 ~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD--~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik 345 (965)
T 3hhd_A 268 GDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGD--PQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAK 345 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHH--HHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCC--HHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHH
Confidence 455678999999999999999998763 44444331 22334443344432122222 11 1357899999999
Q ss_pred HHHHHHcCCC
Q 013344 148 VAAAIKAGFY 157 (445)
Q Consensus 148 A~~~I~sG~~ 157 (445)
+..+++.|.+
T Consensus 346 ~~l~l~~~~i 355 (965)
T 3hhd_A 346 VLLSLEHGLW 355 (965)
T ss_dssp HHHHHHHTEE
T ss_pred HHHHHhcCCc
Confidence 9999998753
No 147
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=46.12 E-value=15 Score=36.79 Aligned_cols=78 Identities=17% Similarity=0.154 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCCCCceEEe-----cCcCcHHHHHHHHHHHH
Q 013344 78 LLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPVRTV-----NRQCSSGLQAVADVAAA 151 (445)
Q Consensus 78 La~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-----~~~CsSgl~Al~~A~~~ 151 (445)
-...++++||+++||+|+|||.+.. ++.++.. .......+...+|....++...+ ....++|+..+..+...
T Consensus 309 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~--d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~ 386 (451)
T 4ddo_A 309 GAMRAMKLALRMGDVAPEQVDYVNAHATSTPVG--DAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILA 386 (451)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH--HHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEecCCcCccc--CHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHH
Confidence 4567899999999999999998764 2211111 01122223334443212332211 13467888889999999
Q ss_pred HHcCCC
Q 013344 152 IKAGFY 157 (445)
Q Consensus 152 I~sG~~ 157 (445)
++.|.+
T Consensus 387 l~~~~i 392 (451)
T 4ddo_A 387 LRDGVL 392 (451)
T ss_dssp HHHTEE
T ss_pred HhcCCc
Confidence 988753
No 148
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=45.14 E-value=63 Score=32.07 Aligned_cols=18 Identities=39% Similarity=0.460 Sum_probs=16.9
Q ss_pred HHHHHHHHHcCCCCCCcc
Q 013344 322 VAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID 339 (445)
.++.++|+++|++++|||
T Consensus 104 ~aa~~AL~dAGl~~~~i~ 121 (437)
T 2gqd_A 104 VAAREAVKDAQLDINENT 121 (437)
T ss_dssp HHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHcCCCccccC
Confidence 789999999999999998
No 149
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=44.35 E-value=19 Score=35.63 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCCCCceEEe-----cCcCcHHHHHHHHHHHH
Q 013344 78 LLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPVRTV-----NRQCSSGLQAVADVAAA 151 (445)
Q Consensus 78 La~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-----~~~CsSgl~Al~~A~~~ 151 (445)
-...++++||+++||+|+|||.|.. |+.++.. .......+...+|-. .++...+ ....++|+..+..+...
T Consensus 280 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~--D~~E~~al~~~~g~~-~~~v~s~K~~~GH~~gAaG~~~~~~~~~~ 356 (415)
T 1tqy_B 280 GLERAIRLALNDAGTGPEDVDVVFADGAGVPEL--DAAEARAIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMS 356 (415)
T ss_dssp SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHH--HHHHHHHHHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCc--CHHHHHHHHHHhCCC-CceEeccchhhccChHHHHHHHHHHHHHH
Confidence 4567899999999999999998764 2222111 012233333344432 1332221 12457888889999999
Q ss_pred HHcCCC
Q 013344 152 IKAGFY 157 (445)
Q Consensus 152 I~sG~~ 157 (445)
++.|..
T Consensus 357 l~~~~i 362 (415)
T 1tqy_B 357 LREGVI 362 (415)
T ss_dssp HHHTSB
T ss_pred HhcCCc
Confidence 998764
No 150
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=44.24 E-value=91 Score=34.31 Aligned_cols=79 Identities=20% Similarity=0.293 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCC--CCceEEec--------CcCcHHHHH
Q 013344 76 DDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPE--TVPVRTVN--------RQCSSGLQA 144 (445)
Q Consensus 76 ~eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~--~~~~~~v~--------~~CsSgl~A 144 (445)
.+-...++++||+++||+|+|||.|.. |+.++-+ .......+...+|... ..|+ .++ ...++|+..
T Consensus 285 ~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~g--D~~E~~al~~~f~~~~~~~~~~-~vgs~K~~iGH~~~AaG~~~ 361 (915)
T 2qo3_A 285 GPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALG--DPIEANALLDTYGRDRDADRPL-WLGSVKSNIGHTQAAAGVTG 361 (915)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTT--HHHHHHHHHHHTSSSCCTTSCE-EEECTHHHHCBCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccC--CHHHHHHHHHHhccccCCCCcc-cccCcccceeCCccccchHH
Confidence 455678999999999999999998764 4433322 1233344444556421 1232 222 246789999
Q ss_pred HHHHHHHHHcCCC
Q 013344 145 VADVAAAIKAGFY 157 (445)
Q Consensus 145 l~~A~~~I~sG~~ 157 (445)
+..+...++.|.+
T Consensus 362 lik~~l~L~~~~i 374 (915)
T 2qo3_A 362 LLKVVLALRNGEL 374 (915)
T ss_dssp HHHHHHHHHHTEE
T ss_pred HHHHHHHHhcCCC
Confidence 9999999998753
No 151
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=42.52 E-value=90 Score=30.78 Aligned_cols=18 Identities=28% Similarity=0.438 Sum_probs=16.9
Q ss_pred HHHHHHHHHcCCCCCCcc
Q 013344 322 VAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID 339 (445)
.++.++|+++|++++|||
T Consensus 99 ~aa~~AL~dAG~~~~~i~ 116 (430)
T 1ox0_A 99 YAAQEAVNHANLDVEALN 116 (430)
T ss_dssp HHHHHHHHHTTCCTTTSC
T ss_pred HHHHHHHHHcCCChhhcC
Confidence 789999999999999998
No 152
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=42.13 E-value=34 Score=34.02 Aligned_cols=79 Identities=10% Similarity=0.081 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEE----e-cCcCcHHHHHHHHHHHH
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----V-NRQCSSGLQAVADVAAA 151 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~----v-~~~CsSgl~Al~~A~~~ 151 (445)
+-...++++||+++|++|+|||.+..- .+............+...+|-. .++... + ...+++|+..+..+...
T Consensus 302 ~~~~~ai~~al~~Agl~~~dId~ve~H-gtgt~~~D~~E~~al~~~fg~~-~~~v~s~k~~~GH~~gAaG~~~~i~~~~~ 379 (434)
T 2gp6_A 302 ERAGHAITRAIQLAGLAPGDIDHVNAH-ATGTQVGDLAEGRAINNALGGN-RPAVYAPKSALGHSVGAVGAVESILTVLA 379 (434)
T ss_dssp HHHHHHHHHHHHHTTCCTTTEEEEECC-CCSCHHHHHHHHHHHHHHHTTC-CCEECCTHHHHCBCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEe-CCcCccchHHHHHHHHHHhccC-CCCcccchhhhcCchhhhHHHHHHHHHHH
Confidence 445778999999999999999977642 2211100011122222233421 121111 1 13467889999999999
Q ss_pred HHcCCC
Q 013344 152 IKAGFY 157 (445)
Q Consensus 152 I~sG~~ 157 (445)
++.|..
T Consensus 380 l~~~~i 385 (434)
T 2gp6_A 380 LRDQVI 385 (434)
T ss_dssp HHHSCC
T ss_pred HhcCcc
Confidence 998764
No 153
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=40.84 E-value=31 Score=28.09 Aligned_cols=51 Identities=20% Similarity=0.312 Sum_probs=37.2
Q ss_pred HHHHHHHHcCCCC-CCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecC
Q 013344 82 VLKAVIEKTNVDP-SEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNR 136 (445)
Q Consensus 82 Aa~~AL~~Agi~~-~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~ 136 (445)
-..+.+++.+|++ +||-.|+| ++++|.. ..+|+..+- .+|+. .+|.+....
T Consensus 26 Ll~~i~~~N~l~~~~divSv~F-T~T~DL~-a~FPA~aaR-~~g~~-~VpL~c~qE 77 (122)
T 1ufy_A 26 LLLKMLEANGIQSYEELAAVIF-TVTEDLT-SAFPAEAAR-QIGMH-RVPLLSARE 77 (122)
T ss_dssp HHHHHHHHHTCCCGGGEEEEEE-EECTTCC-SCCHHHHHH-HTTGG-GSCEEEEEC
T ss_pred HHHHHHHhcCCCChHhEEEEEE-EeCCccC-ccChHHHHH-HcCCC-ccchhhccc
Confidence 3455567789999 99988888 5677765 567887766 45985 688887543
No 154
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=39.93 E-value=25 Score=28.80 Aligned_cols=52 Identities=17% Similarity=0.344 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHHHHHHHHcCCCCCCceEEecC
Q 013344 82 VLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNR 136 (445)
Q Consensus 82 Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v~~ 136 (445)
-..+.+++.+|+++||-.|+| ++++|.. ..+|+..+-...|+. .+|.+....
T Consensus 27 Ll~~i~~~N~l~~~dIvSv~F-T~T~DL~-a~FPA~aaR~~~gw~-~VpL~c~qE 78 (127)
T 1dbf_A 27 LLEKIIEENHTKPEDVVQMLL-SATPDLH-AVFPAKAVRELSGWQ-YVPVTCMQE 78 (127)
T ss_dssp HHHHHHHHHCCCGGGEEEEEE-EECTTCC-SSCTHHHHHTSTTCT-TSCEEEEEC
T ss_pred HHHHHHHHcCCCHHHEEEEEE-EeCCccC-ccChHHHHhccCCCC-ccchhhccc
Confidence 345556788999999988888 5677765 567887665333885 688887553
No 155
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=38.69 E-value=13 Score=38.84 Aligned_cols=28 Identities=29% Similarity=0.427 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecCC
Q 013344 319 GPAVAIPAAVKSAGLQLDDIDLFEINEA 346 (445)
Q Consensus 319 ~~~~ai~~aL~~aGl~~~DID~~e~h~~ 346 (445)
.|..||+.+|+++|++++|||.+.+...
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 4668999999999999999999998764
No 156
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=37.41 E-value=1.1e+02 Score=29.91 Aligned_cols=18 Identities=33% Similarity=0.553 Sum_probs=17.1
Q ss_pred HHHHHHHHHcCCCCCCcc
Q 013344 322 VAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID 339 (445)
.++.++|+++|++++|||
T Consensus 80 ~Aa~~AL~dAGl~~~~id 97 (413)
T 3o04_A 80 ASAEMAVQDSGLVIDDSN 97 (413)
T ss_dssp HHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHcCCChhHcC
Confidence 789999999999999998
No 157
>3onr_A Protein transport protein SECE2; calcium dodecin, calcium binding protein, dodecamer, imuuno antigen, metal binding protein; 1.80A {Mycobacterium tuberculosis}
Probab=35.84 E-value=14 Score=27.28 Aligned_cols=26 Identities=31% Similarity=0.243 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecC
Q 013344 320 PAVAIPAAVKSAGLQLDDIDLFEINE 345 (445)
Q Consensus 320 ~~~ai~~aL~~aGl~~~DID~~e~h~ 345 (445)
+..|++.++++|.-+..+|++||+-+
T Consensus 18 ~edAi~nAi~~AskTl~ni~~~eV~e 43 (72)
T 3onr_A 18 WEQAAAEAVQRARDSVDDIRVARVIE 43 (72)
T ss_dssp HHHHHHHHHHHHHHHCSCCCEEEEEE
T ss_pred HHHHHHHHHHHHHhcccCCeEEEEEE
Confidence 34999999999999999999999864
No 158
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=34.92 E-value=97 Score=34.10 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=57.3
Q ss_pred EEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCC--C
Q 013344 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPE--T 128 (445)
Q Consensus 52 v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~--~ 128 (445)
.+|.|.+...-++. .+ +. ....+-...++++||+++||+|+|||.|.. |+.++-+ .......+...+|... .
T Consensus 286 a~I~G~~~~~dg~~-~~-~~-~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~g--D~~E~~al~~~fg~~~~~~ 360 (917)
T 2hg4_A 286 AVLRGSAVNQDGAS-NG-LT-APSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLG--DPIEVHALLSTYGAERDPD 360 (917)
T ss_dssp EEEEEEEEEECCSC-SS-SS-CCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTH--HHHHHHHHHTTTTTSSCTT
T ss_pred EEEEEEEEecCCCc-cC-CC-CCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccC--cHHHHHHHHHHhccccCCC
Confidence 56777665544332 11 11 122455678899999999999999998764 3333221 1122223333444321 1
Q ss_pred CceEE--e-----cCcCcHHHHHHHHHHHHHHcCC
Q 013344 129 VPVRT--V-----NRQCSSGLQAVADVAAAIKAGF 156 (445)
Q Consensus 129 ~~~~~--v-----~~~CsSgl~Al~~A~~~I~sG~ 156 (445)
.++.. + ....++|+..+..+...++.|.
T Consensus 361 ~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ 395 (917)
T 2hg4_A 361 DPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGE 395 (917)
T ss_dssp SCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTE
T ss_pred CceeccCcccceecchhhhHHHHHHHHHHHHhcCC
Confidence 22221 1 1345788999999999999875
No 159
>2cc6_A VNG1446H, dodecin; flavoprotein, flavin, flavin-like ligands; HET: LUM; 1.27A {Halobacterium salinarum} SCOP: d.230.2.1 PDB: 2cc7_A* 2cc8_A* 2cc9_A 2ccb_A* 2ccc_A* 2cif_A* 2cjc_A* 1mog_A* 2vx9_A* 2cie_A* 2vkf_A* 2vkg_A*
Probab=34.45 E-value=14 Score=26.99 Aligned_cols=27 Identities=22% Similarity=0.199 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCC
Q 013344 320 PAVAIPAAVKSAGLQLDDIDLFEINEA 346 (445)
Q Consensus 320 ~~~ai~~aL~~aGl~~~DID~~e~h~~ 346 (445)
+..|++.++++|.-+..+|++|++-+.
T Consensus 16 ~edAi~nAi~~AskTl~ni~~~eV~e~ 42 (68)
T 2cc6_A 16 FTAAADDAIDRAEDTLDNVVWAEVVDQ 42 (68)
T ss_dssp HHHHHHHHHHHHHHHCSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcccCCeEEEEEEE
Confidence 348999999999999999999998653
No 160
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=33.91 E-value=60 Score=27.12 Aligned_cols=49 Identities=12% Similarity=0.074 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeccCCCcccchHH-HHHHHHcCCC
Q 013344 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASEC-RMAAFYAGFP 126 (445)
Q Consensus 72 ~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g~~~~~~~~~~~~a-~~~~~~lGl~ 126 (445)
+.+.+++ .++++++|+++|+++.+|+.+..-..-.+ .++ ..++..+|+|
T Consensus 21 g~~~~~i-~~ai~~aL~~~~l~~~~v~~latid~K~d-----E~gL~~~A~~lg~p 70 (145)
T 2w6k_A 21 GCSAEHL-RALLERTLGEHGRSLAELDALASIDGKRD-----EPGLRQLATLLERP 70 (145)
T ss_dssp TCCHHHH-HHHHHHHHHHTTCCGGGCCEEEEECSSSC-----CHHHHHHHHHHTSC
T ss_pred CCCHHHH-HHHHHHHHHHcCCCHHHcceEechHHhCC-----CHHHHHHHHHhCCC
Confidence 4555555 67889999999999999998876543332 233 3455688875
No 161
>2ux9_A Dodecin; flavoprotein; HET: FMN COA; 1.4A {Thermus thermophilus} SCOP: d.230.2.1 PDB: 2cz8_A* 2deg_A 2deh_A 2dev_A 2v21_A* 2v18_A* 2vyx_A* 2v19_A*
Probab=33.64 E-value=14 Score=26.91 Aligned_cols=26 Identities=38% Similarity=0.492 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecC
Q 013344 320 PAVAIPAAVKSAGLQLDDIDLFEINE 345 (445)
Q Consensus 320 ~~~ai~~aL~~aGl~~~DID~~e~h~ 345 (445)
+..|++.++++|.-+..+|++|++-+
T Consensus 18 ~edAi~nAi~~AskTl~ni~~~eV~e 43 (69)
T 2ux9_A 18 LEAAIQAALARARKTLRHLDWFEVKE 43 (69)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcccCCeEEEEEE
Confidence 34999999999999999999999865
No 162
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=32.97 E-value=19 Score=35.35 Aligned_cols=40 Identities=20% Similarity=0.279 Sum_probs=31.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~-----~~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++| ++|||++.+.- ........+.+.||+.+
T Consensus 61 ~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~ 105 (388)
T 3v4n_A 61 ANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQP 105 (388)
T ss_dssp HHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCC
Confidence 478899999987 89999998732 23345678889999976
No 163
>2vxa_A Dodecin; flavoprotein, flavin, riboflavin, lumichrome, archaea; HET: RBF; 2.60A {Halorhodospira halophila}
Probab=32.69 E-value=15 Score=27.02 Aligned_cols=26 Identities=27% Similarity=0.399 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecC
Q 013344 320 PAVAIPAAVKSAGLQLDDIDLFEINE 345 (445)
Q Consensus 320 ~~~ai~~aL~~aGl~~~DID~~e~h~ 345 (445)
+..|++.++++|.-+..+|++|++-+
T Consensus 19 ~edAi~nAi~~AskTl~ni~~~eV~e 44 (72)
T 2vxa_A 19 IEEAVNNAIARAGETLRHLRWFEVVD 44 (72)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHhhccCCeEEEEEE
Confidence 34999999999999999999999865
No 164
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=32.67 E-value=18 Score=36.07 Aligned_cols=40 Identities=20% Similarity=0.359 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCCC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDP 362 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h-----~~~~~~~~~~~e~LGl~~ 362 (445)
..|++++|+++| ++|||++.+- +........+.+.||+.+
T Consensus 90 ~~Aa~~aL~~ag--~~dId~li~~t~t~~~~~ps~a~~v~~~LGl~~ 134 (425)
T 3sqz_A 90 AGSANEILTAED--KEKIDMVILATESSVDQSKAGAVYVHSLLGIQP 134 (425)
T ss_dssp HHHHHTTCCHHH--HHHEEEEEEECSCCSCSSSCHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhCC--hhhCCEEEEEecccccccchHHHHHHHHhCCCC
Confidence 478999999998 9999999873 223445678889999976
No 165
>2yiz_A Dodecin; flavoprotein, flavin binding protein, protein-engineering, P storage protein; HET: COA FMN GOL; 1.70A {Mycobacterium tuberculosis} PDB: 3oqt_A 2yj0_A*
Probab=30.68 E-value=15 Score=26.79 Aligned_cols=27 Identities=22% Similarity=0.378 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCC
Q 013344 320 PAVAIPAAVKSAGLQLDDIDLFEINEA 346 (445)
Q Consensus 320 ~~~ai~~aL~~aGl~~~DID~~e~h~~ 346 (445)
+..|++.++++|.-+..+|++|++-+.
T Consensus 18 ~edAi~nAi~~AskTl~ni~~~eV~e~ 44 (69)
T 2yiz_A 18 VDAAIQGGLARAAQTMRALDWFEVQSI 44 (69)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcccCCeEEEEEEE
Confidence 348999999999999999999998653
No 166
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=28.40 E-value=1.3e+02 Score=29.63 Aligned_cols=18 Identities=17% Similarity=0.244 Sum_probs=16.1
Q ss_pred HHHHHHHHHcCC-CCCCcc
Q 013344 322 VAIPAAVKSAGL-QLDDID 339 (445)
Q Consensus 322 ~ai~~aL~~aGl-~~~DID 339 (445)
.++.++|+++|+ ++++||
T Consensus 94 ~aa~~AL~dAG~~~~~~i~ 112 (431)
T 2ix4_A 94 CAADEALRDAEWLPTEEEE 112 (431)
T ss_dssp HHHHHHHHHTTCCCCSHHH
T ss_pred HHHHHHHHHcCCCCccccC
Confidence 789999999999 888776
No 167
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=25.67 E-value=44 Score=35.13 Aligned_cols=43 Identities=21% Similarity=0.276 Sum_probs=35.7
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCChH-HHHHHHHHcCCCCCC
Q 013344 322 VAIPAAVKSAGLQLDDIDLFEINEAFAS-QFVYCRNKLGLDPEK 364 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID~~e~h~~~~~-~~~~~~e~LGl~~~~ 364 (445)
..++.+|+++|++.+|||.+.+-.+|.. +...-+..+|+-|+-
T Consensus 519 agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP~~ 562 (631)
T 3zyy_X 519 AGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDI 562 (631)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSCCS
T ss_pred HHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCCCc
Confidence 6788899999999999999999888775 456677788987753
No 168
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=25.02 E-value=31 Score=35.91 Aligned_cols=46 Identities=9% Similarity=0.112 Sum_probs=30.1
Q ss_pred EEEEEeeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEE
Q 013344 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVG 103 (445)
Q Consensus 52 v~Ivg~~rT~~~~~~~G~~~~~~~~eLa~~Aa~~AL~~Agi~~~dId~vi~g 103 (445)
..|..+..--|.|.+. .+. .+=..|++.+|+++||+++|||.|++.
T Consensus 31 ~ivaA~eEERftR~Kh--~~~----~fP~~AI~~cL~~AGi~~~DID~Va~~ 76 (576)
T 3ven_A 31 RIAAFAEEERLTRKKH--GYN----TAPVQAAAFCLAQAGLTVDDLDAVAFG 76 (576)
T ss_dssp EEEEEEEHHHHHCCTT--CTT----SCCHHHHHHHHHHHTCCGGGCSEEEES
T ss_pred EEEEEEEEEEeeeecc--cCC----CCCHHHHHHHHHHcCCCHHHCcEEEEE
Confidence 3444445556665431 111 123457899999999999999999964
No 169
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=23.30 E-value=47 Score=30.00 Aligned_cols=25 Identities=16% Similarity=0.332 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEec
Q 013344 320 PAVAIPAAVKSAGLQLDDIDLFEIN 344 (445)
Q Consensus 320 ~~~ai~~aL~~aGl~~~DID~~e~h 344 (445)
+..+++++|+++|++++|||.+.+-
T Consensus 38 l~~~i~~~L~~a~~~~~did~Iav~ 62 (231)
T 2gel_A 38 ILPMVQEILAASGASLNEIDALAFG 62 (231)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 4589999999999999999999884
No 170
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=23.26 E-value=1.3e+02 Score=29.56 Aligned_cols=18 Identities=28% Similarity=0.591 Sum_probs=16.5
Q ss_pred HHHHHHHHHcCCCCCCcc
Q 013344 322 VAIPAAVKSAGLQLDDID 339 (445)
Q Consensus 322 ~ai~~aL~~aGl~~~DID 339 (445)
.++.++|+++|++++|||
T Consensus 98 ~aa~~Al~dAGl~~~~i~ 115 (428)
T 3mqd_A 98 IAMDQAIADAGLTEEEVS 115 (428)
T ss_dssp HHHHHHHHHHTCCHHHHS
T ss_pred HHHHHHHHHcCCChhHcc
Confidence 789999999999998887
No 171
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=22.65 E-value=33 Score=33.93 Aligned_cols=76 Identities=16% Similarity=0.216 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEE-EeccCCCcccchHHHHHHHHcCCCCCCceEEe-----cCcCcHHHHHHHHHHH
Q 013344 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPVRTV-----NRQCSSGLQAVADVAA 150 (445)
Q Consensus 77 eLa~~Aa~~AL~~Agi~~~dId~vi~-g~~~~~~~~~~~~a~~~~~~lGl~~~~~~~~v-----~~~CsSgl~Al~~A~~ 150 (445)
+-...+++++|+++|++|+|||.+.. |+.++.+. ......+ ..+|.. .++...+ ....++|+..+..+..
T Consensus 285 ~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~gD--~~E~~al-~~~~~~-~~~v~s~k~~~GH~~gAsG~~~~i~~~l 360 (416)
T 2wge_A 285 VRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGD--AAEANAI-RVAGCD-QAAVYAPKSALGHSIGAVGALESVLTVL 360 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHH--HHHHHHH-HHTTCT-TSEEECTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCCC--HHHHHHH-HHhccC-CCCccCCcccccCcHHHHHHHHHHHHHH
Confidence 34567899999999999999997764 22221110 1111222 233431 2332221 1235677777777777
Q ss_pred HHHcCC
Q 013344 151 AIKAGF 156 (445)
Q Consensus 151 ~I~sG~ 156 (445)
.++.|.
T Consensus 361 ~l~~~~ 366 (416)
T 2wge_A 361 TLRDGV 366 (416)
T ss_dssp HHHHTE
T ss_pred HHhcCC
Confidence 777654
No 172
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=21.51 E-value=46 Score=31.90 Aligned_cols=25 Identities=28% Similarity=0.456 Sum_probs=22.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC
Q 013344 321 AVAIPAAVKSAGLQLDDIDLFEINE 345 (445)
Q Consensus 321 ~~ai~~aL~~aGl~~~DID~~e~h~ 345 (445)
..+++++|+++|++++|||.+.+..
T Consensus 57 ~~~i~~~L~~ag~~~~did~Iav~~ 81 (334)
T 3eno_A 57 DTVISRALEKAKISIHDIDLIGFSM 81 (334)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 4799999999999999999998864
Done!