RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 013344
(445 letters)
>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase.
Length = 452
Score = 851 bits (2201), Expect = 0.0
Identities = 377/455 (82%), Positives = 414/455 (90%), Gaps = 21/455 (4%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ+VLL HLRPS+S S LSASACAAGDSAAYHRT+ +GDDVVIVAAYRT
Sbjct: 1 MEKAINRQRVLLRHLRPSSS----EPSSLSASACAAGDSAAYHRTTAFGDDVVIVAAYRT 56
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
+CK+KRGGFKDTYPDDLLAPVLKAV+EKT ++PSEVGDIVVGTVLAPGSQRA+ECRMAA
Sbjct: 57 PICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAA 116
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-----------------SVN 163
FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG VN
Sbjct: 117 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVN 176
Query: 164 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 223
P+V++F QAQ+CLLPMG+TSENVA RFGVTR+EQDQAAV+SHRKAAAATA+GKFKDEI+P
Sbjct: 177 PRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVP 236
Query: 224 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 283
V TKIVDPKTG+EKP+ ISVDDGIRPNT++++LAKLKPVFKK+GTTTAGNSSQVSDGAGA
Sbjct: 237 VHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGA 296
Query: 284 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 343
VLLMKRSVAM+KGLPILGVFR+FAAVGVDPA+MG+GPAVAIPAAVK+AGL+LDDIDLFEI
Sbjct: 297 VLLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEI 356
Query: 344 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 403
NEAFASQFVYC KLGLDPEK+NVNGGA+A+GHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 357 NEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFG 416
Query: 404 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNN 438
V+SMCIGTGMGAAAVFERGD DEL N RKVE NN
Sbjct: 417 VVSMCIGTGMGAAAVFERGDSVDELSNARKVEGNN 451
>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze
the reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and eukaryotes (cytosol,
microbodies and mitochondria). There are 2 functional
different classes: thiolase-I (3-ketoacyl-CoA thiolase)
and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I
can cleave longer fatty acid molecules and plays an
important role in the beta-oxidative degradation of
fatty acids. Thiolase-II has a high substrate
specificity. Although it can cleave acetoacyl-CoA, its
main function is the synthesis of acetoacyl-CoA from two
molecules of acetyl-CoA, which gives it importance in
several biosynthetic pathways.
Length = 386
Score = 501 bits (1293), Expect = e-177
Identities = 199/396 (50%), Positives = 253/396 (63%), Gaps = 37/396 (9%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIV+A RT + + G KD DDL A V+KA++E+ +DP EV D+++G VL G +
Sbjct: 1 VIVSAVRTPIGRFG-GALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAG-EG 58
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG--------SVNP 164
+ R AA AG PE+VP TVNR C SGLQAVA A +I AG D+ S P
Sbjct: 59 QNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAP 118
Query: 165 -------------------KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 205
+ L MG+T+ENVA ++G++R+EQD+ A+ SH
Sbjct: 119 YLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSH 178
Query: 206 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 265
++AAAA AG+FKDEI+PV G + PV + D+G RP+T++ +LAKLKP FKK
Sbjct: 179 QRAAAAQEAGRFKDEIVPVEVP------GRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKK 232
Query: 266 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIP 325
DGT TAGN+S ++DGA AVLLM A GL L +A GVDPAIMG+GP AIP
Sbjct: 233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIP 292
Query: 326 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARC 385
A+K AGL LDDIDL EINEAFA+Q + C +LGLDPEK+NVNGGA+A+GHPLG +GAR
Sbjct: 293 KALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARI 352
Query: 386 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
V TLLHE+KRRG R+G+ +MCIG G GAA V ER
Sbjct: 353 VVTLLHELKRRG--GRYGLATMCIGGGQGAAMVIER 386
>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases. This
model represents a large family of enzymes which
catalyze the thiolysis of a linear fatty acid CoA (or
acetoacetyl-CoA) using a second CoA molecule to produce
acetyl-CoA and a CoA-ester product two carbons shorter
(or, alternatively, the condensation of two molecules of
acetyl-CoA to produce acetoacetyl-CoA and CoA). This
enzyme is also known as "thiolase", "3-ketoacyl-CoA
thiolase", "beta-ketothiolase" and "Fatty oxidation
complex beta subunit". When catalyzing the degradative
reaction on fatty acids the corresponding EC number is
2.3.1.16. The condensation reaction corresponds to
2.3.1.9. Note that the enzymes which catalyze the
condensation are generally not involved in fatty acid
biosynthesis, which is carried out by a decarboxylating
condensation of acetyl and malonyl esters of acyl
carrier proteins. Rather, this activity may produce
acetoacetyl-CoA for pathways such as IPP biosynthesis in
the absence of sufficient fatty acid oxidation [Fatty
acid and phospholipid metabolism, Other].
Length = 386
Score = 462 bits (1192), Expect = e-162
Identities = 188/396 (47%), Positives = 244/396 (61%), Gaps = 39/396 (9%)
Query: 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA 113
IVAA RT + K G KD +DL A V+K ++E+ +DP + D++ G VL G Q
Sbjct: 1 IVAAARTPIGKFG-GSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQ-Q 58
Query: 114 SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------------- 160
+ R AA AG PE+VP TVNRQC+SGLQAV A I+AG D+
Sbjct: 59 NIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPY 118
Query: 161 --------SVNPKVKAFEQAQNCL--------LPMGVTSENVAHRFGVTRKEQDQAAVDS 204
V P E L MG+T+EN+A ++G++R+EQD+ A+ S
Sbjct: 119 SVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRS 178
Query: 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 264
H++AA A G FKDEI+PV + K PV +S D+GIRPNT++ +LAKLKP F
Sbjct: 179 HQRAAKAWEEGLFKDEIVPV--SVKGRK----GPVVVSSDEGIRPNTTLEKLAKLKPAFD 232
Query: 265 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAI 324
+GT TAGNSS ++DGA A+LLM A GL L ++A GVDP IMG+GP AI
Sbjct: 233 PNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAI 292
Query: 325 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGAR 384
P A+K AGL + DIDLFEINEAFA+Q + C +LGLD EK+NVNGGA+A+GHPLG +GAR
Sbjct: 293 PKALKKAGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGAR 352
Query: 385 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
V TLLHE+KRRG R+G+ ++CIG G G A + E
Sbjct: 353 IVTTLLHELKRRGG--RYGLATICIGGGQGIAVILE 386
>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional.
Length = 393
Score = 401 bits (1034), Expect = e-138
Identities = 181/405 (44%), Positives = 246/405 (60%), Gaps = 47/405 (11%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
DVVIV+A RT + K G KD +L A V+KA +E+ V P +V ++++G VL G
Sbjct: 2 KDVVIVSAARTPIGKFG-GALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAG 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---GSV---- 162
+ + + R AA AG P VP T+N+ C SGL+AVA A AI+AG DI G
Sbjct: 61 AGQ-NPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMS 119
Query: 163 ----------------NPKVK----------AFEQAQNCLLPMGVTSENVAHRFGVTRKE 196
+ ++ AF MG+T+EN+A ++G+TR+E
Sbjct: 120 QAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNG-----YHMGITAENLAEQYGITREE 174
Query: 197 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 256
QD+ A+ S +KA AA AG+FKDEI+PV K + GD PV + D+ RP+T+ L
Sbjct: 175 QDEFALASQQKAEAAIKAGRFKDEIVPVTIKQ---RKGD--PVVVDTDEHPRPDTTAESL 229
Query: 257 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM 316
AKL+P F KDGT TAGN+S ++DGA AV++M + A GL L ++A GVDPAIM
Sbjct: 230 AKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIM 289
Query: 317 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 376
G+GP AI A++ AG L D+DL EINEAFA+Q + +LGLDPEK+NVNGGA+A+GH
Sbjct: 290 GIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGH 349
Query: 377 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
P+G +GAR + TLLHEMKRRG + G+ ++CIG G G A + ER
Sbjct: 350 PIGASGARILVTLLHEMKRRG--AKKGLATLCIGGGQGVALIVER 392
>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional.
Length = 399
Score = 389 bits (1002), Expect = e-133
Identities = 181/396 (45%), Positives = 248/396 (62%), Gaps = 29/396 (7%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
D IVAA RT + K+ RG FK+T PDDLLA VL++ + + +DP + D +VG +
Sbjct: 7 DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEA 66
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG--------- 160
Q + R+ A AG P +V TVNR C+SGLQAVA A I+ G D+
Sbjct: 67 EQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMS 126
Query: 161 ---------SVNPKVKAFEQAQNCLLP--MGVTSENVAHRFGVTRKEQDQAAVDSHRKAA 209
S++P + F + +N + MG+T+E VA ++ V+R++QD A++SH+KA
Sbjct: 127 MVPMMGNKPSMSPAI--FARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAI 184
Query: 210 AATAAGKFKDEIIP--VATKIVDPKTG--DEKPVTISVDDGIRPNTSVSELAKLKPVFKK 265
AA AG+FKDEI P + + D TG D K T+ +D+G R +TS+ LAKLKPVF
Sbjct: 185 AAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFAN 244
Query: 266 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIP 325
G+ TAGNSSQ SDGAGAV+L+ + L L F +FA GV P IMG+GP AIP
Sbjct: 245 KGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIP 304
Query: 326 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARC 385
AA+K AGL+ DD+D E+NEAFA+Q + LGLDP K+N GGA+A+GHPLG TGA
Sbjct: 305 AALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIR 364
Query: 386 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
AT++H ++R ++G+++MC+GTGMGAA +FER
Sbjct: 365 TATVVHGLRRTNL--KYGMVTMCVGTGMGAAGIFER 398
>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional.
Length = 391
Score = 384 bits (987), Expect = e-131
Identities = 178/388 (45%), Positives = 237/388 (61%), Gaps = 21/388 (5%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIVA RT + K+K+G K PDDL A V+K +++ + D+++G + Q
Sbjct: 5 VIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQG 64
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI------------- 159
+ R AG P TVP T+NR CSSGLQ++A A I G +
Sbjct: 65 LNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVP 124
Query: 160 ---GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 216
V P + E A + MG T+E VA ++G++R++QD AV SH++AA A A GK
Sbjct: 125 MMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGK 184
Query: 217 FKDEIIPV---ATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGN 273
F DEI+PV + + E+ +T S D+G+R +T++ L KL+P F G+ TAGN
Sbjct: 185 FADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGN 244
Query: 274 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGL 333
SSQ+SDGA AVLLM R A GL L FR+FA GV P +MG+GP AIP A+K AGL
Sbjct: 245 SSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGL 304
Query: 334 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 393
+L DI LFE+NEAFASQ + +LGLD EK+NVNGGA+A+GHPLG TGA+ +L+HEM
Sbjct: 305 ELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364
Query: 394 KRRGRDCRFGVISMCIGTGMGAAAVFER 421
KRR +FG+++MCIG GMGAA VFE
Sbjct: 365 KRRNE--QFGIVTMCIGGGMGAAGVFEL 390
>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 343 bits (881), Expect = e-115
Identities = 173/392 (44%), Positives = 241/392 (61%), Gaps = 26/392 (6%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
+ VIV+ RT L KS RG F T+ L V++ +E+ +DP+EV D+++G G+
Sbjct: 3 EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGA 62
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFE 170
A+ R A AG P TVP TVNR CSSGLQ +A A + AG D+ V V++
Sbjct: 63 TGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDV-FVAGGVESIS 121
Query: 171 QAQNCL------------------LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 212
QN + M T+ENVA R+G++++ QD+ V S ++AAAA
Sbjct: 122 CVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKERQDEYGVQSQQRAAAAQ 181
Query: 213 AAGKFKDEIIP--VATKIVDPKTGD--EKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 268
AAG+F DEI+P V + D TG K VT+S D+GIRP+T++ ++K++ G
Sbjct: 182 AAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALP-GGV 240
Query: 269 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAV 328
TAGN+SQ SDGA A ++M VA R+GL LG+FR FA G +P MG+GP A+P +
Sbjct: 241 ITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLL 300
Query: 329 KSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVAT 388
K AGL++DDIDL+E+NEAFA Q +YCR+ LG+ +++NVNGGA+A+GHP G +GAR
Sbjct: 301 KQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGH 360
Query: 389 LLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
L E KRRG ++ V++MCIG G GAA +FE
Sbjct: 361 ALIEGKRRG--AKYVVVTMCIGGGQGAAGLFE 390
>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 387
Score = 338 bits (868), Expect = e-113
Identities = 168/394 (42%), Positives = 230/394 (58%), Gaps = 33/394 (8%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
DVVIV A RT + +SK G F++ +DL A ++++++ + +DP+E+ DI+ G V
Sbjct: 3 DVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTL 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG---FYDIGSV---- 162
Q + R AA AG P +VP TVNR C S +QA+ D A AI G + IG V
Sbjct: 63 EQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMG 122
Query: 163 ----------NPKV-KAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 211
+P + K +A MG+T+E + G++R++QD A SH++A AA
Sbjct: 123 HVPMNHGVDFHPGLSKNVAKAAGM---MGLTAEMLGKMHGISREQQDAFAARSHQRAWAA 179
Query: 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK-KDGTTT 270
T G+FK+EIIP + D D+ IRP T+V LA L+P F +GT T
Sbjct: 180 TQEGRFKNEIIPT-----EGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVT 234
Query: 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKS 330
AG SS +SDGA A+L+M S A GL R+ A G DP+IMG GP A A+K
Sbjct: 235 AGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKR 294
Query: 331 AGLQLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGALAIGHPLGTTGARCVA 387
AGL + DID+FE+NEAFA+Q + C LGL EK+N+NGGA+A+GHPLG +GAR
Sbjct: 295 AGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARIST 354
Query: 388 TLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
TLL+ M+R +D +FG+ +MCIG G G A VFER
Sbjct: 355 TLLNLMER--KDAQFGLATMCIGLGQGIATVFER 386
>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional.
Length = 394
Score = 326 bits (839), Expect = e-109
Identities = 165/403 (40%), Positives = 231/403 (57%), Gaps = 45/403 (11%)
Query: 51 DVVIVAAYRTALCKSKRGGF----KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVL 106
+VV+V+ RTA+ G F KD P DL A V++ + + VDP +VG +V G V+
Sbjct: 4 EVVVVSGVRTAI-----GTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVI 58
Query: 107 APGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------ 160
+ R+AA AG P+ P VNR C SGLQA+ A AI G D+
Sbjct: 59 PTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAE 118
Query: 161 --SVNP-------------KVKAFEQAQNCL------LPMGVTSENVAHRFGVTRKEQDQ 199
S P K + L + MGVT+ENVA ++G++R+ QD
Sbjct: 119 SMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVAAKYGISREAQDA 178
Query: 200 AAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 259
A++SHR+AAAA AAG FKD+I+PV K + G+ V D+ +R +T++ +LAKL
Sbjct: 179 LALESHRRAAAAIAAGYFKDQIVPVEIKT---RKGE---VVFDTDEHVRADTTLEDLAKL 232
Query: 260 KPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV 318
KPVFKK+ GT TAGN+S ++DGA AV+L + A +GL L +A GVDP MG+
Sbjct: 233 KPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGI 292
Query: 319 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPL 378
GP A A++ AGL + D+D+ E NEAFA+Q +LGLDP K+N NG +++GHP+
Sbjct: 293 GPVPATQKALERAGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPV 352
Query: 379 GTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
G TGA L+E++R G R+ +++MCIG G G AA+FER
Sbjct: 353 GATGAIITVKALYELQRIGG--RYALVTMCIGGGQGIAAIFER 393
>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional.
Length = 394
Score = 316 bits (811), Expect = e-105
Identities = 159/400 (39%), Positives = 222/400 (55%), Gaps = 36/400 (9%)
Query: 50 DDVVIVAAYRTALCKSK-----RGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104
+DV +V RTA + + + F + P++L A ++ +IEKT + P E+ DI+ G
Sbjct: 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61
Query: 105 VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---GS 161
L G R F A P +P V+RQC+S L V+ A I G DI G
Sbjct: 62 ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121
Query: 162 V----------------NPKVKAFEQAQNCLLP----MGVTSENVAHRFGVTRKEQDQAA 201
V NPK+ + L MG+T+E +A G+ R+E D+ +
Sbjct: 122 VEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWS 181
Query: 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261
+ SH+ AA A G FKDEI+P+ ++ + K + VD +RP+TS+ +LAKL P
Sbjct: 182 LRSHQLAAKAIQEGYFKDEILPIEVEV------EGKKKVVDVDQSVRPDTSLEKLAKLPP 235
Query: 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPA 321
FK DG TAGNSS ++ GA VLLM + + GL + R+F GV PAIMG GP
Sbjct: 236 AFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPV 295
Query: 322 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTT 381
A A++ AGL + DIDL+EINEAFA +Y +LGLDPE +N+ GGA+AIGHPLG T
Sbjct: 296 PASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGAT 355
Query: 382 GARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
GAR V TL +++ +G+D +GV ++C+G G G A V ER
Sbjct: 356 GARIVGTLARQLQIKGKD--YGVATLCVGGGQGGAVVLER 393
>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional.
Length = 404
Score = 306 bits (785), Expect = e-100
Identities = 157/409 (38%), Positives = 225/409 (55%), Gaps = 47/409 (11%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
D VI RT + + G FKD ++L A V++A++E+T +DP+ + D++ G P
Sbjct: 3 DAVICEPVRTPVGRFG-GAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGY-PNG 60
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI----------- 159
+ + R+AA AG P TVP ++R+C SGLQAV A ++ G D+
Sbjct: 61 EAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSN 120
Query: 160 --------------GSVNPK---VKAFEQAQNCLLP----MGVTSENVAHRFGVTRKEQD 198
G V + E A P M T+EN+ +G++R+EQD
Sbjct: 121 VEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQD 180
Query: 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 258
AV SH++A AA AG+F DEI+PV V + GD P + D+ R +T++ LAK
Sbjct: 181 ALAVRSHQRAVAAQEAGRFDDEIVPVT---VPQRKGD--PTVVDRDEHPRADTTLESLAK 235
Query: 259 LKPVFKK---DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI 315
L+P+ K + T TAGN+S +D A A L+ A GL L ++A GV+P+
Sbjct: 236 LRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSR 295
Query: 316 MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGAL 372
MG+GP A A+ AGL LDDIDL E+NEAFA+Q + + G D E++NVNG +
Sbjct: 296 MGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGI 355
Query: 373 AIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
++GHP+G TG R +ATLL E++R R R+G+ +MCIG G G AAVFER
Sbjct: 356 SLGHPVGATGGRILATLLRELQR--RQARYGLETMCIGGGQGLAAVFER 402
>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism].
Length = 392
Score = 303 bits (779), Expect = e-100
Identities = 153/405 (37%), Positives = 211/405 (52%), Gaps = 46/405 (11%)
Query: 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT--NVDPSEVGDIVVGTVL 106
DV IV A RT K G + + L A ++ A +E+ +VD ++V D+++G VL
Sbjct: 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVL 60
Query: 107 APGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI------- 159
G Q + R AA AG P +VP TVNR C+SGL AV A AI +G D+
Sbjct: 61 QAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVE 120
Query: 160 ----------------GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 203
+V+P + MG+T+E A R+G++R++QD+ AV
Sbjct: 121 KMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEVAVK 180
Query: 204 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTS-VSE-LAKLKP 261
SH+ AAA AG F DEI P D + D R + S S+ A L P
Sbjct: 181 SHKNAAANPKAGFF-DEITPE----------DVLNSPVVADPLRRLDCSPTSDGAAALVP 229
Query: 262 VFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGP 320
F++ GT TAGN+S ++DGA A+LLM S A GL L R +A GVDP+IM GP
Sbjct: 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGP 288
Query: 321 AVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLG 379
A+ A+ AGL L+D+ L E EAFA+ + LG P +N +GGA+A+GHP+G
Sbjct: 289 VAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDLP--VNPSGGAIALGHPIG 346
Query: 380 TTGARCVATLLHEMKRRG--RDCRFGVISMCIG-TGMGAAAVFER 421
TGAR + L +++ RG R G+ ++CIG G G AAV ER
Sbjct: 347 ATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGVAAVLER 391
>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 295 bits (756), Expect = 1e-96
Identities = 162/400 (40%), Positives = 236/400 (59%), Gaps = 37/400 (9%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVVIVAA RTA+ S +G + +L A V++ ++E+T +DP++V ++++G VL G+
Sbjct: 3 DVVIVAATRTAI-GSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI--------GSV 162
+ + R AA AG P +VP T+N+ C SGL+A+ A AI+ G ++ S+
Sbjct: 62 GQ-NPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSL 120
Query: 163 NPKV---------KAFEQAQNCLLP-----------MGVTSENVAHRFGVTRKEQDQAAV 202
P V Q + ++ MG+T+EN+ ++G++R+ QD A
Sbjct: 121 APYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAA 180
Query: 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 262
S +KA AA AG+F DEI P+ ++ + G+ P+ + D+ R T+ LAKLKP
Sbjct: 181 ASQQKAVAAIEAGRFDDEITPI---LIPQRKGE--PLAFATDEQPRAGTTAESLAKLKPA 235
Query: 263 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAV 322
FKKDG+ TAGN+S ++DGA AVLLM + A GLP+L +A GVDPAIMG+GP
Sbjct: 236 FKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVS 295
Query: 323 AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTG 382
A + AG L ++DL E NEAFA+Q + +LG D K+NVNGGA+A+GHP+G +G
Sbjct: 296 ATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASG 355
Query: 383 ARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 422
R + TLLHEM R RD + G+ ++CIG G G A ER
Sbjct: 356 CRVLVTLLHEMIR--RDAKKGLATLCIGGGQGVALAIERD 393
>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA. This
subunit of the FadBA complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit. This protein is almost always located
adjacent to FadB (TIGR02437). The FadBA complex is the
major complex active for beta-oxidation of fatty acids
in E. coli [Fatty acid and phospholipid metabolism,
Degradation].
Length = 385
Score = 285 bits (731), Expect = 6e-93
Identities = 166/391 (42%), Positives = 217/391 (55%), Gaps = 27/391 (6%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPG 109
DVVIV RT + +SK G F++T +DL A ++ ++ + VDP+EV DI G V
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---------- 159
Q + R AA A P T TVNR C S +QA+ D A AI G D+
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 160 -----GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 214
V+ MG+T+E + G++R++QD A SH +A AAT
Sbjct: 121 HVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHARAHAATQE 180
Query: 215 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK-KDGTTTAGN 273
GKFK+EIIP D G K D+ IRP T+V LA L+P F K+GT TAG
Sbjct: 181 GKFKNEIIPTQGHDAD---GFLK--QFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGT 235
Query: 274 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGL 333
SS +SDGA A+L+M A GL R+ A G DP+IMG GP A A+K AGL
Sbjct: 236 SSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGL 295
Query: 334 QLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGALAIGHPLGTTGARCVATLL 390
+ DID+FE+NEAFA+Q + C LGL EK+N+NGGA+A+GHPLG +GAR TLL
Sbjct: 296 SISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLL 355
Query: 391 HEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+ M++ +D FG+ +MCIG G G A VFER
Sbjct: 356 NLMEQ--KDATFGLATMCIGLGQGIATVFER 384
>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated.
Length = 401
Score = 284 bits (728), Expect = 3e-92
Identities = 161/397 (40%), Positives = 215/397 (54%), Gaps = 58/397 (14%)
Query: 68 GGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126
G DDL A LKA++ + VD V D++ G G + RM+A AG P
Sbjct: 19 GALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLP 78
Query: 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAG------------------------------- 155
+VP T+NR C SG+ AV A AIKAG
Sbjct: 79 VSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQA 138
Query: 156 -FYD--IG--SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 210
+D IG VNP +KA Q + M T+ENVA + ++R +QD A+ S ++AAA
Sbjct: 139 EIFDTTIGWRFVNPLMKA----QYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAA 194
Query: 211 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTT 270
A AAG +EI+PV + K GD PV + D+ RP T++ LAKLKPVF+ DGT T
Sbjct: 195 AQAAGFLAEEIVPVT---IPQKKGD--PVVVDRDEHPRPETTLEALAKLKPVFRPDGTVT 249
Query: 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLP----ILGVFRTFAAVGVDPAIMGVGPAVAIPA 326
AGN+S V+DGA A+LL + A + GL ILG A GV+P IMG+GPA A
Sbjct: 250 AGNASGVNDGAAALLLASEAAAKKHGLTPRARILG----MATAGVEPRIMGIGPAPATRK 305
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGALAIGHPLGTTGAR 384
+ GL +D D+ E+NEAFA+Q + +LGL D ++N NGGA+A+GHPLG +GAR
Sbjct: 306 LLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGAR 365
Query: 385 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
V T LH+++R G R+ + +MCIG G G A ER
Sbjct: 366 LVLTALHQLERTGG--RYALCTMCIGVGQGIALAIER 400
>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase. Members of this family
are designated beta-ketoadipyl CoA thiolase, an enzyme
that acts at the end of pathways for the degradation of
protocatechuate (from benzoate and related compounds)
and of phenylacetic acid.
Length = 400
Score = 276 bits (708), Expect = 3e-89
Identities = 156/410 (38%), Positives = 215/410 (52%), Gaps = 51/410 (12%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
+ I A RT + + G DDL A +KA++ + +D + + D++ G G
Sbjct: 2 EAYICDAIRTPIGRYG-GSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAG 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYD----------- 158
+ RMAA AG P +VP TVNR C SGL A+ A AIKAG D
Sbjct: 61 EDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMS 120
Query: 159 -----------------------IG--SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 193
IG +NP +KA + M T+ENVA FG++
Sbjct: 121 RAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKA----LYGVDSMPETAENVAEEFGIS 176
Query: 194 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSV 253
R++QD A+ S ++ AAA A+G F +EI+PV + K G+ P + D+ RP T++
Sbjct: 177 REDQDAFALRSQQRTAAAQASGFFAEEIVPVV---IPQKKGE--PTVVDQDEHPRPETTL 231
Query: 254 SELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP 313
LAKLKPV + DGT TAGN+S V+DGA A+LL R GL A GV+P
Sbjct: 232 EGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEP 291
Query: 314 AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGA 371
IMG+GP A + AGL +D D+ E+NEAFA+Q + +LGL D ++N NGGA
Sbjct: 292 RIMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGGA 351
Query: 372 LAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+A+GHPLG +GAR V T L +++R G R+ + +MCIG G G A ER
Sbjct: 352 IALGHPLGASGARLVLTALRQLERSGG--RYALCTMCIGVGQGIALAIER 399
>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional.
Length = 406
Score = 275 bits (706), Expect = 6e-89
Identities = 156/417 (37%), Positives = 224/417 (53%), Gaps = 61/417 (14%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
+ VIV+ R+ + ++ +G KD PDDL A +++A ++K +DP+++ D+++G L G
Sbjct: 3 EAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGG 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---------- 159
Q + R+ A G+ +P TVNR CSS LQ AIKAG D+
Sbjct: 63 EQGFNMARVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVS 121
Query: 160 -----------GSVNPKVKAFEQAQ-------------------NCLLP-----MGVTSE 184
+ NP F +AQ + LLP MG T+E
Sbjct: 122 RFAKGNSDSLPDTKNP---LFAEAQARTAARAEGGAEAWHDPREDGLLPDVYIAMGQTAE 178
Query: 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 244
NVA G++R+EQD+ V S +A A A G F+ EI PV +S D
Sbjct: 179 NVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLP---------DGTVVSTD 229
Query: 245 DGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFR 304
DG R T+ ++++LKPVF+ DGT TAGN+ ++DGA AV++M + A GL L
Sbjct: 230 DGPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIV 289
Query: 305 TFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK 364
+ G+ P IMG+GP A A+ AG+ +DDIDL EINEAFA+Q + +LG+D +K
Sbjct: 290 STGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDK 349
Query: 365 INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+NV+GGA+A+GHP G TGAR TLL+ + + D FG+ +MC+G G G A V ER
Sbjct: 350 LNVSGGAIALGHPFGMTGARITTTLLNNL--QTHDKTFGLETMCVGGGQGMAMVLER 404
>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated.
Length = 402
Score = 270 bits (694), Expect = 5e-87
Identities = 150/414 (36%), Positives = 216/414 (52%), Gaps = 58/414 (14%)
Query: 51 DVVIVAAYRTALCKSKRGG-FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+ I A RT K K+ G + P L A +L+A+ ++ +D + V D+V+G V G
Sbjct: 3 EAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVG 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYD----------- 158
Q A R A AG PETVP +NR C+SGL+AV AA +++G+ D
Sbjct: 63 DQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMS 122
Query: 159 ---IGS------VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAA 209
+GS ++P +P G++++ +A ++G +R++ D AV+S ++AA
Sbjct: 123 RVPMGSDGGAWAMDPST----NFPTYFVPQGISADLIATKYGFSREDVDAYAVESQQRAA 178
Query: 210 AATAAGKFKDEIIPVATKIVDPKTGDEKPVTI-SVDDGIRPNTSVSELAKLKPVFKKDGT 268
AA A G F ++PV D+ +TI D+ +RP T++ LAKLKP F G
Sbjct: 179 AAWAEGYFAKSVVPVK---------DQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGE 229
Query: 269 T---------------------TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFA 307
AGNSS + DGA AVL+ GL A
Sbjct: 230 MGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATA 289
Query: 308 AVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINV 367
+G DP IM GP A A+ AGL +DDIDLFE+NEAFAS + L + +K+NV
Sbjct: 290 TIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNV 349
Query: 368 NGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
NGGA+A+GHPLG TGA + T+L E++RRG+ R +I++C+G GMG A + ER
Sbjct: 350 NGGAIAMGHPLGATGAMILGTVLDELERRGK--RTALITLCVGGGMGIATIIER 401
>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 268 bits (688), Expect = 2e-86
Identities = 150/402 (37%), Positives = 215/402 (53%), Gaps = 49/402 (12%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS-Q 111
VIV+A RT K G KD +L +K +E+ NV +V ++++GTVL G Q
Sbjct: 5 VIVSAARTPFGKFG-GSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQ 63
Query: 112 RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI---GSVN----- 163
S R AA AG P V TVN+ C+SGL+AV I+AG + G +
Sbjct: 64 IPS--RQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNA 121
Query: 164 ----PKVK---------------------AFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 198
P + AF MGV VA G++R+ QD
Sbjct: 122 PYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVH-----MGVYGGEVAKELGISREAQD 176
Query: 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 258
+ A SH++A +A G+F++EI+PV + + GD P+ ++ D+ R +T++ +LAK
Sbjct: 177 EWAYRSHQRAVSAHEEGRFEEEIVPVT---IPQRKGD--PIVVAKDEAPRKDTTIEKLAK 231
Query: 259 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV 318
LKPVF K GT TAGN+ V+DGA A++LM A ++G L A+ V+
Sbjct: 232 LKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPR 291
Query: 319 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPL 378
P AI A ++ G ++DIDLFEINEAFA+ + G+DPEK+NVNGGA+A+GHP+
Sbjct: 292 TPGYAINALLEKTGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPI 351
Query: 379 GTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
G +GAR + TL+HE+KRRG G+ ++C G G G A + E
Sbjct: 352 GASGARIIVTLIHELKRRGGG--IGIAAICSGGGQGDAVLIE 391
>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 262
Score = 262 bits (671), Expect = 1e-85
Identities = 115/269 (42%), Positives = 154/269 (57%), Gaps = 36/269 (13%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVVIV+A RT + S G KD DL A +KA +E+ V P +V ++++G VL G
Sbjct: 1 DVVIVSAARTPI-GSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGE 59
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG--------SV 162
+ R AA AG P++VP T+N+ C SGL+AVA A AI+AG DI S
Sbjct: 60 G-QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSN 118
Query: 163 NP--------------------KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 202
P +K L+ MG+T+ENVA ++G++R+EQD+ A+
Sbjct: 119 APYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFAL 178
Query: 203 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 262
S +KAAAA AGKFKDEI+PV K KP+ + D+GIRP T++ LAKLKP
Sbjct: 179 RSQQKAAAAQKAGKFKDEIVPVTI-----KGRKGKPLVVDKDEGIRPGTTLESLAKLKPA 233
Query: 263 FKKD-GTTTAGNSSQVSDGAGAVLLMKRS 290
F K+ GT TAGN+S ++DGA AVLLM S
Sbjct: 234 FDKENGTVTAGNASGLNDGAAAVLLMSES 262
>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional.
Length = 401
Score = 265 bits (678), Expect = 9e-85
Identities = 155/407 (38%), Positives = 216/407 (53%), Gaps = 46/407 (11%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
D I R+ + G PDDL A V++ ++EK+ ++ D+++G G
Sbjct: 3 DAYIYDGLRSPFGRHA-GALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGE 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG--------------- 155
+ R A AG P TVP +TVNR C+SGL AV D A AI G
Sbjct: 62 DSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSR 121
Query: 156 -----------------FYD--IGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 196
+D IG+ P K Q N +P T +NVA FG++R++
Sbjct: 122 APFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPE--TGDNVAAEFGISRED 179
Query: 197 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 256
D+ A S K AA G F DEI P+ P+ P ++ D+ RP+++V L
Sbjct: 180 ADRFAAQSQAKYQAAKEEGFFADEITPIEV----PQGRKLPPKLVAEDEHPRPSSTVEAL 235
Query: 257 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM 316
KLKP+F+ G TAGN+S ++DGA A+L+ R+ + GL + + AA GV+P IM
Sbjct: 236 TKLKPLFE-GGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIM 294
Query: 317 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGALAI 374
G+GP AI A+ AGL LDD+D+ EINEAFASQ + C LG+ D ++N NGGA+A+
Sbjct: 295 GIGPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAV 354
Query: 375 GHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
GHPLG +GAR T E++RRG+ R+ V+S+CIG G G A V ER
Sbjct: 355 GHPLGASGARLALTAARELQRRGK--RYAVVSLCIGVGQGLAMVIER 399
>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional.
Length = 382
Score = 261 bits (670), Expect = 8e-84
Identities = 147/395 (37%), Positives = 208/395 (52%), Gaps = 46/395 (11%)
Query: 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA 113
IV A RT + K ++GG +P DL A VLK ++++T +DP+ V D++ G V G Q
Sbjct: 6 IVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAG 64
Query: 114 SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI----GSVNPKVKAF 169
+ R + AG PE VP TV+RQC S QA+ A A+ +G D+ G N
Sbjct: 65 NIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPI 124
Query: 170 EQAQNCLLPMGVT-----SENVAHRFG------------------VTRKEQDQAAVDSHR 206
A +G T S+ HR+G ++R+E ++ A++SHR
Sbjct: 125 SSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESHR 184
Query: 207 KAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 266
+A AA AG+F +EI+PV ++VD+G R TS+ ++A LKP+ +
Sbjct: 185 RAFAAIRAGRFDNEIVPVG--------------GVTVDEGPR-ETSLEKMAGLKPLV-EG 228
Query: 267 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPA 326
G TA +SQ+SDGA AVLL R GL + G DP M P A
Sbjct: 229 GRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRY 288
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCV 386
A++ GL +DDID+ EINEAFA + + G DP K+N NGGA+A+GHPLG TGA+ +
Sbjct: 289 ALEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLM 348
Query: 387 ATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
TLLHE++R G R+G+ +MC G G + ER
Sbjct: 349 TTLLHELERTGG--RYGLQTMCEGGGTANVTIIER 381
>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional.
Length = 400
Score = 259 bits (663), Expect = 2e-82
Identities = 156/410 (38%), Positives = 213/410 (51%), Gaps = 52/410 (12%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPG 109
+ I A RT + + G DDL A LKA++E+ +VD + + D++ G G
Sbjct: 3 EAFICDAIRTPIGRYG-GALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAG 61
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG-------------- 155
+ RM+ AG P VP T+NR C SG+ AV A AIK+G
Sbjct: 62 EDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMS 121
Query: 156 ------------------FYD--IG--SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 193
+D IG VNP +K + M T+ENVA + V+
Sbjct: 122 RAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQ----LYGVDSMPETAENVATDYNVS 177
Query: 194 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSV 253
R +QD A+ S +KAA A A G EI+PV + K GD P+ +S D+ R T++
Sbjct: 178 RADQDAFALRSQQKAARAQADGTLAQEIVPVT---IPQKKGD--PLVVSRDEHPRE-TTL 231
Query: 254 SELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP 313
LAKLK V + DGT TAGN+S V+DGA A+LL + A R GL A GV+P
Sbjct: 232 EALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEP 291
Query: 314 AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGA 371
+MG+GPA A + G+ LD D+ E+NEAFASQ + +LGL D ++N NGGA
Sbjct: 292 RVMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGA 351
Query: 372 LAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
+A+GHPLG +GAR V T L++++R G RF + +MCIG G G A ER
Sbjct: 352 IALGHPLGASGARLVTTALYQLERTGG--RFALCTMCIGVGQGIAIAIER 399
>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional.
Length = 387
Score = 252 bits (646), Expect = 4e-80
Identities = 144/395 (36%), Positives = 205/395 (51%), Gaps = 39/395 (9%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIV A RT + K + G + +LL V +AV+++ +DP +V ++ G V G Q
Sbjct: 5 VIVEAVRTPIGK-RNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQS 63
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQA 172
+ R A +AG P V T++ QC S QA VA I AG D+G + V+A +
Sbjct: 64 NNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVG-IACGVEAMSRV 122
Query: 173 QNCLLPMG-----------------------VTSENVAHRFGVTRKEQDQAAVDSHRKAA 209
P+G +E +A R G+TR++ D + S R+AA
Sbjct: 123 -----PLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGLRSQRRAA 177
Query: 210 AATAAGKFKDEIIPVATKIVDPK---TGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 266
A A G+F EI PV ++D + TG+ + VT D G+R +T++ LA LKPV +
Sbjct: 178 QAWAEGRFDREISPVQAPVLDEEGQPTGETRLVT--RDQGLR-DTTMEGLAGLKPVLE-G 233
Query: 267 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPA 326
G TAG SSQ+SDGA AVL M A GL A VG +P GP A
Sbjct: 234 GIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAK 293
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCV 386
++ AG+++ DIDL EINEAFAS + D +K+NVNGGA+A+GHP+G+TGAR +
Sbjct: 294 VLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLI 353
Query: 387 ATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
T LHE++R + +I+MC G + + ER
Sbjct: 354 TTALHELERTDK--STALITMCAGGALSTGTIIER 386
>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 251 bits (642), Expect = 1e-79
Identities = 140/396 (35%), Positives = 224/396 (56%), Gaps = 37/396 (9%)
Query: 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ 111
V I A RTA S G T L A ++K +++ + +DP+ V ++++G V+ GS
Sbjct: 5 VYITHAKRTAF-GSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSG 63
Query: 112 RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI------------ 159
+ + R +AG P+ VP T+N+ C SGL++VA A +I G +I
Sbjct: 64 Q-NPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG 122
Query: 160 --------GSVNPKVKAFEQAQNCLLP-------MGVTSENVAHRFGVTRKEQDQAAVDS 204
G+ +K + Q L MG+T+EN++ +F ++R+EQD+ A+ S
Sbjct: 123 MHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEFALSS 182
Query: 205 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 264
H+KAA A AG FKDEI+P+ I + D+ +RP+TS+ L+KL+P F
Sbjct: 183 HKKAAKAQLAGIFKDEILPIEVTI------KKTTSLFDHDETVRPDTSLEILSKLRPAFD 236
Query: 265 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAI 324
K+G TAGN+S ++DGA ++++ + L L ++A+ GVDP+IMG P A
Sbjct: 237 KNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPAS 296
Query: 325 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGAR 384
A+ AG ++D+++ E+NEAFA+Q +Y ++ D EK+N+NGGA+AIGHP+G +G R
Sbjct: 297 QKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGR 356
Query: 385 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
+ TL+H ++R + G++++CIG GMG A E
Sbjct: 357 VLITLIHGLRR--AKAKKGLVTLCIGGGMGMAMCVE 390
>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional.
Length = 426
Score = 251 bits (644), Expect = 3e-79
Identities = 156/437 (35%), Positives = 223/437 (51%), Gaps = 79/437 (18%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
V IV RT K+ RGG DL +A++ + P ++ ++++G P
Sbjct: 4 PVYIVDGARTPFLKA-RGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCA-MPSP 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK----------------- 153
A+ R+ A G E VP TV R C+SG+QA+ AA I
Sbjct: 62 DEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSH 121
Query: 154 -------------AGFYDIGSVNPKVKAFEQAQN-----------------CLLPMGVTS 183
AG+Y S+ K+ A + + L MG T+
Sbjct: 122 APLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMGQTA 181
Query: 184 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISV 243
E +AHRFG+TR++ D A SH++ AAA A G+ K E++P+ + D K D
Sbjct: 182 EVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFDR--DGKFYDH------- 231
Query: 244 DDGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV 302
DDG+RP++S+ +LAKLKP F + G TAGNSSQ++DGA +LL + GLP LG
Sbjct: 232 DDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGR 291
Query: 303 FRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV---------- 352
+DP+ MG+GP A ++ GL L+D+DL+EINEAFA+Q +
Sbjct: 292 IVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEE 351
Query: 353 YCRNKLGL-------DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 405
YCR +LGL D E++NV+GGA+A+GHP+G +GAR V LLH +KRRG + G+
Sbjct: 352 YCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKRRG--TKRGIA 409
Query: 406 SMCIGTGMGAAAVFERG 422
++CIG G G A + ER
Sbjct: 410 AICIGGGQGGAMLLERV 426
>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase.
Length = 394
Score = 250 bits (640), Expect = 4e-79
Identities = 143/411 (34%), Positives = 211/411 (51%), Gaps = 60/411 (14%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVL-----KAVIEKTNVDPSEVGDIVVGTV 105
DV IV RT + GGF + L A L +A +E+ VDP+ V ++ G V
Sbjct: 2 DVCIVGVARTPI-----GGFLGSL-SSLSATELGSIAIQAALERAGVDPALVQEVFFGNV 55
Query: 106 LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPK 165
L+ +A R AA AG P + TVN+ C+SG++AV A +I+ G D+
Sbjct: 56 LSANLGQAP-ARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDV------ 108
Query: 166 VKA--FEQAQNC--LLP------------------------------MGVTSENVAHRFG 191
V A E N LP MGV +E A ++
Sbjct: 109 VVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYS 168
Query: 192 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNT 251
++R+EQD A+ S+ +A AA AG F EI+PV P V + D+G+
Sbjct: 169 ISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEV----PGGRGRPSVIVDKDEGLGKFD 224
Query: 252 SVSELAKLKPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG 310
+L KL+P FK+D G+ TAGN+S +SDGA A++L+ A+ GL ++ R +A
Sbjct: 225 PA-KLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAA 283
Query: 311 VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGG 370
P + PA+AIP A+K AGL+ +D +EINEAF+ + + LGLDPEK+NV+GG
Sbjct: 284 QAPELFTTAPALAIPKALKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGG 343
Query: 371 ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
A+++GHP+G +GAR + TLL ++ + ++GV +C G G +A V E
Sbjct: 344 AVSLGHPIGCSGARILVTLLGVLRSKNG--KYGVAGICNGGGGASAIVVEL 392
>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional.
Length = 390
Score = 246 bits (631), Expect = 8e-78
Identities = 143/405 (35%), Positives = 216/405 (53%), Gaps = 58/405 (14%)
Query: 54 IVAAYRTALCKSKRGG-FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
IVAA RTA ++GG +P DL A VL A+++++ DP+ + D+++G V G Q
Sbjct: 6 IVAAARTA--GGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQA 63
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQA 172
+ R A + PE+VP +++RQC S QA+ A A+ +G DI V A
Sbjct: 64 TNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDI------VIAAGVE 117
Query: 173 QNCLLPMGVTS-------------------------------ENVAHRFGVTRKEQDQAA 201
+PMG S E +A ++G+++ + D+ A
Sbjct: 118 SMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFA 177
Query: 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261
+ SH++A AAT AGKFK EI+P+ + D +VD+GIR + ++ +A +K
Sbjct: 178 LQSHQRAIAATQAGKFKAEIVPL-----EITRADGSGEMHTVDEGIRFDATLEGIAGVKL 232
Query: 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV-----FRTFAAVGVDPAIM 316
+ + G TA +SQ+ DGA V+ V +GL LGV +G DP IM
Sbjct: 233 I-AEGGRLTAATASQICDGASGVM-----VVNERGLKALGVKPLARIHHMTVIGGDPVIM 286
Query: 317 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 376
P A A+K AG+++DDIDL+E+NEAFAS + G DPE++NVNGGA+A+GH
Sbjct: 287 LEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAIALGH 346
Query: 377 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 421
PLG +G + + TL+H +K+RG+ R+G+ +MC G GM + ER
Sbjct: 347 PLGASGTKLMTTLVHALKQRGK--RYGLQTMCEGGGMANVTIVER 389
>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 428
Score = 243 bits (623), Expect = 3e-76
Identities = 148/436 (33%), Positives = 210/436 (48%), Gaps = 75/436 (17%)
Query: 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAP 108
GD + IV+ RT K + F DL V+ ++ ++ +DP + +V G V+
Sbjct: 4 GDRIAIVSGLRTPFAK-QATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVV-Q 61
Query: 109 GSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-------- 160
+ + R G +V+R C++ QAVA+VA +I AG DIG
Sbjct: 62 MPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSS 121
Query: 161 SVNP---------------KVKAFEQAQNC--------LLP-------------MGVTSE 184
SV P K + Q LLP MG T+E
Sbjct: 122 SVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAE 181
Query: 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 244
+A +G++R+EQD A SH+ AA A A GK DE V T V P + D
Sbjct: 182 QMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDE---VMTAHVPPYKQ-----PLEED 233
Query: 245 DGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVF 303
+ IR ++++ + AKL+P F +K GT TA NS+ ++DGA AVLLM S A GL LG
Sbjct: 234 NNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYL 293
Query: 304 RTFAAVGVDP-AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV---------- 352
R++A +D M +GPA A P A++ AGL L D+ L +++EAFA+Q +
Sbjct: 294 RSYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASER 353
Query: 353 YCRNKLG-------LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 405
+ R KLG +D K NV GG++A GHP TGAR + LHE++RRG G+
Sbjct: 354 FAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGG--LGLT 411
Query: 406 SMCIGTGMGAAAVFER 421
+ C G+GAA V E
Sbjct: 412 TACAAGGLGAAMVLEV 427
>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional.
Length = 361
Score = 235 bits (600), Expect = 1e-73
Identities = 136/380 (35%), Positives = 202/380 (53%), Gaps = 37/380 (9%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIV A RT + K K G KD L AP+L + + E+ D+++G V+ PG
Sbjct: 4 VIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFLSKGM---EREIDDVILGNVVGPGGNV 59
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG---FYDIGSVNPKVKAF 169
A R++A AG +P T++RQC +GL+A+ I+ G Y G V +
Sbjct: 60 A---RLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP 116
Query: 170 EQAQNCLLP-------MGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEII 222
Q + P MGV +E VA R+ +TR+ QD+ A S+++ A G +EI+
Sbjct: 117 FQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEIL 176
Query: 223 PVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL-AKLKPVFKKDGTTTAGNSSQVSDGA 281
+ D+ I+ + + + KP F +GT TAGNS V+DGA
Sbjct: 177 SFNGLL---------------DESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGA 221
Query: 282 GAVLLMKRSVAMRKGL-PILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340
AVL+M+ A + G P+L R+ A VGVDP + G GP A+ + ++++DID
Sbjct: 222 CAVLVMEEGQARKLGYKPVLRFVRS-AVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDY 280
Query: 341 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC 400
FEINEAFAS+ V C +L + EK+NVNGGA+A+GHP G +GA V L ++ KR D
Sbjct: 281 FEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKR--EDM 338
Query: 401 RFGVISMCIGTGMGAAAVFE 420
++G+ ++ IG G+G A +FE
Sbjct: 339 KYGIATLGIGGGIGLALLFE 358
>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional.
Length = 417
Score = 211 bits (540), Expect = 4e-64
Identities = 140/432 (32%), Positives = 203/432 (46%), Gaps = 79/432 (18%)
Query: 51 DVVIVAAYRT--ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAP 108
+ I+ A RT + K +G +P L A VLKA+ E+ ++ ++V DI+ T
Sbjct: 3 EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQR 62
Query: 109 GSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYD---------- 158
G Q RMAA AG+ T++R C G+ +V AA I +G D
Sbjct: 63 GKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMM 122
Query: 159 -------------------IGSVNPKVKAFE-QAQNCLLPMGVTSENVAHRFGVTRKEQD 198
+GS N +++A Q+ GV + +A G+TR+ D
Sbjct: 123 SYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQ-----GVCGDAIATMEGITREALD 177
Query: 199 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 258
++S R+AA A G+F ++PV D+ V + ++ RP T+ LA
Sbjct: 178 ALGLESQRRAARAIKEGRFDKSLVPV--------YRDDGSVALDHEEFPRPQTTAEGLAA 229
Query: 259 LKPVFKK-------DGTTT-------------------AGNSSQVSDGAGAVLLMKRSVA 292
LKP F D TT AGNSS V DGA A+LL ++ A
Sbjct: 230 LKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYA 289
Query: 293 MRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF---AS 349
+ GL A +G DP +M P A + AGL DDIDL+EINEAF A
Sbjct: 290 EKHGLKPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAE 349
Query: 350 QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCI 409
+F+ L LD +K+NVNGGA+A+GHP+G TG+ + T+L E++RRG + G+++MC
Sbjct: 350 KFI---RDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERRGL--KRGLVTMCA 404
Query: 410 GTGMGAAAVFER 421
GM A + ER
Sbjct: 405 AGGMAPAIIIER 416
>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional.
Length = 427
Score = 211 bits (540), Expect = 7e-64
Identities = 145/445 (32%), Positives = 199/445 (44%), Gaps = 99/445 (22%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
V I+ R +S G + D D+L L ++++ + +G++V G VL
Sbjct: 8 RVAILGGNRIPFARSN-GAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR 66
Query: 111 --QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG-------- 160
EC + + + P T P + + C +GL+A VA I G D G
Sbjct: 67 DFNLTRECVLGSALS--PYT-PAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTT 123
Query: 161 -----SVNP-----------------KVKAF----------EQAQN----CLLPMGVTSE 184
+VN ++KA E +N L MG +
Sbjct: 124 SDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLSMGEHAA 183
Query: 185 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 244
A +G++R+ QD+ A SH+ AAA G F D I P G + D
Sbjct: 184 ITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL--------GLTR------D 229
Query: 245 DGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV 302
+ +RP++S+ +LAKLKPVF K T TAGNS+ ++DGA VLL A GLP+L
Sbjct: 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAY 289
Query: 303 FRTF--AAV----GVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV---- 352
AAV G + +M PA A+P + GL L D D +EI+EAFASQ +
Sbjct: 290 LVDAETAAVDFVHGKEGLLMA--PAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLK 347
Query: 353 ------YCRNKLGL-------DPEKINVNGGALAIGHPLGTTGARCVATL---LHEMKRR 396
YCR +LGL D K+NVNG +LA GHP TG R VATL L E K
Sbjct: 348 AWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAE-KGS 406
Query: 397 GRDCRFGVISMCIGTGMGAAAVFER 421
GR G+IS+C G G A+ ER
Sbjct: 407 GR----GLISICAAGGQGVTAILER 427
>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional.
Length = 397
Score = 206 bits (526), Expect = 3e-62
Identities = 137/405 (33%), Positives = 194/405 (47%), Gaps = 40/405 (9%)
Query: 45 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104
T+V D +VI +A RT + + +G F L A + A +E+ + P ++ ++V+G
Sbjct: 2 TAVDQDPIVIASAARTPMA-AFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGC 60
Query: 105 VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVN- 163
VL P Q + R AA AG P +V TVN+ C SG++A + AG D+
Sbjct: 61 VL-PAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGG 119
Query: 164 -----------PKVKA-----------------FEQAQNCLLPMGVTSENVAHRFGVTRK 195
PK + E A + MG +E A +G TR+
Sbjct: 120 MESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTRE 179
Query: 196 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE 255
QD A++S +A A G F EI PV V K GD I D+ + +
Sbjct: 180 AQDAFAIESLARAKRANEDGSFAWEIAPVT---VAGKKGD---TVIDRDEQPF-KANPEK 232
Query: 256 LAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI 315
+ LKP F K GT TA NSS +SDGA A+++M+ S A R GL L + P+
Sbjct: 233 IPTLKPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSK 292
Query: 316 MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIG 375
P AI + G + ++DLFEINEAFA + + GL EK+NVNGGA A+G
Sbjct: 293 FTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALG 352
Query: 376 HPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
HP+G +GAR + TL+ ++ RG + GV S+CIG G A E
Sbjct: 353 HPIGASGARILVTLIGALRARG--GKRGVASLCIGGGEATAMGIE 395
>gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 123
Score = 191 bits (488), Expect = 3e-60
Identities = 76/125 (60%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
Query: 297 LPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRN 356
L L R++A VGVDPAIMG+GPA AIP A+K AGL ++DIDLFEINEAFA+Q +
Sbjct: 1 LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAK 60
Query: 357 KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA 416
LG+DPEK+NVNGGA+A+GHPLG +GAR + TLLHE+KRRG ++G+ ++CIG G G A
Sbjct: 61 DLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGG--KYGLATLCIGGGQGVA 118
Query: 417 AVFER 421
+ ER
Sbjct: 119 MIIER 123
>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 194 bits (495), Expect = 6e-58
Identities = 129/408 (31%), Positives = 198/408 (48%), Gaps = 63/408 (15%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DV IV+A RTA+ K R F L +KAVI+ +DP+ V ++++G V+ G
Sbjct: 3 DVYIVSAKRTAIGKFGRS-FSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI----GSVNPKV 166
+ + AA++AG P V TVN C+SG+ AV A I G D+ G N
Sbjct: 62 GQ-NPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSN 120
Query: 167 KAFEQAQNCLLP----------------------------------MGVTSENVAHRFGV 192
F LLP MGV++E A ++G+
Sbjct: 121 APF------LLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGI 174
Query: 193 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTS 252
TR+ D+ +V S+ +A AT +G+F++EI+P + D+GIR T+
Sbjct: 175 TREMADEYSVQSYERAIRATESGEFRNEIVPFND--------------LDRDEGIR-KTT 219
Query: 253 VSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 312
+ +LAKL P F K+G TAGNS+Q+SDG A+++ GL + + + +D
Sbjct: 220 MEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLD 279
Query: 313 PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAL 372
P P A ++ +D DL E NEAF+ + R++L +D E+ NVNGGA+
Sbjct: 280 PLDFVEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAV 339
Query: 373 AIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 420
AIGHP+G +G+R + TL++ +K R + G+ ++C G G E
Sbjct: 340 AIGHPIGNSGSRIIVTLINALKT--RHMKTGLATLCHGGGGAHTLTLE 385
>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI. This
subunit of the FadJI complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit, and YfcY. This protein is almost always
located adjacent to FadJ (TIGR02440). The FadJI complex
is needed for anaerobic beta-oxidation of short-chain
fatty acids in E. coli [Fatty acid and phospholipid
metabolism, Degradation].
Length = 430
Score = 184 bits (469), Expect = 1e-53
Identities = 134/436 (30%), Positives = 202/436 (46%), Gaps = 77/436 (17%)
Query: 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLA- 107
G+ + IVA RT + + F DL V+ ++ ++ +DP + +V G V+
Sbjct: 6 GERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQM 64
Query: 108 PGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG------- 160
P + + R G +V R C++ Q+ +VA +I AG DIG
Sbjct: 65 PEAPNIA--REIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADS 122
Query: 161 -SVNP---------------KVKAFEQAQNCL---------------------LPMGVTS 183
SV P K + Q L MG T+
Sbjct: 123 SSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTA 182
Query: 184 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISV 243
E +A +G+TR EQD A SH A+ A GK E V T P ++ I+
Sbjct: 183 EQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGE---VMTAFPPPY---KQW--IAE 234
Query: 244 DDGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV 302
D+ IR N++++ AKL+P F +K G+ TA NS+ ++DGA AV+LM+ A G+ LG
Sbjct: 235 DNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGY 294
Query: 303 FRTFAAVGVDP-AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV--------- 352
R++A +D M +GP+ A P A++ AGL L D+ L +++EAFA+Q +
Sbjct: 295 IRSYAFTAIDVWQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASD 354
Query: 353 -YCRNKLG-------LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGV 404
+ + LG +D K NV GG++A GHP TGAR + L E+KRRG G+
Sbjct: 355 KFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKRRGGG--LGL 412
Query: 405 ISMCIGTGMGAAAVFE 420
+ C G+GAA + E
Sbjct: 413 NTACAAGGLGAAMILE 428
>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing
enzymes; In general, thiolases catalyze the reversible
thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and
acetyl-CoA, a 2-step reaction involving a covalent
intermediate formed with a catalytic cysteine. There are
2 functional different classes: thiolase-I
(3-ketoacyl-CoA thiolase) and thiolase-II
(acetoacetyl-CoA thiolase). Thiolase-I can cleave longer
fatty acid molecules and plays an important role in the
beta-oxidative degradation of fatty acids. Thiolase-II
has a high substrate specificity. Although it can cleave
acetoacyl-CoA, its main function is the synthesis of
acetoacyl-CoA from two molecules of acetyl-CoA, which
gives it importance in several biosynthetic pathways.
Length = 393
Score = 172 bits (436), Expect = 3e-49
Identities = 120/415 (28%), Positives = 171/415 (41%), Gaps = 72/415 (17%)
Query: 55 VAAYRTALCK--SKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
A TA K + G + + A + A +E V V + +G VL +
Sbjct: 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVL-GAGEG 59
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQA 172
+ + AA +AG + P +N C SGL+A+A I G
Sbjct: 60 QNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGD---------------- 103
Query: 173 QNCLLPMGV-----TSENVAHRFGV--------TRKEQDQAAVDSHRKAAAATAAGKFKD 219
NC+L G ++EN A + R D A+ A AA G+FKD
Sbjct: 104 ANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDGRFKD 163
Query: 220 EIIPVATKIVDPKTGDEKPVTISVDDGIR--PNTSVSELAKLKPVFKKDGTTTAGNSSQV 277
E K G + + D+ I+ S+ E+AKL+P F K+ TAGN+ +
Sbjct: 164 EFAKFGVK------GRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGL 217
Query: 278 SDGAGAVLLMKRSVAMRKGLPI-------LGVFRTFAAVGVDPA----IMGVGPAVAIPA 326
+DGA A +LM + A + GL L + A+ D + G GP A
Sbjct: 218 NDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARK 277
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK------------------INVN 368
A++ AGL + D+DL E ++AFA+ LGL PE IN N
Sbjct: 278 ALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPN 337
Query: 369 GGALAIGHPLGTTGARCVATLLHEMKRRGRDC---RFGVISMCIGTGMGAAAVFE 420
GGA+AIGHP+G +GA A L E+K G+ +CIG G GAA E
Sbjct: 338 GGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGAAMCIE 392
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that
catalyze a (decarboxylating or non-decarboxylating)
Claisen-like condensation reaction. Members are share
strong structural similarity, and are involved in the
synthesis and degradation of fatty acids, and the
production of polyketides, a diverse group of natural
products.
Length = 254
Score = 79.0 bits (195), Expect = 1e-16
Identities = 43/160 (26%), Positives = 61/160 (38%), Gaps = 12/160 (7%)
Query: 271 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD----PAIMGVGPAVAIPA 326
DGA A ++ A+R+G + AA PA+ G G A A
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 327 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK---INVNGGALAIGHPLGTTGA 383
A++ AGL DID E + LGLDP+ V+ + GHPLG G
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGL 213
Query: 384 RCVATLLHEMKR-----RGRDCRFGVISMCIGTGMGAAAV 418
+ LL ++ R+ R ++ G AA V
Sbjct: 214 AILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVV 253
Score = 34.7 bits (80), Expect = 0.060
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137
L + I + + ++VGT G + + A++ G P +VN+
Sbjct: 10 LGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQ-LAYHLGISG-GPAYSVNQA 67
Query: 138 CSSGLQAVADVAAAIKAGFYDI 159
C++GL A+A ++ G DI
Sbjct: 68 CATGLTALALAVQQVQNGKADI 89
>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol
carrier protein (SCP)-x isoform and related proteins;
SCP-2 has multiple roles in intracellular lipid
circulation and metabolism. The N-terminal presequence
in the SCP-x isoform represents a peroxisomal
3-ketacyl-Coa thiolase specific for branched-chain acyl
CoAs, which is proteolytically cleaved from the sterol
carrier protein.
Length = 375
Score = 70.8 bits (174), Expect = 2e-13
Identities = 90/403 (22%), Positives = 139/403 (34%), Gaps = 103/403 (25%)
Query: 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134
P +L A +A ++ ++P+++ +VVG Q +A Y G P V
Sbjct: 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAE-YLGLLG-KPATRV 73
Query: 135 NRQCSSGLQAVADVAAAIKAGFYDIG---------SVNPKVKAFEQAQNCLLPMGVTSEN 185
+SG AV AAAI +G D+ V +A +A +
Sbjct: 74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGG 133
Query: 186 V-------------AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPV----ATKI 228
+ HR+G TR++ + AV +HR AA A +F+ I + I
Sbjct: 134 LTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARNPYA-QFRKPITVEDVLNSRMI 192
Query: 229 VDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMK 288
DP + VSDGA AV+L
Sbjct: 193 ADP-------------------------------------LRLLDCCPVSDGAAAVVLAS 215
Query: 289 RSVAMRKGLP---ILGV-----FRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 340
A ILGV + + ++ +A A K AG+ DDID+
Sbjct: 216 EERARELTDRPVWILGVGAASDTPSLSERDDFLSLDAA--RLAARRAYKMAGITPDDIDV 273
Query: 341 FEINEAFASQ-FVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTT 381
E+ + F + + LG + +N +GG L+ GHPLG T
Sbjct: 274 AELYDCFTIAELLALED-LGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGAT 332
Query: 382 GARCVATLLHEMKRRG-----RDCRFGVISMCIGTGMGAAAVF 419
G + +++ R G+ IG G G+AAV
Sbjct: 333 GLAQAVEAVRQLRGEAGARQVPGARVGLAHN-IG-GTGSAAVV 373
>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid
metabolism / Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 412
Score = 47.6 bits (114), Expect = 7e-06
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAG 332
+GAGA++L + A+ +G I + PA G G A+ AA+ AG
Sbjct: 231 GEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAG 290
Query: 333 LQLDDID----------LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTG 382
L +DID + E+ A + V G + + V+ GH LG G
Sbjct: 291 LTPEDIDYINAHGTSTPANDKAESLAIKRV-----FGEHAKSLPVSSTKSLTGHTLGAAG 345
Query: 383 A 383
A
Sbjct: 346 A 346
Score = 29.2 bits (66), Expect = 4.3
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDI 159
P T C++G A+ D I+ G D+
Sbjct: 154 PNYTPVTACATGAHAIGDAVRLIRLGKADV 183
>gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 45.3 bits (108), Expect = 4e-05
Identities = 89/427 (20%), Positives = 146/427 (34%), Gaps = 107/427 (25%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLA--- 107
DV I+ +T K G D DL +E +D ++ + VG + A
Sbjct: 3 DVAIIGVGQT-----KFGELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLF 57
Query: 108 -----PGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDI--- 159
+ + A YAG R V C+SG A+ A+ +G D+
Sbjct: 58 VSQEHIAA-------LIADYAGLAPIPATR-VEAACASGGAALRQAYLAVASGEADVVLA 109
Query: 160 -------GSVNPK-VKAFEQAQNCL--LPMGVTSENVA--------HRFGVTRKEQDQAA 201
P +A +A + G T + H++G T ++ A
Sbjct: 110 AGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVA 169
Query: 202 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 261
V +H + A +F+ E I+V+ + + V++ KL
Sbjct: 170 VKNHYNGSKNPYA-QFQKE--------------------ITVEQVLN-SPPVADPLKLL- 206
Query: 262 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR---KGLPILGVFRT--FAAVGVDPAIM 316
+ S ++DGA AV+L A + I + A+
Sbjct: 207 -----------DCSPITDGAAAVILASEEKAKEYTDTPVWIKASGQASDTIALHDRKDFT 255
Query: 317 GVGPAV-AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK----------- 364
+ AV A A K AG++ DID+ E+++ F + LG +K
Sbjct: 256 TLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIAEILAYEDLGF-AKKGEGGKLAREGQ 314
Query: 365 --------INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGT----- 411
+N +GG A GHP+G TG ++ +++ R VI G
Sbjct: 315 TYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQVIGAGYGLTHNVG 374
Query: 412 GMGAAAV 418
G G AV
Sbjct: 375 GTGHTAV 381
>gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 44.6 bits (106), Expect = 7e-05
Identities = 41/135 (30%), Positives = 53/135 (39%), Gaps = 32/135 (23%)
Query: 275 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-------VDPAIMGVGPAVAIPAA 327
S VSDGA A++L A + FR A V DP GP A A
Sbjct: 213 SLVSDGAAALVLADAETARALQRAV--RFRARAHVNDFLPLSRRDPLAFE-GPRRAWQRA 269
Query: 328 VKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLDPE------------------KINV 367
+ AG+ LDD+ E ++ F A Y +GL P +N
Sbjct: 270 LAQAGVTLDDLSFVETHDCFTIAELIEY--EAMGLAPPGQGARAIREGWTAKDGKLPVNP 327
Query: 368 NGGALAIGHPLGTTG 382
+GG A GHP+G TG
Sbjct: 328 SGGLKAKGHPIGATG 342
>gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional.
Length = 403
Score = 40.8 bits (96), Expect = 0.001
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 37/144 (25%)
Query: 275 SQVSDGAGAVLLMK----RSVAMRKGLPI----------LGVFRTFAAVGVDPAIMGVGP 320
SQV+DG V+L R A + +P LG+ + DP ++ P
Sbjct: 220 SQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL---P 276
Query: 321 AV--AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE--------------- 363
V A+ A + AG+ LDD+D FE+++ F + +GL
Sbjct: 277 HVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIG 336
Query: 364 ---KINVNGGALAIGHPLGTTGAR 384
IN +GG + GHP+G +G R
Sbjct: 337 GRLPINPSGGLIGGGHPVGASGVR 360
Score = 32.4 bits (74), Expect = 0.51
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET---VPVRT 133
DL V+ + VD ++ + VG G A + + A A VP
Sbjct: 28 DLTREVVDGTLAAAGVDADDIEVVHVGN--FFGELFAGQGHLGAMPATVHPALWGVPASR 85
Query: 134 VNRQCSSGLQAVADVAAAIKAGFYDIGSV 162
C+SG A A ++AG YD+ V
Sbjct: 86 HEAACASGSVATLAAMADLRAGRYDVALV 114
>gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional.
Length = 385
Score = 39.8 bits (93), Expect = 0.002
Identities = 79/368 (21%), Positives = 130/368 (35%), Gaps = 89/368 (24%)
Query: 65 SKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMA---AF 121
SK G D +L +K + V +++ +VVG+ + R E A A
Sbjct: 11 SKFGRRDDVSVQELAWESIKEALNDAGVSQTDIELVVVGST----AYRGIELYPAPIVAE 66
Query: 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSVNPKVKAFEQAQNCLLPMGV 181
Y+G VP+R V C++GL A A+ +G D+ K E + L +G
Sbjct: 67 YSGLTGKVPLR-VEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGG 125
Query: 182 TSEN--------------------VAH--RFGVTRKEQDQAAVDSHRKAAAATAAGKFKD 219
N H +G T ++ +V +H+ A
Sbjct: 126 RGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGA---------- 175
Query: 220 EIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSD 279
++PK +KPVT V++ ++ +S KL +S +SD
Sbjct: 176 ---------MNPKAHFQKPVT--VEEVLKSRA-ISWPIKLL------------DSCPISD 211
Query: 280 GAGAVLLMKRSVAMRKGL--PI----LGVFRTFAAVGVDPAIMGVGPAV-AIPAAVKSAG 332
G+ + + P+ +G +A V +G A A A
Sbjct: 212 GSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAK 271
Query: 333 LQLDDIDLFEINEAFASQFVYCRNKLGL-------------DPEK-----INVNGGALAI 374
+ +DI++ +++AF + LG EK +N+ GG A
Sbjct: 272 VTPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAK 331
Query: 375 GHPLGTTG 382
GHPLG TG
Sbjct: 332 GHPLGATG 339
>gnl|CDD|181173 PRK07937, PRK07937, lipid-transfer protein; Provisional.
Length = 352
Score = 39.7 bits (93), Expect = 0.002
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 277 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG-----VGPAVAIPAAVKSA 331
++DGA AV+L A L + T ++ +G P+ A+ AA +
Sbjct: 204 ITDGAAAVVLAAGDRARE--LRERPAWITGIEHRIESPSLGARDLTRSPSTAL-AAEAAT 260
Query: 332 GLQLDDIDLFEINEAFASQFVYCRNKLGL-DPEKINVNGGALAIGHPLGTTG 382
G +D+ E++ F Q + R LGL D K+N +GGALA +P+ G
Sbjct: 261 GGDAGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAG 311
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III
(KASIII) initiates the elongation in type II fatty acid
synthase systems. It is found in bacteria and plants.
Elongation of fatty acids in the type II systems occurs
by Claisen condensation of malonyl-acyl carrier protein
(ACP) with acyl-ACP. KASIII initiates this process by
specifically using acetyl-CoA over acyl-CoA.
Length = 320
Score = 39.4 bits (93), Expect = 0.002
Identities = 45/161 (27%), Positives = 63/161 (39%), Gaps = 41/161 (25%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAV------AIPAAVKS- 330
SDG+GA LL + R A G DP ++ G V +P +++
Sbjct: 181 SDGSGADLLTIPAGGSR--------SPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEA 232
Query: 331 ---AGLQLDDIDLF-------EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGT 380
AGL DDID F I EA A +LGL EK+ VN G
Sbjct: 233 LEKAGLTPDDIDWFVPHQANLRIIEAVAK-------RLGLPEEKVVVN------LDRYGN 279
Query: 381 TGARCVATLLHEMKRRGRDCRFGVISMC-IGTGM--GAAAV 418
T A + L E G+ + ++ + G G+ GAA +
Sbjct: 280 TSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320
>gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional.
Length = 391
Score = 39.1 bits (92), Expect = 0.004
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 278 SDGAGAVLLMKRSVAMRKGLP----ILG------VFRTFAAVGVDPAIMGVGPAVAIPAA 327
+ GA A ++ A + GL I+ TF + ++G A
Sbjct: 214 TCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSM-IDLVGYDMTRAAAQQ 272
Query: 328 V-KSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE----------------KINVN-- 368
V + AG+ +DID+ E+++ F++ + LGL PE + VN
Sbjct: 273 VYEQAGIGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPS 332
Query: 369 GGALAIGHPLGTTG-ARC 385
GG L+ GHPLG TG A+C
Sbjct: 333 GGLLSKGHPLGATGLAQC 350
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)]
synthase III C terminal. This domain is found on
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
EC:2.3.1.41, the enzyme responsible for initiating the
chain of reactions of the fatty acid synthase in plants
and bacteria.
Length = 90
Score = 35.9 bits (84), Expect = 0.005
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 24/100 (24%)
Query: 331 AGLQLDDIDLF-------EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGA 383
AGL DDID F I +A A +LGL PEK+ VN + G T A
Sbjct: 4 AGLTPDDIDWFVPHQANLRIIDAVA-------KRLGLPPEKVVVN-----LDR-YGNTSA 50
Query: 384 RCVATLLHEMKRRGRDCRFGVISMCIGTGMG---AAAVFE 420
+ L E G+ ++ + G G G AAV
Sbjct: 51 ASIPLALDEAVEEGKLKPGDLVLLV-GFGAGLTWGAAVLR 89
>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty
acids into a large variety of different products, called
polyketides, by successive decarboxylating Claisen
condensations. PKSs can be divided into 2 groups,
modular type I PKSs consisting of one or more large
multifunctional proteins and iterative type II PKSs,
complexes of several monofunctional subunits.
Length = 421
Score = 38.7 bits (91), Expect = 0.005
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAV--GVDPAIM---GVGPAVAIPAAVKSAG 332
+G G V+L + S A+R G I V R A G I G A I A AG
Sbjct: 234 GEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAG 293
Query: 333 LQLDDIDLFE 342
+ DID E
Sbjct: 294 VDPSDIDYVE 303
>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP)
synthase (KAS), type I and II. KASs are responsible for
the elongation steps in fatty acid biosynthesis. KASIII
catalyses the initial condensation and KAS I and II
catalyze further elongation steps by Claisen
condensation of malonyl-acyl carrier protein (ACP) with
acyl-ACP.
Length = 406
Score = 38.3 bits (90), Expect = 0.006
Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 25/131 (19%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAG 332
+GAG ++L A +G I + A P G G A A+ AA+ AG
Sbjct: 230 GEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAG 289
Query: 333 LQLDDIDLFEIN------------EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGT 380
L +DID IN E+ A + V G +K+ V+ GH LG
Sbjct: 290 LSPEDIDY--INAHGTSTPLNDAAESKAIKRV-----FGEHAKKVPVSSTKSMTGHLLGA 342
Query: 381 TGA-RCVATLL 390
GA +ATLL
Sbjct: 343 AGAVEAIATLL 353
>gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional.
Length = 438
Score = 38.3 bits (89), Expect = 0.007
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 28/148 (18%)
Query: 275 SQVSDGAGAVLLMKRSVAMRKGL-----PILGVFRTFAAVG---VDP--AIMGVGPAVAI 324
SQVSDG ++L + GL ++ + A G DP A A
Sbjct: 256 SQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAA 315
Query: 325 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL-DPEK-----------------IN 366
A+ AG++ D+ + E+++ F + LG+ + +N
Sbjct: 316 QKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVN 375
Query: 367 VNGGALAIGHPLGTTGARCVATLLHEMK 394
GG L+ GHP+G TG + + + +MK
Sbjct: 376 TGGGLLSFGHPVGATGVKQIMEVYRQMK 403
>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a
subclass of decarboxylating condensing enzymes,
including beta-ketoacyl [ACP] synthase, type I and II
and polyketide synthases.They are characterized by the
utlization of acyl carrier protein (ACP) thioesters as
primer substrates, as well as the nature of their active
site residues.
Length = 407
Score = 38.2 bits (89), Expect = 0.007
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 13/130 (10%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILG--VFRTFAAVGVDPAIMGVGPAV--AIPAAVKSAGL 333
++GAG ++L + +A+ +G PI G G ++ G + AI A+ AGL
Sbjct: 230 AEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGL 289
Query: 334 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALA-------IGHPLGTTGARCV 386
LDD+D+ I+ S + E G L GH G GA +
Sbjct: 290 SLDDLDV--ISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQL 347
Query: 387 ATLLHEMKRR 396
L ++
Sbjct: 348 IGALQSLEHG 357
>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein].
Length = 323
Score = 36.8 bits (86), Expect = 0.015
Identities = 40/152 (26%), Positives = 51/152 (33%), Gaps = 44/152 (28%)
Query: 278 SDGAGAVLLMK-------RSVAMR---KGLPIL----GVFRTFAAVGVDPAIMGVGPAV- 322
DGAGAV+L + +L G T ++ G V
Sbjct: 159 GDGAGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVF 218
Query: 323 --AIPAAVKS-------AGLQLDDIDLF-------EINEAFASQFVYCRNKLGLDPEKIN 366
A+ A K+ AGL +DID F I EA A KLG+ EK+
Sbjct: 219 KFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIA-------KKLGIPEEKVV 271
Query: 367 VNGGALAIGHPLGTTGARCVATLLHEMKRRGR 398
V G T A + L E R GR
Sbjct: 272 VT------VDKYGNTSAASIPLALDEALREGR 297
>gnl|CDD|235785 PRK06365, PRK06365, acetyl-CoA acetyltransferase; Provisional.
Length = 430
Score = 36.0 bits (83), Expect = 0.036
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 20/90 (22%)
Query: 327 AVKSAGLQ--LDDIDLFEINEAFASQFVYCRNKLGL----------------DPEKINVN 368
A + AG+ L+D+DL E+++A+ S + LGL P K+ VN
Sbjct: 302 AYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVN 361
Query: 369 --GGALAIGHPLGTTGARCVATLLHEMKRR 396
GG LA GH +G TG + +++ R
Sbjct: 362 PSGGLLAAGHAVGATGIMQAVFMFWQLQGR 391
>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 411
Score = 35.1 bits (82), Expect = 0.057
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 20/120 (16%)
Query: 279 DGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGL 333
+GAG ++L + A +G I + G PA G G A A+ A+K AG+
Sbjct: 232 EGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGI 291
Query: 334 QLDDID----------LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGA 383
+DID + E A + V G K+ V+ GH LG GA
Sbjct: 292 NPEDIDYINAHGTSTPAGDKAETQAIKRV-----FGEHAYKVAVSSTKSMTGHLLGAAGA 346
>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II.
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II,
FabF) is involved in the condensation step of fatty acid
biosynthesis in which the malonyl donor group is
decarboxylated and the resulting carbanion used to
attack and extend the acyl group attached to the acyl
carrier protein. Most genomes encoding fatty acid
biosynthesis contain a number of condensing enzymes,
often of all three types: 1, 2 and 3. Synthase 2 is
mechanistically related to synthase 1 (KAS-I, FabB)
containing a number of absolutely conserved catalytic
residues in common. This model is based primarily on
genes which are found in apparent operons with other
essential genes of fatty acid biosynthesis
(GenProp0681). The large gap between the trusted cutoff
and the noise cutoff contains many genes which are not
found adjacent to genes of the fatty acid pathway in
genomes that often also contain a better hit to this
model. These genes may be involved in other processes
such as polyketide biosyntheses. Some genomes contain
more than one above-trusted hit to this model which may
result from recent paralogous expansions. Second hits to
this model which are not next to other fatty acid
biosynthesis genes may be involved in other processes.
FabB sequences should fall well below the noise cutoff
of this model [Fatty acid and phospholipid metabolism,
Biosynthesis].
Length = 407
Score = 33.2 bits (77), Expect = 0.27
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 313 PAIMGVGPAVAIPAAVKSAGLQLDDID----------LFEINEAFASQFVYCRNKLGLDP 362
PA G G A A+ AA+K AG+ +D+D L + E A + V G
Sbjct: 270 PAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRV-----FGDHA 324
Query: 363 EKINVNGGALAIGHPLGTTGA-RCVATLL 390
K+ V+ GH LG GA + T+L
Sbjct: 325 YKLAVSSTKSMTGHLLGAAGAIEAIFTVL 353
>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase. The structure of
beta-ketoacyl synthase is similar to that of the
thiolase family and also chalcone synthase. The active
site of beta-ketoacyl synthase is located between the N
and C-terminal domains.
Length = 298
Score = 31.9 bits (74), Expect = 0.59
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILGVFR 304
+G G V+L + S A+R G PIL V R
Sbjct: 161 GEGVGVVVLKRLSDALRDGDPILAVIR 187
>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 381
Score = 31.9 bits (73), Expect = 0.61
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 282 GAVLLMK-RSVAMRKGLPILGVFRTF-----AAVGVDPAIMGVGPAVAIPAAVKSAGLQL 335
GA+L+++ +A ++G I G F A P G AI + +GL
Sbjct: 212 GAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTP 271
Query: 336 DDIDLF-------EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVA 387
+DID +N+ + + L P ++ V+ A GH LG +GA VA
Sbjct: 272 EDIDYIHAHGTATRLNDQREANLIQ-----ALFPHRVAVSSTKGATGHTLGASGALGVA 325
>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III;
Reviewed.
Length = 319
Score = 31.6 bits (73), Expect = 0.77
Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 30/104 (28%)
Query: 302 VFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF-------EINEAFASQFVYC 354
VF+ FA + A+++AGL +DID I +A A
Sbjct: 213 VFK-FAVRELAKVAR---------EALEAAGLTPEDIDWLVPHQANLRIIDATA------ 256
Query: 355 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR 398
KLGL EK+ V + G T A + L E R GR
Sbjct: 257 -KKLGLPMEKVVVT-----VDK-YGNTSAASIPLALDEAVRDGR 293
>gnl|CDD|235715 PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protein) synthase;
Validated.
Length = 348
Score = 31.1 bits (71), Expect = 1.1
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 14/72 (19%)
Query: 279 DGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---------IMGVGPAVAIPAAVK 329
+ A AVLL + + GLP+LG+ +G +PA + G G AI AA+
Sbjct: 191 EAAAAVLLGRPAGGEAPGLPLLGL-----GLGREPAPVGESEDLPLRGDGLTQAIRAALA 245
Query: 330 SAGLQLDDIDLF 341
AG L+D+D
Sbjct: 246 EAGCGLEDMDYR 257
>gnl|CDD|180373 PRK06059, PRK06059, lipid-transfer protein; Provisional.
Length = 399
Score = 30.1 bits (68), Expect = 2.7
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 21/88 (23%)
Query: 277 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI---------MGVGPAVAIPAA 327
SDGA A+++ +S A R + GV A V P + A+PA
Sbjct: 211 TSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAP 270
Query: 328 VKS------------AGLQLDDIDLFEI 343
+ AG+ +D+ L E+
Sbjct: 271 ERVFKDQILDAAYAEAGIGPEDLSLAEV 298
Score = 29.7 bits (67), Expect = 3.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGSV 162
PV + C+SG QA+ A I AG D+ V
Sbjct: 76 APVSSSYAACASGSQALQSARAQILAGLCDVALV 109
>gnl|CDD|225620 COG3078, COG3078, Uncharacterized protein conserved in bacteria
[Function unknown].
Length = 169
Score = 28.7 bits (64), Expect = 4.4
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 193 TRKEQDQAAVDSHRK------AAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDG 246
TR+E D A D R+ A+ + +G ++ + DP+ G +KP+ + V +
Sbjct: 22 TREELDAEARDRKRQKKRKGLASGSRHSGGNENSGNKQQNQKKDPRIGSKKPIPLGVTEK 81
Query: 247 I-RPNTSVSELAKLKP 261
+ + + SE KL P
Sbjct: 82 VTKQHKPKSEKPKLSP 97
>gnl|CDD|234351 TIGR03773, anch_rpt_wall, putative ABC transporter-associated
repeat protein. Members of this protein family occur in
genomes that contain a three-gene ABC transporter operon
associated with the presence of domain TIGR03769. That
domain occurs as a single-copy insert in the
substrate-binding protein, and occurs in two or more
copies in members of this protein family. Members of
this family typically are encoded adjacent to the said
transporter operon and may serve as a substrate
receptor.
Length = 513
Score = 29.5 bits (66), Expect = 4.5
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 212 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 271
+ G +K ++ AT K D +T +V D P +V L+ P G
Sbjct: 408 SKPGTYKLQVTQSATTTNGKKASDTTTLTFAVGDNNDPVGAVGPLSASTPTDGAPGGKGC 467
Query: 272 GNSSQ--VSDGAGA 283
+++ G A
Sbjct: 468 ELAAKGAEGSGKKA 481
>gnl|CDD|236374 PRK09077, PRK09077, L-aspartate oxidase; Provisional.
Length = 536
Score = 29.1 bits (66), Expect = 6.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 391 HEMKRRGRDCRFGVIS 406
HEMKR G DC + IS
Sbjct: 298 HEMKRLGADCVYLDIS 313
>gnl|CDD|106976 PHA00667, PHA00667, hypothetical protein.
Length = 158
Score = 28.1 bits (61), Expect = 6.3
Identities = 8/53 (15%), Positives = 12/53 (22%)
Query: 195 KEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGI 247
+ AA A + + D GD P D +
Sbjct: 61 AATAPTPPTAEVGAADAPESKAENSAPVQAGDAGQDAAAGDAAPTYQDTADAV 113
>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes;
Family of enzymes that catalyze the formation of a new
carbon-carbon bond by a decarboxylating Claisen-like
condensation reaction. Members are involved in the
synthesis of fatty acids and polyketides, a diverse
group of natural products. Both pathways are an
iterative series of additions of small carbon units,
usually acetate, to a nascent acyl group. There are 2
classes of decarboxylating condensing enzymes, which can
be distinguished by sequence similarity, type of active
site residues and type of primer units (acetyl CoA or
acyl carrier protein (ACP) linked units).
Length = 332
Score = 28.8 bits (64), Expect = 6.4
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 279 DGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV------GPAVAIPAAVKSAG 332
DGAGA+++ + A+ +G I AA +D A MG G A A A+ AG
Sbjct: 161 DGAGALVVEELEHALARGAHIYAEIVGTAA-TIDGAGMGAFAPSAEGLARAAKEALAVAG 219
Query: 333 LQLDDIDLFE 342
L + DID
Sbjct: 220 LTVWDIDYLV 229
>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein
synthase; Validated.
Length = 410
Score = 28.8 bits (65), Expect = 6.4
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 280 GAGAVLLMKRSVAMRKGLPILGVFRTFAAV-----GVDPAIMGVGPAVAIPAAVKSAGLQ 334
GAV+L A R+G ++ G DP++ G I AA++ AGL
Sbjct: 240 ACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSL--EGEMRVIRAALRRAGLG 297
Query: 335 LDDID 339
+DID
Sbjct: 298 PEDID 302
>gnl|CDD|178189 PLN02577, PLN02577, hydroxymethylglutaryl-CoA synthase.
Length = 459
Score = 28.6 bits (64), Expect = 6.9
Identities = 10/23 (43%), Positives = 19/23 (82%)
Query: 82 VLKAVIEKTNVDPSEVGDIVVGT 104
V+K+++EK N+DP ++G + VG+
Sbjct: 60 VVKSLLEKYNIDPKQIGRLEVGS 82
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins
[Secondary metabolites biosynthesis, transport, and
catabolism].
Length = 1061
Score = 29.0 bits (65), Expect = 7.0
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 278 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV----GPAVA--IPAAVKSA 331
+GAG V+L + S A R G I V R +AV D G+ A A I A+ A
Sbjct: 238 GEGAGVVVLKRLSDAERDGDRIYAVIR-GSAVNQDGRSNGLTAPNLEAQADVIREALADA 296
Query: 332 GLQLDDIDLFE 342
G+ + E
Sbjct: 297 GIDPATVQYVE 307
>gnl|CDD|180434 PRK06158, PRK06158, thiolase; Provisional.
Length = 384
Score = 28.5 bits (64), Expect = 7.1
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 33/129 (25%)
Query: 277 VSDGAGAVLLMKRSVAM---RKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKS--- 330
V+DGAGAV++++ A R + +LG AA + P + + AA +S
Sbjct: 208 VTDGAGAVVMVRADRARDLPRPPVYVLG-----AAAATWHRQISSMPDLTVTAAAESGPR 262
Query: 331 ----AGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVN 368
AGL DID+ E+ +AF + LG + +N N
Sbjct: 263 AFAMAGLTPADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTN 322
Query: 369 GGALAIGHP 377
GG L+ HP
Sbjct: 323 GGGLSCVHP 331
>gnl|CDD|240032 cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase
superfamily catalyze the hydrolysis of NUcleoside
DIphosphates linked to other moieties, X. Enzymes
belonging to this superfamily require a divalent cation,
such as Mg2+ or Mn2+, for their activity and contain a
highly conserved 23-residue nudix motif
(GX5EX7REUXEEXGU, where U = I, L or V), which functions
as a metal binding and catalytic site. Substrates of
nudix hydrolases include intact and oxidatively damaged
nucleoside triphosphates, dinucleoside polyphosphates,
nucleotide-sugars and dinucleotide enzymes. These
substrates are metabolites or cell signaling molecules
that require regulation during different stages of the
cell cycle or during periods of stress. In general, the
role of the nudix hydrolase is to sanitize the
nucleotide pools and to maintain cell viability, thereby
serving as surveillance & "house-cleaning" enzymes.
Substrate specificity is used to define families within
the superfamily. Differences in substrate specificity
are determined by the N-terminal extension or by
residues in variable loop regions. Mechanistically,
substrate hydrolysis occurs by a nucleophilic
substitution reaction, with variation in the numbers and
roles of divalent cations required.
Length = 129
Score = 27.3 bits (61), Expect = 7.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 277 VSDGAGAVLLMKRSVAMRKGLP 298
V D G VLL++RS LP
Sbjct: 9 VRDDEGRVLLIRRSDNGLWALP 30
>gnl|CDD|179420 PRK02399, PRK02399, hypothetical protein; Provisional.
Length = 406
Score = 28.7 bits (65), Expect = 7.8
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 23/72 (31%)
Query: 83 LKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP---------------- 126
+ V++ T +EV D + G VLA G R AA G P
Sbjct: 237 IAGVLDLT---TTEVCDELFGGVLAAGPDRL----EAAARTGIPQVVSPGALDMVNFGAP 289
Query: 127 ETVPVRTVNRQC 138
+TVP + R
Sbjct: 290 DTVPEKFRGRLL 301
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.318 0.133 0.381
Gapped
Lambda K H
0.267 0.0940 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 22,645,678
Number of extensions: 2246707
Number of successful extensions: 2646
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2439
Number of HSP's successfully gapped: 120
Length of query: 445
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 345
Effective length of database: 6,502,202
Effective search space: 2243259690
Effective search space used: 2243259690
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (26.9 bits)